BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy7460
         (1026 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|358339354|dbj|GAA47434.1| cathepsin F [Clonorchis sinensis]
          Length = 603

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 188/601 (31%), Positives = 293/601 (48%), Gaps = 61/601 (10%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           D +DWR+    GP  +Q  CGSCWAFS  G +EGQ+ +K+G+L+  S  Q+++C     G
Sbjct: 41  DNFDWRQHGAVGPVWNQGPCGSCWAFSAVGNIEGQWFLKSGELLHLSVQQVLDCDHVDHG 100

Query: 73  CDGCFFEPSI--EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 130
           C+G +  P +  +     GL+ + DY YK A G   KC  D+SK + +     +     +
Sbjct: 101 CNGGY-PPQVYRQVNQMGGLQLDADYSYKAAVG---KCHTDRSKFRAYVNSSVILSQNEQ 156

Query: 131 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 190
                L   GPL+  LN+  +  Y    +      C+P  L HAVL VGYG +  +PYW+
Sbjct: 157 FQANKLKTIGPLASTLNARTLQFYRKGIMHPTPSACNPGQLNHAVLTVGYGTEQGMPYWI 216

Query: 191 VRNSWGPIGPDEGFFKIERG--NNACGIEQIAGYATIDVVIQRL----VLEKKAIMLIQA 244
           V+NSW       GF +  R    +      I G++ + +   +L    +LE K++ L ++
Sbjct: 217 VKNSW-----SRGFGEQVRAIWQHLRSRASIMGWSNLALKALQLQGDHLLENKSMKLFRS 271

Query: 245 VFLLCGVASC----LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRG 300
            +L+  ++ C    L L  L  R T                T + EN  + ++ F  K  
Sbjct: 272 RYLMMRISICYLFTLELWCLCARTT----------------TPEPENARQLYEEFKQKYK 315

Query: 301 RQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCK-TGFKWSE 350
           + Y ND++ + RF  FK++  + H+          YG ++F D + +E   +  GFK+ +
Sbjct: 316 KTYVNDDD-EYRFSVFKENLLRAHQLQTMEQGTAEYGVTQFFDLTSQEFQIQYLGFKYED 374

Query: 351 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 410
                 + D E++      V  +    D++DWR     GP  DQ  CGSCWAFS  G +E
Sbjct: 375 ------MQDTEEMSPSTRVVMDE----DSFDWRDHGAVGPVLDQGKCGSCWAFSTIGNIE 424

Query: 411 GQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGE 470
           GQ+ +KTG+L+  S+ QL++C     GC G    +         GLE   DYPY+     
Sbjct: 425 GQWFLKTGELLSLSEQQLIDCDNVDEGCNGGYPPKTYGAVIKMGGLELNSDYPYK---AL 481

Query: 471 KFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDE 530
             KC  D+ K+K++     ++        + L   GPLS  LN++ + FY    +     
Sbjct: 482 AEKCHMDRQKLKVYINDSVVFPRNEHLQAEALKLMGPLSSALNANPLKFYKTGIMHLPVA 541

Query: 531 TCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 590
           +C P  L HAVL VGYG ++ +PYW  +NSWG    ++G+F+I RG   CGI ++   A 
Sbjct: 542 SCFPRALNHAVLTVGYGTENGLPYWTVKNSWGTAFGEDGYFRIYRGGGTCGINRLVSTAA 601

Query: 591 I 591
           I
Sbjct: 602 I 602



 Score =  298 bits (764), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 190/602 (31%), Positives = 293/602 (48%), Gaps = 63/602 (10%)

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
           D +DWR+    GP  +Q  CGSCWAFS  G +EGQ+ +K+G+L+  S  Q+++C     G
Sbjct: 41  DNFDWRQHGAVGPVWNQGPCGSCWAFSAVGNIEGQWFLKSGELLHLSVQQVLDCDHVDHG 100

Query: 438 CGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET 497
           C G    +   +     GL+ + DY Y+   G   KC  D+SK + +     +     + 
Sbjct: 101 CNGGYPPQVYRQVNQMGGLQLDADYSYKAAVG---KCHTDRSKFRAYVNSSVILSQNEQF 157

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLA 557
               L   GPL+  LN+  + FY    +      C+P  L HAVL VGYG +  +PYW+ 
Sbjct: 158 QANKLKTIGPLASTLNARTLQFYRKGIMHPTPSACNPGQLNHAVLTVGYGTEQGMPYWIV 217

Query: 558 RNSWGPIGPDEGFFKIERG--NNACGIEQIAGYATIDVVIQRL----VLEKKAIMLIQAV 611
           +NSW       GF +  R    +      I G++ + +   +L    +LE K++ L ++ 
Sbjct: 218 KNSW-----SRGFGEQVRAIWQHLRSRASIMGWSNLALKALQLQGDHLLENKSMKLFRSR 272

Query: 612 FLLCGVASC----LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGR 667
           +L+  ++ C    L L  L  R T                T + EN  + ++ F  K  +
Sbjct: 273 YLMMRISICYLFTLELWCLCARTT----------------TPEPENARQLYEEFKQKYKK 316

Query: 668 QYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCK-TGFKWSER 717
            Y ND++ + RF  FK++  + H+          YG ++F D + +E   +  GFK+ + 
Sbjct: 317 TYVNDDD-EYRFSVFKENLLRAHQLQTMEQGTAEYGVTQFFDLTSQEFQIQYLGFKYED- 374

Query: 718 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEG 777
                + D E++      V  +    D++DWR     GP  DQ  CGSCWAFS  G +EG
Sbjct: 375 -----MQDTEEMSPSTRVVMDE----DSFDWRDHGAVGPVLDQGKCGSCWAFSTIGNIEG 425

Query: 778 QYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANG 834
           Q+ +KTG+L+  S+ QL++C     GC+G +  P   Y       GLE   DYPYK A  
Sbjct: 426 QWFLKTGELLSLSEQQLIDCDNVDEGCNGGY--PPKTYGAVIKMGGLELNSDYPYK-ALA 482

Query: 835 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 894
           EK  C  D+ K+K++     +         + L   GPLS  LN++ +  Y    +    
Sbjct: 483 EK--CHMDRQKLKVYINDSVVFPRNEHLQAEALKLMGPLSSALNANPLKFYKTGIMHLPV 540

Query: 895 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 954
            +C P  L HAVL VGYG ++ +PYW V+NSWG    ++G+F+I RG   CGI ++   A
Sbjct: 541 ASCFPRALNHAVLTVGYGTENGLPYWTVKNSWGTAFGEDGYFRIYRGGGTCGINRLVSTA 600

Query: 955 TI 956
            I
Sbjct: 601 AI 602



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 40/61 (65%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C P  L HAVL VGYG ++ +PYW V+NSWG    ++G+F+I RG   CGI ++   A 
Sbjct: 542  SCFPRALNHAVLTVGYGTENGLPYWTVKNSWGTAFGEDGYFRIYRGGGTCGINRLVSTAA 601

Query: 1024 I 1024
            I
Sbjct: 602  I 602



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)

Query: 964 TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSW 994
            C+P  L HAVL VGYG +  +PYW+V+NSW
Sbjct: 191 ACNPGQLNHAVLTVGYGTEQGMPYWIVKNSW 221


>gi|391333248|ref|XP_003741031.1| PREDICTED: uncharacterized protein LOC100898636 [Metaseiulus
           occidentalis]
          Length = 642

 Score =  245 bits (626), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 194/712 (27%), Positives = 315/712 (44%), Gaps = 95/712 (13%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------- 317
           ++ R+ TL I    T+ +    E +K      G+ Y  +EE   R  + K          
Sbjct: 1   MILRLATLVIVLKFTYAD---WELYKRI---HGKSYDVEEESMRRRIFEKNVAMINAHNL 54

Query: 318 -QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV 376
             D  +   R G S  +D +P E+       ++       + ++   +  L  +++   +
Sbjct: 55  LHDLKQVSYRMGLSRLTDATPAEVQALKCLNFT-------LPNKTSRKSTLGTLQRQ-DL 106

Query: 377 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 436
           P+A DW ++    P  DQ  CG+CW F+  G +EGQ+   TG LV  S+  +++C K  +
Sbjct: 107 PEAVDWTQQGYVTPVKDQGKCGACWTFAATGAIEGQHFKATGNLVSLSEQNILDCVKTAT 166

Query: 437 --GCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVK-LFTGKDFLYFN 493
             GC G   +E      +  G+++E+ YPY    G    C + +  V    +G   +   
Sbjct: 167 SNGCSGGLFVEAFDYLKNSGGIDAEESYPYEASGG---TCRFRQDSVAATVSGYQAISAG 223

Query: 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIP 553
               +++ +   GP+SVG++S    F + T     +  C+ + L HAVL+VGYG ++   
Sbjct: 224 NEAELQEAVATIGPISVGIDSGHPGFQHYTGGIYYEPECTEH-LSHAVLVVGYGTENGED 282

Query: 554 YWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVVIQRLVLEKKAIMLIQAVF 612
           YWL +NSWG     +G+ K+ R  NN CGI   A Y    + +  LV+  K       ++
Sbjct: 283 YWLVKNSWGASYGLQGYIKMARNRNNNCGIATGAAYPITMLCVAALVVLLKFSHADWDLY 342

Query: 613 LLC-----GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGR 667
                   GVA      S+  RI ++ VA ++             N+L   K        
Sbjct: 343 KRVQNKNYGVAE----DSMRRRIFEKNVAMIN-----------GHNLLHDLK-------- 379

Query: 668 QYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE 727
                     R  Y          R G S F+D +PEE+        +      +     
Sbjct: 380 ----------RVSY----------RMGLSRFTDSTPEEMRAMRCLNIN------VSMTTG 413

Query: 728 KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLV 787
              + + +  +   + +A DWR++    P  +Q  CGSCWAFS  G +EGQ+   TG+L 
Sbjct: 414 GPHEEVFDAIESSDLSEAIDWRQQGYVTPVKNQGNCGSCWAFSATGAVEGQHFKATGRLE 473

Query: 788 EFSKSQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV 846
             S+  LV+C K+  GCDG FFE + +Y     G+ +E  YPY+  +G    C + +  +
Sbjct: 474 SLSEQNLVDCVKESKGCDGGFFEQAFQYIKDNGGINTEDSYPYEAFDG---SCRFREDSI 530

Query: 847 -KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 905
               +G   +       ++K +   GP+SV ++       N       + +CS  +L HA
Sbjct: 531 GATVSGYQTIPKGSEADLQKAVSTIGPISVAIDVSNPSFQNYREGVYYEPSCSSSNLDHA 590

Query: 906 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER--GNNACGIEQIAGYAT 955
           VL+VGYG      YWLV+NSWG    ++G+ ++ R  GNN CGI   A Y T
Sbjct: 591 VLVVGYGSDGGEDYWLVKNSWGTSFGEQGYVRMARNKGNN-CGIASAAAYPT 641



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 174/596 (29%), Positives = 272/596 (45%), Gaps = 76/596 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+A DW ++    P  DQ  CG+CW F+  G +EGQ+   TG LV  S+  +++C K  
Sbjct: 106 LPEAVDWTQQGYVTPVKDQGKCGACWTFAATGAIEGQHFKATGNLVSLSEQNILDCVKTA 165

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHF 126
           +  GC G  F  + +Y  +  G+++E+ YPY+ + G    C + +  V    +G   +  
Sbjct: 166 TSNGCSGGLFVEAFDYLKNSGGIDAEESYPYEASGG---TCRFRQDSVAATVSGYQAISA 222

Query: 127 NGSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
                +++ +   GP+SV ++S       Y G    + +  C+ + L HAVL+VGYG ++
Sbjct: 223 GNEAELQEAVATIGPISVGIDSGHPGFQHYTGGIYYEPE--CTEH-LSHAVLVVGYGTEN 279

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVVIQRLVLEKKAIMLIQ 243
              YWLV+NSWG     +G+ K+ R  NN CGI   A Y    + +  LV+  K      
Sbjct: 280 GEDYWLVKNSWGASYGLQGYIKMARNRNNNCGIATGAAYPITMLCVAALVVLLKFSHADW 339

Query: 244 AVFLLC-----GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVK 298
            ++        GVA      S+  RI ++ VA +           +  N+L   K     
Sbjct: 340 DLYKRVQNKNYGVAE----DSMRRRIFEKNVAMI-----------NGHNLLHDLK----- 379

Query: 299 RGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVA 358
                        R  Y          R G S F+D +PEE+        +      +  
Sbjct: 380 -------------RVSY----------RMGLSRFTDSTPEEMRAMRCLNIN------VSM 410

Query: 359 DREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTG 418
                 + + +  +   + +A DWR++    P  +Q  CGSCWAFS  G +EGQ+   TG
Sbjct: 411 TTGGPHEEVFDAIESSDLSEAIDWRQQGYVTPVKNQGNCGSCWAFSATGAVEGQHFKATG 470

Query: 419 KLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYD 477
           +L   S+  LV+C K+  GC G    EQ  +Y     G+ +E  YPY   +G    C + 
Sbjct: 471 RLESLSEQNLVDCVKESKGCDG-GFFEQAFQYIKDNGGINTEDSYPYEAFDG---SCRFR 526

Query: 478 KSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYD 536
           +  +            GSE  ++K +   GP+SV ++     F N       + +CS  +
Sbjct: 527 EDSIGATVSGYQTIPKGSEADLQKAVSTIGPISVAIDVSNPSFQNYREGVYYEPSCSSSN 586

Query: 537 LGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER--GNNACGIEQIAGYAT 590
           L HAVL+VGYG      YWL +NSWG    ++G+ ++ R  GNN CGI   A Y T
Sbjct: 587 LDHAVLVVGYGSDGGEDYWLVKNSWGTSFGEQGYVRMARNKGNN-CGIASAAAYPT 641



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 3/62 (4%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER--GNNACGIEQIAGY 1021
            +CS  +L HAVL+VGYG      YWLV+NSWG    ++G+ ++ R  GNN CGI   A Y
Sbjct: 581  SCSSSNLDHAVLVVGYGSDGGEDYWLVKNSWGTSFGEQGYVRMARNKGNN-CGIASAAAY 639

Query: 1022 AT 1023
             T
Sbjct: 640  PT 641



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 1021
            L HAVL+VGYG ++   YWLV+NSWG     +G+ K+ R  NN CGI   A Y
Sbjct: 266  LSHAVLVVGYGTENGEDYWLVKNSWGASYGLQGYIKMARNRNNNCGIATGAAY 318


>gi|357619726|gb|EHJ72185.1| cathepsin [Danaus plexippus]
          Length = 1118

 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 160/452 (35%), Positives = 227/452 (50%), Gaps = 67/452 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD +DWRKK V     +Q  CGSCWAFS A  +E  +AIKTGKL++ S+ QL++C K  
Sbjct: 54  APDQFDWRKKGVVSSIKNQKHCGSCWAFSAAANVESIHAIKTGKLIDVSEQQLLDCDKYD 113

Query: 71  SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--G 128
           SGC G     ++ Y    G  S K YPY    G   KC YD SKV++   K++ H     
Sbjct: 114 SGCSGGLPWDALRYFVANGAMSLKSYPYVAKEG---KCRYDSSKVEIRL-KEYKHKEKLS 169

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +K+ LY  GPLS+ + S  +  YNG  +   +E    Y + HAVLLVGYGK++ + Y
Sbjct: 170 EDQIKEHLYNIGPLSIAITSSPLASYNGGILI--EECHRSYLINHAVLLVGYGKENGVKY 227

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQRLVLEKKAIMLIQAVFLL 248
           W+V+NSWG    + G+F+++ G N              + ++  V E++ +         
Sbjct: 228 WIVKNSWGQNWGENGYFRMKMGVNCL------------LRVRSKVTEQQPVDYDIWDEGC 275

Query: 249 CGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEE 308
            G    L +  L  R       R+ +L    +L          F+ FI    ++Y ++ E
Sbjct: 276 SGGMQWLAIRELGQR-------RLYSLEEAPTL----------FEQFIKDYNKEY-DESE 317

Query: 309 IKERFEYFK---QDGHKKHER-----YGTSEFSDRSPEE-ILCKTGFKWSERTYERIVAD 359
            +ERF+ F    +D +  +ER     YG ++FSD S EE I   TG K            
Sbjct: 318 KEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKYYTGLK------------ 365

Query: 360 REKVEKMLMEVEKDGP------VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQY 413
           R++          D P       PD +DWRKK V     +Q  CGSCWAFS A  +E  +
Sbjct: 366 RDRCTTTEHHKSTDLPKSFNITAPDQFDWRKKGVVSSVKNQRHCGSCWAFSAAANVESIH 425

Query: 414 AIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
           AIKTGKL++ S+ QL++C K  SGC G  GLE
Sbjct: 426 AIKTGKLIDVSEQQLLDCDKYDSGCSG--GLE 455



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 172/501 (34%), Positives = 244/501 (48%), Gaps = 79/501 (15%)

Query: 327 YGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           YG ++FSD S EE +   TG K  E          E  +K  +    +   PD +DWRKK
Sbjct: 10  YGINKFSDLSKEEFVKYYTGLKREES------PSNEDHKKTDLPESFNVTAPDQFDWRKK 63

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
            V     +Q  CGSCWAFS A  +E  +AIKTGKL++ S+ QL++C K  SGC G  GL 
Sbjct: 64  GVVSSIKNQKHCGSCWAFSAAANVESIHAIKTGKLIDVSEQQLLDCDKYDSGCSG--GLP 121

Query: 446 -QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKL----FTGKDFLYFNGSETMKK 500
              + Y    G  S K YPY    G   KC YD SKV++    +  K+ L     + +K+
Sbjct: 122 WDALRYFVANGAMSLKSYPYVAKEG---KCRYDSSKVEIRLKEYKHKEKL---SEDQIKE 175

Query: 501 ILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNS 560
            LY  GPLS+ + S  +  YNG  +   +E    Y + HAVLLVGYGK++ + YW+ +NS
Sbjct: 176 HLYNIGPLSIAITSSPLASYNGGILI--EECHRSYLINHAVLLVGYGKENGVKYWIVKNS 233

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQRLVLEKKAIMLIQAVFLLCGVASC 620
           WG    + G+F+++ G N              + ++  V E++ +          G    
Sbjct: 234 WGQNWGENGYFRMKMGVNCL------------LRVRSKVTEQQPVDYDIWDEGCSGGMQW 281

Query: 621 LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFE 680
           L +  L  R       R+ +L    +L          F+ FI    ++Y ++ E +ERF+
Sbjct: 282 LAIRELGQR-------RLYSLEEAPTL----------FEQFIKDYNKEY-DESEKEERFK 323

Query: 681 YFK---QDGHKKHER-----YGTSEFSDRSPEE-ILCKTGFKWSERTYERIVADREKVEK 731
            F    +D +  +ER     YG ++FSD S EE I   TG K            R++   
Sbjct: 324 IFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKYYTGLK------------RDRCTT 371

Query: 732 MLMEVEKDGP------VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 785
                  D P       PD +DWRKK V     +Q  CGSCWAFS A  +E  +AIKTGK
Sbjct: 372 TEHHKSTDLPKSFNITAPDQFDWRKKGVVSSVKNQRHCGSCWAFSAAANVESIHAIKTGK 431

Query: 786 LVEFSKSQLVECAKQCSGCDG 806
           L++ S+ QL++C K  SGC G
Sbjct: 432 LIDVSEQQLLDCDKYDSGCSG 452



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/299 (37%), Positives = 162/299 (54%), Gaps = 25/299 (8%)

Query: 292  FKAFIVKRGRQYANDEEIKERFEYFK---QDGHKKHER-----YGTSEFSDRSPEEIL-C 342
            F+ FI    ++Y ++ E +ERF+ F    +D +  +ER     YG ++FSD S +E +  
Sbjct: 819  FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKDEFVKF 877

Query: 343  KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
             TG K  E          E  +K  +    +   PD +DWRKK V      Q  C SCWA
Sbjct: 878  YTGLKREES------PSNEDHKKTDLPKSFNVTAPDQFDWRKKGVVSSVKFQGHCVSCWA 931

Query: 403  FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC-GGCDGLEQPIEYTHQAGLESEKD 461
            FS+AG +E   AIKTGKL++ S+ QLV+C +   GC GG    +    Y H+ G  S + 
Sbjct: 932  FSVAGNVESINAIKTGKLIDVSEQQLVDCDEWNFGCSGGIACSKSHFSYFHKKGAMSLES 991

Query: 462  YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG--SETMKKILYKYGPLSVGLNSHLIHF 519
            YPY    G+   C Y+ SKV +   KD+ YF     + +K+ LY  GPLS+ ++S  IH 
Sbjct: 992  YPYVGKEGQ---CRYNSSKV-VIRLKDYQYFIALSEDEIKEYLYNIGPLSIDIDSSQIHH 1047

Query: 520  YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y G  + K  E        HAVLLVGYGK++ + YW+ +NSWG    ++G+F+I+RG N
Sbjct: 1048 YKGGIVIK--ECQEVKKTNHAVLLVGYGKENGVEYWIVKNSWGQNWGEKGYFRIQRGVN 1104



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/299 (37%), Positives = 162/299 (54%), Gaps = 26/299 (8%)

Query: 658  FKAFIVKRGRQYANDEEIKERFEYFK---QDGHKKHER-----YGTSEFSDRSPEEIL-C 708
            F+ FI    ++Y ++ E +ERF+ F    +D +  +ER     YG ++FSD S +E +  
Sbjct: 819  FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKDEFVKF 877

Query: 709  KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
             TG K  E          E  +K  +    +   PD +DWRKK V      Q  C SCWA
Sbjct: 878  YTGLKREES------PSNEDHKKTDLPKSFNVTAPDQFDWRKKGVVSSVKFQGHCVSCWA 931

Query: 769  FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFF--EPSIEYTHQAGLESEKD 826
            FS+AG +E   AIKTGKL++ S+ QLV+C +   GC G     +    Y H+ G  S + 
Sbjct: 932  FSVAGNVESINAIKTGKLIDVSEQQLVDCDEWNFGCSGGIACSKSHFSYFHKKGAMSLES 991

Query: 827  YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETMKKILYKYGPLSVLLNSDLIHD 884
            YPY    G+   C Y+ SKV +   KD+ +F     + +K+ LY  GPLS+ ++S  IH 
Sbjct: 992  YPYVGKEGQ---CRYNSSKV-VIRLKDYQYFIALSEDEIKEYLYNIGPLSIDIDSSQIHH 1047

Query: 885  YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
            Y G  + K  E        HAVLLVGYGK++ + YW+V+NSWG    ++G+F+I+RG N
Sbjct: 1048 YKGGIVIK--ECQEVKKTNHAVLLVGYGKENGVEYWIVKNSWGQNWGEKGYFRIQRGVN 1104



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/254 (39%), Positives = 140/254 (55%), Gaps = 15/254 (5%)

Query: 693 YGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           YG ++FSD S EE +   TG K  E          E  +K  +    +   PD +DWRKK
Sbjct: 10  YGINKFSDLSKEEFVKYYTGLKREES------PSNEDHKKTDLPESFNVTAPDQFDWRKK 63

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
            V     +Q  CGSCWAFS A  +E  +AIKTGKL++ S+ QL++C K  SGC G     
Sbjct: 64  GVVSSIKNQKHCGSCWAFSAAANVESIHAIKTGKLIDVSEQQLLDCDKYDSGCSGGLPWD 123

Query: 812 SIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYK 869
           ++ Y    G  S K YPY    G   KC YD SKV++   K++ H      + +K+ LY 
Sbjct: 124 ALRYFVANGAMSLKSYPYVAKEG---KCRYDSSKVEIRL-KEYKHKEKLSEDQIKEHLYN 179

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GPLS+ + S  +  YNG  +   +E    Y + HAVLLVGYGK++ + YW+V+NSWG  
Sbjct: 180 IGPLSIAITSSPLASYNGGILI--EECHRSYLINHAVLLVGYGKENGVKYWIVKNSWGQN 237

Query: 930 GPDEGFFKIERGNN 943
             + G+F+++ G N
Sbjct: 238 WGENGYFRMKMGVN 251



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/285 (38%), Positives = 150/285 (52%), Gaps = 26/285 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK---QDGHKKHER-----YGTSEFSDRSPEE-ILC 708
           F+ FI    ++Y ++ E +ERF+ F    +D +  +ER     YG ++FSD S EE I  
Sbjct: 519 FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKY 577

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
            TG K  E          E  +K  +    +   PD +DWRKK V     +Q  CGSCWA
Sbjct: 578 YTGLKREES------PSNEDHKKTDLPESFNVTAPDQFDWRKKGVVSSIKNQKHCGSCWA 631

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYP 828
           FS AG +E  +AIKTGKLV  S+ QLV+C  Q SGC G     ++ Y    G  S K YP
Sbjct: 632 FSAAGNVESIHAIKTGKLVHVSEQQLVDCDSQDSGCSGGLTWNAMRYFRTNGAVSLKSYP 691

Query: 829 YKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVLLNSDLIHDYN 886
           Y   N     C YD +KV +   KD+ H      + +K+ LY  G LS+ + S  +  Y 
Sbjct: 692 YVAQNE---NCRYDSNKV-VIRLKDYKHITQLSEDQIKEHLYNIGLLSIDITSTQLTWYE 747

Query: 887 GTPIRKNDETCSPYDL-GHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           G  +    E C   DL  HAVLLV YGK++++ YW+V+NSWG  G
Sbjct: 748 GGILI---EECRRSDLVDHAVLLVEYGKENSVEYWIVKNSWGQNG 789



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/206 (42%), Positives = 120/206 (58%), Gaps = 10/206 (4%)

Query: 11   VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
             PD +DWRKK V      Q  C SCWAFS+AG +E   AIKTGKL++ S+ QLV+C +  
Sbjct: 905  APDQFDWRKKGVVSSVKFQGHCVSCWAFSVAGNVESINAIKTGKLIDVSEQQLVDCDEWN 964

Query: 71   SGCDGCFF--EPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
             GC G     +    Y H+ G  S + YPY    G+   C Y+ SKV +   KD+ +F  
Sbjct: 965  FGCSGGIACSKSHFSYFHKKGAMSLESYPYVGKEGQ---CRYNSSKV-VIRLKDYQYFIA 1020

Query: 129  --SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
               + +K+ LY  GPLS+ ++S  IH Y G  + K  E        HAVLLVGYGK++ +
Sbjct: 1021 LSEDEIKEYLYNIGPLSIDIDSSQIHHYKGGIVIK--ECQEVKKTNHAVLLVGYGKENGV 1078

Query: 187  PYWLVRNSWGPIGPDEGFFKIERGNN 212
             YW+V+NSWG    ++G+F+I+RG N
Sbjct: 1079 EYWIVKNSWGQNWGEKGYFRIQRGVN 1104



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/287 (38%), Positives = 150/287 (52%), Gaps = 29/287 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK---QDGHKKHER-----YGTSEFSDRSPEE-ILC 342
           F+ FI    ++Y ++ E +ERF+ F    +D +  +ER     YG ++FSD S EE I  
Sbjct: 519 FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKY 577

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
            TG K  E          E  +K  +    +   PD +DWRKK V     +Q  CGSCWA
Sbjct: 578 YTGLKREES------PSNEDHKKTDLPESFNVTAPDQFDWRKKGVVSSIKNQKHCGSCWA 631

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE-QPIEYTHQAGLESEKD 461
           FS AG +E  +AIKTGKLV  S+ QLV+C  Q SGC G  GL    + Y    G  S K 
Sbjct: 632 FSAAGNVESIHAIKTGKLVHVSEQQLVDCDSQDSGCSG--GLTWNAMRYFRTNGAVSLKS 689

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN--GSETMKKILYKYGPLSVGLNSHLIHF 519
           YPY   N     C YD +KV +   KD+ +      + +K+ LY  G LS+ + S  + +
Sbjct: 690 YPYVAQNE---NCRYDSNKV-VIRLKDYKHITQLSEDQIKEHLYNIGLLSIDITSTQLTW 745

Query: 520 YNGTPIRKNDETCSPYDL-GHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           Y G  +    E C   DL  HAVLLV YGK++ + YW+ +NSWG  G
Sbjct: 746 YEGGILI---EECRRSDLVDHAVLLVEYGKENSVEYWIVKNSWGQNG 789



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/192 (43%), Positives = 108/192 (56%), Gaps = 10/192 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD +DWRKK V     +Q  CGSCWAFS AG +E  +AIKTGKLV  S+ QLV+C  Q 
Sbjct: 605 APDQFDWRKKGVVSSIKNQKHCGSCWAFSAAGNVESIHAIKTGKLVHVSEQQLVDCDSQD 664

Query: 71  SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--G 128
           SGC G     ++ Y    G  S K YPY   N     C YD +KV +   KD+ H     
Sbjct: 665 SGCSGGLTWNAMRYFRTNGAVSLKSYPYVAQNE---NCRYDSNKV-VIRLKDYKHITQLS 720

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDL-GHAVLLVGYGKQDNIP 187
            + +K+ LY  G LS+ + S  +  Y G  +    E C   DL  HAVLLV YGK++++ 
Sbjct: 721 EDQIKEHLYNIGLLSIDITSTQLTWYEGGILI---EECRRSDLVDHAVLLVEYGKENSVE 777

Query: 188 YWLVRNSWGPIG 199
           YW+V+NSWG  G
Sbjct: 778 YWIVKNSWGQNG 789



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 33/41 (80%)

Query: 971  GHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNN 1011
             HAVLLVGYGK++ + YW+V+NSWG    ++G+F+I+RG N
Sbjct: 1064 NHAVLLVGYGKENGVEYWIVKNSWGQNWGEKGYFRIQRGVN 1104



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 35/50 (70%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNN 1011
            +E    Y + HAVLLVGYGK++ + YW+V+NSWG    + G+F+++ G N
Sbjct: 202  EECHRSYLINHAVLLVGYGKENGVKYWIVKNSWGQNWGENGYFRMKMGVN 251



 Score = 46.6 bits (109), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 963 ETCSPYDL-GHAVLLVGYGKQDDIPYWLVRNSWGPIG 998
           E C   DL  HAVLLV YGK++ + YW+V+NSWG  G
Sbjct: 753 EECRRSDLVDHAVLLVEYGKENSVEYWIVKNSWGQNG 789


>gi|358339355|dbj|GAA47435.1| cathepsin F [Clonorchis sinensis]
          Length = 1157

 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 171/591 (28%), Positives = 252/591 (42%), Gaps = 105/591 (17%)

Query: 300  GRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVAD 359
            G  +  ++ IK+    F Q   +    YG ++FSD + EE          + T+  +  D
Sbjct: 646  GMLWGEEDNIKQ--AEFYQTLERGTALYGVTQFSDLTGEEF---------QETFLGLRLD 694

Query: 360  REKVEKMLMEVEKDGPV--PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKT 417
             E+  K    V+K   V  P+ +DWR     GP  DQ  CGSCWAFS+ G +EGQ+  KT
Sbjct: 695  -EQYSKSQSYVKKKHSVSIPENYDWRPYGAVGPVLDQGHCGSCWAFSVIGNIEGQWFRKT 753

Query: 418  GKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYD 477
            G+LV  SK QLV+C +   GCGG              GLE E DY Y   +G    C  +
Sbjct: 754  GQLVSLSKQQLVDCDRSSRGCGGGYPPATYDSIRRIGGLEIELDYRYTGRDG---VCHQN 810

Query: 478  KSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDL 537
              K   +            T+ + L  +GP+S+ LN+ L+ FY    +      C   D+
Sbjct: 811  PRKFVAYVNSSVALTKDENTIAEWLSYHGPISMALNARLLQFYVSGIMHPPAAYCPVKDI 870

Query: 538  GHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQR 597
             HAVL VG+G + ++P+W+ +NSWG +  +EG+F+I RG++                   
Sbjct: 871  SHAVLSVGFGTKGNVPFWIVKNSWGTLWGEEGYFRIYRGDD------------------- 911

Query: 598  LVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET 657
                      + A+ +     +   +P    R      +RV +LA E S       + E 
Sbjct: 912  ----------MGALPISQPTNNSRLMPYHPLR---DATSRVTSLA-EYSRELRERQLYEE 957

Query: 658  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 717
            FK   +  G+ Y N     E   YF   G +           DR P             R
Sbjct: 958  FK---LNYGKVYEN-----EGMFYFLYLGAR----------FDREP------------SR 987

Query: 718  TYERIVADREKVEKML--MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGML 775
                +V D  ++ +     E+   GP+ D  D               CGSCWAFS  G +
Sbjct: 988  AGSMVVDDLGEIPERFDWRELGAVGPIQDQGD---------------CGSCWAFSTIGNI 1032

Query: 776  EGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNA 832
            EGQ+  KTG+L+  S+ QL++C     GC G +  P   Y       GLE   DYPY  A
Sbjct: 1033 EGQWFKKTGQLLTLSEQQLIDCDSVDDGCGGGY--PPDTYGDIVKMGGLELNADYPYIAA 1090

Query: 833  NGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 883
            +G    C  ++SK + +  K  +     +     L K GPLS  +N+D + 
Sbjct: 1091 DG---VCKMERSKFRAYVNKSLVLPTKEDQQAVWLSKNGPLSAGINADYLQ 1138



 Score =  202 bits (514), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 223/511 (43%), Gaps = 87/511 (17%)

Query: 11   VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            +P+ +DWR     GP  DQ  CGSCWAFS+ G +EGQ+  KTG+LV  SK QLV+C +  
Sbjct: 712  IPENYDWRPYGAVGPVLDQGHCGSCWAFSVIGNIEGQWFRKTGQLVSLSKQQLVDCDRSS 771

Query: 71   SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
             GC G +   + +   +  GLE E DY Y   +G    C  +  K   +           
Sbjct: 772  RGCGGGYPPATYDSIRRIGGLEIELDYRYTGRDG---VCHQNPRKFVAYVNSSVALTKDE 828

Query: 130  ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
             T+ + L  +GP+S+ LN+ L+  Y    +      C   D+ HAVL VG+G + N+P+W
Sbjct: 829  NTIAEWLSYHGPISMALNARLLQFYVSGIMHPPAAYCPVKDISHAVLSVGFGTKGNVPFW 888

Query: 190  LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQRLVLEKKAIMLIQAVFLLC 249
            +V+NSWG +  +EG+F+I RG++                             + A+ +  
Sbjct: 889  IVKNSWGTLWGEEGYFRIYRGDD-----------------------------MGALPISQ 919

Query: 250  GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEI 309
               +   +P    R      +RV +LA E S       + E FK   +  G+ Y N    
Sbjct: 920  PTNNSRLMPYHPLR---DATSRVTSLA-EYSRELRERQLYEEFK---LNYGKVYEN---- 968

Query: 310  KERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKML-- 367
             E   YF   G +           DR P             R    +V D  ++ +    
Sbjct: 969  -EGMFYFLYLGAR----------FDREP------------SRAGSMVVDDLGEIPERFDW 1005

Query: 368  MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 427
             E+   GP+ D  D               CGSCWAFS  G +EGQ+  KTG+L+  S+ Q
Sbjct: 1006 RELGAVGPIQDQGD---------------CGSCWAFSTIGNIEGQWFKKTGQLLTLSEQQ 1050

Query: 428  LVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGK 487
            L++C     GCGG    +   +     GLE   DYPY   +G    C  ++SK + +  K
Sbjct: 1051 LIDCDSVDDGCGGGYPPDTYGDIVKMGGLELNADYPYIAADG---VCKMERSKFRAYVNK 1107

Query: 488  DFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
              +     +     L K GPLS G+N+  + 
Sbjct: 1108 SLVLPTKEDQQAVWLSKNGPLSAGINADYLQ 1138



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 25/306 (8%)

Query: 666 GRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVAD 725
           G  +  ++ IK+    F Q   +    YG ++FSD + EE          + T+  +  D
Sbjct: 646 GMLWGEEDNIKQ--AEFYQTLERGTALYGVTQFSDLTGEEF---------QETFLGLRLD 694

Query: 726 REKVEKMLMEVEKDGPV--PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKT 783
            E+  K    V+K   V  P+ +DWR     GP  DQ  CGSCWAFS+ G +EGQ+  KT
Sbjct: 695 -EQYSKSQSYVKKKHSVSIPENYDWRPYGAVGPVLDQGHCGSCWAFSVIGNIEGQWFRKT 753

Query: 784 GKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYD 842
           G+LV  SK QLV+C +   GC G +   + +   +  GLE E DY Y   +G    C  +
Sbjct: 754 GQLVSLSKQQLVDCDRSSRGCGGGYPPATYDSIRRIGGLEIELDYRYTGRDG---VCHQN 810

Query: 843 KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDL 902
             K   +            T+ + L  +GP+S+ LN+ L+  Y    +      C   D+
Sbjct: 811 PRKFVAYVNSSVALTKDENTIAEWLSYHGPISMALNARLLQFYVSGIMHPPAAYCPVKDI 870

Query: 903 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKND 962
            HAVL VG+G + N+P+W+V+NSWG +  +EG+F+I RG++        G   I    N+
Sbjct: 871 SHAVLSVGFGTKGNVPFWIVKNSWGTLWGEEGYFRIYRGDD-------MGALPISQPTNN 923

Query: 963 ETCSPY 968
               PY
Sbjct: 924 SRLMPY 929



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 121/240 (50%), Gaps = 22/240 (9%)

Query: 360 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 419
           R+  +    E E  G   D++DWR     GP  DQ  CG+ WAFS  G +EGQY ++  +
Sbjct: 447 RKLNQSKTTEPETVGEPQDSFDWRDYGAVGPVLDQDRCGASWAFSAIGNIEGQYFMRVHR 506

Query: 420 LVEFSKSQLVECAKQCSGCGG------CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFK 473
           L+  S+ QLV+C +   GC G       +G++Q        GLE E DYPY    G +  
Sbjct: 507 LLSLSEQQLVDCDRIDQGCAGGTPYGAFEGIQQ------LGGLELEADYPYL---GHQDN 557

Query: 474 CAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCS 533
           C  +  +  +            + + + L+ +GPLSVG+N  L+ +Y+   ++   + C+
Sbjct: 558 CQSNPLRFVVSINGSVQLPKDEDQIAQYLFDHGPLSVGINGALLQYYSSGIMQPLWDNCN 617

Query: 534 PYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK-------IERGNNACGIEQIA 586
           P ++ HA L VG+G + D+PYW  +NSWG +  +E   K       +ERG    G+ Q +
Sbjct: 618 PAEMNHAGLAVGFGFEQDVPYWTIKNSWGMLWGEEDNIKQAEFYQTLERGTALYGVTQFS 677



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 11/234 (4%)

Query: 726 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 785
           R+  +    E E  G   D++DWR     GP  DQ  CG+ WAFS  G +EGQY ++  +
Sbjct: 447 RKLNQSKTTEPETVGEPQDSFDWRDYGAVGPVLDQDRCGASWAFSAIGNIEGQYFMRVHR 506

Query: 786 LVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS 844
           L+  S+ QLV+C +   GC G     + E   Q  GLE E DYPY    G +  C  +  
Sbjct: 507 LLSLSEQQLVDCDRIDQGCAGGTPYGAFEGIQQLGGLELEADYPYL---GHQDNCQSNPL 563

Query: 845 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 904
           +  +            + + + L+ +GPLSV +N  L+  Y+   ++   + C+P ++ H
Sbjct: 564 RFVVSINGSVQLPKDEDQIAQYLFDHGPLSVGINGALLQYYSSGIMQPLWDNCNPAEMNH 623

Query: 905 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK-------IERGNNACGIEQIA 951
           A L VG+G + ++PYW ++NSWG +  +E   K       +ERG    G+ Q +
Sbjct: 624 AGLAVGFGFEQDVPYWTIKNSWGMLWGEEDNIKQAEFYQTLERGTALYGVTQFS 677



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 11/225 (4%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           E E  G   D++DWR     GP  DQ  CG+ WAFS  G +EGQY ++  +L+  S+ QL
Sbjct: 456 EPETVGEPQDSFDWRDYGAVGPVLDQDRCGASWAFSAIGNIEGQYFMRVHRLLSLSEQQL 515

Query: 64  VECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           V+C +   GC G     + E   Q  GLE E DYPY    G +  C  +  +  +     
Sbjct: 516 VDCDRIDQGCAGGTPYGAFEGIQQLGGLELEADYPYL---GHQDNCQSNPLRFVVSINGS 572

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
                  + + + L+ +GPLSV +N  L+  Y+   ++   + C+P ++ HA L VG+G 
Sbjct: 573 VQLPKDEDQIAQYLFDHGPLSVGINGALLQYYSSGIMQPLWDNCNPAEMNHAGLAVGFGF 632

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFK-------IERGNNACGIEQIA 220
           + ++PYW ++NSWG +  +E   K       +ERG    G+ Q +
Sbjct: 633 EQDVPYWTIKNSWGMLWGEEDNIKQAEFYQTLERGTALYGVTQFS 677



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 92/195 (47%), Gaps = 25/195 (12%)

Query: 3   MEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
           + V++ G +P  +DWR+    GP  +Q  CGSCWA S                     ++
Sbjct: 210 IHVQEVGQLPSYFDWREYGAVGPVRNQGQCGSCWAIS---------------------AE 248

Query: 63  LVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 121
           +V+C     GC G F   + E   +  GLE    YPY    G +  C  D      +   
Sbjct: 249 VVDCDHADHGCSGGFPIHAYECVQRLGGLELAVRYPYV---GYQQYCQADPRYFVAYING 305

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
                  SE + K L  +GPLSV+L++ L+  Y    +  +   C+P +L HAVL VG+G
Sbjct: 306 SVALPKDSEQIAKFLATFGPLSVVLDARLLQYYRSGILNPSVAYCNPEELNHAVLSVGFG 365

Query: 182 KQDNIPYWLVRNSWG 196
            +  IPYW+++NSWG
Sbjct: 366 TEQGIPYWIIKNSWG 380



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 92/195 (47%), Gaps = 25/195 (12%)

Query: 734 MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 793
           + V++ G +P  +DWR+    GP  +Q  CGSCWA S                     ++
Sbjct: 210 IHVQEVGQLPSYFDWREYGAVGPVRNQGQCGSCWAIS---------------------AE 248

Query: 794 LVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 852
           +V+C     GC G F   + E   +  GLE    YPY    G +  C  D      +   
Sbjct: 249 VVDCDHADHGCSGGFPIHAYECVQRLGGLELAVRYPYV---GYQQYCQADPRYFVAYING 305

Query: 853 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 912
                  SE + K L  +GPLSV+L++ L+  Y    +  +   C+P +L HAVL VG+G
Sbjct: 306 SVALPKDSEQIAKFLATFGPLSVVLDARLLQYYRSGILNPSVAYCNPEELNHAVLSVGFG 365

Query: 913 KQDNIPYWLVRNSWG 927
            +  IPYW+++NSWG
Sbjct: 366 TEQGIPYWIIKNSWG 380



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 81/153 (52%), Gaps = 8/153 (5%)

Query: 3    MEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
            M V+  G +P+ +DWR+    GP  DQ DCGSCWAFS  G +EGQ+  KTG+L+  S+ Q
Sbjct: 991  MVVDDLGEIPERFDWRELGAVGPIQDQGDCGSCWAFSTIGNIEGQWFKKTGQLLTLSEQQ 1050

Query: 63   LVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
            L++C     GC G +  P   Y       GLE   DYPY  A+G    C  ++SK + + 
Sbjct: 1051 LIDCDSVDDGCGGGY--PPDTYGDIVKMGGLELNADYPYIAADG---VCKMERSKFRAYV 1105

Query: 120  GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 152
             K  +     +     L K GPLS  +N+D + 
Sbjct: 1106 NKSLVLPTKEDQQAVWLSKNGPLSAGINADYLQ 1138



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 24/195 (12%)

Query: 368 MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 427
           + V++ G +P  +DWR+    GP  +Q  CGSCWA S                     ++
Sbjct: 210 IHVQEVGQLPSYFDWREYGAVGPVRNQGQCGSCWAIS---------------------AE 248

Query: 428 LVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGK 487
           +V+C     GC G   +          GLE    YPY    G +  C  D      +   
Sbjct: 249 VVDCDHADHGCSGGFPIHAYECVQRLGGLELAVRYPYV---GYQQYCQADPRYFVAYING 305

Query: 488 DFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG 547
                  SE + K L  +GPLSV L++ L+ +Y    +  +   C+P +L HAVL VG+G
Sbjct: 306 SVALPKDSEQIAKFLATFGPLSVVLDARLLQYYRSGILNPSVAYCNPEELNHAVLSVGFG 365

Query: 548 KQDDIPYWLARNSWG 562
            +  IPYW+ +NSWG
Sbjct: 366 TEQGIPYWIIKNSWG 380



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 5/143 (3%)

Query: 421 VEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYD-KS 479
           VE +  QLV+C     GC G   L+  +      GL+   DYPY      +  C ++ K 
Sbjct: 18  VESNVQQLVDCDHVDRGCEGGFPLDAFMAVQRLGGLQLSIDYPYI---ASRQACQFNPKQ 74

Query: 480 KVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGH 539
            V   TG   L  N    + + L++ GPLSVGLNS  + FYN   +    E C P  L H
Sbjct: 75  AVAFVTGFAALPRN-ELLIAEYLHRNGPLSVGLNSRTLKFYNSGILNLAAEQCDPEALNH 133

Query: 540 AVLLVGYGKQDDIPYWLARNSWG 562
           A L VG+G  +  P+W+ +N++G
Sbjct: 134 AALAVGFGTDESTPFWIIKNTFG 156



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 6/143 (4%)

Query: 56  VEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD-KS 113
           VE +  QLV+C     GC+G F  +  +      GL+   DYPY  +   +  C ++ K 
Sbjct: 18  VESNVQQLVDCDHVDRGCEGGFPLDAFMAVQRLGGLQLSIDYPYIAS---RQACQFNPKQ 74

Query: 114 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 173
            V   TG   L  N    + + L++ GPLSV LNS  +  YN   +    E C P  L H
Sbjct: 75  AVAFVTGFAALPRN-ELLIAEYLHRNGPLSVGLNSRTLKFYNSGILNLAAEQCDPEALNH 133

Query: 174 AVLLVGYGKQDNIPYWLVRNSWG 196
           A L VG+G  ++ P+W+++N++G
Sbjct: 134 AALAVGFGTDESTPFWIIKNTFG 156



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 6/143 (4%)

Query: 787 VEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD-KS 844
           VE +  QLV+C     GC+G F  +  +      GL+   DYPY  +   +  C ++ K 
Sbjct: 18  VESNVQQLVDCDHVDRGCEGGFPLDAFMAVQRLGGLQLSIDYPYIAS---RQACQFNPKQ 74

Query: 845 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 904
            V   TG   L  N    + + L++ GPLSV LNS  +  YN   +    E C P  L H
Sbjct: 75  AVAFVTGFAALPRN-ELLIAEYLHRNGPLSVGLNSRTLKFYNSGILNLAAEQCDPEALNH 133

Query: 905 AVLLVGYGKQDNIPYWLVRNSWG 927
           A L VG+G  ++ P+W+++N++G
Sbjct: 134 AALAVGFGTDESTPFWIIKNTFG 156



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 36/47 (76%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNN 1011
            C   D+ HAVL VG+G + ++P+W+V+NSWG +  +EG+F+I RG++
Sbjct: 865  CPVKDISHAVLSVGFGTKGNVPFWIVKNSWGTLWGEEGYFRIYRGDD 911



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 7/64 (10%)

Query: 963  ETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFK-------IERGNNACGI 1015
            + C+P ++ HA L VG+G + D+PYW ++NSWG +  +E   K       +ERG    G+
Sbjct: 614  DNCNPAEMNHAGLAVGFGFEQDVPYWTIKNSWGMLWGEEDNIKQAEFYQTLERGTALYGV 673

Query: 1016 EQIA 1019
             Q +
Sbjct: 674  TQFS 677



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 25/31 (80%)

Query: 965 CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWG 995
           C+P +L HAVL VG+G +  IPYW+++NSWG
Sbjct: 350 CNPEELNHAVLSVGFGTEQGIPYWIIKNSWG 380



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 963 ETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWG 995
           E C P  L HA L VG+G  +  P+W+++N++G
Sbjct: 124 EQCDPEALNHAALAVGFGTDESTPFWIIKNTFG 156


>gi|67773380|gb|AAY81947.1| cysteine protease 9 [Paragonimus westermani]
          Length = 322

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/313 (38%), Positives = 171/313 (54%), Gaps = 29/313 (9%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLVRAQKLQLKDQGTARYGVTQFSDLTPEEF 83

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
             K         Y R   + ++VE++     K    P+  DWR+K       +Q +CGSC
Sbjct: 84  AAK---------YLRAAVNNDQVERVRPTGLK--AAPERMDWREKGAVTAVENQGSCGSC 132

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS-IEYTHQAGLESEK 825
           WAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC+G +   S +E  H  GLESE 
Sbjct: 133 WAFSAAGNVEGQWFIKTGQLVSLSKQQLVDCDRVAEGCNGGWPVSSYLEIKHMGGLESES 192

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIH 883
           DYPY    G +  CA +K K  L    D L   G+  E     L ++GPLS LLN+  + 
Sbjct: 193 DYPYV---GAEQTCALNKEK--LLAKIDDLIVLGAYEEEHAAYLAEHGPLSTLLNAVALQ 247

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
            Y    +    E C   +L HAVL VGY K+ ++PYW+++NSWG    ++G+F++ RG+ 
Sbjct: 248 HYQSGVLNPTYEECPDTELNHAVLTVGYDKEGDMPYWIIKNSWGTDWGEKGYFRLFRGDY 307

Query: 944 ACGIEQIAGYATI 956
            CGI ++A  A I
Sbjct: 308 TCGINRMATSAII 320



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/313 (37%), Positives = 167/313 (53%), Gaps = 28/313 (8%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLVRAQKLQLKDQGTARYGVTQFSDLTPEEF 83

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
             K         Y R   + ++VE++     K    P+  DWR+K       +Q +CGSC
Sbjct: 84  AAK---------YLRAAVNNDQVERVRPTGLK--AAPERMDWREKGAVTAVENQGSCGSC 132

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEK 460
           WAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC G   +   +E  H  GLESE 
Sbjct: 133 WAFSAAGNVEGQWFIKTGQLVSLSKQQLVDCDRVAEGCNGGWPVSSYLEIKHMGGLESES 192

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
           DYPY    G +  CA +K   KL    D L   G+  E     L ++GPLS  LN+  + 
Sbjct: 193 DYPYV---GAEQTCALNKE--KLLAKIDDLIVLGAYEEEHAAYLAEHGPLSTLLNAVALQ 247

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +    E C   +L HAVL VGY K+ D+PYW+ +NSWG    ++G+F++ RG+ 
Sbjct: 248 HYQSGVLNPTYEECPDTELNHAVLTVGYDKEGDMPYWIIKNSWGTDWGEKGYFRLFRGDY 307

Query: 579 ACGIEQIAGYATI 591
            CGI ++A  A I
Sbjct: 308 TCGINRMATSAII 320



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/218 (42%), Positives = 127/218 (58%), Gaps = 8/218 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P+  DWR+K       +Q  CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C +  
Sbjct: 108 APERMDWREKGAVTAVENQGSCGSCWAFSAAGNVEGQWFIKTGQLVSLSKQQLVDCDRVA 167

Query: 71  SGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G +   S +E  H  GLESE DYPY    G +  CA +K K  L    D L   G+
Sbjct: 168 EGCNGGWPVSSYLEIKHMGGLESESDYPYV---GAEQTCALNKEK--LLAKIDDLIVLGA 222

Query: 130 --ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E     L ++GPLS LLN+  +  Y    +    E C   +L HAVL VGY K+ ++P
Sbjct: 223 YEEEHAAYLAEHGPLSTLLNAVALQHYQSGVLNPTYEECPDTELNHAVLTVGYDKEGDMP 282

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           YW+++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 283 YWIIKNSWGTDWGEKGYFRLFRGDYTCGINRMATSAII 320


>gi|156546466|ref|XP_001607324.1| PREDICTED: hypothetical protein LOC100123649 [Nasonia vitripennis]
          Length = 1036

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/323 (36%), Positives = 169/323 (52%), Gaps = 31/323 (9%)

Query: 286  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRS 336
            E IL  F  F+ K  + Y N EE + RF+ FK + +   E         RYG ++F+D  
Sbjct: 727  EEIL--FHEFMGKYKKMYHNKEEKEMRFQIFKDNLNLIEELQRNEMGTGRYGVTQFTD-- 782

Query: 337  PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
                L K  FK      +  +     +  M M    D  +P  +DWR  NV  P  DQ +
Sbjct: 783  ----LTKAEFKARHLGLKPTLKSENDI-PMPMATIPDIELPSDYDWRHHNVVTPVKDQGS 837

Query: 397  CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQA 454
            CGSCWAFS+ G +EGQYAIK G+L+  S+ +LV+C K  SGC G   D   + IE     
Sbjct: 838  CGSCWAFSVTGNIEGQYAIKHGELLSLSEQELVDCDKLDSGCNGGLPDTAYRAIE--ELG 895

Query: 455  GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
            GLE E DYPY   + E  KC ++K+KVK+         +    M + L K GP+S+G+N+
Sbjct: 896  GLELESDYPY---DAEDEKCHFNKNKVKVNIVSGLNITSNETQMAQWLVKNGPMSIGINA 952

Query: 515  HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK------QDDIPYWLARNSWGPIGPDE 568
            + + FY G         CSP  L H VL+VGYG       +  +PYW+ +NSWGP   ++
Sbjct: 953  NAMQFYMGGVSHPFKFLCSPDSLDHGVLIVGYGVKFYPIFKKTMPYWIIKNSWGPRWGEQ 1012

Query: 569  GFFKIERGNNACGIEQIAGYATI 591
            G++++ RG+  CG+ ++   A +
Sbjct: 1013 GYYRVYRGDGTCGVNKMVTSAVV 1035



 Score =  189 bits (480), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/324 (35%), Positives = 174/324 (53%), Gaps = 34/324 (10%)

Query: 652  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRS 702
            E IL  F  F+ K  + Y N EE + RF+ FK + +   E         RYG ++F+D  
Sbjct: 727  EEIL--FHEFMGKYKKMYHNKEEKEMRFQIFKDNLNLIEELQRNEMGTGRYGVTQFTD-- 782

Query: 703  PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
                L K  FK      +  +     +  M M    D  +P  +DWR  NV  P  DQ +
Sbjct: 783  ----LTKAEFKARHLGLKPTLKSENDI-PMPMATIPDIELPSDYDWRHHNVVTPVKDQGS 837

Query: 763  CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGL 821
            CGSCWAFS+ G +EGQYAIK G+L+  S+ +LV+C K  SGC+G   + +     +  GL
Sbjct: 838  CGSCWAFSVTGNIEGQYAIKHGELLSLSEQELVDCDKLDSGCNGGLPDTAYRAIEELGGL 897

Query: 822  ESEKDYPYKNANGEKFKCAYDKSKVK--LFTGKDFLHFNGSET-MKKILYKYGPLSVLLN 878
            E E DYPY   + E  KC ++K+KVK  + +G   L+   +ET M + L K GP+S+ +N
Sbjct: 898  ELESDYPY---DAEDEKCHFNKNKVKVNIVSG---LNITSNETQMAQWLVKNGPMSIGIN 951

Query: 879  SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------QDNIPYWLVRNSWGPIGPD 932
            ++ +  Y G         CSP  L H VL+VGYG       +  +PYW+++NSWGP   +
Sbjct: 952  ANAMQFYMGGVSHPFKFLCSPDSLDHGVLIVGYGVKFYPIFKKTMPYWIIKNSWGPRWGE 1011

Query: 933  EGFFKIERGNNACGIEQIAGYATI 956
            +G++++ RG+  CG+ ++   A +
Sbjct: 1012 QGYYRVYRGDGTCGVNKMVTSAVV 1035



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/235 (39%), Positives = 137/235 (58%), Gaps = 16/235 (6%)

Query: 1    MLMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
            M M    D  +P  +DWR  NV  P  DQ  CGSCWAFS+ G +EGQYAIK G+L+  S+
Sbjct: 807  MPMATIPDIELPSDYDWRHHNVVTPVKDQGSCGSCWAFSVTGNIEGQYAIKHGELLSLSE 866

Query: 61   SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVK--L 117
             +LV+C K  SGC+G   + +     +  GLE E DYPY   + E  KC ++K+KVK  +
Sbjct: 867  QELVDCDKLDSGCNGGLPDTAYRAIEELGGLELESDYPY---DAEDEKCHFNKNKVKVNI 923

Query: 118  FTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 176
             +G   L+   +ET M + L K GP+S+ +N++ +  Y G         CSP  L H VL
Sbjct: 924  VSG---LNITSNETQMAQWLVKNGPMSIGINANAMQFYMGGVSHPFKFLCSPDSLDHGVL 980

Query: 177  LVGYGK------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +VGYG       +  +PYW+++NSWGP   ++G++++ RG+  CG+ ++   A +
Sbjct: 981  IVGYGVKFYPIFKKTMPYWIIKNSWGPRWGEQGYYRVYRGDGTCGVNKMVTSAVV 1035


>gi|244790097|ref|NP_001156454.1| cathepsin F isoform 2 precursor [Acyrthosiphon pisum]
          Length = 586

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/337 (35%), Positives = 175/337 (51%), Gaps = 34/337 (10%)

Query: 279 GSLTFDNENI-----LET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHER- 326
           G LT    NI     L+T F+ FI+   + Y + EE   RF  F  +  K      HE+ 
Sbjct: 261 GKLTTKKNNIDDRLQLKTDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQG 320

Query: 327 ---YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEV-EKDGPVPDAWDW 382
              YG ++F+D      L K  FK   + Y  + +     + + M V  +   +P+ +DW
Sbjct: 321 SAIYGATQFAD------LTKNEFK---KKYLGLDSSMTSKKTLPMAVIPQSASIPNEFDW 371

Query: 383 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCD 442
           R  NV  P  +Q ACGSCWAFS    +EGQYA+K+ +L+  S+ +L++C    +GCGG  
Sbjct: 372 RNHNVVTPVKNQGACGSCWAFSAIANIEGQYALKSKELLSLSEQELIDCDNLDNGCGG-G 430

Query: 443 GLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKI 501
            + Q  E      GLE+E DYPY  G+ ++  C   KS VK+   K        E + K 
Sbjct: 431 LMTQAFEAVENLGGLETESDYPYE-GHADRKGCQLKKSDVKVSISKAVNVSTDEEDIAKF 489

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG------KQDDIPYW 555
           L K+GPLSVG+N++ + FY G         CSP  L H V +VGYG         ++PYW
Sbjct: 490 LVKHGPLSVGVNANAMQFYMGGVSHPIHALCSPKSLDHGVAIVGYGVHRTKYTHKNLPYW 549

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           L +NSWGP   ++G++ + RG+ +CG+ Q+   A I+
Sbjct: 550 LIKNSWGPGWGEKGYYLLYRGDGSCGVNQMVSSAIIE 586



 Score =  186 bits (471), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 172/336 (51%), Gaps = 33/336 (9%)

Query: 645 GSLTFDNENI-----LET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHER- 692
           G LT    NI     L+T F+ FI+   + Y + EE   RF  F  +  K      HE+ 
Sbjct: 261 GKLTTKKNNIDDRLQLKTDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQG 320

Query: 693 ---YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEV-EKDGPVPDAWDW 748
              YG ++F+D      L K  FK   + Y  + +     + + M V  +   +P+ +DW
Sbjct: 321 SAIYGATQFAD------LTKNEFK---KKYLGLDSSMTSKKTLPMAVIPQSASIPNEFDW 371

Query: 749 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF 808
           R  NV  P  +Q ACGSCWAFS    +EGQYA+K+ +L+  S+ +L++C    +GC G  
Sbjct: 372 RNHNVVTPVKNQGACGSCWAFSAIANIEGQYALKSKELLSLSEQELIDCDNLDNGCGGGL 431

Query: 809 FEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 867
              + E      GLE+E DYPY+  + ++  C   KS VK+   K        E + K L
Sbjct: 432 MTQAFEAVENLGGLETESDYPYE-GHADRKGCQLKKSDVKVSISKAVNVSTDEEDIAKFL 490

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG------KQDNIPYWL 921
            K+GPLSV +N++ +  Y G         CSP  L H V +VGYG         N+PYWL
Sbjct: 491 VKHGPLSVGVNANAMQFYMGGVSHPIHALCSPKSLDHGVAIVGYGVHRTKYTHKNLPYWL 550

Query: 922 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           ++NSWGP   ++G++ + RG+ +CG+ Q+   A I+
Sbjct: 551 IKNSWGPGWGEKGYYLLYRGDGSCGVNQMVSSAIIE 586



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 127/229 (55%), Gaps = 8/229 (3%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           + +   +P+ +DWR  NV  P  +Q  CGSCWAFS    +EGQYA+K+ +L+  S+ +L+
Sbjct: 359 IPQSASIPNEFDWRNHNVVTPVKNQGACGSCWAFSAIANIEGQYALKSKELLSLSEQELI 418

Query: 65  ECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C    +GC G     + E      GLE+E DYPY+  + ++  C   KS VK+   K  
Sbjct: 419 DCDNLDNGCGGGLMTQAFEAVENLGGLETESDYPYE-GHADRKGCQLKKSDVKVSISKAV 477

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-- 181
                 E + K L K+GPLSV +N++ +  Y G         CSP  L H V +VGYG  
Sbjct: 478 NVSTDEEDIAKFLVKHGPLSVGVNANAMQFYMGGVSHPIHALCSPKSLDHGVAIVGYGVH 537

Query: 182 ----KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
                  N+PYWL++NSWGP   ++G++ + RG+ +CG+ Q+   A I+
Sbjct: 538 RTKYTHKNLPYWLIKNSWGPGWGEKGYYLLYRGDGSCGVNQMVSSAIIE 586



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 6/67 (8%)

Query: 965  CSPYDLGHAVLLVGYG------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            CSP  L H V +VGYG         ++PYWL++NSWGP   ++G++ + RG+ +CG+ Q+
Sbjct: 520  CSPKSLDHGVAIVGYGVHRTKYTHKNLPYWLIKNSWGPGWGEKGYYLLYRGDGSCGVNQM 579

Query: 1019 AGYATID 1025
               A I+
Sbjct: 580  VSSAIIE 586


>gi|67773374|gb|AAY81944.1| cysteine protease 6 [Paragonimus westermani]
          Length = 325

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 167/316 (52%), Gaps = 35/316 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEI 340
           E ++ F    G+ YAND++ K RF  FK         Q   +   RYG ++FSD +PEE 
Sbjct: 30  ELYEQFKRDYGKSYANDDDEK-RFAIFKDNLVRAQNYQLQEQGTARYGVTQFSDLTPEEF 88

Query: 341 LCKTGFKWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
             K             ++ R  ++VE++ +   K    P++ DWR+     P  DQ +CG
Sbjct: 89  AAK------------FLSSRFDDQVERVQLNDLK--AAPESVDWRELGAVAPVEDQGSCG 134

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAG 455
           SCWAFS+AG +EGQ+ +KTG+LV  SK QLV+C  Q SGC   DG   P  Y       G
Sbjct: 135 SCWAFSVAGNVEGQWFLKTGQLVSLSKQQLVDCDVQDSGC---DGGYPPTTYGEIIRMGG 191

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           LE+++DYPY    G +  C  D+SK+        +     +     + ++GP+S G+N+ 
Sbjct: 192 LEAQRDYPYV---GREQPCKLDESKLLAKINSSIVLEANEKKQAAYIAEHGPMSSGINAV 248

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + FY       +   C P  L H VL VGYG +D +PYW+ +NSWG    ++G+F++ R
Sbjct: 249 TLQFYQSGISHPSKSQCQPDWLNHGVLSVGYGTEDGVPYWIIKNSWGTGWGEKGYFRLYR 308

Query: 576 GNNACGIEQIAGYATI 591
           G+  CGIE++   A I
Sbjct: 309 GDGTCGIEKVVSSAII 324



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 110/313 (35%), Positives = 167/313 (53%), Gaps = 30/313 (9%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEI 706
           E ++ F    G+ YAND++ K RF  FK         Q   +   RYG ++FSD +PEE 
Sbjct: 30  ELYEQFKRDYGKSYANDDDEK-RFAIFKDNLVRAQNYQLQEQGTARYGVTQFSDLTPEEF 88

Query: 707 LCKTGFKWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
             K             ++ R  ++VE++ +   K    P++ DWR+     P  DQ +CG
Sbjct: 89  AAK------------FLSSRFDDQVERVQLNDLK--AAPESVDWRELGAVAPVEDQGSCG 134

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLES 823
           SCWAFS+AG +EGQ+ +KTG+LV  SK QLV+C  Q SGCDG +   +  E     GLE+
Sbjct: 135 SCWAFSVAGNVEGQWFLKTGQLVSLSKQQLVDCDVQDSGCDGGYPPTTYGEIIRMGGLEA 194

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 883
           ++DYPY    G +  C  D+SK+        +     +     + ++GP+S  +N+  + 
Sbjct: 195 QRDYPYV---GREQPCKLDESKLLAKINSSIVLEANEKKQAAYIAEHGPMSSGINAVTLQ 251

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
            Y       +   C P  L H VL VGYG +D +PYW+++NSWG    ++G+F++ RG+ 
Sbjct: 252 FYQSGISHPSKSQCQPDWLNHGVLSVGYGTEDGVPYWIIKNSWGTGWGEKGYFRLYRGDG 311

Query: 944 ACGIEQIAGYATI 956
            CGIE++   A I
Sbjct: 312 TCGIEKVVSSAII 324



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 123/216 (56%), Gaps = 4/216 (1%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P++ DWR+     P  DQ  CGSCWAFS+AG +EGQ+ +KTG+LV  SK QLV+C  Q 
Sbjct: 112 APESVDWRELGAVAPVEDQGSCGSCWAFSVAGNVEGQWFLKTGQLVSLSKQQLVDCDVQD 171

Query: 71  SGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           SGCDG +   +  E     GLE+++DYPY    G +  C  D+SK+        +     
Sbjct: 172 SGCDGGYPPTTYGEIIRMGGLEAQRDYPYV---GREQPCKLDESKLLAKINSSIVLEANE 228

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           +     + ++GP+S  +N+  +  Y       +   C P  L H VL VGYG +D +PYW
Sbjct: 229 KKQAAYIAEHGPMSSGINAVTLQFYQSGISHPSKSQCQPDWLNHGVLSVGYGTEDGVPYW 288

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +++NSWG    ++G+F++ RG+  CGIE++   A I
Sbjct: 289 IIKNSWGTGWGEKGYFRLYRGDGTCGIEKVVSSAII 324



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 41/60 (68%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  L H VL VGYG +D +PYW+++NSWG    ++G+F++ RG+  CGIE++   A I
Sbjct: 265  CQPDWLNHGVLSVGYGTEDGVPYWIIKNSWGTGWGEKGYFRLYRGDGTCGIEKVVSSAII 324


>gi|67773370|gb|AAY81942.1| cysteine protease 3 [Paragonimus westermani]
          Length = 321

 Score =  191 bits (484), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/312 (37%), Positives = 170/312 (54%), Gaps = 27/312 (8%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEF 83

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
             K         Y     + ++V+++     K    P+  DWR K       +Q +CGSC
Sbjct: 84  AAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAKGAVTAVENQGSCGSC 132

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS-IEYTHQAGLESEK 825
           WAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC+G +   S +E  H  GLES+ 
Sbjct: 133 WAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAADGCNGGWPASSYLEIMHMGGLESQD 192

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHD 884
           DYPY    G K +C  +K ++ L    D +    SE      L ++GPLS LLN+  +  
Sbjct: 193 DYPYA---GVKEQCFMEKERL-LAKIDDSIALGPSEDDNAAYLAEHGPLSTLLNAITLQY 248

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    I  + E CSP DL HAVL VGY K+ ++PYW+++NSW     ++G+F++ RG+  
Sbjct: 249 YQSGIIHPSYEECSPVDLNHAVLTVGYDKEGDMPYWIIKNSWNVEWGEKGYFRLYRGDGT 308

Query: 945 CGIEQIAGYATI 956
           CGI ++   A I
Sbjct: 309 CGINRMPTSAII 320



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/311 (35%), Positives = 162/311 (52%), Gaps = 24/311 (7%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEF 83

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
             K         Y     + ++V+++     K    P+  DWR K       +Q +CGSC
Sbjct: 84  AAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAKGAVTAVENQGSCGSC 132

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEK 460
           WAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC G       +E  H  GLES+ 
Sbjct: 133 WAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAADGCNGGWPASSYLEIMHMGGLESQD 192

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY 520
           DYPY    G K +C  +K ++              +     L ++GPLS  LN+  + +Y
Sbjct: 193 DYPYA---GVKEQCFMEKERLLAKIDDSIALGPSEDDNAAYLAEHGPLSTLLNAITLQYY 249

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
               I  + E CSP DL HAVL VGY K+ D+PYW+ +NSW     ++G+F++ RG+  C
Sbjct: 250 QSGIIHPSYEECSPVDLNHAVLTVGYDKEGDMPYWIIKNSWNVEWGEKGYFRLYRGDGTC 309

Query: 581 GIEQIAGYATI 591
           GI ++   A I
Sbjct: 310 GINRMPTSAII 320



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/217 (42%), Positives = 127/217 (58%), Gaps = 6/217 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P+  DWR K       +Q  CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C +  
Sbjct: 108 APERIDWRAKGAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAA 167

Query: 71  SGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G +   S +E  H  GLES+ DYPY    G K +C  +K ++ L    D +    S
Sbjct: 168 DGCNGGWPASSYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERL-LAKIDDSIALGPS 223

Query: 130 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
           E      L ++GPLS LLN+  +  Y    I  + E CSP DL HAVL VGY K+ ++PY
Sbjct: 224 EDDNAAYLAEHGPLSTLLNAITLQYYQSGIIHPSYEECSPVDLNHAVLTVGYDKEGDMPY 283

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+++NSW     ++G+F++ RG+  CGI ++   A I
Sbjct: 284 WIIKNSWNVEWGEKGYFRLYRGDGTCGINRMPTSAII 320



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 43/62 (69%)

Query: 963  ETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 1022
            E CSP DL HAVL VGY K+ D+PYW+++NSW     ++G+F++ RG+  CGI ++   A
Sbjct: 259  EECSPVDLNHAVLTVGYDKEGDMPYWIIKNSWNVEWGEKGYFRLYRGDGTCGINRMPTSA 318

Query: 1023 TI 1024
             I
Sbjct: 319  II 320


>gi|242014216|ref|XP_002427787.1| Cathepsin F precursor, putative [Pediculus humanus corporis]
 gi|212512256|gb|EEB15049.1| Cathepsin F precursor, putative [Pediculus humanus corporis]
          Length = 434

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/335 (34%), Positives = 169/335 (50%), Gaps = 32/335 (9%)

Query: 274 TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKH 324
           T  I+  +   NE +L++FK F++K  + Y + EE K+RF  F+ +           K  
Sbjct: 116 TKKIDNEIINKNEYLLQSFKDFVLKFNKVYFSKEEFKKRFRIFRANMKKINFLNKAEKGT 175

Query: 325 ERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWR 383
            +YG +EFSD S  E     G K             +K E  L   E  D  +PD +DWR
Sbjct: 176 AQYGITEFSDLSVTEFKNYLGLK-------------KKPESKLPTAEIPDVKLPDNFDWR 222

Query: 384 KKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG 443
             N   P  +Q +CGSCWAFS+ G +EG +AIK  +L+  S+ +L++C K  +GC G   
Sbjct: 223 HYNAVTPVKNQGSCGSCWAFSVTGNIEGLWAIKKHELLSLSEQELIDCDKIDNGCNGGYM 282

Query: 444 LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
            E         GLE+E DYPY     E  KC  +K+++K+              + K LY
Sbjct: 283 PETYEAIMKLGGLETETDYPYE---AENEKCNLNKTEIKVKINGAVNLTKSELDIAKWLY 339

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD------IPYWLA 557
           K GP+S GLN++ + FY G         C+P +  H +L+VGYG          IPYW+ 
Sbjct: 340 KNGPVSAGLNANAMQFYLGGISHPPKILCNPEEQDHGILIVGYGIHKSSILKRTIPYWII 399

Query: 558 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           +NSWG    ++G++++ RG+  CGI Q+   A I+
Sbjct: 400 KNSWGKHWGEKGYYRLYRGSGVCGINQMVSSALIN 434



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 174/335 (51%), Gaps = 33/335 (9%)

Query: 640 TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKH 690
           T  I+  +   NE +L++FK F++K  + Y + EE K+RF  F+ +           K  
Sbjct: 116 TKKIDNEIINKNEYLLQSFKDFVLKFNKVYFSKEEFKKRFRIFRANMKKINFLNKAEKGT 175

Query: 691 ERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWR 749
            +YG +EFSD S  E     G K             +K E  L   E  D  +PD +DWR
Sbjct: 176 AQYGITEFSDLSVTEFKNYLGLK-------------KKPESKLPTAEIPDVKLPDNFDWR 222

Query: 750 KKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFF 809
             N   P  +Q +CGSCWAFS+ G +EG +AIK  +L+  S+ +L++C K  +GC+G + 
Sbjct: 223 HYNAVTPVKNQGSCGSCWAFSVTGNIEGLWAIKKHELLSLSEQELIDCDKIDNGCNGGYM 282

Query: 810 EPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILY 868
             + E   +  GLE+E DYPY+    E  KC  +K+++K+              + K LY
Sbjct: 283 PETYEAIMKLGGLETETDYPYE---AENEKCNLNKTEIKVKINGAVNLTKSELDIAKWLY 339

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN------IPYWLV 922
           K GP+S  LN++ +  Y G         C+P +  H +L+VGYG   +      IPYW++
Sbjct: 340 KNGPVSAGLNANAMQFYLGGISHPPKILCNPEEQDHGILIVGYGIHKSSILKRTIPYWII 399

Query: 923 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           +NSWG    ++G++++ RG+  CGI Q+   A I+
Sbjct: 400 KNSWGKHWGEKGYYRLYRGSGVCGINQMVSSALIN 434



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 81/226 (35%), Positives = 127/226 (56%), Gaps = 10/226 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +PD +DWR  N   P  +Q  CGSCWAFS+ G +EG +AIK  +L+  S+ +L++C 
Sbjct: 212 DVKLPDNFDWRHYNAVTPVKNQGSCGSCWAFSVTGNIEGLWAIKKHELLSLSEQELIDCD 271

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
           K  +GC+G +   + E   +  GLE+E DYPY+    E  KC  +K+++K+         
Sbjct: 272 KIDNGCNGGYMPETYEAIMKLGGLETETDYPYE---AENEKCNLNKTEIKVKINGAVNLT 328

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN- 185
                + K LYK GP+S  LN++ +  Y G         C+P +  H +L+VGYG   + 
Sbjct: 329 KSELDIAKWLYKNGPVSAGLNANAMQFYLGGISHPPKILCNPEEQDHGILIVGYGIHKSS 388

Query: 186 -----IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
                IPYW+++NSWG    ++G++++ RG+  CGI Q+   A I+
Sbjct: 389 ILKRTIPYWIIKNSWGKHWGEKGYYRLYRGSGVCGINQMVSSALIN 434



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 6/67 (8%)

Query: 965  CSPYDLGHAVLLVGYGKQDD------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            C+P +  H +L+VGYG          IPYW+++NSWG    ++G++++ RG+  CGI Q+
Sbjct: 368  CNPEEQDHGILIVGYGIHKSSILKRTIPYWIIKNSWGKHWGEKGYYRLYRGSGVCGINQM 427

Query: 1019 AGYATID 1025
               A I+
Sbjct: 428  VSSALIN 434


>gi|260234113|dbj|BAI44279.1| cysteine proteinase inhibitor precursor [Manduca sexta]
 gi|261336196|dbj|BAH59606.2| cysteine proteinase inhibitor precursor [Manduca sexta]
          Length = 2676

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 32/319 (10%)

Query: 292  FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEIL 341
            F  F+     +Y +D  ++++RFE FK++  K HE          YG + F+D + EE  
Sbjct: 2371 FYEFLSTYKPEYIDDRHQMRQRFEIFKENVRKMHELNTHERGTATYGVTRFADLTYEEFS 2430

Query: 342  CK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
             K  G K S R   ++        +    V  +   PD++DWR         DQ +CGSC
Sbjct: 2431 TKHMGMKASLRDPNQV--------QFRKAVIPNVTAPDSFDWRDHGAVTGVKDQGSCGSC 2482

Query: 401  WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLES 458
            WAFS+ G +EGQ+ +KTG LV  S+ +LV+C K   GC G   D   + IE     GLES
Sbjct: 2483 WAFSVTGNIEGQWKMKTGDLVSLSEQELVDCDKLDQGCNGGLPDNAYRAIE--QLGGLES 2540

Query: 459  EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
            E DYPY    G   KC+++K+  ++         +    M K L K+GP+S+G+N++ + 
Sbjct: 2541 EDDYPYE---GSDDKCSFNKTLARVQISGAVNITSNETDMAKWLVKHGPISIGINANAMQ 2597

Query: 519  FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFK 572
            FY G         C+P +L H VL+VGYG +D       +PYW+ +NSWG    ++G+++
Sbjct: 2598 FYMGGISHPWRMLCNPSNLDHGVLIVGYGAKDYPLFHKHLPYWIIKNSWGTSWGEQGYYR 2657

Query: 573  IERGNNACGIEQIAGYATI 591
            + RG+  CG+ Q+A  A +
Sbjct: 2658 VYRGDGTCGVNQMASSAVV 2676



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 175/319 (54%), Gaps = 33/319 (10%)

Query: 658  FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEIL 707
            F  F+     +Y +D  ++++RFE FK++  K HE          YG + F+D + EE  
Sbjct: 2371 FYEFLSTYKPEYIDDRHQMRQRFEIFKENVRKMHELNTHERGTATYGVTRFADLTYEEFS 2430

Query: 708  CK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
             K  G K S R   ++        +    V  +   PD++DWR         DQ +CGSC
Sbjct: 2431 TKHMGMKASLRDPNQV--------QFRKAVIPNVTAPDSFDWRDHGAVTGVKDQGSCGSC 2482

Query: 767  WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEK 825
            WAFS+ G +EGQ+ +KTG LV  S+ +LV+C K   GC+G   + +     Q  GLESE 
Sbjct: 2483 WAFSVTGNIEGQWKMKTGDLVSLSEQELVDCDKLDQGCNGGLPDNAYRAIEQLGGLESED 2542

Query: 826  DYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIH 883
            DYPY+   G   KC+++K+  ++  +G   ++   +ET M K L K+GP+S+ +N++ + 
Sbjct: 2543 DYPYE---GSDDKCSFNKTLARVQISGA--VNITSNETDMAKWLVKHGPISIGINANAMQ 2597

Query: 884  DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFK 937
             Y G         C+P +L H VL+VGYG +D      ++PYW+++NSWG    ++G+++
Sbjct: 2598 FYMGGISHPWRMLCNPSNLDHGVLIVGYGAKDYPLFHKHLPYWIIKNSWGTSWGEQGYYR 2657

Query: 938  IERGNNACGIEQIAGYATI 956
            + RG+  CG+ Q+A  A +
Sbjct: 2658 VYRGDGTCGVNQMASSAVV 2676



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 134/223 (60%), Gaps = 14/223 (6%)

Query: 12   PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
            PD++DWR         DQ  CGSCWAFS+ G +EGQ+ +KTG LV  S+ +LV+C K   
Sbjct: 2459 PDSFDWRDHGAVTGVKDQGSCGSCWAFSVTGNIEGQWKMKTGDLVSLSEQELVDCDKLDQ 2518

Query: 72   GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGS 129
            GC+G   + +     Q  GLESE DYPY+   G   KC+++K+  ++  +G   ++   +
Sbjct: 2519 GCNGGLPDNAYRAIEQLGGLESEDDYPYE---GSDDKCSFNKTLARVQISGA--VNITSN 2573

Query: 130  ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD---- 184
            ET M K L K+GP+S+ +N++ +  Y G         C+P +L H VL+VGYG +D    
Sbjct: 2574 ETDMAKWLVKHGPISIGINANAMQFYMGGISHPWRMLCNPSNLDHGVLIVGYGAKDYPLF 2633

Query: 185  --NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
              ++PYW+++NSWG    ++G++++ RG+  CG+ Q+A  A +
Sbjct: 2634 HKHLPYWIIKNSWGTSWGEQGYYRVYRGDGTCGVNQMASSAVV 2676



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 6/66 (9%)

Query: 965  CSPYDLGHAVLLVGYGKQD------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            C+P +L H VL+VGYG +D       +PYW+++NSWG    ++G++++ RG+  CG+ Q+
Sbjct: 2611 CNPSNLDHGVLIVGYGAKDYPLFHKHLPYWIIKNSWGTSWGEQGYYRVYRGDGTCGVNQM 2670

Query: 1019 AGYATI 1024
            A  A +
Sbjct: 2671 ASSAVV 2676


>gi|56718883|gb|AAW28152.1| westerpain-10 [Paragonimus westermani]
          Length = 327

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/337 (34%), Positives = 176/337 (52%), Gaps = 25/337 (7%)

Query: 630 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 689
            T    A + + AI  S     ++  E ++ F    G+ YAN+++ K RF  FK +  + 
Sbjct: 4   FTVSCFALIVSCAIAVSAGRVPDSARELYEQFKRGYGKVYANEDDQK-RFAIFKDNLVRA 62

Query: 690 HE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 740
            +         RYG ++FSD +PEE   K         Y     + ++V++M     K  
Sbjct: 63  QKLQLKDQGTARYGVTQFSDLTPEEFAAK---------YLSAPVNDDQVKRMRPTGLK-- 111

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
             P+  DWR K       +Q +CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C + 
Sbjct: 112 AAPERIDWRAKGAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRA 171

Query: 801 CSGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 859
             GC+G +   S +E  +  GLESE DYPY    G +  CA +K K+        +    
Sbjct: 172 AQGCNGGWPASSYLEIMYMGGLESESDYPYV---GVEQTCALNKEKLVAKIDDSIVLGPE 228

Query: 860 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 919
            E     L ++GPLS LLN+  +  Y    ++   + C   +L HAVL VGY K+ ++PY
Sbjct: 229 EEDHAAYLAEHGPLSTLLNAVALQHYQSGVLKPTFDECPDTELNHAVLTVGYDKEGDMPY 288

Query: 920 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           W+++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 289 WIIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 325



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/337 (34%), Positives = 171/337 (50%), Gaps = 24/337 (7%)

Query: 264 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 323
            T    A + + AI  S     ++  E ++ F    G+ YAN+++ K RF  FK +  + 
Sbjct: 4   FTVSCFALIVSCAIAVSAGRVPDSARELYEQFKRGYGKVYANEDDQK-RFAIFKDNLVRA 62

Query: 324 HE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 374
            +         RYG ++FSD +PEE   K         Y     + ++V++M     K  
Sbjct: 63  QKLQLKDQGTARYGVTQFSDLTPEEFAAK---------YLSAPVNDDQVKRMRPTGLK-- 111

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
             P+  DWR K       +Q +CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C + 
Sbjct: 112 AAPERIDWRAKGAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRA 171

Query: 435 CSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG 494
             GC G       +E  +  GLESE DYPY    G +  CA +K K+        +    
Sbjct: 172 AQGCNGGWPASSYLEIMYMGGLESESDYPYV---GVEQTCALNKEKLVAKIDDSIVLGPE 228

Query: 495 SETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPY 554
            E     L ++GPLS  LN+  +  Y    ++   + C   +L HAVL VGY K+ D+PY
Sbjct: 229 EEDHAAYLAEHGPLSTLLNAVALQHYQSGVLKPTFDECPDTELNHAVLTVGYDKEGDMPY 288

Query: 555 WLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           W+ +NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 289 WIIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 325



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/216 (40%), Positives = 124/216 (57%), Gaps = 4/216 (1%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P+  DWR K       +Q  CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C +  
Sbjct: 113 APERIDWRAKGAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAA 172

Query: 71  SGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G +   S +E  +  GLESE DYPY    G +  CA +K K+        +     
Sbjct: 173 QGCNGGWPASSYLEIMYMGGLESESDYPYV---GVEQTCALNKEKLVAKIDDSIVLGPEE 229

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           E     L ++GPLS LLN+  +  Y    ++   + C   +L HAVL VGY K+ ++PYW
Sbjct: 230 EDHAAYLAEHGPLSTLLNAVALQHYQSGVLKPTFDECPDTELNHAVLTVGYDKEGDMPYW 289

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 290 IIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 325



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 2/100 (2%)

Query: 927  GPIGPDEGFFKIERGNNACGIEQIA--GYATIDVVKNDETCSPYDLGHAVLLVGYGKQDD 984
            GP   D   +  E G  +  +  +A   Y +  +    + C   +L HAVL VGY K+ D
Sbjct: 226  GPEEEDHAAYLAEHGPLSTLLNAVALQHYQSGVLKPTFDECPDTELNHAVLTVGYDKEGD 285

Query: 985  IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +PYW+++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 286  MPYWIIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 325


>gi|56718881|gb|AAW28151.1| westerpain-1 [Paragonimus westermani]
          Length = 322

 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/311 (36%), Positives = 167/311 (53%), Gaps = 25/311 (8%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEF 83

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
             K         Y     + ++V+++     K    P+  DWR K       +Q +CGSC
Sbjct: 84  AAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAKGAVTAVENQGSCGSC 132

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS-IEYTHQAGLESEK 825
           WAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC+G +   S +E  +  GLESE 
Sbjct: 133 WAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAAQGCNGGWPASSYLEIMYMGGLESES 192

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DYPY    G +  CA +K K+        +     E     L ++GPLS LLN+  +  Y
Sbjct: 193 DYPYV---GVEQTCALNKEKLVAKIDDSIVLGPEEEDHAAYLAEHGPLSTLLNAVALQYY 249

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
               ++   E C   +L HAVL VGY K+ ++PYW+++NSWG    ++G+F++ RG+  C
Sbjct: 250 QSGVLKPTFEECPDTELNHAVLTVGYDKEGDMPYWIIKNSWGTDWGEKGYFRLFRGDCTC 309

Query: 946 GIEQIAGYATI 956
           GI ++A  A I
Sbjct: 310 GINRMATSAII 320



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/311 (35%), Positives = 163/311 (52%), Gaps = 24/311 (7%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEF 83

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
             K         Y     + ++V+++     K    P+  DWR K       +Q +CGSC
Sbjct: 84  AAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAKGAVTAVENQGSCGSC 132

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEK 460
           WAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC G       +E  +  GLESE 
Sbjct: 133 WAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAAQGCNGGWPASSYLEIMYMGGLESES 192

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY 520
           DYPY    G +  CA +K K+        +     E     L ++GPLS  LN+  + +Y
Sbjct: 193 DYPYV---GVEQTCALNKEKLVAKIDDSIVLGPEEEDHAAYLAEHGPLSTLLNAVALQYY 249

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
               ++   E C   +L HAVL VGY K+ D+PYW+ +NSWG    ++G+F++ RG+  C
Sbjct: 250 QSGVLKPTFEECPDTELNHAVLTVGYDKEGDMPYWIIKNSWGTDWGEKGYFRLFRGDCTC 309

Query: 581 GIEQIAGYATI 591
           GI ++A  A I
Sbjct: 310 GINRMATSAII 320



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 124/216 (57%), Gaps = 4/216 (1%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P+  DWR K       +Q  CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C +  
Sbjct: 108 APERIDWRAKGAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAA 167

Query: 71  SGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G +   S +E  +  GLESE DYPY    G +  CA +K K+        +     
Sbjct: 168 QGCNGGWPASSYLEIMYMGGLESESDYPYV---GVEQTCALNKEKLVAKIDDSIVLGPEE 224

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           E     L ++GPLS LLN+  +  Y    ++   E C   +L HAVL VGY K+ ++PYW
Sbjct: 225 EDHAAYLAEHGPLSTLLNAVALQYYQSGVLKPTFEECPDTELNHAVLTVGYDKEGDMPYW 284

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 285 IIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 320



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 2/100 (2%)

Query: 927  GPIGPDEGFFKIERGNNACGIEQIA-GYATIDVVKND-ETCSPYDLGHAVLLVGYGKQDD 984
            GP   D   +  E G  +  +  +A  Y    V+K   E C   +L HAVL VGY K+ D
Sbjct: 221  GPEEEDHAAYLAEHGPLSTLLNAVALQYYQSGVLKPTFEECPDTELNHAVLTVGYDKEGD 280

Query: 985  IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +PYW+++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 281  MPYWIIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 320


>gi|67773372|gb|AAY81943.1| cysteine protease 5 [Paragonimus westermani]
          Length = 325

 Score =  187 bits (474), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/317 (36%), Positives = 162/317 (51%), Gaps = 29/317 (9%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRS 336
           +N  E ++ F    G+ YAND++ K RF  FK +  +  +         RYG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKVYANDDDQK-RFAIFKDNLVRAQKLQLKDRGTARYGVTQFSDLT 84

Query: 337 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
           PEE   K   +      ER+     K              P+  DWR+    GP  +Q +
Sbjct: 85  PEEFAAKYLSRPMNDQVERVRPTGLKA------------APERMDWREWGAVGPVENQGS 132

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGL 456
           CGSCWAFS+AG +EGQ+ +KTG+LV  SK QLV+C     GCGG       +E     GL
Sbjct: 133 CGSCWAFSVAGNVEGQWFLKTGQLVSLSKQQLVDCDVMDYGCGGGWPTNAYMEIMRMGGL 192

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNS 514
           E + DYPY    G + +C  +K   KL    D L   G+  E     L ++GPLS  LN+
Sbjct: 193 ELQSDYPYV---GVQQQCYLNKE--KLLAKIDDLIVLGAYEEEHAAYLAEHGPLSSALNA 247

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
             + FY       + E CSP  L HAVL VGY  ++ +PYW+ +NSWG    + G+F++ 
Sbjct: 248 GYLQFYQSGISHPSYEECSPASLNHAVLTVGYDTENGVPYWIIKNSWGTGWGENGYFRLY 307

Query: 575 RGNNACGIEQIAGYATI 591
           RG+  CGI ++   A I
Sbjct: 308 RGDGTCGINRMITSAII 324



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/317 (35%), Positives = 162/317 (51%), Gaps = 30/317 (9%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRS 702
           +N  E ++ F    G+ YAND++ K RF  FK +  +  +         RYG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKVYANDDDQK-RFAIFKDNLVRAQKLQLKDRGTARYGVTQFSDLT 84

Query: 703 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
           PEE   K   +      ER+     K              P+  DWR+    GP  +Q +
Sbjct: 85  PEEFAAKYLSRPMNDQVERVRPTGLKA------------APERMDWREWGAVGPVENQGS 132

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGL 821
           CGSCWAFS+AG +EGQ+ +KTG+LV  SK QLV+C     GC G +     +E     GL
Sbjct: 133 CGSCWAFSVAGNVEGQWFLKTGQLVSLSKQQLVDCDVMDYGCGGGWPTNAYMEIMRMGGL 192

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNS 879
           E + DYPY    G + +C  +K K  L    D L   G+  E     L ++GPLS  LN+
Sbjct: 193 ELQSDYPYV---GVQQQCYLNKEK--LLAKIDDLIVLGAYEEEHAAYLAEHGPLSSALNA 247

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
             +  Y       + E CSP  L HAVL VGY  ++ +PYW+++NSWG    + G+F++ 
Sbjct: 248 GYLQFYQSGISHPSYEECSPASLNHAVLTVGYDTENGVPYWIIKNSWGTGWGENGYFRLY 307

Query: 940 RGNNACGIEQIAGYATI 956
           RG+  CGI ++   A I
Sbjct: 308 RGDGTCGINRMITSAII 324



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 126/230 (54%), Gaps = 13/230 (5%)

Query: 4   EVEKDGPV-----PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEF 58
           +VE+  P      P+  DWR+    GP  +Q  CGSCWAFS+AG +EGQ+ +KTG+LV  
Sbjct: 100 QVERVRPTGLKAAPERMDWREWGAVGPVENQGSCGSCWAFSVAGNVEGQWFLKTGQLVSL 159

Query: 59  SKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL 117
           SK QLV+C     GC G +     +E     GLE + DYPY    G + +C  +K K  L
Sbjct: 160 SKQQLVDCDVMDYGCGGGWPTNAYMEIMRMGGLELQSDYPYV---GVQQQCYLNKEK--L 214

Query: 118 FTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 175
               D L   G+  E     L ++GPLS  LN+  +  Y       + E CSP  L HAV
Sbjct: 215 LAKIDDLIVLGAYEEEHAAYLAEHGPLSSALNAGYLQFYQSGISHPSYEECSPASLNHAV 274

Query: 176 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           L VGY  ++ +PYW+++NSWG    + G+F++ RG+  CGI ++   A I
Sbjct: 275 LTVGYDTENGVPYWIIKNSWGTGWGENGYFRLYRGDGTCGINRMITSAII 324



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 41/62 (66%)

Query: 963  ETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 1022
            E CSP  L HAVL VGY  ++ +PYW+++NSWG    + G+F++ RG+  CGI ++   A
Sbjct: 263  EECSPASLNHAVLTVGYDTENGVPYWIIKNSWGTGWGENGYFRLYRGDGTCGINRMITSA 322

Query: 1023 TI 1024
             I
Sbjct: 323  II 324


>gi|67773382|gb|AAY81948.1| cysteine protease 11 [Paragonimus westermani]
          Length = 322

 Score =  187 bits (474), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/315 (36%), Positives = 170/315 (53%), Gaps = 31/315 (9%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLVRAQKLQLRDQGTARYGVTQFSDLTPEEF 83

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG--PVPDAWDWRKKNVTGPAGDQAACG 764
             K         Y     + ++VE+    V+  G    P+  DWR K    P  +Q  CG
Sbjct: 84  AAK---------YLSPPLNSDQVER----VQPTGLKAAPERMDWRAKGAVTPVENQGECG 130

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS-IEYTHQAGLES 823
           SCWAFS AG +EGQ+ IKTG+LV  SK QLV+C     GC+G +   S +E     GLES
Sbjct: 131 SCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDMAAEGCNGGWPSSSYLEIMDMGGLES 190

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMK-KILYKYGPLSVLLNSDLI 882
           E DYPY    G +  CA +K K+ +    D +    SE      L ++GPLS LLN+  +
Sbjct: 191 ENDYPYV---GVEQTCALNKEKL-VAKIDDAVVLGASENEHVDYLAEHGPLSTLLNAVAL 246

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +  + + C   DL HAVL VGY ++ ++PYW+++NSWG    ++G+F++ RG+
Sbjct: 247 QHYQSGILHPSHKDCPDDDLNHAVLTVGYDREGDMPYWIIKNSWGTDWGEKGYFRLFRGD 306

Query: 943 NACGIEQIAGYATID 957
             CGI ++A  A I+
Sbjct: 307 CVCGINRMATSAVIN 321



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/315 (36%), Positives = 165/315 (52%), Gaps = 30/315 (9%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLVRAQKLQLRDQGTARYGVTQFSDLTPEEF 83

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG--PVPDAWDWRKKNVTGPAGDQAACG 398
             K         Y     + ++VE+    V+  G    P+  DWR K    P  +Q  CG
Sbjct: 84  AAK---------YLSPPLNSDQVER----VQPTGLKAAPERMDWRAKGAVTPVENQGECG 130

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS AG +EGQ+ IKTG+LV  SK QLV+C     GC G       +E     GLES
Sbjct: 131 SCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDMAAEGCNGGWPSSSYLEIMDMGGLES 190

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMK-KILYKYGPLSVGLNSHLI 517
           E DYPY    G +  CA +K K+ +    D +    SE      L ++GPLS  LN+  +
Sbjct: 191 ENDYPYV---GVEQTCALNKEKL-VAKIDDAVVLGASENEHVDYLAEHGPLSTLLNAVAL 246

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
             Y    +  + + C   DL HAVL VGY ++ D+PYW+ +NSWG    ++G+F++ RG+
Sbjct: 247 QHYQSGILHPSHKDCPDDDLNHAVLTVGYDREGDMPYWIIKNSWGTDWGEKGYFRLFRGD 306

Query: 578 NACGIEQIAGYATID 592
             CGI ++A  A I+
Sbjct: 307 CVCGINRMATSAVIN 321



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/218 (41%), Positives = 128/218 (58%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P+  DWR K    P  +Q +CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C    
Sbjct: 108 APERMDWRAKGAVTPVENQGECGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDMAA 167

Query: 71  SGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G +   S +E     GLESE DYPY    G +  CA +K K+ +    D +    S
Sbjct: 168 EGCNGGWPSSSYLEIMDMGGLESENDYPYV---GVEQTCALNKEKL-VAKIDDAVVLGAS 223

Query: 130 ETMK-KILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
           E      L ++GPLS LLN+  +  Y    +  + + C   DL HAVL VGY ++ ++PY
Sbjct: 224 ENEHVDYLAEHGPLSTLLNAVALQHYQSGILHPSHKDCPDDDLNHAVLTVGYDREGDMPY 283

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           W+++NSWG    ++G+F++ RG+  CGI ++A  A I+
Sbjct: 284 WIIKNSWGTDWGEKGYFRLFRGDCVCGINRMATSAVIN 321



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C   DL HAVL VGY ++ D+PYW+++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 261  CPDDDLNHAVLTVGYDREGDMPYWIIKNSWGTDWGEKGYFRLFRGDCVCGINRMATSAVI 320

Query: 1025 D 1025
            +
Sbjct: 321  N 321


>gi|324522685|gb|ADY48108.1| Cathepsin L, partial [Ascaris suum]
          Length = 308

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 162/316 (51%), Gaps = 27/316 (8%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEIL 341
           +   FI +  R Y+N +E+ +RF  +K         Q   +    YG ++FSD +  E  
Sbjct: 6   SVDGFIGRYNRTYSNKKEMLKRFRIYKRNLRAAKIWQANEQGTAIYGETQFSDLTQAEFR 65

Query: 342 -CKTGFKWSERTYERIVADREKVEKMLMEVEKDG----PVPDAWDWRKKNVTGPAGDQAA 396
                +KW          +  KV   +   ++ G     +P+++DWR+KN      +Q +
Sbjct: 66  KIMLPYKW----------ETPKVPNKMANFKEFGIAQNDIPESFDWREKNAVTEVKNQGS 115

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGL 456
           CGSCWAFS+ G +EG +AIKT KLV  S+ +LV+C     GC G        E     GL
Sbjct: 116 CGSCWAFSVTGNIEGAWAIKTSKLVSLSEQELVDCDIIDQGCNGGLPSNAYREIIRMGGL 175

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL 516
           E+E DYPY +G GE  KC   K  + ++        +  E M   L   GP+S+GLN++ 
Sbjct: 176 EAESDYPY-DGRGE--KCHLMKKDIAVYINDSLQLPHDEEKMAAWLVAKGPISIGLNANP 232

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
           + FY           CSP  L H VL+VGYG + D PYW+ +NSWG    +EG+F++ RG
Sbjct: 233 LQFYRHGIAHPWRVFCSPKHLDHGVLIVGYGSETDKPYWIIKNSWGTKWGEEGYFRLFRG 292

Query: 577 NNACGIEQIAGYATID 592
            N CGI+++A  A I+
Sbjct: 293 KNVCGIQEMATTAIIE 308



 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 162/318 (50%), Gaps = 32/318 (10%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEIL 707
           +   FI +  R Y+N +E+ +RF  +K         Q   +    YG ++FSD +  E  
Sbjct: 6   SVDGFIGRYNRTYSNKKEMLKRFRIYKRNLRAAKIWQANEQGTAIYGETQFSDLTQAEFR 65

Query: 708 -CKTGFKWSERTYERIVADREKVEKMLMEVEKDG----PVPDAWDWRKKNVTGPAGDQAA 762
                +KW          +  KV   +   ++ G     +P+++DWR+KN      +Q +
Sbjct: 66  KIMLPYKW----------ETPKVPNKMANFKEFGIAQNDIPESFDWREKNAVTEVKNQGS 115

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQA 819
           CGSCWAFS+ G +EG +AIKT KLV  S+ +LV+C     GC+G    PS  Y       
Sbjct: 116 CGSCWAFSVTGNIEGAWAIKTSKLVSLSEQELVDCDIIDQGCNGGL--PSNAYREIIRMG 173

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GLE+E DYPY   +G   KC   K  + ++        +  E M   L   GP+S+ LN+
Sbjct: 174 GLEAESDYPY---DGRGEKCHLMKKDIAVYINDSLQLPHDEEKMAAWLVAKGPISIGLNA 230

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           + +  Y           CSP  L H VL+VGYG + + PYW+++NSWG    +EG+F++ 
Sbjct: 231 NPLQFYRHGIAHPWRVFCSPKHLDHGVLIVGYGSETDKPYWIIKNSWGTKWGEEGYFRLF 290

Query: 940 RGNNACGIEQIAGYATID 957
           RG N CGI+++A  A I+
Sbjct: 291 RGKNVCGIQEMATTAIIE 308



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+++DWR+KN      +Q  CGSCWAFS+ G +EG +AIKT KLV  S+ +LV+C    
Sbjct: 95  IPESFDWREKNAVTEVKNQGSCGSCWAFSVTGNIEGAWAIKTSKLVSLSEQELVDCDIID 154

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC+G    PS  Y       GLE+E DYPY   +G   KC   K  + ++        +
Sbjct: 155 QGCNGGL--PSNAYREIIRMGGLEAESDYPY---DGRGEKCHLMKKDIAVYINDSLQLPH 209

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E M   L   GP+S+ LN++ +  Y           CSP  L H VL+VGYG + + P
Sbjct: 210 DEEKMAAWLVAKGPISIGLNANPLQFYRHGIAHPWRVFCSPKHLDHGVLIVGYGSETDKP 269

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW+++NSWG    +EG+F++ RG N CGI+++A  A I+
Sbjct: 270 YWIIKNSWGTKWGEEGYFRLFRGKNVCGIQEMATTAIIE 308



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP  L H VL+VGYG + D PYW+++NSWG    +EG+F++ RG N CGI+++A  A I
Sbjct: 248  CSPKHLDHGVLIVGYGSETDKPYWIIKNSWGTKWGEEGYFRLFRGKNVCGIQEMATTAII 307

Query: 1025 D 1025
            +
Sbjct: 308  E 308


>gi|393906608|gb|EFO21301.2| ctsf protein [Loa loa]
          Length = 472

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 172/317 (54%), Gaps = 18/317 (5%)

Query: 285 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH----KKHER-----YGTSEFSDR 335
            E +  +F  FI K  R+Y++  E  +RF+ + Q+ H     +HE      YG ++FSD 
Sbjct: 163 TEMLWNSFLDFIKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDM 222

Query: 336 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
           SPEE   KT        ++R+V++  + +     +  +  +P+ +DWR K V  P  +Q 
Sbjct: 223 SPEE-FQKTML--PSLWWDRVVSNGVEYDLKKFNLTFNN-LPEQFDWRTKGVVTPVKNQG 278

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAG 455
           +CGSCWAFS+ G +EG +AIKTGKL+  S+ +L++C +   GC G   +    E     G
Sbjct: 279 SCGSCWAFSVTGNIEGLWAIKTGKLISLSEQELIDCDRIDKGCNGGLPINAFREIQRMGG 338

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNS 514
           LE E  YPY+  NG    C   +S + + T  D +    +ET MK  + + GPLSVG+++
Sbjct: 339 LEPEDQYPYKARNG---TCHLIRSAIAV-TIDDAVEIPRNETVMKAWIVQRGPLSVGIDA 394

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
            L+ +Y    +  +   C P  + H VL+ GYG ++ +PYW  +NSWG    ++G+F++ 
Sbjct: 395 KLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENGLPYWTIKNSWGDQWGEDGYFRLM 454

Query: 575 RGNNACGIEQIAGYATI 591
            G + CG+  +   A I
Sbjct: 455 LGKDVCGVSDLVSSAII 471



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 171/317 (53%), Gaps = 19/317 (5%)

Query: 651 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH----KKHER-----YGTSEFSDR 701
            E +  +F  FI K  R+Y++  E  +RF+ + Q+ H     +HE      YG ++FSD 
Sbjct: 163 TEMLWNSFLDFIKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDM 222

Query: 702 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
           SPEE   KT        ++R+V++  + +     +  +  +P+ +DWR K V  P  +Q 
Sbjct: 223 SPEE-FQKTML--PSLWWDRVVSNGVEYDLKKFNLTFNN-LPEQFDWRTKGVVTPVKNQG 278

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAG 820
           +CGSCWAFS+ G +EG +AIKTGKL+  S+ +L++C +   GC+G        E     G
Sbjct: 279 SCGSCWAFSVTGNIEGLWAIKTGKLISLSEQELIDCDRIDKGCNGGLPINAFREIQRMGG 338

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNS 879
           LE E  YPYK  NG    C   +S + + T  D +    +ET MK  + + GPLSV +++
Sbjct: 339 LEPEDQYPYKARNG---TCHLIRSAIAV-TIDDAVEIPRNETVMKAWIVQRGPLSVGIDA 394

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
            L+  Y    +  +   C P  + H VL+ GYG ++ +PYW ++NSWG    ++G+F++ 
Sbjct: 395 KLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENGLPYWTIKNSWGDQWGEDGYFRLM 454

Query: 940 RGNNACGIEQIAGYATI 956
            G + CG+  +   A I
Sbjct: 455 LGKDVCGVSDLVSSAII 471



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 122/217 (56%), Gaps = 6/217 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR K V  P  +Q  CGSCWAFS+ G +EG +AIKTGKL+  S+ +L++C +  
Sbjct: 259 LPEQFDWRTKGVVTPVKNQGSCGSCWAFSVTGNIEGLWAIKTGKLISLSEQELIDCDRID 318

Query: 71  SGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G        E     GLE E  YPYK  NG    C   +S + + T  D +    +
Sbjct: 319 KGCNGGLPINAFREIQRMGGLEPEDQYPYKARNG---TCHLIRSAIAV-TIDDAVEIPRN 374

Query: 130 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
           ET MK  + + GPLSV +++ L+  Y    +  +   C P  + H VL+ GYG ++ +PY
Sbjct: 375 ETVMKAWIVQRGPLSVGIDAKLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENGLPY 434

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W ++NSWG    ++G+F++  G + CG+  +   A I
Sbjct: 435 WTIKNSWGDQWGEDGYFRLMLGKDVCGVSDLVSSAII 471



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 938  IERGNNACGIEQ--IAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWG 995
            ++RG  + GI+   +A Y +  +  +   C P  + H VL+ GYG ++ +PYW ++NSWG
Sbjct: 383  VQRGPLSVGIDAKLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENGLPYWTIKNSWG 442

Query: 996  PIGPDEGFFKIERGNNACGIEQIAGYATI 1024
                ++G+F++  G + CG+  +   A I
Sbjct: 443  DQWGEDGYFRLMLGKDVCGVSDLVSSAII 471


>gi|67773376|gb|AAY81945.1| cysteine protease 7 [Paragonimus westermani]
          Length = 325

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/315 (34%), Positives = 158/315 (50%), Gaps = 25/315 (7%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRS 336
           +N  E ++ F    G+ YAN+++ K RF  FK +  +  +         +YG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQMQEQGTAKYGVTQFSDLT 84

Query: 337 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
           PEE           R  ER+  DR ++  +          P + DWRKK   GP  DQ +
Sbjct: 85  PEEF---AAMYLGSRIDERV--DRVQLNDLQT-------APASVDWRKKGAVGPVEDQGS 132

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGL 456
           CGSCWAFS+   +EGQ+ +KTG+LV  SK QLV+C +   GC G        E     GL
Sbjct: 133 CGSCWAFSVTANVEGQWFLKTGRLVSLSKQQLVDCDRLDHGCSGGYPPYTYKEIKRMGGL 192

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL 516
           E +  YPY +    K  C  D+SK+        +     E     L ++GP+S  LN+  
Sbjct: 193 ELQSAYPYTSW---KQACRIDRSKLVAKIDDSIVLETDEEKQAAWLAEHGPMSTCLNAGP 249

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
           + FY    +  +   CSP  L HAVL VGY  +  +PYW  RNSWG    + G+F+I RG
Sbjct: 250 LQFYQSGILHPSKAMCSPEGLNHAVLTVGYDTEHGVPYWTVRNSWGTRWGENGYFRIYRG 309

Query: 577 NNACGIEQIAGYATI 591
           +  CGI+++   A I
Sbjct: 310 DGTCGIDRLTTSAII 324



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/317 (35%), Positives = 160/317 (50%), Gaps = 30/317 (9%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRS 702
           +N  E ++ F    G+ YAN+++ K RF  FK +  +  +         +YG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQMQEQGTAKYGVTQFSDLT 84

Query: 703 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
           PEE           R  ER+  DR ++  +          P + DWRKK   GP  DQ +
Sbjct: 85  PEEF---AAMYLGSRIDERV--DRVQLNDLQT-------APASVDWRKKGAVGPVEDQGS 132

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQA 819
           CGSCWAFS+   +EGQ+ +KTG+LV  SK QLV+C +   GC G +  P   Y       
Sbjct: 133 CGSCWAFSVTANVEGQWFLKTGRLVSLSKQQLVDCDRLDHGCSGGY--PPYTYKEIKRMG 190

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GLE +  YPY +    K  C  D+SK+        +     E     L ++GP+S  LN+
Sbjct: 191 GLELQSAYPYTSW---KQACRIDRSKLVAKIDDSIVLETDEEKQAAWLAEHGPMSTCLNA 247

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
             +  Y    +  +   CSP  L HAVL VGY  +  +PYW VRNSWG    + G+F+I 
Sbjct: 248 GPLQFYQSGILHPSKAMCSPEGLNHAVLTVGYDTEHGVPYWTVRNSWGTRWGENGYFRIY 307

Query: 940 RGNNACGIEQIAGYATI 956
           RG+  CGI+++   A I
Sbjct: 308 RGDGTCGIDRLTTSAII 324



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 116/218 (53%), Gaps = 8/218 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P + DWRKK   GP  DQ  CGSCWAFS+   +EGQ+ +KTG+LV  SK QLV+C +  
Sbjct: 112 APASVDWRKKGAVGPVEDQGSCGSCWAFSVTANVEGQWFLKTGRLVSLSKQQLVDCDRLD 171

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC G +  P   Y       GLE +  YPY +    K  C  D+SK+        +   
Sbjct: 172 HGCSGGY--PPYTYKEIKRMGGLELQSAYPYTSW---KQACRIDRSKLVAKIDDSIVLET 226

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E     L ++GP+S  LN+  +  Y    +  +   CSP  L HAVL VGY  +  +P
Sbjct: 227 DEEKQAAWLAEHGPMSTCLNAGPLQFYQSGILHPSKAMCSPEGLNHAVLTVGYDTEHGVP 286

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           YW VRNSWG    + G+F+I RG+  CGI+++   A I
Sbjct: 287 YWTVRNSWGTRWGENGYFRIYRGDGTCGIDRLTTSAII 324



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP  L HAVL VGY  +  +PYW VRNSWG    + G+F+I RG+  CGI+++   A I
Sbjct: 265  CSPEGLNHAVLTVGYDTEHGVPYWTVRNSWGTRWGENGYFRIYRGDGTCGIDRLTTSAII 324


>gi|195111686|ref|XP_002000409.1| GI10216 [Drosophila mojavensis]
 gi|193917003|gb|EDW15870.1| GI10216 [Drosophila mojavensis]
          Length = 605

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/319 (35%), Positives = 171/319 (53%), Gaps = 32/319 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQ---------DGHKKHERYGTSEFSDRSPEEILC 342
           F  F +K  R+YAN  E + R   F+Q         D  +   +YG +EF+D +  E   
Sbjct: 299 FHVFQIKYKRRYANSMEHQMRLRIFRQNLRTIQELNDNEQGSAKYGITEFADMTSSEYTQ 358

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           + G  W +R+  +    +  V          G +P  +DWR+KN      +Q +CGSCWA
Sbjct: 359 RAGL-W-QRSANKPTGGKPAVVPAY-----KGELPKEFDWREKNAVTQVKNQGSCGSCWA 411

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS+ G +EG YAIKTG+L EFS+ +L++C    S C G   D   + I+     GLE E 
Sbjct: 412 FSVTGNIEGLYAIKTGELREFSEQELLDCDSTDSACNGGLMDNAYKAIKDI--GGLEYES 469

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSET-MKKILYKYGPLSVGLNSHLIH 518
           +YPY     +K +C ++K+   +    DF+    G+ET M++ L   GP+S+GLN++ + 
Sbjct: 470 EYPYL---AKKKQCHFNKTLSHVQVA-DFVDLPKGNETAMQEWLLANGPISIGLNANAMQ 525

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFK 572
           FY G         CS  +L H VL+VGYG  D       +PYW+ +NSWGP   ++G+++
Sbjct: 526 FYRGGVSHPWGPLCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYR 585

Query: 573 IERGNNACGIEQIAGYATI 591
           I RG+N CG+ ++A  A +
Sbjct: 586 IYRGDNTCGVSEMATSAVL 604



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 170/317 (53%), Gaps = 29/317 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQ---------DGHKKHERYGTSEFSDRSPEEILC 708
           F  F +K  R+YAN  E + R   F+Q         D  +   +YG +EF+D +  E   
Sbjct: 299 FHVFQIKYKRRYANSMEHQMRLRIFRQNLRTIQELNDNEQGSAKYGITEFADMTSSEYTQ 358

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           + G  W +R+  +    +  V          G +P  +DWR+KN      +Q +CGSCWA
Sbjct: 359 RAGL-W-QRSANKPTGGKPAVVPAY-----KGELPKEFDWREKNAVTQVKNQGSCGSCWA 411

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           FS+ G +EG YAIKTG+L EFS+ +L++C    S C+G   + + +      GLE E +Y
Sbjct: 412 FSVTGNIEGLYAIKTGELREFSEQELLDCDSTDSACNGGLMDNAYKAIKDIGGLEYESEY 471

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLNSDLIHDY 885
           PY     +K +C ++K+   +    DF+    G+ET M++ L   GP+S+ LN++ +  Y
Sbjct: 472 PYL---AKKKQCHFNKTLSHVQVA-DFVDLPKGNETAMQEWLLANGPISIGLNANAMQFY 527

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIE 939
            G         CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G+++I 
Sbjct: 528 RGGVSHPWGPLCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRIY 587

Query: 940 RGNNACGIEQIAGYATI 956
           RG+N CG+ ++A  A +
Sbjct: 588 RGDNTCGVSEMATSAVL 604



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 133/226 (58%), Gaps = 13/226 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P  +DWR+KN      +Q  CGSCWAFS+ G +EG YAIKTG+L EFS+ +L++C  
Sbjct: 383 GELPKEFDWREKNAVTQVKNQGSCGSCWAFSVTGNIEGLYAIKTGELREFSEQELLDCDS 442

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             S C+G   + + +      GLE E +YPY     +K +C ++K+   +    DF+   
Sbjct: 443 TDSACNGGLMDNAYKAIKDIGGLEYESEYPYL---AKKKQCHFNKTLSHVQVA-DFVDLP 498

Query: 127 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD- 184
            G+ET M++ L   GP+S+ LN++ +  Y G         CS  +L H VL+VGYG  D 
Sbjct: 499 KGNETAMQEWLLANGPISIGLNANAMQFYRGGVSHPWGPLCSKKNLDHGVLIVGYGVSDY 558

Query: 185 -----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                 +PYW+V+NSWGP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 559 PNFHKTLPYWIVKNSWGPRWGEQGYYRIYRGDNTCGVSEMATSAVL 604


>gi|195152617|ref|XP_002017233.1| GL22196 [Drosophila persimilis]
 gi|194112290|gb|EDW34333.1| GL22196 [Drosophila persimilis]
          Length = 627

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 170/318 (53%), Gaps = 30/318 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           F  F ++ GR+Y N  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 321 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 380

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +TG  W +R  ++       V         +G  P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 381 RTGL-W-QRDEQKPTGGAPAVVPAY-----EGEFPKEFDWRQKNAVTPVKNQGSCGSCWA 433

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS+ G +EG YA+KTG+L EFS+ +L++C    S C G   D   + I+     GLE E 
Sbjct: 434 FSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDI--GGLEYEA 491

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHF 519
           +YPY     +K +C ++++   +          G+ET M++ L  +GP+S+GLN++ + F
Sbjct: 492 EYPYE---AKKQQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQF 548

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKI 573
           Y G         CS  +L H VL+VGYG  D       +PYW+ +NSWGP   ++G++++
Sbjct: 549 YRGGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRV 608

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+N CG+ ++A  A +
Sbjct: 609 YRGDNTCGVSEMATSAVL 626



 Score =  182 bits (462), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 170/316 (53%), Gaps = 27/316 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           F  F ++ GR+Y N  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 321 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 380

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +TG  W +R  ++       V         +G  P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 381 RTGL-W-QRDEQKPTGGAPAVVPAY-----EGEFPKEFDWRQKNAVTPVKNQGSCGSCWA 433

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           FS+ G +EG YA+KTG+L EFS+ +L++C    S C+G   + + +      GLE E +Y
Sbjct: 434 FSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEY 493

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYN 886
           PY+    +K +C ++++   +          G+ET M++ L  +GP+S+ LN++ +  Y 
Sbjct: 494 PYE---AKKQQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFYR 550

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIER 940
           G         CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G++++ R
Sbjct: 551 GGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYR 610

Query: 941 GNNACGIEQIAGYATI 956
           G+N CG+ ++A  A +
Sbjct: 611 GDNTCGVSEMATSAVL 626



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 133/226 (58%), Gaps = 11/226 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  P  +DWR+KN   P  +Q  CGSCWAFS+ G +EG YA+KTG+L EFS+ +L++C 
Sbjct: 404 EGEFPKEFDWRQKNAVTPVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD 463

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
              S C+G   + + +      GLE E +YPY+    +K +C ++++   +         
Sbjct: 464 TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYE---AKKQQCHFNRTLSHVQVSGFVDLP 520

Query: 127 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD- 184
            G+ET M++ L  +GP+S+ LN++ +  Y G         CS  +L H VL+VGYG  D 
Sbjct: 521 KGNETAMQEWLLTHGPISIGLNANAMQFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDY 580

Query: 185 -----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                 +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 581 PNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 626



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 21/112 (18%)

Query: 934  GFFKIERGNNACGIEQIAGYATIDVVKNDET---------------CSPYDLGHAVLLVG 978
            GF  + +GN     E +  +  I +  N                  CS  +L H VL+VG
Sbjct: 515  GFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFYRGGVSHPWKALCSKKNLDHGVLIVG 574

Query: 979  YGKQD------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            YG  D       +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 575  YGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 626


>gi|312080834|ref|XP_003142769.1| ctsf protein [Loa loa]
          Length = 437

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 172/317 (54%), Gaps = 18/317 (5%)

Query: 285 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH----KKHER-----YGTSEFSDR 335
            E +  +F  FI K  R+Y++  E  +RF+ + Q+ H     +HE      YG ++FSD 
Sbjct: 128 TEMLWNSFLDFIKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDM 187

Query: 336 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
           SPEE   KT        ++R+V++  + +     +  +  +P+ +DWR K V  P  +Q 
Sbjct: 188 SPEE-FQKTML--PSLWWDRVVSNGVEYDLKKFNLTFNN-LPEQFDWRTKGVVTPVKNQG 243

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAG 455
           +CGSCWAFS+ G +EG +AIKTGKL+  S+ +L++C +   GC G   +    E     G
Sbjct: 244 SCGSCWAFSVTGNIEGLWAIKTGKLISLSEQELIDCDRIDKGCNGGLPINAFREIQRMGG 303

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNS 514
           LE E  YPY+  NG    C   +S + + T  D +    +ET MK  + + GPLSVG+++
Sbjct: 304 LEPEDQYPYKARNG---TCHLIRSAIAV-TIDDAVEIPRNETVMKAWIVQRGPLSVGIDA 359

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
            L+ +Y    +  +   C P  + H VL+ GYG ++ +PYW  +NSWG    ++G+F++ 
Sbjct: 360 KLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENGLPYWTIKNSWGDQWGEDGYFRLM 419

Query: 575 RGNNACGIEQIAGYATI 591
            G + CG+  +   A I
Sbjct: 420 LGKDVCGVSDLVSSAII 436



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 171/317 (53%), Gaps = 19/317 (5%)

Query: 651 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH----KKHER-----YGTSEFSDR 701
            E +  +F  FI K  R+Y++  E  +RF+ + Q+ H     +HE      YG ++FSD 
Sbjct: 128 TEMLWNSFLDFIKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDM 187

Query: 702 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
           SPEE   KT        ++R+V++  + +     +  +  +P+ +DWR K V  P  +Q 
Sbjct: 188 SPEE-FQKTML--PSLWWDRVVSNGVEYDLKKFNLTFNN-LPEQFDWRTKGVVTPVKNQG 243

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAG 820
           +CGSCWAFS+ G +EG +AIKTGKL+  S+ +L++C +   GC+G        E     G
Sbjct: 244 SCGSCWAFSVTGNIEGLWAIKTGKLISLSEQELIDCDRIDKGCNGGLPINAFREIQRMGG 303

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNS 879
           LE E  YPYK  NG    C   +S + + T  D +    +ET MK  + + GPLSV +++
Sbjct: 304 LEPEDQYPYKARNG---TCHLIRSAIAV-TIDDAVEIPRNETVMKAWIVQRGPLSVGIDA 359

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
            L+  Y    +  +   C P  + H VL+ GYG ++ +PYW ++NSWG    ++G+F++ 
Sbjct: 360 KLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENGLPYWTIKNSWGDQWGEDGYFRLM 419

Query: 940 RGNNACGIEQIAGYATI 956
            G + CG+  +   A I
Sbjct: 420 LGKDVCGVSDLVSSAII 436



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 122/217 (56%), Gaps = 6/217 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR K V  P  +Q  CGSCWAFS+ G +EG +AIKTGKL+  S+ +L++C +  
Sbjct: 224 LPEQFDWRTKGVVTPVKNQGSCGSCWAFSVTGNIEGLWAIKTGKLISLSEQELIDCDRID 283

Query: 71  SGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G        E     GLE E  YPYK  NG    C   +S + + T  D +    +
Sbjct: 284 KGCNGGLPINAFREIQRMGGLEPEDQYPYKARNG---TCHLIRSAIAV-TIDDAVEIPRN 339

Query: 130 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
           ET MK  + + GPLSV +++ L+  Y    +  +   C P  + H VL+ GYG ++ +PY
Sbjct: 340 ETVMKAWIVQRGPLSVGIDAKLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENGLPY 399

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W ++NSWG    ++G+F++  G + CG+  +   A I
Sbjct: 400 WTIKNSWGDQWGEDGYFRLMLGKDVCGVSDLVSSAII 436



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 938  IERGNNACGIEQ--IAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWG 995
            ++RG  + GI+   +A Y +  +  +   C P  + H VL+ GYG ++ +PYW ++NSWG
Sbjct: 348  VQRGPLSVGIDAKLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENGLPYWTIKNSWG 407

Query: 996  PIGPDEGFFKIERGNNACGIEQIAGYATI 1024
                ++G+F++  G + CG+  +   A I
Sbjct: 408  DQWGEDGYFRLMLGKDVCGVSDLVSSAII 436


>gi|198453932|ref|XP_002137768.1| GA27408, isoform A [Drosophila pseudoobscura pseudoobscura]
 gi|198132577|gb|EDY68326.1| GA27408, isoform A [Drosophila pseudoobscura pseudoobscura]
          Length = 629

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 170/318 (53%), Gaps = 30/318 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           F  F ++ GR+Y N  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 323 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 382

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +TG  W +R  ++       V         +G  P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 383 RTGL-W-QRDEQKPTGGAPAVVPAY-----EGEFPKEFDWRQKNAVTPVKNQGSCGSCWA 435

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS+ G +EG YA+KTG+L EFS+ +L++C    S C G   D   + I+     GLE E 
Sbjct: 436 FSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDI--GGLEYEA 493

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHF 519
           +YPY     +K +C ++++   +          G+ET M++ L  +GP+S+GLN++ + F
Sbjct: 494 EYPYE---AKKQQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQF 550

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKI 573
           Y G         CS  +L H VL+VGYG  D       +PYW+ +NSWGP   ++G++++
Sbjct: 551 YRGGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRV 610

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+N CG+ ++A  A +
Sbjct: 611 YRGDNTCGVSEMATSAVL 628



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 170/316 (53%), Gaps = 27/316 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           F  F ++ GR+Y N  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 323 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 382

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +TG  W +R  ++       V         +G  P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 383 RTGL-W-QRDEQKPTGGAPAVVPAY-----EGEFPKEFDWRQKNAVTPVKNQGSCGSCWA 435

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           FS+ G +EG YA+KTG+L EFS+ +L++C    S C+G   + + +      GLE E +Y
Sbjct: 436 FSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEY 495

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYN 886
           PY+    +K +C ++++   +          G+ET M++ L  +GP+S+ LN++ +  Y 
Sbjct: 496 PYE---AKKQQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFYR 552

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIER 940
           G         CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G++++ R
Sbjct: 553 GGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYR 612

Query: 941 GNNACGIEQIAGYATI 956
           G+N CG+ ++A  A +
Sbjct: 613 GDNTCGVSEMATSAVL 628



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 133/226 (58%), Gaps = 11/226 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  P  +DWR+KN   P  +Q  CGSCWAFS+ G +EG YA+KTG+L EFS+ +L++C 
Sbjct: 406 EGEFPKEFDWRQKNAVTPVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD 465

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
              S C+G   + + +      GLE E +YPY+    +K +C ++++   +         
Sbjct: 466 TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYE---AKKQQCHFNRTLSHVQVSGFVDLP 522

Query: 127 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD- 184
            G+ET M++ L  +GP+S+ LN++ +  Y G         CS  +L H VL+VGYG  D 
Sbjct: 523 KGNETAMQEWLLTHGPISIGLNANAMQFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDY 582

Query: 185 -----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                 +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 583 PNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 628



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 21/112 (18%)

Query: 934  GFFKIERGNNACGIEQIAGYATIDVVKNDET---------------CSPYDLGHAVLLVG 978
            GF  + +GN     E +  +  I +  N                  CS  +L H VL+VG
Sbjct: 517  GFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFYRGGVSHPWKALCSKKNLDHGVLIVG 576

Query: 979  YGKQD------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            YG  D       +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 577  YGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 628


>gi|244790093|ref|NP_001156453.1| cathepsin F isoform 1 precursor [Acyrthosiphon pisum]
          Length = 586

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/337 (34%), Positives = 171/337 (50%), Gaps = 34/337 (10%)

Query: 279 GSLTFDNENI-----LET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHER- 326
           G LT    NI     L+T F+ FI+   + Y + EE   RF  F  +  K      HE+ 
Sbjct: 261 GKLTTKKNNIDDRLQLKTDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQG 320

Query: 327 ---YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEV-EKDGPVPDAWDW 382
              YG ++F+D      L K  FK   + Y  + +     + + M V  +   +P+ +DW
Sbjct: 321 SAIYGATQFAD------LTKNEFK---KKYLGLDSSMTSKKTLPMAVIPQSASIPNEFDW 371

Query: 383 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCD 442
           R  NV  P  +Q ACGSCWAFS    +EGQYA+K+ +L+  S+ +L++C    +GCGG  
Sbjct: 372 RNHNVVTPVKNQGACGSCWAFSAIANIEGQYALKSKELLSLSEQELIDCDNLDNGCGG-G 430

Query: 443 GLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKI 501
            + Q  E      GLE+E DYPY  G+ ++  C   KS VK+   K        E + K 
Sbjct: 431 LMTQAFEAVENLGGLETESDYPYE-GHADRKGCQLKKSDVKVSISKAVNVSTDEEDIAKF 489

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYW 555
           L K+GPLSVG+N++ + FY G         CSP  L H V +VGYG          +P+W
Sbjct: 490 LVKHGPLSVGVNANAMQFYMGGVSHPIHALCSPKSLDHGVAIVGYGVHKYPYLNATLPFW 549

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
             +NSWG     +G++ + RG+ +CG+ Q+   A I+
Sbjct: 550 TIKNSWGDKWGMQGYYLLYRGDGSCGVNQMVSSAIIE 586



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 168/336 (50%), Gaps = 33/336 (9%)

Query: 645 GSLTFDNENI-----LET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHER- 692
           G LT    NI     L+T F+ FI+   + Y + EE   RF  F  +  K      HE+ 
Sbjct: 261 GKLTTKKNNIDDRLQLKTDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQG 320

Query: 693 ---YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEV-EKDGPVPDAWDW 748
              YG ++F+D      L K  FK   + Y  + +     + + M V  +   +P+ +DW
Sbjct: 321 SAIYGATQFAD------LTKNEFK---KKYLGLDSSMTSKKTLPMAVIPQSASIPNEFDW 371

Query: 749 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF 808
           R  NV  P  +Q ACGSCWAFS    +EGQYA+K+ +L+  S+ +L++C    +GC G  
Sbjct: 372 RNHNVVTPVKNQGACGSCWAFSAIANIEGQYALKSKELLSLSEQELIDCDNLDNGCGGGL 431

Query: 809 FEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 867
              + E      GLE+E DYPY+  + ++  C   KS VK+   K        E + K L
Sbjct: 432 MTQAFEAVENLGGLETESDYPYE-GHADRKGCQLKKSDVKVSISKAVNVSTDEEDIAKFL 490

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWL 921
            K+GPLSV +N++ +  Y G         CSP  L H V +VGYG          +P+W 
Sbjct: 491 VKHGPLSVGVNANAMQFYMGGVSHPIHALCSPKSLDHGVAIVGYGVHKYPYLNATLPFWT 550

Query: 922 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           ++NSWG     +G++ + RG+ +CG+ Q+   A I+
Sbjct: 551 IKNSWGDKWGMQGYYLLYRGDGSCGVNQMVSSAIIE 586



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 123/229 (53%), Gaps = 8/229 (3%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           + +   +P+ +DWR  NV  P  +Q  CGSCWAFS    +EGQYA+K+ +L+  S+ +L+
Sbjct: 359 IPQSASIPNEFDWRNHNVVTPVKNQGACGSCWAFSAIANIEGQYALKSKELLSLSEQELI 418

Query: 65  ECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C    +GC G     + E      GLE+E DYPY+  + ++  C   KS VK+   K  
Sbjct: 419 DCDNLDNGCGGGLMTQAFEAVENLGGLETESDYPYE-GHADRKGCQLKKSDVKVSISKAV 477

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
                 E + K L K+GPLSV +N++ +  Y G         CSP  L H V +VGYG  
Sbjct: 478 NVSTDEEDIAKFLVKHGPLSVGVNANAMQFYMGGVSHPIHALCSPKSLDHGVAIVGYGVH 537

Query: 184 D------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
                   +P+W ++NSWG     +G++ + RG+ +CG+ Q+   A I+
Sbjct: 538 KYPYLNATLPFWTIKNSWGDKWGMQGYYLLYRGDGSCGVNQMVSSAIIE 586



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 965  CSPYDLGHAVLLVGYGKQD------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            CSP  L H V +VGYG          +P+W ++NSWG     +G++ + RG+ +CG+ Q+
Sbjct: 520  CSPKSLDHGVAIVGYGVHKYPYLNATLPFWTIKNSWGDKWGMQGYYLLYRGDGSCGVNQM 579

Query: 1019 AGYATID 1025
               A I+
Sbjct: 580  VSSAIIE 586


>gi|390178852|ref|XP_003736743.1| GA27408, isoform B [Drosophila pseudoobscura pseudoobscura]
 gi|388859612|gb|EIM52816.1| GA27408, isoform B [Drosophila pseudoobscura pseudoobscura]
          Length = 477

 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 170/318 (53%), Gaps = 30/318 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           F  F ++ GR+Y N  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 171 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 230

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +TG  W +R  ++       V         +G  P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 231 RTGL-W-QRDEQKPTGGAPAVVPAY-----EGEFPKEFDWRQKNAVTPVKNQGSCGSCWA 283

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS+ G +EG YA+KTG+L EFS+ +L++C    S C G   D   + I+     GLE E 
Sbjct: 284 FSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDI--GGLEYEA 341

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHF 519
           +YPY     +K +C ++++   +          G+ET M++ L  +GP+S+GLN++ + F
Sbjct: 342 EYPYE---AKKQQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQF 398

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKI 573
           Y G         CS  +L H VL+VGYG  D       +PYW+ +NSWGP   ++G++++
Sbjct: 399 YRGGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRV 458

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+N CG+ ++A  A +
Sbjct: 459 YRGDNTCGVSEMATSAVL 476



 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 170/316 (53%), Gaps = 27/316 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           F  F ++ GR+Y N  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 171 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 230

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +TG  W +R  ++       V         +G  P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 231 RTGL-W-QRDEQKPTGGAPAVVPAY-----EGEFPKEFDWRQKNAVTPVKNQGSCGSCWA 283

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           FS+ G +EG YA+KTG+L EFS+ +L++C    S C+G   + + +      GLE E +Y
Sbjct: 284 FSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEY 343

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYN 886
           PY+    +K +C ++++   +          G+ET M++ L  +GP+S+ LN++ +  Y 
Sbjct: 344 PYE---AKKQQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFYR 400

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIER 940
           G         CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G++++ R
Sbjct: 401 GGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYR 460

Query: 941 GNNACGIEQIAGYATI 956
           G+N CG+ ++A  A +
Sbjct: 461 GDNTCGVSEMATSAVL 476



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 133/226 (58%), Gaps = 11/226 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  P  +DWR+KN   P  +Q  CGSCWAFS+ G +EG YA+KTG+L EFS+ +L++C 
Sbjct: 254 EGEFPKEFDWRQKNAVTPVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD 313

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
              S C+G   + + +      GLE E +YPY+    +K +C ++++   +         
Sbjct: 314 TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYE---AKKQQCHFNRTLSHVQVSGFVDLP 370

Query: 127 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD- 184
            G+ET M++ L  +GP+S+ LN++ +  Y G         CS  +L H VL+VGYG  D 
Sbjct: 371 KGNETAMQEWLLTHGPISIGLNANAMQFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDY 430

Query: 185 -----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                 +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 431 PNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 476



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 21/112 (18%)

Query: 934  GFFKIERGNNACGIEQIAGYATIDVVKNDET---------------CSPYDLGHAVLLVG 978
            GF  + +GN     E +  +  I +  N                  CS  +L H VL+VG
Sbjct: 365  GFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFYRGGVSHPWKALCSKKNLDHGVLIVG 424

Query: 979  YGKQD------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            YG  D       +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 425  YGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 476


>gi|431910221|gb|ELK13294.1| Cathepsin F [Pteropus alecto]
          Length = 458

 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 152/317 (47%), Gaps = 27/317 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F++   R Y   EE + R   F  +  +  +         RYG ++FSD + E
Sbjct: 157 VASIFKEFVITYNRTYETKEEAQWRMSVFINNMMRAQKIQALDRGTARYGVTKFSDLTEE 216

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +    + ++M + +   GP P  WDWR K       DQ  CG
Sbjct: 217 EF---------RTIYLNPLLKELRSKRMPLAMSVSGPAPPEWDWRNKGAVTKVKDQGMCG 267

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +K G L+  S+ +LV+C K    C G              GLE+
Sbjct: 268 SCWAFSVTGNVEGQWFLKRGDLLSLSEQELVDCDKLDKACLGGLPSNAYSAIKTLGGLET 327

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY Y   NG    C +   K K++           + +   L K GP+S+ +N+  + 
Sbjct: 328 EDDYGY---NGHLQTCNFSAEKAKVYINDSVELSQNEQKLAAWLAKNGPISIAINAFGMQ 384

Query: 519 FYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
           FY      P+R     CSP+ + HAVLLVGYG + DIP+W  +NSWG    +EG++ + R
Sbjct: 385 FYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEEGYYYLHR 441

Query: 576 GNNACGIEQIAGYATID 592
           G+ ACG+  +A  A ++
Sbjct: 442 GSGACGVNIMASSAVVN 458



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 156/319 (48%), Gaps = 32/319 (10%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F++   R Y   EE + R   F  +  +  +         RYG ++FSD + E
Sbjct: 157 VASIFKEFVITYNRTYETKEEAQWRMSVFINNMMRAQKIQALDRGTARYGVTKFSDLTEE 216

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +    + ++M + +   GP P  WDWR K       DQ  CG
Sbjct: 217 EF---------RTIYLNPLLKELRSKRMPLAMSVSGPAPPEWDWRNKGAVTKVKDQGMCG 267

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QAGL 821
           SCWAFS+ G +EGQ+ +K G L+  S+ +LV+C K    C G    PS  Y+      GL
Sbjct: 268 SCWAFSVTGNVEGQWFLKRGDLLSLSEQELVDCDKLDKACLGGL--PSNAYSAIKTLGGL 325

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y   NG    C +   K K++           + +   L K GP+S+ +N+  
Sbjct: 326 ETEDDYGY---NGHLQTCNFSAEKAKVYINDSVELSQNEQKLAAWLAKNGPISIAINAFG 382

Query: 882 IHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +  Y      P+R     CSP+ + HAVLLVGYG + +IP+W ++NSWG    +EG++ +
Sbjct: 383 MQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEEGYYYL 439

Query: 939 ERGNNACGIEQIAGYATID 957
            RG+ ACG+  +A  A ++
Sbjct: 440 HRGSGACGVNIMASSAVVN 458



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 124/232 (53%), Gaps = 14/232 (6%)

Query: 1   MLMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
           M + +   GP P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +K G L+  S+
Sbjct: 235 MPLAMSVSGPAPPEWDWRNKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLKRGDLLSLSE 294

Query: 61  SQLVECAKQCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKL 117
            +LV+C K    C G    PS  Y+      GLE+E DY Y   NG    C +   K K+
Sbjct: 295 QELVDCDKLDKACLGGL--PSNAYSAIKTLGGLETEDDYGY---NGHLQTCNFSAEKAKV 349

Query: 118 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHA 174
           +           + +   L K GP+S+ +N+  +  Y      P+R     CSP+ + HA
Sbjct: 350 YINDSVELSQNEQKLAAWLAKNGPISIAINAFGMQFYRHGISHPLRP---LCSPWLIDHA 406

Query: 175 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           VLLVGYG + +IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 407 VLLVGYGNRSDIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNIMASSAVVN 458



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + DIP+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 398  CSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNIMASSAVV 457

Query: 1025 D 1025
            +
Sbjct: 458  N 458


>gi|67773378|gb|AAY81946.1| cysteine protease 8 [Paragonimus westermani]
          Length = 325

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 161/316 (50%), Gaps = 27/316 (8%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRS 336
           +N  E ++ F    G+ YAN+++ K RF  FK +  +  +         +YG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQMQEQGTAKYGVTQFSDLT 84

Query: 337 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
           PEE   K  G +  E+       DR ++  +          P + DWR+K   GP  +Q 
Sbjct: 85  PEEFEAKYLGLRIDEQV------DRVQLNDLQT-------APASVDWREKGAVGPIENQG 131

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAG 455
           +CGSCWAFS+ G +EGQ+ +KTG LV  SK QLV+C    +GC G        E     G
Sbjct: 132 SCGSCWAFSVVGNIEGQWFLKTGYLVSLSKQQLVDCDTVDNGCYGGYPPYTYKEIKRMGG 191

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           LE + DYPY    G    C  D+SK+        +     E     L ++GP+S  LN+ 
Sbjct: 192 LELQSDYPY---TGWGHGCRLDRSKLFAKIDDSIVLEADEEKQAAWLAEHGPMSTCLNAK 248

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + FY    +  +   CSP  L HAVL VGY  +  IPYW+ +NSWG    ++G+F+I R
Sbjct: 249 YLQFYQSGILHPSKAMCSPEGLNHAVLTVGYDTKHGIPYWIIKNSWGTSWGEDGYFRIYR 308

Query: 576 GNNACGIEQIAGYATI 591
           G+  CGI+++   A I
Sbjct: 309 GDGTCGIDRLTTSAII 324



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 163/318 (51%), Gaps = 32/318 (10%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRS 702
           +N  E ++ F    G+ YAN+++ K RF  FK +  +  +         +YG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQMQEQGTAKYGVTQFSDLT 84

Query: 703 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
           PEE   K  G +  E+       DR ++  +          P + DWR+K   GP  +Q 
Sbjct: 85  PEEFEAKYLGLRIDEQV------DRVQLNDLQT-------APASVDWREKGAVGPIENQG 131

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQ 818
           +CGSCWAFS+ G +EGQ+ +KTG LV  SK QLV+C    +GC G +  P   Y      
Sbjct: 132 SCGSCWAFSVVGNIEGQWFLKTGYLVSLSKQQLVDCDTVDNGCYGGY--PPYTYKEIKRM 189

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
            GLE + DYPY    G    C  D+SK+        +     E     L ++GP+S  LN
Sbjct: 190 GGLELQSDYPY---TGWGHGCRLDRSKLFAKIDDSIVLEADEEKQAAWLAEHGPMSTCLN 246

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +  +  Y    +  +   CSP  L HAVL VGY  +  IPYW+++NSWG    ++G+F+I
Sbjct: 247 AKYLQFYQSGILHPSKAMCSPEGLNHAVLTVGYDTKHGIPYWIIKNSWGTSWGEDGYFRI 306

Query: 939 ERGNNACGIEQIAGYATI 956
            RG+  CGI+++   A I
Sbjct: 307 YRGDGTCGIDRLTTSAII 324



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/218 (38%), Positives = 118/218 (54%), Gaps = 8/218 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P + DWR+K   GP  +Q  CGSCWAFS+ G +EGQ+ +KTG LV  SK QLV+C    
Sbjct: 112 APASVDWREKGAVGPIENQGSCGSCWAFSVVGNIEGQWFLKTGYLVSLSKQQLVDCDTVD 171

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G +  P   Y       GLE + DYPY    G    C  D+SK+        +   
Sbjct: 172 NGCYGGY--PPYTYKEIKRMGGLELQSDYPY---TGWGHGCRLDRSKLFAKIDDSIVLEA 226

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E     L ++GP+S  LN+  +  Y    +  +   CSP  L HAVL VGY  +  IP
Sbjct: 227 DEEKQAAWLAEHGPMSTCLNAKYLQFYQSGILHPSKAMCSPEGLNHAVLTVGYDTKHGIP 286

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           YW+++NSWG    ++G+F+I RG+  CGI+++   A I
Sbjct: 287 YWIIKNSWGTSWGEDGYFRIYRGDGTCGIDRLTTSAII 324



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP  L HAVL VGY  +  IPYW+++NSWG    ++G+F+I RG+  CGI+++   A I
Sbjct: 265  CSPEGLNHAVLTVGYDTKHGIPYWIIKNSWGTSWGEDGYFRIYRGDGTCGIDRLTTSAII 324


>gi|217323618|gb|ACK38176.1| midgut cysteine peptidase, partial [Sphenophorus levis]
          Length = 324

 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 159/312 (50%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSPEE 705
           F++F +K G+ Y N  E  +RF  F+++  K                 G ++F+D +  E
Sbjct: 26  FQSFKLKHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRAE 85

Query: 706 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
              K       +T   IVA +        ++     VP++ DWR +NV  P  DQA CGS
Sbjct: 86  F--KAMLATQVKTKPSIVATKT------FQLADGVSVPESIDWRSRNVVTPIKDQAQCGS 137

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-GCDGCFFEPSIEYTHQAGLESE 824
           CW+F++ G  EG YA+ TGKL  FS+ QLV+C    + GCDG + + +  Y    GLE E
Sbjct: 138 CWSFAVVGSTEGAYALSTGKLTRFSEQQLVDCTTDLNYGCDGGYLDDTFPYIQTNGLELE 197

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
            DYPY   +G    C+YD SKV              + + + +   GP+++ +N+D +  
Sbjct: 198 SDYPYTGYDG---SCSYDSSKVVTKVSSYVSVPANEQALLEAVGTAGPVAIAINADDLQF 254

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    I  +D+ C P  L H VL VGY  ++ + YWL++NSWG    + G+F+  RG N 
Sbjct: 255 YFSGII--DDKYCDPEWLDHGVLAVGYNSENGLDYWLIKNSWGADWGESGYFRFLRGQNI 312

Query: 945 CGIEQIAGYATI 956
           CG+++ A Y  I
Sbjct: 313 CGVKEDAVYPLI 324



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 157/314 (50%), Gaps = 29/314 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSPEE 339
           F++F +K G+ Y N  E  +RF  F+++  K                 G ++F+D +  E
Sbjct: 26  FQSFKLKHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRAE 85

Query: 340 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
              K       +T   IVA +        ++     VP++ DWR +NV  P  DQA CGS
Sbjct: 86  F--KAMLATQVKTKPSIVATKT------FQLADGVSVPESIDWRSRNVVTPIKDQAQCGS 137

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQAGLE 457
           CW+F++ G  EG YA+ TGKL  FS+ QLV+C    +   GCDG  L+    Y    GLE
Sbjct: 138 CWSFAVVGSTEGAYALSTGKLTRFSEQQLVDCTTDLN--YGCDGGYLDDTFPYIQTNGLE 195

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
            E DYPY   +G    C+YD SKV              + + + +   GP+++ +N+  +
Sbjct: 196 LESDYPYTGYDG---SCSYDSSKVVTKVSSYVSVPANEQALLEAVGTAGPVAIAINADDL 252

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY    I  +D+ C P  L H VL VGY  ++ + YWL +NSWG    + G+F+  RG 
Sbjct: 253 QFYFSGII--DDKYCDPEWLDHGVLAVGYNSENGLDYWLIKNSWGADWGESGYFRFLRGQ 310

Query: 578 NACGIEQIAGYATI 591
           N CG+++ A Y  I
Sbjct: 311 NICGVKEDAVYPLI 324



 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 123/216 (56%), Gaps = 6/216 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VP++ DWR +NV  P  DQA CGSCW+F++ G  EG YA+ TGKL  FS+ QLV+C    
Sbjct: 114 VPESIDWRSRNVVTPIKDQAQCGSCWSFAVVGSTEGAYALSTGKLTRFSEQQLVDCTTDL 173

Query: 71  S-GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           + GCDG + + +  Y    GLE E DYPY   +G    C+YD SKV              
Sbjct: 174 NYGCDGGYLDDTFPYIQTNGLELESDYPYTGYDG---SCSYDSSKVVTKVSSYVSVPANE 230

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           + + + +   GP+++ +N+D +  Y    I  +D+ C P  L H VL VGY  ++ + YW
Sbjct: 231 QALLEAVGTAGPVAIAINADDLQFYFSGII--DDKYCDPEWLDHGVLAVGYNSENGLDYW 288

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           L++NSWG    + G+F+  RG N CG+++ A Y  I
Sbjct: 289 LIKNSWGADWGESGYFRFLRGQNICGVKEDAVYPLI 324



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 41/66 (62%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            + +D+ C P  L H VL VGY  ++ + YWL++NSWG    + G+F+  RG N CG+++ 
Sbjct: 259  IIDDKYCDPEWLDHGVLAVGYNSENGLDYWLIKNSWGADWGESGYFRFLRGQNICGVKED 318

Query: 1019 AGYATI 1024
            A Y  I
Sbjct: 319  AVYPLI 324


>gi|194898683|ref|XP_001978897.1| GG11133 [Drosophila erecta]
 gi|190650600|gb|EDV47855.1| GG11133 [Drosophila erecta]
          Length = 615

 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 169/318 (53%), Gaps = 30/318 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           F  F V+ GR+Y +  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 309 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADLTSSEYKE 368

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +TG  W +R   +       V          G +P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 369 RTGL-W-QRDEAKATGGSAAVVPAY-----HGELPKEFDWRQKNAVTPVKNQGSCGSCWA 421

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS+ G +EG YA+KTG+L EFS+ +L++C    S C G   D   + I+     GLE E 
Sbjct: 422 FSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDI--GGLEYEA 479

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHF 519
           +YPY+    +K +C ++++   +          G+ET M++ L   GP+S+G+N++ + F
Sbjct: 480 EYPYK---AKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLTKGPISIGINANAMQF 536

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKI 573
           Y G         CS  +L H VL+VGYG  D       +PYW+ +NSWGP   ++G++++
Sbjct: 537 YRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRV 596

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+N CG+ ++A  A +
Sbjct: 597 YRGDNTCGVSEMATSAVL 614



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 168/316 (53%), Gaps = 27/316 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           F  F V+ GR+Y +  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 309 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADLTSSEYKE 368

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +TG  W +R   +       V          G +P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 369 RTGL-W-QRDEAKATGGSAAVVPAY-----HGELPKEFDWRQKNAVTPVKNQGSCGSCWA 421

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           FS+ G +EG YA+KTG+L EFS+ +L++C    S C+G   + + +      GLE E +Y
Sbjct: 422 FSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEY 481

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYN 886
           PYK    +K +C ++++   +          G+ET M++ L   GP+S+ +N++ +  Y 
Sbjct: 482 PYK---AKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLTKGPISIGINANAMQFYR 538

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIER 940
           G         CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G++++ R
Sbjct: 539 GGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYR 598

Query: 941 GNNACGIEQIAGYATI 956
           G+N CG+ ++A  A +
Sbjct: 599 GDNTCGVSEMATSAVL 614



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 132/225 (58%), Gaps = 11/225 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P  +DWR+KN   P  +Q  CGSCWAFS+ G +EG YA+KTG+L EFS+ +L++C  
Sbjct: 393 GELPKEFDWRQKNAVTPVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDT 452

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             S C+G   + + +      GLE E +YPYK    +K +C ++++   +          
Sbjct: 453 TDSACNGGLMDNAYKAIKDIGGLEYEAEYPYK---AKKNQCHFNRTLSHVQVAGFVDLPK 509

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 184
           G+ET M++ L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  D  
Sbjct: 510 GNETAMQEWLLTKGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYP 569

Query: 185 ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 570 NFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 614



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 6/66 (9%)

Query: 965  CSPYDLGHAVLLVGYGKQD------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G++++ RG+N CG+ ++
Sbjct: 549  CSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEM 608

Query: 1019 AGYATI 1024
            A  A +
Sbjct: 609  ATSAVL 614


>gi|350421176|ref|XP_003492760.1| PREDICTED: hypothetical protein LOC100745708 [Bombus impatiens]
          Length = 884

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 165/316 (52%), Gaps = 27/316 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           F+AFI K G+ Y + +E  +RF+ FKQ+     E          YG + F+D +P+E   
Sbjct: 579 FEAFIKKFGKTYNSADEKLDRFKIFKQNLKIIEELQTFERGTAEYGVTMFADLTPKEFKA 638

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
           +      E  +E         E  L E E  D  +P  +DWR  +V  P  DQ  CGSCW
Sbjct: 639 RYLGLRPELKHEN--------EIPLPEAEIPDVSLPLKFDWRDHSVVTPVKDQGQCGSCW 690

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKD 461
           AFS+ G +EGQYAIK  +L+  S+ +LV+C     GC G D            GLE E D
Sbjct: 691 AFSVTGNVEGQYAIKHNQLLSLSEQELVDCDSLDEGCNGGDMENAYKAIERLGGLELESD 750

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           YPY +   EK     +K+KV++ +  +    +  + M + L K GP+SVG+N++ + FY 
Sbjct: 751 YPY-DAKDEKCHFLQNKAKVQVVSAVNIT--SDEKRMAQWLVKNGPISVGINANAMQFYF 807

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGK------QDDIPYWLARNSWGPIGPDEGFFKIER 575
           G      +  C+P +L H VL+VGYG         ++PYW+ +NSWGP   + G++++ R
Sbjct: 808 GGVSHPLNFLCNPKNLDHGVLIVGYGISKYPLFHKELPYWIIKNSWGPRWGERGYYRVYR 867

Query: 576 GNNACGIEQIAGYATI 591
           G+  CG+  +A  A +
Sbjct: 868 GDGTCGVNTMATSAVV 883



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 168/316 (53%), Gaps = 28/316 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           F+AFI K G+ Y + +E  +RF+ FKQ+     E          YG + F+D +P+E   
Sbjct: 579 FEAFIKKFGKTYNSADEKLDRFKIFKQNLKIIEELQTFERGTAEYGVTMFADLTPKEFKA 638

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
           +      E  +E         E  L E E  D  +P  +DWR  +V  P  DQ  CGSCW
Sbjct: 639 RYLGLRPELKHEN--------EIPLPEAEIPDVSLPLKFDWRDHSVVTPVKDQGQCGSCW 690

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKD 826
           AFS+ G +EGQYAIK  +L+  S+ +LV+C     GC+G   E + +   +  GLE E D
Sbjct: 691 AFSVTGNVEGQYAIKHNQLLSLSEQELVDCDSLDEGCNGGDMENAYKAIERLGGLELESD 750

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 886
           YPY +A  EK     +K+KV++ +  +    +  + M + L K GP+SV +N++ +  Y 
Sbjct: 751 YPY-DAKDEKCHFLQNKAKVQVVSAVNIT--SDEKRMAQWLVKNGPISVGINANAMQFYF 807

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGK------QDNIPYWLVRNSWGPIGPDEGFFKIER 940
           G      +  C+P +L H VL+VGYG          +PYW+++NSWGP   + G++++ R
Sbjct: 808 GGVSHPLNFLCNPKNLDHGVLIVGYGISKYPLFHKELPYWIIKNSWGPRWGERGYYRVYR 867

Query: 941 GNNACGIEQIAGYATI 956
           G+  CG+  +A  A +
Sbjct: 868 GDGTCGVNTMATSAVV 883



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 129/225 (57%), Gaps = 10/225 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P  +DWR  +V  P  DQ  CGSCWAFS+ G +EGQYAIK  +L+  S+ +LV+C 
Sbjct: 662 DVSLPLKFDWRDHSVVTPVKDQGQCGSCWAFSVTGNVEGQYAIKHNQLLSLSEQELVDCD 721

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
               GC+G   E + +   +  GLE E DYPY +A  EK     +K+KV++ +  +    
Sbjct: 722 SLDEGCNGGDMENAYKAIERLGGLELESDYPY-DAKDEKCHFLQNKAKVQVVSAVNIT-- 778

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK---- 182
           +  + M + L K GP+SV +N++ +  Y G      +  C+P +L H VL+VGYG     
Sbjct: 779 SDEKRMAQWLVKNGPISVGINANAMQFYFGGVSHPLNFLCNPKNLDHGVLIVGYGISKYP 838

Query: 183 --QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +PYW+++NSWGP   + G++++ RG+  CG+  +A  A +
Sbjct: 839 LFHKELPYWIIKNSWGPRWGERGYYRVYRGDGTCGVNTMATSAVV 883


>gi|118429527|gb|ABK91811.1| cathepsin F precursor [Clonorchis sinensis]
          Length = 326

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/328 (36%), Positives = 164/328 (50%), Gaps = 31/328 (9%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     GCDG +  P 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDYLDGGCDGGY--PP 183

Query: 813 IEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILY 868
             YT      GLE   DYPY    G    C  DKSK V    G   L  +     +K L 
Sbjct: 184 QTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSEKVQAQK-LR 239

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
             GPLS  LN+D +  Y G  +R     C P  + HAVL VGYG Q+  PYW+V+NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATI 956
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/328 (35%), Positives = 160/328 (48%), Gaps = 30/328 (9%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C       GGCDG   
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDYL---DGGCDGGYP 182

Query: 447 PIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
           P  YT      GLE   DYPY    G    C  DKSK   +     +     +   + L 
Sbjct: 183 PQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSEKVQAQKLR 239

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GPLS  LN+  +  Y G  +R     C P  + HAVL VGYG Q+  PYW+ +NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/217 (43%), Positives = 117/217 (53%), Gaps = 12/217 (5%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDYLDGG 176

Query: 73  CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNG 128
           CDG +  P   YT      GLE   DYPY    G    C  DKSK V    G   L  + 
Sbjct: 177 CDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSE 231

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
               +K L   GPLS  LN+D +  Y G  +R     C P  + HAVL VGYG Q+  PY
Sbjct: 232 KVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPY 288

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 289 WIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + HAVL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 266  CDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325


>gi|401758208|gb|AFQ01139.1| cathepsin F-like protease, partial [Chilo suppressalis]
          Length = 537

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 169/323 (52%), Gaps = 35/323 (10%)

Query: 290 ETFKAFIVKRGRQYANDE-EIKERFEYFKQDGHKKHER---------YGTSEFSDRSPEE 339
           + F  FI     +Y ND  E+ +RFE FK++  K HE          Y  + F+D + EE
Sbjct: 229 QLFFNFITTYKPEYINDHVEMTKRFEIFKENVKKIHELNTHERGTGVYAVTRFTDLTYEE 288

Query: 340 ILCKTGFKWSERTYERIVADREKVEKMLM---EVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
              K         Y  +  + +K  ++ M   E+ K   +P ++DWR         DQ A
Sbjct: 289 FKSK---------YLGLNPNLKKPNQIPMRQAEIPKVHQLPASFDWRPLGAVTEVKDQGA 339

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQA 454
           CGSCWAFS+ G +EGQ+ +KTGKL+  S+ +LV+C K   GC G   D   + IE     
Sbjct: 340 CGSCWAFSVTGNIEGQWKLKTGKLLSLSEQELVDCDKMDDGCDGGYMDNAYRAIE--QLG 397

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GLE+E++YPY     E  KC+++KS  K+         +    M K L   GP+S+G+N+
Sbjct: 398 GLETEEEYPYE---AEDDKCSFNKSLSKVQISGAVNISSNETNMAKWLVHNGPISIGINA 454

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDE 568
           + + FY G         C+P ++ H VL+VGYG ++       +PYW+ +NSWGP   ++
Sbjct: 455 NAMQFYVGGVSHPWKALCNPKNIDHGVLIVGYGIKEYPLFNKQLPYWVVKNSWGPGWGEQ 514

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G++++ RG+  CG+  +A  A +
Sbjct: 515 GYYRVFRGDGTCGVNTMASSAVV 537



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 170/321 (52%), Gaps = 32/321 (9%)

Query: 656 ETFKAFIVKRGRQYANDE-EIKERFEYFKQDGHKKHER---------YGTSEFSDRSPEE 705
           + F  FI     +Y ND  E+ +RFE FK++  K HE          Y  + F+D + EE
Sbjct: 229 QLFFNFITTYKPEYINDHVEMTKRFEIFKENVKKIHELNTHERGTGVYAVTRFTDLTYEE 288

Query: 706 ILCKTGFKWSERTYERIVADREKVEKMLM---EVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
              K         Y  +  + +K  ++ M   E+ K   +P ++DWR         DQ A
Sbjct: 289 FKSK---------YLGLNPNLKKPNQIPMRQAEIPKVHQLPASFDWRPLGAVTEVKDQGA 339

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGL 821
           CGSCWAFS+ G +EGQ+ +KTGKL+  S+ +LV+C K   GCDG + + +     Q  GL
Sbjct: 340 CGSCWAFSVTGNIEGQWKLKTGKLLSLSEQELVDCDKMDDGCDGGYMDNAYRAIEQLGGL 399

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E++YPY+    E  KC+++KS  K+         +    M K L   GP+S+ +N++ 
Sbjct: 400 ETEEEYPYE---AEDDKCSFNKSLSKVQISGAVNISSNETNMAKWLVHNGPISIGINANA 456

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGF 935
           +  Y G         C+P ++ H VL+VGYG ++       +PYW+V+NSWGP   ++G+
Sbjct: 457 MQFYVGGVSHPWKALCNPKNIDHGVLIVGYGIKEYPLFNKQLPYWVVKNSWGPGWGEQGY 516

Query: 936 FKIERGNNACGIEQIAGYATI 956
           +++ RG+  CG+  +A  A +
Sbjct: 517 YRVFRGDGTCGVNTMASSAVV 537



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 131/229 (57%), Gaps = 10/229 (4%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           E+ K   +P ++DWR         DQ  CGSCWAFS+ G +EGQ+ +KTGKL+  S+ +L
Sbjct: 312 EIPKVHQLPASFDWRPLGAVTEVKDQGACGSCWAFSVTGNIEGQWKLKTGKLLSLSEQEL 371

Query: 64  VECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           V+C K   GCDG + + +     Q  GLE+E++YPY+    E  KC+++KS  K+     
Sbjct: 372 VDCDKMDDGCDGGYMDNAYRAIEQLGGLETEEEYPYE---AEDDKCSFNKSLSKVQISGA 428

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
               +    M K L   GP+S+ +N++ +  Y G         C+P ++ H VL+VGYG 
Sbjct: 429 VNISSNETNMAKWLVHNGPISIGINANAMQFYVGGVSHPWKALCNPKNIDHGVLIVGYGI 488

Query: 183 QD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           ++       +PYW+V+NSWGP   ++G++++ RG+  CG+  +A  A +
Sbjct: 489 KEYPLFNKQLPYWVVKNSWGPGWGEQGYYRVFRGDGTCGVNTMASSAVV 537


>gi|195395906|ref|XP_002056575.1| GJ11017 [Drosophila virilis]
 gi|194143284|gb|EDW59687.1| GJ11017 [Drosophila virilis]
          Length = 599

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 166/318 (52%), Gaps = 30/318 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           F  F VK  R+YAN  E + R   F+Q      E         +YG +EF+D +  E   
Sbjct: 293 FHKFQVKYKRRYANSAEHQMRLRIFRQSLKTIQELNANEQGSAKYGITEFADMTSTEYAQ 352

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           + G  W +R+  +       V          G +P  +DWR+KN      +Q  CGSCWA
Sbjct: 353 RAGL-W-QRSEGKPTGGAAAVVPAYA-----GELPKEFDWRQKNAVTHVKNQGQCGSCWA 405

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS+ G +EG YAIKTG L EFS+ +L++C  + S C G   D   + I+     GLE E 
Sbjct: 406 FSVTGNIEGAYAIKTGDLQEFSEQELLDCDSKDSACNGGLMDNAYKAIKDI--GGLEYES 463

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHF 519
           +YPY    G+K +C ++++   +          G+ET M++ L   GP+S+G+N++ + F
Sbjct: 464 EYPYE---GKKKQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTNGPISIGINANAMQF 520

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKI 573
           Y G         CS  +L H VL+VGYG  D       +PYW+ +NSWGP   ++G++++
Sbjct: 521 YRGGVSHPWSPLCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRV 580

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+N CG+ ++A  A +
Sbjct: 581 YRGDNTCGVSEMATSALL 598



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 166/316 (52%), Gaps = 27/316 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           F  F VK  R+YAN  E + R   F+Q      E         +YG +EF+D +  E   
Sbjct: 293 FHKFQVKYKRRYANSAEHQMRLRIFRQSLKTIQELNANEQGSAKYGITEFADMTSTEYAQ 352

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           + G  W +R+  +       V          G +P  +DWR+KN      +Q  CGSCWA
Sbjct: 353 RAGL-W-QRSEGKPTGGAAAVVPAYA-----GELPKEFDWRQKNAVTHVKNQGQCGSCWA 405

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           FS+ G +EG YAIKTG L EFS+ +L++C  + S C+G   + + +      GLE E +Y
Sbjct: 406 FSVTGNIEGAYAIKTGDLQEFSEQELLDCDSKDSACNGGLMDNAYKAIKDIGGLEYESEY 465

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYN 886
           PY+   G+K +C ++++   +          G+ET M++ L   GP+S+ +N++ +  Y 
Sbjct: 466 PYE---GKKKQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTNGPISIGINANAMQFYR 522

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIER 940
           G         CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G++++ R
Sbjct: 523 GGVSHPWSPLCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYR 582

Query: 941 GNNACGIEQIAGYATI 956
           G+N CG+ ++A  A +
Sbjct: 583 GDNTCGVSEMATSALL 598



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 132/225 (58%), Gaps = 11/225 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P  +DWR+KN      +Q  CGSCWAFS+ G +EG YAIKTG L EFS+ +L++C  
Sbjct: 377 GELPKEFDWRQKNAVTHVKNQGQCGSCWAFSVTGNIEGAYAIKTGDLQEFSEQELLDCDS 436

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           + S C+G   + + +      GLE E +YPY+   G+K +C ++++   +          
Sbjct: 437 KDSACNGGLMDNAYKAIKDIGGLEYESEYPYE---GKKKQCHFNRTLSHVQVSGFVDLPK 493

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 184
           G+ET M++ L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  D  
Sbjct: 494 GNETAMQEWLLTNGPISIGINANAMQFYRGGVSHPWSPLCSKKNLDHGVLIVGYGVSDYP 553

Query: 185 ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 554 NFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSALL 598


>gi|417401303|gb|JAA47542.1| Putative cathepsin f [Desmodus rotundus]
          Length = 459

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 154/315 (48%), Gaps = 23/315 (7%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           ++  FK FI    R Y  +EE + R   F  +  +  E         +YG ++FSD + E
Sbjct: 158 MVSLFKHFIATYNRTYETEEEAQWRMSIFINNMVRAQEIQALDRGTAQYGVTKFSDLTEE 217

Query: 339 EILCKTGFKWSERTYERIVADREKV-EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E           RT+      +E + +KM +    D P P  WDWR K       +Q  C
Sbjct: 218 EF----------RTFYLNPLLKEGLGKKMRLAKPVDDPAPPEWDWRNKGAVTKVKNQGMC 267

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLE 457
           GSCWAFS+ G +EGQ+ +K G L+  S+ +LV+C      C G              GLE
Sbjct: 268 GSCWAFSVTGNVEGQWFLKQGDLLSLSEQELVDCDTLDKACMGGLPSNAYSAIKTLGGLE 327

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
           +E DY Y   +G    C++   KVK++           + +   L K GP+S+ +N+  +
Sbjct: 328 TEDDYSY---HGHLQTCSFTAEKVKVYINDSVELSKDEQKLAAWLAKKGPISIAINAFGM 384

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY     R     CSP+ + HAVLLVGYG + D+P+W  +NSWG    +EG++ + RG+
Sbjct: 385 QFYRRGISRPLRLLCSPWFIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEEGYYYLHRGS 444

Query: 578 NACGIEQIAGYATID 592
            ACG+  +A  A +D
Sbjct: 445 RACGVNVMASSAVVD 459



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 158/317 (49%), Gaps = 28/317 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           ++  FK FI    R Y  +EE + R   F  +  +  E         +YG ++FSD + E
Sbjct: 158 MVSLFKHFIATYNRTYETEEEAQWRMSIFINNMVRAQEIQALDRGTAQYGVTKFSDLTEE 217

Query: 705 EILCKTGFKWSERTYERIVADREKV-EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E           RT+      +E + +KM +    D P P  WDWR K       +Q  C
Sbjct: 218 EF----------RTFYLNPLLKEGLGKKMRLAKPVDDPAPPEWDWRNKGAVTKVKNQGMC 267

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAG 820
           GSCWAFS+ G +EGQ+ +K G L+  S+ +LV+C      C G    PS  Y+      G
Sbjct: 268 GSCWAFSVTGNVEGQWFLKQGDLLSLSEQELVDCDTLDKACMGGL--PSNAYSAIKTLGG 325

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           LE+E DY Y   +G    C++   KVK++           + +   L K GP+S+ +N+ 
Sbjct: 326 LETEDDYSY---HGHLQTCSFTAEKVKVYINDSVELSKDEQKLAAWLAKKGPISIAINAF 382

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +  Y     R     CSP+ + HAVLLVGYG + ++P+W ++NSWG    +EG++ + R
Sbjct: 383 GMQFYRRGISRPLRLLCSPWFIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEEGYYYLHR 442

Query: 941 GNNACGIEQIAGYATID 957
           G+ ACG+  +A  A +D
Sbjct: 443 GSRACGVNVMASSAVVD 459



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 120/222 (54%), Gaps = 8/222 (3%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D P P  WDWR K       +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +LV+C 
Sbjct: 243 DDPAPPEWDWRNKGAVTKVKNQGMCGSCWAFSVTGNVEGQWFLKQGDLLSLSEQELVDCD 302

Query: 68  KQCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
                C G    PS  Y+      GLE+E DY Y   +G    C++   KVK++      
Sbjct: 303 TLDKACMGGL--PSNAYSAIKTLGGLETEDDYSY---HGHLQTCSFTAEKVKVYINDSVE 357

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
                + +   L K GP+S+ +N+  +  Y     R     CSP+ + HAVLLVGYG + 
Sbjct: 358 LSKDEQKLAAWLAKKGPISIAINAFGMQFYRRGISRPLRLLCSPWFIDHAVLLVGYGNRS 417

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           ++P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +D
Sbjct: 418 DVPFWAIKNSWGTDWGEEGYYYLHRGSRACGVNVMASSAVVD 459



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 399  CSPWFIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEEGYYYLHRGSRACGVNVMASSAVV 458

Query: 1025 D 1025
            D
Sbjct: 459  D 459


>gi|395544492|ref|XP_003774144.1| PREDICTED: cathepsin F [Sarcophilus harrisii]
          Length = 451

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 150/318 (47%), Gaps = 21/318 (6%)

Query: 284 DNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSD 334
           D+  ++  FK F+    + YAN  E + R   F          Q+  +    YG ++FSD
Sbjct: 146 DSVQLISLFKDFLTTYNKSYANATETQRRLGIFARNLELARKVQELDRGSAEYGVTKFSD 205

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE            +Y   +        +       GP P +WDWR         +Q
Sbjct: 206 LTEEEF---------RTSYLNPLLSSLPGRALRPGPATRGPAPASWDWRDHGAVTGVKNQ 256

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQA 454
            ACGSCWAFS+ G +EGQ+ ++ G L+  S+ +LV+C      CGG              
Sbjct: 257 GACGSCWAFSVTGNVEGQWFLRRGALLALSEQELVDCDTLDQACGGGLPSNAYTAIEKLG 316

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GLE+EKDY Y    G K +C++   K +++           E +   L + GP+S+ LN+
Sbjct: 317 GLETEKDYSY---EGRKERCSFSPDKARVYINSSVDLSRDEEELATWLAENGPVSIALNA 373

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
             + FY           CSP+ + HAVLLVGYG +  IP+W  +NSWGP   +EG++ + 
Sbjct: 374 FAMQFYRRGVSHPFRPLCSPWFIDHAVLLVGYGHRSGIPFWAIKNSWGPDWGEEGYYYLY 433

Query: 575 RGNNACGIEQIAGYATID 592
           RG  ACG+  +A  A +D
Sbjct: 434 RGARACGVNAMASSAIVD 451



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 154/320 (48%), Gaps = 26/320 (8%)

Query: 650 DNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSD 700
           D+  ++  FK F+    + YAN  E + R   F          Q+  +    YG ++FSD
Sbjct: 146 DSVQLISLFKDFLTTYNKSYANATETQRRLGIFARNLELARKVQELDRGSAEYGVTKFSD 205

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE            +Y   +        +       GP P +WDWR         +Q
Sbjct: 206 LTEEEF---------RTSYLNPLLSSLPGRALRPGPATRGPAPASWDWRDHGAVTGVKNQ 256

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---H 817
            ACGSCWAFS+ G +EGQ+ ++ G L+  S+ +LV+C      C G    PS  YT    
Sbjct: 257 GACGSCWAFSVTGNVEGQWFLRRGALLALSEQELVDCDTLDQACGGGL--PSNAYTAIEK 314

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             GLE+EKDY Y+   G K +C++   K +++           E +   L + GP+S+ L
Sbjct: 315 LGGLETEKDYSYE---GRKERCSFSPDKARVYINSSVDLSRDEEELATWLAENGPVSIAL 371

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           N+  +  Y           CSP+ + HAVLLVGYG +  IP+W ++NSWGP   +EG++ 
Sbjct: 372 NAFAMQFYRRGVSHPFRPLCSPWFIDHAVLLVGYGHRSGIPFWAIKNSWGPDWGEEGYYY 431

Query: 938 IERGNNACGIEQIAGYATID 957
           + RG  ACG+  +A  A +D
Sbjct: 432 LYRGARACGVNAMASSAIVD 451



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 120/221 (54%), Gaps = 8/221 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           GP P +WDWR         +Q  CGSCWAFS+ G +EGQ+ ++ G L+  S+ +LV+C  
Sbjct: 236 GPAPASWDWRDHGAVTGVKNQGACGSCWAFSVTGNVEGQWFLRRGALLALSEQELVDCDT 295

Query: 69  QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
               C G    PS  YT      GLE+EKDY Y+   G K +C++   K +++       
Sbjct: 296 LDQACGGGL--PSNAYTAIEKLGGLETEKDYSYE---GRKERCSFSPDKARVYINSSVDL 350

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +   L + GP+S+ LN+  +  Y           CSP+ + HAVLLVGYG +  
Sbjct: 351 SRDEEELATWLAENGPVSIALNAFAMQFYRRGVSHPFRPLCSPWFIDHAVLLVGYGHRSG 410

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           IP+W ++NSWGP   +EG++ + RG  ACG+  +A  A +D
Sbjct: 411 IPFWAIKNSWGPDWGEEGYYYLYRGARACGVNAMASSAIVD 451



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +  IP+W ++NSWGP   +EG++ + RG  ACG+  +A  A +
Sbjct: 391  CSPWFIDHAVLLVGYGHRSGIPFWAIKNSWGPDWGEEGYYYLYRGARACGVNAMASSAIV 450

Query: 1025 D 1025
            D
Sbjct: 451  D 451


>gi|71993922|ref|NP_505215.2| Protein TAG-196 [Caenorhabditis elegans]
 gi|351050011|emb|CCD64084.1| Protein TAG-196 [Caenorhabditis elegans]
          Length = 477

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 163/315 (51%), Gaps = 17/315 (5%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 338
           I  +F  F+ +  ++Y N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 170 IWNSFLDFVDRHEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTKFSDMTTM 229

Query: 339 EIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E       ++W +  Y    A+ EK +  + E +    +P+++DWR+K       +Q  C
Sbjct: 230 EFKKIMLPYQWEQPVYPMEQANFEKHDVTINEED----LPESFDWREKGAVTQVKNQGNC 285

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLE 457
           GSCWAFS  G +EG + I   KLV  S+ +LV+C     GC G        E     GLE
Sbjct: 286 GSCWAFSTTGNVEGAWFIAKNKLVSLSEQELVDCDSMDQGCNGGLPSNAYKEIIRMGGLE 345

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
            E  YPY +G GE   C   +  + ++        +    M+K L   GP+S+GLN++ +
Sbjct: 346 PEDAYPY-DGRGET--CHLVRKDIAVYINGSVELPHDEVEMQKWLVTKGPISIGLNANTL 402

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY    +      C P+ L H VL+VGYGK    PYW+ +NSWGP   + G+FK+ RG 
Sbjct: 403 QFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPNWGEAGYFKLYRGK 462

Query: 578 NACGIEQIAGYATID 592
           N CG++++A  A ++
Sbjct: 463 NVCGVQEMATSALVN 477



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 163/317 (51%), Gaps = 22/317 (6%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 704
           I  +F  F+ +  ++Y N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 170 IWNSFLDFVDRHEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTKFSDMTTM 229

Query: 705 EIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E       ++W +  Y    A+ EK +  + E +    +P+++DWR+K       +Q  C
Sbjct: 230 EFKKIMLPYQWEQPVYPMEQANFEKHDVTINEED----LPESFDWREKGAVTQVKNQGNC 285

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EG + I   KLV  S+ +LV+C     GC+G    PS  Y       G
Sbjct: 286 GSCWAFSTTGNVEGAWFIAKNKLVSLSEQELVDCDSMDQGCNGGL--PSNAYKEIIRMGG 343

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           LE E  YPY   +G    C   +  + ++        +    M+K L   GP+S+ LN++
Sbjct: 344 LEPEDAYPY---DGRGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVTKGPISIGLNAN 400

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +  Y    +      C P+ L H VL+VGYGK    PYW+V+NSWGP   + G+FK+ R
Sbjct: 401 TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPNWGEAGYFKLYR 460

Query: 941 GNNACGIEQIAGYATID 957
           G N CG++++A  A ++
Sbjct: 461 GKNVCGVQEMATSALVN 477



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 118/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+++DWR+K       +Q +CGSCWAFS  G +EG + I   KLV  S+ +LV+C    
Sbjct: 264 LPESFDWREKGAVTQVKNQGNCGSCWAFSTTGNVEGAWFIAKNKLVSLSEQELVDCDSMD 323

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC+G    PS  Y       GLE E  YPY   +G    C   +  + ++        +
Sbjct: 324 QGCNGGL--PSNAYKEIIRMGGLEPEDAYPY---DGRGETCHLVRKDIAVYINGSVELPH 378

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               M+K L   GP+S+ LN++ +  Y    +      C P+ L H VL+VGYGK    P
Sbjct: 379 DEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKP 438

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW+V+NSWGP   + G+FK+ RG N CG++++A  A ++
Sbjct: 439 YWIVKNSWGPNWGEAGYFKLYRGKNVCGVQEMATSALVN 477



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P+ L H VL+VGYGK    PYW+V+NSWGP   + G+FK+ RG N CG++++A  A +
Sbjct: 417  CEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPNWGEAGYFKLYRGKNVCGVQEMATSALV 476

Query: 1025 D 1025
            +
Sbjct: 477  N 477


>gi|126338866|ref|XP_001379280.1| PREDICTED: cathepsin F-like [Monodelphis domestica]
          Length = 567

 Score =  181 bits (458), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 160/348 (45%), Gaps = 25/348 (7%)

Query: 258 PSLTDRITDQVVARVDTLAIEGSLTF----DNENILETFKAFIVKRGRQYANDEEIKERF 313
           P L  +  +Q       LA   S +     D+  ++  FK F+    + YAN  E + R 
Sbjct: 232 PGLPSKARNQSSPDAGLLAEPHSSSLPRMGDSVELISLFKDFLTTYNKSYANATETQRRL 291

Query: 314 EYFKQD---GHKKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE 364
             F ++    HK  E      +YG ++FSD + EE             Y   +       
Sbjct: 292 GIFARNLELAHKLQELDQGSAQYGVTKFSDLTEEEF---------RMFYLNPLLSSLPGR 342

Query: 365 KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFS 424
            +       GP P +WDWR       A +Q  CGSCWAFS+ G +EGQ+ ++ G L+  S
Sbjct: 343 ALRPAPRARGPAPASWDWRDHGALTAAKNQGMCGSCWAFSVTGNVEGQWFLRRGALLTLS 402

Query: 425 KSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF 484
           + +LV+C      CGG              GLE+EKDY Y    G K +C++   K + +
Sbjct: 403 EQELVDCDTLDQACGGGLPSNAYTAIETLGGLETEKDYSY---EGRKERCSFSPDKARAY 459

Query: 485 TGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLV 544
                      + +   L + GP+S+ LN+  + FY           CSP+ + HAVLLV
Sbjct: 460 INSSVDLSRDEQEIAAWLAENGPVSIALNAFAMQFYRRGVSHPFRPLCSPWFIDHAVLLV 519

Query: 545 GYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           GYG +  IP+W  +NSWGP   +EG++ + RG  ACG+  +A  A +D
Sbjct: 520 GYGDRSGIPFWAIKNSWGPDWGEEGYYYLYRGARACGMNTMASSAIVD 567



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 30/350 (8%)

Query: 624 PSLTDRITDQVVARVDTLAIEGSLTF----DNENILETFKAFIVKRGRQYANDEEIKERF 679
           P L  +  +Q       LA   S +     D+  ++  FK F+    + YAN  E + R 
Sbjct: 232 PGLPSKARNQSSPDAGLLAEPHSSSLPRMGDSVELISLFKDFLTTYNKSYANATETQRRL 291

Query: 680 EYFKQD---GHKKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE 730
             F ++    HK  E      +YG ++FSD + EE             Y   +       
Sbjct: 292 GIFARNLELAHKLQELDQGSAQYGVTKFSDLTEEEF---------RMFYLNPLLSSLPGR 342

Query: 731 KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFS 790
            +       GP P +WDWR       A +Q  CGSCWAFS+ G +EGQ+ ++ G L+  S
Sbjct: 343 ALRPAPRARGPAPASWDWRDHGALTAAKNQGMCGSCWAFSVTGNVEGQWFLRRGALLTLS 402

Query: 791 KSQLVECAKQCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVK 847
           + +LV+C      C G    PS  YT      GLE+EKDY Y+   G K +C++   K +
Sbjct: 403 EQELVDCDTLDQACGGGL--PSNAYTAIETLGGLETEKDYSYE---GRKERCSFSPDKAR 457

Query: 848 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 907
            +           + +   L + GP+S+ LN+  +  Y           CSP+ + HAVL
Sbjct: 458 AYINSSVDLSRDEQEIAAWLAENGPVSIALNAFAMQFYRRGVSHPFRPLCSPWFIDHAVL 517

Query: 908 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           LVGYG +  IP+W ++NSWGP   +EG++ + RG  ACG+  +A  A +D
Sbjct: 518 LVGYGDRSGIPFWAIKNSWGPDWGEEGYYYLYRGARACGMNTMASSAIVD 567



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 120/221 (54%), Gaps = 8/221 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           GP P +WDWR       A +Q  CGSCWAFS+ G +EGQ+ ++ G L+  S+ +LV+C  
Sbjct: 352 GPAPASWDWRDHGALTAAKNQGMCGSCWAFSVTGNVEGQWFLRRGALLTLSEQELVDCDT 411

Query: 69  QCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
               C G    PS  YT      GLE+EKDY Y+   G K +C++   K + +       
Sbjct: 412 LDQACGGGL--PSNAYTAIETLGGLETEKDYSYE---GRKERCSFSPDKARAYINSSVDL 466

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GP+S+ LN+  +  Y           CSP+ + HAVLLVGYG +  
Sbjct: 467 SRDEQEIAAWLAENGPVSIALNAFAMQFYRRGVSHPFRPLCSPWFIDHAVLLVGYGDRSG 526

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           IP+W ++NSWGP   +EG++ + RG  ACG+  +A  A +D
Sbjct: 527 IPFWAIKNSWGPDWGEEGYYYLYRGARACGMNTMASSAIVD 567



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +  IP+W ++NSWGP   +EG++ + RG  ACG+  +A  A +
Sbjct: 507  CSPWFIDHAVLLVGYGDRSGIPFWAIKNSWGPDWGEEGYYYLYRGARACGMNTMASSAIV 566

Query: 1025 D 1025
            D
Sbjct: 567  D 567


>gi|118429515|gb|ABK91805.1| cysteine proteinase 7 precursor [Clonorchis sinensis]
          Length = 326

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/328 (36%), Positives = 165/328 (50%), Gaps = 31/328 (9%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     GCDG +  P 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDYLDGGCDGGY--PP 183

Query: 813 IEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILY 868
             YT      GLE   DYPY    G    C  DKSK V    G   L  +     +K L 
Sbjct: 184 QTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSEKVQAQK-LR 239

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
             GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+V+NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATI 956
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/328 (35%), Positives = 161/328 (49%), Gaps = 30/328 (9%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C       GGCDG   
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDYL---DGGCDGGYP 182

Query: 447 PIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
           P  YT      GLE   DYPY    G    C  DKSK   +     +     +   + L 
Sbjct: 183 PQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSEKVQAQKLR 239

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GPLS  LN+  +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+ +NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/217 (43%), Positives = 118/217 (54%), Gaps = 12/217 (5%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDYLDGG 176

Query: 73  CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNG 128
           CDG +  P   YT      GLE   DYPY    G    C  DKSK V    G   L  + 
Sbjct: 177 CDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSE 231

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
               +K L   GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PY
Sbjct: 232 KVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPY 288

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 289 WIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325


>gi|307175778|gb|EFN65613.1| Putative cysteine proteinase CG12163 [Camponotus floridanus]
          Length = 887

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/321 (34%), Positives = 162/321 (50%), Gaps = 33/321 (10%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDG-----HKKHER----YGTSEFSDRSPEEI 340
           + F  F+V   R Y+  EE   R   F+++       +K ER    Y  + F+D SPEE 
Sbjct: 580 QLFNNFVVTYNRTYSTPEERNLRLRIFRENLGIIQLLRKTERGTAHYDVNMFADMSPEEF 639

Query: 341 LCK-TGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACG 398
             +  G +   R+   I          L E E  D  +P  +DWR+K+V  P  DQ  CG
Sbjct: 640 RSRYLGLRPDLRSENDIP---------LREAEIPDVELPPKFDWREKSVVTPVKDQGMCG 690

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGL 456
           SCWAFS+ G +EGQYAIK G+L+  S+ +LV+C     GC G   D   + IE     GL
Sbjct: 691 SCWAFSVTGNIEGQYAIKHGRLLSLSEQELVDCDDLDEGCNGGLPDNAYRAIEKL--GGL 748

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL 516
           E E DYPY     E  KC + K+  K+         +    M + L + GP+S+G+N++ 
Sbjct: 749 ELESDYPYE---AENEKCHFKKNLAKVQLASAVNITSNETQMAQWLVQNGPISIGINANA 805

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGF 570
           + FY G         C+P +L H VL+VGYG  D       +PYW  +NSWG    ++G+
Sbjct: 806 MQFYVGGVSHPFKFLCNPKNLDHGVLIVGYGTSDYPLFHKKLPYWTIKNSWGKRWGEQGY 865

Query: 571 FKIERGNNACGIEQIAGYATI 591
           +++ RG+  CG+  +A  A +
Sbjct: 866 YRVYRGDGTCGLNTLATSAVV 886



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 169/322 (52%), Gaps = 36/322 (11%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDG-----HKKHER----YGTSEFSDRSPEEI 706
           + F  F+V   R Y+  EE   R   F+++       +K ER    Y  + F+D SPEE 
Sbjct: 580 QLFNNFVVTYNRTYSTPEERNLRLRIFRENLGIIQLLRKTERGTAHYDVNMFADMSPEEF 639

Query: 707 LCK-TGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACG 764
             +  G +   R+   I          L E E  D  +P  +DWR+K+V  P  DQ  CG
Sbjct: 640 RSRYLGLRPDLRSENDIP---------LREAEIPDVELPPKFDWREKSVVTPVKDQGMCG 690

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLES 823
           SCWAFS+ G +EGQYAIK G+L+  S+ +LV+C     GC+G   + +     +  GLE 
Sbjct: 691 SCWAFSVTGNIEGQYAIKHGRLLSLSEQELVDCDDLDEGCNGGLPDNAYRAIEKLGGLEL 750

Query: 824 EKDYPYKNANGEKFKCAYDK--SKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSD 880
           E DYPY+    E  KC + K  +KV+L +    ++   +ET M + L + GP+S+ +N++
Sbjct: 751 ESDYPYE---AENEKCHFKKNLAKVQLASA---VNITSNETQMAQWLVQNGPISIGINAN 804

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEG 934
            +  Y G         C+P +L H VL+VGYG  D       +PYW ++NSWG    ++G
Sbjct: 805 AMQFYVGGVSHPFKFLCNPKNLDHGVLIVGYGTSDYPLFHKKLPYWTIKNSWGKRWGEQG 864

Query: 935 FFKIERGNNACGIEQIAGYATI 956
           ++++ RG+  CG+  +A  A +
Sbjct: 865 YYRVYRGDGTCGLNTLATSAVV 886



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 132/228 (57%), Gaps = 16/228 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P  +DWR+K+V  P  DQ  CGSCWAFS+ G +EGQYAIK G+L+  S+ +LV+C 
Sbjct: 665 DVELPPKFDWREKSVVTPVKDQGMCGSCWAFSVTGNIEGQYAIKHGRLLSLSEQELVDCD 724

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDK--SKVKLFTGKDFL 124
               GC+G   + +     +  GLE E DYPY+    E  KC + K  +KV+L +    +
Sbjct: 725 DLDEGCNGGLPDNAYRAIEKLGGLELESDYPYE---AENEKCHFKKNLAKVQLASA---V 778

Query: 125 HFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +   +ET M + L + GP+S+ +N++ +  Y G         C+P +L H VL+VGYG  
Sbjct: 779 NITSNETQMAQWLVQNGPISIGINANAMQFYVGGVSHPFKFLCNPKNLDHGVLIVGYGTS 838

Query: 184 D------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           D       +PYW ++NSWG    ++G++++ RG+  CG+  +A  A +
Sbjct: 839 DYPLFHKKLPYWTIKNSWGKRWGEQGYYRVYRGDGTCGLNTLATSAVV 886


>gi|308506829|ref|XP_003115597.1| CRE-TAG-196 protein [Caenorhabditis remanei]
 gi|308256132|gb|EFP00085.1| CRE-TAG-196 protein [Caenorhabditis remanei]
          Length = 475

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 338
           I  +F  FI +  ++Y+N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 168 IWNSFLDFIDRHEKRYSNKREVLKRFRTFKKNAKAIRELQKNEQGTAVYGFTKFSDMTTM 227

Query: 339 EI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E       ++W +  Y    AD EK    + E +    +P+++DWR K       +Q  C
Sbjct: 228 EFKQTMLPYQWEQPVYPMDQADFEKEGITISEED----LPESFDWRDKGAVTQVKNQGNC 283

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLE 457
           GSCWAFS  G +EG + +   KLV  S+ +LV+C     GC G        E     GLE
Sbjct: 284 GSCWAFSTTGNVEGAWFLAKNKLVSLSEQELVDCDGVDQGCNGGLPSNAYKEIIRMGGLE 343

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
            E  YPY +G GE   C   +  + ++        +    M+K L   GP+S+GLN++ +
Sbjct: 344 PEDAYPY-DGKGET--CHLVRKDIAVYINGSIELPHDEVEMQKWLVTKGPISIGLNANTL 400

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY    +      C P+ L H VL+VGYGK    PYW+ +NSWGP   + G+FK+ RG 
Sbjct: 401 QFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGESGYFKLYRGK 460

Query: 578 NACGIEQIAGYATID 592
           N CG++++A  A ++
Sbjct: 461 NVCGVQEMATSALVN 475



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 163/317 (51%), Gaps = 22/317 (6%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 704
           I  +F  FI +  ++Y+N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 168 IWNSFLDFIDRHEKRYSNKREVLKRFRTFKKNAKAIRELQKNEQGTAVYGFTKFSDMTTM 227

Query: 705 EI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E       ++W +  Y    AD EK    + E +    +P+++DWR K       +Q  C
Sbjct: 228 EFKQTMLPYQWEQPVYPMDQADFEKEGITISEED----LPESFDWRDKGAVTQVKNQGNC 283

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EG + +   KLV  S+ +LV+C     GC+G    PS  Y       G
Sbjct: 284 GSCWAFSTTGNVEGAWFLAKNKLVSLSEQELVDCDGVDQGCNGGL--PSNAYKEIIRMGG 341

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           LE E  YPY   +G+   C   +  + ++        +    M+K L   GP+S+ LN++
Sbjct: 342 LEPEDAYPY---DGKGETCHLVRKDIAVYINGSIELPHDEVEMQKWLVTKGPISIGLNAN 398

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +  Y    +      C P+ L H VL+VGYGK    PYW+V+NSWGP   + G+FK+ R
Sbjct: 399 TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGESGYFKLYR 458

Query: 941 GNNACGIEQIAGYATID 957
           G N CG++++A  A ++
Sbjct: 459 GKNVCGVQEMATSALVN 475



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 118/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+++DWR K       +Q +CGSCWAFS  G +EG + +   KLV  S+ +LV+C    
Sbjct: 262 LPESFDWRDKGAVTQVKNQGNCGSCWAFSTTGNVEGAWFLAKNKLVSLSEQELVDCDGVD 321

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC+G    PS  Y       GLE E  YPY   +G+   C   +  + ++        +
Sbjct: 322 QGCNGGL--PSNAYKEIIRMGGLEPEDAYPY---DGKGETCHLVRKDIAVYINGSIELPH 376

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               M+K L   GP+S+ LN++ +  Y    +      C P+ L H VL+VGYGK    P
Sbjct: 377 DEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKP 436

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW+V+NSWGP   + G+FK+ RG N CG++++A  A ++
Sbjct: 437 YWIVKNSWGPTWGESGYFKLYRGKNVCGVQEMATSALVN 475



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P+ L H VL+VGYGK    PYW+V+NSWGP   + G+FK+ RG N CG++++A  A +
Sbjct: 415  CEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGESGYFKLYRGKNVCGVQEMATSALV 474

Query: 1025 D 1025
            +
Sbjct: 475  N 475


>gi|5231178|gb|AAD41105.1|AF157961_1 cysteine proteinase [Hypera postica]
          Length = 324

 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 170/331 (51%), Gaps = 32/331 (9%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GH-------K 688
           +AI  S++   E +   F+AF ++ G+ Y N  E  +RF  F  +      H       K
Sbjct: 12  VAISASIS---EELGAKFQAFKLEHGKTYLNQAEESKRFNIFTDNVRAIEAHNALYEQGK 68

Query: 689 KHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 748
              + G ++F+D S EE           +T   + A R+   +    V+    +P + DW
Sbjct: 69  VSYKKGINKFTDMSQEEF----------KTMLTLSASRKPTLETTSYVKTGVEIPSSVDW 118

Query: 749 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-GCDGC 807
           RK+       DQ  CGSCWAFSI G  EG YA K+GKLV  S+ QL++C    S GCDG 
Sbjct: 119 RKEGRVTGVKDQGDCGSCWAFSITGSTEGAYARKSGKLVSLSEQQLIDCCTDTSAGCDGG 178

Query: 808 FFEPSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETMKKI 866
             + + +Y  + GL+SE+ Y YK  +G  K+  A   +KV  +T    +     + + + 
Sbjct: 179 SLDDNFKYVMKDGLQSEESYTYKGEDGACKYNVASVVTKVSKYTS---IPAEDEDALLEA 235

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926
           +   GP+SV +++  +  Y+       D+ CSP  L HA+L VGYG ++   YW+++NSW
Sbjct: 236 VATVGPVSVGMDASYLSSYDSGIYE--DQDCSPAGLNHAILAVGYGTENGKDYWIIKNSW 293

Query: 927 GPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           G    ++G+F++ RG N CGI +   Y TID
Sbjct: 294 GASWGEQGYFRLARGKNQCGISEDTVYPTID 324



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 170/333 (51%), Gaps = 35/333 (10%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GH-------K 322
           +AI  S++   E +   F+AF ++ G+ Y N  E  +RF  F  +      H       K
Sbjct: 12  VAISASIS---EELGAKFQAFKLEHGKTYLNQAEESKRFNIFTDNVRAIEAHNALYEQGK 68

Query: 323 KHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 382
              + G ++F+D S EE           +T   + A R+   +    V+    +P + DW
Sbjct: 69  VSYKKGINKFTDMSQEEF----------KTMLTLSASRKPTLETTSYVKTGVEIPSSVDW 118

Query: 383 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCD 442
           RK+       DQ  CGSCWAFSI G  EG YA K+GKLV  S+ QL++C    S   GCD
Sbjct: 119 RKEGRVTGVKDQGDCGSCWAFSITGSTEGAYARKSGKLVSLSEQQLIDCCTDTS--AGCD 176

Query: 443 G--LEQPIEYTHQAGLESEKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSETMK 499
           G  L+   +Y  + GL+SE+ Y Y+  +G  K+  A   +KV  +T    +     + + 
Sbjct: 177 GGSLDDNFKYVMKDGLQSEESYTYKGEDGACKYNVASVVTKVSKYTS---IPAEDEDALL 233

Query: 500 KILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARN 559
           + +   GP+SVG+++  +  Y+       D+ CSP  L HA+L VGYG ++   YW+ +N
Sbjct: 234 EAVATVGPVSVGMDASYLSSYDSGIYE--DQDCSPAGLNHAILAVGYGTENGKDYWIIKN 291

Query: 560 SWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           SWG    ++G+F++ RG N CGI +   Y TID
Sbjct: 292 SWGASWGEQGYFRLARGKNQCGISEDTVYPTID 324



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/218 (38%), Positives = 126/218 (57%), Gaps = 7/218 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P + DWRK+       DQ DCGSCWAFSI G  EG YA K+GKLV  S+ QL++C    
Sbjct: 112 IPSSVDWRKEGRVTGVKDQGDCGSCWAFSITGSTEGAYARKSGKLVSLSEQQLIDCCTDT 171

Query: 71  S-GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNG 128
           S GCDG   + + +Y  + GL+SE+ Y YK  +G  K+  A   +KV  +T    +    
Sbjct: 172 SAGCDGGSLDDNFKYVMKDGLQSEESYTYKGEDGACKYNVASVVTKVSKYTS---IPAED 228

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + + + +   GP+SV +++  +  Y+       D+ CSP  L HA+L VGYG ++   Y
Sbjct: 229 EDALLEAVATVGPVSVGMDASYLSSYDSGIYE--DQDCSPAGLNHAILAVGYGTENGKDY 286

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           W+++NSWG    ++G+F++ RG N CGI +   Y TID
Sbjct: 287 WIIKNSWGASWGEQGYFRLARGKNQCGISEDTVYPTID 324



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 44/67 (65%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +  D+ CSP  L HA+L VGYG ++   YW+++NSWG    ++G+F++ RG N CGI + 
Sbjct: 258  IYEDQDCSPAGLNHAILAVGYGTENGKDYWIIKNSWGASWGEQGYFRLARGKNQCGISED 317

Query: 1019 AGYATID 1025
              Y TID
Sbjct: 318  TVYPTID 324


>gi|156389068|ref|XP_001634814.1| predicted protein [Nematostella vectensis]
 gi|156221901|gb|EDO42751.1| predicted protein [Nematostella vectensis]
          Length = 276

 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 143/268 (53%), Gaps = 15/268 (5%)

Query: 326 RYGTSEFSDRSPEEILCKTGFK-WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK 384
           +YG + FSD S EE   +     W +  YE   A+              G +P++ DWR 
Sbjct: 23  QYGPTIFSDLSEEEFRKQKMMPGWGKPLYEMKDAEIPL-----------GDIPESVDWRD 71

Query: 385 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL 444
           K V  P  +Q +CGSCWAFS  G +EGQYAIKTGKLV  S+ +LV+C     GC G    
Sbjct: 72  KGVVTPVKNQGSCGSCWAFSTTGNIEGQYAIKTGKLVSLSEQELVDCDTIDKGCEGGLPS 131

Query: 445 EQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYK 504
               +     GLESE DYPY+   G   KC ++K++VK+      +     + +   L K
Sbjct: 132 NAYKQIEKLGGLESESDYPYK---GADSKCKFNKAEVKVTINSSVVISKDEKEIAAWLAK 188

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPI 564
            GP+S+G+N++ + FY G         C+P  L H VL+VGYG ++  PYW+ +NSWGP 
Sbjct: 189 NGPISIGINANAMQFYMGGIAHPWKIFCNPSSLNHGVLIVGYGVKNGTPYWIIKNSWGPS 248

Query: 565 GPDEGFFKIERGNNACGIEQIAGYATID 592
             ++G++ I RG   CG+  +   A ID
Sbjct: 249 WGEKGYYLIYRGGGCCGLNTMCTSAVID 276



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/270 (38%), Positives = 146/270 (54%), Gaps = 20/270 (7%)

Query: 692 RYGTSEFSDRSPEEILCKTGFK-WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK 750
           +YG + FSD S EE   +     W +  YE   A+              G +P++ DWR 
Sbjct: 23  QYGPTIFSDLSEEEFRKQKMMPGWGKPLYEMKDAEIPL-----------GDIPESVDWRD 71

Query: 751 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFE 810
           K V  P  +Q +CGSCWAFS  G +EGQYAIKTGKLV  S+ +LV+C     GC+G    
Sbjct: 72  KGVVTPVKNQGSCGSCWAFSTTGNIEGQYAIKTGKLVSLSEQELVDCDTIDKGCEGGL-- 129

Query: 811 PSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 867
           PS  Y       GLESE DYPYK A+    KC ++K++VK+      +     + +   L
Sbjct: 130 PSNAYKQIEKLGGLESESDYPYKGADS---KCKFNKAEVKVTINSSVVISKDEKEIAAWL 186

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927
            K GP+S+ +N++ +  Y G         C+P  L H VL+VGYG ++  PYW+++NSWG
Sbjct: 187 AKNGPISIGINANAMQFYMGGIAHPWKIFCNPSSLNHGVLIVGYGVKNGTPYWIIKNSWG 246

Query: 928 PIGPDEGFFKIERGNNACGIEQIAGYATID 957
           P   ++G++ I RG   CG+  +   A ID
Sbjct: 247 PSWGEKGYYLIYRGGGCCGLNTMCTSAVID 276



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/221 (41%), Positives = 128/221 (57%), Gaps = 8/221 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P++ DWR K V  P  +Q  CGSCWAFS  G +EGQYAIKTGKLV  S+ +LV+C  
Sbjct: 61  GDIPESVDWRDKGVVTPVKNQGSCGSCWAFSTTGNIEGQYAIKTGKLVSLSEQELVDCDT 120

Query: 69  QCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC+G    PS  Y       GLESE DYPYK A+    KC ++K++VK+      + 
Sbjct: 121 IDKGCEGGL--PSNAYKQIEKLGGLESESDYPYKGADS---KCKFNKAEVKVTINSSVVI 175

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L K GP+S+ +N++ +  Y G         C+P  L H VL+VGYG ++ 
Sbjct: 176 SKDEKEIAAWLAKNGPISIGINANAMQFYMGGIAHPWKIFCNPSSLNHGVLIVGYGVKNG 235

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            PYW+++NSWGP   ++G++ I RG   CG+  +   A ID
Sbjct: 236 TPYWIIKNSWGPSWGEKGYYLIYRGGGCCGLNTMCTSAVID 276


>gi|357216861|gb|AET71138.1| cysteine peptidase isoform b [Sphenophorus levis]
          Length = 324

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 169/336 (50%), Gaps = 29/336 (8%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 692
           ++A +  +A+  +L  ++    ++FK   +K G+ Y N  E  +RF  F+++  K     
Sbjct: 5   ILASLLVVAVSATLLKEDGAHFQSFK---LKHGKTYKNQAEETKRFAIFRENLRKIEAHN 61

Query: 693 -----------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
                       G ++F+D +  E   K       +T   IVA +        ++     
Sbjct: 62  AEYKQGIHSYTQGINKFADMTRAEF--KAMLATQVKTKPSIVATKT------FQLADGVS 113

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VP++ DWR +NV  P  DQA CGSCWAF++ G  EG YA+ TGKL  FS+ QLV+C    
Sbjct: 114 VPESIDWRSRNVVTPIKDQAQCGSCWAFAVVGSTEGAYALSTGKLTRFSEQQLVDCTTDL 173

Query: 802 S-GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
           + GCDG + + +  Y    GLE E DYPY   +G    C+Y+ SKV              
Sbjct: 174 NYGCDGGYLDDTFPYIQTNGLELESDYPYTGYDG---YCSYESSKVVTKVSSYVSVPANE 230

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           + + + +   GP+++ +N+D +  Y    I  +D+ C P  L H VL VGY  ++   YW
Sbjct: 231 QALLEAVGTAGPVAIAINADDLQFYFSGII--DDKYCDPEYLDHGVLAVGYDSENGRDYW 288

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           L++NSWG    + G+F+  RG N CG+++ A Y  I
Sbjct: 289 LIKNSWGADWGESGYFRFLRGQNICGVKEDAVYPLI 324



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 167/338 (49%), Gaps = 32/338 (9%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 326
           ++A +  +A+  +L  ++    ++FK   +K G+ Y N  E  +RF  F+++  K     
Sbjct: 5   ILASLLVVAVSATLLKEDGAHFQSFK---LKHGKTYKNQAEETKRFAIFRENLRKIEAHN 61

Query: 327 -----------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
                       G ++F+D +  E   K       +T   IVA +        ++     
Sbjct: 62  AEYKQGIHSYTQGINKFADMTRAEF--KAMLATQVKTKPSIVATKT------FQLADGVS 113

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VP++ DWR +NV  P  DQA CGSCWAF++ G  EG YA+ TGKL  FS+ QLV+C    
Sbjct: 114 VPESIDWRSRNVVTPIKDQAQCGSCWAFAVVGSTEGAYALSTGKLTRFSEQQLVDCTTDL 173

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN 493
           +   GCDG  L+    Y    GLE E DYPY   +G    C+Y+ SKV            
Sbjct: 174 N--YGCDGGYLDDTFPYIQTNGLELESDYPYTGYDG---YCSYESSKVVTKVSSYVSVPA 228

Query: 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIP 553
             + + + +   GP+++ +N+  + FY    I  +D+ C P  L H VL VGY  ++   
Sbjct: 229 NEQALLEAVGTAGPVAIAINADDLQFYFSGII--DDKYCDPEYLDHGVLAVGYDSENGRD 286

Query: 554 YWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           YWL +NSWG    + G+F+  RG N CG+++ A Y  I
Sbjct: 287 YWLIKNSWGADWGESGYFRFLRGQNICGVKEDAVYPLI 324



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 122/216 (56%), Gaps = 6/216 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VP++ DWR +NV  P  DQA CGSCWAF++ G  EG YA+ TGKL  FS+ QLV+C    
Sbjct: 114 VPESIDWRSRNVVTPIKDQAQCGSCWAFAVVGSTEGAYALSTGKLTRFSEQQLVDCTTDL 173

Query: 71  S-GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           + GCDG + + +  Y    GLE E DYPY   +G    C+Y+ SKV              
Sbjct: 174 NYGCDGGYLDDTFPYIQTNGLELESDYPYTGYDG---YCSYESSKVVTKVSSYVSVPANE 230

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           + + + +   GP+++ +N+D +  Y    I  +D+ C P  L H VL VGY  ++   YW
Sbjct: 231 QALLEAVGTAGPVAIAINADDLQFYFSGII--DDKYCDPEYLDHGVLAVGYDSENGRDYW 288

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           L++NSWG    + G+F+  RG N CG+++ A Y  I
Sbjct: 289 LIKNSWGADWGESGYFRFLRGQNICGVKEDAVYPLI 324



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 40/66 (60%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            + +D+ C P  L H VL VGY  ++   YWL++NSWG    + G+F+  RG N CG+++ 
Sbjct: 259  IIDDKYCDPEYLDHGVLAVGYDSENGRDYWLIKNSWGADWGESGYFRFLRGQNICGVKED 318

Query: 1019 AGYATI 1024
            A Y  I
Sbjct: 319  AVYPLI 324


>gi|85068702|gb|ABC69431.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/328 (36%), Positives = 163/328 (49%), Gaps = 31/328 (9%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     GCDG +  P 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDGGCDGGY--PP 183

Query: 813 IEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILY 868
             YT      GLE   DYPY    G    C  DKSK V    G   L  +     +K L 
Sbjct: 184 QTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSEKVQAQK-LR 239

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
             GPLS  LN+D +  Y G  +R     C P  + HAVL VGYG Q+  PYW+V+NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATI 956
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/328 (34%), Positives = 159/328 (48%), Gaps = 30/328 (9%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C       GGCDG   
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYL---DGGCDGGYP 182

Query: 447 PIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
           P  YT      GLE   DYPY    G    C  DKSK   +     +     +   + L 
Sbjct: 183 PQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSEKVQAQKLR 239

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GPLS  LN+  +  Y G  +R     C P  + HAVL VGYG Q+  PYW+ +NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 93/217 (42%), Positives = 116/217 (53%), Gaps = 12/217 (5%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDGG 176

Query: 73  CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNG 128
           CDG +  P   YT      GLE   DYPY    G    C  DKSK V    G   L  + 
Sbjct: 177 CDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSE 231

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
               +K L   GPLS  LN+D +  Y G  +R     C P  + HAVL VGYG Q+  PY
Sbjct: 232 KVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPY 288

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 289 WIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + HAVL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 266  CDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325


>gi|85068704|gb|ABC69432.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/328 (36%), Positives = 164/328 (50%), Gaps = 31/328 (9%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE          E  Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF---------ETRYLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     GCDG +  P 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDDGCDGGY--PP 183

Query: 813 IEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILY 868
             YT      GLE   DYPY    G    C  DKSK V    G   L  +     +K L 
Sbjct: 184 QTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQK-LR 239

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
             GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+V+NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATI 956
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTARI 325



 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/328 (34%), Positives = 159/328 (48%), Gaps = 30/328 (9%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE          E  Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF---------ETRYLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C        GCDG   
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDD---GCDGGYP 182

Query: 447 PIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
           P  YT      GLE   DYPY    G    C  DKSK   +     +     +   + L 
Sbjct: 183 PQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQKLR 239

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GPLS  LN+  +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+ +NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTARI 325



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/217 (42%), Positives = 117/217 (53%), Gaps = 12/217 (5%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDDG 176

Query: 73  CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNG 128
           CDG +  P   YT      GLE   DYPY    G    C  DKSK V    G   L  + 
Sbjct: 177 CDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSE 231

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
               +K L   GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PY
Sbjct: 232 KVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPY 288

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 289 WIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + HAVL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 266  CDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325


>gi|268554660|ref|XP_002635317.1| C. briggsae CBR-TAG-196 protein [Caenorhabditis briggsae]
          Length = 477

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 161/315 (51%), Gaps = 17/315 (5%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 338
           I  +F  FI +  ++Y+N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 170 IWNSFLDFIDRHEKRYSNKREVLKRFRTFKKNAKVIRELQKNEQGSAVYGFTKFSDMTTM 229

Query: 339 EI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E       ++W +  Y    AD EK    + E +    +PD++DWR         +Q  C
Sbjct: 230 EFKQTMLPYQWEQPVYPMAEADFEKEGVTISEDD----LPDSFDWRDHGAVTQVKNQGNC 285

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLE 457
           GSCWAFS  G +EG + +   KLV  S+ +LV+C     GC G        E     GLE
Sbjct: 286 GSCWAFSTTGNVEGAWYLAKKKLVSLSEQELVDCDSVDQGCNGGLPSNAYKEIMRMGGLE 345

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
            E  YPY +G GE   C   +  + ++        +    ++K L   GP+S+GLN++ +
Sbjct: 346 PEDAYPY-DGKGET--CHIVRKDIAVYINGSVELPHDEVKIQKWLVTKGPISIGLNANTL 402

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY    +      C P+ L H VL+VGYGK    PYW+ +NSWGP   + G+F++ RG 
Sbjct: 403 QFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGESGYFRLYRGK 462

Query: 578 NACGIEQIAGYATID 592
           N CG++++A  A ++
Sbjct: 463 NVCGVQEMATSALVN 477



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 162/317 (51%), Gaps = 22/317 (6%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 704
           I  +F  FI +  ++Y+N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 170 IWNSFLDFIDRHEKRYSNKREVLKRFRTFKKNAKVIRELQKNEQGSAVYGFTKFSDMTTM 229

Query: 705 EI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E       ++W +  Y    AD EK    + E +    +PD++DWR         +Q  C
Sbjct: 230 EFKQTMLPYQWEQPVYPMAEADFEKEGVTISEDD----LPDSFDWRDHGAVTQVKNQGNC 285

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EG + +   KLV  S+ +LV+C     GC+G    PS  Y       G
Sbjct: 286 GSCWAFSTTGNVEGAWYLAKKKLVSLSEQELVDCDSVDQGCNGGL--PSNAYKEIMRMGG 343

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           LE E  YPY   +G+   C   +  + ++        +    ++K L   GP+S+ LN++
Sbjct: 344 LEPEDAYPY---DGKGETCHIVRKDIAVYINGSVELPHDEVKIQKWLVTKGPISIGLNAN 400

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +  Y    +      C P+ L H VL+VGYGK    PYW+V+NSWGP   + G+F++ R
Sbjct: 401 TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGESGYFRLYR 460

Query: 941 GNNACGIEQIAGYATID 957
           G N CG++++A  A ++
Sbjct: 461 GKNVCGVQEMATSALVN 477



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD++DWR         +Q +CGSCWAFS  G +EG + +   KLV  S+ +LV+C    
Sbjct: 264 LPDSFDWRDHGAVTQVKNQGNCGSCWAFSTTGNVEGAWYLAKKKLVSLSEQELVDCDSVD 323

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC+G    PS  Y       GLE E  YPY   +G+   C   +  + ++        +
Sbjct: 324 QGCNGGL--PSNAYKEIMRMGGLEPEDAYPY---DGKGETCHIVRKDIAVYINGSVELPH 378

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               ++K L   GP+S+ LN++ +  Y    +      C P+ L H VL+VGYGK    P
Sbjct: 379 DEVKIQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKP 438

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW+V+NSWGP   + G+F++ RG N CG++++A  A ++
Sbjct: 439 YWIVKNSWGPTWGESGYFRLYRGKNVCGVQEMATSALVN 477


>gi|195054270|ref|XP_001994049.1| GH22731 [Drosophila grimshawi]
 gi|193895919|gb|EDV94785.1| GH22731 [Drosophila grimshawi]
          Length = 617

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/324 (34%), Positives = 169/324 (52%), Gaps = 34/324 (10%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPE 338
           I   F  F +K  RQYAN  E + R   F+Q+           +   +YG ++F+D +  
Sbjct: 307 IEHLFHKFQLKYKRQYANTAEHQMRLRIFRQNLRTIEELNANERGSAKYGITQFADMTST 366

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E     G  W +R+ ++       V          G +P  +DWR+K       +Q  CG
Sbjct: 367 EYKLHAGL-W-QRSEDKPTGGAAAVVPPYA-----GEMPKEFDWRQKKAVTHVKNQGQCG 419

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGL 456
           SCWAFS+ G +EG YAIKTG+L EFS+ +L++C    S C G   D   + I+     GL
Sbjct: 420 SCWAFSVTGNIEGLYAIKTGELEEFSEQELLDCDSTDSACNGGLMDNAYKAIKDI--GGL 477

Query: 457 ESEKDYPYRNGNGEKFKCAYDK--SKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLN 513
           E E +YPY     +K +C +++  S V+L    D     G+ET M++ L   GP+S+GLN
Sbjct: 478 EYESEYPYA---AKKMQCHFNRTMSHVQLSGFVDLP--KGNETAMQEWLLSNGPISIGLN 532

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPD 567
           ++ + FY G         CS  +L H VL+VGYG  D       +PYW+ +NSWGP   +
Sbjct: 533 ANAMQFYRGGVSHPWAPLCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGE 592

Query: 568 EGFFKIERGNNACGIEQIAGYATI 591
           +G+++I RG+N CG+ ++A  A +
Sbjct: 593 QGYYRIYRGDNTCGVSEMATSAVL 616



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 168/322 (52%), Gaps = 31/322 (9%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPE 704
           I   F  F +K  RQYAN  E + R   F+Q+           +   +YG ++F+D +  
Sbjct: 307 IEHLFHKFQLKYKRQYANTAEHQMRLRIFRQNLRTIEELNANERGSAKYGITQFADMTST 366

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E     G  W +R+ ++       V          G +P  +DWR+K       +Q  CG
Sbjct: 367 EYKLHAGL-W-QRSEDKPTGGAAAVVPPYA-----GEMPKEFDWRQKKAVTHVKNQGQCG 419

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLES 823
           SCWAFS+ G +EG YAIKTG+L EFS+ +L++C    S C+G   + + +      GLE 
Sbjct: 420 SCWAFSVTGNIEGLYAIKTGELEEFSEQELLDCDSTDSACNGGLMDNAYKAIKDIGGLEY 479

Query: 824 EKDYPYKNANGEKFKCAYDK--SKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSD 880
           E +YPY     +K +C +++  S V+L    D     G+ET M++ L   GP+S+ LN++
Sbjct: 480 ESEYPYA---AKKMQCHFNRTMSHVQLSGFVDLP--KGNETAMQEWLLSNGPISIGLNAN 534

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEG 934
            +  Y G         CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G
Sbjct: 535 AMQFYRGGVSHPWAPLCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQG 594

Query: 935 FFKIERGNNACGIEQIAGYATI 956
           +++I RG+N CG+ ++A  A +
Sbjct: 595 YYRIYRGDNTCGVSEMATSAVL 616



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 132/227 (58%), Gaps = 15/227 (6%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P  +DWR+K       +Q  CGSCWAFS+ G +EG YAIKTG+L EFS+ +L++C  
Sbjct: 395 GEMPKEFDWRQKKAVTHVKNQGQCGSCWAFSVTGNIEGLYAIKTGELEEFSEQELLDCDS 454

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDK--SKVKLFTGKDFLH 125
             S C+G   + + +      GLE E +YPY     +K +C +++  S V+L    D   
Sbjct: 455 TDSACNGGLMDNAYKAIKDIGGLEYESEYPYA---AKKMQCHFNRTMSHVQLSGFVDLP- 510

Query: 126 FNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
             G+ET M++ L   GP+S+ LN++ +  Y G         CS  +L H VL+VGYG  D
Sbjct: 511 -KGNETAMQEWLLSNGPISIGLNANAMQFYRGGVSHPWAPLCSKKNLDHGVLIVGYGVSD 569

Query: 185 ------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                  +PYW+V+NSWGP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 570 YPNFHKTLPYWIVKNSWGPRWGEQGYYRIYRGDNTCGVSEMATSAVL 616


>gi|85068698|gb|ABC69429.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/328 (36%), Positives = 164/328 (50%), Gaps = 31/328 (9%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   KT +         +  D    E + M+ EK       +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF--KTRYLRMRFDGPIVSEDPSPEEDVTMDNEK-------FDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     GCDG +  P 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDGGCDGGY--PP 183

Query: 813 IEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILY 868
             YT      GLE   DYPY    G    C  DKSK V    G   L  +     +K L 
Sbjct: 184 QTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSEKVQAQK-LR 239

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
             GPLS  LN+D +  Y G  +R     C P  + HAVL VGYG Q+  PYW+V+NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATI 956
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTARI 325



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/328 (35%), Positives = 160/328 (48%), Gaps = 30/328 (9%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   KT +         +  D    E + M+ EK       +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF--KTRYLRMRFDGPIVSEDPSPEEDVTMDNEK-------FDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C       GGCDG   
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYL---DGGCDGGYP 182

Query: 447 PIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
           P  YT      GLE   DYPY    G    C  DKSK   +     +     +   + L 
Sbjct: 183 PQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSEKVQAQKLR 239

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GPLS  LN+  +  Y G  +R     C P  + HAVL VGYG Q+  PYW+ +NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTARI 325



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/217 (42%), Positives = 116/217 (53%), Gaps = 12/217 (5%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDGG 176

Query: 73  CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNG 128
           CDG +  P   YT      GLE   DYPY    G    C  DKSK V    G   L  + 
Sbjct: 177 CDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSE 231

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
               +K L   GPLS  LN+D +  Y G  +R     C P  + HAVL VGYG Q+  PY
Sbjct: 232 KVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPY 288

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 289 WIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + HAVL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 266  CDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325


>gi|116242314|gb|ABJ89814.1| cysteine protease preprotein [Clonorchis sinensis]
          Length = 326

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 162/327 (49%), Gaps = 29/327 (8%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     GCDG +  P 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDDGCDGGY--PP 183

Query: 813 IEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYK 869
             YT      GLE   DYPY    G    C  DKSK   +     +     +   + L  
Sbjct: 184 QTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQKLRA 240

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+V+NSWG  
Sbjct: 241 IGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGED 298

Query: 930 GPDEGFFKIERGNNACGIEQIAGYATI 956
             +EG+F+I RG+  CGI  I   A I
Sbjct: 299 FGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 159/328 (48%), Gaps = 30/328 (9%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C        GCDG   
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDD---GCDGGYP 182

Query: 447 PIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
           P  YT      GLE   DYPY    G    C  DKSK   +     +     +   + L 
Sbjct: 183 PQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQKLR 239

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GPLS  LN+  +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+ +NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/216 (41%), Positives = 115/216 (53%), Gaps = 10/216 (4%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDDG 176

Query: 73  CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           CDG +  P   YT      GLE   DYPY    G    C  DKSK   +     +     
Sbjct: 177 CDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSE 231

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           +   + L   GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PYW
Sbjct: 232 KVQAQKLRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYW 289

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 290 IVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + HAVL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 266  CDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325


>gi|29567137|ref|NP_818699.1| cathepsin [Adoxophyes honmai NPV]
 gi|37076951|sp|Q80LP4.1|CATV_NPVAH RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|29467913|dbj|BAC67303.1| cathepsin [Adoxophyes honmai NPV]
          Length = 337

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 165/337 (48%), Gaps = 22/337 (6%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 692
            +  V +  IEG L FD  +    F+ FI+   +QY + +    RF+ FKQ+    +E+ 
Sbjct: 8   TILLVASSQIEGHLKFDIHDAQHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKN 67

Query: 693 -------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD--GPVP 743
                  Y  ++FSD S  E+L K     S++    + +       + ++   D    +P
Sbjct: 68  KLNDSAIYNINKFSDLSKNELLTKYTGLTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELP 127

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
             +DWR  N      DQ ACGSCWA +  G LE  YAIK   L+  S+ QL++C      
Sbjct: 128 QNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDSANMA 187

Query: 804 CDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG--KDFLHFNGS 860
           CDG     + E    A GL  E DYPY+   G K  C  D  K  L     K ++ F   
Sbjct: 188 CDGGLMHTAFEQLMNAGGLMEEIDYPYQ---GTKGVCKIDNKKFALSVSSCKRYI-FQNE 243

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E +KK L   GP+++ +++  I  Y+   I      C    L HAVLLVGYG +  + YW
Sbjct: 244 ENLKKELITMGPIAMAIDAASISTYSKGIIH----FCENLGLNHAVLLVGYGTEGGVSYW 299

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYATI 956
            ++NSWG    ++G+F+++R  NACG+  Q+A  ATI
Sbjct: 300 TLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASATI 336



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/338 (32%), Positives = 162/338 (47%), Gaps = 23/338 (6%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 326
            +  V +  IEG L FD  +    F+ FI+   +QY + +    RF+ FKQ+    +E+ 
Sbjct: 8   TILLVASSQIEGHLKFDIHDAQHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKN 67

Query: 327 -------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD--GPVP 377
                  Y  ++FSD S  E+L K     S++    + +       + ++   D    +P
Sbjct: 68  KLNDSAIYNINKFSDLSKNELLTKYTGLTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELP 127

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             +DWR  N      DQ ACGSCWA +  G LE  YAIK   L+  S+ QL++C      
Sbjct: 128 QNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDSANMA 187

Query: 438 CGGCDGLEQPI--EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNG 494
           C G  GL      +  +  GL  E DYPY+   G K  C  D  K  L       Y F  
Sbjct: 188 CDG--GLMHTAFEQLMNAGGLMEEIDYPYQ---GTKGVCKIDNKKFALSVSSCKRYIFQN 242

Query: 495 SETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPY 554
            E +KK L   GP+++ +++  I  Y+   I      C    L HAVLLVGYG +  + Y
Sbjct: 243 EENLKKELITMGPIAMAIDAASISTYSKGIIH----FCENLGLNHAVLLVGYGTEGGVSY 298

Query: 555 WLARNSWGPIGPDEGFFKIERGNNACGI-EQIAGYATI 591
           W  +NSWG    ++G+F+++R  NACG+  Q+A  ATI
Sbjct: 299 WTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASATI 336



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 114/219 (52%), Gaps = 12/219 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR  N      DQ  CGSCWA +  G LE  YAIK   L+  S+ QL++C    
Sbjct: 126 LPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDSAN 185

Query: 71  SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG--KDFLHFN 127
             CDG     + E    A GL  E DYPY+   G K  C  D  K  L     K ++ F 
Sbjct: 186 MACDGGLMHTAFEQLMNAGGLMEEIDYPYQ---GTKGVCKIDNKKFALSVSSCKRYI-FQ 241

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E +KK L   GP+++ +++  I  Y+   I      C    L HAVLLVGYG +  + 
Sbjct: 242 NEENLKKELITMGPIAMAIDAASISTYSKGIIH----FCENLGLNHAVLLVGYGTEGGVS 297

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYATI 225
           YW ++NSWG    ++G+F+++R  NACG+  Q+A  ATI
Sbjct: 298 YWTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASATI 336



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYAT 1023
            C    L HAVLLVGYG +  + YW ++NSWG    ++G+F+++R  NACG+  Q+A  AT
Sbjct: 276  CENLGLNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASAT 335

Query: 1024 I 1024
            I
Sbjct: 336  I 336


>gi|30575714|gb|AAP33049.1| cysteine proteinase 1 [Clonorchis sinensis]
          Length = 326

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/328 (35%), Positives = 164/328 (50%), Gaps = 31/328 (9%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFTLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     GCDG +  P 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDDGCDGGY--PP 183

Query: 813 IEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILY 868
             YT      GLE   DYPY    G    C  DKSK V    G   L  +     +K L 
Sbjct: 184 QTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQK-LR 239

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
             GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+V+NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATI 956
              ++G+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEKGYFRIYRGDGTCGINSIVTTAII 325



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 159/328 (48%), Gaps = 30/328 (9%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFTLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C        GCDG   
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDD---GCDGGYP 182

Query: 447 PIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
           P  YT      GLE   DYPY    G    C  DKSK   +     +     +   + L 
Sbjct: 183 PQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQKLR 239

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GPLS  LN+  +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+ +NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              ++G+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEKGYFRIYRGDGTCGINSIVTTAII 325



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/217 (42%), Positives = 117/217 (53%), Gaps = 12/217 (5%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDDG 176

Query: 73  CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNG 128
           CDG +  P   YT      GLE   DYPY    G    C  DKSK V    G   L  + 
Sbjct: 177 CDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSE 231

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
               +K L   GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PY
Sbjct: 232 KVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPY 288

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+V+NSWG    ++G+F+I RG+  CGI  I   A I
Sbjct: 289 WIVKNSWGEDFGEKGYFRIYRGDGTCGINSIVTTAII 325



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + HAVL VGYG Q+  PYW+V+NSWG    ++G+F+I RG+  CGI  I   A I
Sbjct: 266  CDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEKGYFRIYRGDGTCGINSIVTTAII 325


>gi|24644155|ref|NP_730901.1| CG12163, isoform A [Drosophila melanogaster]
 gi|32699625|sp|Q9VN93.2|CPR1_DROME RecName: Full=Putative cysteine proteinase CG12163; Flags:
           Precursor
 gi|23170427|gb|AAF52055.2| CG12163, isoform A [Drosophila melanogaster]
 gi|27819876|gb|AAO24986.1| LP08529p [Drosophila melanogaster]
          Length = 614

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 180/356 (50%), Gaps = 32/356 (8%)

Query: 254 CLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF 313
           C   P +  R T  V         + S  FD  + L  F  F V+ GR+Y +  E + R 
Sbjct: 272 CRNQPVVQARHTRSVEWAEKKTHKKHSHRFDKVDHL--FYKFQVRFGRRYVSTAERQMRL 329

Query: 314 EYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE 364
             F+Q+     E         +YG +EF+D +  E   +TG  W +R   +       V 
Sbjct: 330 RIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL-W-QRDEAKATGGSAAVV 387

Query: 365 KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFS 424
                    G +P  +DWR+K+      +Q +CGSCWAFS+ G +EG YA+KTG+L EFS
Sbjct: 388 PAY-----HGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFS 442

Query: 425 KSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVK 482
           + +L++C    S C G   D   + I+     GLE E +YPY+    +K +C ++++   
Sbjct: 443 EQELLDCDTTDSACNGGLMDNAYKAIKDI--GGLEYEAEYPYK---AKKNQCHFNRTLSH 497

Query: 483 LFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAV 541
           +          G+ET M++ L   GP+S+G+N++ + FY G         CS  +L H V
Sbjct: 498 VQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGV 557

Query: 542 LLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           L+VGYG  D       +PYW+ +NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 558 LVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 613



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 179/354 (50%), Gaps = 29/354 (8%)

Query: 620 CLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF 679
           C   P +  R T  V         + S  FD  + L  F  F V+ GR+Y +  E + R 
Sbjct: 272 CRNQPVVQARHTRSVEWAEKKTHKKHSHRFDKVDHL--FYKFQVRFGRRYVSTAERQMRL 329

Query: 680 EYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE 730
             F+Q+     E         +YG +EF+D +  E   +TG  W +R   +       V 
Sbjct: 330 RIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL-W-QRDEAKATGGSAAVV 387

Query: 731 KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFS 790
                    G +P  +DWR+K+      +Q +CGSCWAFS+ G +EG YA+KTG+L EFS
Sbjct: 388 PAY-----HGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFS 442

Query: 791 KSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLF 849
           + +L++C    S C+G   + + +      GLE E +YPYK    +K +C ++++   + 
Sbjct: 443 EQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYK---AKKNQCHFNRTLSHVQ 499

Query: 850 TGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 908
                    G+ET M++ L   GP+S+ +N++ +  Y G         CS  +L H VL+
Sbjct: 500 VAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLV 559

Query: 909 VGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           VGYG  D       +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 560 VGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 613



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 131/225 (58%), Gaps = 11/225 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P  +DWR+K+      +Q  CGSCWAFS+ G +EG YA+KTG+L EFS+ +L++C  
Sbjct: 392 GELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDT 451

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             S C+G   + + +      GLE E +YPYK    +K +C ++++   +          
Sbjct: 452 TDSACNGGLMDNAYKAIKDIGGLEYEAEYPYK---AKKNQCHFNRTLSHVQVAGFVDLPK 508

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 184
           G+ET M++ L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  D  
Sbjct: 509 GNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYP 568

Query: 185 ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 569 NFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 613


>gi|2731635|gb|AAB93494.1| pre-procathepsin L [Paragonimus westermani]
          Length = 325

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/315 (34%), Positives = 156/315 (49%), Gaps = 25/315 (7%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRS 336
           +N  E ++ F    G+ YAN+++ K RF  FK         Q   +   +YG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQTQEQGTAKYGVTQFSDLT 84

Query: 337 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
            EE           R  ER+  DR ++  +          P + DWR+K   GP   Q +
Sbjct: 85  NEEF---AAMYLGSRIDERV--DRVQLNDLQT-------APASVDWREKGAVGPVEHQGS 132

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGL 456
           CGSCWAFS+   +EGQ+ +KTG+LV  SK QLV+C +   GC G        E     GL
Sbjct: 133 CGSCWAFSVTANVEGQWFLKTGRLVSLSKQQLVDCDRLDHGCSGGYPPYTYKEIKRMGGL 192

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL 516
           E +  YPY    G +  C  D+SK+        +     E     L ++GP+S  LN+  
Sbjct: 193 ELQSAYPY---TGWEQACRLDRSKLFAKIDDSIVLEKNEEKQAAWLAEHGPMSTCLNAGP 249

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
           + FY    +  ++  CSP  L HAVL VGY  +  +PYW  RNSWG    + G+F+I RG
Sbjct: 250 LQFYRYGILHPSEYACSPEGLNHAVLTVGYDTERGVPYWTVRNSWGTRWGENGYFRIYRG 309

Query: 577 NNACGIEQIAGYATI 591
           +  CGI+++   A I
Sbjct: 310 DGTCGIDRLTTSAII 324



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 158/317 (49%), Gaps = 30/317 (9%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRS 702
           +N  E ++ F    G+ YAN+++ K RF  FK         Q   +   +YG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQTQEQGTAKYGVTQFSDLT 84

Query: 703 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
            EE           R  ER+  DR ++  +          P + DWR+K   GP   Q +
Sbjct: 85  NEEF---AAMYLGSRIDERV--DRVQLNDLQT-------APASVDWREKGAVGPVEHQGS 132

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQA 819
           CGSCWAFS+   +EGQ+ +KTG+LV  SK QLV+C +   GC G +  P   Y       
Sbjct: 133 CGSCWAFSVTANVEGQWFLKTGRLVSLSKQQLVDCDRLDHGCSGGY--PPYTYKEIKRMG 190

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GLE +  YPY    G +  C  D+SK+        +     E     L ++GP+S  LN+
Sbjct: 191 GLELQSAYPY---TGWEQACRLDRSKLFAKIDDSIVLEKNEEKQAAWLAEHGPMSTCLNA 247

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
             +  Y    +  ++  CSP  L HAVL VGY  +  +PYW VRNSWG    + G+F+I 
Sbjct: 248 GPLQFYRYGILHPSEYACSPEGLNHAVLTVGYDTERGVPYWTVRNSWGTRWGENGYFRIY 307

Query: 940 RGNNACGIEQIAGYATI 956
           RG+  CGI+++   A I
Sbjct: 308 RGDGTCGIDRLTTSAII 324



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 116/218 (53%), Gaps = 8/218 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P + DWR+K   GP   Q  CGSCWAFS+   +EGQ+ +KTG+LV  SK QLV+C +  
Sbjct: 112 APASVDWREKGAVGPVEHQGSCGSCWAFSVTANVEGQWFLKTGRLVSLSKQQLVDCDRLD 171

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC G +  P   Y       GLE +  YPY    G +  C  D+SK+        +   
Sbjct: 172 HGCSGGY--PPYTYKEIKRMGGLELQSAYPY---TGWEQACRLDRSKLFAKIDDSIVLEK 226

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E     L ++GP+S  LN+  +  Y    +  ++  CSP  L HAVL VGY  +  +P
Sbjct: 227 NEEKQAAWLAEHGPMSTCLNAGPLQFYRYGILHPSEYACSPEGLNHAVLTVGYDTERGVP 286

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           YW VRNSWG    + G+F+I RG+  CGI+++   A I
Sbjct: 287 YWTVRNSWGTRWGENGYFRIYRGDGTCGIDRLTTSAII 324



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP  L HAVL VGY  +  +PYW VRNSWG    + G+F+I RG+  CGI+++   A I
Sbjct: 265  CSPEGLNHAVLTVGYDTERGVPYWTVRNSWGTRWGENGYFRIYRGDGTCGIDRLTTSAII 324


>gi|24644153|ref|NP_649521.1| CG12163, isoform B [Drosophila melanogaster]
 gi|23170426|gb|AAN13266.1| CG12163, isoform B [Drosophila melanogaster]
 gi|378548248|gb|AFC17498.1| FI18603p1 [Drosophila melanogaster]
          Length = 475

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 180/356 (50%), Gaps = 32/356 (8%)

Query: 254 CLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF 313
           C   P +  R T  V         + S  FD  + L  F  F V+ GR+Y +  E + R 
Sbjct: 133 CRNQPVVQARHTRSVEWAEKKTHKKHSHRFDKVDHL--FYKFQVRFGRRYVSTAERQMRL 190

Query: 314 EYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE 364
             F+Q+     E         +YG +EF+D +  E   +TG  W +R   +       V 
Sbjct: 191 RIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL-W-QRDEAKATGGSAAVV 248

Query: 365 KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFS 424
                    G +P  +DWR+K+      +Q +CGSCWAFS+ G +EG YA+KTG+L EFS
Sbjct: 249 PAY-----HGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFS 303

Query: 425 KSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVK 482
           + +L++C    S C G   D   + I+     GLE E +YPY+    +K +C ++++   
Sbjct: 304 EQELLDCDTTDSACNGGLMDNAYKAIKDI--GGLEYEAEYPYK---AKKNQCHFNRTLSH 358

Query: 483 LFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAV 541
           +          G+ET M++ L   GP+S+G+N++ + FY G         CS  +L H V
Sbjct: 359 VQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGV 418

Query: 542 LLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           L+VGYG  D       +PYW+ +NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 419 LVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 474



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 179/354 (50%), Gaps = 29/354 (8%)

Query: 620 CLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF 679
           C   P +  R T  V         + S  FD  + L  F  F V+ GR+Y +  E + R 
Sbjct: 133 CRNQPVVQARHTRSVEWAEKKTHKKHSHRFDKVDHL--FYKFQVRFGRRYVSTAERQMRL 190

Query: 680 EYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE 730
             F+Q+     E         +YG +EF+D +  E   +TG  W +R   +       V 
Sbjct: 191 RIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL-W-QRDEAKATGGSAAVV 248

Query: 731 KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFS 790
                    G +P  +DWR+K+      +Q +CGSCWAFS+ G +EG YA+KTG+L EFS
Sbjct: 249 PAY-----HGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFS 303

Query: 791 KSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLF 849
           + +L++C    S C+G   + + +      GLE E +YPYK    +K +C ++++   + 
Sbjct: 304 EQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYK---AKKNQCHFNRTLSHVQ 360

Query: 850 TGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 908
                    G+ET M++ L   GP+S+ +N++ +  Y G         CS  +L H VL+
Sbjct: 361 VAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLV 420

Query: 909 VGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           VGYG  D       +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 421 VGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 474



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 131/225 (58%), Gaps = 11/225 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P  +DWR+K+      +Q  CGSCWAFS+ G +EG YA+KTG+L EFS+ +L++C  
Sbjct: 253 GELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDT 312

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             S C+G   + + +      GLE E +YPYK    +K +C ++++   +          
Sbjct: 313 TDSACNGGLMDNAYKAIKDIGGLEYEAEYPYK---AKKNQCHFNRTLSHVQVAGFVDLPK 369

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 184
           G+ET M++ L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  D  
Sbjct: 370 GNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYP 429

Query: 185 ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 430 NFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 474


>gi|209978824|ref|YP_002300567.1| cathepsin [Adoxophyes orana nucleopolyhedrovirus]
 gi|192758806|gb|ACF05341.1| cathepsin [Adoxophyes orana nucleopolyhedrovirus]
          Length = 337

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 164/337 (48%), Gaps = 22/337 (6%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 692
            +  V +  IEG L FD  +    F+ FIV   +QYA+ +    RF+ F Q+    +E+ 
Sbjct: 8   TILLVASSQIEGHLKFDIHDAQHYFETFIVNYNKQYADTKTKNYRFKIFVQNLEYINEKN 67

Query: 693 -------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG--PVP 743
                  Y  ++FSD S  E+L K     S +    + +       + ++   D    +P
Sbjct: 68  KLNDSAIYNINKFSDLSKNELLTKYTGLTSRKPSNMVKSTSNFCNVIHLDAPPDARDELP 127

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
             +DWR  N      DQ ACGSCWA +  G LE  YAIK   L+  S+ QL++C      
Sbjct: 128 QNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDSANMA 187

Query: 804 CDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG--KDFLHFNGS 860
           CDG     + E    A GL  E DYPY+   G K  C  D  K  L     K ++ F   
Sbjct: 188 CDGGLMHTAFEQLMNAGGLMEEIDYPYQ---GTKGICKIDNKKFALSVSSCKRYI-FQNE 243

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E +KK L   GP+++ +++  I  Y+   I      C    L HAVLLVGYG +  + YW
Sbjct: 244 ENLKKELITTGPIAMAIDAASISTYSKGIIH----FCENLGLNHAVLLVGYGTEGGVSYW 299

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYATI 956
            ++NSWG    ++G+F+++R  NACG+  Q+A  ATI
Sbjct: 300 TLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASATI 336



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 161/338 (47%), Gaps = 23/338 (6%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 326
            +  V +  IEG L FD  +    F+ FIV   +QYA+ +    RF+ F Q+    +E+ 
Sbjct: 8   TILLVASSQIEGHLKFDIHDAQHYFETFIVNYNKQYADTKTKNYRFKIFVQNLEYINEKN 67

Query: 327 -------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG--PVP 377
                  Y  ++FSD S  E+L K     S +    + +       + ++   D    +P
Sbjct: 68  KLNDSAIYNINKFSDLSKNELLTKYTGLTSRKPSNMVKSTSNFCNVIHLDAPPDARDELP 127

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             +DWR  N      DQ ACGSCWA +  G LE  YAIK   L+  S+ QL++C      
Sbjct: 128 QNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDSANMA 187

Query: 438 CGGCDGLEQPI--EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNG 494
           C G  GL      +  +  GL  E DYPY+   G K  C  D  K  L       Y F  
Sbjct: 188 CDG--GLMHTAFEQLMNAGGLMEEIDYPYQ---GTKGICKIDNKKFALSVSSCKRYIFQN 242

Query: 495 SETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPY 554
            E +KK L   GP+++ +++  I  Y+   I      C    L HAVLLVGYG +  + Y
Sbjct: 243 EENLKKELITTGPIAMAIDAASISTYSKGIIH----FCENLGLNHAVLLVGYGTEGGVSY 298

Query: 555 WLARNSWGPIGPDEGFFKIERGNNACGI-EQIAGYATI 591
           W  +NSWG    ++G+F+++R  NACG+  Q+A  ATI
Sbjct: 299 WTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASATI 336



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 114/219 (52%), Gaps = 12/219 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR  N      DQ  CGSCWA +  G LE  YAIK   L+  S+ QL++C    
Sbjct: 126 LPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDSAN 185

Query: 71  SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG--KDFLHFN 127
             CDG     + E    A GL  E DYPY+   G K  C  D  K  L     K ++ F 
Sbjct: 186 MACDGGLMHTAFEQLMNAGGLMEEIDYPYQ---GTKGICKIDNKKFALSVSSCKRYI-FQ 241

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E +KK L   GP+++ +++  I  Y+   I      C    L HAVLLVGYG +  + 
Sbjct: 242 NEENLKKELITTGPIAMAIDAASISTYSKGIIH----FCENLGLNHAVLLVGYGTEGGVS 297

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYATI 225
           YW ++NSWG    ++G+F+++R  NACG+  Q+A  ATI
Sbjct: 298 YWTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASATI 336



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYAT 1023
            C    L HAVLLVGYG +  + YW ++NSWG    ++G+F+++R  NACG+  Q+A  AT
Sbjct: 276  CENLGLNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASAT 335

Query: 1024 I 1024
            I
Sbjct: 336  I 336


>gi|195343593|ref|XP_002038380.1| GM10654 [Drosophila sechellia]
 gi|194133401|gb|EDW54917.1| GM10654 [Drosophila sechellia]
          Length = 615

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 180/357 (50%), Gaps = 33/357 (9%)

Query: 254 CLCLPSLTDRITDQVV-ARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER 312
           C   P +  R T  V  A   T        FD  + L  F  F V+ GR+Y +  E + R
Sbjct: 272 CRNQPVVQARHTRSVEWAEKKTHKKHSHRAFDKVDHL--FYKFQVRFGRRYVSTAERQMR 329

Query: 313 FEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 363
              F+Q+     E         +YG +EF+D +  E   +TG  W +R   +       V
Sbjct: 330 LRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL-W-QRDEAKATGGSAAV 387

Query: 364 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 423
                     G +P  +DWR+K+      +Q +CGSCWAFS+ G +EG YA+KTG+L EF
Sbjct: 388 VPAY-----HGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEF 442

Query: 424 SKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKV 481
           S+ +L++C    S C G   D   + I+     GLE E +YPY+    +K +C ++++  
Sbjct: 443 SEQELLDCDTTDSACNGGLMDNAYKAIKDI--GGLEYEAEYPYK---AKKNQCHFNRTLS 497

Query: 482 KLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHA 540
            +          G+ET M++ L   GP+S+G+N++ + FY G         CS  +L H 
Sbjct: 498 HVQVAGFVDLPKGNETAMQEWLLTNGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHG 557

Query: 541 VLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           VL+VGYG  D       +PYW+ +NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 558 VLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 614



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 179/355 (50%), Gaps = 30/355 (8%)

Query: 620 CLCLPSLTDRITDQVV-ARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER 678
           C   P +  R T  V  A   T        FD  + L  F  F V+ GR+Y +  E + R
Sbjct: 272 CRNQPVVQARHTRSVEWAEKKTHKKHSHRAFDKVDHL--FYKFQVRFGRRYVSTAERQMR 329

Query: 679 FEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 729
              F+Q+     E         +YG +EF+D +  E   +TG  W +R   +       V
Sbjct: 330 LRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL-W-QRDEAKATGGSAAV 387

Query: 730 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 789
                     G +P  +DWR+K+      +Q +CGSCWAFS+ G +EG YA+KTG+L EF
Sbjct: 388 VPAY-----HGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEF 442

Query: 790 SKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL 848
           S+ +L++C    S C+G   + + +      GLE E +YPYK    +K +C ++++   +
Sbjct: 443 SEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYK---AKKNQCHFNRTLSHV 499

Query: 849 FTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 907
                     G+ET M++ L   GP+S+ +N++ +  Y G         CS  +L H VL
Sbjct: 500 QVAGFVDLPKGNETAMQEWLLTNGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVL 559

Query: 908 LVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           +VGYG  D       +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 560 VVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 614



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 131/225 (58%), Gaps = 11/225 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P  +DWR+K+      +Q  CGSCWAFS+ G +EG YA+KTG+L EFS+ +L++C  
Sbjct: 393 GELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDT 452

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             S C+G   + + +      GLE E +YPYK    +K +C ++++   +          
Sbjct: 453 TDSACNGGLMDNAYKAIKDIGGLEYEAEYPYK---AKKNQCHFNRTLSHVQVAGFVDLPK 509

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 184
           G+ET M++ L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  D  
Sbjct: 510 GNETAMQEWLLTNGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYP 569

Query: 185 ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 570 NFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 614


>gi|383863617|ref|XP_003707276.1| PREDICTED: uncharacterized protein LOC100880620 [Megachile
           rotundata]
          Length = 884

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 161/316 (50%), Gaps = 27/316 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHER----YGTSEFSDRSPEEILC 342
           F+ F+    + Y + +E  +R++ F+++       +K E+    YG + F+D +PEE   
Sbjct: 579 FEDFVKTYNKTYLSAKEKADRYKVFRKNLKMIEKLRKFEQGTAVYGVTMFADLTPEEFKT 638

Query: 343 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
           K  G K +         ++E    +   V  D  +P  +DWR+ N   P  DQ  CGSCW
Sbjct: 639 KYLGLKTN--------LNQENDIPLQEAVIPDIDLPPKFDWREYNAVTPVKDQGQCGSCW 690

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKD 461
           AFS  G +EGQYAIK  KL+  S+ +LV+C     GCGG   +          GLE E D
Sbjct: 691 AFSAIGNIEGQYAIKHKKLLSLSEQELVDCDNLDDGCGGGYMINAYKTVEKLGGLELETD 750

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           YPY   N    KC + K+K K+         N  + M + L K GP+SVG+N++ + FY 
Sbjct: 751 YPYDARNE---KCHFLKNKAKVQVASALNITNDEKKMAQWLVKNGPISVGINANAMQFYF 807

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGK------QDDIPYWLARNSWGPIGPDEGFFKIER 575
           G         C P +L H VL+VGY        +  +PYW+ +NSWGP   ++G++++ R
Sbjct: 808 GGVSHPFKFLCDPANLDHGVLIVGYATSTYPLFKKKLPYWIIKNSWGPKWGEQGYYRVYR 867

Query: 576 GNNACGIEQIAGYATI 591
           G+  CG+  +A  A +
Sbjct: 868 GDGTCGVNAMASSAIV 883



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 162/316 (51%), Gaps = 28/316 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHER----YGTSEFSDRSPEEILC 708
           F+ F+    + Y + +E  +R++ F+++       +K E+    YG + F+D +PEE   
Sbjct: 579 FEDFVKTYNKTYLSAKEKADRYKVFRKNLKMIEKLRKFEQGTAVYGVTMFADLTPEEFKT 638

Query: 709 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
           K  G K +         ++E    +   V  D  +P  +DWR+ N   P  DQ  CGSCW
Sbjct: 639 KYLGLKTN--------LNQENDIPLQEAVIPDIDLPPKFDWREYNAVTPVKDQGQCGSCW 690

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKD 826
           AFS  G +EGQYAIK  KL+  S+ +LV+C     GC G +   + +   +  GLE E D
Sbjct: 691 AFSAIGNIEGQYAIKHKKLLSLSEQELVDCDNLDDGCGGGYMINAYKTVEKLGGLELETD 750

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 886
           YPY   N    KC + K+K K+         N  + M + L K GP+SV +N++ +  Y 
Sbjct: 751 YPYDARNE---KCHFLKNKAKVQVASALNITNDEKKMAQWLVKNGPISVGINANAMQFYF 807

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGK------QDNIPYWLVRNSWGPIGPDEGFFKIER 940
           G         C P +L H VL+VGY        +  +PYW+++NSWGP   ++G++++ R
Sbjct: 808 GGVSHPFKFLCDPANLDHGVLIVGYATSTYPLFKKKLPYWIIKNSWGPKWGEQGYYRVYR 867

Query: 941 GNNACGIEQIAGYATI 956
           G+  CG+  +A  A +
Sbjct: 868 GDGTCGVNAMASSAIV 883



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 122/225 (54%), Gaps = 10/225 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P  +DWR+ N   P  DQ  CGSCWAFS  G +EGQYAIK  KL+  S+ +LV+C 
Sbjct: 662 DIDLPPKFDWREYNAVTPVKDQGQCGSCWAFSAIGNIEGQYAIKHKKLLSLSEQELVDCD 721

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
               GC G +   + +   +  GLE E DYPY   N    KC + K+K K+         
Sbjct: 722 NLDDGCGGGYMINAYKTVEKLGGLELETDYPYDARNE---KCHFLKNKAKVQVASALNIT 778

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK---- 182
           N  + M + L K GP+SV +N++ +  Y G         C P +L H VL+VGY      
Sbjct: 779 NDEKKMAQWLVKNGPISVGINANAMQFYFGGVSHPFKFLCDPANLDHGVLIVGYATSTYP 838

Query: 183 --QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
             +  +PYW+++NSWGP   ++G++++ RG+  CG+  +A  A +
Sbjct: 839 LFKKKLPYWIIKNSWGPKWGEQGYYRVYRGDGTCGVNAMASSAIV 883



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 6/66 (9%)

Query: 965  CSPYDLGHAVLLVGYGK------QDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            C P +L H VL+VGY        +  +PYW+++NSWGP   ++G++++ RG+  CG+  +
Sbjct: 818  CDPANLDHGVLIVGYATSTYPLFKKKLPYWIIKNSWGPKWGEQGYYRVYRGDGTCGVNAM 877

Query: 1019 AGYATI 1024
            A  A +
Sbjct: 878  ASSAIV 883


>gi|18138384|ref|NP_542680.1| cathepsin [Helicoverpa zea SNPV]
 gi|209401110|ref|YP_002273979.1| viral cathepsin-like protein [Helicoverpa armigera NPV NNg1]
 gi|37077430|sp|Q8V5U0.1|CATV_NPVHZ RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|18028766|gb|AAL56202.1|AF334030_127 ORF57 [Helicoverpa zea SNPV]
 gi|209364362|dbj|BAG74621.1| viral cathepsin-like protein [Helicoverpa armigera NPV NNg1]
          Length = 367

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 170/322 (52%), Gaps = 36/322 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------------------YGTSE 697
           FK F+ +  + Y + +E + R+  FK + +K + +                    +G ++
Sbjct: 57  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 116

Query: 698 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
           FSD++P+E+L   TGF  +   +  +  +R      +++   D  +PD +DWR  N   P
Sbjct: 117 FSDKTPDEVLHSNTGFFLNLSQHYTLCENR------IVKGAPDIRLPDYYDWRDTNKVTP 170

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI-EY 815
             DQ  CGSCWAF   G +E QYAI+  KL++ S+ QL++C +   GC+G     +  E 
Sbjct: 171 IKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEVDLGCNGGLMHLAFQEL 230

Query: 816 THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSETMKKILYKYGPLS 874
               G+E+E DYPY+   G +  C  D  K+ +     F +       +K+++Y  GP++
Sbjct: 231 LLMGGVETEADYPYQ---GSEQMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVA 287

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEG 934
           + +++  I +Y    + +    C  YDL HAVLL+G+G ++N+PYW+++NSWG    + G
Sbjct: 288 IAVDAMDIINYRRGILNQ----CHIYDLNHAVLLIGWGIENNVPYWIIKNSWGEDWGENG 343

Query: 935 FFKIERGNNACGIEQIAGYATI 956
           F ++ R  NACG+    G +++
Sbjct: 344 FLRVRRNVNACGLLNEFGASSV 365



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 168/324 (51%), Gaps = 39/324 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------------------YGTSE 331
           FK F+ +  + Y + +E + R+  FK + +K + +                    +G ++
Sbjct: 57  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 116

Query: 332 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
           FSD++P+E+L   TGF  +   +  +  +R      +++   D  +PD +DWR  N   P
Sbjct: 117 FSDKTPDEVLHSNTGFFLNLSQHYTLCENR------IVKGAPDIRLPDYYDWRDTNKVTP 170

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI-- 448
             DQ  CGSCWAF   G +E QYAI+  KL++ S+ QL++C +   GC G  GL      
Sbjct: 171 IKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEVDLGCNG--GLMHLAFQ 228

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGSETMKKILYKYGP 507
           E     G+E+E DYPY+   G +  C  D  K+ +     F Y       +K+++Y  GP
Sbjct: 229 ELLLMGGVETEADYPYQ---GSEQMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGP 285

Query: 508 LSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPD 567
           +++ +++  I  Y    + +    C  YDL HAVLL+G+G ++++PYW+ +NSWG    +
Sbjct: 286 VAIAVDAMDIINYRRGILNQ----CHIYDLNHAVLLIGWGIENNVPYWIIKNSWGEDWGE 341

Query: 568 EGFFKIERGNNACGIEQIAGYATI 591
            GF ++ R  NACG+    G +++
Sbjct: 342 NGFLRVRRNVNACGLLNEFGASSV 365



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 125/220 (56%), Gaps = 9/220 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +PD +DWR  N   P  DQ  CGSCWAF   G +E QYAI+  KL++ S+ QL++C 
Sbjct: 153 DIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD 212

Query: 68  KQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH- 125
           +   GC+G     +  E     G+E+E DYPY+   G +  C  D  K+ +     F + 
Sbjct: 213 EVDLGCNGGLMHLAFQELLLMGGVETEADYPYQ---GSEQMCTLDNRKIAVKLNSCFKYD 269

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
                 +K+++Y  GP+++ +++  I +Y    + +    C  YDL HAVLL+G+G ++N
Sbjct: 270 IRDENKLKELVYTTGPVAIAVDAMDIINYRRGILNQ----CHIYDLNHAVLLIGWGIENN 325

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +PYW+++NSWG    + GF ++ R  NACG+    G +++
Sbjct: 326 VPYWIIKNSWGEDWGENGFLRVRRNVNACGLLNEFGASSV 365



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 42/60 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C  YDL HAVLL+G+G ++++PYW+++NSWG    + GF ++ R  NACG+    G +++
Sbjct: 306  CHIYDLNHAVLLIGWGIENNVPYWIIKNSWGEDWGENGFLRVRRNVNACGLLNEFGASSV 365


>gi|4760897|gb|AAD29130.1| cysteine proteinase 1 precursor [Clonorchis sinensis]
          Length = 328

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 164/326 (50%), Gaps = 22/326 (6%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   KT +         +  D    E + M+ EK       +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF--KTRYLRMRFDGPIVSEDPSPEEDVTMDNEK-------FDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     GC G    + 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLDKGCNGGYPPKT 185

Query: 447 PIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYG 506
             E     GLE   DYPY   +G    C  ++SK   +  +  +     +   + L + G
Sbjct: 186 YGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNESTVLPLSEKIQAQKLKEIG 242

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           PLS  LN+ L+ FY G  I      C+P+ L HAVL VGYG +  IPYW+ +NSWG    
Sbjct: 243 PLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIVKNSWGVGFG 302

Query: 567 DEGFFKIERGNNACGIEQIAGYATID 592
           ++G+F+I RG   CGI  +   A ID
Sbjct: 303 EKGYFRIFRGAGTCGINLVVSTAIID 328



 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 166/326 (50%), Gaps = 23/326 (7%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   KT +         +  D    E + M+ EK       +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF--KTRYLRMRFDGPIVSEDPSPEEDVTMDNEK-------FDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     GC+G +   +
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLDKGCNGGYPPKT 185

Query: 813 I-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG 871
             E     GLE   DYPY   +G    C  ++SK   +  +  +     +   + L + G
Sbjct: 186 YGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNESTVLPLSEKIQAQKLKEIG 242

Query: 872 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGP 931
           PLS  LN+ L+  Y G  I      C+P+ L HAVL VGYG +  IPYW+V+NSWG    
Sbjct: 243 PLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIVKNSWGVGFG 302

Query: 932 DEGFFKIERGNNACGIEQIAGYATID 957
           ++G+F+I RG   CGI  +   A ID
Sbjct: 303 EKGYFRIFRGAGTCGINLVVSTAIID 328



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 118/215 (54%), Gaps = 4/215 (1%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLDKG 176

Query: 73  CDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           C+G +   +  E     GLE   DYPY   +G    C  ++SK   +  +  +     + 
Sbjct: 177 CNGGYPPKTYGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNESTVLPLSEKI 233

Query: 132 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 191
             + L + GPLS  LN+ L+  Y G  I      C+P+ L HAVL VGYG +  IPYW+V
Sbjct: 234 QAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIV 293

Query: 192 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +NSWG    ++G+F+I RG   CGI  +   A ID
Sbjct: 294 KNSWGVGFGEKGYFRIFRGAGTCGINLVVSTAIID 328



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 41/61 (67%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ L HAVL VGYG +  IPYW+V+NSWG    ++G+F+I RG   CGI  +   A I
Sbjct: 268  CNPHGLNHAVLTVGYGTEFGIPYWIVKNSWGVGFGEKGYFRIFRGAGTCGINLVVSTAII 327

Query: 1025 D 1025
            D
Sbjct: 328  D 328


>gi|194746631|ref|XP_001955780.1| GF16067 [Drosophila ananassae]
 gi|190628817|gb|EDV44341.1| GF16067 [Drosophila ananassae]
          Length = 620

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 168/319 (52%), Gaps = 32/319 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           F  F V+ GR+Y +  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 314 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSTEYKE 373

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +TG  W +R   +       V          G +P  +DWR KN      +Q  CGSCWA
Sbjct: 374 RTGL-W-QRDEAKATGGSPAVVPAY-----SGELPKEFDWRSKNAVTGVKNQGQCGSCWA 426

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS+ G +EG YA+K G+L EFS+ +L++C    S C G   D   + I+     GLE E 
Sbjct: 427 FSVTGNIEGLYALKYGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDI--GGLEYEA 484

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSET-MKKILYKYGPLSVGLNSHLIH 518
           +YPY     +K +C ++K+   +   KDF+    G+ET M++ L   GP+S+G+N++ + 
Sbjct: 485 EYPYE---AKKKQCHFNKTMSHVQV-KDFVDLPKGNETAMQEWLVSNGPISIGINANAMQ 540

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFK 572
           FY G         CS  +L H VL+VGYG  D       +PYW+ +NSWGP   ++G+++
Sbjct: 541 FYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNYHKTLPYWIVKNSWGPRWGEQGYYR 600

Query: 573 IERGNNACGIEQIAGYATI 591
           + RG+N CG+ ++A  A +
Sbjct: 601 VYRGDNTCGVSEMATSAVL 619



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 168/317 (52%), Gaps = 29/317 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           F  F V+ GR+Y +  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 314 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSTEYKE 373

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +TG  W +R   +       V          G +P  +DWR KN      +Q  CGSCWA
Sbjct: 374 RTGL-W-QRDEAKATGGSPAVVPAY-----SGELPKEFDWRSKNAVTGVKNQGQCGSCWA 426

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           FS+ G +EG YA+K G+L EFS+ +L++C    S C+G   + + +      GLE E +Y
Sbjct: 427 FSVTGNIEGLYALKYGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEY 486

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLNSDLIHDY 885
           PY+    +K +C ++K+   +   KDF+    G+ET M++ L   GP+S+ +N++ +  Y
Sbjct: 487 PYE---AKKKQCHFNKTMSHVQV-KDFVDLPKGNETAMQEWLVSNGPISIGINANAMQFY 542

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIE 939
            G         CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G++++ 
Sbjct: 543 RGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNYHKTLPYWIVKNSWGPRWGEQGYYRVY 602

Query: 940 RGNNACGIEQIAGYATI 956
           RG+N CG+ ++A  A +
Sbjct: 603 RGDNTCGVSEMATSAVL 619



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 133/226 (58%), Gaps = 13/226 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P  +DWR KN      +Q  CGSCWAFS+ G +EG YA+K G+L EFS+ +L++C  
Sbjct: 398 GELPKEFDWRSKNAVTGVKNQGQCGSCWAFSVTGNIEGLYALKYGELKEFSEQELLDCDT 457

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             S C+G   + + +      GLE E +YPY+    +K +C ++K+   +   KDF+   
Sbjct: 458 TDSACNGGLMDNAYKAIKDIGGLEYEAEYPYE---AKKKQCHFNKTMSHVQV-KDFVDLP 513

Query: 127 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD- 184
            G+ET M++ L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  D 
Sbjct: 514 KGNETAMQEWLVSNGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY 573

Query: 185 -----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                 +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 574 PNYHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 619


>gi|432880227|ref|XP_004073613.1| PREDICTED: cathepsin F-like [Oryzias latipes]
          Length = 473

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 168/348 (48%), Gaps = 29/348 (8%)

Query: 256 CLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 315
           C P      T++V    ++  +E S+      +L  FK F+VK  + Y++ EE + R + 
Sbjct: 144 CSPKAEVEETNRVAEPTNSQPVEESV-----QLLGQFKDFMVKYKKDYSSQEEAERRLQI 198

Query: 316 FKQDGHKKHER----------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK 365
           F Q+  K  E+          YG ++FSD + EE            TY   +  +  + +
Sbjct: 199 F-QENLKTAEKLQALDQGSAEYGVTKFSDLTEEEF---------RSTYLNPLLSQWTLHR 248

Query: 366 -MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFS 424
            M        P PD+WDWR      P  +Q  CGSCWAFS+ G +EGQ+ +K G L+  S
Sbjct: 249 GMKPAPPAKTPAPDSWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLLSLS 308

Query: 425 KSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF 484
           + +LV+C      C G              GLESE DY Y    G K KC +   KV  +
Sbjct: 309 EQELVDCDGLDQACRGGLPSNAYEAIEKLGGLESETDYSY---TGHKQKCDFTNRKVAAY 365

Query: 485 TGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLV 544
                        +   L + GP+SV LN+  + FY           C+P+ + HAVLLV
Sbjct: 366 INSSVELPKDEREIAAWLAENGPISVALNAFAMQFYKKGVSHPWKIFCNPWMIDHAVLLV 425

Query: 545 GYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           GYG+++ IP+W  +NSWG    ++G++ ++RG+NACGI ++   A I+
Sbjct: 426 GYGERNGIPFWAIKNSWGEDYGEQGYYYLQRGSNACGINRMGSSAVIN 473



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 171/348 (49%), Gaps = 30/348 (8%)

Query: 622 CLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 681
           C P      T++V    ++  +E S+      +L  FK F+VK  + Y++ EE + R + 
Sbjct: 144 CSPKAEVEETNRVAEPTNSQPVEESV-----QLLGQFKDFMVKYKKDYSSQEEAERRLQI 198

Query: 682 FKQDGHKKHER----------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK 731
           F Q+  K  E+          YG ++FSD + EE            TY   +  +  + +
Sbjct: 199 F-QENLKTAEKLQALDQGSAEYGVTKFSDLTEEEF---------RSTYLNPLLSQWTLHR 248

Query: 732 -MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFS 790
            M        P PD+WDWR      P  +Q  CGSCWAFS+ G +EGQ+ +K G L+  S
Sbjct: 249 GMKPAPPAKTPAPDSWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLLSLS 308

Query: 791 KSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLF 849
           + +LV+C      C G     + E   +  GLESE DY Y    G K KC +   KV  +
Sbjct: 309 EQELVDCDGLDQACRGGLPSNAYEAIEKLGGLESETDYSY---TGHKQKCDFTNRKVAAY 365

Query: 850 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 909
                        +   L + GP+SV LN+  +  Y           C+P+ + HAVLLV
Sbjct: 366 INSSVELPKDEREIAAWLAENGPISVALNAFAMQFYKKGVSHPWKIFCNPWMIDHAVLLV 425

Query: 910 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           GYG+++ IP+W ++NSWG    ++G++ ++RG+NACGI ++   A I+
Sbjct: 426 GYGERNGIPFWAIKNSWGEDYGEQGYYYLQRGSNACGINRMGSSAVIN 473



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 117/215 (54%), Gaps = 4/215 (1%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           D+WDWR      P  +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +LV+C      
Sbjct: 262 DSWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLLSLSEQELVDCDGLDQA 321

Query: 73  CDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           C G     + E   +  GLESE DY Y    G K KC +   KV  +             
Sbjct: 322 CRGGLPSNAYEAIEKLGGLESETDYSY---TGHKQKCDFTNRKVAAYINSSVELPKDERE 378

Query: 132 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 191
           +   L + GP+SV LN+  +  Y           C+P+ + HAVLLVGYG+++ IP+W +
Sbjct: 379 IAAWLAENGPISVALNAFAMQFYKKGVSHPWKIFCNPWMIDHAVLLVGYGERNGIPFWAI 438

Query: 192 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +NSWG    ++G++ ++RG+NACGI ++   A I+
Sbjct: 439 KNSWGEDYGEQGYYYLQRGSNACGINRMGSSAVIN 473



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 47/61 (77%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVLLVGYG+++ IP+W ++NSWG    ++G++ ++RG+NACGI ++   A I
Sbjct: 413  CNPWMIDHAVLLVGYGERNGIPFWAIKNSWGEDYGEQGYYYLQRGSNACGINRMGSSAVI 472

Query: 1025 D 1025
            +
Sbjct: 473  N 473


>gi|7219908|gb|AAF40479.1| cystein protease [Clonorchis sinensis]
          Length = 326

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/327 (34%), Positives = 161/327 (49%), Gaps = 29/327 (8%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     GCDG +  P 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDDGCDGGY--PP 183

Query: 813 IEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYK 869
             YT      GLE   DYPY    G    C  DKSK   +     +     +   + L  
Sbjct: 184 QTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQKLRA 240

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GPLS  LN+D +  Y G  +R   + C P  + H VL VGYG Q+  PYW+V+NSWG  
Sbjct: 241 IGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHGVLTVGYGVQNGKPYWIVKNSWGED 298

Query: 930 GPDEGFFKIERGNNACGIEQIAGYATI 956
             +EG+F+I RG+  CGI  I   A I
Sbjct: 299 FGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 158/328 (48%), Gaps = 30/328 (9%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C        GCDG   
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDD---GCDGGYP 182

Query: 447 PIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
           P  YT      GLE   DYPY    G    C  DKSK   +     +     +   + L 
Sbjct: 183 PQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQKLR 239

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GPLS  LN+  +  Y G  +R   + C P  + H VL VGYG Q+  PYW+ +NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHGVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 114/216 (52%), Gaps = 10/216 (4%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDDG 176

Query: 73  CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           CDG +  P   YT      GLE   DYPY    G    C  DKSK   +     +     
Sbjct: 177 CDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSE 231

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           +   + L   GPLS  LN+D +  Y G  +R   + C P  + H VL VGYG Q+  PYW
Sbjct: 232 KVQAQKLRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHGVLTVGYGVQNGKPYW 289

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 290 IVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 38/60 (63%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + H VL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 266  CDPAGVNHGVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325


>gi|85068708|gb|ABC69434.1| cysteine protease [Clonorchis sinensis]
 gi|85068710|gb|ABC69435.1| cysteine protease [Clonorchis sinensis]
          Length = 328

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 162/326 (49%), Gaps = 22/326 (6%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     GC G    + 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLDKGCNGGYPPKT 185

Query: 447 PIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYG 506
             E     GLE   DYPY   +G    C  ++SK   +     +     +   + L + G
Sbjct: 186 YGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNDSTVLPLSEKIQAQKLKEIG 242

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           PLS  LN+ L+ FY G  I      C+P+ L HAVL VGYG +  IPYW+ +NSWG    
Sbjct: 243 PLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIVKNSWGVGFG 302

Query: 567 DEGFFKIERGNNACGIEQIAGYATID 592
           ++G+F+I RG   CGI  +   A ID
Sbjct: 303 EKGYFRIFRGAGTCGINLVVSTAIID 328



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 164/326 (50%), Gaps = 23/326 (7%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     GC+G +   +
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLDKGCNGGYPPKT 185

Query: 813 I-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG 871
             E     GLE   DYPY   +G    C  ++SK   +     +     +   + L + G
Sbjct: 186 YGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNDSTVLPLSEKIQAQKLKEIG 242

Query: 872 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGP 931
           PLS  LN+ L+  Y G  I      C+P+ L HAVL VGYG +  IPYW+V+NSWG    
Sbjct: 243 PLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIVKNSWGVGFG 302

Query: 932 DEGFFKIERGNNACGIEQIAGYATID 957
           ++G+F+I RG   CGI  +   A ID
Sbjct: 303 EKGYFRIFRGAGTCGINLVVSTAIID 328



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 117/215 (54%), Gaps = 4/215 (1%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLDKG 176

Query: 73  CDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           C+G +   +  E     GLE   DYPY   +G    C  ++SK   +     +     + 
Sbjct: 177 CNGGYPPKTYGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNDSTVLPLSEKI 233

Query: 132 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 191
             + L + GPLS  LN+ L+  Y G  I      C+P+ L HAVL VGYG +  IPYW+V
Sbjct: 234 QAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIV 293

Query: 192 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +NSWG    ++G+F+I RG   CGI  +   A ID
Sbjct: 294 KNSWGVGFGEKGYFRIFRGAGTCGINLVVSTAIID 328



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 41/61 (67%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ L HAVL VGYG +  IPYW+V+NSWG    ++G+F+I RG   CGI  +   A I
Sbjct: 268  CNPHGLNHAVLTVGYGTEFGIPYWIVKNSWGVGFGEKGYFRIFRGAGTCGINLVVSTAII 327

Query: 1025 D 1025
            D
Sbjct: 328  D 328


>gi|195453400|ref|XP_002073772.1| GK14287 [Drosophila willistoni]
 gi|194169857|gb|EDW84758.1| GK14287 [Drosophila willistoni]
          Length = 610

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 164/318 (51%), Gaps = 29/318 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 342
           F  F +K  R+Y N  E + R   F+Q+               +YG +EF+D +  E   
Sbjct: 303 FHKFQIKFERRYVNSVERQMRLRIFRQNLRIIEQLNANEMGSAKYGITEFADMTSTEYKE 362

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +TG       ++R        +K ++     G +P  +DWR+K       +Q +CGSCWA
Sbjct: 363 RTGL------WQRTEGQPTGGQKAVVPSYPGGELPKEFDWRQKGAVSSVKNQGSCGSCWA 416

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS  G +EG  A+KTG+L EFS+ +L++C  + S C G   D   + I+     GLE E 
Sbjct: 417 FSTIGNIEGLNAVKTGQLKEFSEQELLDCDTKDSACNGGLPDNAYKAIQEI--GGLEYES 474

Query: 461 DYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
           +YPY+     K +C ++K+   +  TG   L  N    M++ L   GP+S+G+N++ + F
Sbjct: 475 EYPYK---ARKEQCHFNKTLAHVQVTGFVDLPKNNETAMQEWLIANGPISIGINANAMQF 531

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKI 573
           Y G         C   +L H VL+VGYG  D       +PYW+ +NSWGP   ++G++++
Sbjct: 532 YRGGVSHPWKILCEKSNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRV 591

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+N CG+ ++A  A +
Sbjct: 592 YRGDNTCGVSEMASSAIL 609



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 164/316 (51%), Gaps = 26/316 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 708
           F  F +K  R+Y N  E + R   F+Q+               +YG +EF+D +  E   
Sbjct: 303 FHKFQIKFERRYVNSVERQMRLRIFRQNLRIIEQLNANEMGSAKYGITEFADMTSTEYKE 362

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +TG       ++R        +K ++     G +P  +DWR+K       +Q +CGSCWA
Sbjct: 363 RTGL------WQRTEGQPTGGQKAVVPSYPGGELPKEFDWRQKGAVSSVKNQGSCGSCWA 416

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           FS  G +EG  A+KTG+L EFS+ +L++C  + S C+G   + + +   +  GLE E +Y
Sbjct: 417 FSTIGNIEGLNAVKTGQLKEFSEQELLDCDTKDSACNGGLPDNAYKAIQEIGGLEYESEY 476

Query: 828 PYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 886
           PYK     K +C ++K+   +  TG   L  N    M++ L   GP+S+ +N++ +  Y 
Sbjct: 477 PYK---ARKEQCHFNKTLAHVQVTGFVDLPKNNETAMQEWLIANGPISIGINANAMQFYR 533

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIER 940
           G         C   +L H VL+VGYG  D       +PYW+V+NSWGP   ++G++++ R
Sbjct: 534 GGVSHPWKILCEKSNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYR 593

Query: 941 GNNACGIEQIAGYATI 956
           G+N CG+ ++A  A +
Sbjct: 594 GDNTCGVSEMASSAIL 609



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 128/225 (56%), Gaps = 11/225 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P  +DWR+K       +Q  CGSCWAFS  G +EG  A+KTG+L EFS+ +L++C  
Sbjct: 388 GELPKEFDWRQKGAVSSVKNQGSCGSCWAFSTIGNIEGLNAVKTGQLKEFSEQELLDCDT 447

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHF 126
           + S C+G   + + +   +  GLE E +YPYK     K +C ++K+   +  TG   L  
Sbjct: 448 KDSACNGGLPDNAYKAIQEIGGLEYESEYPYK---ARKEQCHFNKTLAHVQVTGFVDLPK 504

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 184
           N    M++ L   GP+S+ +N++ +  Y G         C   +L H VL+VGYG  D  
Sbjct: 505 NNETAMQEWLIANGPISIGINANAMQFYRGGVSHPWKILCEKSNLDHGVLIVGYGVSDYP 564

Query: 185 ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 565 NFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMASSAIL 609


>gi|405977658|gb|EKC42097.1| Cathepsin F [Crassostrea gigas]
          Length = 715

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 155/311 (49%), Gaps = 21/311 (6%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYF---------KQDGHKKHERYGTSEFSDRSPEEIL 341
            F+ F     R Y + +E K RF+ F          QD  K    YG ++F+D S  E  
Sbjct: 417 VFQQFQAAFKRLYMSKQEEKTRFKIFCENMRKAKKLQDVEKGTAVYGVTKFADMSESEFK 476

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
              G  W +   + +   + K+ +M         +P+++DWR+        +Q +CGSCW
Sbjct: 477 QYVGKVWDQNANKGM--KKAKIPEM-------NSLPNSFDWREHGAVTEVKNQGSCGSCW 527

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKD 461
           AFS  G +EGQ+AI   KLV  S+ +LV+C K   GC G    +   E     GLE+E D
Sbjct: 528 AFSTTGNIEGQWAISKKKLVSLSEQELVDCDKVDEGCNGGLPSQAYKEIIRLGGLETETD 587

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           Y YR   G   KC+ DKSK+++         +    M   L K GP+S+G+N+  + FY 
Sbjct: 588 YKYR---GHNEKCSMDKSKIRVKINGSVSISSNETEMAAWLVKNGPISIGINAFAMQFYM 644

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
           G         C+P +L H VL+VGYG +   PYW+ +NSWGP   ++G++ + RG   CG
Sbjct: 645 GGISHPWKIFCNPKELDHGVLIVGYGVKGSKPYWIIKNSWGPDWGEKGYYLVYRGAGVCG 704

Query: 582 IEQIAGYATID 592
           +  +   A ++
Sbjct: 705 LNTMCTSAVVN 715



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 161/314 (51%), Gaps = 28/314 (8%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYF---------KQDGHKKHERYGTSEFSDRSPEEIL 707
            F+ F     R Y + +E K RF+ F          QD  K    YG ++F+D S  E  
Sbjct: 417 VFQQFQAAFKRLYMSKQEEKTRFKIFCENMRKAKKLQDVEKGTAVYGVTKFADMSESEFK 476

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
              G  W +   + +   + K+ +M         +P+++DWR+        +Q +CGSCW
Sbjct: 477 QYVGKVWDQNANKGM--KKAKIPEM-------NSLPNSFDWREHGAVTEVKNQGSCGSCW 527

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESE 824
           AFS  G +EGQ+AI   KLV  S+ +LV+C K   GC+G    PS  Y       GLE+E
Sbjct: 528 AFSTTGNIEGQWAISKKKLVSLSEQELVDCDKVDEGCNGGL--PSQAYKEIIRLGGLETE 585

Query: 825 KDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 883
            DY Y+   G   KC+ DKSK+++   G   +  N +E M   L K GP+S+ +N+  + 
Sbjct: 586 TDYKYR---GHNEKCSMDKSKIRVKINGSVSISSNETE-MAAWLVKNGPISIGINAFAMQ 641

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
            Y G         C+P +L H VL+VGYG + + PYW+++NSWGP   ++G++ + RG  
Sbjct: 642 FYMGGISHPWKIFCNPKELDHGVLIVGYGVKGSKPYWIIKNSWGPDWGEKGYYLVYRGAG 701

Query: 944 ACGIEQIAGYATID 957
            CG+  +   A ++
Sbjct: 702 VCGLNTMCTSAVVN 715



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 125/220 (56%), Gaps = 10/220 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+++DWR+        +Q  CGSCWAFS  G +EGQ+AI   KLV  S+ +LV+C K  
Sbjct: 502 LPNSFDWREHGAVTEVKNQGSCGSCWAFSTTGNIEGQWAISKKKLVSLSEQELVDCDKVD 561

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHF 126
            GC+G    PS  Y       GLE+E DY Y+   G   KC+ DKSK+++   G   +  
Sbjct: 562 EGCNGGL--PSQAYKEIIRLGGLETETDYKYR---GHNEKCSMDKSKIRVKINGSVSISS 616

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           N +E M   L K GP+S+ +N+  +  Y G         C+P +L H VL+VGYG + + 
Sbjct: 617 NETE-MAAWLVKNGPISIGINAFAMQFYMGGISHPWKIFCNPKELDHGVLIVGYGVKGSK 675

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           PYW+++NSWGP   ++G++ + RG   CG+  +   A ++
Sbjct: 676 PYWIIKNSWGPDWGEKGYYLVYRGAGVCGLNTMCTSAVVN 715


>gi|307200028|gb|EFN80374.1| Putative cysteine proteinase CG12163 [Harpegnathos saltator]
          Length = 1032

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 163/318 (51%), Gaps = 31/318 (9%)

Query: 292  FKAFIVKRGRQYANDEEIKERFEYFKQDG-----HKKHER----YGTSEFSDRSPEEILC 342
            F+ F+    R YA +EE   R   F+++       +K+E+    YG ++F+D S EE   
Sbjct: 727  FENFVNTYNRTYATEEERNLRLSIFRENLGIIRLLRKNEQGTGQYGVNQFADVSTEEFHA 786

Query: 343  -KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
               G +   RT   I   + ++         D  +P+++DWR+K    P  +Q  CGSCW
Sbjct: 787  FYLGLRPDLRTENNIPLRQAEI--------PDIELPNSFDWRQKGAVTPVKNQGMCGSCW 838

Query: 402  AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESE 459
            AFS+ G +EGQYAIK  KL+  S+ +LV+C     GC G   D   + IE     GLE E
Sbjct: 839  AFSVTGNVEGQYAIKHNKLLSLSEQELVDCDDLDEGCNGGLPDNAYRAIEKL--GGLELE 896

Query: 460  KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
             DYPY     E  +C + K+  K+  G      +    + + L   GP+S+G+N++ + F
Sbjct: 897  SDYPYE---AENERCHFKKNMAKVQVGSAVNITSNETQIAQWLVANGPISIGINANAMQF 953

Query: 520  YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKI 573
            Y G         C+P +L H VL+VGYG  +       +PYW+ +NSWG    ++G++++
Sbjct: 954  YMGGVSHPFKFLCNPKNLDHGVLIVGYGTSNYPLFHKKLPYWIVKNSWGDRWGEQGYYRV 1013

Query: 574  ERGNNACGIEQIAGYATI 591
             RG+  CG+  +A  A +
Sbjct: 1014 YRGDGTCGLNTMASSAVV 1031



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 28/316 (8%)

Query: 658  FKAFIVKRGRQYANDEEIKERFEYFKQDG-----HKKHER----YGTSEFSDRSPEEILC 708
            F+ F+    R YA +EE   R   F+++       +K+E+    YG ++F+D S EE   
Sbjct: 727  FENFVNTYNRTYATEEERNLRLSIFRENLGIIRLLRKNEQGTGQYGVNQFADVSTEEFHA 786

Query: 709  -KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
               G +   RT   I   + ++         D  +P+++DWR+K    P  +Q  CGSCW
Sbjct: 787  FYLGLRPDLRTENNIPLRQAEI--------PDIELPNSFDWRQKGAVTPVKNQGMCGSCW 838

Query: 768  AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKD 826
            AFS+ G +EGQYAIK  KL+  S+ +LV+C     GC+G   + +     +  GLE E D
Sbjct: 839  AFSVTGNVEGQYAIKHNKLLSLSEQELVDCDDLDEGCNGGLPDNAYRAIEKLGGLELESD 898

Query: 827  YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 886
            YPY+    E  +C + K+  K+  G      +    + + L   GP+S+ +N++ +  Y 
Sbjct: 899  YPYE---AENERCHFKKNMAKVQVGSAVNITSNETQIAQWLVANGPISIGINANAMQFYM 955

Query: 887  GTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIER 940
            G         C+P +L H VL+VGYG  +       +PYW+V+NSWG    ++G++++ R
Sbjct: 956  GGVSHPFKFLCNPKNLDHGVLIVGYGTSNYPLFHKKLPYWIVKNSWGDRWGEQGYYRVYR 1015

Query: 941  GNNACGIEQIAGYATI 956
            G+  CG+  +A  A +
Sbjct: 1016 GDGTCGLNTMASSAVV 1031



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 125/225 (55%), Gaps = 10/225 (4%)

Query: 8    DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
            D  +P+++DWR+K    P  +Q  CGSCWAFS+ G +EGQYAIK  KL+  S+ +LV+C 
Sbjct: 810  DIELPNSFDWRQKGAVTPVKNQGMCGSCWAFSVTGNVEGQYAIKHNKLLSLSEQELVDCD 869

Query: 68   KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
                GC+G   + +     +  GLE E DYPY+    E  +C + K+  K+  G      
Sbjct: 870  DLDEGCNGGLPDNAYRAIEKLGGLELESDYPYE---AENERCHFKKNMAKVQVGSAVNIT 926

Query: 127  NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 184
            +    + + L   GP+S+ +N++ +  Y G         C+P +L H VL+VGYG  +  
Sbjct: 927  SNETQIAQWLVANGPISIGINANAMQFYMGGVSHPFKFLCNPKNLDHGVLIVGYGTSNYP 986

Query: 185  ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                 +PYW+V+NSWG    ++G++++ RG+  CG+  +A  A +
Sbjct: 987  LFHKKLPYWIVKNSWGDRWGEQGYYRVYRGDGTCGLNTMASSAVV 1031


>gi|213513816|ref|NP_001133678.1| Cathepsin F precursor [Salmo salar]
 gi|209154908|gb|ACI33686.1| Cathepsin F precursor [Salmo salar]
          Length = 475

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 154/321 (47%), Gaps = 22/321 (6%)

Query: 282 TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEF 332
           T D   +L  FK F+V+  R Y++ E+   R   F ++     +          YG ++F
Sbjct: 167 TEDFVELLGQFKEFMVRYNRTYSSQEDTDRRLRIFHENLKTAEKLQSLDLGTAEYGVTKF 226

Query: 333 SDRSPEEILCKTGFKWSERTYERIVADREKVEK-MLMEVEKDGPVPDAWDWRKKNVTGPA 391
           SD + EE             Y   +  ++K+++ M       GP P +WDWR+     P 
Sbjct: 227 SDLTEEEF---------RTLYLNPLLSQQKLQRSMKPAAMPHGPAPPSWDWREHGAVSPV 277

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT 451
            +Q  CGSCWAFS+ G +EGQ+ +KTGKLV  S+ +LV+C      CGG           
Sbjct: 278 KNQGMCGSCWAFSVTGNIEGQWFVKTGKLVSLSEQELVDCDTADQACGGGLPSNAYEAIE 337

Query: 452 HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVG 511
              G+E+E DY Y    G+K  C +   KV  +             +   L + GP+SV 
Sbjct: 338 KLGGVETETDYSY---TGKKQSCDFTTDKVTAYINSSVELSKDENEIAAWLAENGPVSVA 394

Query: 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           LN+  + FY           C+P+ + HAVLLVGYG++   P+W  +NSWG    ++G++
Sbjct: 395 LNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGYGERQGKPFWAIKNSWGEDYGEQGYY 454

Query: 572 KIERGNNACGIEQIAGYATID 592
            + RG+  CGI  +   A ++
Sbjct: 455 YLYRGSRLCGINTMCSSAIVN 475



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 156/321 (48%), Gaps = 23/321 (7%)

Query: 648 TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEF 698
           T D   +L  FK F+V+  R Y++ E+   R   F ++     +          YG ++F
Sbjct: 167 TEDFVELLGQFKEFMVRYNRTYSSQEDTDRRLRIFHENLKTAEKLQSLDLGTAEYGVTKF 226

Query: 699 SDRSPEEILCKTGFKWSERTYERIVADREKVEK-MLMEVEKDGPVPDAWDWRKKNVTGPA 757
           SD + EE             Y   +  ++K+++ M       GP P +WDWR+     P 
Sbjct: 227 SDLTEEEF---------RTLYLNPLLSQQKLQRSMKPAAMPHGPAPPSWDWREHGAVSPV 277

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH 817
            +Q  CGSCWAFS+ G +EGQ+ +KTGKLV  S+ +LV+C      C G     + E   
Sbjct: 278 KNQGMCGSCWAFSVTGNIEGQWFVKTGKLVSLSEQELVDCDTADQACGGGLPSNAYEAIE 337

Query: 818 Q-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVL 876
           +  G+E+E DY Y    G+K  C +   KV  +             +   L + GP+SV 
Sbjct: 338 KLGGVETETDYSY---TGKKQSCDFTTDKVTAYINSSVELSKDENEIAAWLAENGPVSVA 394

Query: 877 LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFF 936
           LN+  +  Y           C+P+ + HAVLLVGYG++   P+W ++NSWG    ++G++
Sbjct: 395 LNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGYGERQGKPFWAIKNSWGEDYGEQGYY 454

Query: 937 KIERGNNACGIEQIAGYATID 957
            + RG+  CGI  +   A ++
Sbjct: 455 YLYRGSRLCGINTMCSSAIVN 475



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 4/219 (1%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           GP P +WDWR+     P  +Q  CGSCWAFS+ G +EGQ+ +KTGKLV  S+ +LV+C  
Sbjct: 260 GPAPPSWDWREHGAVSPVKNQGMCGSCWAFSVTGNIEGQWFVKTGKLVSLSEQELVDCDT 319

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
               C G     + E   +  G+E+E DY Y    G+K  C +   KV  +         
Sbjct: 320 ADQACGGGLPSNAYEAIEKLGGVETETDYSY---TGKKQSCDFTTDKVTAYINSSVELSK 376

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               +   L + GP+SV LN+  +  Y           C+P+ + HAVLLVGYG++   P
Sbjct: 377 DENEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGYGERQGKP 436

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+  CGI  +   A ++
Sbjct: 437 FWAIKNSWGEDYGEQGYYYLYRGSRLCGINTMCSSAIVN 475



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 41/61 (67%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVLLVGYG++   P+W ++NSWG    ++G++ + RG+  CGI  +   A +
Sbjct: 415  CNPWMIDHAVLLVGYGERQGKPFWAIKNSWGEDYGEQGYYYLYRGSRLCGINTMCSSAIV 474

Query: 1025 D 1025
            +
Sbjct: 475  N 475


>gi|341878608|gb|EGT34543.1| hypothetical protein CAEBREN_26318 [Caenorhabditis brenneri]
          Length = 478

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 163/315 (51%), Gaps = 18/315 (5%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 338
           +  +F  FI +  ++Y N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 172 VWNSFLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTAVYGFTKFSDMTTM 231

Query: 339 EIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E       ++W +     +  D+   EK  + + ++  +PD++DWR+        +Q +C
Sbjct: 232 EFKETMLPYQWEQP----VPMDQANFEKEGVTISEED-LPDSFDWREHGAVTQVKNQGSC 286

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLE 457
           GSCWAFS  G +EG + +   KLV  S+ +LV+C     GC G        E     GLE
Sbjct: 287 GSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCDSVDQGCNGGLPSNAYKEIIRMGGLE 346

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
            E  YPY +G GE   C   +  + ++        +    M+K L   GP+S+GLN++ +
Sbjct: 347 PEDAYPY-DGRGET--CHLVRKDIAVYINGSVELPHDEVEMQKWLVTKGPISIGLNANTL 403

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY    +      C P+ L H VL+VGYGK    PYW+ +NSWGP   + G+FK+ RG 
Sbjct: 404 QFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGEAGYFKLYRGK 463

Query: 578 NACGIEQIAGYATID 592
           N CG++++A  + ++
Sbjct: 464 NVCGVQEMATSSLVN 478



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 163/317 (51%), Gaps = 23/317 (7%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 704
           +  +F  FI +  ++Y N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 172 VWNSFLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTAVYGFTKFSDMTTM 231

Query: 705 EIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E       ++W +     +  D+   EK  + + ++  +PD++DWR+        +Q +C
Sbjct: 232 EFKETMLPYQWEQP----VPMDQANFEKEGVTISEED-LPDSFDWREHGAVTQVKNQGSC 286

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EG + +   KLV  S+ +LV+C     GC+G    PS  Y       G
Sbjct: 287 GSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCDSVDQGCNGGL--PSNAYKEIIRMGG 344

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           LE E  YPY   +G    C   +  + ++        +    M+K L   GP+S+ LN++
Sbjct: 345 LEPEDAYPY---DGRGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVTKGPISIGLNAN 401

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +  Y    +      C P+ L H VL+VGYGK    PYW+V+NSWGP   + G+FK+ R
Sbjct: 402 TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGEAGYFKLYR 461

Query: 941 GNNACGIEQIAGYATID 957
           G N CG++++A  + ++
Sbjct: 462 GKNVCGVQEMATSSLVN 478



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD++DWR+        +Q  CGSCWAFS  G +EG + +   KLV  S+ +LV+C    
Sbjct: 265 LPDSFDWREHGAVTQVKNQGSCGSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCDSVD 324

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC+G    PS  Y       GLE E  YPY   +G    C   +  + ++        +
Sbjct: 325 QGCNGGL--PSNAYKEIIRMGGLEPEDAYPY---DGRGETCHLVRKDIAVYINGSVELPH 379

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               M+K L   GP+S+ LN++ +  Y    +      C P+ L H VL+VGYGK    P
Sbjct: 380 DEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKP 439

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW+V+NSWGP   + G+FK+ RG N CG++++A  + ++
Sbjct: 440 YWIVKNSWGPTWGEAGYFKLYRGKNVCGVQEMATSSLVN 478



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P+ L H VL+VGYGK    PYW+V+NSWGP   + G+FK+ RG N CG++++A  + +
Sbjct: 418  CEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGEAGYFKLYRGKNVCGVQEMATSSLV 477

Query: 1025 D 1025
            +
Sbjct: 478  N 478


>gi|341878637|gb|EGT34572.1| hypothetical protein CAEBREN_13324 [Caenorhabditis brenneri]
          Length = 478

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 163/315 (51%), Gaps = 18/315 (5%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 338
           I  +F  FI +  ++Y N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 172 IWNSFLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTAVYGFTKFSDMTTM 231

Query: 339 EIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E       ++W +     +  D+   EK  + + ++  +PD++DWR+        +Q +C
Sbjct: 232 EFKETMLPYQWEQP----VPMDQANFEKEGVTISEED-LPDSFDWREHGAVTQVKNQGSC 286

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLE 457
           GSCWAFS  G +EG + +   KLV  S+ +LV+C     GC G        E     GLE
Sbjct: 287 GSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCDSVDQGCNGGLPSNAYKEIIRMGGLE 346

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
            E  YPY +G GE   C   +  + ++        +    M+K L   GP+S+GLN++ +
Sbjct: 347 PEDAYPY-DGRGET--CHLVRKDIAVYINGSVELPHDEVEMQKWLVTKGPISIGLNANTL 403

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY    +      C P+ L H VL+VGYGK    PYW+ +NSWGP   + G+FK+ RG 
Sbjct: 404 QFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGEAGYFKLYRGK 463

Query: 578 NACGIEQIAGYATID 592
           N CG++++A  + ++
Sbjct: 464 NVCGVQEMATSSLVN 478



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 163/317 (51%), Gaps = 23/317 (7%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 704
           I  +F  FI +  ++Y N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 172 IWNSFLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTAVYGFTKFSDMTTM 231

Query: 705 EIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E       ++W +     +  D+   EK  + + ++  +PD++DWR+        +Q +C
Sbjct: 232 EFKETMLPYQWEQP----VPMDQANFEKEGVTISEED-LPDSFDWREHGAVTQVKNQGSC 286

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EG + +   KLV  S+ +LV+C     GC+G    PS  Y       G
Sbjct: 287 GSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCDSVDQGCNGGL--PSNAYKEIIRMGG 344

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           LE E  YPY   +G    C   +  + ++        +    M+K L   GP+S+ LN++
Sbjct: 345 LEPEDAYPY---DGRGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVTKGPISIGLNAN 401

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +  Y    +      C P+ L H VL+VGYGK    PYW+V+NSWGP   + G+FK+ R
Sbjct: 402 TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGEAGYFKLYR 461

Query: 941 GNNACGIEQIAGYATID 957
           G N CG++++A  + ++
Sbjct: 462 GKNVCGVQEMATSSLVN 478



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD++DWR+        +Q  CGSCWAFS  G +EG + +   KLV  S+ +LV+C    
Sbjct: 265 LPDSFDWREHGAVTQVKNQGSCGSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCDSVD 324

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC+G    PS  Y       GLE E  YPY   +G    C   +  + ++        +
Sbjct: 325 QGCNGGL--PSNAYKEIIRMGGLEPEDAYPY---DGRGETCHLVRKDIAVYINGSVELPH 379

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               M+K L   GP+S+ LN++ +  Y    +      C P+ L H VL+VGYGK    P
Sbjct: 380 DEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKP 439

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW+V+NSWGP   + G+FK+ RG N CG++++A  + ++
Sbjct: 440 YWIVKNSWGPTWGEAGYFKLYRGKNVCGVQEMATSSLVN 478


>gi|85068706|gb|ABC69433.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/327 (34%), Positives = 161/327 (49%), Gaps = 29/327 (8%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G + GQ+  +TG L+  S  QLV+C     GCDG +  P 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRETGHLLALSGQQLVDCDYLDDGCDGGY--PP 183

Query: 813 IEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYK 869
             YT      GLE   DYPY    G    C  DKSK   +     +     +   + L  
Sbjct: 184 QTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQKLRA 240

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+V+NSWG  
Sbjct: 241 IGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGED 298

Query: 930 GPDEGFFKIERGNNACGIEQIAGYATI 956
             +EG+F+I RG+  CGI  I   A I
Sbjct: 299 FGEEGYFRIYRGDGTCGINSIVTTARI 325



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 158/328 (48%), Gaps = 30/328 (9%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G + GQ+  +TG L+  S  QLV+C     GC   DG   
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRETGHLLALSGQQLVDCDYLDDGC---DGGYP 182

Query: 447 PIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
           P  YT      GLE   DYPY    G    C  DKSK   +     +     +   + L 
Sbjct: 183 PQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQKLR 239

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GPLS  LN+  +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+ +NSWG 
Sbjct: 240 AIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGE 297

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              +EG+F+I RG+  CGI  I   A I
Sbjct: 298 DFGEEGYFRIYRGDGTCGINSIVTTARI 325



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 114/216 (52%), Gaps = 10/216 (4%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  +TG L+  S  QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRETGHLLALSGQQLVDCDYLDDG 176

Query: 73  CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           CDG +  P   YT      GLE   DYPY    G    C  DKSK   +     +     
Sbjct: 177 CDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSE 231

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           +   + L   GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PYW
Sbjct: 232 KVQAQKLRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYW 289

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 290 IVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + HAVL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 266  CDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325


>gi|223648298|gb|ACN10907.1| Cathepsin F precursor [Salmo salar]
          Length = 474

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 155/320 (48%), Gaps = 20/320 (6%)

Query: 282 TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEF 332
           + D+  +L  FK F+V+  R Y++ EE   R   F ++     +          YG ++F
Sbjct: 166 SVDSVELLGQFKEFMVRYNRTYSSQEEADRRLRVFHENLKTAEKLQSLDQGTAEYGVTKF 225

Query: 333 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 392
           SD + EE   +T +         +++ +   + M       GP P +WDWR+     P  
Sbjct: 226 SDLTEEEF--RTLY------LNPLLSQQNLQQSMKPAAMPRGPAPPSWDWREHGAVSPVK 277

Query: 393 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH 452
           +Q  CGSCWAFS+ G +EGQ+  KTGKLV  S+ +LV+C      CGG            
Sbjct: 278 NQGMCGSCWAFSVTGNIEGQWFAKTGKLVSLSEQELVDCDTVDQACGGGLPSNAYEAIEK 337

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             GLE+E DY Y    G+K  C +   KV  +             +   L + GP+SV L
Sbjct: 338 LGGLETETDYSY---TGKKQSCDFTTDKVIAYINSSVELSTDENEIAAWLAENGPVSVAL 394

Query: 513 NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           N+  + FY           C+P+ + HAVLLVGYG++   P+W  +NSWG    ++G++ 
Sbjct: 395 NAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGYGERQGKPFWAIKNSWGEDYGEQGYYY 454

Query: 573 IERGNNACGIEQIAGYATID 592
           + RG+  CGI ++   A ++
Sbjct: 455 LYRGSRLCGINKMCSSAIVN 474



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 157/320 (49%), Gaps = 21/320 (6%)

Query: 648 TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEF 698
           + D+  +L  FK F+V+  R Y++ EE   R   F ++     +          YG ++F
Sbjct: 166 SVDSVELLGQFKEFMVRYNRTYSSQEEADRRLRVFHENLKTAEKLQSLDQGTAEYGVTKF 225

Query: 699 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 758
           SD + EE   +T +         +++ +   + M       GP P +WDWR+     P  
Sbjct: 226 SDLTEEEF--RTLY------LNPLLSQQNLQQSMKPAAMPRGPAPPSWDWREHGAVSPVK 277

Query: 759 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ 818
           +Q  CGSCWAFS+ G +EGQ+  KTGKLV  S+ +LV+C      C G     + E   +
Sbjct: 278 NQGMCGSCWAFSVTGNIEGQWFAKTGKLVSLSEQELVDCDTVDQACGGGLPSNAYEAIEK 337

Query: 819 -AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             GLE+E DY Y    G+K  C +   KV  +             +   L + GP+SV L
Sbjct: 338 LGGLETETDYSY---TGKKQSCDFTTDKVIAYINSSVELSTDENEIAAWLAENGPVSVAL 394

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           N+  +  Y           C+P+ + HAVLLVGYG++   P+W ++NSWG    ++G++ 
Sbjct: 395 NAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGYGERQGKPFWAIKNSWGEDYGEQGYYY 454

Query: 938 IERGNNACGIEQIAGYATID 957
           + RG+  CGI ++   A ++
Sbjct: 455 LYRGSRLCGINKMCSSAIVN 474



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 116/219 (52%), Gaps = 4/219 (1%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           GP P +WDWR+     P  +Q  CGSCWAFS+ G +EGQ+  KTGKLV  S+ +LV+C  
Sbjct: 259 GPAPPSWDWREHGAVSPVKNQGMCGSCWAFSVTGNIEGQWFAKTGKLVSLSEQELVDCDT 318

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
               C G     + E   +  GLE+E DY Y    G+K  C +   KV  +         
Sbjct: 319 VDQACGGGLPSNAYEAIEKLGGLETETDYSY---TGKKQSCDFTTDKVIAYINSSVELST 375

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               +   L + GP+SV LN+  +  Y           C+P+ + HAVLLVGYG++   P
Sbjct: 376 DENEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGYGERQGKP 435

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+  CGI ++   A ++
Sbjct: 436 FWAIKNSWGEDYGEQGYYYLYRGSRLCGINKMCSSAIVN 474



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 42/61 (68%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVLLVGYG++   P+W ++NSWG    ++G++ + RG+  CGI ++   A +
Sbjct: 414  CNPWMIDHAVLLVGYGERQGKPFWAIKNSWGEDYGEQGYYYLYRGSRLCGINKMCSSAIV 473

Query: 1025 D 1025
            +
Sbjct: 474  N 474


>gi|46948154|gb|AAT07059.1| cathepsin F-like cysteine proteinase, partial [Brugia malayi]
          Length = 461

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 150/311 (48%), Gaps = 20/311 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGH---------KKHERYGTSEFSDRSPEEI-- 340
           F  FI K  R+Y++ EE  +RF  + Q+ +         K    YG ++FSD + EE   
Sbjct: 159 FMTFIKKFKREYSSIEEQLDRFRIYLQNMNFAKKLQFEEKGTAIYGATKFSDMTAEEFQK 218

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
           +      W       I  +       +  +      P  +DWR + V  P  DQ +CGSC
Sbjct: 219 IMLPSIWWDRVESNGITFNLNDFNLSIYNL------PSKFDWRTEGVVTPVKDQGSCGSC 272

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEK 460
           WAFS+ G +E  +AIKTGKL+  S+ +L++C     GC G   +    E     GLE E 
Sbjct: 273 WAFSVTGNIESLWAIKTGKLISLSEQELIDCDVIDKGCNGGLPINAFREIKRMGGLEPED 332

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY 520
            YPY   NG    C   ++++ +              MK  + + GPLSVG+++ L+ +Y
Sbjct: 333 QYPYEAKNG---TCHLVRAQIAVSIDDAVEIPRNETVMKAWIAQRGPLSVGIDAELLSYY 389

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
               +  +   C P  + H VL+ GYG ++++PYW  +NSWG    + G+F++ RG N C
Sbjct: 390 KSGILHPSKSRCPPSKINHGVLITGYGIENNLPYWTIKNSWGEQWGENGYFQLMRGKNIC 449

Query: 581 GIEQIAGYATI 591
           G+  +   A I
Sbjct: 450 GVSDLVSSAII 460



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 23/312 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGH---------KKHERYGTSEFSDRSPEEI-- 706
           F  FI K  R+Y++ EE  +RF  + Q+ +         K    YG ++FSD + EE   
Sbjct: 159 FMTFIKKFKREYSSIEEQLDRFRIYLQNMNFAKKLQFEEKGTAIYGATKFSDMTAEEFQK 218

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
           +      W       I  +       +  +      P  +DWR + V  P  DQ +CGSC
Sbjct: 219 IMLPSIWWDRVESNGITFNLNDFNLSIYNL------PSKFDWRTEGVVTPVKDQGSCGSC 272

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEK 825
           WAFS+ G +E  +AIKTGKL+  S+ +L++C     GC+G        E     GLE E 
Sbjct: 273 WAFSVTGNIESLWAIKTGKLISLSEQELIDCDVIDKGCNGGLPINAFREIKRMGGLEPED 332

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHD 884
            YPY+  NG    C   ++++ + +  D +    +ET MK  + + GPLSV ++++L+  
Sbjct: 333 QYPYEAKNG---TCHLVRAQIAV-SIDDAVEIPRNETVMKAWIAQRGPLSVGIDAELLSY 388

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +  +   C P  + H VL+ GYG ++N+PYW ++NSWG    + G+F++ RG N 
Sbjct: 389 YKSGILHPSKSRCPPSKINHGVLITGYGIENNLPYWTIKNSWGEQWGENGYFQLMRGKNI 448

Query: 945 CGIEQIAGYATI 956
           CG+  +   A I
Sbjct: 449 CGVSDLVSSAII 460



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 122/217 (56%), Gaps = 6/217 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR + V  P  DQ  CGSCWAFS+ G +E  +AIKTGKL+  S+ +L++C    
Sbjct: 248 LPSKFDWRTEGVVTPVKDQGSCGSCWAFSVTGNIESLWAIKTGKLISLSEQELIDCDVID 307

Query: 71  SGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G        E     GLE E  YPY+  NG    C   ++++ + +  D +    +
Sbjct: 308 KGCNGGLPINAFREIKRMGGLEPEDQYPYEAKNG---TCHLVRAQIAV-SIDDAVEIPRN 363

Query: 130 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
           ET MK  + + GPLSV ++++L+  Y    +  +   C P  + H VL+ GYG ++N+PY
Sbjct: 364 ETVMKAWIAQRGPLSVGIDAELLSYYKSGILHPSKSRCPPSKINHGVLITGYGIENNLPY 423

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W ++NSWG    + G+F++ RG N CG+  +   A I
Sbjct: 424 WTIKNSWGEQWGENGYFQLMRGKNICGVSDLVSSAII 460



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 2/88 (2%)

Query: 939  ERGNNACGI--EQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGP 996
            +RG  + GI  E ++ Y +  +  +   C P  + H VL+ GYG ++++PYW ++NSWG 
Sbjct: 373  QRGPLSVGIDAELLSYYKSGILHPSKSRCPPSKINHGVLITGYGIENNLPYWTIKNSWGE 432

Query: 997  IGPDEGFFKIERGNNACGIEQIAGYATI 1024
               + G+F++ RG N CG+  +   A I
Sbjct: 433  QWGENGYFQLMRGKNICGVSDLVSSAII 460


>gi|390994427|gb|AFM37363.1| cathepsin F1 [Dictyocaulus viviparus]
          Length = 459

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 160/314 (50%), Gaps = 26/314 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 342
           F  F+ +  + Y +  +  +RF  FK         Q+  +    YG ++FSD +PEE   
Sbjct: 157 FVDFMGRHEKVYNSKHDTLKRFRVFKRNLKAIRSWQEKEEGTAVYGITQFSDLTPEEF-- 214

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDG-----PVPDAWDWRKKNVTGPAGDQAAC 397
                  ++ Y   + D   V   ++++  +G      +P+++DWR         +Q  C
Sbjct: 215 -------KKIYLPYIWDEPIVPNRMVDLTAEGVHLNETLPESFDWRDHGAVTDVKNQGFC 267

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLE 457
           GSCWAFS  G +EGQ+ +   KLV  S+ +LV+C K   GC G    +   E     GLE
Sbjct: 268 GSCWAFSTTGNIEGQWFLAKKKLVSLSEQELVDCDKVDDGCEGGLPSQAYKEIMRMGGLE 327

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
           +E  YPY +G GE+  C  ++++  ++        +  E+MK  L K GP+S+G+N++ +
Sbjct: 328 TESAYPY-DGRGEE--CHINRTEFAVYINDSVELPHDEESMKAWLVKKGPISIGINANPL 384

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY           C PY L H VLLVGYG + + PYW+ +NSWGP   + G++++ RG 
Sbjct: 385 QFYRHGISHPWKFFCEPYMLNHGVLLVGYGSEKNKPYWIIKNSWGPKWGENGYYRLYRGK 444

Query: 578 NACGIEQIAGYATI 591
           N CG+ ++   A +
Sbjct: 445 NVCGVHEMPTSAVV 458



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 159/316 (50%), Gaps = 31/316 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 708
           F  F+ +  + Y +  +  +RF  FK         Q+  +    YG ++FSD +PEE   
Sbjct: 157 FVDFMGRHEKVYNSKHDTLKRFRVFKRNLKAIRSWQEKEEGTAVYGITQFSDLTPEEF-- 214

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDG-----PVPDAWDWRKKNVTGPAGDQAAC 763
                  ++ Y   + D   V   ++++  +G      +P+++DWR         +Q  C
Sbjct: 215 -------KKIYLPYIWDEPIVPNRMVDLTAEGVHLNETLPESFDWRDHGAVTDVKNQGFC 267

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EGQ+ +   KLV  S+ +LV+C K   GC+G    PS  Y       G
Sbjct: 268 GSCWAFSTTGNIEGQWFLAKKKLVSLSEQELVDCDKVDDGCEGGL--PSQAYKEIMRMGG 325

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           LE+E  YPY   +G   +C  ++++  ++        +  E+MK  L K GP+S+ +N++
Sbjct: 326 LETESAYPY---DGRGEECHINRTEFAVYINDSVELPHDEESMKAWLVKKGPISIGINAN 382

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +  Y           C PY L H VLLVGYG + N PYW+++NSWGP   + G++++ R
Sbjct: 383 PLQFYRHGISHPWKFFCEPYMLNHGVLLVGYGSEKNKPYWIIKNSWGPKWGENGYYRLYR 442

Query: 941 GNNACGIEQIAGYATI 956
           G N CG+ ++   A +
Sbjct: 443 GKNVCGVHEMPTSAVV 458



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 122/224 (54%), Gaps = 8/224 (3%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           V  +  +P+++DWR         +Q  CGSCWAFS  G +EGQ+ +   KLV  S+ +LV
Sbjct: 240 VHLNETLPESFDWRDHGAVTDVKNQGFCGSCWAFSTTGNIEGQWFLAKKKLVSLSEQELV 299

Query: 65  ECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 121
           +C K   GC+G    PS  Y       GLE+E  YPY   +G   +C  ++++  ++   
Sbjct: 300 DCDKVDDGCEGGL--PSQAYKEIMRMGGLETESAYPY---DGRGEECHINRTEFAVYIND 354

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
                +  E+MK  L K GP+S+ +N++ +  Y           C PY L H VLLVGYG
Sbjct: 355 SVELPHDEESMKAWLVKKGPISIGINANPLQFYRHGISHPWKFFCEPYMLNHGVLLVGYG 414

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            + N PYW+++NSWGP   + G++++ RG N CG+ ++   A +
Sbjct: 415 SEKNKPYWIIKNSWGPKWGENGYYRLYRGKNVCGVHEMPTSAVV 458


>gi|195497262|ref|XP_002096026.1| GE25302 [Drosophila yakuba]
 gi|194182127|gb|EDW95738.1| GE25302 [Drosophila yakuba]
          Length = 615

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 166/318 (52%), Gaps = 30/318 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 342
           F  F V+ GR+Y +  E + R   F+Q+               +YG +EF+D +  E   
Sbjct: 309 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEQLNVNEMGSAKYGITEFADMTSSEYKE 368

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +TG  W +R   +       V          G +P  +DWR+KN      +Q +CGSCWA
Sbjct: 369 RTGL-W-QRNEAKATGGSVAVVPAY-----HGELPKEFDWRQKNAVTQVKNQGSCGSCWA 421

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS+ G +EG +A+KTG L EFS+ +L++C    S C G   D   + I+     GLE E 
Sbjct: 422 FSVTGNIEGLHAVKTGDLKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDI--GGLEYEA 479

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHF 519
           +YPY+    +K +C ++++   +          G+ET M++ L   GP+S+G+N++ + F
Sbjct: 480 EYPYK---AKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLTNGPISIGINANAMQF 536

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKI 573
           Y G         CS  +L H VL+VGYG  +       +PYW+ +NSWGP   ++G++++
Sbjct: 537 YRGGVSHPWKALCSKKNLDHGVLVVGYGVSEYPNFHKTLPYWIVKNSWGPRWGEQGYYRV 596

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+N CG+ ++A  A +
Sbjct: 597 YRGDNTCGVSEMATSAVL 614



 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 165/316 (52%), Gaps = 27/316 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 708
           F  F V+ GR+Y +  E + R   F+Q+               +YG +EF+D +  E   
Sbjct: 309 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEQLNVNEMGSAKYGITEFADMTSSEYKE 368

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +TG  W +R   +       V          G +P  +DWR+KN      +Q +CGSCWA
Sbjct: 369 RTGL-W-QRNEAKATGGSVAVVPAY-----HGELPKEFDWRQKNAVTQVKNQGSCGSCWA 421

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           FS+ G +EG +A+KTG L EFS+ +L++C    S C+G   + + +      GLE E +Y
Sbjct: 422 FSVTGNIEGLHAVKTGDLKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEY 481

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYN 886
           PYK    +K +C ++++   +          G+ET M++ L   GP+S+ +N++ +  Y 
Sbjct: 482 PYK---AKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLTNGPISIGINANAMQFYR 538

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIER 940
           G         CS  +L H VL+VGYG  +       +PYW+V+NSWGP   ++G++++ R
Sbjct: 539 GGVSHPWKALCSKKNLDHGVLVVGYGVSEYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYR 598

Query: 941 GNNACGIEQIAGYATI 956
           G+N CG+ ++A  A +
Sbjct: 599 GDNTCGVSEMATSAVL 614



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 130/225 (57%), Gaps = 11/225 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P  +DWR+KN      +Q  CGSCWAFS+ G +EG +A+KTG L EFS+ +L++C  
Sbjct: 393 GELPKEFDWRQKNAVTQVKNQGSCGSCWAFSVTGNIEGLHAVKTGDLKEFSEQELLDCDT 452

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             S C+G   + + +      GLE E +YPYK    +K +C ++++   +          
Sbjct: 453 TDSACNGGLMDNAYKAIKDIGGLEYEAEYPYK---AKKNQCHFNRTLSHVQVAGFVDLPK 509

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 184
           G+ET M++ L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  +  
Sbjct: 510 GNETAMQEWLLTNGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSEYP 569

Query: 185 ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 570 NFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 614


>gi|85068700|gb|ABC69430.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/326 (35%), Positives = 161/326 (49%), Gaps = 27/326 (8%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFF-EP 811
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+  LV+C     GCDG +  + 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQPLVDCDYLDGGCDGGYPPQT 185

Query: 812 SIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILYKY 870
           +       GLE   DYPY    G    C  DKSK V    G   L  +     +K L   
Sbjct: 186 NTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSEKVQAQK-LRAI 241

Query: 871 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           GPLS  LN+D +  Y G  +R     C P  + HAVL VGYG Q+  PYW+V+NSWG   
Sbjct: 242 GPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDF 299

Query: 931 PDEGFFKIERGNNACGIEQIAGYATI 956
            +EG+F+I RG+  CGI  I   A I
Sbjct: 300 GEEGYFRIYRGDGTCGINSIVTTARI 325



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 154/325 (47%), Gaps = 24/325 (7%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+  LV+C     GC G    + 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQPLVDCDYLDGGCDGGYPPQT 185

Query: 447 PIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYG 506
                   GLE   DYPY    G    C  DKSK   +     +     +   + L   G
Sbjct: 186 NTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSEKVQAQKLRAIG 242

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           PLS  LN+  +  Y G  +R     C P  + HAVL VGYG Q+  PYW+ +NSWG    
Sbjct: 243 PLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFG 300

Query: 567 DEGFFKIERGNNACGIEQIAGYATI 591
           +EG+F+I RG+  CGI  I   A I
Sbjct: 301 EEGYFRIYRGDGTCGINSIVTTARI 325



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 114/215 (53%), Gaps = 8/215 (3%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+  LV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQPLVDCDYLDGG 176

Query: 73  CDGCFF-EPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSE 130
           CDG +  + +       GLE   DYPY    G    C  DKSK V    G   L  +   
Sbjct: 177 CDGGYPPQTNTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVAYINGSTILPLSEKV 233

Query: 131 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 190
             +K L   GPLS  LN+D +  Y G  +R     C P  + HAVL VGYG Q+  PYW+
Sbjct: 234 QAQK-LRAIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVLTVGYGVQNGKPYWI 290

Query: 191 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 291 VKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + HAVL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 266  CDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325


>gi|348528696|ref|XP_003451852.1| PREDICTED: cathepsin F-like [Oreochromis niloticus]
          Length = 475

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 152/315 (48%), Gaps = 22/315 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +L  FK F+ K  + Y++ EE+  R   F ++     +          YG ++FSD + E
Sbjct: 173 LLGQFKEFMTKYNKVYSSQEEVDRRLRIFHENLKTAEKLQALDQGSAEYGVTKFSDLTEE 232

Query: 339 EILCKTGFKWSERTYERIVADREKVEK-MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E            TY   +  +  + + M       GP PD+WDWR      P  +Q  C
Sbjct: 233 EF---------RSTYLNPLLSQWTLHQPMKPATPAKGPSPDSWDWRDHGAVSPVKNQGMC 283

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLE 457
           GSCWAFS+ G +EGQ+ +K G L+  S+ +LV+C      C G              GLE
Sbjct: 284 GSCWAFSVIGNIEGQWFLKNGTLLSLSEQELVDCDGLDQACRGGLPSNAYEAIEKLGGLE 343

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
           +E DY Y    G K +C +   KV  +           + +   L + GP+SV LN+  +
Sbjct: 344 TESDYSY---TGHKQRCDFTTGKVAAYINSSVELPKDEKEIAAWLAENGPVSVALNAFAM 400

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY           C+P+ + HAVLLVGYG++  IP+W  +NSWG    ++G++ + RG+
Sbjct: 401 QFYRKGISHPLKIFCNPWMIDHAVLLVGYGERKGIPFWAIKNSWGEDYGEQGYYYLYRGS 460

Query: 578 NACGIEQIAGYATID 592
           NACGI ++   A ++
Sbjct: 461 NACGINKMCSSAVVN 475



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 155/315 (49%), Gaps = 23/315 (7%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +L  FK F+ K  + Y++ EE+  R   F ++     +          YG ++FSD + E
Sbjct: 173 LLGQFKEFMTKYNKVYSSQEEVDRRLRIFHENLKTAEKLQALDQGSAEYGVTKFSDLTEE 232

Query: 705 EILCKTGFKWSERTYERIVADREKVEK-MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E            TY   +  +  + + M       GP PD+WDWR      P  +Q  C
Sbjct: 233 EF---------RSTYLNPLLSQWTLHQPMKPATPAKGPSPDSWDWRDHGAVSPVKNQGMC 283

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLE 822
           GSCWAFS+ G +EGQ+ +K G L+  S+ +LV+C      C G     + E   +  GLE
Sbjct: 284 GSCWAFSVIGNIEGQWFLKNGTLLSLSEQELVDCDGLDQACRGGLPSNAYEAIEKLGGLE 343

Query: 823 SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 882
           +E DY Y    G K +C +   KV  +           + +   L + GP+SV LN+  +
Sbjct: 344 TESDYSY---TGHKQRCDFTTGKVAAYINSSVELPKDEKEIAAWLAENGPVSVALNAFAM 400

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y           C+P+ + HAVLLVGYG++  IP+W ++NSWG    ++G++ + RG+
Sbjct: 401 QFYRKGISHPLKIFCNPWMIDHAVLLVGYGERKGIPFWAIKNSWGEDYGEQGYYYLYRGS 460

Query: 943 NACGIEQIAGYATID 957
           NACGI ++   A ++
Sbjct: 461 NACGINKMCSSAVVN 475



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 119/219 (54%), Gaps = 4/219 (1%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           GP PD+WDWR      P  +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +LV+C  
Sbjct: 260 GPSPDSWDWRDHGAVSPVKNQGMCGSCWAFSVIGNIEGQWFLKNGTLLSLSEQELVDCDG 319

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
               C G     + E   +  GLE+E DY Y    G K +C +   KV  +         
Sbjct: 320 LDQACRGGLPSNAYEAIEKLGGLETESDYSY---TGHKQRCDFTTGKVAAYINSSVELPK 376

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L + GP+SV LN+  +  Y           C+P+ + HAVLLVGYG++  IP
Sbjct: 377 DEKEIAAWLAENGPVSVALNAFAMQFYRKGISHPLKIFCNPWMIDHAVLLVGYGERKGIP 436

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 437 FWAIKNSWGEDYGEQGYYYLYRGSNACGINKMCSSAVVN 475



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 45/61 (73%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVLLVGYG++  IP+W ++NSWG    ++G++ + RG+NACGI ++   A +
Sbjct: 415  CNPWMIDHAVLLVGYGERKGIPFWAIKNSWGEDYGEQGYYYLYRGSNACGINKMCSSAVV 474

Query: 1025 D 1025
            +
Sbjct: 475  N 475


>gi|12597541|ref|NP_075125.1| cathepsin [Helicoverpa armigera nucleopolyhedrovirus G4]
 gi|15426394|ref|NP_203611.1| cathepsin [Helicoverpa armigera NPV]
 gi|12483807|gb|AAG53799.1|AF271059_56 cathepsin [Helicoverpa armigera nucleopolyhedrovirus G4]
 gi|15384470|gb|AAK96381.1|AF303045_123 cathepsin [Helicoverpa armigera NPV]
 gi|18027090|gb|AAL55725.1|AF268612_1 cathepsin [Helicoverpa armigera NPV]
          Length = 365

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 169/325 (52%), Gaps = 42/325 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------------------YGTSE 697
           FK F+ +  + Y + +E + R+  FK + +K + +                    +G ++
Sbjct: 55  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 114

Query: 698 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNV 753
           FSD++P+E+L   TGF  +   +  +  +R         + K  P   +PD +DWR  N 
Sbjct: 115 FSDKTPDEVLHSNTGFFLNLSQHYTLCENR---------IVKGAPNIRLPDYYDWRDTNK 165

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI 813
             P  DQ  CGSCWAF   G +E QYAI+  KL++ S+ QL++C +   GC+G     + 
Sbjct: 166 VTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEVDLGCNGGLMHLAF 225

Query: 814 -EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSETMKKILYKYG 871
            E     G+E+E DYPY+   G +  C  D  K+ +     F +       +K+++Y  G
Sbjct: 226 QELLLMGGVETEADYPYQ---GSEQMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTG 282

Query: 872 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGP 931
           P+++ +++  I +Y    + +    C  YDL HAVLL+G+G ++N+PYW+++NSWG    
Sbjct: 283 PVAIAVDAMDIINYRRGILNQ----CHIYDLNHAVLLIGWGIENNVPYWIIKNSWGEDWG 338

Query: 932 DEGFFKIERGNNACGIEQIAGYATI 956
           + G+ ++ R  NACG+    G +++
Sbjct: 339 ENGYLRVRRNVNACGLLNEFGASSV 363



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 167/327 (51%), Gaps = 45/327 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------------------YGTSE 331
           FK F+ +  + Y + +E + R+  FK + +K + +                    +G ++
Sbjct: 55  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 114

Query: 332 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNV 387
           FSD++P+E+L   TGF  +   +  +  +R         + K  P   +PD +DWR  N 
Sbjct: 115 FSDKTPDEVLHSNTGFFLNLSQHYTLCENR---------IVKGAPNIRLPDYYDWRDTNK 165

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQP 447
             P  DQ  CGSCWAF   G +E QYAI+  KL++ S+ QL++C +   GC G  GL   
Sbjct: 166 VTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEVDLGCNG--GLMHL 223

Query: 448 I--EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGSETMKKILYK 504
              E     G+E+E DYPY+   G +  C  D  K+ +     F Y       +K+++Y 
Sbjct: 224 AFQELLLMGGVETEADYPYQ---GSEQMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYT 280

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPI 564
            GP+++ +++  I  Y    + +    C  YDL HAVLL+G+G ++++PYW+ +NSWG  
Sbjct: 281 TGPVAIAVDAMDIINYRRGILNQ----CHIYDLNHAVLLIGWGIENNVPYWIIKNSWGED 336

Query: 565 GPDEGFFKIERGNNACGIEQIAGYATI 591
             + G+ ++ R  NACG+    G +++
Sbjct: 337 WGENGYLRVRRNVNACGLLNEFGASSV 363



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 124/217 (57%), Gaps = 9/217 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR  N   P  DQ  CGSCWAF   G +E QYAI+  KL++ S+ QL++C +  
Sbjct: 154 LPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEVD 213

Query: 71  SGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNG 128
            GC+G     +  E     G+E+E DYPY+   G +  C  D  K+ +     F +    
Sbjct: 214 LGCNGGLMHLAFQELLLMGGVETEADYPYQ---GSEQMCTLDNRKIAVKLNSCFKYDIRD 270

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
              +K+++Y  GP+++ +++  I +Y    + +    C  YDL HAVLL+G+G ++N+PY
Sbjct: 271 ENKLKELVYTTGPVAIAVDAMDIINYRRGILNQ----CHIYDLNHAVLLIGWGIENNVPY 326

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+++NSWG    + G+ ++ R  NACG+    G +++
Sbjct: 327 WIIKNSWGEDWGENGYLRVRRNVNACGLLNEFGASSV 363



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 42/60 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C  YDL HAVLL+G+G ++++PYW+++NSWG    + G+ ++ R  NACG+    G +++
Sbjct: 304  CHIYDLNHAVLLIGWGIENNVPYWIIKNSWGEDWGENGYLRVRRNVNACGLLNEFGASSV 363


>gi|344310882|gb|AEN03980.1| cathepsin-like cysteine proteinase [Helicoverpa armigera NPV strain
           Australia]
          Length = 367

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 169/325 (52%), Gaps = 42/325 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------------------YGTSE 697
           FK F+ +  + Y + +E + R+  FK + +K + +                    +G ++
Sbjct: 57  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 116

Query: 698 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNV 753
           FSD++P+E+L   TGF  +   +  +  +R         + K  P   +PD +DWR  N 
Sbjct: 117 FSDKTPDEVLHSNTGFFLNLSQHYTLCENR---------IVKGAPNIRLPDYYDWRDTNK 167

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI 813
             P  DQ  CGSCWAF   G +E QYAI+  KL++ S+ QL++C +   GC+G     + 
Sbjct: 168 VTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEVDLGCNGGLMHLAF 227

Query: 814 -EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSETMKKILYKYG 871
            E     G+E+E DYPY+   G +  C  D  K+ +     F +       +K+++Y  G
Sbjct: 228 QELLLMGGVETEADYPYQ---GSEQMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTG 284

Query: 872 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGP 931
           P+++ +++  I +Y    + +    C  YDL HAVLL+G+G ++N+PYW+++NSWG    
Sbjct: 285 PVAIAVDAMDIINYRRGILNQ----CHIYDLNHAVLLIGWGIENNVPYWIIKNSWGEDWG 340

Query: 932 DEGFFKIERGNNACGIEQIAGYATI 956
           + G+ ++ R  NACG+    G +++
Sbjct: 341 ENGYLRVRRNVNACGLLNEFGASSV 365



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 167/327 (51%), Gaps = 45/327 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------------------YGTSE 331
           FK F+ +  + Y + +E + R+  FK + +K + +                    +G ++
Sbjct: 57  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 116

Query: 332 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNV 387
           FSD++P+E+L   TGF  +   +  +  +R         + K  P   +PD +DWR  N 
Sbjct: 117 FSDKTPDEVLHSNTGFFLNLSQHYTLCENR---------IVKGAPNIRLPDYYDWRDTNK 167

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQP 447
             P  DQ  CGSCWAF   G +E QYAI+  KL++ S+ QL++C +   GC G  GL   
Sbjct: 168 VTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEVDLGCNG--GLMHL 225

Query: 448 I--EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGSETMKKILYK 504
              E     G+E+E DYPY+   G +  C  D  K+ +     F Y       +K+++Y 
Sbjct: 226 AFQELLLMGGVETEADYPYQ---GSEQMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYT 282

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPI 564
            GP+++ +++  I  Y    + +    C  YDL HAVLL+G+G ++++PYW+ +NSWG  
Sbjct: 283 TGPVAIAVDAMDIINYRRGILNQ----CHIYDLNHAVLLIGWGIENNVPYWIIKNSWGED 338

Query: 565 GPDEGFFKIERGNNACGIEQIAGYATI 591
             + G+ ++ R  NACG+    G +++
Sbjct: 339 WGENGYLRVRRNVNACGLLNEFGASSV 365



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 124/217 (57%), Gaps = 9/217 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR  N   P  DQ  CGSCWAF   G +E QYAI+  KL++ S+ QL++C +  
Sbjct: 156 LPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEVD 215

Query: 71  SGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNG 128
            GC+G     +  E     G+E+E DYPY+   G +  C  D  K+ +     F +    
Sbjct: 216 LGCNGGLMHLAFQELLLMGGVETEADYPYQ---GSEQMCTLDNRKIAVKLNSCFKYDIRD 272

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
              +K+++Y  GP+++ +++  I +Y    + +    C  YDL HAVLL+G+G ++N+PY
Sbjct: 273 ENKLKELVYTTGPVAIAVDAMDIINYRRGILNQ----CHIYDLNHAVLLIGWGIENNVPY 328

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+++NSWG    + G+ ++ R  NACG+    G +++
Sbjct: 329 WIIKNSWGEDWGENGYLRVRRNVNACGLLNEFGASSV 365



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 42/60 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C  YDL HAVLL+G+G ++++PYW+++NSWG    + G+ ++ R  NACG+    G +++
Sbjct: 306  CHIYDLNHAVLLIGWGIENNVPYWIIKNSWGEDWGENGYLRVRRNVNACGLLNEFGASSV 365


>gi|432091081|gb|ELK24293.1| Cathepsin F, partial [Myotis davidii]
          Length = 410

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 149/310 (48%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           FK FI    R Y  +EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 113 FKYFITTYNRTYETEEEAQWRMSVFINNMIRAQKIQALDRGTAQYGVTKFSDLTEEEF-- 170

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                     Y   +   E  +KM +      P P  WDWRKK       +Q  CGSCWA
Sbjct: 171 -------RTMYLNPLLKEELGKKMRLVKFVGDPAPPEWDWRKKGAVTKVKNQGMCGSCWA 223

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           FS+ G +EGQ+ +K G L+  S+ +LV+C K    C G              GLE+E DY
Sbjct: 224 FSVTGNVEGQWFLKRGDLLSLSEQELVDCDKVDKACMGGLPSNAYSAIKTLGGLETEDDY 283

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
            Y   +G    C++   K K++        +  + +   L K GP+S+ +N+  + FY  
Sbjct: 284 SY---SGHLQTCSFSAQKAKVYINDSVELSHNEQELAAWLAKNGPISIAINAFGMQFYRH 340

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
              R     CS + + HAVLLVGYG + D+P+W  +NSWG    +EG++ + RG+ ACG+
Sbjct: 341 GISRPLRPLCSRWFIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEEGYYYLHRGSGACGV 400

Query: 583 EQIAGYATID 592
             +A  A ++
Sbjct: 401 NVMASSAVVN 410



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 153/312 (49%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           FK FI    R Y  +EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 113 FKYFITTYNRTYETEEEAQWRMSVFINNMIRAQKIQALDRGTAQYGVTKFSDLTEEEF-- 170

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                     Y   +   E  +KM +      P P  WDWRKK       +Q  CGSCWA
Sbjct: 171 -------RTMYLNPLLKEELGKKMRLVKFVGDPAPPEWDWRKKGAVTKVKNQGMCGSCWA 223

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QAGLESEK 825
           FS+ G +EGQ+ +K G L+  S+ +LV+C K    C G    PS  Y+      GLE+E 
Sbjct: 224 FSVTGNVEGQWFLKRGDLLSLSEQELVDCDKVDKACMGGL--PSNAYSAIKTLGGLETED 281

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DY Y   +G    C++   K K++        +  + +   L K GP+S+ +N+  +  Y
Sbjct: 282 DYSY---SGHLQTCSFSAQKAKVYINDSVELSHNEQELAAWLAKNGPISIAINAFGMQFY 338

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                R     CS + + HAVLLVGYG + ++P+W ++NSWG    +EG++ + RG+ AC
Sbjct: 339 RHGISRPLRPLCSRWFIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEEGYYYLHRGSGAC 398

Query: 946 GIEQIAGYATID 957
           G+  +A  A ++
Sbjct: 399 GVNVMASSAVVN 410



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 120/220 (54%), Gaps = 8/220 (3%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P P  WDWRKK       +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +LV+C K 
Sbjct: 196 PAPPEWDWRKKGAVTKVKNQGMCGSCWAFSVTGNVEGQWFLKRGDLLSLSEQELVDCDKV 255

Query: 70  CSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
              C G    PS  Y+      GLE+E DY Y   +G    C++   K K++        
Sbjct: 256 DKACMGGL--PSNAYSAIKTLGGLETEDDYSY---SGHLQTCSFSAQKAKVYINDSVELS 310

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           +  + +   L K GP+S+ +N+  +  Y     R     CS + + HAVLLVGYG + ++
Sbjct: 311 HNEQELAAWLAKNGPISIAINAFGMQFYRHGISRPLRPLCSRWFIDHAVLLVGYGNRSDV 370

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           P+W ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 371 PFWAIKNSWGTDWGEEGYYYLHRGSGACGVNVMASSAVVN 410



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CS + + HAVLLVGYG + D+P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 350  CSRWFIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNVMASSAVV 409

Query: 1025 D 1025
            +
Sbjct: 410  N 410


>gi|395851695|ref|XP_003798388.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Otolemur garnettii]
          Length = 491

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 166/337 (49%), Gaps = 22/337 (6%)

Query: 266 DQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 324
           +Q ++ V +L  +G L+ D +  +L  FK F+    R Y + EE + R   F  +  +  
Sbjct: 167 NQTLSSVISLLNKGPLSKDFSMQMLSVFKNFLTTYNRTYESKEETQWRLSIFINNMVRAQ 226

Query: 325 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
           +         RYG ++FSD + EE             Y   +   +  +KM +      P
Sbjct: 227 KIQALDQGTARYGITKFSDLTEEEF---------RTIYLNPLLREDPGKKMRVAKPVGDP 277

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            P  WDWR K       +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K  
Sbjct: 278 APPEWDWRNKGAVTNVKNQGMCGSCWAFSVTGNVEGQWFLKQGTLLSLSEQELLDCDKMD 337

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
             C G           +  GLE+E+DY Y+   G+   C +   K K++        +  
Sbjct: 338 KACLGGLPSNAYSAIKNLGGLETEEDYSYQ---GQMQACNFSAEKAKVYINDSVELSHNE 394

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           + +   L K GP+SV +N+  + FY     R     C+P+ + HAVL+VGYG + DIP+W
Sbjct: 395 QKLAAWLAKKGPISVAINAFGMQFYRHGISRPLRPLCTPWLIDHAVLIVGYGNRSDIPFW 454

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
             +NSWG    ++G++ + RG+ ACG+  +A  A ++
Sbjct: 455 AIKNSWGTDWGEQGYYYLHRGSGACGVNTMASSAVVE 491



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 170/339 (50%), Gaps = 27/339 (7%)

Query: 632 DQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 690
           +Q ++ V +L  +G L+ D +  +L  FK F+    R Y + EE + R   F  +  +  
Sbjct: 167 NQTLSSVISLLNKGPLSKDFSMQMLSVFKNFLTTYNRTYESKEETQWRLSIFINNMVRAQ 226

Query: 691 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
           +         RYG ++FSD + EE             Y   +   +  +KM +      P
Sbjct: 227 KIQALDQGTARYGITKFSDLTEEEF---------RTIYLNPLLREDPGKKMRVAKPVGDP 277

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            P  WDWR K       +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K  
Sbjct: 278 APPEWDWRNKGAVTNVKNQGMCGSCWAFSVTGNVEGQWFLKQGTLLSLSEQELLDCDKMD 337

Query: 802 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
             C G    PS  Y+   +  GLE+E+DY Y+   G+   C +   K K++        +
Sbjct: 338 KACLGGL--PSNAYSAIKNLGGLETEEDYSYQ---GQMQACNFSAEKAKVYINDSVELSH 392

Query: 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
             + +   L K GP+SV +N+  +  Y     R     C+P+ + HAVL+VGYG + +IP
Sbjct: 393 NEQKLAAWLAKKGPISVAINAFGMQFYRHGISRPLRPLCTPWLIDHAVLIVGYGNRSDIP 452

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A ++
Sbjct: 453 FWAIKNSWGTDWGEQGYYYLHRGSGACGVNTMASSAVVE 491



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 122/220 (55%), Gaps = 8/220 (3%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P P  WDWR K       +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K 
Sbjct: 277 PAPPEWDWRNKGAVTNVKNQGMCGSCWAFSVTGNVEGQWFLKQGTLLSLSEQELLDCDKM 336

Query: 70  CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
              C G    PS  Y+   +  GLE+E+DY Y+   G+   C +   K K++        
Sbjct: 337 DKACLGGL--PSNAYSAIKNLGGLETEEDYSYQ---GQMQACNFSAEKAKVYINDSVELS 391

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           +  + +   L K GP+SV +N+  +  Y     R     C+P+ + HAVL+VGYG + +I
Sbjct: 392 HNEQKLAAWLAKKGPISVAINAFGMQFYRHGISRPLRPLCTPWLIDHAVLIVGYGNRSDI 451

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           P+W ++NSWG    ++G++ + RG+ ACG+  +A  A ++
Sbjct: 452 PFWAIKNSWGTDWGEQGYYYLHRGSGACGVNTMASSAVVE 491



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVL+VGYG + DIP+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 431  CTPWLIDHAVLIVGYGNRSDIPFWAIKNSWGTDWGEQGYYYLHRGSGACGVNTMASSAVV 490

Query: 1025 D 1025
            +
Sbjct: 491  E 491


>gi|285002340|ref|YP_003422404.1| cathepsin [Pseudaletia unipuncta granulovirus]
 gi|197343600|gb|ACH69415.1| cathepsin [Pseudaletia unipuncta granulovirus]
          Length = 338

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 172/339 (50%), Gaps = 29/339 (8%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 692
           ++A    ++   +L +D  N    F  F+ K G+ YAND E K RF+ FK +    +ER 
Sbjct: 13  LLATTPIVSSMNNLQYDLSNSEVLFDEFVTKYGKVYANDAERKSRFDVFKANLAIINERN 72

Query: 693 -------YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGP--- 741
                  +G + +SD S  E+L K TGFK +         D EK  K        GP   
Sbjct: 73  AQEESATFGINFYSDLSSNELLRKQTGFKTALHN------DNEKKSKYCTRRVITGPSTR 126

Query: 742 -VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
            +P+A++WR  +       Q  CGSCWAFS    +E QY IK  + V+ S+ Q+V+C   
Sbjct: 127 LLPEAFNWRDSDAVTSVKQQRDCGSCWAFSAVANIESQYYIKNKQYVDLSEQQIVDCDPI 186

Query: 801 CSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 859
            +GC+G     ++EY  ++ G++ E+DY Y    G +  C  + + V   +G        
Sbjct: 187 NNGCNGGLMSWAMEYVMRSGGVQLEEDYQYV---GNEGVCKNNSANVVQISGCVSYDLRN 243

Query: 860 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS-PYDLGHAVLLVGYGKQDNIP 918
            E ++++L   GP+SV ++   + +Y     +     CS  + L HAVLLVGYG Q+N P
Sbjct: 244 EERLRELLVSNGPISVAIDVMDVTNYQSGIAKH----CSVAHGLNHAVLLVGYGVQNNTP 299

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 956
           YW+ +NSWG    + G+F++ R  N+CG + Q A  A +
Sbjct: 300 YWVFKNSWGSDWGENGYFRVLRDVNSCGMLNQYAATAIL 338



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 171/341 (50%), Gaps = 32/341 (9%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 326
           ++A    ++   +L +D  N    F  F+ K G+ YAND E K RF+ FK +    +ER 
Sbjct: 13  LLATTPIVSSMNNLQYDLSNSEVLFDEFVTKYGKVYANDAERKSRFDVFKANLAIINERN 72

Query: 327 -------YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGP--- 375
                  +G + +SD S  E+L K TGFK +         D EK  K        GP   
Sbjct: 73  AQEESATFGINFYSDLSSNELLRKQTGFKTALHN------DNEKKSKYCTRRVITGPSTR 126

Query: 376 -VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
            +P+A++WR  +       Q  CGSCWAFS    +E QY IK  + V+ S+ Q+V+C   
Sbjct: 127 LLPEAFNWRDSDAVTSVKQQRDCGSCWAFSAVANIESQYYIKNKQYVDLSEQQIVDCDPI 186

Query: 435 CSGCGGCDGLEQ-PIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            +GC G  GL    +EY  ++ G++ E+DY Y    G +  C  + + V   +G      
Sbjct: 187 NNGCNG--GLMSWAMEYVMRSGGVQLEEDYQYV---GNEGVCKNNSANVVQISGCVSYDL 241

Query: 493 NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCS-PYDLGHAVLLVGYGKQDD 551
              E ++++L   GP+SV ++   +  Y     +     CS  + L HAVLLVGYG Q++
Sbjct: 242 RNEERLRELLVSNGPISVAIDVMDVTNYQSGIAKH----CSVAHGLNHAVLLVGYGVQNN 297

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 591
            PYW+ +NSWG    + G+F++ R  N+CG + Q A  A +
Sbjct: 298 TPYWVFKNSWGSDWGENGYFRVLRDVNSCGMLNQYAATAIL 338



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 10/218 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+A++WR  +       Q DCGSCWAFS    +E QY IK  + V+ S+ Q+V+C    
Sbjct: 128 LPEAFNWRDSDAVTSVKQQRDCGSCWAFSAVANIESQYYIKNKQYVDLSEQQIVDCDPIN 187

Query: 71  SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           +GC+G     ++EY  ++ G++ E+DY Y    G +  C  + + V   +G         
Sbjct: 188 NGCNGGLMSWAMEYVMRSGGVQLEEDYQYV---GNEGVCKNNSANVVQISGCVSYDLRNE 244

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS-PYDLGHAVLLVGYGKQDNIPY 188
           E ++++L   GP+SV ++   + +Y     +     CS  + L HAVLLVGYG Q+N PY
Sbjct: 245 ERLRELLVSNGPISVAIDVMDVTNYQSGIAKH----CSVAHGLNHAVLLVGYGVQNNTPY 300

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
           W+ +NSWG    + G+F++ R  N+CG + Q A  A +
Sbjct: 301 WVFKNSWGSDWGENGYFRVLRDVNSCGMLNQYAATAIL 338



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 2/62 (3%)

Query: 965  CS-PYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYA 1022
            CS  + L HAVLLVGYG Q++ PYW+ +NSWG    + G+F++ R  N+CG + Q A  A
Sbjct: 277  CSVAHGLNHAVLLVGYGVQNNTPYWVFKNSWGSDWGENGYFRVLRDVNSCGMLNQYAATA 336

Query: 1023 TI 1024
             +
Sbjct: 337  IL 338


>gi|85068712|gb|ABC69436.1| cysteine protease [Clonorchis sinensis]
          Length = 328

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 162/326 (49%), Gaps = 22/326 (6%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 326
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FSD + EE   KT +         +  D    E + M+ EK       +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF--KTRYLRMRFDGPIVSEDPSPEEDVTMDNEK-------FDWREHG 125

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
             GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     GC G    + 
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLEKGCNGGYPPKT 185

Query: 447 PIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYG 506
             E     GLE   DYPY   +G    C  ++SK   +     +     +   + L + G
Sbjct: 186 YGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNDSTVLPLSEKIQAQKLKEIG 242

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           PLS  LN+ L+ FY G  I      C+P+ L HAVL VGYG +  IPYW+ +NS G    
Sbjct: 243 PLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIVKNSLGVGFG 302

Query: 567 DEGFFKIERGNNACGIEQIAGYATID 592
           ++G+F+I RG   CGI  +   A ID
Sbjct: 303 EKGYFRIFRGAGTCGINLVVSTAIID 328



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 164/326 (50%), Gaps = 23/326 (7%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 692
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FSD + EE   KT +         +  D    E + M+ EK       +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF--KTRYLRMRFDGPIVSEDPSPEEDVTMDNEK-------FDWREHG 125

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
             GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     GC+G +   +
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLEKGCNGGYPPKT 185

Query: 813 I-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG 871
             E     GLE   DYPY   +G    C  ++SK   +     +     +   + L + G
Sbjct: 186 YGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNDSTVLPLSEKIQAQKLKEIG 242

Query: 872 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGP 931
           PLS  LN+ L+  Y G  I      C+P+ L HAVL VGYG +  IPYW+V+NS G    
Sbjct: 243 PLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIVKNSLGVGFG 302

Query: 932 DEGFFKIERGNNACGIEQIAGYATID 957
           ++G+F+I RG   CGI  +   A ID
Sbjct: 303 EKGYFRIFRGAGTCGINLVVSTAIID 328



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 116/215 (53%), Gaps = 4/215 (1%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     G
Sbjct: 117 EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLEKG 176

Query: 73  CDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           C+G +   +  E     GLE   DYPY   +G    C  ++SK   +     +     + 
Sbjct: 177 CNGGYPPKTYGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNDSTVLPLSEKI 233

Query: 132 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 191
             + L + GPLS  LN+ L+  Y G  I      C+P+ L HAVL VGYG +  IPYW+V
Sbjct: 234 QAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIV 293

Query: 192 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +NS G    ++G+F+I RG   CGI  +   A ID
Sbjct: 294 KNSLGVGFGEKGYFRIFRGAGTCGINLVVSTAIID 328



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 40/61 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ L HAVL VGYG +  IPYW+V+NS G    ++G+F+I RG   CGI  +   A I
Sbjct: 268  CNPHGLNHAVLTVGYGTEFGIPYWIVKNSLGVGFGEKGYFRIFRGAGTCGINLVVSTAII 327

Query: 1025 D 1025
            D
Sbjct: 328  D 328


>gi|403183546|gb|EJY58173.1| AAEL017153-PA [Aedes aegypti]
          Length = 1165

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 169/331 (51%), Gaps = 27/331 (8%)

Query: 278  EGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHE----RYG 328
            EG  +   ++    F+ F +K  R+Y +  E + RF  FK +  K     K+E    +YG
Sbjct: 844  EGHYSKGEDHARHLFEKFKLKHSREYQSTLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYG 903

Query: 329  TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
             + F+D +  E   +TG             DR  V     E++++  +P+++DWR+    
Sbjct: 904  ITHFADMTSAEYRQRTGLVIPRDE------DRNHVGNPKAEIDENMELPESFDWRELGAV 957

Query: 389  GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQ 446
             P  +Q  CGSCWAFS+ G +EG + IKT  L E+S+ +L++C    S C G   D   +
Sbjct: 958  SPVKNQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQELLDCDAVDSACQGGYMDDAYK 1017

Query: 447  PIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYG 506
             IE     GLE E +YPY     ++  C ++ ++V +              M + L   G
Sbjct: 1018 AIEKI--GGLELESEYPYL--AKKQKTCHFNSTEVHVRVKGAVDLPKNETAMAQYLVANG 1073

Query: 507  PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNS 560
            P+S+GLN++ + FY G         CS  +L H VL+VGYG ++       +PYW+ +NS
Sbjct: 1074 PISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEYPMFNKTMPYWIVKNS 1133

Query: 561  WGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
            WGP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 1134 WGPKWGEQGYYRIFRGDNTCGVSEMASSAVL 1164



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 175/330 (53%), Gaps = 26/330 (7%)

Query: 644  EGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHE----RYG 694
            EG  +   ++    F+ F +K  R+Y +  E + RF  FK +  K     K+E    +YG
Sbjct: 844  EGHYSKGEDHARHLFEKFKLKHSREYQSTLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYG 903

Query: 695  TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
             + F+D +  E   +TG             DR  V     E++++  +P+++DWR+    
Sbjct: 904  ITHFADMTSAEYRQRTGLVIPRDE------DRNHVGNPKAEIDENMELPESFDWRELGAV 957

Query: 755  GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
             P  +Q  CGSCWAFS+ G +EG + IKT  L E+S+ +L++C    S C G + + + +
Sbjct: 958  SPVKNQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQELLDCDAVDSACQGGYMDDAYK 1017

Query: 815  YTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGP 872
               +  GLE E +YPY  A  +K  C ++ ++V +   K  +    +ET M + L   GP
Sbjct: 1018 AIEKIGGLELESEYPYL-AKKQK-TCHFNSTEVHVRV-KGAVDLPKNETAMAQYLVANGP 1074

Query: 873  LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSW 926
            +S+ LN++ +  Y G         CS  +L H VL+VGYG ++       +PYW+V+NSW
Sbjct: 1075 ISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEYPMFNKTMPYWIVKNSW 1134

Query: 927  GPIGPDEGFFKIERGNNACGIEQIAGYATI 956
            GP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 1135 GPKWGEQGYYRIFRGDNTCGVSEMASSAVL 1164



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 136/230 (59%), Gaps = 11/230 (4%)

Query: 4    EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
            E++++  +P+++DWR+     P  +Q +CGSCWAFS+ G +EG + IKT  L E+S+ +L
Sbjct: 938  EIDENMELPESFDWRELGAVSPVKNQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQEL 997

Query: 64   VECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
            ++C    S C G + + + +   +  GLE E +YPY  A  +K  C ++ ++V +   K 
Sbjct: 998  LDCDAVDSACQGGYMDDAYKAIEKIGGLELESEYPYL-AKKQK-TCHFNSTEVHVRV-KG 1054

Query: 123  FLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
             +    +ET M + L   GP+S+ LN++ +  Y G         CS  +L H VL+VGYG
Sbjct: 1055 AVDLPKNETAMAQYLVANGPISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYG 1114

Query: 182  KQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
             ++       +PYW+V+NSWGP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 1115 VKEYPMFNKTMPYWIVKNSWGPKWGEQGYYRIFRGDNTCGVSEMASSAVL 1164


>gi|223049408|gb|ACM80348.1| cysteine proteinase [Solanum lycopersicum]
          Length = 368

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 175/371 (47%), Gaps = 48/371 (12%)

Query: 612 FLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAFIVKRGRQ 668
           F L  V S L   S    +  ++    D + I   +  ++ ++L     F  F  + G+ 
Sbjct: 5   FSLVFVLSILLTTSFLLAVNGEIKGGDDDILIRQVVGDEDHHMLNAEHHFTLFKKRFGKT 64

Query: 669 YANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSERTYE 720
           YA+DEE   RF  FK +  +  +H++      +G ++FSD +P+E   K  F    R   
Sbjct: 65  YASDEEHHYRFSVFKANLRRAMRHQKLDPSAVHGVTQFSDMTPDEFSQK--FLGVNRRL- 121

Query: 721 RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYA 780
           R  +D  K   +  E      +P  +DWR+     P  +Q +CGSCW+FS  G LEG   
Sbjct: 122 RFPSDANKAPILPTE-----DLPSDFDWREHGAVTPVKNQGSCGSCWSFSTTGALEGANF 176

Query: 781 IKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYK 830
           + TGKLV  S+ QLV+C  +C         SGC G     + EYT +A GL  E+DYPY 
Sbjct: 177 LATGKLVSLSEQQLVDCDHECDPEEKDSCDSGCSGGLMNSAFEYTLKAGGLMREEDYPYT 236

Query: 831 NANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPI 890
               +K  C +D +KV        +     E +   L K GPL+V +N+  +  Y G   
Sbjct: 237 GT--DKATCKFDNTKVAAKVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGG-- 292

Query: 891 RKNDETCSPY----DLGHAVLLVGYG------KQDNIPYWLVRNSWGPIGPDEGFFKIER 940
                   PY     L H VLLVGYG      +    PYW+++NSWG    + G++KI R
Sbjct: 293 -----VSCPYICSKQLDHGVLLVGYGTGFSPIRMKEKPYWIIKNSWGEKWGESGYYKIRR 347

Query: 941 GNNACGIEQIA 951
           G N CG++ + 
Sbjct: 348 GRNVCGVDSMV 358



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 175/371 (47%), Gaps = 47/371 (12%)

Query: 246 FLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAFIVKRGRQ 302
           F L  V S L   S    +  ++    D + I   +  ++ ++L     F  F  + G+ 
Sbjct: 5   FSLVFVLSILLTTSFLLAVNGEIKGGDDDILIRQVVGDEDHHMLNAEHHFTLFKKRFGKT 64

Query: 303 YANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSERTYE 354
           YA+DEE   RF  FK +  +  +H++      +G ++FSD +P+E   K  F    R   
Sbjct: 65  YASDEEHHYRFSVFKANLRRAMRHQKLDPSAVHGVTQFSDMTPDEFSQK--FLGVNRRL- 121

Query: 355 RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYA 414
           R  +D  K   +  E      +P  +DWR+     P  +Q +CGSCW+FS  G LEG   
Sbjct: 122 RFPSDANKAPILPTE-----DLPSDFDWREHGAVTPVKNQGSCGSCWSFSTTGALEGANF 176

Query: 415 IKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA-GLESEKDYPYR 465
           + TGKLV  S+ QLV+C  +C      S   GC G  +    EYT +A GL  E+DYPY 
Sbjct: 177 LATGKLVSLSEQQLVDCDHECDPEEKDSCDSGCSGGLMNSAFEYTLKAGGLMREEDYPYT 236

Query: 466 NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPI 525
               +K  C +D +KV        +     E +   L K GPL+V +N+  +  Y G   
Sbjct: 237 --GTDKATCKFDNTKVAAKVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGG-- 292

Query: 526 RKNDETCSPY----DLGHAVLLVGYG------KQDDIPYWLARNSWGPIGPDEGFFKIER 575
                   PY     L H VLLVGYG      +  + PYW+ +NSWG    + G++KI R
Sbjct: 293 -----VSCPYICSKQLDHGVLLVGYGTGFSPIRMKEKPYWIIKNSWGEKWGESGYYKIRR 347

Query: 576 GNNACGIEQIA 586
           G N CG++ + 
Sbjct: 348 GRNVCGVDSMV 358



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 115/230 (50%), Gaps = 29/230 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+     P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 138 LPSDFDWREHGAVTPVKNQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 197

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC G     + EYT +A GL  E+DYPY     +K  C +D +KV     
Sbjct: 198 DPEEKDSCDSGCSGGLMNSAFEYTLKAGGLMREEDYPYTGT--DKATCKFDNTKVAAKVA 255

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 256 NFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGG-------VSCPYICSKQLDHGVL 308

Query: 177 LVGYG------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           LVGYG      +    PYW+++NSWG    + G++KI RG N CG++ + 
Sbjct: 309 LVGYGTGFSPIRMKEKPYWIIKNSWGEKWGESGYYKIRRGRNVCGVDSMV 358



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG------KQDDIPYWLVR 991
            ++ G  A  I  +     +  V     CS   L H VLLVGYG      +  + PYW+++
Sbjct: 272  VKNGPLAVAINAVFMQTYVGGVSCPYICSK-QLDHGVLLVGYGTGFSPIRMKEKPYWIIK 330

Query: 992  NSWGPIGPDEGFFKIERGNNACGIEQIA 1019
            NSWG    + G++KI RG N CG++ + 
Sbjct: 331  NSWGEKWGESGYYKIRRGRNVCGVDSMV 358


>gi|357619725|gb|EHJ72184.1| hypothetical protein KGM_03271 [Danaus plexippus]
          Length = 338

 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/297 (38%), Positives = 160/297 (53%), Gaps = 24/297 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK---QDGHKKHER-----YGTSEFSDRSPEEIL-C 708
           F+ FI    ++Y ++ E +ERF+ F    +D +  +ER     YG ++FSD S EE +  
Sbjct: 41  FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKY 99

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
            TG K  E          E  +K  +    +   PD +DWRKK V     +Q  CGSCWA
Sbjct: 100 YTGLKREES------PSNEDHKKTDLPESFNVTAPDQFDWRKKGVVSSIKNQKHCGSCWA 153

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYP 828
           FS A  +E  +AIKTGKL++ S+ QL++C K  SGC G     ++ Y    G  S K YP
Sbjct: 154 FSAAANVESIHAIKTGKLIDVSEQQLLDCDKYDSGCSGGLPWDALRYFVANGAMSLKSYP 213

Query: 829 YKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-N 886
           Y    G   KC YD SKV++   G         + +K+ LY  GPLS+ ++   I  Y  
Sbjct: 214 YVAKEG---KCRYDSSKVEIRLKGYKIFSKISEDQIKEHLYNIGPLSIAIDVSPIKPYVG 270

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
           G  + +  E C    + HAVLLVGYGK+ ++ YW+V+NSWGP   + G+F++ERG N
Sbjct: 271 GIVMEECHEVC---QVNHAVLLVGYGKEYSVEYWIVKNSWGPNWGENGYFRMERGVN 324



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/299 (38%), Positives = 159/299 (53%), Gaps = 27/299 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK---QDGHKKHER-----YGTSEFSDRSPEEIL-C 342
           F+ FI    ++Y ++ E +ERF+ F    +D +  +ER     YG ++FSD S EE +  
Sbjct: 41  FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKY 99

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
            TG K  E          E  +K  +    +   PD +DWRKK V     +Q  CGSCWA
Sbjct: 100 YTGLKREES------PSNEDHKKTDLPESFNVTAPDQFDWRKKGVVSSIKNQKHCGSCWA 153

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE-QPIEYTHQAGLESEKD 461
           FS A  +E  +AIKTGKL++ S+ QL++C K  SGC G  GL    + Y    G  S K 
Sbjct: 154 FSAAANVESIHAIKTGKLIDVSEQQLLDCDKYDSGCSG--GLPWDALRYFVANGAMSLKS 211

Query: 462 YPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY 520
           YPY    G   KC YD SKV++   G         + +K+ LY  GPLS+ ++   I  Y
Sbjct: 212 YPYVAKEG---KCRYDSSKVEIRLKGYKIFSKISEDQIKEHLYNIGPLSIAIDVSPIKPY 268

Query: 521 -NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
             G  + +  E C    + HAVLLVGYGK+  + YW+ +NSWGP   + G+F++ERG N
Sbjct: 269 VGGIVMEECHEVC---QVNHAVLLVGYGKEYSVEYWIVKNSWGPNWGENGYFRMERGVN 324



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/203 (42%), Positives = 118/203 (58%), Gaps = 8/203 (3%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           PD +DWRKK V     +Q  CGSCWAFS A  +E  +AIKTGKL++ S+ QL++C K  S
Sbjct: 128 PDQFDWRKKGVVSSIKNQKHCGSCWAFSAAANVESIHAIKTGKLIDVSEQQLLDCDKYDS 187

Query: 72  GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSE 130
           GC G     ++ Y    G  S K YPY    G   KC YD SKV++   G         +
Sbjct: 188 GCSGGLPWDALRYFVANGAMSLKSYPYVAKEG---KCRYDSSKVEIRLKGYKIFSKISED 244

Query: 131 TMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
            +K+ LY  GPLS+ ++   I  Y  G  + +  E C    + HAVLLVGYGK+ ++ YW
Sbjct: 245 QIKEHLYNIGPLSIAIDVSPIKPYVGGIVMEECHEVC---QVNHAVLLVGYGKEYSVEYW 301

Query: 190 LVRNSWGPIGPDEGFFKIERGNN 212
           +V+NSWGP   + G+F++ERG N
Sbjct: 302 IVKNSWGPNWGENGYFRMERGVN 324


>gi|110349473|gb|ABG73217.1| cathepsin L 1 precursor [Diaprepes abbreviatus]
          Length = 322

 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 150/313 (47%), Gaps = 29/313 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE----------RYGTSEFSDRSPEE 705
           F+AF +K G+ Y N  E   RF  FK +    ++H           + G + F+D + EE
Sbjct: 25  FQAFKLKHGKTYKNQVEETARFNIFKDNLRAIEQHNVLYEQGLVSYKKGINRFTDMTQEE 84

Query: 706 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
                      R +  + + ++        V     VPD+ DWR K       DQ  CGS
Sbjct: 85  F----------RAFLTLSSSKKPHFNTTEHVLTGLAVPDSIDWRTKGQVTGVKDQGNCGS 134

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-SGCDGCFFEPSIEYTHQAGLESE 824
           CWAFS+ G  E  Y  K GKLV  S+ QLV+C+    +GC+G + + +  Y    GLE+E
Sbjct: 135 CWAFSVTGSTEAAYYRKAGKLVSLSEQQLVDCSTDINAGCNGGYLDETFTYVKSKGLEAE 194

Query: 825 KDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 883
             YPYK  +G    C Y  SKV    +G   L       +   +   GP+SV +++  + 
Sbjct: 195 STYPYKGTDGS---CKYSASKVVTKVSGHKSLKSEDENALLDAVGNVGPVSVAIDATYLS 251

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
            Y        D+ CSP +L H VL+VGYG  +   YW+V+NSWG    + G+F++ RG N
Sbjct: 252 SYESGIYE--DDWCSPSELNHGVLVVGYGTSNGKKYWIVKNSWGGSFGESGYFRLLRGKN 309

Query: 944 ACGIEQIAGYATI 956
            CG+ +   Y  I
Sbjct: 310 ECGVAEDTVYPII 322



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 149/315 (47%), Gaps = 32/315 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE----------RYGTSEFSDRSPEE 339
           F+AF +K G+ Y N  E   RF  FK +    ++H           + G + F+D + EE
Sbjct: 25  FQAFKLKHGKTYKNQVEETARFNIFKDNLRAIEQHNVLYEQGLVSYKKGINRFTDMTQEE 84

Query: 340 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
                      R +  + + ++        V     VPD+ DWR K       DQ  CGS
Sbjct: 85  F----------RAFLTLSSSKKPHFNTTEHVLTGLAVPDSIDWRTKGQVTGVKDQGNCGS 134

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQAGLE 457
           CWAFS+ G  E  Y  K GKLV  S+ QLV+C+   +   GC+G  L++   Y    GLE
Sbjct: 135 CWAFSVTGSTEAAYYRKAGKLVSLSEQQLVDCSTDIN--AGCNGGYLDETFTYVKSKGLE 192

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL 516
           +E  YPY+  +G    C Y  SKV    +G   L       +   +   GP+SV +++  
Sbjct: 193 AESTYPYKGTDGS---CKYSASKVVTKVSGHKSLKSEDENALLDAVGNVGPVSVAIDATY 249

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
           +  Y        D+ CSP +L H VL+VGYG  +   YW+ +NSWG    + G+F++ RG
Sbjct: 250 LSSYESGIYE--DDWCSPSELNHGVLVVGYGTSNGKKYWIVKNSWGGSFGESGYFRLLRG 307

Query: 577 NNACGIEQIAGYATI 591
            N CG+ +   Y  I
Sbjct: 308 KNECGVAEDTVYPII 322



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 116/218 (53%), Gaps = 7/218 (3%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
            VPD+ DWR K       DQ +CGSCWAFS+ G  E  Y  K GKLV  S+ QLV+C+  
Sbjct: 110 AVPDSIDWRTKGQVTGVKDQGNCGSCWAFSVTGSTEAAYYRKAGKLVSLSEQQLVDCSTD 169

Query: 70  C-SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFN 127
             +GC+G + + +  Y    GLE+E  YPYK  +G    C Y  SKV    +G   L   
Sbjct: 170 INAGCNGGYLDETFTYVKSKGLEAESTYPYKGTDGS---CKYSASKVVTKVSGHKSLKSE 226

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               +   +   GP+SV +++  +  Y        D+ CSP +L H VL+VGYG  +   
Sbjct: 227 DENALLDAVGNVGPVSVAIDATYLSSYESGIYE--DDWCSPSELNHGVLVVGYGTSNGKK 284

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           YW+V+NSWG    + G+F++ RG N CG+ +   Y  I
Sbjct: 285 YWIVKNSWGGSFGESGYFRLLRGKNECGVAEDTVYPII 322



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            D+ CSP +L H VL+VGYG  +   YW+V+NSWG    + G+F++ RG N CG+ +   Y
Sbjct: 260  DDWCSPSELNHGVLVVGYGTSNGKKYWIVKNSWGGSFGESGYFRLLRGKNECGVAEDTVY 319

Query: 1022 ATI 1024
              I
Sbjct: 320  PII 322


>gi|161408101|dbj|BAF94154.1| cathepsin F-like cysteine protease [Plautia stali]
          Length = 803

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 155/306 (50%), Gaps = 27/306 (8%)

Query: 667 RQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 717
           R Y   EE+K+RF  F+         Q   +   +YG + FSD S +E      FK    
Sbjct: 509 RSYKTTEELKKRFRIFRANMKKADYLQKTEQGTAKYGVTIFSDISSKE------FKKHYL 562

Query: 718 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEG 777
             ++   D  K ++ + ++  +  +P+ +DWR  N   P  +Q  CGSCWAFS+ G +EG
Sbjct: 563 GLKKRTPDI-KFKQEMAQI-PNITLPEEYDWRNYNAVTPVKNQGMCGSCWAFSVTGNIEG 620

Query: 778 QYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEK 836
           QYAIKTG LV  S+ +LV+C K   GC+G  FE +     +  GLE E DYPY   +G  
Sbjct: 621 QYAIKTGNLVSLSEQELVDCDKYDDGCEGGLFETAYHAIEELGGLELESDYPY---SGRD 677

Query: 837 FKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET 896
             C ++ S+V++         N    M K L   GP+S+ +N++ +  Y G         
Sbjct: 678 NTCHFNSSEVRVSITSSVNISNDETDMAKWLVANGPISIGINANAMQFYLGGVSHPLKFL 737

Query: 897 CSPYDLGHAVLLVGYG------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           C P  L H VL+VGYG         ++PYWL++NSW      +G++ + RG+ +CG+ Q 
Sbjct: 738 CDPKTLDHGVLIVGYGIHRTWLLHRHLPYWLIKNSWSSYWGAKGYYMLYRGDGSCGVNQW 797

Query: 951 AGYATI 956
              A +
Sbjct: 798 PSSAVL 803



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 155/308 (50%), Gaps = 30/308 (9%)

Query: 301 RQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 351
           R Y   EE+K+RF  F+         Q   +   +YG + FSD S +E      FK    
Sbjct: 509 RSYKTTEELKKRFRIFRANMKKADYLQKTEQGTAKYGVTIFSDISSKE------FKKHYL 562

Query: 352 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEG 411
             ++   D  K ++ + ++  +  +P+ +DWR  N   P  +Q  CGSCWAFS+ G +EG
Sbjct: 563 GLKKRTPDI-KFKQEMAQI-PNITLPEEYDWRNYNAVTPVKNQGMCGSCWAFSVTGNIEG 620

Query: 412 QYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ--AGLESEKDYPYRNGNG 469
           QYAIKTG LV  S+ +LV+C K   GC G  GL +   +  +   GLE E DYPY   +G
Sbjct: 621 QYAIKTGNLVSLSEQELVDCDKYDDGCEG--GLFETAYHAIEELGGLELESDYPY---SG 675

Query: 470 EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKND 529
               C ++ S+V++         N    M K L   GP+S+G+N++ + FY G       
Sbjct: 676 RDNTCHFNSSEVRVSITSSVNISNDETDMAKWLVANGPISIGINANAMQFYLGGVSHPLK 735

Query: 530 ETCSPYDLGHAVLLVGYG------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIE 583
             C P  L H VL+VGYG          +PYWL +NSW      +G++ + RG+ +CG+ 
Sbjct: 736 FLCDPKTLDHGVLIVGYGIHRTWLLHRHLPYWLIKNSWSSYWGAKGYYMLYRGDGSCGVN 795

Query: 584 QIAGYATI 591
           Q    A +
Sbjct: 796 QWPSSAVL 803



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 120/222 (54%), Gaps = 10/222 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR  N   P  +Q  CGSCWAFS+ G +EGQYAIKTG LV  S+ +LV+C K  
Sbjct: 585 LPEEYDWRNYNAVTPVKNQGMCGSCWAFSVTGNIEGQYAIKTGNLVSLSEQELVDCDKYD 644

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G  FE +     +  GLE E DYPY   +G    C ++ S+V++         N  
Sbjct: 645 DGCEGGLFETAYHAIEELGGLELESDYPY---SGRDNTCHFNSSEVRVSITSSVNISNDE 701

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG------KQ 183
             M K L   GP+S+ +N++ +  Y G         C P  L H VL+VGYG        
Sbjct: 702 TDMAKWLVANGPISIGINANAMQFYLGGVSHPLKFLCDPKTLDHGVLIVGYGIHRTWLLH 761

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            ++PYWL++NSW      +G++ + RG+ +CG+ Q    A +
Sbjct: 762 RHLPYWLIKNSWSSYWGAKGYYMLYRGDGSCGVNQWPSSAVL 803


>gi|168018894|ref|XP_001761980.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686697|gb|EDQ73084.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 188/390 (48%), Gaps = 54/390 (13%)

Query: 600 LEKKAIMLIQAVFL-LCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETF 658
           +E + ++L+  V L   G A+ L        +TD  ++         +L        + F
Sbjct: 1   MESRGLLLVGIVVLGFAGFAASLPTGDTIREVTDDALSNGSVEQFAHALI----GAEKRF 56

Query: 659 KAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK- 709
           ++F+   G+ Y + EE + RF  FK +  K  KH+       +G + FSD + EE   K 
Sbjct: 57  ESFMKDFGKVYHSVEEYEHRFGVFKSNLLKALKHQALDPTASHGVTMFSDLTEEEFTSKY 116

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
            G K        +++   +   +  E      +P  +DWR+K   GP  DQ  CGSCWAF
Sbjct: 117 LGLK-----RPSVLSSAPQAPPLPTE-----DLPPNFDWREKGAVGPVKDQGGCGSCWAF 166

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G +EG + + +GKLV  S+ QLV+C  QC         +GC+G F   + +Y   A 
Sbjct: 167 STTGAVEGAHFLNSGKLVSLSEQQLVDCDHQCDREEADACDAGCNGGFMTNAYQYVEAAG 226

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLN 878
           GLE E DYPY+  +G   KC +D +KV +    +F +    E  +   L K GPL++ +N
Sbjct: 227 GLELESDYPYEGRDG---KCKFDSNKVAVKV-SNFTNIPVDEDQVAAYLIKSGPLAIGIN 282

Query: 879 SDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNI-------PYWLVRNSWGP 928
           ++ +  Y      PI      C+  +L H VLLVGY ++          PYW+++NSWGP
Sbjct: 283 AEFMQTYIAGVSCPI-----FCNKRNLDHGVLLVGYAERGFAPARLAYKPYWIIKNSWGP 337

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATIDV 958
              D G++KI RG+  CG+  +    +  V
Sbjct: 338 NWGDNGYYKICRGHGECGLNTMVSAVSASV 367



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 182/389 (46%), Gaps = 51/389 (13%)

Query: 234 LEKKAIMLIQAVFL-LCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETF 292
           +E + ++L+  V L   G A+ L        +TD  ++         +L        + F
Sbjct: 1   MESRGLLLVGIVVLGFAGFAASLPTGDTIREVTDDALSNGSVEQFAHALI----GAEKRF 56

Query: 293 KAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK- 343
           ++F+   G+ Y + EE + RF  FK +  K  KH+       +G + FSD + EE   K 
Sbjct: 57  ESFMKDFGKVYHSVEEYEHRFGVFKSNLLKALKHQALDPTASHGVTMFSDLTEEEFTSKY 116

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
            G K        +++   +   +  E      +P  +DWR+K   GP  DQ  CGSCWAF
Sbjct: 117 LGLK-----RPSVLSSAPQAPPLPTE-----DLPPNFDWREKGAVGPVKDQGGCGSCWAF 166

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEYTHQA- 454
           S  G +EG + + +GKLV  S+ QLV+C  QC       C  GC+G  +    +Y   A 
Sbjct: 167 STTGAVEGAHFLNSGKLVSLSEQQLVDCDHQCDREEADACDAGCNGGFMTNAYQYVEAAG 226

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GLE E DYPY   +G   KC +D +KV +            + +   L K GPL++G+N+
Sbjct: 227 GLELESDYPYEGRDG---KCKFDSNKVAVKVSNFTNIPVDEDQVAAYLIKSGPLAIGINA 283

Query: 515 HLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLARNSWGPI 564
             +  Y      PI      C+  +L H VLLVGY ++          PYW+ +NSWGP 
Sbjct: 284 EFMQTYIAGVSCPI-----FCNKRNLDHGVLLVGYAERGFAPARLAYKPYWIIKNSWGPN 338

Query: 565 GPDEGFFKIERGNNACGIEQIAGYATIDV 593
             D G++KI RG+  CG+  +    +  V
Sbjct: 339 WGDNGYYKICRGHGECGLNTMVSAVSASV 367



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 128/238 (53%), Gaps = 30/238 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K   GP  DQ  CGSCWAFS  G +EG + + +GKLV  S+ QLV+C  QC
Sbjct: 139 LPPNFDWREKGAVGPVKDQGGCGSCWAFSTTGAVEGAHFLNSGKLVSLSEQQLVDCDHQC 198

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC+G F   + +Y   A GLE E DYPY+  +G   KC +D +KV +   
Sbjct: 199 DREEADACDAGCNGGFMTNAYQYVEAAGGLELESDYPYEGRDG---KCKFDSNKVAVKV- 254

Query: 121 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 176
            +F +    E  +   L K GPL++ +N++ +  Y      PI      C+  +L H VL
Sbjct: 255 SNFTNIPVDEDQVAAYLIKSGPLAIGINAEFMQTYIAGVSCPI-----FCNKRNLDHGVL 309

Query: 177 LVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           LVGY ++          PYW+++NSWGP   D G++KI RG+  CG+  +    +  V
Sbjct: 310 LVGYAERGFAPARLAYKPYWIIKNSWGPNWGDNGYYKICRGHGECGLNTMVSAVSASV 367


>gi|347968729|ref|XP_003436276.1| AGAP002879-PC [Anopheles gambiae str. PEST]
 gi|333467870|gb|EGK96737.1| AGAP002879-PC [Anopheles gambiae str. PEST]
          Length = 953

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 182/354 (51%), Gaps = 33/354 (9%)

Query: 258 PSLTDRITDQVVAR--VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 315
           P+ T   T   V R  V +L I+     D+ ++   F  F     RQYA+  E + RF  
Sbjct: 612 PAPTPVTTAPAVKRRSVRSLKID-----DDAHVRRMFDKFRHHHRRQYASSMEHEMRFNI 666

Query: 316 FKQDGHK-----KHER----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 366
           F+ +  K     K ER    YG ++F+D +  E    TG    +      V +R   E+ 
Sbjct: 667 FRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLVVPKHDRANHVGNRVASEED 726

Query: 367 LMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 426
           +  V   G +P ++DWR         +Q +CGSCWAFS  G +EG + IKT KL  +S+ 
Sbjct: 727 VAGV---GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQ 783

Query: 427 QLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF 484
           +L++C K  +GCGG   D   + IE     GLE E DYPY     +K  C +++S +   
Sbjct: 784 ELIDCDKVDNGCGGGYMDDAFKAIE--QLGGLELENDYPY-EAKAQK-SCHFNRS-LSHV 838

Query: 485 TGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLL 543
             K  +    +ET + K L K GP+++GLN++ + FY G         C+   + H VL+
Sbjct: 839 QVKGAVDMPKNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLI 898

Query: 544 VGYGKQD------DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           VGYG ++       +PYW+ +NSWGP   ++G+++I RG+N+CG+ ++A  A +
Sbjct: 899 VGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASSAIL 952



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 183/352 (51%), Gaps = 30/352 (8%)

Query: 624 PSLTDRITDQVVAR--VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 681
           P+ T   T   V R  V +L I+     D+ ++   F  F     RQYA+  E + RF  
Sbjct: 612 PAPTPVTTAPAVKRRSVRSLKID-----DDAHVRRMFDKFRHHHRRQYASSMEHEMRFNI 666

Query: 682 FKQDGHK-----KHER----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 732
           F+ +  K     K ER    YG ++F+D +  E    TG    +      V +R   E+ 
Sbjct: 667 FRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLVVPKHDRANHVGNRVASEED 726

Query: 733 LMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 792
           +  V   G +P ++DWR         +Q +CGSCWAFS  G +EG + IKT KL  +S+ 
Sbjct: 727 VAGV---GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQ 783

Query: 793 QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 851
           +L++C K  +GC G + + + +   Q  GLE E DYPY+ A  +K  C +++S +     
Sbjct: 784 ELIDCDKVDNGCGGGYMDDAFKAIEQLGGLELENDYPYE-AKAQK-SCHFNRS-LSHVQV 840

Query: 852 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 910
           K  +    +ET + K L K GP+++ LN++ +  Y G         C+   + H VL+VG
Sbjct: 841 KGAVDMPKNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLIVG 900

Query: 911 YGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           YG ++       +PYW+++NSWGP   ++G+++I RG+N+CG+ ++A  A +
Sbjct: 901 YGIKEYPMFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASSAIL 952



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 130/225 (57%), Gaps = 11/225 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P ++DWR         +Q  CGSCWAFS  G +EG + IKT KL  +S+ +L++C K
Sbjct: 731 GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQELIDCDK 790

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GC G + + + +   Q  GLE E DYPY+ A  +K  C +++S +     K  +   
Sbjct: 791 VDNGCGGGYMDDAFKAIEQLGGLELENDYPYE-AKAQK-SCHFNRS-LSHVQVKGAVDMP 847

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 184
            +ET + K L K GP+++ LN++ +  Y G         C+   + H VL+VGYG ++  
Sbjct: 848 KNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKEYP 907

Query: 185 ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +PYW+++NSWGP   ++G+++I RG+N+CG+ ++A  A +
Sbjct: 908 MFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASSAIL 952


>gi|146335582|gb|ABQ23400.1| cathepsin L isotype 3 [Trypanoplasma borreli]
          Length = 442

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 151/314 (48%), Gaps = 23/314 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           F+ F     R YA+ +E ++RFE F  +  K  E         +G +EF+D S EE   +
Sbjct: 25  FRDFKTTHARNYASADEERKRFEIFAANMKKAAELNRKNPMATFGPNEFADMSSEEFQTR 84

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                + R Y  ++A   K  K   E E +  V    DWR K    P  +Q +CGSCW+F
Sbjct: 85  HN---AARHYAAVMARPPKNTKTFTEEEINAAVGQKVDWRLKGAVTPVKNQGSCGSCWSF 141

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKD 461
           S  G +EGQ+AI TG+LV  S+ +LV C     GC G   D     +   H   + +E  
Sbjct: 142 STTGNIEGQHAIATGQLVSLSEQELVSCDTVDDGCSGGLMDNAFGWLLSAHNGQITTEAS 201

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN----GSETMKKILYKYGPLSVGLNSHLI 517
           YPY +GNG    C ++ +   +  G     F+        M   ++KYGPLS+G+++   
Sbjct: 202 YPYVSGNGIVPACTFNSNSNPV--GATITSFHDIPKTERDMAAFVFKYGPLSIGVDASSW 259

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
             Y G  +      CS   + H VL+VG+      PYW+ +NSW  +  ++G+ ++ +G+
Sbjct: 260 QSYIGGILSH----CSDVQIDHGVLIVGFDDTASTPYWIIKNSWSSMWGEQGYIRVAKGS 315

Query: 578 NACGIEQIAGYATI 591
           N CG+      + +
Sbjct: 316 NQCGLTSFPSSSVV 329



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 152/314 (48%), Gaps = 24/314 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           F+ F     R YA+ +E ++RFE F  +  K  E         +G +EF+D S EE   +
Sbjct: 25  FRDFKTTHARNYASADEERKRFEIFAANMKKAAELNRKNPMATFGPNEFADMSSEEFQTR 84

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                + R Y  ++A   K  K   E E +  V    DWR K    P  +Q +CGSCW+F
Sbjct: 85  HN---AARHYAAVMARPPKNTKTFTEEEINAAVGQKVDWRLKGAVTPVKNQGSCGSCWSF 141

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKD 826
           S  G +EGQ+AI TG+LV  S+ +LV C     GC G   + +  +    H   + +E  
Sbjct: 142 STTGNIEGQHAIATGQLVSLSEQELVSCDTVDDGCSGGLMDNAFGWLLSAHNGQITTEAS 201

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN----GSETMKKILYKYGPLSVLLNSDLI 882
           YPY + NG    C ++ +   +  G     F+        M   ++KYGPLS+ +++   
Sbjct: 202 YPYVSGNGIVPACTFNSNSNPV--GATITSFHDIPKTERDMAAFVFKYGPLSIGVDASSW 259

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y G  +      CS   + H VL+VG+    + PYW+++NSW  +  ++G+ ++ +G+
Sbjct: 260 QSYIGGILSH----CSDVQIDHGVLIVGFDDTASTPYWIIKNSWSSMWGEQGYIRVAKGS 315

Query: 943 NACGIEQIAGYATI 956
           N CG+      + +
Sbjct: 316 NQCGLTSFPSSSVV 329



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 13/231 (5%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
             E E +  V    DWR K    P  +Q  CGSCW+FS  G +EGQ+AI TG+LV  S+ 
Sbjct: 105 FTEEEINAAVGQKVDWRLKGAVTPVKNQGSCGSCWSFSTTGNIEGQHAIATGQLVSLSEQ 164

Query: 62  QLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
           +LV C     GC G   + +  +    H   + +E  YPY + NG    C ++ +   + 
Sbjct: 165 ELVSCDTVDDGCSGGLMDNAFGWLLSAHNGQITTEASYPYVSGNGIVPACTFNSNSNPV- 223

Query: 119 TGKDFLHFN----GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 174
            G     F+        M   ++KYGPLS+ +++     Y G  +      CS   + H 
Sbjct: 224 -GATITSFHDIPKTERDMAAFVFKYGPLSIGVDASSWQSYIGGILSH----CSDVQIDHG 278

Query: 175 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           VL+VG+    + PYW+++NSW  +  ++G+ ++ +G+N CG+      + +
Sbjct: 279 VLIVGFDDTASTPYWIIKNSWSSMWGEQGYIRVAKGSNQCGLTSFPSSSVV 329



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CS   + H VL+VG+      PYW+++NSW  +  ++G+ ++ +G+N CG+      + +
Sbjct: 270  CSDVQIDHGVLIVGFDDTASTPYWIIKNSWSSMWGEQGYIRVAKGSNQCGLTSFPSSSVV 329


>gi|270011071|gb|EFA07519.1| cystatin [Tribolium castaneum]
          Length = 1761

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 148/274 (54%), Gaps = 23/274 (8%)

Query: 327  YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
            YG + F+D + +E     G +   R        + K+  + +        P  +DWRKKN
Sbjct: 1501 YGITRFADMTQKEFSRSLGLRTDLRNENETPFAQAKIPNIEL--------PKEFDWRKKN 1552

Query: 387  VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGL 444
            V     +Q  CGSCWAFS+ G +EGQYA++ GKL+EFS+ +LV+C     GC G   D  
Sbjct: 1553 VVTEVKNQEQCGSCWAFSVTGNVEGQYALRHGKLLEFSEQELVDCDTDDQGCNGGLMDTA 1612

Query: 445  EQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILY 503
             + IE     GLE+E+DYPY   + E  KC ++++  ++  TG   +  N ++ M K L 
Sbjct: 1613 YRSIEKI--GGLETEQDYPY---DAEDEKCHFNRTLARVQVTGALNISHNETD-MAKWLV 1666

Query: 504  KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLA 557
              GP+S+ +N++ + FY G         CSP +L H VL+VGYG  +       +PYW+ 
Sbjct: 1667 ANGPISIAINANAMQFYMGGVSHPFKFLCSPKNLDHGVLIVGYGVHNYPLFKKSLPYWIV 1726

Query: 558  RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
            +NSWG    ++G++++ RG+  CG+ Q    A +
Sbjct: 1727 KNSWGTGWGEQGYYRVYRGDGTCGLNQTPSSAIV 1760



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 151/273 (55%), Gaps = 22/273 (8%)

Query: 693  YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
            YG + F+D + +E     G +   R        + K+  + +        P  +DWRKKN
Sbjct: 1501 YGITRFADMTQKEFSRSLGLRTDLRNENETPFAQAKIPNIEL--------PKEFDWRKKN 1552

Query: 753  VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
            V     +Q  CGSCWAFS+ G +EGQYA++ GKL+EFS+ +LV+C     GC+G   + +
Sbjct: 1553 VVTEVKNQEQCGSCWAFSVTGNVEGQYALRHGKLLEFSEQELVDCDTDDQGCNGGLMDTA 1612

Query: 813  IEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSET-MKKILYK 869
                 +  GLE+E+DYPY   + E  KC ++++  ++  TG   L+ + +ET M K L  
Sbjct: 1613 YRSIEKIGGLETEQDYPY---DAEDEKCHFNRTLARVQVTGA--LNISHNETDMAKWLVA 1667

Query: 870  YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVR 923
             GP+S+ +N++ +  Y G         CSP +L H VL+VGYG  +      ++PYW+V+
Sbjct: 1668 NGPISIAINANAMQFYMGGVSHPFKFLCSPKNLDHGVLIVGYGVHNYPLFKKSLPYWIVK 1727

Query: 924  NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
            NSWG    ++G++++ RG+  CG+ Q    A +
Sbjct: 1728 NSWGTGWGEQGYYRVYRGDGTCGLNQTPSSAIV 1760



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 135/224 (60%), Gaps = 14/224 (6%)

Query: 11   VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            +P  +DWRKKNV     +Q  CGSCWAFS+ G +EGQYA++ GKL+EFS+ +LV+C    
Sbjct: 1542 LPKEFDWRKKNVVTEVKNQEQCGSCWAFSVTGNVEGQYALRHGKLLEFSEQELVDCDTDD 1601

Query: 71   SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG 128
             GC+G   + +     +  GLE+E+DYPY   + E  KC ++++  ++  TG   L+ + 
Sbjct: 1602 QGCNGGLMDTAYRSIEKIGGLETEQDYPY---DAEDEKCHFNRTLARVQVTGA--LNISH 1656

Query: 129  SET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD--- 184
            +ET M K L   GP+S+ +N++ +  Y G         CSP +L H VL+VGYG  +   
Sbjct: 1657 NETDMAKWLVANGPISIAINANAMQFYMGGVSHPFKFLCSPKNLDHGVLIVGYGVHNYPL 1716

Query: 185  ---NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
               ++PYW+V+NSWG    ++G++++ RG+  CG+ Q    A +
Sbjct: 1717 FKKSLPYWIVKNSWGTGWGEQGYYRVYRGDGTCGLNQTPSSAIV 1760


>gi|189239337|ref|XP_973607.2| PREDICTED: similar to cathepsin F-like cysteine protease [Tribolium
            castaneum]
          Length = 1726

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 148/274 (54%), Gaps = 23/274 (8%)

Query: 327  YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
            YG + F+D + +E     G +   R        + K+  + +        P  +DWRKKN
Sbjct: 1466 YGITRFADMTQKEFSRSLGLRTDLRNENETPFAQAKIPNIEL--------PKEFDWRKKN 1517

Query: 387  VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGL 444
            V     +Q  CGSCWAFS+ G +EGQYA++ GKL+EFS+ +LV+C     GC G   D  
Sbjct: 1518 VVTEVKNQEQCGSCWAFSVTGNVEGQYALRHGKLLEFSEQELVDCDTDDQGCNGGLMDTA 1577

Query: 445  EQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILY 503
             + IE     GLE+E+DYPY   + E  KC ++++  ++  TG   +  N ++ M K L 
Sbjct: 1578 YRSIEKI--GGLETEQDYPY---DAEDEKCHFNRTLARVQVTGALNISHNETD-MAKWLV 1631

Query: 504  KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLA 557
              GP+S+ +N++ + FY G         CSP +L H VL+VGYG  +       +PYW+ 
Sbjct: 1632 ANGPISIAINANAMQFYMGGVSHPFKFLCSPKNLDHGVLIVGYGVHNYPLFKKSLPYWIV 1691

Query: 558  RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
            +NSWG    ++G++++ RG+  CG+ Q    A +
Sbjct: 1692 KNSWGTGWGEQGYYRVYRGDGTCGLNQTPSSAIV 1725



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 151/273 (55%), Gaps = 22/273 (8%)

Query: 693  YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
            YG + F+D + +E     G +   R        + K+  + +        P  +DWRKKN
Sbjct: 1466 YGITRFADMTQKEFSRSLGLRTDLRNENETPFAQAKIPNIEL--------PKEFDWRKKN 1517

Query: 753  VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
            V     +Q  CGSCWAFS+ G +EGQYA++ GKL+EFS+ +LV+C     GC+G   + +
Sbjct: 1518 VVTEVKNQEQCGSCWAFSVTGNVEGQYALRHGKLLEFSEQELVDCDTDDQGCNGGLMDTA 1577

Query: 813  IEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSET-MKKILYK 869
                 +  GLE+E+DYPY   + E  KC ++++  ++  TG   L+ + +ET M K L  
Sbjct: 1578 YRSIEKIGGLETEQDYPY---DAEDEKCHFNRTLARVQVTGA--LNISHNETDMAKWLVA 1632

Query: 870  YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVR 923
             GP+S+ +N++ +  Y G         CSP +L H VL+VGYG  +      ++PYW+V+
Sbjct: 1633 NGPISIAINANAMQFYMGGVSHPFKFLCSPKNLDHGVLIVGYGVHNYPLFKKSLPYWIVK 1692

Query: 924  NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
            NSWG    ++G++++ RG+  CG+ Q    A +
Sbjct: 1693 NSWGTGWGEQGYYRVYRGDGTCGLNQTPSSAIV 1725



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 135/224 (60%), Gaps = 14/224 (6%)

Query: 11   VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            +P  +DWRKKNV     +Q  CGSCWAFS+ G +EGQYA++ GKL+EFS+ +LV+C    
Sbjct: 1507 LPKEFDWRKKNVVTEVKNQEQCGSCWAFSVTGNVEGQYALRHGKLLEFSEQELVDCDTDD 1566

Query: 71   SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG 128
             GC+G   + +     +  GLE+E+DYPY   + E  KC ++++  ++  TG   L+ + 
Sbjct: 1567 QGCNGGLMDTAYRSIEKIGGLETEQDYPY---DAEDEKCHFNRTLARVQVTGA--LNISH 1621

Query: 129  SET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD--- 184
            +ET M K L   GP+S+ +N++ +  Y G         CSP +L H VL+VGYG  +   
Sbjct: 1622 NETDMAKWLVANGPISIAINANAMQFYMGGVSHPFKFLCSPKNLDHGVLIVGYGVHNYPL 1681

Query: 185  ---NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
               ++PYW+V+NSWG    ++G++++ RG+  CG+ Q    A +
Sbjct: 1682 FKKSLPYWIVKNSWGTGWGEQGYYRVYRGDGTCGLNQTPSSAIV 1725


>gi|19195|emb|CAA78403.1| pre-pro-cysteine proteinase [Solanum lycopersicum]
          Length = 361

 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 182/382 (47%), Gaps = 56/382 (14%)

Query: 611 VFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYA 670
           +FLL  +A  L   ++     D ++ +V    + G+      N    F  F  K G+ YA
Sbjct: 2   LFLLSFLAFALFSSAIAFSDDDPLIRQV----VSGNDDNHMLNAEHHFSLFKAKFGKIYA 57

Query: 671 NDEEIKERFEYFKQDGH--KKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERI 722
           + EE   R + FK + H  K+H+       +G ++FSD +P E           RTY  +
Sbjct: 58  SQEEHDHRLKVFKANLHRAKRHQLLDPSAEHGITQFSDLTPSEF---------RRTYLGL 108

Query: 723 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 782
              R  +      +     +P  +DWR+K       +Q +CGSCW+FS  G +EG + + 
Sbjct: 109 NKPRPNLNAEKAPILPTKDLPSDFDWREKGAVTDVKNQGSCGSCWSFSTTGAVEGAHFLA 168

Query: 783 TGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNA 832
           TG+LV  S+ QLV+C  +C         +GC+G     + EYT +A GL+ EKDYPY   
Sbjct: 169 TGELVSLSEQQLVDCDHECDPVEKNDCDAGCNGGLMTTAFEYTLKAGGLQLEKDYPYTGR 228

Query: 833 NGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY---NGTP 889
           NG   KC +DKS++        +     + +   L K+GPL+V +N+  +  Y      P
Sbjct: 229 NG---KCHFDKSRIAASVSNFSVVGLDEDQIAANLLKHGPLAVGINAAWMQTYVRGVSCP 285

Query: 890 I---RKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIE 939
           +   ++ D         H VLLVGYG +        N PYW+++NSWG    + G++KI 
Sbjct: 286 LICFKRQD---------HGVLLVGYGSEGFAPIRLKNKPYWIIKNSWGKTWGEHGYYKIC 336

Query: 940 RGNNACGIEQIAGYATIDVVKN 961
           RG++ CG++ +    T     N
Sbjct: 337 RGHHICGVDAMVSTVTATHTTN 358



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 180/376 (47%), Gaps = 55/376 (14%)

Query: 245 VFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYA 304
           +FLL  +A  L   ++     D ++ +V    + G+      N    F  F  K G+ YA
Sbjct: 2   LFLLSFLAFALFSSAIAFSDDDPLIRQV----VSGNDDNHMLNAEHHFSLFKAKFGKIYA 57

Query: 305 NDEEIKERFEYFKQDGH--KKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERI 356
           + EE   R + FK + H  K+H+       +G ++FSD +P E           RTY  +
Sbjct: 58  SQEEHDHRLKVFKANLHRAKRHQLLDPSAEHGITQFSDLTPSEF---------RRTYLGL 108

Query: 357 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 416
              R  +      +     +P  +DWR+K       +Q +CGSCW+FS  G +EG + + 
Sbjct: 109 NKPRPNLNAEKAPILPTKDLPSDFDWREKGAVTDVKNQGSCGSCWSFSTTGAVEGAHFLA 168

Query: 417 TGKLVEFSKSQLVECAKQCSGC------GGCDG--LEQPIEYTHQA-GLESEKDYPYRNG 467
           TG+LV  S+ QLV+C  +C          GC+G  +    EYT +A GL+ EKDYPY   
Sbjct: 169 TGELVSLSEQQLVDCDHECDPVEKNDCDAGCNGGLMTTAFEYTLKAGGLQLEKDYPYTGR 228

Query: 468 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY---NGTP 524
           NG   KC +DKS++        +     + +   L K+GPL+VG+N+  +  Y      P
Sbjct: 229 NG---KCHFDKSRIAASVSNFSVVGLDEDQIAANLLKHGPLAVGINAAWMQTYVRGVSCP 285

Query: 525 I---RKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIE 574
           +   ++ D         H VLLVGYG +        + PYW+ +NSWG    + G++KI 
Sbjct: 286 LICFKRQD---------HGVLLVGYGSEGFAPIRLKNKPYWIIKNSWGKTWGEHGYYKIC 336

Query: 575 RGNNACGIEQIAGYAT 590
           RG++ CG++ +    T
Sbjct: 337 RGHHICGVDAMVSTVT 352



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 35/237 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K       +Q  CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C
Sbjct: 128 LPSDFDWREKGAVTDVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHEC 187

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC+G     + EYT +A GL+ EKDYPY   NG   KC +DKS++     
Sbjct: 188 DPVEKNDCDAGCNGGLMTTAFEYTLKAGGLQLEKDYPYTGRNG---KCHFDKSRIAASVS 244

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY---NGTPI---RKNDETCSPYDLGHA 174
              +     + +   L K+GPL+V +N+  +  Y      P+   ++ D         H 
Sbjct: 245 NFSVVGLDEDQIAANLLKHGPLAVGINAAWMQTYVRGVSCPLICFKRQD---------HG 295

Query: 175 VLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           VLLVGYG +        N PYW+++NSWG    + G++KI RG++ CG++ +    T
Sbjct: 296 VLLVGYGSEGFAPIRLKNKPYWIIKNSWGKTWGEHGYYKICRGHHICGVDAMVSTVT 352



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 7/59 (11%)

Query: 972  HAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            H VLLVGYG +        + PYW+++NSWG    + G++KI RG++ CG++ +    T
Sbjct: 294  HGVLLVGYGSEGFAPIRLKNKPYWIIKNSWGKTWGEHGYYKICRGHHICGVDAMVSTVT 352


>gi|124484383|dbj|BAF46302.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 369

 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/335 (34%), Positives = 159/335 (47%), Gaps = 46/335 (13%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 704
           N    F  F  K G+ YA  EE   R   FK +    K+H+       +G ++FSD +P+
Sbjct: 42  NADHHFTLFKSKYGKSYATQEEHDYRLSVFKANLRRAKRHQLLDPSAVHGVTKFSDLTPK 101

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLM-------EVEKDGPVPDAWDWRKKNVTGPA 757
           E           RT+  I        K+ +       E+     +P  +DWR        
Sbjct: 102 EF---------RRTFLGIRKSSSGKRKLKLPADAHAAEILPTSDLPSDFDWRDYGAVTGV 152

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCF 808
            DQ +CGSCW+FS  G LEG   + TG+LV  S+ QLV+C   C         SGC+G  
Sbjct: 153 KDQGSCGSCWSFSTTGALEGANFLATGELVSLSEQQLVDCDHLCDPEEAGACDSGCNGGL 212

Query: 809 FEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 867
              + EY  Q+ GLE EKDYPY   +G    C +DKSK+        +     + +   L
Sbjct: 213 MTTAYEYVLQSGGLEKEKDYPYTGKDG---TCKFDKSKIAAAVANFSVVSLDEDQIAANL 269

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYW 920
            K+GPLSV +N+  +  Y G         CS  +L H VLLVGYG       +  + PYW
Sbjct: 270 VKHGPLSVGINAVFMQTYIGGV--SCPYICSKRNLDHGVLLVGYGAAGYAPIRFKDKPYW 327

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 955
           +V+NSWG    +EG++KI RGNN CGI+ +    T
Sbjct: 328 IVKNSWGENWGEEGYYKICRGNNICGIDSMVSTVT 362



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 117/342 (34%), Positives = 162/342 (47%), Gaps = 45/342 (13%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 338
           N    F  F  K G+ YA  EE   R   FK +    K+H+       +G ++FSD +P+
Sbjct: 42  NADHHFTLFKSKYGKSYATQEEHDYRLSVFKANLRRAKRHQLLDPSAVHGVTKFSDLTPK 101

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLM-------EVEKDGPVPDAWDWRKKNVTGPA 391
           E           RT+  I        K+ +       E+     +P  +DWR        
Sbjct: 102 EF---------RRTFLGIRKSSSGKRKLKLPADAHAAEILPTSDLPSDFDWRDYGAVTGV 152

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-----GC-GGCDG-- 443
            DQ +CGSCW+FS  G LEG   + TG+LV  S+ QLV+C   C       C  GC+G  
Sbjct: 153 KDQGSCGSCWSFSTTGALEGANFLATGELVSLSEQQLVDCDHLCDPEEAGACDSGCNGGL 212

Query: 444 LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKIL 502
           +    EY  Q+ GLE EKDYPY   +G    C +DKSK+        +     + +   L
Sbjct: 213 MTTAYEYVLQSGGLEKEKDYPYTGKDG---TCKFDKSKIAAAVANFSVVSLDEDQIAANL 269

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-------KQDDIPYW 555
            K+GPLSVG+N+  +  Y G         CS  +L H VLLVGYG       +  D PYW
Sbjct: 270 VKHGPLSVGINAVFMQTYIGGV--SCPYICSKRNLDHGVLLVGYGAAGYAPIRFKDKPYW 327

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQR 597
           + +NSWG    +EG++KI RGNN CGI+ +    T    I++
Sbjct: 328 IVKNSWGENWGEEGYYKICRGNNICGIDSMVSTVTAASTIKQ 369



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/245 (37%), Positives = 125/245 (51%), Gaps = 22/245 (8%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           E+     +P  +DWR         DQ  CGSCW+FS  G LEG   + TG+LV  S+ QL
Sbjct: 130 EILPTSDLPSDFDWRDYGAVTGVKDQGSCGSCWSFSTTGALEGANFLATGELVSLSEQQL 189

Query: 64  VECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKS 113
           V+C   C         SGC+G     + EY  Q+ GLE EKDYPY   +G    C +DKS
Sbjct: 190 VDCDHLCDPEEAGACDSGCNGGLMTTAYEYVLQSGGLEKEKDYPYTGKDG---TCKFDKS 246

Query: 114 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 173
           K+        +     + +   L K+GPLSV +N+  +  Y G         CS  +L H
Sbjct: 247 KIAAAVANFSVVSLDEDQIAANLVKHGPLSVGINAVFMQTYIGGV--SCPYICSKRNLDH 304

Query: 174 AVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            VLLVGYG       +  + PYW+V+NSWG    +EG++KI RGNN CGI+ +    T  
Sbjct: 305 GVLLVGYGAAGYAPIRFKDKPYWIVKNSWGENWGEEGYYKICRGNNICGIDSMVSTVTAA 364

Query: 227 VVIQR 231
             I++
Sbjct: 365 STIKQ 369



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 7/93 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  + GI  +     I  V     CS  +L H VLLVGYG       +  D PYW+V
Sbjct: 270  VKHGPLSVGINAVFMQTYIGGVSCPYICSKRNLDHGVLLVGYGAAGYAPIRFKDKPYWIV 329

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +NSWG    +EG++KI RGNN CGI+ +    T
Sbjct: 330  KNSWGENWGEEGYYKICRGNNICGIDSMVSTVT 362


>gi|347968733|ref|XP_312034.5| AGAP002879-PA [Anopheles gambiae str. PEST]
 gi|333467868|gb|EAA08025.5| AGAP002879-PA [Anopheles gambiae str. PEST]
          Length = 1810

 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 182/354 (51%), Gaps = 33/354 (9%)

Query: 258  PSLTDRITDQVVAR--VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 315
            P+ T   T   V R  V +L I+     D+ ++   F  F     RQYA+  E + RF  
Sbjct: 1469 PAPTPVTTAPAVKRRSVRSLKID-----DDAHVRRMFDKFRHHHRRQYASSMEHEMRFNI 1523

Query: 316  FKQDGHK-----KHER----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 366
            F+ +  K     K ER    YG ++F+D +  E    TG    +      V +R   E+ 
Sbjct: 1524 FRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLVVPKHDRANHVGNRVASEED 1583

Query: 367  LMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 426
            +  V   G +P ++DWR         +Q +CGSCWAFS  G +EG + IKT KL  +S+ 
Sbjct: 1584 VAGV---GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQ 1640

Query: 427  QLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF 484
            +L++C K  +GCGG   D   + IE     GLE E DYPY     +K  C +++S +   
Sbjct: 1641 ELIDCDKVDNGCGGGYMDDAFKAIE--QLGGLELENDYPY-EAKAQK-SCHFNRS-LSHV 1695

Query: 485  TGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLL 543
              K  +    +ET + K L K GP+++GLN++ + FY G         C+   + H VL+
Sbjct: 1696 QVKGAVDMPKNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLI 1755

Query: 544  VGYGKQD------DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
            VGYG ++       +PYW+ +NSWGP   ++G+++I RG+N+CG+ ++A  A +
Sbjct: 1756 VGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASSAIL 1809



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 183/352 (51%), Gaps = 30/352 (8%)

Query: 624  PSLTDRITDQVVAR--VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 681
            P+ T   T   V R  V +L I+     D+ ++   F  F     RQYA+  E + RF  
Sbjct: 1469 PAPTPVTTAPAVKRRSVRSLKID-----DDAHVRRMFDKFRHHHRRQYASSMEHEMRFNI 1523

Query: 682  FKQDGHK-----KHER----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 732
            F+ +  K     K ER    YG ++F+D +  E    TG    +      V +R   E+ 
Sbjct: 1524 FRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLVVPKHDRANHVGNRVASEED 1583

Query: 733  LMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 792
            +  V   G +P ++DWR         +Q +CGSCWAFS  G +EG + IKT KL  +S+ 
Sbjct: 1584 VAGV---GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQ 1640

Query: 793  QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 851
            +L++C K  +GC G + + + +   Q  GLE E DYPY+ A  +K  C +++S +     
Sbjct: 1641 ELIDCDKVDNGCGGGYMDDAFKAIEQLGGLELENDYPYE-AKAQK-SCHFNRS-LSHVQV 1697

Query: 852  KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 910
            K  +    +ET + K L K GP+++ LN++ +  Y G         C+   + H VL+VG
Sbjct: 1698 KGAVDMPKNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLIVG 1757

Query: 911  YGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
            YG ++       +PYW+++NSWGP   ++G+++I RG+N+CG+ ++A  A +
Sbjct: 1758 YGIKEYPMFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASSAIL 1809



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 130/225 (57%), Gaps = 11/225 (4%)

Query: 9    GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
            G +P ++DWR         +Q  CGSCWAFS  G +EG + IKT KL  +S+ +L++C K
Sbjct: 1588 GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQELIDCDK 1647

Query: 69   QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              +GC G + + + +   Q  GLE E DYPY+ A  +K  C +++S +     K  +   
Sbjct: 1648 VDNGCGGGYMDDAFKAIEQLGGLELENDYPYE-AKAQK-SCHFNRS-LSHVQVKGAVDMP 1704

Query: 128  GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 184
             +ET + K L K GP+++ LN++ +  Y G         C+   + H VL+VGYG ++  
Sbjct: 1705 KNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKEYP 1764

Query: 185  ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                 +PYW+++NSWGP   ++G+++I RG+N+CG+ ++A  A +
Sbjct: 1765 MFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASSAIL 1809


>gi|347968731|ref|XP_003436277.1| AGAP002879-PB [Anopheles gambiae str. PEST]
 gi|333467869|gb|EGK96736.1| AGAP002879-PB [Anopheles gambiae str. PEST]
          Length = 1834

 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 182/354 (51%), Gaps = 33/354 (9%)

Query: 258  PSLTDRITDQVVAR--VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 315
            P+ T   T   V R  V +L I+     D+ ++   F  F     RQYA+  E + RF  
Sbjct: 1493 PAPTPVTTAPAVKRRSVRSLKID-----DDAHVRRMFDKFRHHHRRQYASSMEHEMRFNI 1547

Query: 316  FKQDGHK-----KHER----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 366
            F+ +  K     K ER    YG ++F+D +  E    TG    +      V +R   E+ 
Sbjct: 1548 FRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLVVPKHDRANHVGNRVASEED 1607

Query: 367  LMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 426
            +  V   G +P ++DWR         +Q +CGSCWAFS  G +EG + IKT KL  +S+ 
Sbjct: 1608 VAGV---GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQ 1664

Query: 427  QLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF 484
            +L++C K  +GCGG   D   + IE     GLE E DYPY     +K  C +++S +   
Sbjct: 1665 ELIDCDKVDNGCGGGYMDDAFKAIE--QLGGLELENDYPY-EAKAQK-SCHFNRS-LSHV 1719

Query: 485  TGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLL 543
              K  +    +ET + K L K GP+++GLN++ + FY G         C+   + H VL+
Sbjct: 1720 QVKGAVDMPKNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLI 1779

Query: 544  VGYGKQD------DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
            VGYG ++       +PYW+ +NSWGP   ++G+++I RG+N+CG+ ++A  A +
Sbjct: 1780 VGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASSAIL 1833



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 183/352 (51%), Gaps = 30/352 (8%)

Query: 624  PSLTDRITDQVVAR--VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 681
            P+ T   T   V R  V +L I+     D+ ++   F  F     RQYA+  E + RF  
Sbjct: 1493 PAPTPVTTAPAVKRRSVRSLKID-----DDAHVRRMFDKFRHHHRRQYASSMEHEMRFNI 1547

Query: 682  FKQDGHK-----KHER----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 732
            F+ +  K     K ER    YG ++F+D +  E    TG    +      V +R   E+ 
Sbjct: 1548 FRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLVVPKHDRANHVGNRVASEED 1607

Query: 733  LMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 792
            +  V   G +P ++DWR         +Q +CGSCWAFS  G +EG + IKT KL  +S+ 
Sbjct: 1608 VAGV---GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQ 1664

Query: 793  QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 851
            +L++C K  +GC G + + + +   Q  GLE E DYPY+ A  +K  C +++S +     
Sbjct: 1665 ELIDCDKVDNGCGGGYMDDAFKAIEQLGGLELENDYPYE-AKAQK-SCHFNRS-LSHVQV 1721

Query: 852  KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 910
            K  +    +ET + K L K GP+++ LN++ +  Y G         C+   + H VL+VG
Sbjct: 1722 KGAVDMPKNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLIVG 1781

Query: 911  YGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
            YG ++       +PYW+++NSWGP   ++G+++I RG+N+CG+ ++A  A +
Sbjct: 1782 YGIKEYPMFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASSAIL 1833



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 130/225 (57%), Gaps = 11/225 (4%)

Query: 9    GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
            G +P ++DWR         +Q  CGSCWAFS  G +EG + IKT KL  +S+ +L++C K
Sbjct: 1612 GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQELIDCDK 1671

Query: 69   QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              +GC G + + + +   Q  GLE E DYPY+ A  +K  C +++S +     K  +   
Sbjct: 1672 VDNGCGGGYMDDAFKAIEQLGGLELENDYPYE-AKAQK-SCHFNRS-LSHVQVKGAVDMP 1728

Query: 128  GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 184
             +ET + K L K GP+++ LN++ +  Y G         C+   + H VL+VGYG ++  
Sbjct: 1729 KNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKEYP 1788

Query: 185  ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                 +PYW+++NSWGP   ++G+++I RG+N+CG+ ++A  A +
Sbjct: 1789 MFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASSAIL 1833


>gi|633096|dbj|BAA04664.1| prepro NTP [Paragonimus westermani]
          Length = 245

 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 89/216 (41%), Positives = 125/216 (57%), Gaps = 4/216 (1%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P+  DWR K    P  +Q +CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C    
Sbjct: 31  APERMDWRAKGAVTPVENQGECGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDMAA 90

Query: 71  SGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G +   S +E  +  GLESE DYPY    G +  CA +K K+        +     
Sbjct: 91  EGCNGGWPASSYLEIMYMGGLESESDYPYV---GVEQTCALNKEKLVAKIDDSIVLGPEE 147

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           E     L ++GPLS LLN+  +  Y    ++   E C   +L HAVL VGY K+ ++PYW
Sbjct: 148 EDHAAYLAEHGPLSTLLNAVALQYYQSGVLKPTFEECPDTELNHAVLTVGYDKEGDMPYW 207

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 208 IIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 243



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/216 (41%), Positives = 124/216 (57%), Gaps = 4/216 (1%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            P+  DWR K    P  +Q  CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C    
Sbjct: 31  APERMDWRAKGAVTPVENQGECGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDMAA 90

Query: 802 SGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
            GC+G +   S +E  +  GLESE DYPY    G +  CA +K K+        +     
Sbjct: 91  EGCNGGWPASSYLEIMYMGGLESESDYPYV---GVEQTCALNKEKLVAKIDDSIVLGPEE 147

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E     L ++GPLS LLN+  +  Y    ++   E C   +L HAVL VGY K+ ++PYW
Sbjct: 148 EDHAAYLAEHGPLSTLLNAVALQYYQSGVLKPTFEECPDTELNHAVLTVGYDKEGDMPYW 207

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           +++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 208 IIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 243



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 120/216 (55%), Gaps = 3/216 (1%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            P+  DWR K    P  +Q  CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C    
Sbjct: 31  APERMDWRAKGAVTPVENQGECGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDMAA 90

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
            GC G       +E  +  GLESE DYPY    G +  CA +K K+        +     
Sbjct: 91  EGCNGGWPASSYLEIMYMGGLESESDYPYV---GVEQTCALNKEKLVAKIDDSIVLGPEE 147

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           E     L ++GPLS  LN+  + +Y    ++   E C   +L HAVL VGY K+ D+PYW
Sbjct: 148 EDHAAYLAEHGPLSTLLNAVALQYYQSGVLKPTFEECPDTELNHAVLTVGYDKEGDMPYW 207

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           + +NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 208 IIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 243



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 2/100 (2%)

Query: 927  GPIGPDEGFFKIERGNNACGIEQIA-GYATIDVVKND-ETCSPYDLGHAVLLVGYGKQDD 984
            GP   D   +  E G  +  +  +A  Y    V+K   E C   +L HAVL VGY K+ D
Sbjct: 144  GPEEEDHAAYLAEHGPLSTLLNAVALQYYQSGVLKPTFEECPDTELNHAVLTVGYDKEGD 203

Query: 985  IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +PYW+++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 204  MPYWIIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 243


>gi|432091112|gb|ELK24324.1| Cathepsin W [Myotis davidii]
          Length = 370

 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 172/361 (47%), Gaps = 48/361 (13%)

Query: 643 IEGSLTFDNE-----NILETFKAFIVKRGRQYANDEEIKERFEYFKQD-GHKKH------ 690
           IE SL   N       + E F  F ++  R Y+N  E   R + F ++  H +       
Sbjct: 22  IEDSLRVQNPGAGPLELKEVFTLFQIQYNRSYSNPAEYAHRLDIFARNLAHAQRLQEEDL 81

Query: 691 --ERYGTSEFSDRSPEEILCKTGFKWSERTY--ERIVADREKVEKMLMEVEKDGPVPDAW 746
               +G + FSD + EE          ++ Y  +R       V++ +   E    VP   
Sbjct: 82  GTAEFGVTAFSDLTEEEF---------DQLYGNQRAAGRAPNVDREVGSDEWQESVPSTC 132

Query: 747 DWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 805
           DWRK   V  P  DQ  C  CWA + AG +E Q+ IKT + VE S  +L++C +   GC 
Sbjct: 133 DWRKAPGVMSPVKDQKTCSCCWAMAAAGNIEAQWGIKTRQSVEVSVQELLDCGRCGDGCS 192

Query: 806 GCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-M 863
           G F ++  I   + +GL SEKDYP++ A   + KC   K K K+   +DF+  + +E  +
Sbjct: 193 GGFVWDAFITVLNNSGLASEKDYPFQGA--VRAKCQAKKHK-KVAWIQDFIMLSDNEQRI 249

Query: 864 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI------ 917
              L   GP++V +N  L+  Y    I+    TC P ++ H VLLVG+GK  ++      
Sbjct: 250 AWYLATEGPITVTINKKLLQQYQNGVIKATQTTCDPQNVDHVVLLVGFGKTKSVEGRQAK 309

Query: 918 -----------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKNDETCS 966
                      PYW+++NSWG    ++G+F++ RG+NACGI +    A +D      +C 
Sbjct: 310 GVPGHSRRRSTPYWILKNSWGANWGEKGYFRLHRGSNACGITKYPITARVDKPAKKVSCP 369

Query: 967 P 967
           P
Sbjct: 370 P 370



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 164/351 (46%), Gaps = 47/351 (13%)

Query: 277 IEGSLTFDNE-----NILETFKAFIVKRGRQYANDEEIKERFEYFKQD-GHKKH------ 324
           IE SL   N       + E F  F ++  R Y+N  E   R + F ++  H +       
Sbjct: 22  IEDSLRVQNPGAGPLELKEVFTLFQIQYNRSYSNPAEYAHRLDIFARNLAHAQRLQEEDL 81

Query: 325 --ERYGTSEFSDRSPEEILCKTGFKWSERTY--ERIVADREKVEKMLMEVEKDGPVPDAW 380
               +G + FSD + EE          ++ Y  +R       V++ +   E    VP   
Sbjct: 82  GTAEFGVTAFSDLTEEEF---------DQLYGNQRAAGRAPNVDREVGSDEWQESVPSTC 132

Query: 381 DWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCG 439
           DWRK   V  P  DQ  C  CWA + AG +E Q+ IKT + VE S  +L++C +   GC 
Sbjct: 133 DWRKAPGVMSPVKDQKTCSCCWAMAAAGNIEAQWGIKTRQSVEVSVQELLDCGRCGDGCS 192

Query: 440 GCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-M 498
           G    +  I   + +GL SEKDYP++     + KC   K K K+   +DF+  + +E  +
Sbjct: 193 GGFVWDAFITVLNNSGLASEKDYPFQ--GAVRAKCQAKKHK-KVAWIQDFIMLSDNEQRI 249

Query: 499 KKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI------ 552
              L   GP++V +N  L+  Y    I+    TC P ++ H VLLVG+GK   +      
Sbjct: 250 AWYLATEGPITVTINKKLLQQYQNGVIKATQTTCDPQNVDHVVLLVGFGKTKSVEGRQAK 309

Query: 553 -----------PYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
                      PYW+ +NSWG    ++G+F++ RG+NACGI +    A +D
Sbjct: 310 GVPGHSRRRSTPYWILKNSWGANWGEKGYFRLHRGSNACGITKYPITARVD 360



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 127/236 (53%), Gaps = 23/236 (9%)

Query: 11  VPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           VP   DWRK   V  P  DQ  C  CWA + AG +E Q+ IKT + VE S  +L++C + 
Sbjct: 128 VPSTCDWRKAPGVMSPVKDQKTCSCCWAMAAAGNIEAQWGIKTRQSVEVSVQELLDCGRC 187

Query: 70  CSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
             GC G F ++  I   + +GL SEKDYP++ A   + KC   K K K+   +DF+  + 
Sbjct: 188 GDGCSGGFVWDAFITVLNNSGLASEKDYPFQGA--VRAKCQAKKHK-KVAWIQDFIMLSD 244

Query: 129 SET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI- 186
           +E  +   L   GP++V +N  L+  Y    I+    TC P ++ H VLLVG+GK  ++ 
Sbjct: 245 NEQRIAWYLATEGPITVTINKKLLQQYQNGVIKATQTTCDPQNVDHVVLLVGFGKTKSVE 304

Query: 187 ----------------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
                           PYW+++NSWG    ++G+F++ RG+NACGI +    A +D
Sbjct: 305 GRQAKGVPGHSRRRSTPYWILKNSWGANWGEKGYFRLHRGSNACGITKYPITARVD 360



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 17/79 (21%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDI-----------------PYWLVRNSWGPIGPDEGFFKI 1006
            TC P ++ H VLLVG+GK   +                 PYW+++NSWG    ++G+F++
Sbjct: 282  TCDPQNVDHVVLLVGFGKTKSVEGRQAKGVPGHSRRRSTPYWILKNSWGANWGEKGYFRL 341

Query: 1007 ERGNNACGIEQIAGYATID 1025
             RG+NACGI +    A +D
Sbjct: 342  HRGSNACGITKYPITARVD 360


>gi|332376957|gb|AEE63618.1| unknown [Dendroctonus ponderosae]
          Length = 318

 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 156/329 (47%), Gaps = 35/329 (10%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 693
           ++A +  +A+  SL    EN+  TF++F +K  + Y+N  E  +R   F ++     E  
Sbjct: 5   ILASLLIVAVGASL----ENVGSTFQSFKLKHSKSYSNQVEEAKRLAIFTENLRDIEEHN 60

Query: 694 G------------TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
                         ++F+D + +E         S+ T   +   R  ++           
Sbjct: 61  ALYAAGLVSYNKSVNQFTDLTIDEFKAYLTLH-SKPTLNTVPYVRTGLQ----------- 108

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VP   DWR +       DQ  CGSCWAFS+ G  EG Y   TGKLV  S+ QL++C    
Sbjct: 109 VPTTLDWRSQGYVTGVKDQGDCGSCWAFSVVGSTEGAYYKSTGKLVSLSEQQLIDCTTNV 168

Query: 802 S-GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
           + GCDG + E +  Y  Q GL SE  YPY   +G    C   +S V     K ++   G 
Sbjct: 169 NDGCDGGYLEETFPYVQQTGLVSESSYPYTGRDG---NCRISESDVVTKVSK-YVLLGGE 224

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
             + + +   GP+SV +++  I+ Y       +   CS Y L H VL+VGYG QD   YW
Sbjct: 225 ADLLEAVGSVGPVSVAMDATYIYSYASGVYESS--LCSLYSLNHGVLVVGYGTQDGKDYW 282

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIEQ 949
           L++NSWG    ++G+ K+ RG N CGI +
Sbjct: 283 LIKNSWGNTWGEQGYLKLLRGTNECGIAE 311



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 157/333 (47%), Gaps = 42/333 (12%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 327
           ++A +  +A+  SL    EN+  TF++F +K  + Y+N  E  +R   F ++     E  
Sbjct: 5   ILASLLIVAVGASL----ENVGSTFQSFKLKHSKSYSNQVEEAKRLAIFTENLRDIEEHN 60

Query: 328 G------------TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
                         ++F+D + +E         S+ T   +   R  ++           
Sbjct: 61  ALYAAGLVSYNKSVNQFTDLTIDEFKAYLTLH-SKPTLNTVPYVRTGLQ----------- 108

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VP   DWR +       DQ  CGSCWAFS+ G  EG Y   TGKLV  S+ QL++C    
Sbjct: 109 VPTTLDWRSQGYVTGVKDQGDCGSCWAFSVVGSTEGAYYKSTGKLVSLSEQQLIDCTTNV 168

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPY--RNGNGEKFKCAYDKSKVKLFTGKDFLY 491
           +   GCDG  LE+   Y  Q GL SE  YPY  R+GN     C   +S V     K ++ 
Sbjct: 169 ND--GCDGGYLEETFPYVQQTGLVSESSYPYTGRDGN-----CRISESDVVTKVSK-YVL 220

Query: 492 FNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
             G   + + +   GP+SV +++  I+ Y       +   CS Y L H VL+VGYG QD 
Sbjct: 221 LGGEADLLEAVGSVGPVSVAMDATYIYSYASGVYESS--LCSLYSLNHGVLVVGYGTQDG 278

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQ 584
             YWL +NSWG    ++G+ K+ RG N CGI +
Sbjct: 279 KDYWLIKNSWGNTWGEQGYLKLLRGTNECGIAE 311



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 112/209 (53%), Gaps = 7/209 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VP   DWR +       DQ DCGSCWAFS+ G  EG Y   TGKLV  S+ QL++C    
Sbjct: 109 VPTTLDWRSQGYVTGVKDQGDCGSCWAFSVVGSTEGAYYKSTGKLVSLSEQQLIDCTTNV 168

Query: 71  S-GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           + GCDG + E +  Y  Q GL SE  YPY   +G    C   +S V     K ++   G 
Sbjct: 169 NDGCDGGYLEETFPYVQQTGLVSESSYPYTGRDG---NCRISESDVVTKVSK-YVLLGGE 224

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
             + + +   GP+SV +++  I+ Y       +   CS Y L H VL+VGYG QD   YW
Sbjct: 225 ADLLEAVGSVGPVSVAMDATYIYSYASGVYESS--LCSLYSLNHGVLVVGYGTQDGKDYW 282

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           L++NSWG    ++G+ K+ RG N CGI +
Sbjct: 283 LIKNSWGNTWGEQGYLKLLRGTNECGIAE 311


>gi|168059933|ref|XP_001781954.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666600|gb|EDQ53250.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 189/378 (50%), Gaps = 61/378 (16%)

Query: 616 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENIL---ETFKAFIVKRGRQYAND 672
           G+ + L L  +  ++TD V  RVD     GS+      +L   + F++FI + G+ Y   
Sbjct: 18  GLVASLPLRDVIQQVTDGV--RVD-----GSVEQFAHALLGAEKQFESFIKEFGKVYHTV 70

Query: 673 EEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK-TGFKWSERTYERIV 723
           EE + RF+ FK +  +  KH+       +G + FSD + EE   +  G K          
Sbjct: 71  EEYEHRFKVFKSNLLRALKHQALDPTASHGVTMFSDLTEEEFATQYLGLKRPSALSTAPT 130

Query: 724 ADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKT 783
           A          E    G +P ++DWR+K   GP  +Q +CGSCWAFS  G +EG + + T
Sbjct: 131 A----------EPLPTGDLPPSFDWREKGAVGPVKNQGSCGSCWAFSTTGAVEGAHFLAT 180

Query: 784 GKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNAN 833
           GKL+  S+ QLV+C  QC         +GC G     + +Y  +A GLE E DYPYK  +
Sbjct: 181 GKLLSLSEQQLVDCDHQCDPEEAQACDAGCGGGLMTNAYKYVEEAGGLELESDYPYKGRD 240

Query: 834 GEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNG---TP 889
           G   KC ++ +KV      +F +    E  +   L K GPL++ +N++ +  Y      P
Sbjct: 241 G---KCQFNPNKVAAKV-SNFTNIPIDEDQVAAYLIKSGPLAIGINAEFMQTYVAGVSCP 296

Query: 890 IRKNDETCSPYDLGHAVLLVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGN 942
           I      C+  +L H VLLVGY +           PYW+++NSWGP+  D+G++KI RG+
Sbjct: 297 I-----FCNKRNLDHGVLLVGYAEHGFAPARLAYKPYWIIKNSWGPMWGDKGYYKICRGH 351

Query: 943 NACGIEQI--AGYATIDV 958
             CG+  +  A  A +DV
Sbjct: 352 GECGLNTMVSAVAANVDV 369



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 186/378 (49%), Gaps = 60/378 (15%)

Query: 250 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENIL---ETFKAFIVKRGRQYAND 306
           G+ + L L  +  ++TD V  RVD     GS+      +L   + F++FI + G+ Y   
Sbjct: 18  GLVASLPLRDVIQQVTDGV--RVD-----GSVEQFAHALLGAEKQFESFIKEFGKVYHTV 70

Query: 307 EEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK-TGFKWSERTYERIV 357
           EE + RF+ FK +  +  KH+       +G + FSD + EE   +  G K          
Sbjct: 71  EEYEHRFKVFKSNLLRALKHQALDPTASHGVTMFSDLTEEEFATQYLGLKRPSALSTAPT 130

Query: 358 ADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKT 417
           A          E    G +P ++DWR+K   GP  +Q +CGSCWAFS  G +EG + + T
Sbjct: 131 A----------EPLPTGDLPPSFDWREKGAVGPVKNQGSCGSCWAFSTTGAVEGAHFLAT 180

Query: 418 GKLVEFSKSQLVECAKQC---------SGCGGCDGLEQPIEYTHQA-GLESEKDYPYRNG 467
           GKL+  S+ QLV+C  QC         +GCGG   +    +Y  +A GLE E DYPY+  
Sbjct: 181 GKLLSLSEQQLVDCDHQCDPEEAQACDAGCGG-GLMTNAYKYVEEAGGLELESDYPYKGR 239

Query: 468 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG---TP 524
           +G   KC ++ +KV              + +   L K GPL++G+N+  +  Y      P
Sbjct: 240 DG---KCQFNPNKVAAKVSNFTNIPIDEDQVAAYLIKSGPLAIGINAEFMQTYVAGVSCP 296

Query: 525 IRKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLARNSWGPIGPDEGFFKIERGN 577
           I      C+  +L H VLLVGY +           PYW+ +NSWGP+  D+G++KI RG+
Sbjct: 297 I-----FCNKRNLDHGVLLVGYAEHGFAPARLAYKPYWIIKNSWGPMWGDKGYYKICRGH 351

Query: 578 NACGIEQI--AGYATIDV 593
             CG+  +  A  A +DV
Sbjct: 352 GECGLNTMVSAVAANVDV 369



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 132/242 (54%), Gaps = 32/242 (13%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P ++DWR+K   GP  +Q  CGSCWAFS  G +EG + + TGKL+  S+ QLV+C  
Sbjct: 137 GDLPPSFDWREKGAVGPVKNQGSCGSCWAFSTTGAVEGAHFLATGKLLSLSEQQLVDCDH 196

Query: 69  QC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
           QC         +GC G     + +Y  +A GLE E DYPYK  +G   KC ++ +KV   
Sbjct: 197 QCDPEEAQACDAGCGGGLMTNAYKYVEEAGGLELESDYPYKGRDG---KCQFNPNKVAAK 253

Query: 119 TGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHA 174
              +F +    E  +   L K GPL++ +N++ +  Y      PI      C+  +L H 
Sbjct: 254 V-SNFTNIPIDEDQVAAYLIKSGPLAIGINAEFMQTYVAGVSCPI-----FCNKRNLDHG 307

Query: 175 VLLVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI--AGYATI 225
           VLLVGY +           PYW+++NSWGP+  D+G++KI RG+  CG+  +  A  A +
Sbjct: 308 VLLVGYAEHGFAPARLAYKPYWIIKNSWGPMWGDKGYYKICRGHGECGLNTMVSAVAANV 367

Query: 226 DV 227
           DV
Sbjct: 368 DV 369


>gi|116786550|gb|ABK24153.1| unknown [Picea sitchensis]
          Length = 394

 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 166/331 (50%), Gaps = 37/331 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           F  F+ K  ++Y+  EE   RF  FK++ HK  +H++      +G ++FSD + EE   +
Sbjct: 75  FAHFVKKFNKEYSGAEEHARRFSIFKKNLHKALRHQKLDRDAIHGINKFSDLTEEEFHEQ 134

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                   T  R ++ R +   +L   +    +P  +DWR+     P  +Q ACGSCW F
Sbjct: 135 ---YLGLTTPPRSLSQRTQPAPILPTDD----LPPDFDWRELGAVTPVKNQGACGSCWTF 187

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G +EG   +KTGKL+  S+ QLV+C  +C         SGC+G     + +Y  +A 
Sbjct: 188 STTGAMEGANFMKTGKLISLSEQQLVDCDHECDSSEPDVCDSGCNGGLMTTAYQYALKAG 247

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL+ E+DYPY   +G    C +D +KV              + +   L K GPL+V +N+
Sbjct: 248 GLQREEDYPYTGIDG---SCKFDNTKVAAMVANFSTVSIDEDQIAANLVKNGPLAVGINA 304

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY-------GKQDNIPYWLVRNSWGPIGPD 932
             +  Y G         C+  +L H VLLVGY       G+  N P+W+++NSWGP   +
Sbjct: 305 AFMQTYVGG--VSCPYVCNKQNLDHGVLLVGYGAAGYAPGRLKNKPFWIIKNSWGPDWGE 362

Query: 933 EGFFKIERGNNACGIEQIAGYATIDVVKNDE 963
           +G++K+ RG+N CGI  +        ++ D+
Sbjct: 363 DGYYKLCRGHNVCGINTMVSTVAAANIQTDD 393



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 161/318 (50%), Gaps = 36/318 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           F  F+ K  ++Y+  EE   RF  FK++ HK  +H++      +G ++FSD + EE   +
Sbjct: 75  FAHFVKKFNKEYSGAEEHARRFSIFKKNLHKALRHQKLDRDAIHGINKFSDLTEEEFHEQ 134

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                   T  R ++ R +   +L   +    +P  +DWR+     P  +Q ACGSCW F
Sbjct: 135 ---YLGLTTPPRSLSQRTQPAPILPTDD----LPPDFDWRELGAVTPVKNQGACGSCWTF 187

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC------GGCDG--LEQPIEYTHQA- 454
           S  G +EG   +KTGKL+  S+ QLV+C  +C          GC+G  +    +Y  +A 
Sbjct: 188 STTGAMEGANFMKTGKLISLSEQQLVDCDHECDSSEPDVCDSGCNGGLMTTAYQYALKAG 247

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL+ E+DYPY   +G    C +D +KV              + +   L K GPL+VG+N+
Sbjct: 248 GLQREEDYPYTGIDG---SCKFDNTKVAAMVANFSTVSIDEDQIAANLVKNGPLAVGINA 304

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGY-------GKQDDIPYWLARNSWGPIGPD 567
             +  Y G         C+  +L H VLLVGY       G+  + P+W+ +NSWGP   +
Sbjct: 305 AFMQTYVGG--VSCPYVCNKQNLDHGVLLVGYGAAGYAPGRLKNKPFWIIKNSWGPDWGE 362

Query: 568 EGFFKIERGNNACGIEQI 585
           +G++K+ RG+N CGI  +
Sbjct: 363 DGYYKLCRGHNVCGINTM 380



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 119/226 (52%), Gaps = 22/226 (9%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+     P  +Q  CGSCW FS  G +EG   +KTGKL+  S+ QLV+C  +C
Sbjct: 160 LPPDFDWRELGAVTPVKNQGACGSCWTFSTTGAMEGANFMKTGKLISLSEQQLVDCDHEC 219

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + +Y  +A GL+ E+DYPY   +G    C +D +KV     
Sbjct: 220 DSSEPDVCDSGCNGGLMTTAYQYALKAGGLQREEDYPYTGIDG---SCKFDNTKVAAMVA 276

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
                    + +   L K GPL+V +N+  +  Y G         C+  +L H VLLVGY
Sbjct: 277 NFSTVSIDEDQIAANLVKNGPLAVGINAAFMQTYVGG--VSCPYVCNKQNLDHGVLLVGY 334

Query: 181 -------GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
                  G+  N P+W+++NSWGP   ++G++K+ RG+N CGI  +
Sbjct: 335 GAAGYAPGRLKNKPFWIIKNSWGPDWGEDGYYKLCRGHNVCGINTM 380


>gi|186688051|gb|ACC86111.1| cathepsin F [Paralichthys olivaceus]
          Length = 475

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 163/347 (46%), Gaps = 25/347 (7%)

Query: 256 CLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 315
           C P +  ++ +     V+ L+I   L  ++  +L  FK F+VK  + Y++ +E   R   
Sbjct: 144 CQPKVEFQVKE--TNEVEDLSINPPLE-ESVELLGQFKEFMVKYNKVYSSQDEADRRLSI 200

Query: 316 FK---------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK- 365
           F          Q   +    YG ++FSD + EE            TY   +  +  + + 
Sbjct: 201 FHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEF---------RSTYLNPLLSQWTLHRP 251

Query: 366 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 425
           M       GP P +WDWR         +Q  CGSCWAFS+ G +EGQ+ +K G LV  S+
Sbjct: 252 MKPASPAKGPAPASWDWRDHGAVSSVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLVSLSE 311

Query: 426 SQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFT 485
            +LV+C      C G              GLE+E DY Y    G+K  C +   KV  + 
Sbjct: 312 QELVDCDGLDQACNGGLPSNAYEAIEKLGGLETETDYSYI---GKKQSCDFATKKVAAYI 368

Query: 486 GKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVG 545
                     + +   L + GP+SV LN+  + FY           C+P+ + HAVL+VG
Sbjct: 369 NSSVELSKDEKEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLMVG 428

Query: 546 YGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           YG++  IP+W  +NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 429 YGERKGIPFWAIKNSWGEDYGEQGYYYLHRGSNACGINKMCSSAVVN 475



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 167/347 (48%), Gaps = 26/347 (7%)

Query: 622 CLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 681
           C P +  ++ +     V+ L+I   L  ++  +L  FK F+VK  + Y++ +E   R   
Sbjct: 144 CQPKVEFQVKE--TNEVEDLSINPPLE-ESVELLGQFKEFMVKYNKVYSSQDEADRRLSI 200

Query: 682 FK---------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK- 731
           F          Q   +    YG ++FSD + EE            TY   +  +  + + 
Sbjct: 201 FHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEF---------RSTYLNPLLSQWTLHRP 251

Query: 732 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 791
           M       GP P +WDWR         +Q  CGSCWAFS+ G +EGQ+ +K G LV  S+
Sbjct: 252 MKPASPAKGPAPASWDWRDHGAVSSVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLVSLSE 311

Query: 792 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 850
            +LV+C      C+G     + E   +  GLE+E DY Y    G+K  C +   KV  + 
Sbjct: 312 QELVDCDGLDQACNGGLPSNAYEAIEKLGGLETETDYSYI---GKKQSCDFATKKVAAYI 368

Query: 851 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 910
                     + +   L + GP+SV LN+  +  Y           C+P+ + HAVL+VG
Sbjct: 369 NSSVELSKDEKEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLMVG 428

Query: 911 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           YG++  IP+W ++NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 429 YGERKGIPFWAIKNSWGEDYGEQGYYYLHRGSNACGINKMCSSAVVN 475



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 118/219 (53%), Gaps = 4/219 (1%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           GP P +WDWR         +Q  CGSCWAFS+ G +EGQ+ +K G LV  S+ +LV+C  
Sbjct: 260 GPAPASWDWRDHGAVSSVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLVSLSEQELVDCDG 319

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
               C+G     + E   +  GLE+E DY Y    G+K  C +   KV  +         
Sbjct: 320 LDQACNGGLPSNAYEAIEKLGGLETETDYSYI---GKKQSCDFATKKVAAYINSSVELSK 376

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L + GP+SV LN+  +  Y           C+P+ + HAVL+VGYG++  IP
Sbjct: 377 DEKEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLMVGYGERKGIP 436

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 437 FWAIKNSWGEDYGEQGYYYLHRGSNACGINKMCSSAVVN 475



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 45/61 (73%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVL+VGYG++  IP+W ++NSWG    ++G++ + RG+NACGI ++   A +
Sbjct: 415  CNPWMIDHAVLMVGYGERKGIPFWAIKNSWGEDYGEQGYYYLHRGSNACGINKMCSSAVV 474

Query: 1025 D 1025
            +
Sbjct: 475  N 475


>gi|339244639|ref|XP_003378245.1| cathepsin F [Trichinella spiralis]
 gi|316972864|gb|EFV56510.1| cathepsin F [Trichinella spiralis]
          Length = 366

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 171/376 (45%), Gaps = 43/376 (11%)

Query: 244 AVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENIL-------------- 289
            VFL C       LP    R    +   V+ L       FD   +L              
Sbjct: 7   TVFLFCLFYCTWALPMKQKR---PLFTNVNHLERYMDSKFDKNLLLKLLPEMNAKEARSW 63

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEI 340
           E FK F+V+  + Y  ++   E++  FK         Q+  +    YG + F+D +PEE 
Sbjct: 64  ENFKQFMVEFNKWYETEKLTAEKYNIFKSNMVIAKRLQEEEQGTAIYGPTIFADMTPEEF 123

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
                     +T+     +  K  K +  + K   + +  DWRK N      DQ  CGSC
Sbjct: 124 ---------RKTHLNFNPNNVKKPKRMANIPKSN-ISERMDWRKFNAVTSVKDQGNCGSC 173

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEK 460
           WAF     +EG +A+KT +L+  S+ QLV+C +   GC G   +   +E     GLE E+
Sbjct: 174 WAFCTVANIEGAWAVKTAQLISLSEQQLVDCDRLDDGCEGGLPVNAYLEIIRLGGLEKEE 233

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY 520
           DY Y   +G   KC ++ +K  ++     +     + + + + + GP++VGLN+  + FY
Sbjct: 234 DYKYTARSG---KCKFNHTKSAVYINDTVVLPEDEDAIARYVSENGPVAVGLNADAMMFY 290

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI----PYWLARNSWGPIGPDEGFFKIERG 576
                  +   CSP  + H V +VGY  ++ +    PYW+ +NSWGP   ++G++ + RG
Sbjct: 291 RSGIAHPSRLMCSPDGINHGVTIVGYDVKESLFWSTPYWIIKNSWGPNWGEKGYYYLYRG 350

Query: 577 NNACGIEQIAGYATID 592
              CGI+Q+A    ID
Sbjct: 351 KGVCGIDQMASSVVID 366



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 172/376 (45%), Gaps = 44/376 (11%)

Query: 610 AVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENIL-------------- 655
            VFL C       LP    R    +   V+ L       FD   +L              
Sbjct: 7   TVFLFCLFYCTWALPMKQKR---PLFTNVNHLERYMDSKFDKNLLLKLLPEMNAKEARSW 63

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEI 706
           E FK F+V+  + Y  ++   E++  FK         Q+  +    YG + F+D +PEE 
Sbjct: 64  ENFKQFMVEFNKWYETEKLTAEKYNIFKSNMVIAKRLQEEEQGTAIYGPTIFADMTPEEF 123

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
                     +T+     +  K  K +  + K   + +  DWRK N      DQ  CGSC
Sbjct: 124 ---------RKTHLNFNPNNVKKPKRMANIPKSN-ISERMDWRKFNAVTSVKDQGNCGSC 173

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEK 825
           WAF     +EG +A+KT +L+  S+ QLV+C +   GC+G       +E     GLE E+
Sbjct: 174 WAFCTVANIEGAWAVKTAQLISLSEQQLVDCDRLDDGCEGGLPVNAYLEIIRLGGLEKEE 233

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DY Y   +G   KC ++ +K  ++     +     + + + + + GP++V LN+D +  Y
Sbjct: 234 DYKYTARSG---KCKFNHTKSAVYINDTVVLPEDEDAIARYVSENGPVAVGLNADAMMFY 290

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI----PYWLVRNSWGPIGPDEGFFKIERG 941
                  +   CSP  + H V +VGY  ++++    PYW+++NSWGP   ++G++ + RG
Sbjct: 291 RSGIAHPSRLMCSPDGINHGVTIVGYDVKESLFWSTPYWIIKNSWGPNWGEKGYYYLYRG 350

Query: 942 NNACGIEQIAGYATID 957
              CGI+Q+A    ID
Sbjct: 351 KGVCGIDQMASSVVID 366



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 120/221 (54%), Gaps = 8/221 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           + +  DWRK N      DQ +CGSCWAF     +EG +A+KT +L+  S+ QLV+C +  
Sbjct: 149 ISERMDWRKFNAVTSVKDQGNCGSCWAFCTVANIEGAWAVKTAQLISLSEQQLVDCDRLD 208

Query: 71  SGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G       +E     GLE E+DY Y   +G   KC ++ +K  ++     +     
Sbjct: 209 DGCEGGLPVNAYLEIIRLGGLEKEEDYKYTARSG---KCKFNHTKSAVYINDTVVLPEDE 265

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI--- 186
           + + + + + GP++V LN+D +  Y       +   CSP  + H V +VGY  ++++   
Sbjct: 266 DAIARYVSENGPVAVGLNADAMMFYRSGIAHPSRLMCSPDGINHGVTIVGYDVKESLFWS 325

Query: 187 -PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            PYW+++NSWGP   ++G++ + RG   CGI+Q+A    ID
Sbjct: 326 TPYWIIKNSWGPNWGEKGYYYLYRGKGVCGIDQMASSVVID 366



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 965  CSPYDLGHAVLLVGYGKQDDI----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 1020
            CSP  + H V +VGY  ++ +    PYW+++NSWGP   ++G++ + RG   CGI+Q+A 
Sbjct: 302  CSPDGINHGVTIVGYDVKESLFWSTPYWIIKNSWGPNWGEKGYYYLYRGKGVCGIDQMAS 361

Query: 1021 YATID 1025
               ID
Sbjct: 362  SVVID 366


>gi|224555777|gb|ACN56478.1| cathepsin F [Paralichthys olivaceus]
          Length = 475

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 163/347 (46%), Gaps = 25/347 (7%)

Query: 256 CLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 315
           C P +  ++ +     V+ L+I   L  ++  +L  FK F+VK  + Y++ +E   R   
Sbjct: 144 CQPKVEFQVKE--TNEVEDLSINPPLE-ESVELLGQFKEFMVKYNKVYSSQDEADRRLSI 200

Query: 316 FK---------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK- 365
           F          Q   +    YG ++FSD + EE            TY   +  +  + + 
Sbjct: 201 FHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEF---------RSTYLNPLLSQWTLHRP 251

Query: 366 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 425
           M       GP P +WDWR         +Q  CGSCWAFS+ G +EGQ+ +K G LV  S+
Sbjct: 252 MKPASPAKGPAPASWDWRDHGAVSSVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLVSLSE 311

Query: 426 SQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFT 485
            +LV+C      C G              GLE+E DY Y    G+K  C +   KV  + 
Sbjct: 312 QELVDCDGLDQACNGGLPSNAYEAIEKLGGLETETDYSYI---GKKQSCDFATKKVAAYI 368

Query: 486 GKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVG 545
                     + +   L + GP+SV LN+  + FY           C+P+ + HAVL+VG
Sbjct: 369 NSSVELSKDEKEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLMVG 428

Query: 546 YGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           YG++  IP+W  +NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 429 YGERKGIPFWAIKNSWGEDYGEQGYYNLYRGSNACGINKMCSSAVVN 475



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 167/347 (48%), Gaps = 26/347 (7%)

Query: 622 CLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 681
           C P +  ++ +     V+ L+I   L  ++  +L  FK F+VK  + Y++ +E   R   
Sbjct: 144 CQPKVEFQVKE--TNEVEDLSINPPLE-ESVELLGQFKEFMVKYNKVYSSQDEADRRLSI 200

Query: 682 FK---------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK- 731
           F          Q   +    YG ++FSD + EE            TY   +  +  + + 
Sbjct: 201 FHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEF---------RSTYLNPLLSQWTLHRP 251

Query: 732 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 791
           M       GP P +WDWR         +Q  CGSCWAFS+ G +EGQ+ +K G LV  S+
Sbjct: 252 MKPASPAKGPAPASWDWRDHGAVSSVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLVSLSE 311

Query: 792 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 850
            +LV+C      C+G     + E   +  GLE+E DY Y    G+K  C +   KV  + 
Sbjct: 312 QELVDCDGLDQACNGGLPSNAYEAIEKLGGLETETDYSYI---GKKQSCDFATKKVAAYI 368

Query: 851 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 910
                     + +   L + GP+SV LN+  +  Y           C+P+ + HAVL+VG
Sbjct: 369 NSSVELSKDEKEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLMVG 428

Query: 911 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           YG++  IP+W ++NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 429 YGERKGIPFWAIKNSWGEDYGEQGYYNLYRGSNACGINKMCSSAVVN 475



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 118/219 (53%), Gaps = 4/219 (1%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           GP P +WDWR         +Q  CGSCWAFS+ G +EGQ+ +K G LV  S+ +LV+C  
Sbjct: 260 GPAPASWDWRDHGAVSSVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLVSLSEQELVDCDG 319

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
               C+G     + E   +  GLE+E DY Y    G+K  C +   KV  +         
Sbjct: 320 LDQACNGGLPSNAYEAIEKLGGLETETDYSYI---GKKQSCDFATKKVAAYINSSVELSK 376

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L + GP+SV LN+  +  Y           C+P+ + HAVL+VGYG++  IP
Sbjct: 377 DEKEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLMVGYGERKGIP 436

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 437 FWAIKNSWGEDYGEQGYYNLYRGSNACGINKMCSSAVVN 475



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 45/61 (73%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVL+VGYG++  IP+W ++NSWG    ++G++ + RG+NACGI ++   A +
Sbjct: 415  CNPWMIDHAVLMVGYGERKGIPFWAIKNSWGEDYGEQGYYNLYRGSNACGINKMCSSAVV 474

Query: 1025 D 1025
            +
Sbjct: 475  N 475


>gi|296218871|ref|XP_002755611.1| PREDICTED: cathepsin F [Callithrix jacchus]
          Length = 489

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 164/353 (46%), Gaps = 25/353 (7%)

Query: 250 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEE 308
           G  S L  P L +R  ++  + V +L  E  L  D    +   F+ F++   R Y + EE
Sbjct: 152 GTISSLSQPRLDNR--NETFSPVFSLLNEDPLPQDLAVKMASIFRNFVITYNRTYESKEE 209

Query: 309 IKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVAD 359
            + R   F  +  +  +         +YG ++FSD + EE           RT       
Sbjct: 210 AQWRLSVFVHNMVRAQKIQALDRGTAQYGVTKFSDLTEEEF----------RTTYLNPLL 259

Query: 360 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 419
           RE  +KM          P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G 
Sbjct: 260 REPGKKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGT 319

Query: 420 LVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS 479
           L+  S+ +L++C K    C G           +  GLE+E DY YR   G    C +   
Sbjct: 320 LLSLSEQELLDCDKIDKACMGGLPSSAYSAIKNLGGLETEDDYSYR---GHMQACNFSPE 376

Query: 480 KVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGH 539
           K K++           + +   L K GP+SV +N+  + FY     R     CSP+ + H
Sbjct: 377 KAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDH 436

Query: 540 AVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           AVLLVGYG + D+P+W  +NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 437 AVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 489



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 168/355 (47%), Gaps = 30/355 (8%)

Query: 616 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEE 674
           G  S L  P L +R  ++  + V +L  E  L  D    +   F+ F++   R Y + EE
Sbjct: 152 GTISSLSQPRLDNR--NETFSPVFSLLNEDPLPQDLAVKMASIFRNFVITYNRTYESKEE 209

Query: 675 IKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVAD 725
            + R   F  +  +  +         +YG ++FSD + EE           RT       
Sbjct: 210 AQWRLSVFVHNMVRAQKIQALDRGTAQYGVTKFSDLTEEEF----------RTTYLNPLL 259

Query: 726 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 785
           RE  +KM          P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G 
Sbjct: 260 REPGKKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGT 319

Query: 786 LVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYD 842
           L+  S+ +L++C K    C G    PS  Y+   +  GLE+E DY Y+   G    C + 
Sbjct: 320 LLSLSEQELLDCDKIDKACMGGL--PSSAYSAIKNLGGLETEDDYSYR---GHMQACNFS 374

Query: 843 KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDL 902
             K K++           + +   L K GP+SV +N+  +  Y     R     CSP+ +
Sbjct: 375 PEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLI 434

Query: 903 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
            HAVLLVGYG + ++P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 435 DHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 489



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 276 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKID 335

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 336 KACMGGL--PSSAYSAIKNLGGLETEDDYSYR---GHMQACNFSPEKAKVYINDSVELSQ 390

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 391 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 450

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 451 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 489



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 429  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 488

Query: 1025 D 1025
            D
Sbjct: 489  D 489


>gi|196014793|ref|XP_002117255.1| hypothetical protein TRIADDRAFT_61245 [Trichoplax adhaerens]
 gi|190580220|gb|EDV20305.1| hypothetical protein TRIADDRAFT_61245 [Trichoplax adhaerens]
          Length = 353

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 163/319 (51%), Gaps = 32/319 (10%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHE----RYGTSEFSDRSPE 338
           + + +  FI +  + Y N +E+  R++ F ++  +     KH+    RYG ++ SD + +
Sbjct: 51  MFKNYLQFIKEYNKSYNNIQELNYRYQVFTKNMARAMLFQKHDNATGRYGFTKLSDLTDQ 110

Query: 339 EILCKTGFK-WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E+      K W ++ Y    A+  ++  +          P ++DWR K       DQ  C
Sbjct: 111 EVKSFYAMKKWPQQLYPTKKANIPQLNSL----------PQSFDWRSKGAVTAVKDQKRC 160

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---- 453
           G+CWAF+  G +EGQ+ +  GKL   S+ +LV+C K   GC G  GL  P+   H     
Sbjct: 161 GACWAFATTGNIEGQWYLNKGKLYSLSEQELVDCDKIDEGCKG--GL--PLNAYHSIMNR 216

Query: 454 -AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             GLE+EKDYPY   NG   KC  +KS+  ++             +   L  +GP+++G+
Sbjct: 217 LGGLETEKDYPYVAKNG---KCKLNKSEEVVYINSSVKVSTNETDLAAWLVAHGPVAIGI 273

Query: 513 NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           NS  +  Y G      ++ C+P  L H VL+VGYG++   PYW+ +NSWG    ++G+++
Sbjct: 274 NSVNMLHYKGGIAHPTNKDCNPKLLDHGVLIVGYGEEKSTPYWIIKNSWGTDWGEKGYYR 333

Query: 573 IERGNNACGIEQIAGYATI 591
           + RG  ACG+ + A  A +
Sbjct: 334 VVRGIGACGLNKSATSAIV 352



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 161/317 (50%), Gaps = 29/317 (9%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHE----RYGTSEFSDRSPE 704
           + + +  FI +  + Y N +E+  R++ F ++  +     KH+    RYG ++ SD + +
Sbjct: 51  MFKNYLQFIKEYNKSYNNIQELNYRYQVFTKNMARAMLFQKHDNATGRYGFTKLSDLTDQ 110

Query: 705 EILCKTGFK-WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E+      K W ++ Y    A+  ++  +          P ++DWR K       DQ  C
Sbjct: 111 EVKSFYAMKKWPQQLYPTKKANIPQLNSL----------PQSFDWRSKGAVTAVKDQKRC 160

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY----THQA 819
           G+CWAF+  G +EGQ+ +  GKL   S+ +LV+C K   GC G    P   Y        
Sbjct: 161 GACWAFATTGNIEGQWYLNKGKLYSLSEQELVDCDKIDEGCKGGL--PLNAYHSIMNRLG 218

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GLE+EKDYPY   NG   KC  +KS+  ++             +   L  +GP+++ +NS
Sbjct: 219 GLETEKDYPYVAKNG---KCKLNKSEEVVYINSSVKVSTNETDLAAWLVAHGPVAIGINS 275

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
             +  Y G      ++ C+P  L H VL+VGYG++ + PYW+++NSWG    ++G++++ 
Sbjct: 276 VNMLHYKGGIAHPTNKDCNPKLLDHGVLIVGYGEEKSTPYWIIKNSWGTDWGEKGYYRVV 335

Query: 940 RGNNACGIEQIAGYATI 956
           RG  ACG+ + A  A +
Sbjct: 336 RGIGACGLNKSATSAIV 352



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 119/219 (54%), Gaps = 9/219 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P ++DWR K       DQ  CG+CWAF+  G +EGQ+ +  GKL   S+ +LV+C K  
Sbjct: 139 LPQSFDWRSKGAVTAVKDQKRCGACWAFATTGNIEGQWYLNKGKLYSLSEQELVDCDKID 198

Query: 71  SGCDGCFFEPSIEY----THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
            GC G    P   Y        GLE+EKDYPY   NG   KC  +KS+  ++        
Sbjct: 199 EGCKGGL--PLNAYHSIMNRLGGLETEKDYPYVAKNG---KCKLNKSEEVVYINSSVKVS 253

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
                +   L  +GP+++ +NS  +  Y G      ++ C+P  L H VL+VGYG++ + 
Sbjct: 254 TNETDLAAWLVAHGPVAIGINSVNMLHYKGGIAHPTNKDCNPKLLDHGVLIVGYGEEKST 313

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           PYW+++NSWG    ++G++++ RG  ACG+ + A  A +
Sbjct: 314 PYWIIKNSWGTDWGEKGYYRVVRGIGACGLNKSATSAIV 352



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 43/63 (68%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            ++ C+P  L H VL+VGYG++   PYW+++NSWG    ++G++++ RG  ACG+ + A  
Sbjct: 290  NKDCNPKLLDHGVLIVGYGEEKSTPYWIIKNSWGTDWGEKGYYRVVRGIGACGLNKSATS 349

Query: 1022 ATI 1024
            A +
Sbjct: 350  AIV 352


>gi|344295816|ref|XP_003419606.1| PREDICTED: cathepsin F [Loxodonta africana]
          Length = 473

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 148/314 (47%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F+    R Y   EE K R   F  +  +  +         +YG ++FSD + E
Sbjct: 172 MASIFKNFVTTYNRTYETKEETKWRMSVFANNMIRAQKLQALDQGTAQYGITKFSDLTEE 231

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +   +  +KM +     GPVP  WDWR K       DQ  CG
Sbjct: 232 EF---------RTIYLNPLLREDPGQKMRLGKAPKGPVPPDWDWRTKGAVTKVKDQGMCG 282

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G              GLE+
Sbjct: 283 SCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACMGGVPSNAYSAIKTLGGLET 342

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E+DY Y   +G    C++   K K++             +   L K GP+SV +N+  + 
Sbjct: 343 EEDYSY---HGHLQACSFSAEKAKVYINDSVELSQNEYKLAAWLAKNGPISVAINAFGMQ 399

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY           CSP+ + HAVL+VGYG + D+P+W  +NSWG    +EG++ + RG+ 
Sbjct: 400 FYRHGIAHPLRPLCSPWLIDHAVLIVGYGNRSDVPFWAIKNSWGTDWGEEGYYYLHRGSG 459

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A +D
Sbjct: 460 ACGVNTMASSAVVD 473



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 152/316 (48%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F+    R Y   EE K R   F  +  +  +         +YG ++FSD + E
Sbjct: 172 MASIFKNFVTTYNRTYETKEETKWRMSVFANNMIRAQKLQALDQGTAQYGITKFSDLTEE 231

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +   +  +KM +     GPVP  WDWR K       DQ  CG
Sbjct: 232 EF---------RTIYLNPLLREDPGQKMRLGKAPKGPVPPDWDWRTKGAVTKVKDQGMCG 282

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+      GL
Sbjct: 283 SCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACMGGV--PSNAYSAIKTLGGL 340

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E+DY Y   +G    C++   K K++             +   L K GP+SV +N+  
Sbjct: 341 ETEEDYSY---HGHLQACSFSAEKAKVYINDSVELSQNEYKLAAWLAKNGPISVAINAFG 397

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y           CSP+ + HAVL+VGYG + ++P+W ++NSWG    +EG++ + RG
Sbjct: 398 MQFYRHGIAHPLRPLCSPWLIDHAVLIVGYGNRSDVPFWAIKNSWGTDWGEEGYYYLHRG 457

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A +D
Sbjct: 458 SGACGVNTMASSAVVD 473



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 119/221 (53%), Gaps = 8/221 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           GPVP  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K
Sbjct: 258 GPVPPDWDWRTKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDK 317

Query: 69  QCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
               C G    PS  Y+      GLE+E+DY Y   +G    C++   K K++       
Sbjct: 318 VDKACMGGV--PSNAYSAIKTLGGLETEEDYSY---HGHLQACSFSAEKAKVYINDSVEL 372

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
                 +   L K GP+SV +N+  +  Y           CSP+ + HAVL+VGYG + +
Sbjct: 373 SQNEYKLAAWLAKNGPISVAINAFGMQFYRHGIAHPLRPLCSPWLIDHAVLIVGYGNRSD 432

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +D
Sbjct: 433 VPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVVD 473



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVL+VGYG + D+P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 413  CSPWLIDHAVLIVGYGNRSDVPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVV 472

Query: 1025 D 1025
            D
Sbjct: 473  D 473


>gi|443696723|gb|ELT97360.1| hypothetical protein CAPTEDRAFT_147978 [Capitella teleta]
          Length = 274

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/278 (35%), Positives = 150/278 (53%), Gaps = 16/278 (5%)

Query: 318 QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
           Q+  +    YG S F+D + EE      F+ +  +    V     ++   + +E     P
Sbjct: 8   QEKEQGDATYGASPFADLTAEE------FRKNYLSPVWNVTHDPFLKPASIPIETP---P 58

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
           DA+DWR  +   P  +Q +CGSCWAFS+ G +EGQ+AI+  KL+  S+ +LV+C K   G
Sbjct: 59  DAFDWRDHDAVTPVKNQGSCGSCWAFSVTGNVEGQWAIQKKKLLSLSEQELVDCDKVDLG 118

Query: 438 CGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET 497
           C G   L+   E     GLE+EKDYPY    G+  KC ++K++V++         +  + 
Sbjct: 119 CNGGLPLQAYKEIMRIGGLETEKDYPYE---GKGDKCVFEKAEVEVNITGAVNISSNEDD 175

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQ---DDIP 553
           MK  L+K GP+S+GLN++ + FY G         CSP  L H VL+ GYG KQ    D P
Sbjct: 176 MKAWLWKNGPISIGLNANAMQFYMGGVSHPFSFLCSPSSLDHGVLITGYGIKQGWMSDSP 235

Query: 554 YWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           +W  +NSWG    ++G++ + RG   CG+ Q+   AT+
Sbjct: 236 FWAIKNSWGESWGEKGYYLLYRGAGVCGVNQMPTSATV 273



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 153/279 (54%), Gaps = 19/279 (6%)

Query: 684 QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
           Q+  +    YG S F+D + EE      F+ +  +    V     ++   + +E     P
Sbjct: 8   QEKEQGDATYGASPFADLTAEE------FRKNYLSPVWNVTHDPFLKPASIPIETP---P 58

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
           DA+DWR  +   P  +Q +CGSCWAFS+ G +EGQ+AI+  KL+  S+ +LV+C K   G
Sbjct: 59  DAFDWRDHDAVTPVKNQGSCGSCWAFSVTGNVEGQWAIQKKKLLSLSEQELVDCDKVDLG 118

Query: 804 CDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSE 861
           C+G    +   E     GLE+EKDYPY+   G+  KC ++K++V++  TG   +  N  +
Sbjct: 119 CNGGLPLQAYKEIMRIGGLETEKDYPYE---GKGDKCVFEKAEVEVNITGAVNISSN-ED 174

Query: 862 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQ---DNI 917
            MK  L+K GP+S+ LN++ +  Y G         CSP  L H VL+ GYG KQ    + 
Sbjct: 175 DMKAWLWKNGPISIGLNANAMQFYMGGVSHPFSFLCSPSSLDHGVLITGYGIKQGWMSDS 234

Query: 918 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           P+W ++NSWG    ++G++ + RG   CG+ Q+   AT+
Sbjct: 235 PFWAIKNSWGESWGEKGYYLLYRGAGVCGVNQMPTSATV 273



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 130/220 (59%), Gaps = 10/220 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           PDA+DWR  +   P  +Q  CGSCWAFS+ G +EGQ+AI+  KL+  S+ +LV+C K   
Sbjct: 58  PDAFDWRDHDAVTPVKNQGSCGSCWAFSVTGNVEGQWAIQKKKLLSLSEQELVDCDKVDL 117

Query: 72  GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGS 129
           GC+G    +   E     GLE+EKDYPY+   G+  KC ++K++V++  TG   +  N  
Sbjct: 118 GCNGGLPLQAYKEIMRIGGLETEKDYPYE---GKGDKCVFEKAEVEVNITGAVNISSN-E 173

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQ---DN 185
           + MK  L+K GP+S+ LN++ +  Y G         CSP  L H VL+ GYG KQ    +
Sbjct: 174 DDMKAWLWKNGPISIGLNANAMQFYMGGVSHPFSFLCSPSSLDHGVLITGYGIKQGWMSD 233

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            P+W ++NSWG    ++G++ + RG   CG+ Q+   AT+
Sbjct: 234 SPFWAIKNSWGESWGEKGYYLLYRGAGVCGVNQMPTSATV 273



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)

Query: 965  CSPYDLGHAVLLVGYG-KQ---DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 1020
            CSP  L H VL+ GYG KQ    D P+W ++NSWG    ++G++ + RG   CG+ Q+  
Sbjct: 210  CSPSSLDHGVLITGYGIKQGWMSDSPFWAIKNSWGESWGEKGYYLLYRGAGVCGVNQMPT 269

Query: 1021 YATI 1024
             AT+
Sbjct: 270  SATV 273


>gi|194705198|gb|ACF86683.1| unknown [Zea mays]
 gi|413936851|gb|AFW71402.1| cysteine protease1 [Zea mays]
          Length = 371

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 174/346 (50%), Gaps = 61/346 (17%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPE 704
           N    F +F+ + G+ Y + +E   R   FK +  +  +H+       +G ++FSD +P 
Sbjct: 43  NAESHFLSFVQRFGKSYKDADEHAYRLSVFKANLRRARRHQLLDPSAEHGVTKFSDLTPA 102

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAG 758
           E           RTY  +   R  + + L E   + PV      PD +DWR     GP  
Sbjct: 103 EF---------RRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVK 153

Query: 759 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFF 809
           +Q +CGSCW+FS +G LEG + + TGKL   S+ Q V+C  +C         SGC+G   
Sbjct: 154 NQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLM 213

Query: 810 EPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKIL 867
             +  Y  +A GLESEKDYPY  ++G   KC +DKSK+ + + ++F   +  E  +   L
Sbjct: 214 TTAFSYLQKAGGLESEKDYPYTGSDG---KCKFDKSKI-VASVQNFSVVSVDEAQISANL 269

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDN 916
            K+GPL++ +N+  +  Y G           PY     L H VLLVGYG       +  +
Sbjct: 270 IKHGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVLLVGYGASGFAPIRLKD 322

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQIAGYATIDVV 959
            PYW+++NSWG    + G++KI RG+N    CG++ +   +T+  V
Sbjct: 323 KPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMV--STVSAV 366



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 172/346 (49%), Gaps = 60/346 (17%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPE 338
           N    F +F+ + G+ Y + +E   R   FK +  +  +H+       +G ++FSD +P 
Sbjct: 43  NAESHFLSFVQRFGKSYKDADEHAYRLSVFKANLRRARRHQLLDPSAEHGVTKFSDLTPA 102

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAG 392
           E           RTY  +   R  + + L E   + PV      PD +DWR     GP  
Sbjct: 103 EF---------RRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVK 153

Query: 393 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC------GGCDG--L 444
           +Q +CGSCW+FS +G LEG + + TGKL   S+ Q V+C  +C          GC+G  +
Sbjct: 154 NQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLM 213

Query: 445 EQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKIL 502
                Y  +A GLESEKDYPY   +G   KC +DKSK+ + + ++F   +  E  +   L
Sbjct: 214 TTAFSYLQKAGGLESEKDYPYTGSDG---KCKFDKSKI-VASVQNFSVVSVDEAQISANL 269

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDD 551
            K+GPL++G+N+  +  Y G           PY     L H VLLVGYG       +  D
Sbjct: 270 IKHGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVLLVGYGASGFAPIRLKD 322

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNA---CGIEQIAGYATIDVV 594
            PYW+ +NSWG    + G++KI RG+N    CG++ +   +T+  V
Sbjct: 323 KPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMV--STVSAV 366



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 132/243 (54%), Gaps = 38/243 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR     GP  +Q  CGSCW+FS +G LEG + + TGKL   S+ Q V+C  +C
Sbjct: 137 LPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHEC 196

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     +  Y  +A GLESEKDYPY  ++G   KC +DKSK+ + + 
Sbjct: 197 DSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDG---KCKFDKSKI-VASV 252

Query: 121 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 175
           ++F   +  E  +   L K+GPL++ +N+  +  Y G           PY     L H V
Sbjct: 253 QNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGV 305

Query: 176 LLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQIAGYATI 225
           LLVGYG       +  + PYW+++NSWG    + G++KI RG+N    CG++ +   +T+
Sbjct: 306 LLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMV--STV 363

Query: 226 DVV 228
             V
Sbjct: 364 SAV 366



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 11/91 (12%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            I+ G  A GI        I  V     C  + L H VLLVGYG       +  D PYW++
Sbjct: 270  IKHGPLAIGINAAYMQTYIGGVSCPYICGRH-LDHGVLLVGYGASGFAPIRLKDKPYWII 328

Query: 991  RNSWGPIGPDEGFFKIERGNNA---CGIEQI 1018
            +NSWG    + G++KI RG+N    CG++ +
Sbjct: 329  KNSWGENWGENGYYKICRGSNVRNKCGVDSM 359


>gi|162459555|ref|NP_001105685.1| cysteine proteinase 1 precursor [Zea mays]
 gi|1706260|sp|Q10716.1|CYSP1_MAIZE RecName: Full=Cysteine proteinase 1; Flags: Precursor
 gi|643597|dbj|BAA08244.1| cysteine proteinase [Zea mays]
          Length = 371

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 174/346 (50%), Gaps = 61/346 (17%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPE 704
           N    F +F+ + G+ Y + +E   R   FK +  +  +H+       +G ++FSD +P 
Sbjct: 43  NAESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPA 102

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAG 758
           E           RTY  +   R  + + L E   + PV      PD +DWR     GP  
Sbjct: 103 EF---------RRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVK 153

Query: 759 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFF 809
           +Q +CGSCW+FS +G LEG + + TGKL   S+ Q V+C  +C         SGC+G   
Sbjct: 154 NQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLM 213

Query: 810 EPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKIL 867
             +  Y  +A GLESEKDYPY  ++G   KC +DKSK+ + + ++F   +  E  +   L
Sbjct: 214 TTAFSYLQKAGGLESEKDYPYTGSDG---KCKFDKSKI-VASVQNFSVVSVDEAQISANL 269

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDN 916
            K+GPL++ +N+  +  Y G           PY     L H VLLVGYG       +  +
Sbjct: 270 IKHGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVLLVGYGASGFAPIRLKD 322

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQIAGYATIDVV 959
            PYW+++NSWG    + G++KI RG+N    CG++ +   +T+  V
Sbjct: 323 KPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMV--STVSAV 366



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 172/346 (49%), Gaps = 60/346 (17%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPE 338
           N    F +F+ + G+ Y + +E   R   FK +  +  +H+       +G ++FSD +P 
Sbjct: 43  NAESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPA 102

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAG 392
           E           RTY  +   R  + + L E   + PV      PD +DWR     GP  
Sbjct: 103 EF---------RRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVK 153

Query: 393 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC------GGCDG--L 444
           +Q +CGSCW+FS +G LEG + + TGKL   S+ Q V+C  +C          GC+G  +
Sbjct: 154 NQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLM 213

Query: 445 EQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKIL 502
                Y  +A GLESEKDYPY   +G   KC +DKSK+ + + ++F   +  E  +   L
Sbjct: 214 TTAFSYLQKAGGLESEKDYPYTGSDG---KCKFDKSKI-VASVQNFSVVSVDEAQISANL 269

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDD 551
            K+GPL++G+N+  +  Y G           PY     L H VLLVGYG       +  D
Sbjct: 270 IKHGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVLLVGYGASGFAPIRLKD 322

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNA---CGIEQIAGYATIDVV 594
            PYW+ +NSWG    + G++KI RG+N    CG++ +   +T+  V
Sbjct: 323 KPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMV--STVSAV 366



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 132/243 (54%), Gaps = 38/243 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR     GP  +Q  CGSCW+FS +G LEG + + TGKL   S+ Q V+C  +C
Sbjct: 137 LPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHEC 196

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     +  Y  +A GLESEKDYPY  ++G   KC +DKSK+ + + 
Sbjct: 197 DSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDG---KCKFDKSKI-VASV 252

Query: 121 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 175
           ++F   +  E  +   L K+GPL++ +N+  +  Y G           PY     L H V
Sbjct: 253 QNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGV 305

Query: 176 LLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQIAGYATI 225
           LLVGYG       +  + PYW+++NSWG    + G++KI RG+N    CG++ +   +T+
Sbjct: 306 LLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMV--STV 363

Query: 226 DVV 228
             V
Sbjct: 364 SAV 366



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 11/91 (12%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            I+ G  A GI        I  V     C  + L H VLLVGYG       +  D PYW++
Sbjct: 270  IKHGPLAIGINAAYMQTYIGGVSCPYICGRH-LDHGVLLVGYGASGFAPIRLKDKPYWII 328

Query: 991  RNSWGPIGPDEGFFKIERGNNA---CGIEQI 1018
            +NSWG    + G++KI RG+N    CG++ +
Sbjct: 329  KNSWGENWGENGYYKICRGSNVRNKCGVDSM 359


>gi|224285931|gb|ACN40679.1| unknown [Picea sitchensis]
          Length = 366

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 178/350 (50%), Gaps = 44/350 (12%)

Query: 626 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 685
           L  ++TD+VV+    L    +L F+ E     F+ FI + G++Y+  EE + RF  FK +
Sbjct: 29  LIRQVTDEVVSDPQILDARSAL-FNAE---VHFRHFIRRYGKKYSGPEEHEHRFGVFKSN 84

Query: 686 -----GHKK---HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 737
                 H+K      +G ++FSD      L + GF+  +    R    R+  +  ++   
Sbjct: 85  LLRALEHQKLDPRASHGVTKFSD------LTQEGFR-HQYLGLRAPPLRDAHDAPILPTN 137

Query: 738 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 797
               +P+ +DWR+K       +Q +CGSCWAFS  G LEG   +KTG+LV  S+ QLV+C
Sbjct: 138 D---LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLKTGELVSLSEQQLVDC 194

Query: 798 AKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVK 847
             +C         SGC+G     + +Y  ++ GLE E+DYPY   +G    C+++K+K+ 
Sbjct: 195 DHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGKDG---TCSFNKNKIV 251

Query: 848 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 907
                  +       +   L K GPLSV +N+  +  Y G         CS  +L H VL
Sbjct: 252 AHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGG--VSCPYVCSKRNLDHGVL 309

Query: 908 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           LVGYG       +  + PYW+++NSWGP   + G++K+ RG+N CGI  +
Sbjct: 310 LVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINNM 359



 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 175/350 (50%), Gaps = 43/350 (12%)

Query: 260 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 319
           L  ++TD+VV+    L    +L F+ E     F+ FI + G++Y+  EE + RF  FK +
Sbjct: 29  LIRQVTDEVVSDPQILDARSAL-FNAE---VHFRHFIRRYGKKYSGPEEHEHRFGVFKSN 84

Query: 320 -----GHKK---HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 371
                 H+K      +G ++FSD      L + GF+  +    R    R+  +  ++   
Sbjct: 85  LLRALEHQKLDPRASHGVTKFSD------LTQEGFR-HQYLGLRAPPLRDAHDAPILPTN 137

Query: 372 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 431
               +P+ +DWR+K       +Q +CGSCWAFS  G LEG   +KTG+LV  S+ QLV+C
Sbjct: 138 D---LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLKTGELVSLSEQQLVDC 194

Query: 432 AKQC------SGCGGCDGLEQPIEYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVK 482
             +C      S   GC+G      Y +     GLE E+DYPY   +G    C+++K+K+ 
Sbjct: 195 DHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGKDG---TCSFNKNKIV 251

Query: 483 LFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVL 542
                  +       +   L K GPLSVG+N+  +  Y G         CS  +L H VL
Sbjct: 252 AHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGG--VSCPYVCSKRNLDHGVL 309

Query: 543 LVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           LVGYG       +  D PYW+ +NSWGP   + G++K+ RG+N CGI  +
Sbjct: 310 LVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINNM 359



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 122/226 (53%), Gaps = 22/226 (9%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K       +Q  CGSCWAFS  G LEG   +KTG+LV  S+ QLV+C  +C
Sbjct: 139 LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLKTGELVSLSEQQLVDCDHEC 198

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + +Y  ++ GLE E+DYPY   +G    C+++K+K+     
Sbjct: 199 DPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGKDG---TCSFNKNKIVAHVS 255

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
              +       +   L K GPLSV +N+  +  Y G         CS  +L H VLLVGY
Sbjct: 256 NFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGG--VSCPYVCSKRNLDHGVLLVGY 313

Query: 181 G-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           G       +  + PYW+++NSWGP   + G++K+ RG+N CGI  +
Sbjct: 314 GAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINNM 359


>gi|118395092|ref|XP_001029901.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89284178|gb|EAR82238.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 344

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 174/346 (50%), Gaps = 23/346 (6%)

Query: 267 QVVARVDTLAIEGSLTFDNENI----LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK 322
           + +  +  L    S  + NE I    L  F+ F  K  + Y N+ E    F  +K     
Sbjct: 4   KFIVYIFVLVAVASCAYMNETIDPQRLAEFEEFKSKFNKYYHNEHEHHSSFHNYKTSREH 63

Query: 323 --KHE------RYGTSEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKM---LMEV 370
             KH+      ++G ++FSD SPEE   K   F +S     +    + K E M   L + 
Sbjct: 64  IVKHQMENPNAKFGHTKFSDMSPEEFENKMLNFDFSLFKKAKSQGIKLKAEPMKGYLRQG 123

Query: 371 EK--DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 428
           E   +  +P+++DWR K +  PA  Q  CGSCW F+  G++E QYA+K G+L+ FS+  L
Sbjct: 124 ENVDNSDLPESFDWRDKGIITPAKFQNTCGSCWTFATTGVIESQYALKYGELLHFSEQML 183

Query: 429 VECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKD 488
           ++C     GC G   +    ++  Q+G     D  Y +   +K  C +DK+KVK      
Sbjct: 184 LDCDNINQGCRG-GLMTDAYQFLQQSGGIQTAD-TYGDYKNKKDICNFDKAKVKAKVVDW 241

Query: 489 FLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
           +      ET+++ L K GP++VG+N+  + FY G  +  + + C    + HAVL+VGYG 
Sbjct: 242 YQIPENEETIRRELVKNGPVAVGINARTLQFYEGGIV--DPKNCDD-KINHAVLIVGYGV 298

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVV 594
           ++ IPYWL +N WG     +GFFK+ RG   CGI   A  A ++ V
Sbjct: 299 EEGIPYWLIKNQWGAEWGIKGFFKLIRGKKQCGIHTYASIAYVEKV 344



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 173/345 (50%), Gaps = 22/345 (6%)

Query: 633 QVVARVDTLAIEGSLTFDNENI----LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK 688
           + +  +  L    S  + NE I    L  F+ F  K  + Y N+ E    F  +K     
Sbjct: 4   KFIVYIFVLVAVASCAYMNETIDPQRLAEFEEFKSKFNKYYHNEHEHHSSFHNYKTSREH 63

Query: 689 --KHE------RYGTSEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKM---LMEV 736
             KH+      ++G ++FSD SPEE   K   F +S     +    + K E M   L + 
Sbjct: 64  IVKHQMENPNAKFGHTKFSDMSPEEFENKMLNFDFSLFKKAKSQGIKLKAEPMKGYLRQG 123

Query: 737 EK--DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 794
           E   +  +P+++DWR K +  PA  Q  CGSCW F+  G++E QYA+K G+L+ FS+  L
Sbjct: 124 ENVDNSDLPESFDWRDKGIITPAKFQNTCGSCWTFATTGVIESQYALKYGELLHFSEQML 183

Query: 795 VECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 854
           ++C     GC G     + ++  Q+G     D  Y +   +K  C +DK+KVK      +
Sbjct: 184 LDCDNINQGCRGGLMTDAYQFLQQSGGIQTAD-TYGDYKNKKDICNFDKAKVKAKVVDWY 242

Query: 855 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
                 ET+++ L K GP++V +N+  +  Y G  +  + + C    + HAVL+VGYG +
Sbjct: 243 QIPENEETIRRELVKNGPVAVGINARTLQFYEGGIV--DPKNCDD-KINHAVLIVGYGVE 299

Query: 915 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVV 959
           + IPYWL++N WG     +GFFK+ RG   CGI   A  A ++ V
Sbjct: 300 EGIPYWLIKNQWGAEWGIKGFFKLIRGKKQCGIHTYASIAYVEKV 344



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 124/221 (56%), Gaps = 4/221 (1%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  +P+++DWR K +  PA  Q  CGSCW F+  G++E QYA+K G+L+ FS+  L++C 
Sbjct: 128 NSDLPESFDWRDKGIITPAKFQNTCGSCWTFATTGVIESQYALKYGELLHFSEQMLLDCD 187

Query: 68  KQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
               GC G     + ++  Q+G     D  Y +   +K  C +DK+KVK      +    
Sbjct: 188 NINQGCRGGLMTDAYQFLQQSGGIQTAD-TYGDYKNKKDICNFDKAKVKAKVVDWYQIPE 246

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             ET+++ L K GP++V +N+  +  Y G  +  + + C    + HAVL+VGYG ++ IP
Sbjct: 247 NEETIRRELVKNGPVAVGINARTLQFYEGGIV--DPKNCDD-KINHAVLIVGYGVEEGIP 303

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVV 228
           YWL++N WG     +GFFK+ RG   CGI   A  A ++ V
Sbjct: 304 YWLIKNQWGAEWGIKGFFKLIRGKKQCGIHTYASIAYVEKV 344


>gi|289740839|gb|ADD19167.1| cysteine proteinase cathepsin F [Glossina morsitans morsitans]
          Length = 471

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 158/318 (49%), Gaps = 31/318 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 342
           F  F +K  R Y    E + RF  FKQ+           +   +YG +EF+D +  E   
Sbjct: 166 FAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYGITEFADMTSPEYKQ 225

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +TG  W     +     + ++  +         +P  +DWR+K       +Q  CGSCWA
Sbjct: 226 RTGL-WQRDPQKAASNPKAEIPNI--------DLPKEFDWREKGAISAVKNQGNCGSCWA 276

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS+ G +EG +A++TG L ++S+ +L++C    S C G   D   + IE     GLE E 
Sbjct: 277 FSVTGNIEGLHAVRTGVLEQYSEQELLDCDTSDSACNGGLPDNAYEAIEKI--GGLELES 334

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY 520
           DYPY   +  K +C ++ +K+ +              + + L   GP+S+G+N++ + FY
Sbjct: 335 DYPY---HARKDQCHFNSTKIHVKVKGHVDLPKNETAIAQWLIANGPISIGINANAMQFY 391

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKIE 574
            G         CS  +L H VL+VGYG  D       +PYW+ +NSWG    ++G++++ 
Sbjct: 392 RGGVSHPPHILCSRKNLDHGVLIVGYGVSDYPMFKKTLPYWIVKNSWGKKWGEQGYYRVY 451

Query: 575 RGNNACGIEQIAGYATID 592
           RG+N CG+ +++  A +D
Sbjct: 452 RGDNTCGVSEMSSSAVLD 469



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 163/317 (51%), Gaps = 30/317 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 708
           F  F +K  R Y    E + RF  FKQ+           +   +YG +EF+D +  E   
Sbjct: 166 FAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYGITEFADMTSPEYKQ 225

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +TG  W     +     + ++  +         +P  +DWR+K       +Q  CGSCWA
Sbjct: 226 RTGL-WQRDPQKAASNPKAEIPNI--------DLPKEFDWREKGAISAVKNQGNCGSCWA 276

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           FS+ G +EG +A++TG L ++S+ +L++C    S C+G   + + E   +  GLE E DY
Sbjct: 277 FSVTGNIEGLHAVRTGVLEQYSEQELLDCDTSDSACNGGLPDNAYEAIEKIGGLELESDY 336

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYN 886
           PY   +  K +C ++ +K+ +   K  +    +ET + + L   GP+S+ +N++ +  Y 
Sbjct: 337 PY---HARKDQCHFNSTKIHVKV-KGHVDLPKNETAIAQWLIANGPISIGINANAMQFYR 392

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIER 940
           G         CS  +L H VL+VGYG  D       +PYW+V+NSWG    ++G++++ R
Sbjct: 393 GGVSHPPHILCSRKNLDHGVLIVGYGVSDYPMFKKTLPYWIVKNSWGKKWGEQGYYRVYR 452

Query: 941 GNNACGIEQIAGYATID 957
           G+N CG+ +++  A +D
Sbjct: 453 GDNTCGVSEMSSSAVLD 469



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 130/224 (58%), Gaps = 12/224 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K       +Q +CGSCWAFS+ G +EG +A++TG L ++S+ +L++C    
Sbjct: 250 LPKEFDWREKGAISAVKNQGNCGSCWAFSVTGNIEGLHAVRTGVLEQYSEQELLDCDTSD 309

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           S C+G   + + E   +  GLE E DYPY   +  K +C ++ +K+ +   K  +    +
Sbjct: 310 SACNGGLPDNAYEAIEKIGGLELESDYPY---HARKDQCHFNSTKIHVKV-KGHVDLPKN 365

Query: 130 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD---- 184
           ET + + L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  D    
Sbjct: 366 ETAIAQWLIANGPISIGINANAMQFYRGGVSHPPHILCSRKNLDHGVLIVGYGVSDYPMF 425

Query: 185 --NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
              +PYW+V+NSWG    ++G++++ RG+N CG+ +++  A +D
Sbjct: 426 KKTLPYWIVKNSWGKKWGEQGYYRVYRGDNTCGVSEMSSSAVLD 469


>gi|410913409|ref|XP_003970181.1| PREDICTED: cathepsin F-like [Takifugu rubripes]
          Length = 476

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 155/315 (49%), Gaps = 22/315 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +L  FK F+ K  + Y++ EE   R + FK++     +          YG ++FSD + E
Sbjct: 174 LLGLFKEFMTKYNKVYSSQEEADRRLQIFKENLKTAEKIQSLDEGSAEYGVTKFSDLTEE 233

Query: 339 EILCKTGFKWSERTYERIVADREKVEK-MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E            TY   +  +  + + M        P P +WDWR      P  +Q  C
Sbjct: 234 EF---------RLTYLNPLLSQWTLRRPMKPASPARSPAPASWDWRDHGAVSPVKNQGLC 284

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLE 457
           GSCWAFS+ G +EGQ+ +K GKL+  S+ +LV+C      C G              GLE
Sbjct: 285 GSCWAFSVTGNIEGQWFLKHGKLLSLSEQELVDCDGLDHACRGGLPSNAYEAIEGLGGLE 344

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
           +E DY Y   +G K KC++   KV  +        +    M   L + GP+SV LN+  +
Sbjct: 345 AENDYTY---SGHKQKCSFATEKVAAYINSSVELPSDENEMAAWLAENGPVSVALNAFAM 401

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY           C+P+ + HAVLLVGYG+++ IP+W  +NSWG    +EG++ + +G+
Sbjct: 402 QFYKKGVSHPWMILCNPWMIDHAVLLVGYGERNGIPFWAIKNSWGEDYGEEGYYYLYKGS 461

Query: 578 NACGIEQIAGYATID 592
           NACGI ++   A I+
Sbjct: 462 NACGINKMGSSAVIN 476



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 158/317 (49%), Gaps = 27/317 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +L  FK F+ K  + Y++ EE   R + FK++     +          YG ++FSD + E
Sbjct: 174 LLGLFKEFMTKYNKVYSSQEEADRRLQIFKENLKTAEKIQSLDEGSAEYGVTKFSDLTEE 233

Query: 705 EILCKTGFKWSERTYERIVADREKVEK-MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E            TY   +  +  + + M        P P +WDWR      P  +Q  C
Sbjct: 234 EF---------RLTYLNPLLSQWTLRRPMKPASPARSPAPASWDWRDHGAVSPVKNQGLC 284

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QAG 820
           GSCWAFS+ G +EGQ+ +K GKL+  S+ +LV+C      C G    PS  Y       G
Sbjct: 285 GSCWAFSVTGNIEGQWFLKHGKLLSLSEQELVDCDGLDHACRGGL--PSNAYEAIEGLGG 342

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           LE+E DY Y   +G K KC++   KV  +        +    M   L + GP+SV LN+ 
Sbjct: 343 LEAENDYTY---SGHKQKCSFATEKVAAYINSSVELPSDENEMAAWLAENGPVSVALNAF 399

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +  Y           C+P+ + HAVLLVGYG+++ IP+W ++NSWG    +EG++ + +
Sbjct: 400 AMQFYKKGVSHPWMILCNPWMIDHAVLLVGYGERNGIPFWAIKNSWGEDYGEEGYYYLYK 459

Query: 941 GNNACGIEQIAGYATID 957
           G+NACGI ++   A I+
Sbjct: 460 GSNACGINKMGSSAVIN 476



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 121/220 (55%), Gaps = 8/220 (3%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P P +WDWR      P  +Q  CGSCWAFS+ G +EGQ+ +K GKL+  S+ +LV+C   
Sbjct: 262 PAPASWDWRDHGAVSPVKNQGLCGSCWAFSVTGNIEGQWFLKHGKLLSLSEQELVDCDGL 321

Query: 70  CSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
              C G    PS  Y       GLE+E DY Y   +G K KC++   KV  +        
Sbjct: 322 DHACRGGL--PSNAYEAIEGLGGLEAENDYTY---SGHKQKCSFATEKVAAYINSSVELP 376

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           +    M   L + GP+SV LN+  +  Y           C+P+ + HAVLLVGYG+++ I
Sbjct: 377 SDENEMAAWLAENGPVSVALNAFAMQFYKKGVSHPWMILCNPWMIDHAVLLVGYGERNGI 436

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           P+W ++NSWG    +EG++ + +G+NACGI ++   A I+
Sbjct: 437 PFWAIKNSWGEDYGEEGYYYLYKGSNACGINKMGSSAVIN 476



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 46/61 (75%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVLLVGYG+++ IP+W ++NSWG    +EG++ + +G+NACGI ++   A I
Sbjct: 416  CNPWMIDHAVLLVGYGERNGIPFWAIKNSWGEDYGEEGYYYLYKGSNACGINKMGSSAVI 475

Query: 1025 D 1025
            +
Sbjct: 476  N 476


>gi|74273320|gb|ABA01328.1| secreted cathepsin F [Teladorsagia circumcincta]
          Length = 364

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 151/309 (48%), Gaps = 18/309 (5%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 342
           F +FI +  + Y N+ E  +RF  FK         Q+  K    YG ++F+D SPEE   
Sbjct: 64  FTSFIERHDKVYRNESEALKRFGIFKRNLEIIRSAQENDKGTAIYGINQFADLSPEE-FK 122

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           KT       T+++       V+     V+   P+P+++DWR+         +  C +CWA
Sbjct: 123 KTHLP---HTWKQPDHPNRIVDLAAEGVDPKEPLPESFDWREHGAVTKVKTEGHCAACWA 179

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           FS+ G +EGQ+ +   KLV  S  QL++C     GC G   L+   E     GLE E  Y
Sbjct: 180 FSVTGNIEGQWFLAKKKLVSLSAQQLLDCDVVDEGCNGGFPLDAYKEIVRMGGLEPEDKY 239

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
           PY     +  +C    S + ++        +  E M+  L K GP+S+G+    I FY G
Sbjct: 240 PY---EAKAEQCRLVPSDIAVYINGSVELPHDEEKMRAWLVKKGPISIGITVDDIQFYKG 296

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
              R    TC    + H  LLVGYG + +IPYW+ +NSWGP   ++G++++ RG NAC I
Sbjct: 297 GVSRPT--TCRLSSMIHGALLVGYGVEKNIPYWIIKNSWGPNWGEDGYYRMVRGENACRI 354

Query: 583 EQIAGYATI 591
            +    A +
Sbjct: 355 NRFPTSAVV 363



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 154/309 (49%), Gaps = 19/309 (6%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 708
           F +FI +  + Y N+ E  +RF  FK         Q+  K    YG ++F+D SPEE   
Sbjct: 64  FTSFIERHDKVYRNESEALKRFGIFKRNLEIIRSAQENDKGTAIYGINQFADLSPEE-FK 122

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           KT       T+++       V+     V+   P+P+++DWR+         +  C +CWA
Sbjct: 123 KTHLP---HTWKQPDHPNRIVDLAAEGVDPKEPLPESFDWREHGAVTKVKTEGHCAACWA 179

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDY 827
           FS+ G +EGQ+ +   KLV  S  QL++C     GC+G F  +   E     GLE E  Y
Sbjct: 180 FSVTGNIEGQWFLAKKKLVSLSAQQLLDCDVVDEGCNGGFPLDAYKEIVRMGGLEPEDKY 239

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG 887
           PY+ A  E+  C    S + ++        +  E M+  L K GP+S+ +  D I  Y G
Sbjct: 240 PYE-AKAEQ--CRLVPSDIAVYINGSVELPHDEEKMRAWLVKKGPISIGITVDDIQFYKG 296

Query: 888 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
              R    TC    + H  LLVGYG + NIPYW+++NSWGP   ++G++++ RG NAC I
Sbjct: 297 GVSRPT--TCRLSSMIHGALLVGYGVEKNIPYWIIKNSWGPNWGEDGYYRMVRGENACRI 354

Query: 948 EQIAGYATI 956
            +    A +
Sbjct: 355 NRFPTSAVV 363



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 117/222 (52%), Gaps = 6/222 (2%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           V+   P+P+++DWR+         +  C +CWAFS+ G +EGQ+ +   KLV  S  QL+
Sbjct: 147 VDPKEPLPESFDWREHGAVTKVKTEGHCAACWAFSVTGNIEGQWFLAKKKLVSLSAQQLL 206

Query: 65  ECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C     GC+G F  +   E     GLE E  YPY+ A  E+  C    S + ++     
Sbjct: 207 DCDVVDEGCNGGFPLDAYKEIVRMGGLEPEDKYPYE-AKAEQ--CRLVPSDIAVYINGSV 263

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
              +  E M+  L K GP+S+ +  D I  Y G   R    TC    + H  LLVGYG +
Sbjct: 264 ELPHDEEKMRAWLVKKGPISIGITVDDIQFYKGGVSRPT--TCRLSSMIHGALLVGYGVE 321

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            NIPYW+++NSWGP   ++G++++ RG NAC I +    A +
Sbjct: 322 KNIPYWIIKNSWGPNWGEDGYYRMVRGENACRINRFPTSAVV 363



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 41/66 (62%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            V    TC    + H  LLVGYG + +IPYW+++NSWGP   ++G++++ RG NAC I + 
Sbjct: 298  VSRPTTCRLSSMIHGALLVGYGVEKNIPYWIIKNSWGPNWGEDGYYRMVRGENACRINRF 357

Query: 1019 AGYATI 1024
               A +
Sbjct: 358  PTSAVV 363


>gi|118429523|gb|ABK91809.1| cathepsin L-like proteinase precursor [Clonorchis sinensis]
          Length = 373

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 173/343 (50%), Gaps = 31/343 (9%)

Query: 269 VARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKH 324
           +  +D++ ++  +  D N  +   +K F+    R Y +  E + RF+ F  +     K +
Sbjct: 42  LTSLDSMHMQDVIGVDWNFTLSSIWKHFMTTYKRNYIDPSEHERRFKIFANNFVRISKHN 101

Query: 325 ERY---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
            R+         G +EFSD++ EE+     F+ S      + A R+  + + +      P
Sbjct: 102 VRFIQGQVSYTMGINEFSDKTDEELKRLRCFRGS------LNASRDGSKYITIA----AP 151

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            P   DWR K    P  +Q  CGSCWAFS  G +EGQ  + TG LV  S+ QLV+C+ + 
Sbjct: 152 PPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGAIEGQNFLATGNLVSLSEQQLVDCSSEY 211

Query: 436 SGCGGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNG--EKFKCAYD-KSKVKLFTGKDF 489
            G   C+G  ++   +Y   + G+++E  YPY +G        C ++ K  V   TG   
Sbjct: 212 -GNNACNGGLMDNAFKYVKDSNGIDTEASYPYVSGETGDANPTCRFNLKEAVVRVTGYID 270

Query: 490 LYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           L       +K+ +  YGP+SV +N+ L  F +      +D+ CS  DL H VLLVGYG++
Sbjct: 271 LPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQCSSDDLDHGVLLVGYGEE 330

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           + IPYWL +NSWGP   + G+ KI R  NN CG+  +A Y  I
Sbjct: 331 NGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVASMASYPLI 373



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 174/344 (50%), Gaps = 34/344 (9%)

Query: 635 VARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKH 690
           +  +D++ ++  +  D N  +   +K F+    R Y +  E + RF+ F  +     K +
Sbjct: 42  LTSLDSMHMQDVIGVDWNFTLSSIWKHFMTTYKRNYIDPSEHERRFKIFANNFVRISKHN 101

Query: 691 ERY---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
            R+         G +EFSD++ EE+     F+ S      + A R+  + + +      P
Sbjct: 102 VRFIQGQVSYTMGINEFSDKTDEELKRLRCFRGS------LNASRDGSKYITIA----AP 151

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
            P   DWR K    P  +Q  CGSCWAFS  G +EGQ  + TG LV  S+ QLV+C+ + 
Sbjct: 152 PPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGAIEGQNFLATGNLVSLSEQQLVDCSSEY 211

Query: 801 -CSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE----KFKCAYD-KSKVKLFTGKD 853
             + C+G   + + +Y   + G+++E  YPY   +GE       C ++ K  V   TG  
Sbjct: 212 GNNACNGGLMDNAFKYVKDSNGIDTEASYPY--VSGETGDANPTCRFNLKEAVVRVTGYI 269

Query: 854 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 913
            L       +K+ +  YGP+SV +N+ L    +      +D+ CS  DL H VLLVGYG+
Sbjct: 270 DLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQCSSDDLDHGVLLVGYGE 329

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           ++ IPYWL++NSWGP   + G+ KI R  NN CG+  +A Y  I
Sbjct: 330 ENGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVASMASYPLI 373



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 11/226 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
            P P   DWR K    P  +Q +CGSCWAFS  G +EGQ  + TG LV  S+ QLV+C+ 
Sbjct: 150 APPPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGAIEGQNFLATGNLVSLSEQQLVDCSS 209

Query: 69  Q--CSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE----KFKCAYD-KSKVKLFTG 120
           +   + C+G   + + +Y   + G+++E  YPY   +GE       C ++ K  V   TG
Sbjct: 210 EYGNNACNGGLMDNAFKYVKDSNGIDTEASYPY--VSGETGDANPTCRFNLKEAVVRVTG 267

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
              L       +K+ +  YGP+SV +N+ L    +      +D+ CS  DL H VLLVGY
Sbjct: 268 YIDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQCSSDDLDHGVLLVGY 327

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           G+++ IPYWL++NSWGP   + G+ KI R  NN CG+  +A Y  I
Sbjct: 328 GEENGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVASMASYPLI 373



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V +D+ CS  DL H VLLVGYG+++ IPYWL++NSWGP   + G+ KI R  NN CG+  
Sbjct: 307  VYSDDQCSSDDLDHGVLLVGYGEENGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVAS 366

Query: 1018 IAGYATI 1024
            +A Y  I
Sbjct: 367  MASYPLI 373


>gi|116787909|gb|ABK24688.1| unknown [Picea sitchensis]
 gi|224284108|gb|ACN39791.1| unknown [Picea sitchensis]
 gi|224285024|gb|ACN40241.1| unknown [Picea sitchensis]
          Length = 366

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 176/350 (50%), Gaps = 44/350 (12%)

Query: 626 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 685
           L  ++TD+VV+    L    +L F+ E     F+ FI + G++Y+  EE + RF  FK +
Sbjct: 29  LIRQVTDEVVSDPQILDARSAL-FNAE---VHFRHFIRRYGKKYSGPEEHEHRFGVFKSN 84

Query: 686 -----GHKK---HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 737
                 H+K      +G ++FSD + EE          +    R    R+  +  ++   
Sbjct: 85  LLRALEHQKLDPRASHGVTKFSDLTQEEFR-------HQYLGLRAPPLRDAHDAPILPTN 137

Query: 738 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 797
               +P+ +DWR+K       +Q +CGSCWAFS  G LEG   +KTG+LV  S+ QLV+C
Sbjct: 138 D---LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLKTGELVSLSEQQLVDC 194

Query: 798 AKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVK 847
             +C         SGC+G     + +Y  ++ GLE E+DYPY   +G    C+++K+K+ 
Sbjct: 195 DHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGKDG---TCSFNKNKIV 251

Query: 848 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 907
                  +       +   L K GPLSV +N+  +  Y G         CS  +L H VL
Sbjct: 252 AHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGG--VSCPYVCSKRNLDHGVL 309

Query: 908 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           LVGYG       +  + PYW+++NSWGP   + G++K+ RG+N CGI  +
Sbjct: 310 LVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINNM 359



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 173/350 (49%), Gaps = 43/350 (12%)

Query: 260 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 319
           L  ++TD+VV+    L    +L F+ E     F+ FI + G++Y+  EE + RF  FK +
Sbjct: 29  LIRQVTDEVVSDPQILDARSAL-FNAE---VHFRHFIRRYGKKYSGPEEHEHRFGVFKSN 84

Query: 320 -----GHKK---HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 371
                 H+K      +G ++FSD + EE          +    R    R+  +  ++   
Sbjct: 85  LLRALEHQKLDPRASHGVTKFSDLTQEEFR-------HQYLGLRAPPLRDAHDAPILPTN 137

Query: 372 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 431
               +P+ +DWR+K       +Q +CGSCWAFS  G LEG   +KTG+LV  S+ QLV+C
Sbjct: 138 D---LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLKTGELVSLSEQQLVDC 194

Query: 432 AKQC------SGCGGCDGLEQPIEYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVK 482
             +C      S   GC+G      Y +     GLE E+DYPY   +G    C+++K+K+ 
Sbjct: 195 DHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGKDG---TCSFNKNKIV 251

Query: 483 LFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVL 542
                  +       +   L K GPLSVG+N+  +  Y G         CS  +L H VL
Sbjct: 252 AHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGG--VSCPYVCSKRNLDHGVL 309

Query: 543 LVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           LVGYG       +  D PYW+ +NSWGP   + G++K+ RG+N CGI  +
Sbjct: 310 LVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINNM 359



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 122/226 (53%), Gaps = 22/226 (9%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K       +Q  CGSCWAFS  G LEG   +KTG+LV  S+ QLV+C  +C
Sbjct: 139 LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLKTGELVSLSEQQLVDCDHEC 198

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + +Y  ++ GLE E+DYPY   +G    C+++K+K+     
Sbjct: 199 DPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGKDG---TCSFNKNKIVAHVS 255

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
              +       +   L K GPLSV +N+  +  Y G         CS  +L H VLLVGY
Sbjct: 256 NFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGG--VSCPYVCSKRNLDHGVLLVGY 313

Query: 181 G-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           G       +  + PYW+++NSWGP   + G++K+ RG+N CGI  +
Sbjct: 314 GAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINNM 359


>gi|397517049|ref|XP_003828732.1| PREDICTED: cathepsin F [Pan paniscus]
          Length = 379

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 148/314 (47%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 78  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 137

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 138 EF---------RTIYLNPLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 188

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+
Sbjct: 189 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLET 248

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY Y+   G    C +   K K++     +     + +   L K GP+SV +N+  + 
Sbjct: 249 EDDYSYQ---GHMQSCNFSAEKAKVYINDSVVLSQNEQKLAAWLAKRGPISVAINAFGMQ 305

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY     R     CSP+ + HAVLLVGYG + D+P+W  +NSWG    ++G++ + RG+ 
Sbjct: 306 FYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSG 365

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A +D
Sbjct: 366 ACGVNTMASSAVVD 379



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 152/316 (48%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 78  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 137

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 138 EF---------RTIYLNPLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 188

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  GL
Sbjct: 189 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGL 246

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y+   G    C +   K K++     +     + +   L K GP+SV +N+  
Sbjct: 247 ETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVVLSQNEQKLAAWLAKRGPISVAINAFG 303

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y     R     CSP+ + HAVLLVGYG + ++P+W ++NSWG    ++G++ + RG
Sbjct: 304 MQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRG 363

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A +D
Sbjct: 364 SGACGVNTMASSAVVD 379



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 118/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 166 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 225

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++     +   
Sbjct: 226 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVVLSQ 280

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 281 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 340

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 341 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 379



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 319  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 378

Query: 1025 D 1025
            D
Sbjct: 379  D 379


>gi|116779325|gb|ABK21238.1| unknown [Picea sitchensis]
 gi|148905850|gb|ABR16087.1| unknown [Picea sitchensis]
 gi|148908434|gb|ABR17330.1| unknown [Picea sitchensis]
 gi|148908881|gb|ABR17545.1| unknown [Picea sitchensis]
 gi|224286109|gb|ACN40765.1| unknown [Picea sitchensis]
          Length = 366

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 176/350 (50%), Gaps = 44/350 (12%)

Query: 626 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 685
           L  ++TD+VV+    L    +L F+ E     F+ FI + G++Y+  EE + RF  FK +
Sbjct: 29  LIRQVTDEVVSDPQILDARSAL-FNAE---VHFRHFIRRYGKKYSGPEEHEHRFGVFKSN 84

Query: 686 -----GHKK---HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 737
                 H+K      +G ++FSD + EE          +    R    R+  +  ++   
Sbjct: 85  LLRALEHQKLDPRASHGVTKFSDLTQEEFR-------HQYLGLRAPPLRDAHDAPILPTN 137

Query: 738 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 797
               +P+ +DWR+K       +Q +CGSCWAFS  G LEG   +KTG+LV  S+ QLV+C
Sbjct: 138 D---LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLKTGELVSLSEQQLVDC 194

Query: 798 AKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVK 847
             +C         SGC+G     + +Y  ++ GLE E+DYPY   +G    C+++K+K+ 
Sbjct: 195 DHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGKDG---TCSFNKNKIV 251

Query: 848 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 907
                  +       +   L K GPLSV +N+  +  Y G         CS  +L H VL
Sbjct: 252 AHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGG--VSCPYVCSKRNLDHGVL 309

Query: 908 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           LVGYG       +  + PYW+++NSWGP   + G++K+ RG+N CGI  +
Sbjct: 310 LVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINNM 359



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 173/350 (49%), Gaps = 43/350 (12%)

Query: 260 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 319
           L  ++TD+VV+    L    +L F+ E     F+ FI + G++Y+  EE + RF  FK +
Sbjct: 29  LIRQVTDEVVSDPQILDARSAL-FNAE---VHFRHFIRRYGKKYSGPEEHEHRFGVFKSN 84

Query: 320 -----GHKK---HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 371
                 H+K      +G ++FSD + EE          +    R    R+  +  ++   
Sbjct: 85  LLRALEHQKLDPRASHGVTKFSDLTQEEFR-------HQYLGLRAPPLRDAHDAPILPTN 137

Query: 372 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 431
               +P+ +DWR+K       +Q +CGSCWAFS  G LEG   +KTG+LV  S+ QLV+C
Sbjct: 138 D---LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLKTGELVSLSEQQLVDC 194

Query: 432 AKQC------SGCGGCDGLEQPIEYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVK 482
             +C      S   GC+G      Y +     GLE E+DYPY   +G    C+++K+K+ 
Sbjct: 195 DHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGKDG---TCSFNKNKIV 251

Query: 483 LFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVL 542
                  +       +   L K GPLSVG+N+  +  Y G         CS  +L H VL
Sbjct: 252 AHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGG--VSCPYVCSKRNLDHGVL 309

Query: 543 LVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           LVGYG       +  D PYW+ +NSWGP   + G++K+ RG+N CGI  +
Sbjct: 310 LVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINNM 359



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 122/226 (53%), Gaps = 22/226 (9%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K       +Q  CGSCWAFS  G LEG   +KTG+LV  S+ QLV+C  +C
Sbjct: 139 LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLKTGELVSLSEQQLVDCDHEC 198

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + +Y  ++ GLE E+DYPY   +G    C+++K+K+     
Sbjct: 199 DPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGKDG---TCSFNKNKIVAHVS 255

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
              +       +   L K GPLSV +N+  +  Y G         CS  +L H VLLVGY
Sbjct: 256 NFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGG--VSCPYVCSKRNLDHGVLLVGY 313

Query: 181 G-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           G       +  + PYW+++NSWGP   + G++K+ RG+N CGI  +
Sbjct: 314 GAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINNM 359


>gi|54696066|gb|AAV38405.1| cathepsin F [synthetic construct]
          Length = 485

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 158/338 (46%), Gaps = 22/338 (6%)

Query: 266 DQVVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 324
           ++  + V +L  E  L+ D    +   FK F++   R Y + EE + R   F  +  +  
Sbjct: 160 NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ 219

Query: 325 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
           +         +YG ++FSD + EE             Y   +  +E   KM         
Sbjct: 220 KIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNTLLRKEPGNKMKQAKSVGDL 270

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 330

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
             C G           +  GLE+E DY Y+   G    C +   K K++           
Sbjct: 331 KACMGGLPSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSMELSQNE 387

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           + +   L K GP+SV +N+  + FY     R     CSP+ + HAVLLVGYG + D+P+W
Sbjct: 388 QKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFW 447

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 593
             +NSWG    ++G++ + RG+ ACG+  +A  A +D+
Sbjct: 448 AIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVDL 485



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 162/340 (47%), Gaps = 27/340 (7%)

Query: 632 DQVVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 690
           ++  + V +L  E  L+ D    +   FK F++   R Y + EE + R   F  +  +  
Sbjct: 160 NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ 219

Query: 691 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
           +         +YG ++FSD + EE             Y   +  +E   KM         
Sbjct: 220 KIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNTLLRKEPGNKMKQAKSVGDL 270

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 330

Query: 802 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 331 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSMELSQ 385

Query: 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 386 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 445

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D+
Sbjct: 446 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVDL 485



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 118/220 (53%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 330

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 331 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSMELSQ 385

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 386 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 445

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D+
Sbjct: 446 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVDL 485



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 45/62 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 424  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 483

Query: 1025 DV 1026
            D+
Sbjct: 484  DL 485


>gi|332026794|gb|EGI66903.1| Putative cysteine proteinase [Acromyrmex echinatior]
          Length = 774

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 162/318 (50%), Gaps = 32/318 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER---------YGTSEFSDRSPEEILC 342
           F  F+    R Y++ E    RF+ F+++ +   E          YG + F+D S +E   
Sbjct: 470 FNNFMTTYNRTYSSLER-NLRFKIFRENLNFIEELRETEQGTGIYGVNMFADMSQKEFRT 528

Query: 343 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
           +  G +   ++   I   + ++         D  +P ++DWR+K V  P  +Q  CGSCW
Sbjct: 529 RYLGLRPDLQSENEIPLPKAEI--------PDIDLPSSFDWRQKGVVTPVKNQGQCGSCW 580

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESE 459
           AFS+ G +EGQYAIK G+L+  S+ +LV+C     GC G   D   + IE     GLE E
Sbjct: 581 AFSVTGNVEGQYAIKHGQLLSLSEQELVDCDHLDEGCNGGLPDNAYRAIE--QLGGLELE 638

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
            DYPY     E  KC + ++ VK+         +    + + L + GP+++G+N++ + F
Sbjct: 639 SDYPYE---AENEKCHFKQNLVKVELASAVNITSNETQIAQWLVQNGPIAIGINANAMQF 695

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGK------QDDIPYWLARNSWGPIGPDEGFFKI 573
           Y G         C+P +L H VL+VGYG         ++PYW+ +NSWG    ++G++++
Sbjct: 696 YMGGVSHPLKILCNPNNLNHGVLIVGYGTSRYPLFHKNLPYWIIKNSWGKSWGEQGYYRV 755

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+  CG+  +A  A +
Sbjct: 756 YRGDGTCGLNTMASSAVV 773



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 162/316 (51%), Gaps = 29/316 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER---------YGTSEFSDRSPEEILC 708
           F  F+    R Y++ E    RF+ F+++ +   E          YG + F+D S +E   
Sbjct: 470 FNNFMTTYNRTYSSLER-NLRFKIFRENLNFIEELRETEQGTGIYGVNMFADMSQKEFRT 528

Query: 709 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
           +  G +   ++   I   + ++         D  +P ++DWR+K V  P  +Q  CGSCW
Sbjct: 529 RYLGLRPDLQSENEIPLPKAEI--------PDIDLPSSFDWRQKGVVTPVKNQGQCGSCW 580

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKD 826
           AFS+ G +EGQYAIK G+L+  S+ +LV+C     GC+G   + +     Q  GLE E D
Sbjct: 581 AFSVTGNVEGQYAIKHGQLLSLSEQELVDCDHLDEGCNGGLPDNAYRAIEQLGGLELESD 640

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 886
           YPY+    E  KC + ++ VK+         +    + + L + GP+++ +N++ +  Y 
Sbjct: 641 YPYE---AENEKCHFKQNLVKVELASAVNITSNETQIAQWLVQNGPIAIGINANAMQFYM 697

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGK------QDNIPYWLVRNSWGPIGPDEGFFKIER 940
           G         C+P +L H VL+VGYG         N+PYW+++NSWG    ++G++++ R
Sbjct: 698 GGVSHPLKILCNPNNLNHGVLIVGYGTSRYPLFHKNLPYWIIKNSWGKSWGEQGYYRVYR 757

Query: 941 GNNACGIEQIAGYATI 956
           G+  CG+  +A  A +
Sbjct: 758 GDGTCGLNTMASSAVV 773



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 127/225 (56%), Gaps = 10/225 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P ++DWR+K V  P  +Q  CGSCWAFS+ G +EGQYAIK G+L+  S+ +LV+C 
Sbjct: 552 DIDLPSSFDWRQKGVVTPVKNQGQCGSCWAFSVTGNVEGQYAIKHGQLLSLSEQELVDCD 611

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
               GC+G   + +     Q  GLE E DYPY+    E  KC + ++ VK+         
Sbjct: 612 HLDEGCNGGLPDNAYRAIEQLGGLELESDYPYE---AENEKCHFKQNLVKVELASAVNIT 668

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK---- 182
           +    + + L + GP+++ +N++ +  Y G         C+P +L H VL+VGYG     
Sbjct: 669 SNETQIAQWLVQNGPIAIGINANAMQFYMGGVSHPLKILCNPNNLNHGVLIVGYGTSRYP 728

Query: 183 --QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
               N+PYW+++NSWG    ++G++++ RG+  CG+  +A  A +
Sbjct: 729 LFHKNLPYWIIKNSWGKSWGEQGYYRVYRGDGTCGLNTMASSAVV 773


>gi|354496134|ref|XP_003510182.1| PREDICTED: cathepsin F [Cricetulus griseus]
 gi|344250261|gb|EGW06365.1| Cathepsin F [Cricetulus griseus]
          Length = 462

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 152/316 (48%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F++   R Y + EE + R   F ++  K  +         +YG ++FSD + E
Sbjct: 161 MTTVFKDFMITYNRTYESREETQWRLTVFTRNMVKAQKIEALDRGTAQYGITKFSDLTEE 220

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +  ++   KM +    + P P  WDWRKK       DQ  CG
Sbjct: 221 EFYT---------IYLNPLLQKKPGSKMSLAKSINDPAPPEWDWRKKGAVTKVKDQGMCG 271

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  YT      GL
Sbjct: 272 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACLGGM--PSNAYTAIKSLGGL 329

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY YK   G    C +   K K++             M   L + GP+SV +N+  
Sbjct: 330 ETEDDYSYK---GYVQACNFSAQKAKVYINDSVELSKNESKMAAWLAQKGPISVAINAFG 386

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y           CSP+ + HAVLLVGYG + N PYW ++NSWG    +EG++ + RG
Sbjct: 387 MQFYRHGIAHPLRPLCSPWLIDHAVLLVGYGNRSNTPYWAIKNSWGSNWGEEGYYYLYRG 446

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A ++
Sbjct: 447 SGACGVNTMASSAVVN 462



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 148/314 (47%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F++   R Y + EE + R   F ++  K  +         +YG ++FSD + E
Sbjct: 161 MTTVFKDFMITYNRTYESREETQWRLTVFTRNMVKAQKIEALDRGTAQYGITKFSDLTEE 220

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +  ++   KM +    + P P  WDWRKK       DQ  CG
Sbjct: 221 EFYT---------IYLNPLLQKKPGSKMSLAKSINDPAPPEWDWRKKGAVTKVKDQGMCG 271

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G              GLE+
Sbjct: 272 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACLGGMPSNAYTAIKSLGGLET 331

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY Y+   G    C +   K K++             M   L + GP+SV +N+  + 
Sbjct: 332 EDDYSYK---GYVQACNFSAQKAKVYINDSVELSKNESKMAAWLAQKGPISVAINAFGMQ 388

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY           CSP+ + HAVLLVGYG + + PYW  +NSWG    +EG++ + RG+ 
Sbjct: 389 FYRHGIAHPLRPLCSPWLIDHAVLLVGYGNRSNTPYWAIKNSWGSNWGEEGYYYLYRGSG 448

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A ++
Sbjct: 449 ACGVNTMASSAVVN 462



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 118/229 (51%), Gaps = 8/229 (3%)

Query: 1   MLMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
           M +    + P P  WDWRKK       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+
Sbjct: 239 MSLAKSINDPAPPEWDWRKKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSE 298

Query: 61  SQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL 117
            +L++C K    C G    PS  YT      GLE+E DY YK   G    C +   K K+
Sbjct: 299 QELLDCDKMDKACLGGM--PSNAYTAIKSLGGLETEDDYSYK---GYVQACNFSAQKAKV 353

Query: 118 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
           +             M   L + GP+SV +N+  +  Y           CSP+ + HAVLL
Sbjct: 354 YINDSVELSKNESKMAAWLAQKGPISVAINAFGMQFYRHGIAHPLRPLCSPWLIDHAVLL 413

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           VGYG + N PYW ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 414 VGYGNRSNTPYWAIKNSWGSNWGEEGYYYLYRGSGACGVNTMASSAVVN 462



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + + PYW ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 402  CSPWLIDHAVLLVGYGNRSNTPYWAIKNSWGSNWGEEGYYYLYRGSGACGVNTMASSAVV 461

Query: 1025 D 1025
            +
Sbjct: 462  N 462


>gi|403293601|ref|XP_003937801.1| PREDICTED: cathepsin F [Saimiri boliviensis boliviensis]
          Length = 379

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 153/315 (48%), Gaps = 23/315 (7%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   F+ F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 78  MASIFRNFVITYNRTYESKEEAQWRLSIFAHNMVRAQKIQALDRGTAQYGVTKFSDLTEE 137

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV-PDAWDWRKKNVTGPAGDQAAC 397
           E           RT       RE+  K + + +  G + P  WDWR K       DQ  C
Sbjct: 138 EF----------RTIYLNPLLREEPGKKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMC 187

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLE 457
           GSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE
Sbjct: 188 GSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKIDKACMGGLPSSAYSAIKNLGGLE 247

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
           +E DY YR   G    C++   K K++           + +   L K GP+SV +N+  +
Sbjct: 248 TEDDYSYR---GHMQACSFSPEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGM 304

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY     R     CSP+ + HAVLLVGYG + DIP+W  +NSWG    ++G++ + RG+
Sbjct: 305 QFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHRGS 364

Query: 578 NACGIEQIAGYATID 592
            ACG+  +A  A +D
Sbjct: 365 GACGVNTMASSAVVD 379



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 157/317 (49%), Gaps = 28/317 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   F+ F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 78  MASIFRNFVITYNRTYESKEEAQWRLSIFAHNMVRAQKIQALDRGTAQYGVTKFSDLTEE 137

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV-PDAWDWRKKNVTGPAGDQAAC 763
           E           RT       RE+  K + + +  G + P  WDWR K       DQ  C
Sbjct: 138 EF----------RTIYLNPLLREEPGKKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMC 187

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAG 820
           GSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  G
Sbjct: 188 GSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKIDKACMGGL--PSSAYSAIKNLGG 245

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           LE+E DY Y+   G    C++   K K++           + +   L K GP+SV +N+ 
Sbjct: 246 LETEDDYSYR---GHMQACSFSPEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAF 302

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +  Y     R     CSP+ + HAVLLVGYG + +IP+W ++NSWG    ++G++ + R
Sbjct: 303 GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHR 362

Query: 941 GNNACGIEQIAGYATID 957
           G+ ACG+  +A  A +D
Sbjct: 363 GSGACGVNTMASSAVVD 379



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 118/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 166 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKID 225

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C++   K K++         
Sbjct: 226 KACMGGL--PSSAYSAIKNLGGLETEDDYSYR---GHMQACSFSPEKAKVYINDSVELSQ 280

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + +IP
Sbjct: 281 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIP 340

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 341 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 379



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + DIP+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 319  CSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 378

Query: 1025 D 1025
            D
Sbjct: 379  D 379


>gi|359806140|ref|NP_001241450.1| uncharacterized protein LOC100778716 precursor [Glycine max]
 gi|255639509|gb|ACU20049.1| unknown [Glycine max]
          Length = 366

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 159/339 (46%), Gaps = 48/339 (14%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPE 704
           N    F AF  K G+ YA  EE   RF  FK +    K H++      +G + FSD +P 
Sbjct: 46  NAEHHFSAFKTKFGKTYATQEEHDHRFRIFKNNLLRAKSHQKLDPSAVHGVTRFSDLTPA 105

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E           R +  +   R   +     +     +P  +DWR+        +Q +CG
Sbjct: 106 EF---------RRQFLGLKPLRLPSDAQKAPILPTNDLPTDFDWREHGAVTGVKNQGSCG 156

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCW+FS  G LEG + + TG+LV  S+ QLV+C  +C         SGC+G     + EY
Sbjct: 157 SCWSFSAVGALEGAHFLSTGELVSLSEQQLVDCDHECDPEERGACDSGCNGGLMTTAFEY 216

Query: 816 THQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
           T QAG L  EKDYPY     ++  C +DKSKV        +     E +   L + GPL+
Sbjct: 217 TLQAGGLMREKDYPYTGR--DRGPCKFDKSKVAASVANFSVVSLDEEQIAANLVQNGPLA 274

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVR 923
           V +N+  +  Y G           PY     L H VLLVGYG       +    PYW+++
Sbjct: 275 VGINAVFMQTYIGG-------VSCPYICGKHLDHGVLLVGYGSGAYAPIRFKEKPYWIIK 327

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVVKN 961
           NSWG    +EG++KI RG N CG++  ++  A I V  N
Sbjct: 328 NSWGESWGEEGYYKICRGRNVCGVDSMVSTVAAIHVSNN 366



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 159/336 (47%), Gaps = 47/336 (13%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPE 338
           N    F AF  K G+ YA  EE   RF  FK +    K H++      +G + FSD +P 
Sbjct: 46  NAEHHFSAFKTKFGKTYATQEEHDHRFRIFKNNLLRAKSHQKLDPSAVHGVTRFSDLTPA 105

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E           R +  +   R   +     +     +P  +DWR+        +Q +CG
Sbjct: 106 EF---------RRQFLGLKPLRLPSDAQKAPILPTNDLPTDFDWREHGAVTGVKNQGSCG 156

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEY 450
           SCW+FS  G LEG + + TG+LV  S+ QLV+C  +C       C  GC+G  +    EY
Sbjct: 157 SCWSFSAVGALEGAHFLSTGELVSLSEQQLVDCDHECDPEERGACDSGCNGGLMTTAFEY 216

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
           T QA GL  EKDYPY     ++  C +DKSKV        +     E +   L + GPL+
Sbjct: 217 TLQAGGLMREKDYPYT--GRDRGPCKFDKSKVAASVANFSVVSLDEEQIAANLVQNGPLA 274

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLAR 558
           VG+N+  +  Y G           PY     L H VLLVGYG       +  + PYW+ +
Sbjct: 275 VGINAVFMQTYIGG-------VSCPYICGKHLDHGVLLVGYGSGAYAPIRFKEKPYWIIK 327

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDV 593
           NSWG    +EG++KI RG N CG++  ++  A I V
Sbjct: 328 NSWGESWGEEGYYKICRGRNVCGVDSMVSTVAAIHV 363



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 122/239 (51%), Gaps = 31/239 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+        +Q  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 134 LPTDFDWREHGAVTGVKNQGSCGSCWSFSAVGALEGAHFLSTGELVSLSEQQLVDCDHEC 193

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT QA GL  EKDYPY     ++  C +DKSKV     
Sbjct: 194 DPEERGACDSGCNGGLMTTAFEYTLQAGGLMREKDYPYTGR--DRGPCKFDKSKVAASVA 251

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L + GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 252 NFSVVSLDEEQIAANLVQNGPLAVGINAVFMQTYIGG-------VSCPYICGKHLDHGVL 304

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDV 227
           LVGYG       +    PYW+++NSWG    +EG++KI RG N CG++  ++  A I V
Sbjct: 305 LVGYGSGAYAPIRFKEKPYWIIKNSWGESWGEEGYYKICRGRNVCGVDSMVSTVAAIHV 363



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  A GI  +     I  V     C  + L H VLLVGYG       +  + PYW++
Sbjct: 268  VQNGPLAVGINAVFMQTYIGGVSCPYICGKH-LDHGVLLVGYGSGAYAPIRFKEKPYWII 326

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDV 1026
            +NSWG    +EG++KI RG N CG++  ++  A I V
Sbjct: 327  KNSWGESWGEEGYYKICRGRNVCGVDSMVSTVAAIHV 363


>gi|3916212|gb|AAC78838.1| cathepsin F [Homo sapiens]
          Length = 338

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 147/314 (46%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 37  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 96

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 97  EF---------RTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 147

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+
Sbjct: 148 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLET 207

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY Y+   G    C +   K K++           + +   L K GP+SV +N+  + 
Sbjct: 208 EDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQ 264

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY     R     CSP+ + HAVLLVGYG + D+P+W  +NSWG    ++G++ + RG+ 
Sbjct: 265 FYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSG 324

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A +D
Sbjct: 325 ACGVNTMASSAVVD 338



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 151/316 (47%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 37  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 96

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 97  EF---------RTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 147

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  GL
Sbjct: 148 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGL 205

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y+   G    C +   K K++           + +   L K GP+SV +N+  
Sbjct: 206 ETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFG 262

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y     R     CSP+ + HAVLLVGYG + ++P+W ++NSWG    ++G++ + RG
Sbjct: 263 MQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRG 322

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A +D
Sbjct: 323 SGACGVNTMASSAVVD 338



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 125 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 184

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 185 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 239

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 240 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 299

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 300 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 338



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 278  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 337

Query: 1025 D 1025
            D
Sbjct: 338  D 338


>gi|321460289|gb|EFX71333.1| hypothetical protein DAPPUDRAFT_189155 [Daphnia pulex]
          Length = 266

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 151/274 (55%), Gaps = 22/274 (8%)

Query: 693 YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           YG + FSD S  E      GF  S R      ++    +  + E++    +PD +DWR  
Sbjct: 6   YGDTPFSDWSAAEYKAHLAGFNPSLRQ-----SNARLRQAAIPEID----LPDEFDWRNH 56

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
           +V  P  DQ +CGSCWAFS+ G +EG YA++ G L+  S+ +LV+C K  SGC+G   E 
Sbjct: 57  SVVTPVKDQGSCGSCWAFSVTGNVEGIYAVRNGDLLSLSEQELVDCDKLDSGCNGGLPEN 116

Query: 812 SIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYK 869
           + +  H   GLE+E DYPY   NG + KC ++ +  ++  TG   +  N +E M + L +
Sbjct: 117 AYKAIHDIGGLETESDYPY---NGHENKCKFNSNITRVQVTGGVEISTNETE-MAQWLIQ 172

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVR 923
            GP+S+ +N++ +  Y G         C P  + H VL+VGYG          +PYW+V+
Sbjct: 173 NGPISIGINANAMQYYRGGVSHPWKVLCRPGGIDHGVLIVGYGVSQYPKFNKTLPYWIVK 232

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           NSWG    ++G++++ RG+  CG+ Q+   AT+D
Sbjct: 233 NSWGTRWGEQGYYRVFRGDGTCGLNQMCTSATLD 266



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 152/276 (55%), Gaps = 25/276 (9%)

Query: 327 YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           YG + FSD S  E      GF  S R      ++    +  + E++    +PD +DWR  
Sbjct: 6   YGDTPFSDWSAAEYKAHLAGFNPSLRQ-----SNARLRQAAIPEID----LPDEFDWRNH 56

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL- 444
           +V  P  DQ +CGSCWAFS+ G +EG YA++ G L+  S+ +LV+C K  SGC G  GL 
Sbjct: 57  SVVTPVKDQGSCGSCWAFSVTGNVEGIYAVRNGDLLSLSEQELVDCDKLDSGCNG--GLP 114

Query: 445 EQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKIL 502
           E   +  H   GLE+E DYPY   NG + KC ++ +  ++  TG   +  N +E M + L
Sbjct: 115 ENAYKAIHDIGGLETESDYPY---NGHENKCKFNSNITRVQVTGGVEISTNETE-MAQWL 170

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWL 556
            + GP+S+G+N++ + +Y G         C P  + H VL+VGYG          +PYW+
Sbjct: 171 IQNGPISIGINANAMQYYRGGVSHPWKVLCRPGGIDHGVLIVGYGVSQYPKFNKTLPYWI 230

Query: 557 ARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
            +NSWG    ++G++++ RG+  CG+ Q+   AT+D
Sbjct: 231 VKNSWGTRWGEQGYYRVFRGDGTCGLNQMCTSATLD 266



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 131/224 (58%), Gaps = 12/224 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR  +V  P  DQ  CGSCWAFS+ G +EG YA++ G L+  S+ +LV+C K  
Sbjct: 47  LPDEFDWRNHSVVTPVKDQGSCGSCWAFSVTGNVEGIYAVRNGDLLSLSEQELVDCDKLD 106

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG 128
           SGC+G   E + +  H   GLE+E DYPY   NG + KC ++ +  ++  TG   +  N 
Sbjct: 107 SGCNGGLPENAYKAIHDIGGLETESDYPY---NGHENKCKFNSNITRVQVTGGVEISTNE 163

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD---- 184
           +E M + L + GP+S+ +N++ +  Y G         C P  + H VL+VGYG       
Sbjct: 164 TE-MAQWLIQNGPISIGINANAMQYYRGGVSHPWKVLCRPGGIDHGVLIVGYGVSQYPKF 222

Query: 185 --NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
              +PYW+V+NSWG    ++G++++ RG+  CG+ Q+   AT+D
Sbjct: 223 NKTLPYWIVKNSWGTRWGEQGYYRVFRGDGTCGLNQMCTSATLD 266



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 6/67 (8%)

Query: 965  CSPYDLGHAVLLVGYGKQD------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            C P  + H VL+VGYG          +PYW+V+NSWG    ++G++++ RG+  CG+ Q+
Sbjct: 200  CRPGGIDHGVLIVGYGVSQYPKFNKTLPYWIVKNSWGTRWGEQGYYRVFRGDGTCGLNQM 259

Query: 1019 AGYATID 1025
               AT+D
Sbjct: 260  CTSATLD 266


>gi|119594953|gb|EAW74547.1| cathepsin F, isoform CRA_a [Homo sapiens]
 gi|119594954|gb|EAW74548.1| cathepsin F, isoform CRA_a [Homo sapiens]
          Length = 392

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 157/337 (46%), Gaps = 22/337 (6%)

Query: 266 DQVVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 324
           ++  + V +L  E  L+ D    +   FK F++   R Y + EE + R   F  +  +  
Sbjct: 68  NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ 127

Query: 325 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
           +         +YG ++FSD + EE             Y   +  +E   KM         
Sbjct: 128 KIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNTLLRKEPGNKMKQAKSVGDL 178

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 179 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 238

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
             C G           +  GLE+E DY Y+   G    C +   K K++           
Sbjct: 239 KACMGGLPSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNE 295

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           + +   L K GP+SV +N+  + FY     R     CSP+ + HAVLLVGYG + D+P+W
Sbjct: 296 QKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFW 355

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
             +NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 356 AIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 392



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 161/339 (47%), Gaps = 27/339 (7%)

Query: 632 DQVVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 690
           ++  + V +L  E  L+ D    +   FK F++   R Y + EE + R   F  +  +  
Sbjct: 68  NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ 127

Query: 691 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
           +         +YG ++FSD + EE             Y   +  +E   KM         
Sbjct: 128 KIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNTLLRKEPGNKMKQAKSVGDL 178

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 179 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 238

Query: 802 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 239 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 293

Query: 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 294 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 353

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 354 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 392



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 179 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 238

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 239 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 293

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 294 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 353

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 354 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 392



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 332  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 391

Query: 1025 D 1025
            D
Sbjct: 392  D 392


>gi|4757570|gb|AAD29084.1|AF082181_1 cysteine proteinase precursor [Solanum melongena]
          Length = 363

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 174/367 (47%), Gaps = 64/367 (17%)

Query: 628 DRITDQVVARVDTLAIEGSLTFDNE--NILETFKAFIVKRGRQYANDEEIKERFEYFKQD 685
           D +  QVV+  D          DN   N    F  F  K G+ YA+ EE   R + FK +
Sbjct: 25  DPLIRQVVSETD----------DNHMLNAEHHFSLFKSKYGKIYASQEEHDHRLKVFKAN 74

Query: 686 GHK--KHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 737
             +  +H+       +G ++FSD +P E           RTY  +   R K+      + 
Sbjct: 75  LRRARRHQLLDPTAEHGITQFSDLTPSEF---------RRTYLGLHKPRPKLNAQKAPIL 125

Query: 738 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 797
               +P+ +DWR+K       +Q +CGSCW+FS  G +EG + + TG+LV  S+ QLV+C
Sbjct: 126 PTSDLPEDFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDC 185

Query: 798 AKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVK 847
             +C         +GC+G     + EYT +A GL+ EKDYPY   +G   KC +DKSK+ 
Sbjct: 186 DHECDAEEKSECDAGCNGGLMTTAFEYTLKAGGLQREKDYPYTGRDG---KCHFDKSKIA 242

Query: 848 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN---GTPI---RKNDETCSPYD 901
                  +     + +   L K+GPL+V +N+  +  Y      P+   ++ D       
Sbjct: 243 ASVANFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYMRGVSCPLICFKRQD------- 295

Query: 902 LGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 954
             H VLLVGYG       +    PYW+++NSWG    + G++KI RG+N CG++ +    
Sbjct: 296 --HGVLLVGYGSAGFAPIRLKEKPYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTV 353

Query: 955 TIDVVKN 961
           T     N
Sbjct: 354 TATHTTN 360



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 175/361 (48%), Gaps = 63/361 (17%)

Query: 262 DRITDQVVARVDTLAIEGSLTFDNE--NILETFKAFIVKRGRQYANDEEIKERFEYFKQD 319
           D +  QVV+  D          DN   N    F  F  K G+ YA+ EE   R + FK +
Sbjct: 25  DPLIRQVVSETD----------DNHMLNAEHHFSLFKSKYGKIYASQEEHDHRLKVFKAN 74

Query: 320 GHK--KHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 371
             +  +H+       +G ++FSD +P E           RTY  +   R K+      + 
Sbjct: 75  LRRARRHQLLDPTAEHGITQFSDLTPSEF---------RRTYLGLHKPRPKLNAQKAPIL 125

Query: 372 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 431
               +P+ +DWR+K       +Q +CGSCW+FS  G +EG + + TG+LV  S+ QLV+C
Sbjct: 126 PTSDLPEDFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDC 185

Query: 432 AKQC-----SGC-GGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVK 482
             +C     S C  GC+G  +    EYT +A GL+ EKDYPY   +G   KC +DKSK+ 
Sbjct: 186 DHECDAEEKSECDAGCNGGLMTTAFEYTLKAGGLQREKDYPYTGRDG---KCHFDKSKIA 242

Query: 483 LFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN---GTPI---RKNDETCSPYD 536
                  +     + +   L K+GPL+VG+N+  +  Y      P+   ++ D       
Sbjct: 243 ASVANFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYMRGVSCPLICFKRQD------- 295

Query: 537 LGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 589
             H VLLVGYG       +  + PYW+ +NSWG    + G++KI RG+N CG++ +    
Sbjct: 296 --HGVLLVGYGSAGFAPIRLKEKPYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTV 353

Query: 590 T 590
           T
Sbjct: 354 T 354



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 35/237 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K       +Q  CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C
Sbjct: 130 LPEDFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHEC 189

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC+G     + EYT +A GL+ EKDYPY   +G   KC +DKSK+     
Sbjct: 190 DAEEKSECDAGCNGGLMTTAFEYTLKAGGLQREKDYPYTGRDG---KCHFDKSKIAASVA 246

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN---GTPI---RKNDETCSPYDLGHA 174
              +     + +   L K+GPL+V +N+  +  Y      P+   ++ D         H 
Sbjct: 247 NFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYMRGVSCPLICFKRQD---------HG 297

Query: 175 VLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           VLLVGYG       +    PYW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 298 VLLVGYGSAGFAPIRLKEKPYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 354



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 7/59 (11%)

Query: 972  HAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            H VLLVGYG       +  + PYW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 296  HGVLLVGYGSAGFAPIRLKEKPYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 354


>gi|170032975|ref|XP_001844355.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167873312|gb|EDS36695.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1454

 Score =  166 bits (420), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 163/323 (50%), Gaps = 36/323 (11%)

Query: 292  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHE----RYGTSEFSDRSPEEILC 342
            F  F  +  R Y +  E + RF  FK +  K     K+E    +YG + F+D +  E   
Sbjct: 1146 FDKFKTRHNRTYQSSLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYGITHFADMTSAEYRA 1205

Query: 343  KTGFKWSERTYERIVADRE-----KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
            +TG          +V  RE      +   + E+++   +PDA+DWR+        +Q  C
Sbjct: 1206 RTG----------LVVPREGDEVNHIRNPMAEIDEHMELPDAFDWRELGAVSEVKNQGNC 1255

Query: 398  GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
            GSCWAFS+ G +EG + +KT KL E+S+ +L++C    S C G   D   + IE     G
Sbjct: 1256 GSCWAFSVVGNIEGLHQVKTKKLEEYSEQELLDCDTVDSACNGGFMDDAYKAIEKI--GG 1313

Query: 456  LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
            LE E +YPY     ++  C ++K+   +              + + L   GP+S+GLN++
Sbjct: 1314 LELESEYPYL--AKKQKTCHFNKTMAHVRVKGAVDLPKNETAIAQFLVANGPVSIGLNAN 1371

Query: 516  LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEG 569
             + FY G         CS  +L H VL+VGYG ++       +PYW+ +NSWGP   ++G
Sbjct: 1372 AMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEYPMFNKTLPYWIVKNSWGPKWGEQG 1431

Query: 570  FFKIERGNNACGIEQIAGYATID 592
            ++++ RG+N CG+ ++A  A ++
Sbjct: 1432 YYRVFRGDNTCGVSEMATSAVLE 1454



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 170/322 (52%), Gaps = 35/322 (10%)

Query: 658  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHE----RYGTSEFSDRSPEEILC 708
            F  F  +  R Y +  E + RF  FK +  K     K+E    +YG + F+D +  E   
Sbjct: 1146 FDKFKTRHNRTYQSSLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYGITHFADMTSAEYRA 1205

Query: 709  KTGFKWSERTYERIVADRE-----KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
            +TG          +V  RE      +   + E+++   +PDA+DWR+        +Q  C
Sbjct: 1206 RTG----------LVVPREGDEVNHIRNPMAEIDEHMELPDAFDWRELGAVSEVKNQGNC 1255

Query: 764  GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLE 822
            GSCWAFS+ G +EG + +KT KL E+S+ +L++C    S C+G F + + +   +  GLE
Sbjct: 1256 GSCWAFSVVGNIEGLHQVKTKKLEEYSEQELLDCDTVDSACNGGFMDDAYKAIEKIGGLE 1315

Query: 823  SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDL 881
             E +YPY  A  +K  C ++K+   +   K  +    +ET + + L   GP+S+ LN++ 
Sbjct: 1316 LESEYPYL-AKKQK-TCHFNKTMAHVRV-KGAVDLPKNETAIAQFLVANGPVSIGLNANA 1372

Query: 882  IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGF 935
            +  Y G         CS  +L H VL+VGYG ++       +PYW+V+NSWGP   ++G+
Sbjct: 1373 MQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEYPMFNKTLPYWIVKNSWGPKWGEQGY 1432

Query: 936  FKIERGNNACGIEQIAGYATID 957
            +++ RG+N CG+ ++A  A ++
Sbjct: 1433 YRVFRGDNTCGVSEMATSAVLE 1454



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 137/233 (58%), Gaps = 11/233 (4%)

Query: 2    LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
            + E+++   +PDA+DWR+        +Q +CGSCWAFS+ G +EG + +KT KL E+S+ 
Sbjct: 1225 MAEIDEHMELPDAFDWRELGAVSEVKNQGNCGSCWAFSVVGNIEGLHQVKTKKLEEYSEQ 1284

Query: 62   QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
            +L++C    S C+G F + + +   +  GLE E +YPY  A  +K  C ++K+   +   
Sbjct: 1285 ELLDCDTVDSACNGGFMDDAYKAIEKIGGLELESEYPYL-AKKQK-TCHFNKTMAHVRV- 1341

Query: 121  KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
            K  +    +ET + + L   GP+S+ LN++ +  Y G         CS  +L H VL+VG
Sbjct: 1342 KGAVDLPKNETAIAQFLVANGPVSIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVG 1401

Query: 180  YGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            YG ++       +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A ++
Sbjct: 1402 YGVKEYPMFNKTLPYWIVKNSWGPKWGEQGYYRVFRGDNTCGVSEMATSAVLE 1454



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 6/67 (8%)

Query: 965  CSPYDLGHAVLLVGYGKQD------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            CS  +L H VL+VGYG ++       +PYW+V+NSWGP   ++G++++ RG+N CG+ ++
Sbjct: 1388 CSKKNLDHGVLIVGYGVKEYPMFNKTLPYWIVKNSWGPKWGEQGYYRVFRGDNTCGVSEM 1447

Query: 1019 AGYATID 1025
            A  A ++
Sbjct: 1448 ATSAVLE 1454


>gi|46309423|ref|YP_006313.1| ORF31 [Agrotis segetum granulovirus]
 gi|46200640|gb|AAS82707.1| ORF31 [Agrotis segetum granulovirus]
          Length = 327

 Score =  166 bits (420), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 101/317 (31%), Positives = 177/317 (55%), Gaps = 22/317 (6%)

Query: 643 IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YG 694
           ++G+L   N++  + F+ F+ K  + Y+++EE + +F+ FK +    +E+        Y 
Sbjct: 11  VQGALYNLNDS-EKLFEDFVQKYNKSYSSEEERQIKFDNFKNNIRSINEKNSLSNSAVYD 69

Query: 695 TSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
            + +SD +  E+L K TGFK + +     ++   K  K L+       +PD++DWR ++V
Sbjct: 70  INFYSDMNKNELLRKQTGFKINLKKNNLDLSWNIKCNKKLINGNPAVLLPDSFDWRDRHV 129

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI 813
                +Q  CGSCWAFS    +E  YAIK  KL++ S+ QLV C +Q +GC+G     ++
Sbjct: 130 ITSVKNQRDCGSCWAFSTIANIESLYAIKYNKLLDLSEQQLVNCDEQNNGCNGGLMHWAM 189

Query: 814 -EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGP 872
            E   Q G+ +E D+PY  ++G    C   +  V +     F+  +  + ++++L   GP
Sbjct: 190 EEIIRQGGVSNETDFPYTASDG---FCKRKQGFVNINGCNQFI-LSNEDRLRELLIFNGP 245

Query: 873 LSVLLNSDLIHDYNG--TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           +S+ ++   + DY+   +   +ND       L HAVLLVGYG ++NIPYW+++NSWG   
Sbjct: 246 ISIAIDVIDVIDYSQGISSTCRNDN-----GLNHAVLLVGYGVKNNIPYWILKNSWGSQW 300

Query: 931 PDEGFFKIERGNNACGI 947
            + G+F+++R  N+CG+
Sbjct: 301 GENGYFRVQRNINSCGM 317



 Score =  159 bits (401), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 101/317 (31%), Positives = 172/317 (54%), Gaps = 21/317 (6%)

Query: 277 IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YG 328
           ++G+L   N++  + F+ F+ K  + Y+++EE + +F+ FK +    +E+        Y 
Sbjct: 11  VQGALYNLNDS-EKLFEDFVQKYNKSYSSEEERQIKFDNFKNNIRSINEKNSLSNSAVYD 69

Query: 329 TSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
            + +SD +  E+L K TGFK + +     ++   K  K L+       +PD++DWR ++V
Sbjct: 70  INFYSDMNKNELLRKQTGFKINLKKNNLDLSWNIKCNKKLINGNPAVLLPDSFDWRDRHV 129

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQP 447
                +Q  CGSCWAFS    +E  YAIK  KL++ S+ QLV C +Q +GC G       
Sbjct: 130 ITSVKNQRDCGSCWAFSTIANIESLYAIKYNKLLDLSEQQLVNCDEQNNGCNGGLMHWAM 189

Query: 448 IEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGP 507
            E   Q G+ +E D+PY   +G    C   +  V +     F+  N  + ++++L   GP
Sbjct: 190 EEIIRQGGVSNETDFPYTASDG---FCKRKQGFVNINGCNQFILSN-EDRLRELLIFNGP 245

Query: 508 LSVGLNS-HLIHFYNG-TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           +S+ ++   +I +  G +   +ND       L HAVLLVGYG +++IPYW+ +NSWG   
Sbjct: 246 ISIAIDVIDVIDYSQGISSTCRNDN-----GLNHAVLLVGYGVKNNIPYWILKNSWGSQW 300

Query: 566 PDEGFFKIERGNNACGI 582
            + G+F+++R  N+CG+
Sbjct: 301 GENGYFRVQRNINSCGM 317



 Score =  149 bits (376), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 125/209 (59%), Gaps = 12/209 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD++DWR ++V     +Q DCGSCWAFS    +E  YAIK  KL++ S+ QLV C +Q 
Sbjct: 118 LPDSFDWRDRHVITSVKNQRDCGSCWAFSTIANIESLYAIKYNKLLDLSEQQLVNCDEQN 177

Query: 71  SGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           +GC+G     ++ E   Q G+ +E D+PY  ++G    C   +  V +     F+  +  
Sbjct: 178 NGCNGGLMHWAMEEIIRQGGVSNETDFPYTASDG---FCKRKQGFVNINGCNQFI-LSNE 233

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNG--TPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
           + ++++L   GP+S+ ++   + DY+   +   +ND       L HAVLLVGYG ++NIP
Sbjct: 234 DRLRELLIFNGPISIAIDVIDVIDYSQGISSTCRNDN-----GLNHAVLLVGYGVKNNIP 288

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           YW+++NSWG    + G+F+++R  N+CG+
Sbjct: 289 YWILKNSWGSQWGENGYFRVQRNINSCGM 317



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/46 (52%), Positives = 37/46 (80%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            L HAVLLVGYG +++IPYW+++NSWG    + G+F+++R  N+CG+
Sbjct: 272  LNHAVLLVGYGVKNNIPYWILKNSWGSQWGENGYFRVQRNINSCGM 317


>gi|311247276|ref|XP_003122571.1| PREDICTED: cathepsin W-like [Sus scrofa]
          Length = 367

 Score =  166 bits (420), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 163/340 (47%), Gaps = 40/340 (11%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           E F  F ++  R Y+N  E   R + F Q+  K             +G + FSD + EE 
Sbjct: 40  EVFTLFQIQYNRSYSNPAEHARRLDIFAQNLAKAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEV---EKDGPVPDAWDWRKK-NVTGPAGDQAA 762
               G  W             K   M ++V   E    VP + DWRKK  V      Q  
Sbjct: 100 GQLHGHHWGA----------GKAPSMGIKVGSEESGETVPQSCDWRKKPGVISAIKHQKD 149

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGL 821
           C  CWA +    +E Q+AIK  + V+ S  Q+++C +  +GC+G F ++  +   + +GL
Sbjct: 150 CNCCWAMAAVDNVEAQWAIKYHQAVQLSVQQVLDCDRCGNGCNGGFVWDAFLTVLNTSGL 209

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSD 880
            SE+DYPYK         A    KV     +DFL     E ++ + L   GP++V +N+ 
Sbjct: 210 ASEQDYPYKGTVKTHRCLAKQHRKVAWI--QDFLMLQFCEQSIARYLATEGPITVTINAG 267

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-----------DNIPYWLVRNSWGPI 929
           L+  Y    IR    TC P+ + H+VLLVG+GK             +IPYW+++NSWGP 
Sbjct: 268 LLQQYKRGVIRATPATCDPHLVNHSVLLVGFGKSKSVEGRRPRPGHSIPYWILKNSWGPD 327

Query: 930 GPDEGFFKIERGNNACGIEQIAGYATID--VVKNDETCSP 967
             +EG+F++ RG+N CGI +    A +D  V K+  +C P
Sbjct: 328 WGEEGYFRLHRGSNTCGITKYPVTARVDKPVKKHQISCPP 367



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 159/333 (47%), Gaps = 37/333 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           E F  F ++  R Y+N  E   R + F Q+  K             +G + FSD + EE 
Sbjct: 40  EVFTLFQIQYNRSYSNPAEHARRLDIFAQNLAKAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEV---EKDGPVPDAWDWRKK-NVTGPAGDQAA 396
               G  W             K   M ++V   E    VP + DWRKK  V      Q  
Sbjct: 100 GQLHGHHWGA----------GKAPSMGIKVGSEESGETVPQSCDWRKKPGVISAIKHQKD 149

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGL 456
           C  CWA +    +E Q+AIK  + V+ S  Q+++C +  +GC G    +  +   + +GL
Sbjct: 150 CNCCWAMAAVDNVEAQWAIKYHQAVQLSVQQVLDCDRCGNGCNGGFVWDAFLTVLNTSGL 209

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSH 515
            SE+DYPY+ G  +  +C   K   K+   +DFL     E ++ + L   GP++V +N+ 
Sbjct: 210 ASEQDYPYK-GTVKTHRC-LAKQHRKVAWIQDFLMLQFCEQSIARYLATEGPITVTINAG 267

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-----------DDIPYWLARNSWGPI 564
           L+  Y    IR    TC P+ + H+VLLVG+GK              IPYW+ +NSWGP 
Sbjct: 268 LLQQYKRGVIRATPATCDPHLVNHSVLLVGFGKSKSVEGRRPRPGHSIPYWILKNSWGPD 327

Query: 565 GPDEGFFKIERGNNACGIEQIAGYATIDVVIQR 597
             +EG+F++ RG+N CGI +    A +D  +++
Sbjct: 328 WGEEGYFRLHRGSNTCGITKYPVTARVDKPVKK 360



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 128/235 (54%), Gaps = 16/235 (6%)

Query: 11  VPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           VP + DWRKK  V      Q DC  CWA +    +E Q+AIK  + V+ S  Q+++C + 
Sbjct: 128 VPQSCDWRKKPGVISAIKHQKDCNCCWAMAAVDNVEAQWAIKYHQAVQLSVQQVLDCDRC 187

Query: 70  CSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
            +GC+G F ++  +   + +GL SE+DYPYK         A    KV     +DFL    
Sbjct: 188 GNGCNGGFVWDAFLTVLNTSGLASEQDYPYKGTVKTHRCLAKQHRKVAWI--QDFLMLQF 245

Query: 129 SE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ---- 183
            E ++ + L   GP++V +N+ L+  Y    IR    TC P+ + H+VLLVG+GK     
Sbjct: 246 CEQSIARYLATEGPITVTINAGLLQQYKRGVIRATPATCDPHLVNHSVLLVGFGKSKSVE 305

Query: 184 -------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQR 231
                   +IPYW+++NSWGP   +EG+F++ RG+N CGI +    A +D  +++
Sbjct: 306 GRRPRPGHSIPYWILKNSWGPDWGEEGYFRLHRGSNTCGITKYPVTARVDKPVKK 360



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 11/73 (15%)

Query: 964  TCSPYDLGHAVLLVGYGKQ-----------DDIPYWLVRNSWGPIGPDEGFFKIERGNNA 1012
            TC P+ + H+VLLVG+GK              IPYW+++NSWGP   +EG+F++ RG+N 
Sbjct: 283  TCDPHLVNHSVLLVGFGKSKSVEGRRPRPGHSIPYWILKNSWGPDWGEEGYFRLHRGSNT 342

Query: 1013 CGIEQIAGYATID 1025
            CGI +    A +D
Sbjct: 343  CGITKYPVTARVD 355


>gi|355751926|gb|EHH56046.1| Cathepsin F, partial [Macaca fascicularis]
          Length = 381

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 146/314 (46%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 80  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 139

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +   E   KM          P  WDWR K       DQ  CG
Sbjct: 140 EF---------RTIYLNPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 190

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+
Sbjct: 191 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLET 250

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY YR   G    C +   K K++           + +   L K GP+SV +N+  + 
Sbjct: 251 EDDYSYR---GHMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGMQ 307

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY     R     CSP+ + HAVLLVGYG + DIP+W  +NSWG    ++G++ + RG+ 
Sbjct: 308 FYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHRGSG 367

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A +D
Sbjct: 368 ACGVNTMASSAVVD 381



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 150/316 (47%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 80  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 139

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +   E   KM          P  WDWR K       DQ  CG
Sbjct: 140 EF---------RTIYLNPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 190

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  GL
Sbjct: 191 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGL 248

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y+   G    C +   K K++           + +   L K GP+SV +N+  
Sbjct: 249 ETEDDYSYR---GHMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFG 305

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y     R     CSP+ + HAVLLVGYG + +IP+W ++NSWG    ++G++ + RG
Sbjct: 306 MQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHRG 365

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A +D
Sbjct: 366 SGACGVNTMASSAVVD 381



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 168 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 227

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 228 KACMGGL--PSNAYSAIKNLGGLETEDDYSYR---GHMQACNFSAEKAKVYINDSVELSQ 282

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + +IP
Sbjct: 283 NEQKLAAWLAKKGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIP 342

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 343 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 381



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + DIP+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 321  CSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 380

Query: 1025 D 1025
            D
Sbjct: 381  D 381


>gi|3916214|gb|AAC78839.1| cathepsin F [Homo sapiens]
          Length = 302

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 147/314 (46%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 1   MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 60

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 61  EF---------RTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 111

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+
Sbjct: 112 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLET 171

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY Y+   G    C +   K K++           + +   L K GP+SV +N+  + 
Sbjct: 172 EDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQ 228

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY     R     CSP+ + HAVLLVGYG + D+P+W  +NSWG    ++G++ + RG+ 
Sbjct: 229 FYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSG 288

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A +D
Sbjct: 289 ACGVNTMASSAVVD 302



 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 151/316 (47%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 1   MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 60

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 61  EF---------RTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 111

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  GL
Sbjct: 112 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGL 169

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y+   G    C +   K K++           + +   L K GP+SV +N+  
Sbjct: 170 ETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFG 226

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y     R     CSP+ + HAVLLVGYG + ++P+W ++NSWG    ++G++ + RG
Sbjct: 227 MQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRG 286

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A +D
Sbjct: 287 SGACGVNTMASSAVVD 302



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 89  APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 148

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 149 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 203

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 204 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 263

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 264 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 302



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 242  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 301

Query: 1025 D 1025
            D
Sbjct: 302  D 302


>gi|30575716|gb|AAP33050.1| cysteine proteinase 3 [Clonorchis sinensis]
 gi|358339353|dbj|GAA47433.1| cathepsin F [Clonorchis sinensis]
          Length = 327

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 164/326 (50%), Gaps = 22/326 (6%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 325
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
              GP  DQ  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C +   GC G    +
Sbjct: 124 GAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDEVDEGCNGGTPQQ 183

Query: 446 QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKY 505
              +     GL+ + DYPY    G + +C    SKVK++     +     +   ++L + 
Sbjct: 184 AFKQILGMGGLQLDSDYPYE---GREGQCRMVPSKVKVYINGSKILPEDEQIQAQMLKET 240

Query: 506 GPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           GPLS  LN+  + FY    +      C    L HAVL VGYGK+  +PYW  +NSW  + 
Sbjct: 241 GPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMF 300

Query: 566 PDEGFFKIERGNNACGIEQIAGYATI 591
            + G+F+I RG+  CGI  +   + I
Sbjct: 301 GENGYFRIYRGDGTCGINTLVSTSII 326



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 166/326 (50%), Gaps = 23/326 (7%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 691
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
              GP  DQ  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C +   GC+G   + 
Sbjct: 124 GAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDEVDEGCNGGTPQQ 183

Query: 812 SI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKY 870
           +  +     GL+ + DYPY+   G+   C    SKVK++     +     +   ++L + 
Sbjct: 184 AFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVKVYINGSKILPEDEQIQAQMLKET 240

Query: 871 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           GPLS  LN+  +  Y    +      C    L HAVL VGYGK+  +PYW V+NSW  + 
Sbjct: 241 GPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMF 300

Query: 931 PDEGFFKIERGNNACGIEQIAGYATI 956
            + G+F+I RG+  CGI  +   + I
Sbjct: 301 GENGYFRIYRGDGTCGINTLVSTSII 326



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 118/225 (52%), Gaps = 12/225 (5%)

Query: 10  PVP--------DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           PVP        D +DWR     GP  DQ DCGSCWAFS  G +EGQ+  KT  L++ S+ 
Sbjct: 105 PVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQ 164

Query: 62  QLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           QL++C +   GC+G   + +  +     GL+ + DYPY+   G+   C    SKVK++  
Sbjct: 165 QLLDCDEVDEGCNGGTPQQAFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVKVYIN 221

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
              +     +   ++L + GPLS  LN+  +  Y    +      C    L HAVL VGY
Sbjct: 222 GSKILPEDEQIQAQMLKETGPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGY 281

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 282 GKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 326



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L HAVL VGYGK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 267  CDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 326


>gi|182892046|gb|AAI65744.1| Ctsf protein [Danio rerio]
          Length = 473

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 154/318 (48%), Gaps = 28/318 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +L  FK F++   R Y++ EE ++R   F+Q+                YG ++FSD + +
Sbjct: 171 LLTMFKNFMITYNRTYSSQEEAEKRLRIFQQNMKTAQTLQSLEQGSAEYGITKFSDLTED 230

Query: 339 EI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
           E     L     +WS +            ++M   +    P PD WDWR      P  +Q
Sbjct: 231 EFRMMYLNPMLSQWSLK------------KEMKPAIPASAPAPDTWDWRDHGAVSPVKNQ 278

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQA 454
             CGSCWAFS+ G +EGQ+  KTG+L+  S+ +LV+C K    CGG           +  
Sbjct: 279 GMCGSCWAFSVTGNIEGQWFKKTGQLLSLSEQELVDCDKLDQACGGGLPSNAYEAIENLG 338

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GLE+E DY Y    G K  C +   KV  +           + +   L + GP+S  LN+
Sbjct: 339 GLETETDYSY---TGHKQSCDFSTGKVAAYINSSVELPKDEKEIAAFLAENGPVSAALNA 395

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
             + FY           C+P+ + HAVLLVG+G+++ +P+W  +NSWG    ++G++ + 
Sbjct: 396 FAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGFGQRNGVPFWAIKNSWGEDYGEQGYYYLY 455

Query: 575 RGNNACGIEQIAGYATID 592
           RG+  CGI ++   A ++
Sbjct: 456 RGSGLCGIHKMCSSAIVN 473



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 156/320 (48%), Gaps = 33/320 (10%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +L  FK F++   R Y++ EE ++R   F+Q+                YG ++FSD + +
Sbjct: 171 LLTMFKNFMITYNRTYSSQEEAEKRLRIFQQNMKTAQTLQSLEQGSAEYGITKFSDLTED 230

Query: 705 EI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
           E     L     +WS +            ++M   +    P PD WDWR      P  +Q
Sbjct: 231 EFRMMYLNPMLSQWSLK------------KEMKPAIPASAPAPDTWDWRDHGAVSPVKNQ 278

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---TH 817
             CGSCWAFS+ G +EGQ+  KTG+L+  S+ +LV+C K    C G    PS  Y    +
Sbjct: 279 GMCGSCWAFSVTGNIEGQWFKKTGQLLSLSEQELVDCDKLDQACGGGL--PSNAYEAIEN 336

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             GLE+E DY Y    G K  C +   KV  +           + +   L + GP+S  L
Sbjct: 337 LGGLETETDYSY---TGHKQSCDFSTGKVAAYINSSVELPKDEKEIAAFLAENGPVSAAL 393

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           N+  +  Y           C+P+ + HAVLLVG+G+++ +P+W ++NSWG    ++G++ 
Sbjct: 394 NAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGFGQRNGVPFWAIKNSWGEDYGEQGYYY 453

Query: 938 IERGNNACGIEQIAGYATID 957
           + RG+  CGI ++   A ++
Sbjct: 454 LYRGSGLCGIHKMCSSAIVN 473



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 8/217 (3%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           D WDWR      P  +Q  CGSCWAFS+ G +EGQ+  KTG+L+  S+ +LV+C K    
Sbjct: 262 DTWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIEGQWFKKTGQLLSLSEQELVDCDKLDQA 321

Query: 73  CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           C G    PS  Y    +  GLE+E DY Y    G K  C +   KV  +           
Sbjct: 322 CGGGL--PSNAYEAIENLGGLETETDYSY---TGHKQSCDFSTGKVAAYINSSVELPKDE 376

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           + +   L + GP+S  LN+  +  Y           C+P+ + HAVLLVG+G+++ +P+W
Sbjct: 377 KEIAAFLAENGPVSAALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGFGQRNGVPFW 436

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            ++NSWG    ++G++ + RG+  CGI ++   A ++
Sbjct: 437 AIKNSWGEDYGEQGYYYLYRGSGLCGIHKMCSSAIVN 473



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVLLVG+G+++ +P+W ++NSWG    ++G++ + RG+  CGI ++   A +
Sbjct: 413  CNPWMIDHAVLLVGFGQRNGVPFWAIKNSWGEDYGEQGYYYLYRGSGLCGIHKMCSSAIV 472

Query: 1025 D 1025
            +
Sbjct: 473  N 473


>gi|442736236|gb|AGC65593.1| cathepsin [Achaea janata granulovirus]
          Length = 338

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/321 (34%), Positives = 165/321 (51%), Gaps = 25/321 (7%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQ------DGHKKHER--Y 693
           A+   + +D E+    F  F++K  + Y ++ E   +FE FK+      D + K E   +
Sbjct: 18  ALPAKIHYDLEDAERLFDLFMIKYHKVYRSELERAAKFEVFKRNLATLNDKNDKDENATF 77

Query: 694 GTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKM-LMEVEKDGP---VPDAWDW 748
             + ++DRS  E+L  +TGF   +  + R  +   + + M +  V    P   +P+++DW
Sbjct: 78  DINAYTDRSRNELLRTQTGF---QSNFARNASPFTQKKGMCITRVVAGTPPCLLPESFDW 134

Query: 749 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF 808
           R KNV  P  DQ  CGSCWAF+     E QYAIK GK V+FS+  L++C +   GCDG  
Sbjct: 135 RDKNVVTPVKDQLECGSCWAFTAIANFESQYAIKHGKHVDFSEQHLLDCDQLNYGCDGGL 194

Query: 809 FEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 867
              +  E     G+  E DYPY     E F CA + +     +G         E ++++L
Sbjct: 195 MHWAFEEIIRMGGVVLEYDYPYTGV--ESF-CANNVNMYTTISGCVQYDLRDEEKLRELL 251

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIPYWLVRNSW 926
              GP++V L+   I DY    +      C   + L HAVLLVGYG    I YWL++NSW
Sbjct: 252 VTNGPIAVALDIVDIVDYKSGVV----SFCGTNNGLNHAVLLVGYGVDKTIEYWLLKNSW 307

Query: 927 GPIGPDEGFFKIERGNNACGI 947
           G    +EG+F+I+R  N+CGI
Sbjct: 308 GTDWGEEGYFRIKRNRNSCGI 328



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 161/321 (50%), Gaps = 24/321 (7%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQ------DGHKKHER--Y 327
           A+   + +D E+    F  F++K  + Y ++ E   +FE FK+      D + K E   +
Sbjct: 18  ALPAKIHYDLEDAERLFDLFMIKYHKVYRSELERAAKFEVFKRNLATLNDKNDKDENATF 77

Query: 328 GTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKM-LMEVEKDGP---VPDAWDW 382
             + ++DRS  E+L  +TGF   +  + R  +   + + M +  V    P   +P+++DW
Sbjct: 78  DINAYTDRSRNELLRTQTGF---QSNFARNASPFTQKKGMCITRVVAGTPPCLLPESFDW 134

Query: 383 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCD 442
           R KNV  P  DQ  CGSCWAF+     E QYAIK GK V+FS+  L++C +   GC G  
Sbjct: 135 RDKNVVTPVKDQLECGSCWAFTAIANFESQYAIKHGKHVDFSEQHLLDCDQLNYGCDGGL 194

Query: 443 GLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKIL 502
                 E     G+  E DYPY    G +  CA + +     +G         E ++++L
Sbjct: 195 MHWAFEEIIRMGGVVLEYDYPY---TGVESFCANNVNMYTTISGCVQYDLRDEEKLRELL 251

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDDIPYWLARNSW 561
              GP++V L+   I  Y    +      C   + L HAVLLVGYG    I YWL +NSW
Sbjct: 252 VTNGPIAVALDIVDIVDYKSGVV----SFCGTNNGLNHAVLLVGYGVDKTIEYWLLKNSW 307

Query: 562 GPIGPDEGFFKIERGNNACGI 582
           G    +EG+F+I+R  N+CGI
Sbjct: 308 GTDWGEEGYFRIKRNRNSCGI 328



 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 115/208 (55%), Gaps = 9/208 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+++DWR KNV  P  DQ +CGSCWAF+     E QYAIK GK V+FS+  L++C +  
Sbjct: 128 LPESFDWRDKNVVTPVKDQLECGSCWAFTAIANFESQYAIKHGKHVDFSEQHLLDCDQLN 187

Query: 71  SGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GCDG     +  E     G+  E DYPY     E F CA + +     +G         
Sbjct: 188 YGCDGGLMHWAFEEIIRMGGVVLEYDYPYTGV--ESF-CANNVNMYTTISGCVQYDLRDE 244

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIPY 188
           E ++++L   GP++V L+   I DY    +      C   + L HAVLLVGYG    I Y
Sbjct: 245 EKLRELLVTNGPIAVALDIVDIVDYKSGVV----SFCGTNNGLNHAVLLVGYGVDKTIEY 300

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGI 216
           WL++NSWG    +EG+F+I+R  N+CGI
Sbjct: 301 WLLKNSWGTDWGEEGYFRIKRNRNSCGI 328



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            L HAVLLVGYG    I YWL++NSWG    +EG+F+I+R  N+CGI
Sbjct: 283  LNHAVLLVGYGVDKTIEYWLLKNSWGTDWGEEGYFRIKRNRNSCGI 328


>gi|402892718|ref|XP_003909556.1| PREDICTED: cathepsin F [Papio anubis]
          Length = 460

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 146/314 (46%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 159 MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 218

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +   E   KM          P  WDWR K       DQ  CG
Sbjct: 219 EF---------RTIYLNPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 269

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+
Sbjct: 270 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLET 329

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY YR   G    C +   K K++           + +   L K GP+SV +N+  + 
Sbjct: 330 EDDYSYR---GHMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQ 386

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY     R     CSP+ + HAVLLVGYG + DIP+W  +NSWG    ++G++ + RG+ 
Sbjct: 387 FYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHRGSG 446

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A +D
Sbjct: 447 ACGVNTMASSAVVD 460



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 150/316 (47%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 159 MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 218

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +   E   KM          P  WDWR K       DQ  CG
Sbjct: 219 EF---------RTIYLNPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 269

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  GL
Sbjct: 270 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGL 327

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y+   G    C +   K K++           + +   L K GP+SV +N+  
Sbjct: 328 ETEDDYSYR---GHMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFG 384

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y     R     CSP+ + HAVLLVGYG + +IP+W ++NSWG    ++G++ + RG
Sbjct: 385 MQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHRG 444

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A +D
Sbjct: 445 SGACGVNTMASSAVVD 460



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 247 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 306

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 307 KACMGGL--PSNAYSAIKNLGGLETEDDYSYR---GHMQACNFSAEKAKVYINDSVELSQ 361

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + +IP
Sbjct: 362 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIP 421

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 422 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 460



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + DIP+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 400  CSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 459

Query: 1025 D 1025
            D
Sbjct: 460  D 460


>gi|117606135|ref|NP_001071036.1| cathepsin F precursor [Danio rerio]
 gi|115313533|gb|AAI24244.1| Cathepsin F [Danio rerio]
          Length = 473

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 154/318 (48%), Gaps = 28/318 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +L  FK F++   R Y++ EE ++R   F+Q+                YG ++FSD + +
Sbjct: 171 LLTMFKNFMITYNRTYSSQEEAEKRLRIFQQNMKTAQTLQSLEQGSAEYGITKFSDLTED 230

Query: 339 EI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
           E     L     +WS +            ++M   +    P PD WDWR      P  +Q
Sbjct: 231 EFRMMYLNPMLSQWSLK------------KEMKPAIPASAPAPDTWDWRDHGAVSPVKNQ 278

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQA 454
             CGSCWAFS+ G +EGQ+  KTG+L+  S+ +LV+C K    CGG           +  
Sbjct: 279 GMCGSCWAFSVTGNIEGQWFKKTGQLLSLSEQELVDCDKLDQACGGGLPSNAYEAIENLG 338

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GLE+E DY Y    G K  C +   KV  +           + +   L + GP+S  LN+
Sbjct: 339 GLETETDYSY---TGHKQSCDFSTGKVAAYINSSVELPKDEKEIAAFLAENGPVSAALNA 395

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
             + FY           C+P+ + HAVLLVG+G+++ +P+W  +NSWG    ++G++ + 
Sbjct: 396 FAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGFGQRNGVPFWAIKNSWGEDYGEQGYYYLY 455

Query: 575 RGNNACGIEQIAGYATID 592
           RG+  CGI ++   A ++
Sbjct: 456 RGSGLCGIHKMCSSAIVN 473



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 156/320 (48%), Gaps = 33/320 (10%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +L  FK F++   R Y++ EE ++R   F+Q+                YG ++FSD + +
Sbjct: 171 LLTMFKNFMITYNRTYSSQEEAEKRLRIFQQNMKTAQTLQSLEQGSAEYGITKFSDLTED 230

Query: 705 EI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
           E     L     +WS +            ++M   +    P PD WDWR      P  +Q
Sbjct: 231 EFRMMYLNPMLSQWSLK------------KEMKPAIPASAPAPDTWDWRDHGAVSPVKNQ 278

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---TH 817
             CGSCWAFS+ G +EGQ+  KTG+L+  S+ +LV+C K    C G    PS  Y    +
Sbjct: 279 GMCGSCWAFSVTGNIEGQWFKKTGQLLSLSEQELVDCDKLDQACGGGL--PSNAYEAIEN 336

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             GLE+E DY Y    G K  C +   KV  +           + +   L + GP+S  L
Sbjct: 337 LGGLETETDYSY---TGHKQSCDFSTGKVAAYINSSVELPKDEKEIAAFLAENGPVSAAL 393

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           N+  +  Y           C+P+ + HAVLLVG+G+++ +P+W ++NSWG    ++G++ 
Sbjct: 394 NAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGFGQRNGVPFWAIKNSWGEDYGEQGYYY 453

Query: 938 IERGNNACGIEQIAGYATID 957
           + RG+  CGI ++   A ++
Sbjct: 454 LYRGSGLCGIHKMCSSAIVN 473



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 8/217 (3%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           D WDWR      P  +Q  CGSCWAFS+ G +EGQ+  KTG+L+  S+ +LV+C K    
Sbjct: 262 DTWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIEGQWFKKTGQLLSLSEQELVDCDKLDQA 321

Query: 73  CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           C G    PS  Y    +  GLE+E DY Y    G K  C +   KV  +           
Sbjct: 322 CGGGL--PSNAYEAIENLGGLETETDYSY---TGHKQSCDFSTGKVAAYINSSVELPKDE 376

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           + +   L + GP+S  LN+  +  Y           C+P+ + HAVLLVG+G+++ +P+W
Sbjct: 377 KEIAAFLAENGPVSAALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGFGQRNGVPFW 436

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            ++NSWG    ++G++ + RG+  CGI ++   A ++
Sbjct: 437 AIKNSWGEDYGEQGYYYLYRGSGLCGIHKMCSSAIVN 473



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVLLVG+G+++ +P+W ++NSWG    ++G++ + RG+  CGI ++   A +
Sbjct: 413  CNPWMIDHAVLLVGFGQRNGVPFWAIKNSWGEDYGEQGYYYLYRGSGLCGIHKMCSSAIV 472

Query: 1025 D 1025
            +
Sbjct: 473  N 473


>gi|118429521|gb|ABK91808.1| cysteine proteinase prozyme precursor [Clonorchis sinensis]
          Length = 316

 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 164/326 (50%), Gaps = 22/326 (6%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 325
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 3   FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 61

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 62  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 112

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
              GP  DQ  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C +   GC G    +
Sbjct: 113 GAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDEVDEGCNGGTPQQ 172

Query: 446 QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKY 505
              +     GL+ + DYPY    G + +C    SKVK++     +     +   ++L + 
Sbjct: 173 AFKQILGMGGLQLDSDYPYE---GREGQCRMVPSKVKVYINGSKILPEDEQIQAQMLKET 229

Query: 506 GPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           GPLS  LN+  + FY    +      C    L HAVL VGYGK+  +PYW  +NSW  + 
Sbjct: 230 GPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMF 289

Query: 566 PDEGFFKIERGNNACGIEQIAGYATI 591
            + G+F+I RG+  CGI  +   + I
Sbjct: 290 GENGYFRIYRGDGTCGINTLVSTSII 315



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 166/326 (50%), Gaps = 23/326 (7%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 691
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 3   FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 61

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 62  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 112

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
              GP  DQ  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C +   GC+G   + 
Sbjct: 113 GAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDEVDEGCNGGTPQQ 172

Query: 812 SI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKY 870
           +  +     GL+ + DYPY+   G+   C    SKVK++     +     +   ++L + 
Sbjct: 173 AFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVKVYINGSKILPEDEQIQAQMLKET 229

Query: 871 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           GPLS  LN+  +  Y    +      C    L HAVL VGYGK+  +PYW V+NSW  + 
Sbjct: 230 GPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMF 289

Query: 931 PDEGFFKIERGNNACGIEQIAGYATI 956
            + G+F+I RG+  CGI  +   + I
Sbjct: 290 GENGYFRIYRGDGTCGINTLVSTSII 315



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 118/225 (52%), Gaps = 12/225 (5%)

Query: 10  PVP--------DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           PVP        D +DWR     GP  DQ DCGSCWAFS  G +EGQ+  KT  L++ S+ 
Sbjct: 94  PVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQ 153

Query: 62  QLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           QL++C +   GC+G   + +  +     GL+ + DYPY+   G+   C    SKVK++  
Sbjct: 154 QLLDCDEVDEGCNGGTPQQAFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVKVYIN 210

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
              +     +   ++L + GPLS  LN+  +  Y    +      C    L HAVL VGY
Sbjct: 211 GSKILPEDEQIQAQMLKETGPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGY 270

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 271 GKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 315



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L HAVL VGYGK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 256  CDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 315


>gi|113195461|ref|YP_717598.1| V-CATH [Clanis bilineata nucleopolyhedrosis virus]
 gi|66968272|gb|AAY59557.1| V-CATH [Clanis bilineata nucleopolyhedrosis virus]
          Length = 325

 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 157/316 (49%), Gaps = 30/316 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEILCK 709
           F++F+    + Y + +E   R++ FK +  +         H  +  ++FSD S  EI+ K
Sbjct: 27  FESFVANYNKMYNDTQEKAYRYKIFKHNLEEINIKNQVEDHAVFSINKFSDMSKSEIISK 86

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSC 766
                    Y  +       E     +  DGP    P  +DWR+ N   P   Q  CGSC
Sbjct: 87  ---------YTGLSLPSLMQENFCRAIILDGPPNKAPINFDWRQYNAVTPVRVQGNCGSC 137

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG--LESE 824
           WAFS    +E QY+IK  K +  S  QLV+C     GC G     ++E    AG  +  E
Sbjct: 138 WAFSTLAGIESQYSIKYNKQISLSVQQLVDCDTSNMGCAGGLLHTALEQIINAGGGVLQE 197

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           +DYPYK  + ++    ++   V++     ++  N  E +K +L   GP+ V +++  I D
Sbjct: 198 EDYPYKGVD-KQCNLPHNNFAVQVLGCYRYIVMN-EEKLKDVLRAVGPIPVAIDAASIVD 255

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y+   IR    TC+ Y L HAVLLVGYG QD +PYW ++N+WG    + G+F++ +  N+
Sbjct: 256 YSRGIIR----TCTYYGLNHAVLLVGYGVQDGVPYWTLKNTWGDDWGEHGYFRVRQNVNS 311

Query: 945 CGIEQIAGYATIDVVK 960
           CGI  I   A+  V+K
Sbjct: 312 CGI--INDLASTAVIK 325



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 153/315 (48%), Gaps = 32/315 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEILCK 343
           F++F+    + Y + +E   R++ FK +  +         H  +  ++FSD S  EI+ K
Sbjct: 27  FESFVANYNKMYNDTQEKAYRYKIFKHNLEEINIKNQVEDHAVFSINKFSDMSKSEIISK 86

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSC 400
                    Y  +       E     +  DGP    P  +DWR+ N   P   Q  CGSC
Sbjct: 87  ---------YTGLSLPSLMQENFCRAIILDGPPNKAPINFDWRQYNAVTPVRVQGNCGSC 137

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG---CDGLEQPIEYTHQAGLE 457
           WAFS    +E QY+IK  K +  S  QLV+C     GC G      LEQ I      G+ 
Sbjct: 138 WAFSTLAGIESQYSIKYNKQISLSVQQLVDCDTSNMGCAGGLLHTALEQIIN--AGGGVL 195

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
            E+DYPY+ G  ++    ++   V++     ++  N  E +K +L   GP+ V +++  I
Sbjct: 196 QEEDYPYK-GVDKQCNLPHNNFAVQVLGCYRYIVMN-EEKLKDVLRAVGPIPVAIDAASI 253

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
             Y+   IR    TC+ Y L HAVLLVGYG QD +PYW  +N+WG    + G+F++ +  
Sbjct: 254 VDYSRGIIR----TCTYYGLNHAVLLVGYGVQDGVPYWTLKNTWGDDWGEHGYFRVRQNV 309

Query: 578 NACG-IEQIAGYATI 591
           N+CG I  +A  A I
Sbjct: 310 NSCGIINDLASTAVI 324



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 123/224 (54%), Gaps = 12/224 (5%)

Query: 8   DGP---VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           DGP    P  +DWR+ N   P   Q +CGSCWAFS    +E QY+IK  K +  S  QLV
Sbjct: 107 DGPPNKAPINFDWRQYNAVTPVRVQGNCGSCWAFSTLAGIESQYSIKYNKQISLSVQQLV 166

Query: 65  ECAKQCSGCDGCFFEPSIEYTHQAG--LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           +C     GC G     ++E    AG  +  E+DYPYK  + ++    ++   V++     
Sbjct: 167 DCDTSNMGCAGGLLHTALEQIINAGGGVLQEEDYPYKGVD-KQCNLPHNNFAVQVLGCYR 225

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           ++  N  E +K +L   GP+ V +++  I DY+   IR    TC+ Y L HAVLLVGYG 
Sbjct: 226 YIVMN-EEKLKDVLRAVGPIPVAIDAASIVDYSRGIIR----TCTYYGLNHAVLLVGYGV 280

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
           QD +PYW ++N+WG    + G+F++ +  N+CG I  +A  A I
Sbjct: 281 QDGVPYWTLKNTWGDDWGEHGYFRVRQNVNSCGIINDLASTAVI 324



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 963  ETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGY 1021
             TC+ Y L HAVLLVGYG QD +PYW ++N+WG    + G+F++ +  N+CG I  +A  
Sbjct: 262  RTCTYYGLNHAVLLVGYGVQDGVPYWTLKNTWGDDWGEHGYFRVRQNVNSCGIINDLAST 321

Query: 1022 ATI 1024
            A I
Sbjct: 322  AVI 324


>gi|6649593|gb|AAF21470.1|U85983_1 cysteine proteinase [Clonorchis sinensis]
          Length = 259

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/269 (39%), Positives = 136/269 (50%), Gaps = 21/269 (7%)

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
            YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+ 
Sbjct: 7   HYGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREH 57

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
              GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     GCDG +  P
Sbjct: 58  GAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDDGCDGGY--P 115

Query: 812 SIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKIL 867
              YT      GLE   DYPY    G    C  DKSK V    G   L  +     +K L
Sbjct: 116 PQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQK-L 171

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927
              GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+V+NSWG
Sbjct: 172 RAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWG 229

Query: 928 PIGPDEGFFKIERGNNACGIEQIAGYATI 956
               +EG+F+I RG+  CGI  I   A I
Sbjct: 230 EDFGEEGYFRIYRGDGTCGINSIVTTAII 258



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 131/269 (48%), Gaps = 20/269 (7%)

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
            YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+ 
Sbjct: 7   HYGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREH 57

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
              GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C        GCDG  
Sbjct: 58  GAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDD---GCDGGY 114

Query: 446 QPIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKIL 502
            P  YT      GLE   DYPY    G    C  DKSK   +     +     +   + L
Sbjct: 115 PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSEKVQAQKL 171

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWG 562
              GPLS  LN+  +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+ +NSWG
Sbjct: 172 RAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWG 229

Query: 563 PIGPDEGFFKIERGNNACGIEQIAGYATI 591
               +EG+F+I RG+  CGI  I   A I
Sbjct: 230 EDFGEEGYFRIYRGDGTCGINSIVTTAII 258



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/217 (42%), Positives = 117/217 (53%), Gaps = 12/217 (5%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     G
Sbjct: 50  EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDDG 109

Query: 73  CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNG 128
           CDG +  P   YT      GLE   DYPY    G    C  DKSK V    G   L  + 
Sbjct: 110 CDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYVNGSTILPLSE 164

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
               +K L   GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PY
Sbjct: 165 KVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPY 221

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 222 WIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 258



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + HAVL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 199  CDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 258


>gi|332374900|gb|AEE62591.1| unknown [Dendroctonus ponderosae]
          Length = 359

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 158/323 (48%), Gaps = 47/323 (14%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSP 703
           ETF  F  K G+ Y ND E+  R E FK++  K  E              G ++FSD + 
Sbjct: 22  ETFVTFQQKYGKVYQNDSELSVREEIFKENLAKIEEHNKQFQQNLVSYELGLNQFSDLTE 81

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP------VPDAWDWRKKNVTGPA 757
            E             ++ ++      +++  ++EK          P + +W +K V  P 
Sbjct: 82  AE-------------FQALLTMSPLTDQLTKQMEKYNSEFDIKTAPVSVNWAEKGVVTPV 128

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH 817
            +Q  CGSCW F+  G +E + A+KTG LV  S+ QL++C +  +GCDG     +++Y  
Sbjct: 129 KNQGNCGSCWTFTTTGTIESRLALKTGSLVSLSEQQLLDCNRVNAGCDGGVLSYALQYVE 188

Query: 818 QAGLESEKDYPYKNANG-----EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGP 872
            AGL +E +YPYK  NG      K   AY K    ++T  +      S+ MK +    GP
Sbjct: 189 SAGLTTEDEYPYKAWNGTCNSTHKPVAAYTKGYTLIYTRSE------SDLMKAV--AEGP 240

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           ++V LN+DL+  Y+      N   CS   + H  L+VGY +   +PYW+++NSWG    +
Sbjct: 241 VAVALNADLLQYYSKGIF--NPSACSS-TVNHGGLVVGYEENATLPYWIIKNSWGATWGE 297

Query: 933 EGFFKIERGNNACGIEQIAGYAT 955
            G+F++ +G N CGI     Y T
Sbjct: 298 NGYFRMAKGYNLCGITSQPIYPT 320



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 152/319 (47%), Gaps = 38/319 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSP 337
           ETF  F  K G+ Y ND E+  R E FK++  K  E              G ++FSD + 
Sbjct: 22  ETFVTFQQKYGKVYQNDSELSVREEIFKENLAKIEEHNKQFQQNLVSYELGLNQFSDLTE 81

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP------VPDAWDWRKKNVTGPA 391
            E             ++ ++      +++  ++EK          P + +W +K V  P 
Sbjct: 82  AE-------------FQALLTMSPLTDQLTKQMEKYNSEFDIKTAPVSVNWAEKGVVTPV 128

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT 451
            +Q  CGSCW F+  G +E + A+KTG LV  S+ QL++C +  +GC G   L   ++Y 
Sbjct: 129 KNQGNCGSCWTFTTTGTIESRLALKTGSLVSLSEQQLLDCNRVNAGCDG-GVLSYALQYV 187

Query: 452 HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVG 511
             AGL +E +YPY+  NG    C      V  +T    L +  SE+        GP++V 
Sbjct: 188 ESAGLTTEDEYPYKAWNG---TCNSTHKPVAAYTKGYTLIYTRSESDLMKAVAEGPVAVA 244

Query: 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           LN+ L+ +Y+      N   CS   + H  L+VGY +   +PYW+ +NSWG    + G+F
Sbjct: 245 LNADLLQYYSKGIF--NPSACSS-TVNHGGLVVGYEENATLPYWIIKNSWGATWGENGYF 301

Query: 572 KIERGNNACGIEQIAGYAT 590
           ++ +G N CGI     Y T
Sbjct: 302 RMAKGYNLCGITSQPIYPT 320



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 120/218 (55%), Gaps = 16/218 (7%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P + +W +K V  P  +Q +CGSCW F+  G +E + A+KTG LV  S+ QL++C +  +
Sbjct: 114 PVSVNWAEKGVVTPVKNQGNCGSCWTFTTTGTIESRLALKTGSLVSLSEQQLLDCNRVNA 173

Query: 72  GCDGCFFEPSIEYTHQAGLESEKDYPYKNANG-----EKFKCAYDKSKVKLFTGKDFLHF 126
           GCDG     +++Y   AGL +E +YPYK  NG      K   AY K    ++T  +    
Sbjct: 174 GCDGGVLSYALQYVESAGLTTEDEYPYKAWNGTCNSTHKPVAAYTKGYTLIYTRSE---- 229

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
             S+ MK +    GP++V LN+DL+  Y+      N   CS   + H  L+VGY +   +
Sbjct: 230 --SDLMKAV--AEGPVAVALNADLLQYYSKGIF--NPSACSS-TVNHGGLVVGYEENATL 282

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           PYW+++NSWG    + G+F++ +G N CGI     Y T
Sbjct: 283 PYWIIKNSWGATWGENGYFRMAKGYNLCGITSQPIYPT 320



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            + N   CS   + H  L+VGY +   +PYW+++NSWG    + G+F++ +G N CGI   
Sbjct: 257  IFNPSACSS-TVNHGGLVVGYEENATLPYWIIKNSWGATWGENGYFRMAKGYNLCGITSQ 315

Query: 1019 AGYAT 1023
              Y T
Sbjct: 316  PIYPT 320


>gi|55979119|gb|AAV69023.1| cysteine protease [Opisthorchis viverrini]
 gi|224923980|gb|ACN68966.1| cathepsin F-like cysteine protease [Opisthorchis viverrini]
          Length = 326

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 159/328 (48%), Gaps = 44/328 (13%)

Query: 283 FDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFS 333
           F+ ++    ++ F +K  + Y+ND++ + RF  FK +  +             YG ++FS
Sbjct: 23  FEPDDARALYEEFKLKYKKTYSNDDD-ELRFRIFKDNLERAKRLQAMEQGTAEYGVTQFS 81

Query: 334 DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 393
           D + EE   +         Y R+  D   V +     E        +DWR     GP  D
Sbjct: 82  DLTSEEFKTR---------YLRMRFDEPIVNEDPTPQEDVTMDNSNFDWRDHGAVGPVLD 132

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT-- 451
           Q  CGSCWAFS+ G +EGQ+  KTG L+  S+ QL++C        GCDG   P  Y+  
Sbjct: 133 QGDCGSCWAFSVIGNVEGQWFRKTGDLLGLSEQQLIDCDHSDQ---GCDGGYPPQTYSAI 189

Query: 452 -HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS-------ETMKKILY 503
               GLE   DYPY   +G    C  D+SK          Y NGS       +T  K L 
Sbjct: 190 EEMGGLELRSDYPYTGKDG---ICYMDQSKF-------VAYVNGSTRLPWCEKTQAKSLK 239

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
           + GPLS GLN+ L+  Y    +R     C+P +L HAVL VGYG +  +PYW+ +NSWG 
Sbjct: 240 EIGPLSSGLNAVLLQLYKRGIMRP--RWCNPAELNHAVLTVGYGMEHRMPYWIVKNSWGK 297

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              ++G+F+I RG+  CGI +    A +
Sbjct: 298 RFGEKGYFRIYRGDGTCGINRAVTTAVV 325



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/320 (33%), Positives = 157/320 (49%), Gaps = 29/320 (9%)

Query: 649 FDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFS 699
           F+ ++    ++ F +K  + Y+ND++ + RF  FK +  +             YG ++FS
Sbjct: 23  FEPDDARALYEEFKLKYKKTYSNDDD-ELRFRIFKDNLERAKRLQAMEQGTAEYGVTQFS 81

Query: 700 DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 759
           D + EE   +         Y R+  D   V +     E        +DWR     GP  D
Sbjct: 82  DLTSEEFKTR---------YLRMRFDEPIVNEDPTPQEDVTMDNSNFDWRDHGAVGPVLD 132

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT--- 816
           Q  CGSCWAFS+ G +EGQ+  KTG L+  S+ QL++C     GCDG +  P   Y+   
Sbjct: 133 QGDCGSCWAFSVIGNVEGQWFRKTGDLLGLSEQQLIDCDHSDQGCDGGY--PPQTYSAIE 190

Query: 817 HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVL 876
              GLE   DYPY   +G    C  D+SK   +           +T  K L + GPLS  
Sbjct: 191 EMGGLELRSDYPYTGKDG---ICYMDQSKFVAYVNGSTRLPWCEKTQAKSLKEIGPLSSG 247

Query: 877 LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFF 936
           LN+ L+  Y    +R     C+P +L HAVL VGYG +  +PYW+V+NSWG    ++G+F
Sbjct: 248 LNAVLLQLYKRGIMRP--RWCNPAELNHAVLTVGYGMEHRMPYWIVKNSWGKRFGEKGYF 305

Query: 937 KIERGNNACGIEQIAGYATI 956
           +I RG+  CGI +    A +
Sbjct: 306 RIYRGDGTCGINRAVTTAVV 325



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 117/214 (54%), Gaps = 10/214 (4%)

Query: 15  WDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 74
           +DWR     GP  DQ DCGSCWAFS+ G +EGQ+  KTG L+  S+ QL++C     GCD
Sbjct: 119 FDWRDHGAVGPVLDQGDCGSCWAFSVIGNVEGQWFRKTGDLLGLSEQQLIDCDHSDQGCD 178

Query: 75  GCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           G +  P   Y+      GLE   DYPY   +G    C  D+SK   +           +T
Sbjct: 179 GGY--PPQTYSAIEEMGGLELRSDYPYTGKDG---ICYMDQSKFVAYVNGSTRLPWCEKT 233

Query: 132 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 191
             K L + GPLS  LN+ L+  Y    +R     C+P +L HAVL VGYG +  +PYW+V
Sbjct: 234 QAKSLKEIGPLSSGLNAVLLQLYKRGIMRP--RWCNPAELNHAVLTVGYGMEHRMPYWIV 291

Query: 192 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +NSWG    ++G+F+I RG+  CGI +    A +
Sbjct: 292 KNSWGKRFGEKGYFRIYRGDGTCGINRAVTTAVV 325


>gi|355566270|gb|EHH22649.1| Cathepsin F [Macaca mulatta]
          Length = 484

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 146/314 (46%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 183 MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 242

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +   E   KM          P  WDWR K       DQ  CG
Sbjct: 243 EF---------RTIYLNPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 293

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+
Sbjct: 294 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLET 353

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY YR   G    C +   K K++           + +   L K GP+SV +N+  + 
Sbjct: 354 EDDYSYR---GHMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGMQ 410

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY     R     CSP+ + HAVLLVGYG + DIP+W  +NSWG    ++G++ + RG+ 
Sbjct: 411 FYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHRGSG 470

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A +D
Sbjct: 471 ACGVNTMASSAVVD 484



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 150/316 (47%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 183 MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 242

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +   E   KM          P  WDWR K       DQ  CG
Sbjct: 243 EF---------RTIYLNPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 293

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  GL
Sbjct: 294 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGL 351

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y+   G    C +   K K++           + +   L K GP+SV +N+  
Sbjct: 352 ETEDDYSYR---GHMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFG 408

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y     R     CSP+ + HAVLLVGYG + +IP+W ++NSWG    ++G++ + RG
Sbjct: 409 MQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHRG 468

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A +D
Sbjct: 469 SGACGVNTMASSAVVD 484



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 330

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 331 KACMGGL--PSNAYSAIKNLGGLETEDDYSYR---GHMQACNFSAEKAKVYINDSVELSQ 385

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + +IP
Sbjct: 386 NEQKLAAWLAKKGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIP 445

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 446 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 484



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + DIP+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 424  CSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 483

Query: 1025 D 1025
            D
Sbjct: 484  D 484


>gi|6042196|ref|NP_003784.2| cathepsin F precursor [Homo sapiens]
 gi|12643325|sp|Q9UBX1.1|CATF_HUMAN RecName: Full=Cathepsin F; Short=CATSF; Flags: Precursor
 gi|4731642|gb|AAD26616.2|AF088886_1 cathepsin F precursor [Homo sapiens]
 gi|5305722|gb|AAD41790.1|AF132894_1 cathepsin F [Homo sapiens]
 gi|4826528|emb|CAB42883.1| cysteine proteinase [Homo sapiens]
 gi|15079738|gb|AAH11682.1| Cathepsin F [Homo sapiens]
 gi|22209085|gb|AAH36451.1| Cathepsin F [Homo sapiens]
 gi|61363874|gb|AAX42458.1| cathepsin F [synthetic construct]
 gi|123993139|gb|ABM84171.1| cathepsin F [synthetic construct]
 gi|189053904|dbj|BAG36411.1| unnamed protein product [Homo sapiens]
          Length = 484

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 157/337 (46%), Gaps = 22/337 (6%)

Query: 266 DQVVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 324
           ++  + V +L  E  L+ D    +   FK F++   R Y + EE + R   F  +  +  
Sbjct: 160 NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ 219

Query: 325 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
           +         +YG ++FSD + EE             Y   +  +E   KM         
Sbjct: 220 KIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNTLLRKEPGNKMKQAKSVGDL 270

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 330

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
             C G           +  GLE+E DY Y+   G    C +   K K++           
Sbjct: 331 KACMGGLPSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNE 387

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           + +   L K GP+SV +N+  + FY     R     CSP+ + HAVLLVGYG + D+P+W
Sbjct: 388 QKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFW 447

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
             +NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 448 AIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 484



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 161/339 (47%), Gaps = 27/339 (7%)

Query: 632 DQVVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 690
           ++  + V +L  E  L+ D    +   FK F++   R Y + EE + R   F  +  +  
Sbjct: 160 NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ 219

Query: 691 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
           +         +YG ++FSD + EE             Y   +  +E   KM         
Sbjct: 220 KIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNTLLRKEPGNKMKQAKSVGDL 270

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 330

Query: 802 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 331 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 385

Query: 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 386 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 445

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 446 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 484



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 330

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 331 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 385

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 386 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 445

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 446 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 484



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 424  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 483

Query: 1025 D 1025
            D
Sbjct: 484  D 484


>gi|312985015|gb|ACX54787.2| cysteine protease [Arachis diogoi]
          Length = 360

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 159/327 (48%), Gaps = 47/327 (14%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 338
           N    F  F  K G+ YA  EE   RF  F+ +    K H +      +G ++FSD +PE
Sbjct: 39  NAEHHFTTFKTKFGKSYATQEEHDYRFGVFRANLRRAKLHAKLDPSAEHGVTKFSDLTPE 98

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E          +R Y  +   R         +     +P+ +DWR K    P  +Q +CG
Sbjct: 99  EF---------KRQYLGLKPLRLPSTANKAPILPTSDLPENFDWRDKGAVTPVKNQGSCG 149

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEY 450
           SCWAFS  G LEG + + TG+LV  S+ QLV+C   C       C  GC+G  +    +Y
Sbjct: 150 SCWAFSTTGALEGAHYLSTGELVSLSEQQLVDCDHVCDPEEYGACDAGCNGGLMNNAFDY 209

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
             QA G+++EKDYPY   +G    C +DKSKV        +     + +   L K+GPL+
Sbjct: 210 ILQAGGVQTEKDYPY---SGRDETCKFDKSKVAATVANFSVVSLDEDQIAANLVKHGPLA 266

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLAR 558
           VG+N+  +  Y G           PY    +L H VLLVGYG       +  D P+W+ +
Sbjct: 267 VGINAIFMQTYIGG-------VSCPYICGKNLDHGVLLVGYGAAGYAPIRFKDKPFWIIK 319

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQI 585
           NSWG    ++G++KI RG N CG++ +
Sbjct: 320 NSWGESWGEDGYYKICRGKNVCGVDSM 346



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 159/327 (48%), Gaps = 48/327 (14%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 704
           N    F  F  K G+ YA  EE   RF  F+ +    K H +      +G ++FSD +PE
Sbjct: 39  NAEHHFTTFKTKFGKSYATQEEHDYRFGVFRANLRRAKLHAKLDPSAEHGVTKFSDLTPE 98

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E          +R Y  +   R         +     +P+ +DWR K    P  +Q +CG
Sbjct: 99  EF---------KRQYLGLKPLRLPSTANKAPILPTSDLPENFDWRDKGAVTPVKNQGSCG 149

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCWAFS  G LEG + + TG+LV  S+ QLV+C   C         +GC+G     + +Y
Sbjct: 150 SCWAFSTTGALEGAHYLSTGELVSLSEQQLVDCDHVCDPEEYGACDAGCNGGLMNNAFDY 209

Query: 816 THQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
             QA G+++EKDYPY   +G    C +DKSKV        +     + +   L K+GPL+
Sbjct: 210 ILQAGGVQTEKDYPY---SGRDETCKFDKSKVAATVANFSVVSLDEDQIAANLVKHGPLA 266

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVR 923
           V +N+  +  Y G           PY    +L H VLLVGYG       +  + P+W+++
Sbjct: 267 VGINAIFMQTYIGG-------VSCPYICGKNLDHGVLLVGYGAAGYAPIRFKDKPFWIIK 319

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQI 950
           NSWG    ++G++KI RG N CG++ +
Sbjct: 320 NSWGESWGEDGYYKICRGKNVCGVDSM 346



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 123/230 (53%), Gaps = 31/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR K    P  +Q  CGSCWAFS  G LEG + + TG+LV  S+ QLV+C   C
Sbjct: 127 LPENFDWRDKGAVTPVKNQGSCGSCWAFSTTGALEGAHYLSTGELVSLSEQQLVDCDHVC 186

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC+G     + +Y  QA G+++EKDYPY   +G    C +DKSKV     
Sbjct: 187 DPEEYGACDAGCNGGLMNNAFDYILQAGGVQTEKDYPY---SGRDETCKFDKSKVAATVA 243

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K+GPL+V +N+  +  Y G           PY    +L H VL
Sbjct: 244 NFSVVSLDEDQIAANLVKHGPLAVGINAIFMQTYIGG-------VSCPYICGKNLDHGVL 296

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +  + P+W+++NSWG    ++G++KI RG N CG++ +
Sbjct: 297 LVGYGAAGYAPIRFKDKPFWIIKNSWGESWGEDGYYKICRGKNVCGVDSM 346



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  A GI  I     I  V     C   +L H VLLVGYG       +  D P+W++
Sbjct: 260  VKHGPLAVGINAIFMQTYIGGVSCPYICGK-NLDHGVLLVGYGAAGYAPIRFKDKPFWII 318

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    ++G++KI RG N CG++ +
Sbjct: 319  KNSWGESWGEDGYYKICRGKNVCGVDSM 346


>gi|18141287|gb|AAL60581.1|AF454959_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 368

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/343 (33%), Positives = 163/343 (47%), Gaps = 59/343 (17%)

Query: 653 NILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDR 701
           N+L +   F  F  K G+ YA+ EE   RF  FK +  +  +H+      R+G ++FSD 
Sbjct: 43  NVLSSEDHFSLFKKKFGKVYASREEHDYRFSVFKSNLRRARRHQKLDPSARHGVTQFSDL 102

Query: 702 SPEE-----ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
           +  E     +  K GFK        +  D  K   +  E      +P+ +DWR++    P
Sbjct: 103 TRSEFKRKHLGVKGGFK--------LPKDANKAPILPTE-----NLPEEFDWRERGAVTP 149

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGC 807
             +Q +CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G 
Sbjct: 150 VKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGG 209

Query: 808 FFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI 866
               + EYT +  GL  E+DYPY   +G    C  DKSK+        +     E +   
Sbjct: 210 LMNSAFEYTLKTGGLMREEDYPYTGKDGA--TCKLDKSKIVASVSNFSVISIDEEQIAAN 267

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------D 915
           L K GPL+V +N+  +  Y G           PY     L H VLLVGYG          
Sbjct: 268 LVKNGPLAVAINAAYMQTYIGG-------VSCPYICMRRLNHGVLLVGYGSAGYAPARFK 320

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
             PYW+++NSWG    ++GF+KI RG N CG++ +    T  V
Sbjct: 321 EKPYWIIKNSWGETWGEDGFYKICRGRNVCGVDSLVSTVTATV 363



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/343 (33%), Positives = 163/343 (47%), Gaps = 58/343 (16%)

Query: 287 NILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDR 335
           N+L +   F  F  K G+ YA+ EE   RF  FK +  +  +H+      R+G ++FSD 
Sbjct: 43  NVLSSEDHFSLFKKKFGKVYASREEHDYRFSVFKSNLRRARRHQKLDPSARHGVTQFSDL 102

Query: 336 SPEE-----ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
           +  E     +  K GFK        +  D  K   +  E      +P+ +DWR++    P
Sbjct: 103 TRSEFKRKHLGVKGGFK--------LPKDANKAPILPTE-----NLPEEFDWRERGAVTP 149

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG- 443
             +Q +CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G 
Sbjct: 150 VKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGG 209

Query: 444 -LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKI 501
            +    EYT +  GL  E+DYPY   +G    C  DKSK+        +     E +   
Sbjct: 210 LMNSAFEYTLKTGGLMREEDYPYTGKDGA--TCKLDKSKIVASVSNFSVISIDEEQIAAN 267

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------D 550
           L K GPL+V +N+  +  Y G           PY     L H VLLVGYG          
Sbjct: 268 LVKNGPLAVAINAAYMQTYIGG-------VSCPYICMRRLNHGVLLVGYGSAGYAPARFK 320

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 593
           + PYW+ +NSWG    ++GF+KI RG N CG++ +    T  V
Sbjct: 321 EKPYWIIKNSWGETWGEDGFYKICRGRNVCGVDSLVSTVTATV 363



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 119/238 (50%), Gaps = 30/238 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR++    P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 135 LPEEFDWRERGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +  GL  E+DYPY   +G    C  DKSK+     
Sbjct: 195 DPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGKDGA--TCKLDKSKIVASVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 253 NFSVISIDEEQIAANLVKNGPLAVAINAAYMQTYIGG-------VSCPYICMRRLNHGVL 305

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           LVGYG            PYW+++NSWG    ++GF+KI RG N CG++ +    T  V
Sbjct: 306 LVGYGSAGYAPARFKEKPYWIIKNSWGETWGEDGFYKICRGRNVCGVDSLVSTVTATV 363



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 7/64 (10%)

Query: 970  LGHAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 1022
            L H VLLVGYG          + PYW+++NSWG    ++GF+KI RG N CG++ +    
Sbjct: 300  LNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGETWGEDGFYKICRGRNVCGVDSLVSTV 359

Query: 1023 TIDV 1026
            T  V
Sbjct: 360  TATV 363


>gi|163914827|ref|NP_001106423.1| cathepsin F precursor [Xenopus (Silurana) tropicalis]
 gi|157423494|gb|AAI53364.1| LOC100127591 protein [Xenopus (Silurana) tropicalis]
          Length = 463

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 146/313 (46%), Gaps = 21/313 (6%)

Query: 289 LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH---------ERYGTSEFSDRSPEE 339
           L  FK F+    ++Y++ EE   R + F Q+  K             YG +++SD + +E
Sbjct: 163 LTLFKDFVTTYNKKYSDQEEAARRLQIFSQNLKKAQMIQEMDQGTAEYGVTKYSDLTEDE 222

Query: 340 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
                        Y   +   + + +M   +  +   PD WDWR         +Q  CGS
Sbjct: 223 F---------RSLYLNPLLSSKPLYQMKKAIVPNMSAPDQWDWRDHGAVTEVKNQGMCGS 273

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWAFS+ G +EGQ+ +K G LV  S+ +LV+C      C G              G+E+E
Sbjct: 274 CWAFSVIGNIEGQWFLKKGSLVSLSEQELVDCDGVDHACAGGLPSNAYEAIEKLGGIETE 333

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
           ++Y Y    G K  C++  SKV  +             +   L + GP+S+ LN+  + F
Sbjct: 334 QEYSYE---GHKNTCSFSTSKVSAYINSSVEIPKDENEIAAWLAQNGPISIALNAFAMQF 390

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
           Y           C+P+ + HAVLLVGYG+++  P+W  +NSWG    ++G++ + RG  A
Sbjct: 391 YRKGISHPFRILCNPWMIDHAVLLVGYGERNGTPFWAIKNSWGTDWGEQGYYYLYRGTGA 450

Query: 580 CGIEQIAGYATID 592
           CG+  +   A +D
Sbjct: 451 CGMNTMCSSAVVD 463



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 150/313 (47%), Gaps = 22/313 (7%)

Query: 655 LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH---------ERYGTSEFSDRSPEE 705
           L  FK F+    ++Y++ EE   R + F Q+  K             YG +++SD + +E
Sbjct: 163 LTLFKDFVTTYNKKYSDQEEAARRLQIFSQNLKKAQMIQEMDQGTAEYGVTKYSDLTEDE 222

Query: 706 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
                        Y   +   + + +M   +  +   PD WDWR         +Q  CGS
Sbjct: 223 F---------RSLYLNPLLSSKPLYQMKKAIVPNMSAPDQWDWRDHGAVTEVKNQGMCGS 273

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESE 824
           CWAFS+ G +EGQ+ +K G LV  S+ +LV+C      C G     + E   +  G+E+E
Sbjct: 274 CWAFSVIGNIEGQWFLKKGSLVSLSEQELVDCDGVDHACAGGLPSNAYEAIEKLGGIETE 333

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           ++Y Y+   G K  C++  SKV  +             +   L + GP+S+ LN+  +  
Sbjct: 334 QEYSYE---GHKNTCSFSTSKVSAYINSSVEIPKDENEIAAWLAQNGPISIALNAFAMQF 390

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y           C+P+ + HAVLLVGYG+++  P+W ++NSWG    ++G++ + RG  A
Sbjct: 391 YRKGISHPFRILCNPWMIDHAVLLVGYGERNGTPFWAIKNSWGTDWGEQGYYYLYRGTGA 450

Query: 945 CGIEQIAGYATID 957
           CG+  +   A +D
Sbjct: 451 CGMNTMCSSAVVD 463



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 114/217 (52%), Gaps = 4/217 (1%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD WDWR         +Q  CGSCWAFS+ G +EGQ+ +K G LV  S+ +LV+C    
Sbjct: 250 APDQWDWRDHGAVTEVKNQGMCGSCWAFSVIGNIEGQWFLKKGSLVSLSEQELVDCDGVD 309

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
             C G     + E   +  G+E+E++Y Y+   G K  C++  SKV  +           
Sbjct: 310 HACAGGLPSNAYEAIEKLGGIETEQEYSYE---GHKNTCSFSTSKVSAYINSSVEIPKDE 366

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
             +   L + GP+S+ LN+  +  Y           C+P+ + HAVLLVGYG+++  P+W
Sbjct: 367 NEIAAWLAQNGPISIALNAFAMQFYRKGISHPFRILCNPWMIDHAVLLVGYGERNGTPFW 426

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            ++NSWG    ++G++ + RG  ACG+  +   A +D
Sbjct: 427 AIKNSWGTDWGEQGYYYLYRGTGACGMNTMCSSAVVD 463



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 42/61 (68%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVLLVGYG+++  P+W ++NSWG    ++G++ + RG  ACG+  +   A +
Sbjct: 403  CNPWMIDHAVLLVGYGERNGTPFWAIKNSWGTDWGEQGYYYLYRGTGACGMNTMCSSAVV 462

Query: 1025 D 1025
            D
Sbjct: 463  D 463


>gi|426369382|ref|XP_004051670.1| PREDICTED: cathepsin F [Gorilla gorilla gorilla]
          Length = 517

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 174/383 (45%), Gaps = 29/383 (7%)

Query: 226 DVVIQRLVLEKKAIMLIQAVFLLCGVASCL---CLPSLTDRITD---QVVARVDTLAIEG 279
           D ++ RL + KK ++    V +  G    L   C P  T ++ D   +  + V +L  E 
Sbjct: 148 DPMVCRLPVSKKTLLCSFEVLIELGRHVLLRRDCGPVDT-KVPDNRNETFSSVISLLNED 206

Query: 280 SLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGT 329
            L  D    +   FK F++   R Y + EE + R   F  +  +  +         +YG 
Sbjct: 207 PLPQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGV 266

Query: 330 SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 389
           ++FSD + EE             Y   +   E   KM          P  WDWR K    
Sbjct: 267 TKFSDLTEEEF---------RTIYLNSLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVT 317

Query: 390 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIE 449
              DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G         
Sbjct: 318 KVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSA 377

Query: 450 YTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
             +  GLE+E DY Y+   G    C +   K K++           + +   L K GP+S
Sbjct: 378 IKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPIS 434

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEG 569
           V +N+  + FY     R     CSP+ + HAVLLVGYG + D+P+W  +NSWG    ++G
Sbjct: 435 VAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKG 494

Query: 570 FFKIERGNNACGIEQIAGYATID 592
           ++ + RG+ ACG+  +A  A +D
Sbjct: 495 YYYLHRGSGACGVNTMASSAVVD 517



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 178/385 (46%), Gaps = 34/385 (8%)

Query: 592 DVVIQRLVLEKKAIMLIQAVFLLCGVASCL---CLPSLTDRITD---QVVARVDTLAIEG 645
           D ++ RL + KK ++    V +  G    L   C P  T ++ D   +  + V +L  E 
Sbjct: 148 DPMVCRLPVSKKTLLCSFEVLIELGRHVLLRRDCGPVDT-KVPDNRNETFSSVISLLNED 206

Query: 646 SLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGT 695
            L  D    +   FK F++   R Y + EE + R   F  +  +  +         +YG 
Sbjct: 207 PLPQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGV 266

Query: 696 SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 755
           ++FSD + EE             Y   +   E   KM          P  WDWR K    
Sbjct: 267 TKFSDLTEEEF---------RTIYLNSLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVT 317

Query: 756 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY 815
              DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y
Sbjct: 318 KVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAY 375

Query: 816 T---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGP 872
           +   +  GLE+E DY Y+   G    C +   K K++           + +   L K GP
Sbjct: 376 SAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGP 432

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P+W ++NSWG    +
Sbjct: 433 ISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGE 492

Query: 933 EGFFKIERGNNACGIEQIAGYATID 957
           +G++ + RG+ ACG+  +A  A +D
Sbjct: 493 KGYYYLHRGSGACGVNTMASSAVVD 517



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 304 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 363

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 364 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 418

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 419 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 478

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 479 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 517



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 457  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 516

Query: 1025 D 1025
            D
Sbjct: 517  D 517


>gi|116242322|gb|ABJ89818.1| cysteine proteinase 3 [Clonorchis sinensis]
          Length = 327

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 163/326 (50%), Gaps = 22/326 (6%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 325
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
              GP  DQ  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C     GC G    +
Sbjct: 124 GAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDGVDEGCNGGTPQQ 183

Query: 446 QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKY 505
              +     GL+ + DYPY    G + +C    SKVK++     +     +   ++L + 
Sbjct: 184 AFKQILGMGGLQLDSDYPYE---GREGQCRMVPSKVKVYINGSKILPEDEQIQAQMLKET 240

Query: 506 GPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           GPLS  LN+  + FY    +      C    L HAVL VGYGK+  +PYW  +NSW  + 
Sbjct: 241 GPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMF 300

Query: 566 PDEGFFKIERGNNACGIEQIAGYATI 591
            + G+F+I RG+  CGI  +   + I
Sbjct: 301 GENGYFRIYRGDGTCGINTLVSTSII 326



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 165/326 (50%), Gaps = 23/326 (7%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 691
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
              GP  DQ  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C     GC+G   + 
Sbjct: 124 GAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDGVDEGCNGGTPQQ 183

Query: 812 SI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKY 870
           +  +     GL+ + DYPY+   G+   C    SKVK++     +     +   ++L + 
Sbjct: 184 AFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVKVYINGSKILPEDEQIQAQMLKET 240

Query: 871 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           GPLS  LN+  +  Y    +      C    L HAVL VGYGK+  +PYW V+NSW  + 
Sbjct: 241 GPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMF 300

Query: 931 PDEGFFKIERGNNACGIEQIAGYATI 956
            + G+F+I RG+  CGI  +   + I
Sbjct: 301 GENGYFRIYRGDGTCGINTLVSTSII 326



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 12/225 (5%)

Query: 10  PVP--------DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           PVP        D +DWR     GP  DQ DCGSCWAFS  G +EGQ+  KT  L++ S+ 
Sbjct: 105 PVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQ 164

Query: 62  QLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           QL++C     GC+G   + +  +     GL+ + DYPY+   G+   C    SKVK++  
Sbjct: 165 QLLDCDGVDEGCNGGTPQQAFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVKVYIN 221

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
              +     +   ++L + GPLS  LN+  +  Y    +      C    L HAVL VGY
Sbjct: 222 GSKILPEDEQIQAQMLKETGPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGY 281

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 282 GKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 326



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L HAVL VGYGK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 267  CDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 326


>gi|340053963|emb|CCC48256.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 452

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 155/312 (49%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 709
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ +CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGSCGSCWSF 146

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKD 826
           S  G +EGQ+A     L   S+  LV C  + +GC G F + + E+    +   + +EK 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDSKDNGCGGGFMDNAFEWIVKENSGKVYTEKS 206

Query: 827 YPYKNANGEKFKCAYDKSKV-KLFTGK-DFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           YPY +  GE+  C     +V    TG  D  H    + + K L   GP++V +++     
Sbjct: 207 YPYVSGGGEEPPCKPRGHEVGATITGHVDIPH--DEDAIAKYLADNGPVAVAVDATTFMS 264

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y+G  +     +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N 
Sbjct: 265 YSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQ 320

Query: 945 CGIEQIAGYATI 956
           C + Q+A  A +
Sbjct: 321 CLVAQLASSAVV 332



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 151/310 (48%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 343
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ +CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGSCGSCWSF 146

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKD 461
           S  G +EGQ+A     L   S+  LV C  + +GCGG   D   + I   +   + +EK 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDSKDNGCGGGFMDNAFEWIVKENSGKVYTEKS 206

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           YPY +G GE+  C     +V           +  + + K L   GP++V +++     Y+
Sbjct: 207 YPYVSGGGEEPPCKPRGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATTFMSYS 266

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
           G  +     +C+   L H VLLVGY      PYW+ +NSW     ++G+ +IE+G N C 
Sbjct: 267 GGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCL 322

Query: 582 IEQIAGYATI 591
           + Q+A  A +
Sbjct: 323 VAQLASSAVV 332



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCW+FS  G +EGQ+A     L   S+  LV C  
Sbjct: 117 GKAPAAVDWRRKGAVTPVKDQGSCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDS 176

Query: 69  QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK-DF 123
           + +GC G F + + E+    +   + +EK YPY +  GE+  C     +V    TG  D 
Sbjct: 177 KDNGCGGGFMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPRGHEVGATITGHVDI 236

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            H    + + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY   
Sbjct: 237 PH--DEDAIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDS 290

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
              PYW+++NSW     ++G+ +IE+G N C + Q+A  A +
Sbjct: 291 SKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAVV 332



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N C + Q+A  A 
Sbjct: 272  SCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAV 331

Query: 1024 I 1024
            +
Sbjct: 332  V 332


>gi|358339045|dbj|GAA32724.2| cathepsin F, partial [Clonorchis sinensis]
          Length = 271

 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 138/275 (50%), Gaps = 12/275 (4%)

Query: 318 QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
           Q+  +   +YG ++FSD + EE   +         Y R+  D   V + L   E      
Sbjct: 9   QEMEQGTAQYGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDN 59

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
           + +DWR+    GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     G
Sbjct: 60  EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLDKG 119

Query: 438 CGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET 497
           C G    +   E     GLE   DYPY   +G    C  ++SK   +     +     + 
Sbjct: 120 CNGGYPPKTYGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNDSTVLPLSEKI 176

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLA 557
             + L + GPLS  LN+ L+ FY G  I      C+P+ L HAVL VGYG +  IPYW+ 
Sbjct: 177 QAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIV 236

Query: 558 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           +NSWG    ++G+F+I RG   CGI  +   A ID
Sbjct: 237 KNSWGVGFGEKGYFRIFRGAGTCGINLVVSTAIID 271



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 140/275 (50%), Gaps = 13/275 (4%)

Query: 684 QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
           Q+  +   +YG ++FSD + EE   +         Y R+  D   V + L   E      
Sbjct: 9   QEMEQGTAQYGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDN 59

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
           + +DWR+    GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     G
Sbjct: 60  EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLDKG 119

Query: 804 CDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 862
           C+G +   +  E     GLE   DYPY   +G    C  ++SK   +     +     + 
Sbjct: 120 CNGGYPPKTYGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNDSTVLPLSEKI 176

Query: 863 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 922
             + L + GPLS  LN+ L+  Y G  I      C+P+ L HAVL VGYG +  IPYW+V
Sbjct: 177 QAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIV 236

Query: 923 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           +NSWG    ++G+F+I RG   CGI  +   A ID
Sbjct: 237 KNSWGVGFGEKGYFRIFRGAGTCGINLVVSTAIID 271



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 117/215 (54%), Gaps = 4/215 (1%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G +EGQ+  KTG L+  S+ QLV+C     G
Sbjct: 60  EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDHLDKG 119

Query: 73  CDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           C+G +   +  E     GLE   DYPY   +G    C  ++SK   +     +     + 
Sbjct: 120 CNGGYPPKTYGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVAYVNDSTVLPLSEKI 176

Query: 132 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 191
             + L + GPLS  LN+ L+  Y G  I      C+P+ L HAVL VGYG +  IPYW+V
Sbjct: 177 QAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGIPYWIV 236

Query: 192 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +NSWG    ++G+F+I RG   CGI  +   A ID
Sbjct: 237 KNSWGVGFGEKGYFRIFRGAGTCGINLVVSTAIID 271



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 41/61 (67%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ L HAVL VGYG +  IPYW+V+NSWG    ++G+F+I RG   CGI  +   A I
Sbjct: 211  CNPHGLNHAVLTVGYGTEFGIPYWIVKNSWGVGFGEKGYFRIFRGAGTCGINLVVSTAII 270

Query: 1025 D 1025
            D
Sbjct: 271  D 271


>gi|328788558|ref|XP_392381.3| PREDICTED: putative cysteine proteinase CG12163-like [Apis
           mellifera]
          Length = 881

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 161/318 (50%), Gaps = 31/318 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           F+ FI+K  + +++  E + RF+ FKQ+    +E          YG + F+D +P+E   
Sbjct: 576 FEDFIIKFNKTFSSTNEKQNRFQIFKQNLKIINELQTFEQGTAEYGVTMFADLTPKEFKT 635

Query: 343 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
           +  GF+   +    I   + +V  + +        P  +DWR  NV  P  DQ  CGSCW
Sbjct: 636 RYLGFRPELKQENEIPLAKIEVSDIFL--------PLKFDWRDYNVVTPVKDQGLCGSCW 687

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESE 459
           AFS+ G +EGQYAIK  KL+  S+ +L++C     GC G   +   + IE     GLE E
Sbjct: 688 AFSVTGNVEGQYAIKYKKLLSLSEQELLDCDTLDEGCNGGYMENAYKAIEKL--GGLELE 745

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
            DYPY   +G   KC + K   K+         +    M + L K GP+S+G+N++ + F
Sbjct: 746 SDYPY---DGRNEKCHFFKKNAKVQVVGAVNITSNETKMAQWLIKNGPISIGINANAMQF 802

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGK------QDDIPYWLARNSWGPIGPDEGFFKI 573
           Y G         C+P DL H VL+VGYG          +PYW+ +NSWG    + G++++
Sbjct: 803 YIGGVSHPFHFLCNPKDLDHGVLIVGYGISKYPLFHKKLPYWIIKNSWGSRWGENGYYRV 862

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+  CG+  +A  A +
Sbjct: 863 YRGDGTCGVNAMASSAIV 880



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 167/318 (52%), Gaps = 32/318 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           F+ FI+K  + +++  E + RF+ FKQ+    +E          YG + F+D +P+E   
Sbjct: 576 FEDFIIKFNKTFSSTNEKQNRFQIFKQNLKIINELQTFEQGTAEYGVTMFADLTPKEFKT 635

Query: 709 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
           +  GF+   +    I   + +V  + +        P  +DWR  NV  P  DQ  CGSCW
Sbjct: 636 RYLGFRPELKQENEIPLAKIEVSDIFL--------PLKFDWRDYNVVTPVKDQGLCGSCW 687

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKD 826
           AFS+ G +EGQYAIK  KL+  S+ +L++C     GC+G + E + +   +  GLE E D
Sbjct: 688 AFSVTGNVEGQYAIKYKKLLSLSEQELLDCDTLDEGCNGGYMENAYKAIEKLGGLELESD 747

Query: 827 YPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHD 884
           YPY   +G   KC + K   K+   G   ++   +ET M + L K GP+S+ +N++ +  
Sbjct: 748 YPY---DGRNEKCHFFKKNAKVQVVGA--VNITSNETKMAQWLIKNGPISIGINANAMQF 802

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGK------QDNIPYWLVRNSWGPIGPDEGFFKI 938
           Y G         C+P DL H VL+VGYG          +PYW+++NSWG    + G++++
Sbjct: 803 YIGGVSHPFHFLCNPKDLDHGVLIVGYGISKYPLFHKKLPYWIIKNSWGSRWGENGYYRV 862

Query: 939 ERGNNACGIEQIAGYATI 956
            RG+  CG+  +A  A +
Sbjct: 863 YRGDGTCGVNAMASSAIV 880



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 126/224 (56%), Gaps = 14/224 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR  NV  P  DQ  CGSCWAFS+ G +EGQYAIK  KL+  S+ +L++C    
Sbjct: 662 LPLKFDWRDYNVVTPVKDQGLCGSCWAFSVTGNVEGQYAIKYKKLLSLSEQELLDCDTLD 721

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG 128
            GC+G + E + +   +  GLE E DYPY   +G   KC + K   K+   G   ++   
Sbjct: 722 EGCNGGYMENAYKAIEKLGGLELESDYPY---DGRNEKCHFFKKNAKVQVVGA--VNITS 776

Query: 129 SET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK----- 182
           +ET M + L K GP+S+ +N++ +  Y G         C+P DL H VL+VGYG      
Sbjct: 777 NETKMAQWLIKNGPISIGINANAMQFYIGGVSHPFHFLCNPKDLDHGVLIVGYGISKYPL 836

Query: 183 -QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
               +PYW+++NSWG    + G++++ RG+  CG+  +A  A +
Sbjct: 837 FHKKLPYWIIKNSWGSRWGENGYYRVYRGDGTCGVNAMASSAIV 880


>gi|427777627|gb|JAA54265.1| Putative cathepsin f-like cysteine protease [Rhipicephalus
           pulchellus]
          Length = 475

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 178/359 (49%), Gaps = 35/359 (9%)

Query: 253 SCLCLPSLTDRITDQVVARVDTLA-IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKE 311
           +C    S+  RI+  +  +  T A +   L    E  L  F  F     + Y + EE + 
Sbjct: 128 TCEAAMSIVTRISGVLDPKDLTFAYLSKHLKLSQERSL--FSVFARTYNKTYKDKEEHEA 185

Query: 312 RFEYFKQDGHK---------KHERYGTSEFSDRSPEEILCKTGFKWSERTY---ERIVAD 359
           RF  FK +  +             YG +EFSD SP E          ER Y   ++ +A+
Sbjct: 186 RFMIFKNNLKRIALFNRLEEGTAHYGLTEFSDLSPSEF---------ERHYLGLKKDLAE 236

Query: 360 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 419
            +   K +     + P+PD +DWR K       +Q  CGSCWAFS+ G +EGQ+ +   K
Sbjct: 237 HKAEVKPIKVGPVNEPLPDLFDWRTKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLSRSK 296

Query: 420 LVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGE-KFKCAYDK 478
           L+  S+ +LV+C     GC G    +         GLE+E +YPY+  +G  +F     K
Sbjct: 297 LLSLSEQELVDCDHGDHGCKGGYMGQAMKAVIEMGGLETESEYPYKGVDGTCEFNKTESK 356

Query: 479 SKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLG 538
           ++V+ F G   L  N +E +   L K+GP+S+G+N++ + FY G         CSP DL 
Sbjct: 357 ARVQSFVG---LPQNETE-LAYWLMKHGPVSIGINANAMQFYFGGISHPWKFLCSPTDLD 412

Query: 539 HAVLLVGYG------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           H VLLVG+G      ++  +PYW+ +NSWG    ++G++++ RG+  CG+ Q+A  A +
Sbjct: 413 HGVLLVGFGVDKRSFRRKPVPYWIVKNSWGKYWGEKGYYRVYRGDGTCGVNQMALSAVV 471



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 180/359 (50%), Gaps = 36/359 (10%)

Query: 619 SCLCLPSLTDRITDQVVARVDTLA-IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKE 677
           +C    S+  RI+  +  +  T A +   L    E  L  F  F     + Y + EE + 
Sbjct: 128 TCEAAMSIVTRISGVLDPKDLTFAYLSKHLKLSQERSL--FSVFARTYNKTYKDKEEHEA 185

Query: 678 RFEYFKQDGHK---------KHERYGTSEFSDRSPEEILCKTGFKWSERTY---ERIVAD 725
           RF  FK +  +             YG +EFSD SP E          ER Y   ++ +A+
Sbjct: 186 RFMIFKNNLKRIALFNRLEEGTAHYGLTEFSDLSPSEF---------ERHYLGLKKDLAE 236

Query: 726 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 785
            +   K +     + P+PD +DWR K       +Q  CGSCWAFS+ G +EGQ+ +   K
Sbjct: 237 HKAEVKPIKVGPVNEPLPDLFDWRTKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLSRSK 296

Query: 786 LVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGE-KFKCAYDK 843
           L+  S+ +LV+C     GC G +   +++      GLE+E +YPYK  +G  +F     K
Sbjct: 297 LLSLSEQELVDCDHGDHGCKGGYMGQAMKAVIEMGGLETESEYPYKGVDGTCEFNKTESK 356

Query: 844 SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 903
           ++V+ F G   L  N +E +   L K+GP+S+ +N++ +  Y G         CSP DL 
Sbjct: 357 ARVQSFVG---LPQNETE-LAYWLMKHGPVSIGINANAMQFYFGGISHPWKFLCSPTDLD 412

Query: 904 HAVLLVGYG------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           H VLLVG+G      ++  +PYW+V+NSWG    ++G++++ RG+  CG+ Q+A  A +
Sbjct: 413 HGVLLVGFGVDKRSFRRKPVPYWIVKNSWGKYWGEKGYYRVYRGDGTCGVNQMALSAVV 471



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 129/224 (57%), Gaps = 12/224 (5%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P+PD +DWR K       +Q  CGSCWAFS+ G +EGQ+ +   KL+  S+ +LV+C   
Sbjct: 252 PLPDLFDWRTKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLSRSKLLSLSEQELVDCDHG 311

Query: 70  CSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFN 127
             GC G +   +++      GLE+E +YPYK  +G  +F     K++V+ F G   L  N
Sbjct: 312 DHGCKGGYMGQAMKAVIEMGGLETESEYPYKGVDGTCEFNKTESKARVQSFVG---LPQN 368

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG------ 181
            +E +   L K+GP+S+ +N++ +  Y G         CSP DL H VLLVG+G      
Sbjct: 369 ETE-LAYWLMKHGPVSIGINANAMQFYFGGISHPWKFLCSPTDLDHGVLLVGFGVDKRSF 427

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           ++  +PYW+V+NSWG    ++G++++ RG+  CG+ Q+A  A +
Sbjct: 428 RRKPVPYWIVKNSWGKYWGEKGYYRVYRGDGTCGVNQMALSAVV 471


>gi|340053965|emb|CCC48258.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 441

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 154/312 (49%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 709
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ +CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGSCGSCWSF 146

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKD 826
           S  G +EGQ+A     L   S+  LV C  + +GC G   + + E+    +   + +EK 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKENSGKVYTEKS 206

Query: 827 YPYKNANGEKFKCAYDKSKV-KLFTGK-DFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           YPY +  GE+  C     KV    TG  D  H    + + K L   GP++V +++     
Sbjct: 207 YPYVSGGGEEPPCKPRGHKVGATITGHVDIPH--DEDAIAKYLADNGPVAVAVDATTFMS 264

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y+G  +     +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N 
Sbjct: 265 YSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQ 320

Query: 945 CGIEQIAGYATI 956
           C + Q+A  A +
Sbjct: 321 CLVAQLASSAVV 332



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 151/310 (48%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 343
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ +CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGSCGSCWSF 146

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKD 461
           S  G +EGQ+A     L   S+  LV C  + +GCGG   D   + I   +   + +EK 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKENSGKVYTEKS 206

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           YPY +G GE+  C     KV           +  + + K L   GP++V +++     Y+
Sbjct: 207 YPYVSGGGEEPPCKPRGHKVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATTFMSYS 266

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
           G  +     +C+   L H VLLVGY      PYW+ +NSW     ++G+ +IE+G N C 
Sbjct: 267 GGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCL 322

Query: 582 IEQIAGYATI 591
           + Q+A  A +
Sbjct: 323 VAQLASSAVV 332



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 113/222 (50%), Gaps = 11/222 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCW+FS  G +EGQ+A     L   S+  LV C  
Sbjct: 117 GKAPAAVDWRRKGAVTPVKDQGSCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDT 176

Query: 69  QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK-DF 123
           + +GC G   + + E+    +   + +EK YPY +  GE+  C     KV    TG  D 
Sbjct: 177 KDNGCGGGLMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDI 236

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            H    + + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY   
Sbjct: 237 PH--DEDAIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDS 290

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
              PYW+++NSW     ++G+ +IE+G N C + Q+A  A +
Sbjct: 291 SKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAVV 332



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N C + Q+A  A 
Sbjct: 272  SCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAV 331

Query: 1024 I 1024
            +
Sbjct: 332  V 332


>gi|395742406|ref|XP_003777749.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Pongo abelii]
          Length = 490

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 161/353 (45%), Gaps = 24/353 (6%)

Query: 250 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEE 308
            + S L  P   +R  ++  + V +L  E  L  D    +   FK F++   R Y + EE
Sbjct: 152 AMISSLSQPHPDNR--NETFSSVISLLNEDPLPQDLPVKMASIFKNFVITYNRTYESKEE 209

Query: 309 IKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVAD 359
            + R   F  +  +  +         +YG ++FSD + EE             Y   +  
Sbjct: 210 ARWRLSIFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNPLLR 260

Query: 360 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 419
            E   KM          P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G 
Sbjct: 261 EEPSNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGT 320

Query: 420 LVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS 479
           L+  S+ +L++C K    C G           +  GLE+E DY Y+   G    C +   
Sbjct: 321 LLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAE 377

Query: 480 KVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGH 539
           K K++           + +   L K GP+SV +N+  + FY     R     CSP+ + H
Sbjct: 378 KAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDH 437

Query: 540 AVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           AVLLVGYG + D+P+W  +NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 438 AVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 490



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 165/355 (46%), Gaps = 29/355 (8%)

Query: 616 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEE 674
            + S L  P   +R  ++  + V +L  E  L  D    +   FK F++   R Y + EE
Sbjct: 152 AMISSLSQPHPDNR--NETFSSVISLLNEDPLPQDLPVKMASIFKNFVITYNRTYESKEE 209

Query: 675 IKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVAD 725
            + R   F  +  +  +         +YG ++FSD + EE             Y   +  
Sbjct: 210 ARWRLSIFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNPLLR 260

Query: 726 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 785
            E   KM          P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G 
Sbjct: 261 EEPSNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGT 320

Query: 786 LVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYD 842
           L+  S+ +L++C K    C G    PS  Y+   +  GLE+E DY Y+   G    C + 
Sbjct: 321 LLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFS 375

Query: 843 KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDL 902
             K K++           + +   L K GP+SV +N+  +  Y     R     CSP+ +
Sbjct: 376 AEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLI 435

Query: 903 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
            HAVLLVGYG + ++P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 436 DHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 490



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 277 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 336

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 337 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 391

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 392 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 451

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 452 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 490



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 430  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 489

Query: 1025 D 1025
            D
Sbjct: 490  D 490


>gi|90592736|ref|YP_529689.1| VCATH [Agrotis segetum nucleopolyhedrovirus]
 gi|71559186|gb|AAZ38185.1| VCATH [Agrotis segetum nucleopolyhedrovirus]
          Length = 343

 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 179/351 (50%), Gaps = 32/351 (9%)

Query: 621 LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFE 680
           L + +L +   +++V    T A + SL ++  +  + F+ FI +  +QY N+ E + RF 
Sbjct: 9   LVVNALLNWRDNELVDAAGTAANKPSL-YNINSAPQYFEQFISQYNKQYKNEAEKRHRFN 67

Query: 681 YFK---QDGHKKHER-----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 732
            F    ++ ++K+ R     Y  + F+D +  E++ +         +  + +  E     
Sbjct: 68  IFMHNIEEINQKNSRNDSAVYKINRFADMTKNEVVIR---------HTGLASIGELNSNF 118

Query: 733 LMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVE 788
              V  DGP     P ++DWR  N      DQ+ CG+CWAF+  G LE QYAIK  +L++
Sbjct: 119 CETVVVDGPGQRQRPSSFDWRTYNKVTSVKDQSMCGACWAFASLGALESQYAIKYDRLID 178

Query: 789 FSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVK 847
            ++ QLV+C     GCDG     + E   Q  G+E E DYPY+    E+  CA    K  
Sbjct: 179 LAEQQLVDCDFVDMGCDGGLIHTAYEQIMQMGGVEQEFDYPYR---AERQPCALKPHKFA 235

Query: 848 LFTGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 906
               K F +     E ++ +L   GP+++ +++  + DY G  +      C    L HAV
Sbjct: 236 AGVRKCFRYVLRNEERLEDLLRHVGPIAIAVDAVDLTDYYGGIV----SFCENNGLNHAV 291

Query: 907 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 956
           LLVGYG ++N+P+W ++NSWG    ++G+ ++ RG N+CG + ++A  A +
Sbjct: 292 LLVGYGVENNVPFWTLKNSWGSDYGEDGYVRVRRGVNSCGLVNELASSAQV 342



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 174/352 (49%), Gaps = 33/352 (9%)

Query: 255 LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFE 314
           L + +L +   +++V    T A + SL ++  +  + F+ FI +  +QY N+ E + RF 
Sbjct: 9   LVVNALLNWRDNELVDAAGTAANKPSL-YNINSAPQYFEQFISQYNKQYKNEAEKRHRFN 67

Query: 315 YFK---QDGHKKHER-----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 366
            F    ++ ++K+ R     Y  + F+D +  E++ +         +  + +  E     
Sbjct: 68  IFMHNIEEINQKNSRNDSAVYKINRFADMTKNEVVIR---------HTGLASIGELNSNF 118

Query: 367 LMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVE 422
              V  DGP     P ++DWR  N      DQ+ CG+CWAF+  G LE QYAIK  +L++
Sbjct: 119 CETVVVDGPGQRQRPSSFDWRTYNKVTSVKDQSMCGACWAFASLGALESQYAIKYDRLID 178

Query: 423 FSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVK 482
            ++ QLV+C     GC G        +     G+E E DYPYR    E+  CA    K  
Sbjct: 179 LAEQQLVDCDFVDMGCDGGLIHTAYEQIMQMGGVEQEFDYPYR---AERQPCALKPHKFA 235

Query: 483 LFTGKDFLY-FNGSETMKKILYKYGPLSVGLNS-HLIHFYNGTPIRKNDETCSPYDLGHA 540
               K F Y     E ++ +L   GP+++ +++  L  +Y G         C    L HA
Sbjct: 236 AGVRKCFRYVLRNEERLEDLLRHVGPIAIAVDAVDLTDYYGGIV-----SFCENNGLNHA 290

Query: 541 VLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 591
           VLLVGYG ++++P+W  +NSWG    ++G+ ++ RG N+CG + ++A  A +
Sbjct: 291 VLLVGYGVENNVPFWTLKNSWGSDYGEDGYVRVRRGVNSCGLVNELASSAQV 342



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 14/228 (6%)

Query: 5   VEKDGP----VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
           V  DGP     P ++DWR  N      DQ+ CG+CWAF+  G LE QYAIK  +L++ ++
Sbjct: 122 VVVDGPGQRQRPSSFDWRTYNKVTSVKDQSMCGACWAFASLGALESQYAIKYDRLIDLAE 181

Query: 61  SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
            QLV+C     GCDG     + E   Q  G+E E DYPY+    E+  CA    K     
Sbjct: 182 QQLVDCDFVDMGCDGGLIHTAYEQIMQMGGVEQEFDYPYR---AERQPCALKPHKFAAGV 238

Query: 120 GKDFLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 178
            K F +     E ++ +L   GP+++ +++  + DY G  +      C    L HAVLLV
Sbjct: 239 RKCFRYVLRNEERLEDLLRHVGPIAIAVDAVDLTDYYGGIV----SFCENNGLNHAVLLV 294

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
           GYG ++N+P+W ++NSWG    ++G+ ++ RG N+CG + ++A  A +
Sbjct: 295 GYGVENNVPFWTLKNSWGSDYGEDGYVRVRRGVNSCGLVNELASSAQV 342



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYAT 1023
            C    L HAVLLVGYG ++++P+W ++NSWG    ++G+ ++ RG N+CG + ++A  A 
Sbjct: 282  CENNGLNHAVLLVGYGVENNVPFWTLKNSWGSDYGEDGYVRVRRGVNSCGLVNELASSAQ 341

Query: 1024 I 1024
            +
Sbjct: 342  V 342


>gi|380025691|ref|XP_003696602.1| PREDICTED: putative cysteine proteinase CG12163-like [Apis florea]
          Length = 881

 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 160/318 (50%), Gaps = 31/318 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           F+ FI+K  + +++  E + RF+ FKQ+     E          YG + F+D +P+E   
Sbjct: 576 FEDFIIKFNKTFSSTNEKQNRFQIFKQNLKIIKELQTFEQGTAEYGVTMFADLTPKEFKT 635

Query: 343 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
           +  GF+   +    I   + +V  + +        P  +DWR  N   P  DQ  CGSCW
Sbjct: 636 RYLGFRPELKQENEIPLAKIEVSDIFL--------PPKFDWRDYNAVTPVKDQGLCGSCW 687

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESE 459
           AFS+ G +EGQYAIK  KL+  S+ +L++C     GC G   +   + IE     GLE E
Sbjct: 688 AFSVTGNVEGQYAIKYKKLLSLSEQELLDCDTLDEGCNGGYMENAYKAIEKL--GGLELE 745

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
            DYPY   +G   KC + K   K+         +    M + L K GP+S+G+N++ + F
Sbjct: 746 SDYPY---DGRNEKCHFFKKNAKVQVVGAVNITSNETKMAQWLIKNGPISIGINANAMQF 802

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGK------QDDIPYWLARNSWGPIGPDEGFFKI 573
           Y G         C+P DL H VL+VGYG         ++PYW+ +NSWG    + G++++
Sbjct: 803 YIGGVSHPFHFLCNPKDLDHGVLIVGYGISKYPLFHKELPYWIIKNSWGSRWGENGYYRV 862

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+  CG+  +A  A +
Sbjct: 863 YRGDGTCGVNAMASSAIV 880



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 165/318 (51%), Gaps = 32/318 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           F+ FI+K  + +++  E + RF+ FKQ+     E          YG + F+D +P+E   
Sbjct: 576 FEDFIIKFNKTFSSTNEKQNRFQIFKQNLKIIKELQTFEQGTAEYGVTMFADLTPKEFKT 635

Query: 709 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
           +  GF+   +    I   + +V  + +        P  +DWR  N   P  DQ  CGSCW
Sbjct: 636 RYLGFRPELKQENEIPLAKIEVSDIFL--------PPKFDWRDYNAVTPVKDQGLCGSCW 687

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKD 826
           AFS+ G +EGQYAIK  KL+  S+ +L++C     GC+G + E + +   +  GLE E D
Sbjct: 688 AFSVTGNVEGQYAIKYKKLLSLSEQELLDCDTLDEGCNGGYMENAYKAIEKLGGLELESD 747

Query: 827 YPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHD 884
           YPY   +G   KC + K   K+   G   ++   +ET M + L K GP+S+ +N++ +  
Sbjct: 748 YPY---DGRNEKCHFFKKNAKVQVVGA--VNITSNETKMAQWLIKNGPISIGINANAMQF 802

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGK------QDNIPYWLVRNSWGPIGPDEGFFKI 938
           Y G         C+P DL H VL+VGYG          +PYW+++NSWG    + G++++
Sbjct: 803 YIGGVSHPFHFLCNPKDLDHGVLIVGYGISKYPLFHKELPYWIIKNSWGSRWGENGYYRV 862

Query: 939 ERGNNACGIEQIAGYATI 956
            RG+  CG+  +A  A +
Sbjct: 863 YRGDGTCGVNAMASSAIV 880



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 125/224 (55%), Gaps = 14/224 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR  N   P  DQ  CGSCWAFS+ G +EGQYAIK  KL+  S+ +L++C    
Sbjct: 662 LPPKFDWRDYNAVTPVKDQGLCGSCWAFSVTGNVEGQYAIKYKKLLSLSEQELLDCDTLD 721

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG 128
            GC+G + E + +   +  GLE E DYPY   +G   KC + K   K+   G   ++   
Sbjct: 722 EGCNGGYMENAYKAIEKLGGLELESDYPY---DGRNEKCHFFKKNAKVQVVGA--VNITS 776

Query: 129 SET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK----- 182
           +ET M + L K GP+S+ +N++ +  Y G         C+P DL H VL+VGYG      
Sbjct: 777 NETKMAQWLIKNGPISIGINANAMQFYIGGVSHPFHFLCNPKDLDHGVLIVGYGISKYPL 836

Query: 183 -QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
               +PYW+++NSWG    + G++++ RG+  CG+  +A  A +
Sbjct: 837 FHKELPYWIIKNSWGSRWGENGYYRVYRGDGTCGVNAMASSAIV 880


>gi|83944664|gb|ABC48936.1| cathepsin F like protease [Glossina morsitans morsitans]
          Length = 471

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 157/318 (49%), Gaps = 31/318 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 342
           F  F +K  R Y    E + RF  FKQ+           +   +YG +EF+D +  E   
Sbjct: 166 FAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYGITEFADMTSPEYKQ 225

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +TG  W     +     + ++  +         +P  +DWR+K       +Q  CGSCWA
Sbjct: 226 RTGL-WQRDPQKAASNPKAEIPNI--------DLPKEFDWREKGAISAVKNQGNCGSCWA 276

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS+ G +EG +A++TG L ++S+ +L++C    S C G   D   + IE     GLE E 
Sbjct: 277 FSVTGNIEGLHAVRTGVLEQYSEQELLDCDTSDSACNGGLPDNAYEAIEKI--GGLELES 334

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY 520
           DYPY   +  K +C ++ +K+ +              + + L   GP+S+G+N++ + FY
Sbjct: 335 DYPY---HARKDQCHFNSTKIHVKVKGHVDLPKNETAIAQWLIANGPISIGINANAMQFY 391

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNSWGPIGPDEGFFKIE 574
            G         CS  +L H VL+VGY   D       +PYW+ +NSWG    ++G++++ 
Sbjct: 392 RGGVSHPPHILCSRKNLDHGVLIVGYRVSDYPMFKKTLPYWIVKNSWGKKWGEQGYYRVY 451

Query: 575 RGNNACGIEQIAGYATID 592
           RG+N CG+ +++  A +D
Sbjct: 452 RGDNTCGVSEMSSSAVLD 469



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 162/317 (51%), Gaps = 30/317 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 708
           F  F +K  R Y    E + RF  FKQ+           +   +YG +EF+D +  E   
Sbjct: 166 FAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYGITEFADMTSPEYKQ 225

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +TG  W     +     + ++  +         +P  +DWR+K       +Q  CGSCWA
Sbjct: 226 RTGL-WQRDPQKAASNPKAEIPNI--------DLPKEFDWREKGAISAVKNQGNCGSCWA 276

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           FS+ G +EG +A++TG L ++S+ +L++C    S C+G   + + E   +  GLE E DY
Sbjct: 277 FSVTGNIEGLHAVRTGVLEQYSEQELLDCDTSDSACNGGLPDNAYEAIEKIGGLELESDY 336

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYN 886
           PY   +  K +C ++ +K+ +   K  +    +ET + + L   GP+S+ +N++ +  Y 
Sbjct: 337 PY---HARKDQCHFNSTKIHVKV-KGHVDLPKNETAIAQWLIANGPISIGINANAMQFYR 392

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIER 940
           G         CS  +L H VL+VGY   D       +PYW+V+NSWG    ++G++++ R
Sbjct: 393 GGVSHPPHILCSRKNLDHGVLIVGYRVSDYPMFKKTLPYWIVKNSWGKKWGEQGYYRVYR 452

Query: 941 GNNACGIEQIAGYATID 957
           G+N CG+ +++  A +D
Sbjct: 453 GDNTCGVSEMSSSAVLD 469



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 129/224 (57%), Gaps = 12/224 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K       +Q +CGSCWAFS+ G +EG +A++TG L ++S+ +L++C    
Sbjct: 250 LPKEFDWREKGAISAVKNQGNCGSCWAFSVTGNIEGLHAVRTGVLEQYSEQELLDCDTSD 309

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           S C+G   + + E   +  GLE E DYPY   +  K +C ++ +K+ +   K  +    +
Sbjct: 310 SACNGGLPDNAYEAIEKIGGLELESDYPY---HARKDQCHFNSTKIHVKV-KGHVDLPKN 365

Query: 130 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD---- 184
           ET + + L   GP+S+ +N++ +  Y G         CS  +L H VL+VGY   D    
Sbjct: 366 ETAIAQWLIANGPISIGINANAMQFYRGGVSHPPHILCSRKNLDHGVLIVGYRVSDYPMF 425

Query: 185 --NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
              +PYW+V+NSWG    ++G++++ RG+N CG+ +++  A +D
Sbjct: 426 KKTLPYWIVKNSWGKKWGEQGYYRVYRGDNTCGVSEMSSSAVLD 469


>gi|19851|emb|CAA78365.1| tobacco pre-pro-cysteine proteinase [Nicotiana tabacum]
          Length = 365

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 177/375 (47%), Gaps = 59/375 (15%)

Query: 618 ASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKE 677
           +S +  P   D +  QVV+  +T   + S   + E+    FK+   K G+ YA++EE   
Sbjct: 16  SSAIAFPD-EDPLIRQVVSETET---DDSHLLNAEHHFSLFKS---KFGKIYASEEEHDH 68

Query: 678 RFEYFKQDGHKKH--------ERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 729
           RF+ FK +  +            +G ++FSD +P E           RTY  +   + KV
Sbjct: 69  RFKVFKANLRRARLNQLLDPSAEHGITKFSDLTPSEF---------RRTYLGLHKPKPKV 119

Query: 730 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 789
                 +     +P  +DWR         +Q +CGSCW+FS  G +EG + + TG+LV  
Sbjct: 120 NAEKAPILPTSDLPADYDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSL 179

Query: 790 SKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKC 839
           S+ QLV+C  +C         +GC G     + EYT +A GL+ EKDYPY   +G   KC
Sbjct: 180 SEQQLVDCDHECDSEQQDSCDAGCGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG---KC 236

Query: 840 AYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKN 893
            +DKSK+        +     + +   L K+GPL+V +N+  +  Y G    P+   ++ 
Sbjct: 237 HFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQ 296

Query: 894 DETCSPYDLGHAVLLVGYGKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACG 946
           D         H VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG
Sbjct: 297 D---------HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICG 347

Query: 947 IEQIAGYATIDVVKN 961
           ++ +    T     N
Sbjct: 348 VDAMVSTVTAAHTTN 362



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 177/370 (47%), Gaps = 60/370 (16%)

Query: 252 ASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKE 311
           +S +  P   D +  QVV+  +T   + S   + E+    FK+   K G+ YA++EE   
Sbjct: 16  SSAIAFPD-EDPLIRQVVSETET---DDSHLLNAEHHFSLFKS---KFGKIYASEEEHDH 68

Query: 312 RFEYFKQDGHKKH--------ERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 363
           RF+ FK +  +            +G ++FSD +P E           RTY  +   + KV
Sbjct: 69  RFKVFKANLRRARLNQLLDPSAEHGITKFSDLTPSEF---------RRTYLGLHKPKPKV 119

Query: 364 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 423
                 +     +P  +DWR         +Q +CGSCW+FS  G +EG + + TG+LV  
Sbjct: 120 NAEKAPILPTSDLPADYDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSL 179

Query: 424 SKSQLVECAKQC---------SGCGGCDGLEQPIEYTHQA-GLESEKDYPYRNGNGEKFK 473
           S+ QLV+C  +C         +GCGG   +    EYT +A GL+ EKDYPY   +G   K
Sbjct: 180 SEQQLVDCDHECDSEQQDSCDAGCGG-GLMTTAFEYTLKAGGLQLEKDYPYTGKDG---K 235

Query: 474 CAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG---TPI---RK 527
           C +DKSK+        +     + +   L K+GPL+VG+N+  +  Y G    P+   ++
Sbjct: 236 CHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKR 295

Query: 528 NDETCSPYDLGHAVLLVGYGKQDDIP-------YWLARNSWGPIGPDEGFFKIERGNNAC 580
            D         H VLLVGYG     P       YW+ +NSWG    + G++KI RG+N C
Sbjct: 296 QD---------HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNIC 346

Query: 581 GIEQIAGYAT 590
           G++ +    T
Sbjct: 347 GVDAMVSTVT 356



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 35/237 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         +Q  CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C
Sbjct: 132 LPADYDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHEC 191

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC G     + EYT +A GL+ EKDYPY   +G   KC +DKSK+     
Sbjct: 192 DSEQQDSCDAGCGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG---KCHFDKSKIAAAVT 248

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKNDETCSPYDLGHA 174
              +     + +   L K+GPL+V +N+  +  Y G    P+   ++ D         H 
Sbjct: 249 NFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD---------HG 299

Query: 175 VLLVGYGKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 300 VLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 356



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 7/59 (11%)

Query: 972  HAVLLVGYGKQDDIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            H VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 298  HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 356


>gi|6467382|gb|AAF13146.1|AF136279_1 cathepsin F precursor [Homo sapiens]
          Length = 484

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 157/337 (46%), Gaps = 22/337 (6%)

Query: 266 DQVVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 324
           ++  + V +L  E  L+ D    +   FK F++   R Y + EE + R   F  +  +  
Sbjct: 160 NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ 219

Query: 325 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
           +         +YG ++FSD + EE             Y   +  +E   KM         
Sbjct: 220 KIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNTLLRKEPGNKMKQAKSVGDL 270

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            P  WDWR K       DQ  CGSCWAFS+ G ++GQ+ +  G L+  S+ +L++C K  
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVKGQWFLNQGTLLSLSEQELLDCDKMD 330

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
             C G           +  GLE+E DY Y+   G    C +   K K++           
Sbjct: 331 KACMGGLPSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNE 387

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           + +   L K GP+SV +N+  + FY     R     CSP+ + HAVLLVGYG + D+P+W
Sbjct: 388 QKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFW 447

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
             +NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 448 AIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 484



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 161/339 (47%), Gaps = 27/339 (7%)

Query: 632 DQVVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 690
           ++  + V +L  E  L+ D    +   FK F++   R Y + EE + R   F  +  +  
Sbjct: 160 NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ 219

Query: 691 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
           +         +YG ++FSD + EE             Y   +  +E   KM         
Sbjct: 220 KIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNTLLRKEPGNKMKQAKSVGDL 270

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            P  WDWR K       DQ  CGSCWAFS+ G ++GQ+ +  G L+  S+ +L++C K  
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVKGQWFLNQGTLLSLSEQELLDCDKMD 330

Query: 802 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 331 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 385

Query: 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 386 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 445

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 446 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 484



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G ++GQ+ +  G L+  S+ +L++C K  
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVKGQWFLNQGTLLSLSEQELLDCDKMD 330

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 331 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 385

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 386 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 445

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 446 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 484



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 424  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 483

Query: 1025 D 1025
            D
Sbjct: 484  D 484


>gi|28192375|gb|AAK07731.1| CPR2-like cysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 185/389 (47%), Gaps = 64/389 (16%)

Query: 608 IQAVFLLCGVASCLCLPSLT----DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 663
           ++ +FLL  +A  L   ++     D +  QVV+  D      S   + E+    FK+   
Sbjct: 1   MERLFLLSLLAFVLFSSAIAFSDEDPLIRQVVSETDD-----SHLLNAEHHFSLFKS--- 52

Query: 664 KRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCKTGFKWS 715
           K G+ YA++EE   RF+ FK +  +  +H+       +G ++FSD +P E          
Sbjct: 53  KFGKIYASEEEHDHRFKVFKANRRRARRHQLLDPSAEHGITKFSDLTPSEF--------- 103

Query: 716 ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGML 775
            RTY  +   + K+      +     +P  +DWR         +Q +CGSCW+FS  G +
Sbjct: 104 RRTYLGLHKPKPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAV 163

Query: 776 EGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEK 825
           EG + + TG+LV  S+ QLV+C  +C         +GC G     + EYT +A GL+ EK
Sbjct: 164 EGAHFLATGELVSLSEQQLVDCDHECDPEQQDACDAGCGGGLMTTAFEYTLKAGGLQLEK 223

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DYPY   +G   KC +DKSK+        +     + +   L K+GPL+V +N+  +  Y
Sbjct: 224 DYPYTGKDG---KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTY 280

Query: 886 NG---TPI---RKNDETCSPYDLGHAVLLVGYGKQDNIP-------YWLVRNSWGPIGPD 932
            G    P+   ++ D         H VLLVGYG     P       YW+++NSWG    +
Sbjct: 281 VGGVSCPLICFKRQD---------HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGE 331

Query: 933 EGFFKIERGNNACGIEQIAGYATIDVVKN 961
            G++KI RG+N CG++ +    T     N
Sbjct: 332 HGYYKICRGHNICGVDAMVSTVTAAHTTN 360



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 185/384 (48%), Gaps = 65/384 (16%)

Query: 242 IQAVFLLCGVASCLCLPSLT----DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 297
           ++ +FLL  +A  L   ++     D +  QVV+  D      S   + E+    FK+   
Sbjct: 1   MERLFLLSLLAFVLFSSAIAFSDEDPLIRQVVSETDD-----SHLLNAEHHFSLFKS--- 52

Query: 298 KRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCKTGFKWS 349
           K G+ YA++EE   RF+ FK +  +  +H+       +G ++FSD +P E          
Sbjct: 53  KFGKIYASEEEHDHRFKVFKANRRRARRHQLLDPSAEHGITKFSDLTPSEF--------- 103

Query: 350 ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGML 409
            RTY  +   + K+      +     +P  +DWR         +Q +CGSCW+FS  G +
Sbjct: 104 RRTYLGLHKPKPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAV 163

Query: 410 EGQYAIKTGKLVEFSKSQLVECAKQC---------SGCGGCDGLEQPIEYTHQA-GLESE 459
           EG + + TG+LV  S+ QLV+C  +C         +GCGG   +    EYT +A GL+ E
Sbjct: 164 EGAHFLATGELVSLSEQQLVDCDHECDPEQQDACDAGCGG-GLMTTAFEYTLKAGGLQLE 222

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
           KDYPY   +G   KC +DKSK+        +     + +   L K+GPL+VG+N+  +  
Sbjct: 223 KDYPYTGKDG---KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQT 279

Query: 520 YNG---TPI---RKNDETCSPYDLGHAVLLVGYGKQDDIP-------YWLARNSWGPIGP 566
           Y G    P+   ++ D         H VLLVGYG     P       YW+ +NSWG    
Sbjct: 280 YVGGVSCPLICFKRQD---------HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWG 330

Query: 567 DEGFFKIERGNNACGIEQIAGYAT 590
           + G++KI RG+N CG++ +    T
Sbjct: 331 EHGYYKICRGHNICGVDAMVSTVT 354



 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 35/237 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         +Q  CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C
Sbjct: 130 LPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHEC 189

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC G     + EYT +A GL+ EKDYPY   +G   KC +DKSK+     
Sbjct: 190 DPEQQDACDAGCGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG---KCHFDKSKIAAAVT 246

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKNDETCSPYDLGHA 174
              +     + +   L K+GPL+V +N+  +  Y G    P+   ++ D         H 
Sbjct: 247 NFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD---------HG 297

Query: 175 VLLVGYGKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 298 VLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 354



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 7/59 (11%)

Query: 972  HAVLLVGYGKQDDIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            H VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 296  HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 354


>gi|37732137|gb|AAR02406.1| cysteine proteinase [Anthonomus grandis]
          Length = 322

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 170/340 (50%), Gaps = 38/340 (11%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-- 691
           V+  +  +A+  SL   ++ + ETFK   V+ G+ Y N  E  +RF  F+ +  +  +  
Sbjct: 5   VLIGLLIVAVNASLIEKHQALFETFK---VENGKSYRNQVEEVQRFNIFRANVLEIEQHN 61

Query: 692 ----------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
                     +   ++F+D + EE     G          I  + + +E           
Sbjct: 62  ALYEQGLVSYKKAINQFTDLTQEEFKAYLGLHVKPVLNNTIQYELKGLE----------- 110

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VP + DWR         +Q +CGSCW+F++ G  EG Y  K  +LV  S+ QLV+C+   
Sbjct: 111 VPTSVDWRSAGQVTGVKNQGSCGSCWSFALTGSTEGAYYRKHKQLVSLSEQQLVDCSTSI 170

Query: 802 S-GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
           + GC+G F + +  Y  Q GL++E  YPY   +G    C YD SKV +    +++  +GS
Sbjct: 171 NYGCNGGFLDATFPYIEQYGLQTESSYPYTGVDG---SCKYDSSKV-VTKISNYVSLHGS 226

Query: 861 ETMKKILY---KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 917
           E+  K+L      GP+++ +++  +  Y+      N   C+  +L HAVL+VGYG Q+  
Sbjct: 227 ES--KVLEPVGSIGPVAITMDASYLSSYSSGIYAANK--CTTTNLNHAVLVVGYGSQNGQ 282

Query: 918 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
            YW+V+NSWG    ++G+F++ RG+N CG  Q   Y  I+
Sbjct: 283 NYWIVKNSWGSGWGEQGYFRLLRGSNECGCAQDPVYPNIN 322



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 124/220 (56%), Gaps = 12/220 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VP + DWR         +Q  CGSCW+F++ G  EG Y  K  +LV  S+ QLV+C+   
Sbjct: 111 VPTSVDWRSAGQVTGVKNQGSCGSCWSFALTGSTEGAYYRKHKQLVSLSEQQLVDCSTSI 170

Query: 71  S-GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           + GC+G F + +  Y  Q GL++E  YPY   +G    C YD SKV +    +++  +GS
Sbjct: 171 NYGCNGGFLDATFPYIEQYGLQTESSYPYTGVDG---SCKYDSSKV-VTKISNYVSLHGS 226

Query: 130 ETMKKILY---KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           E+  K+L      GP+++ +++  +  Y+      N   C+  +L HAVL+VGYG Q+  
Sbjct: 227 ES--KVLEPVGSIGPVAITMDASYLSSYSSGIYAANK--CTTTNLNHAVLVVGYGSQNGQ 282

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            YW+V+NSWG    ++G+F++ RG+N CG  Q   Y  I+
Sbjct: 283 NYWIVKNSWGSGWGEQGYFRLLRGSNECGCAQDPVYPNIN 322



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 168/342 (49%), Gaps = 41/342 (11%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-- 325
           V+  +  +A+  SL   ++ + ETFK   V+ G+ Y N  E  +RF  F+ +  +  +  
Sbjct: 5   VLIGLLIVAVNASLIEKHQALFETFK---VENGKSYRNQVEEVQRFNIFRANVLEIEQHN 61

Query: 326 ----------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
                     +   ++F+D + EE     G          I  + + +E           
Sbjct: 62  ALYEQGLVSYKKAINQFTDLTQEEFKAYLGLHVKPVLNNTIQYELKGLE----------- 110

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VP + DWR         +Q +CGSCW+F++ G  EG Y  K  +LV  S+ QLV+C+   
Sbjct: 111 VPTSVDWRSAGQVTGVKNQGSCGSCWSFALTGSTEGAYYRKHKQLVSLSEQQLVDCSTSI 170

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN 493
           +   GC+G  L+    Y  Q GL++E  YPY   +G    C YD SKV +    +++  +
Sbjct: 171 NY--GCNGGFLDATFPYIEQYGLQTESSYPYTGVDG---SCKYDSSKV-VTKISNYVSLH 224

Query: 494 GSETMKKILY---KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
           GSE+  K+L      GP+++ +++  +  Y+      N   C+  +L HAVL+VGYG Q+
Sbjct: 225 GSES--KVLEPVGSIGPVAITMDASYLSSYSSGIYAANK--CTTTNLNHAVLVVGYGSQN 280

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
              YW+ +NSWG    ++G+F++ RG+N CG  Q   Y  I+
Sbjct: 281 GQNYWIVKNSWGSGWGEQGYFRLLRGSNECGCAQDPVYPNIN 322



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 41/61 (67%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+  +L HAVL+VGYG Q+   YW+V+NSWG    ++G+F++ RG+N CG  Q   Y  I
Sbjct: 262  CTTTNLNHAVLVVGYGSQNGQNYWIVKNSWGSGWGEQGYFRLLRGSNECGCAQDPVYPNI 321

Query: 1025 D 1025
            +
Sbjct: 322  N 322


>gi|49456321|emb|CAG46481.1| CTSF [Homo sapiens]
          Length = 338

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 146/314 (46%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 37  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 96

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 97  EF---------RTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 147

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+
Sbjct: 148 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLET 207

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
             DY Y+   G    C +   K K++           + +   L K GP+SV +N+  + 
Sbjct: 208 VDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQ 264

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY     R     CSP+ + HAVLLVGYG + D+P+W  +NSWG    ++G++ + RG+ 
Sbjct: 265 FYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSG 324

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A +D
Sbjct: 325 ACGVNTMASSAVVD 338



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 150/316 (47%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 37  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 96

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 97  EF---------RTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 147

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  GL
Sbjct: 148 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGL 205

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+  DY Y+   G    C +   K K++           + +   L K GP+SV +N+  
Sbjct: 206 ETVDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFG 262

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y     R     CSP+ + HAVLLVGYG + ++P+W ++NSWG    ++G++ + RG
Sbjct: 263 MQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRG 322

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A +D
Sbjct: 323 SGACGVNTMASSAVVD 338



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 125 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 184

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+  DY Y+   G    C +   K K++         
Sbjct: 185 KACMGGL--PSNAYSAIKNLGGLETVDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 239

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 240 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 299

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 300 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 338



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 278  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 337

Query: 1025 D 1025
            D
Sbjct: 338  D 338


>gi|291230041|ref|XP_002734978.1| PREDICTED: cysteine proteinase inhibitor-like [Saccoglossus
           kowalevskii]
          Length = 352

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 164/366 (44%), Gaps = 28/366 (7%)

Query: 238 AIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 297
           AI+ + AVFL         +   T  IT   V  +D +    + +   +   + F+ F+ 
Sbjct: 2   AILTLIAVFLSTVALGSQAIGPRT--ITINNVPMIDEIERNTNESGSVDKTQDLFQDFMK 59

Query: 298 KRGRQYANDEEIKERFEYFKQDGHKKHER----------YGTSEFSDRSPEEILCKTGFK 347
              ++Y  +EE + R++ F QD   K ER          YG ++F D S EE        
Sbjct: 60  TYDKKYDTEEEHQLRYQIF-QDNLLKAERLQQTEQATGQYGVTKFMDLSEEEF------- 111

Query: 348 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK--KNVTGPAGDQAACGSCWAFSI 405
              R Y      R     M       G  P A+DWR   KN      +Q  CGSCWAFS 
Sbjct: 112 ---RKYYLTPVWRGSDPHMKKAEIPKGTPPAAFDWRDADKNAVTKVKNQGTCGSCWAFST 168

Query: 406 AGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYR 465
            G +EGQ+ IK G LV  S+ +LV+C K   GC G        E     G+ SE DYPY 
Sbjct: 169 TGNIEGQWKIKKGTLVSLSEQELVDCDKLDQGCNGGLPSNAYQEIMRFGGIMSEDDYPY- 227

Query: 466 NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPI 525
              G    C  + +  K++             M   L   GP+S+G+N++ + FY G   
Sbjct: 228 --TGRDQDCKLNATLNKVYINGSMNISKDEGDMASWLAANGPISIGINANAMQFYFGGVS 285

Query: 526 RKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
                 C+P +L H VL+VGYG +D  PYW+ +NSWG     EG++ + RG   CG+ ++
Sbjct: 286 HPWKIFCNPENLDHGVLIVGYGTKDGTPYWIIKNSWGRSWGVEGYYLVYRGGGVCGLNEM 345

Query: 586 AGYATI 591
              A +
Sbjct: 346 CTSAIV 351



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 166/368 (45%), Gaps = 33/368 (8%)

Query: 604 AIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 663
           AI+ + AVFL         +   T  IT   V  +D +    + +   +   + F+ F+ 
Sbjct: 2   AILTLIAVFLSTVALGSQAIGPRT--ITINNVPMIDEIERNTNESGSVDKTQDLFQDFMK 59

Query: 664 KRGRQYANDEEIKERFEYFKQDGHKKHER----------YGTSEFSDRSPEEILCKTGFK 713
              ++Y  +EE + R++ F QD   K ER          YG ++F D S EE        
Sbjct: 60  TYDKKYDTEEEHQLRYQIF-QDNLLKAERLQQTEQATGQYGVTKFMDLSEEEF------- 111

Query: 714 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK--KNVTGPAGDQAACGSCWAFSI 771
              R Y      R     M       G  P A+DWR   KN      +Q  CGSCWAFS 
Sbjct: 112 ---RKYYLTPVWRGSDPHMKKAEIPKGTPPAAFDWRDADKNAVTKVKNQGTCGSCWAFST 168

Query: 772 AGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKDYP 828
            G +EGQ+ IK G LV  S+ +LV+C K   GC+G    PS  Y       G+ SE DYP
Sbjct: 169 TGNIEGQWKIKKGTLVSLSEQELVDCDKLDQGCNGGL--PSNAYQEIMRFGGIMSEDDYP 226

Query: 829 YKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGT 888
           Y    G    C  + +  K++             M   L   GP+S+ +N++ +  Y G 
Sbjct: 227 Y---TGRDQDCKLNATLNKVYINGSMNISKDEGDMASWLAANGPISIGINANAMQFYFGG 283

Query: 889 PIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 948
                   C+P +L H VL+VGYG +D  PYW+++NSWG     EG++ + RG   CG+ 
Sbjct: 284 VSHPWKIFCNPENLDHGVLIVGYGTKDGTPYWIIKNSWGRSWGVEGYYLVYRGGGVCGLN 343

Query: 949 QIAGYATI 956
           ++   A +
Sbjct: 344 EMCTSAIV 351



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 116/227 (51%), Gaps = 11/227 (4%)

Query: 4   EVEKDGPVPDAWDWRK--KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           E+ K  P P A+DWR   KN      +Q  CGSCWAFS  G +EGQ+ IK G LV  S+ 
Sbjct: 131 EIPKGTP-PAAFDWRDADKNAVTKVKNQGTCGSCWAFSTTGNIEGQWKIKKGTLVSLSEQ 189

Query: 62  QLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
           +LV+C K   GC+G    PS  Y       G+ SE DYPY    G    C  + +  K++
Sbjct: 190 ELVDCDKLDQGCNGGL--PSNAYQEIMRFGGIMSEDDYPY---TGRDQDCKLNATLNKVY 244

Query: 119 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 178
                        M   L   GP+S+ +N++ +  Y G         C+P +L H VL+V
Sbjct: 245 INGSMNISKDEGDMASWLAANGPISIGINANAMQFYFGGVSHPWKIFCNPENLDHGVLIV 304

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GYG +D  PYW+++NSWG     EG++ + RG   CG+ ++   A +
Sbjct: 305 GYGTKDGTPYWIIKNSWGRSWGVEGYYLVYRGGGVCGLNEMCTSAIV 351



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P +L H VL+VGYG +D  PYW+++NSWG     EG++ + RG   CG+ ++   A +
Sbjct: 292  CNPENLDHGVLIVGYGTKDGTPYWIIKNSWGRSWGVEGYYLVYRGGGVCGLNEMCTSAIV 351


>gi|5051468|emb|CAB44983.1| putative preprocysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 185/389 (47%), Gaps = 64/389 (16%)

Query: 608 IQAVFLLCGVASCLCLPSLT----DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 663
           ++ +FLL  +A  L   ++     D +  QVV+  D      S   + E+    FK+   
Sbjct: 1   MERLFLLSLLAFVLFSSAIAFSDEDPLIRQVVSETDD-----SHLLNAEHHFSLFKS--- 52

Query: 664 KRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCKTGFKWS 715
           K G+ YA++EE   RF+ FK +  +  +H+       +G ++FSD +P E          
Sbjct: 53  KFGKIYASEEEHDHRFKVFKANLRRARRHQLLDPSAEHGITKFSDLTPSEF--------- 103

Query: 716 ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGML 775
            RTY  +   + K+      +     +P  +DWR         +Q +CGSCW+FS  G +
Sbjct: 104 RRTYLGLHKPKPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAV 163

Query: 776 EGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEK 825
           EG + + TG+LV  S+ QLV+C  +C         +GC G     + EYT +A GL+ EK
Sbjct: 164 EGAHFLATGELVSLSEQQLVDCDHECDPEQQDACDAGCGGGLMTTAFEYTLKAGGLQLEK 223

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DYPY   +G   KC +DKSK+        +     + +   L K+GPL+V +N+  +  Y
Sbjct: 224 DYPYTGKDG---KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTY 280

Query: 886 NG---TPI---RKNDETCSPYDLGHAVLLVGYGKQDNIP-------YWLVRNSWGPIGPD 932
            G    P+   ++ D         H VLLVGYG     P       YW+++NSWG    +
Sbjct: 281 VGGVSCPLICFKRQD---------HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGE 331

Query: 933 EGFFKIERGNNACGIEQIAGYATIDVVKN 961
            G++KI RG+N CG++ +    T     N
Sbjct: 332 HGYYKICRGHNICGVDAMVSTVTAAHTTN 360



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 185/384 (48%), Gaps = 65/384 (16%)

Query: 242 IQAVFLLCGVASCLCLPSLT----DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 297
           ++ +FLL  +A  L   ++     D +  QVV+  D      S   + E+    FK+   
Sbjct: 1   MERLFLLSLLAFVLFSSAIAFSDEDPLIRQVVSETDD-----SHLLNAEHHFSLFKS--- 52

Query: 298 KRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCKTGFKWS 349
           K G+ YA++EE   RF+ FK +  +  +H+       +G ++FSD +P E          
Sbjct: 53  KFGKIYASEEEHDHRFKVFKANLRRARRHQLLDPSAEHGITKFSDLTPSEF--------- 103

Query: 350 ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGML 409
            RTY  +   + K+      +     +P  +DWR         +Q +CGSCW+FS  G +
Sbjct: 104 RRTYLGLHKPKPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAV 163

Query: 410 EGQYAIKTGKLVEFSKSQLVECAKQC---------SGCGGCDGLEQPIEYTHQA-GLESE 459
           EG + + TG+LV  S+ QLV+C  +C         +GCGG   +    EYT +A GL+ E
Sbjct: 164 EGAHFLATGELVSLSEQQLVDCDHECDPEQQDACDAGCGG-GLMTTAFEYTLKAGGLQLE 222

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
           KDYPY   +G   KC +DKSK+        +     + +   L K+GPL+VG+N+  +  
Sbjct: 223 KDYPYTGKDG---KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQT 279

Query: 520 YNG---TPI---RKNDETCSPYDLGHAVLLVGYGKQDDIP-------YWLARNSWGPIGP 566
           Y G    P+   ++ D         H VLLVGYG     P       YW+ +NSWG    
Sbjct: 280 YVGGVSCPLICFKRQD---------HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWG 330

Query: 567 DEGFFKIERGNNACGIEQIAGYAT 590
           + G++KI RG+N CG++ +    T
Sbjct: 331 EHGYYKICRGHNICGVDAMVSTVT 354



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 35/237 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         +Q  CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C
Sbjct: 130 LPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHEC 189

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC G     + EYT +A GL+ EKDYPY   +G   KC +DKSK+     
Sbjct: 190 DPEQQDACDAGCGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG---KCHFDKSKIAAAVT 246

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKNDETCSPYDLGHA 174
              +     + +   L K+GPL+V +N+  +  Y G    P+   ++ D         H 
Sbjct: 247 NFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD---------HG 297

Query: 175 VLLVGYGKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 298 VLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 354



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 7/59 (11%)

Query: 972  HAVLLVGYGKQDDIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            H VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 296  HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 354


>gi|297801998|ref|XP_002868883.1| hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314719|gb|EFH45142.1| hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 368

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 157/330 (47%), Gaps = 46/330 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK 709
           F  F  K G+ YA++EE   RF  FK +  +  +H+      R+G ++FSD +  E   K
Sbjct: 51  FSLFKSKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSARHGVTQFSDLTRSEFRKK 110

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                  R   ++  D  K   +  E      +P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 111 ---HLGVRAGFKLPKDANKAPILPTE-----NLPEDFDWRDRGAVTPVKNQGSCGSCWSF 162

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G     + EYT +  
Sbjct: 163 SATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTG 222

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY   +G+   C  DKSK+        +     E +   L K GPL+V +N+
Sbjct: 223 GLMKEEDYPYTGKDGK--TCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINA 280

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG            PYW+++NSWG 
Sbjct: 281 GYMQTYIGG-------VSCPYICTRRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGE 333

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATIDV 958
              + GF+KI +G N CG++ +    T  V
Sbjct: 334 TWGENGFYKICKGRNICGVDSLVSTVTAAV 363



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 157/330 (47%), Gaps = 45/330 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK 343
           F  F  K G+ YA++EE   RF  FK +  +  +H+      R+G ++FSD +  E   K
Sbjct: 51  FSLFKSKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSARHGVTQFSDLTRSEFRKK 110

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                  R   ++  D  K   +  E      +P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 111 ---HLGVRAGFKLPKDANKAPILPTE-----NLPEDFDWRDRGAVTPVKNQGSCGSCWSF 162

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G  +    EYT +  
Sbjct: 163 SATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTG 222

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY   +G+   C  DKSK+        +     E +   L K GPL+V +N+
Sbjct: 223 GLMKEEDYPYTGKDGK--TCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINA 280

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG          + PYW+ +NSWG 
Sbjct: 281 GYMQTYIGG-------VSCPYICTRRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGE 333

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATIDV 593
              + GF+KI +G N CG++ +    T  V
Sbjct: 334 TWGENGFYKICKGRNICGVDSLVSTVTAAV 363



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 118/238 (49%), Gaps = 30/238 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR +    P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 135 LPEDFDWRDRGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +  GL  E+DYPY   +G+   C  DKSK+     
Sbjct: 195 DPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGK--TCKLDKSKIVASVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 253 NFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGG-------VSCPYICTRRLNHGVL 305

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           LVGYG            PYW+++NSWG    + GF+KI +G N CG++ +    T  V
Sbjct: 306 LVGYGSAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSLVSTVTAAV 363


>gi|357162946|ref|XP_003579573.1| PREDICTED: cysteine proteinase 1-like [Brachypodium distachyon]
          Length = 376

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 191/396 (48%), Gaps = 58/396 (14%)

Query: 602 KKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAF 661
           ++  +++ AV LL GVA+ L  P + D + +QVV   +   +E        N    F +F
Sbjct: 5   RRLPIVVAAVLLLSGVAA-LSSP-VEDPLIEQVVGGDEKNELE-------LNAEAHFASF 55

Query: 662 IVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK-TGF 712
           + +  + Y + +E   R   F  +  +  +H+R      +G ++FSD +P+E   +  G 
Sbjct: 56  VQRFNKSYRDADEHAHRLSVFTANLRRARRHQRLDPSAVHGVTKFSDLTPDEFRDRFLGL 115

Query: 713 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 772
           +   R++ + ++        L     DG +P  +DWR+    GP  DQ +CGSCW+FS +
Sbjct: 116 RKYRRSFLKGLSGSAHDAPAL---PTDG-LPTEFDWREHGAVGPVKDQGSCGSCWSFSTS 171

Query: 773 GMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLE 822
           G LEG + + TGKL   S+ Q+V+C  +C         +GC+G     +  Y  +A GLE
Sbjct: 172 GALEGAHYLATGKLEVLSEQQMVDCDHECDPSEPRACDAGCNGGLMTTAFSYLAKAGGLE 231

Query: 823 SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDL 881
           +EKDYPY    G    C +DKSK+     K+F      E  +   L K+GPL++ +N+  
Sbjct: 232 TEKDYPYTGRGG---ACKFDKSKIAAQV-KNFSTVAVDEDQIAANLVKHGPLAIGINAVF 287

Query: 882 IHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIG 930
           +  Y G           P+     L H VLLVGYG            PYW+++NSWG   
Sbjct: 288 MQTYIGG-------VSCPFICGRHLDHGVLLVGYGSAGYAPLRFKEKPYWIIKNSWGENW 340

Query: 931 PDEGFFKIERG---NNACGIEQIAGYATIDVVKNDE 963
            + G++KI RG    N CG++ +    T     N E
Sbjct: 341 GESGYYKICRGAHVKNKCGVDSMVSTVTAIHTSNKE 376



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 187/387 (48%), Gaps = 55/387 (14%)

Query: 236 KKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAF 295
           ++  +++ AV LL GVA+ L  P + D + +QVV   +   +E        N    F +F
Sbjct: 5   RRLPIVVAAVLLLSGVAA-LSSP-VEDPLIEQVVGGDEKNELE-------LNAEAHFASF 55

Query: 296 IVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK-TGF 346
           + +  + Y + +E   R   F  +  +  +H+R      +G ++FSD +P+E   +  G 
Sbjct: 56  VQRFNKSYRDADEHAHRLSVFTANLRRARRHQRLDPSAVHGVTKFSDLTPDEFRDRFLGL 115

Query: 347 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 406
           +   R++ + ++        L     DG +P  +DWR+    GP  DQ +CGSCW+FS +
Sbjct: 116 RKYRRSFLKGLSGSAHDAPAL---PTDG-LPTEFDWREHGAVGPVKDQGSCGSCWSFSTS 171

Query: 407 GMLEGQYAIKTGKLVEFSKSQLVECAKQCS-----GC-GGCDGLEQPIEYTHQA---GLE 457
           G LEG + + TGKL   S+ Q+V+C  +C       C  GC+G      +++ A   GLE
Sbjct: 172 GALEGAHYLATGKLEVLSEQQMVDCDHECDPSEPRACDAGCNGGLMTTAFSYLAKAGGLE 231

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
           +EKDYPY    G    C +DKSK+              + +   L K+GPL++G+N+  +
Sbjct: 232 TEKDYPY---TGRGGACKFDKSKIAAQVKNFSTVAVDEDQIAANLVKHGPLAIGINAVFM 288

Query: 518 HFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DDIPYWLARNSWGPIGP 566
             Y G           P+     L H VLLVGYG          + PYW+ +NSWG    
Sbjct: 289 QTYIGG-------VSCPFICGRHLDHGVLLVGYGSAGYAPLRFKEKPYWIIKNSWGENWG 341

Query: 567 DEGFFKIERG---NNACGIEQIAGYAT 590
           + G++KI RG    N CG++ +    T
Sbjct: 342 ESGYYKICRGAHVKNKCGVDSMVSTVT 368



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 121/239 (50%), Gaps = 36/239 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+    GP  DQ  CGSCW+FS +G LEG + + TGKL   S+ Q+V+C  +C
Sbjct: 141 LPTEFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHYLATGKLEVLSEQQMVDCDHEC 200

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC+G     +  Y  +A GLE+EKDYPY    G    C +DKSK+     
Sbjct: 201 DPSEPRACDAGCNGGLMTTAFSYLAKAGGLETEKDYPYTGRGG---ACKFDKSKIAAQV- 256

Query: 121 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 175
           K+F      E  +   L K+GPL++ +N+  +  Y G           P+     L H V
Sbjct: 257 KNFSTVAVDEDQIAANLVKHGPLAIGINAVFMQTYIGG-------VSCPFICGRHLDHGV 309

Query: 176 LLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 224
           LLVGYG            PYW+++NSWG    + G++KI RG    N CG++ +    T
Sbjct: 310 LLVGYGSAGYAPLRFKEKPYWIIKNSWGENWGESGYYKICRGAHVKNKCGVDSMVSTVT 368



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 11/96 (11%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLV 990
            ++ G  A GI  +     I  V     C  + L H VLLVGYG          + PYW++
Sbjct: 274  VKHGPLAIGINAVFMQTYIGGVSCPFICGRH-LDHGVLLVGYGSAGYAPLRFKEKPYWII 332

Query: 991  RNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 1023
            +NSWG    + G++KI RG    N CG++ +    T
Sbjct: 333  KNSWGENWGESGYYKICRGAHVKNKCGVDSMVSTVT 368


>gi|335281454|ref|XP_003122543.2| PREDICTED: cathepsin F [Sus scrofa]
 gi|350579927|ref|XP_003480717.1| PREDICTED: cathepsin F-like [Sus scrofa]
          Length = 490

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 150/317 (47%), Gaps = 27/317 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F+    R Y   EE + R   F  +  +  +         RYG ++FSD + E
Sbjct: 189 MASIFKEFVTTYNRTYDTKEEARWRMSVFANNMVRAQKIQALDTGTARYGVTKFSDLTEE 248

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +   E   KM +        P  WDWRKK       DQ  CG
Sbjct: 249 EF---------RTIYLNPLLQEEPGRKMRLAKSVSSLPPPEWDWRKKGAVTKVKDQGMCG 299

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +K G L+  S+ +L++C K   GC G              GLE+
Sbjct: 300 SCWAFSVTGNVEGQWFLKQGTLLSLSEQELLDCDKVDKGCMGGLPSNAYSAIKTLGGLET 359

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E+DY YR   G    C+++  K K++           + +   L + GP+SV +N+  + 
Sbjct: 360 EEDYSYR---GHLQTCSFNAEKAKVYINDSVELSQNEQKLAAWLAEKGPISVAINAFGMQ 416

Query: 519 FYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
           FY      P+R     CSP+ + HAVLLVGYG +   P+W  +NSWG    +EG++ + R
Sbjct: 417 FYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSATPFWAIKNSWGTDWGEEGYYYLYR 473

Query: 576 GNNACGIEQIAGYATID 592
           G+ ACG+  +A  A ++
Sbjct: 474 GSGACGVNIMASSAVVN 490



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 154/319 (48%), Gaps = 32/319 (10%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F+    R Y   EE + R   F  +  +  +         RYG ++FSD + E
Sbjct: 189 MASIFKEFVTTYNRTYDTKEEARWRMSVFANNMVRAQKIQALDTGTARYGVTKFSDLTEE 248

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +   E   KM +        P  WDWRKK       DQ  CG
Sbjct: 249 EF---------RTIYLNPLLQEEPGRKMRLAKSVSSLPPPEWDWRKKGAVTKVKDQGMCG 299

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QAGL 821
           SCWAFS+ G +EGQ+ +K G L+  S+ +L++C K   GC G    PS  Y+      GL
Sbjct: 300 SCWAFSVTGNVEGQWFLKQGTLLSLSEQELLDCDKVDKGCMGGL--PSNAYSAIKTLGGL 357

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E+DY Y+   G    C+++  K K++           + +   L + GP+SV +N+  
Sbjct: 358 ETEEDYSYR---GHLQTCSFNAEKAKVYINDSVELSQNEQKLAAWLAEKGPISVAINAFG 414

Query: 882 IHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +  Y      P+R     CSP+ + HAVLLVGYG +   P+W ++NSWG    +EG++ +
Sbjct: 415 MQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSATPFWAIKNSWGTDWGEEGYYYL 471

Query: 939 ERGNNACGIEQIAGYATID 957
            RG+ ACG+  +A  A ++
Sbjct: 472 YRGSGACGVNIMASSAVVN 490



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 122/221 (55%), Gaps = 14/221 (6%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  WDWRKK       DQ  CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K   
Sbjct: 278 PPEWDWRKKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLKQGTLLSLSEQELLDCDKVDK 337

Query: 72  GCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
           GC G    PS  Y+      GLE+E+DY Y+   G    C+++  K K++          
Sbjct: 338 GCMGGL--PSNAYSAIKTLGGLETEEDYSYR---GHLQTCSFNAEKAKVYINDSVELSQN 392

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            + +   L + GP+SV +N+  +  Y      P+R     CSP+ + HAVLLVGYG +  
Sbjct: 393 EQKLAAWLAEKGPISVAINAFGMQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSA 449

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            P+W ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 450 TPFWAIKNSWGTDWGEEGYYYLYRGSGACGVNIMASSAVVN 490



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 42/61 (68%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +   P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 430  CSPWLIDHAVLLVGYGNRSATPFWAIKNSWGTDWGEEGYYYLYRGSGACGVNIMASSAVV 489

Query: 1025 D 1025
            +
Sbjct: 490  N 490


>gi|42407296|dbj|BAD10859.1| cysteine protease [Aster tripolium]
          Length = 363

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 170/350 (48%), Gaps = 44/350 (12%)

Query: 627 TDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDG 686
           +D +  QVV   D   IE     D E+    FK F  K GR Y  +EE + R   FK + 
Sbjct: 23  SDPLIRQVVQN-DETEIESDPLLDPEH---HFKLFKNKFGRTYDTEEEHEYRLTVFKSNL 78

Query: 687 H--KKHE------RYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVE 737
              K+H+      ++G ++FSD +P E   K  G K    +  ++ AD  K       + 
Sbjct: 79  RRAKRHQVLDPTAKHGVTKFSDLTPSEFRKKYLGLK----SKLKLPADANKAP-----IL 129

Query: 738 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 797
               +P  +DWR K    P  +Q +CGSCW+FS  G LEG + ++TG+LV  S+ QLV+C
Sbjct: 130 PTSNLPQDFDWRDKGAVTPVKNQGSCGSCWSFSTTGALEGSHFLQTGELVSLSEQQLVDC 189

Query: 798 AKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVK 847
             +C         SGC+G     + EY  +A GL+ E DYPY   +G    C +DKSK+ 
Sbjct: 190 DHECDPAEYNSCDSGCNGGLMNNAFEYILKAGGLQKEADYPYTGRDG---TCKFDKSKIA 246

Query: 848 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 907
                  +     + +   L   GPL++ +N+  +  Y G         CS   + H VL
Sbjct: 247 ASVANFSVVSTDEDQIAANLVTNGPLAIGINAAWMQTYIGQ--VSCPYICSKTKMDHGVL 304

Query: 908 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           LVGYG            PYW+++NSWG    ++G++K+  G NACG++ +
Sbjct: 305 LVGYGSAGYAPLRFKEKPYWIIKNSWGEDWGEDGYYKLCSGYNACGMDTM 354



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 172/350 (49%), Gaps = 43/350 (12%)

Query: 261 TDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDG 320
           +D +  QVV   D   IE     D E+    FK F  K GR Y  +EE + R   FK + 
Sbjct: 23  SDPLIRQVVQN-DETEIESDPLLDPEH---HFKLFKNKFGRTYDTEEEHEYRLTVFKSNL 78

Query: 321 H--KKHE------RYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVE 371
              K+H+      ++G ++FSD +P E   K  G K    +  ++ AD  K       + 
Sbjct: 79  RRAKRHQVLDPTAKHGVTKFSDLTPSEFRKKYLGLK----SKLKLPADANKAP-----IL 129

Query: 372 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 431
               +P  +DWR K    P  +Q +CGSCW+FS  G LEG + ++TG+LV  S+ QLV+C
Sbjct: 130 PTSNLPQDFDWRDKGAVTPVKNQGSCGSCWSFSTTGALEGSHFLQTGELVSLSEQQLVDC 189

Query: 432 AKQC-----SGC-GGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVK 482
             +C     + C  GC+G  +    EY  +A GL+ E DYPY   +G    C +DKSK+ 
Sbjct: 190 DHECDPAEYNSCDSGCNGGLMNNAFEYILKAGGLQKEADYPYTGRDG---TCKFDKSKIA 246

Query: 483 LFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVL 542
                  +     + +   L   GPL++G+N+  +  Y G         CS   + H VL
Sbjct: 247 ASVANFSVVSTDEDQIAANLVTNGPLAIGINAAWMQTYIGQ--VSCPYICSKTKMDHGVL 304

Query: 543 LVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           LVGYG          + PYW+ +NSWG    ++G++K+  G NACG++ +
Sbjct: 305 LVGYGSAGYAPLRFKEKPYWIIKNSWGEDWGEDGYYKLCSGYNACGMDTM 354



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 117/226 (51%), Gaps = 22/226 (9%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K    P  +Q  CGSCW+FS  G LEG + ++TG+LV  S+ QLV+C  +C
Sbjct: 134 LPQDFDWRDKGAVTPVKNQGSCGSCWSFSTTGALEGSHFLQTGELVSLSEQQLVDCDHEC 193

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  +A GL+ E DYPY   +G    C +DKSK+     
Sbjct: 194 DPAEYNSCDSGCNGGLMNNAFEYILKAGGLQKEADYPYTGRDG---TCKFDKSKIAASVA 250

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
              +     + +   L   GPL++ +N+  +  Y G         CS   + H VLLVGY
Sbjct: 251 NFSVVSTDEDQIAANLVTNGPLAIGINAAWMQTYIGQ--VSCPYICSKTKMDHGVLLVGY 308

Query: 181 GKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           G            PYW+++NSWG    ++G++K+  G NACG++ +
Sbjct: 309 GSAGYAPLRFKEKPYWIIKNSWGEDWGEDGYYKLCSGYNACGMDTM 354



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLV 990
            +  G  A GI        I  V     CS   + H VLLVGYG          + PYW++
Sbjct: 267  VTNGPLAIGINAAWMQTYIGQVSCPYICSKTKMDHGVLLVGYGSAGYAPLRFKEKPYWII 326

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    ++G++K+  G NACG++ +
Sbjct: 327  KNSWGEDWGEDGYYKLCSGYNACGMDTM 354


>gi|4972585|gb|AAD34707.1|AF071801_1 cysteine proteinase [Paragonimus westermani]
          Length = 229

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 89/218 (40%), Positives = 122/218 (55%), Gaps = 7/218 (3%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            P+  DWR+    GP  +Q +CGSCWAFS+AG +EGQ+ +KTG+LV  SK QLV+C    
Sbjct: 16  APERMDWREWGAVGPVENQGSCGSCWAFSVAGNVEGQWFLKTGQLVSLSKQQLVDCDVMD 75

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
            GCGG       +E     GLE + DYPY    G + +C  +K   KL    D L   G+
Sbjct: 76  YGCGGGWPTNAYMEIMRMGGLELQSDYPYV---GVQQQCYLNKE--KLLAKIDDLIVLGA 130

Query: 496 --ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIP 553
             E     L ++GPLS  LN+  + FY       + E CSP  L HAVL VGY  ++ +P
Sbjct: 131 YEEEHAAYLAEHGPLSSALNAGYLQFYQSGISHPSYEECSPASLNHAVLTVGYDTENGVP 190

Query: 554 YWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           YW+ +NSWG    + G+F++ RG+  CGI ++   A I
Sbjct: 191 YWIIKNSWGTGWGENGYFRLYRGDGTCGINRMITSAII 228



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/218 (39%), Positives = 122/218 (55%), Gaps = 8/218 (3%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            P+  DWR+    GP  +Q +CGSCWAFS+AG +EGQ+ +KTG+LV  SK QLV+C    
Sbjct: 16  APERMDWREWGAVGPVENQGSCGSCWAFSVAGNVEGQWFLKTGQLVSLSKQQLVDCDVMD 75

Query: 802 SGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
            GC G +     +E     GLE + DYPY    G + +C  +K K  L    D L   G+
Sbjct: 76  YGCGGGWPTNAYMEIMRMGGLELQSDYPYV---GVQQQCYLNKEK--LLAKIDDLIVLGA 130

Query: 861 --ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
             E     L ++GPLS  LN+  +  Y       + E CSP  L HAVL VGY  ++ +P
Sbjct: 131 YEEEHAAYLAEHGPLSSALNAGYLQFYQSGISHPSYEECSPASLNHAVLTVGYDTENGVP 190

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           YW+++NSWG    + G+F++ RG+  CGI ++   A I
Sbjct: 191 YWIIKNSWGTGWGENGYFRLYRGDGTCGINRMITSAII 228



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/218 (39%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P+  DWR+    GP  +Q  CGSCWAFS+AG +EGQ+ +KTG+LV  SK QLV+C    
Sbjct: 16  APERMDWREWGAVGPVENQGSCGSCWAFSVAGNVEGQWFLKTGQLVSLSKQQLVDCDVMD 75

Query: 71  SGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC G +     +E     GLE + DYPY    G + +C  +K K  L    D L   G+
Sbjct: 76  YGCGGGWPTNAYMEIMRMGGLELQSDYPYV---GVQQQCYLNKEK--LLAKIDDLIVLGA 130

Query: 130 --ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E     L ++GPLS  LN+  +  Y       + E CSP  L HAVL VGY  ++ +P
Sbjct: 131 YEEEHAAYLAEHGPLSSALNAGYLQFYQSGISHPSYEECSPASLNHAVLTVGYDTENGVP 190

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           YW+++NSWG    + G+F++ RG+  CGI ++   A I
Sbjct: 191 YWIIKNSWGTGWGENGYFRLYRGDGTCGINRMITSAII 228



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 41/62 (66%)

Query: 963  ETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 1022
            E CSP  L HAVL VGY  ++ +PYW+++NSWG    + G+F++ RG+  CGI ++   A
Sbjct: 167  EECSPASLNHAVLTVGYDTENGVPYWIIKNSWGTGWGENGYFRLYRGDGTCGINRMITSA 226

Query: 1023 TI 1024
             I
Sbjct: 227  II 228


>gi|343412462|emb|CCD21670.1| cysteine peptidase (CP), putative [Trypanosoma vivax Y486]
          Length = 367

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 153/312 (49%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 709
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGTCGSCWSF 146

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKD 826
           S  G +EGQ+A     L   S+  LV C  + +GC G   + + E+    +   + +EK 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKENSGKVYTEKS 206

Query: 827 YPYKNANGEKFKCAYDKSKV-KLFTGK-DFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           YPY +  GE+  C     KV    TG  D  H    + + K L   GP++V +++     
Sbjct: 207 YPYVSGGGEEPPCKPRGHKVGATITGHVDIPH--DEDAIAKYLADNGPVAVAVDATTFMS 264

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y+G  +     +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N 
Sbjct: 265 YSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQ 320

Query: 945 CGIEQIAGYATI 956
           C + Q+A  A +
Sbjct: 321 CLVAQLASSAVV 332



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 150/310 (48%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 343
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGTCGSCWSF 146

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKD 461
           S  G +EGQ+A     L   S+  LV C  + +GCGG   D   + I   +   + +EK 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKENSGKVYTEKS 206

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           YPY +G GE+  C     KV           +  + + K L   GP++V +++     Y+
Sbjct: 207 YPYVSGGGEEPPCKPRGHKVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATTFMSYS 266

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
           G  +     +C+   L H VLLVGY      PYW+ +NSW     ++G+ +IE+G N C 
Sbjct: 267 GGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCL 322

Query: 582 IEQIAGYATI 591
           + Q+A  A +
Sbjct: 323 VAQLASSAVV 332



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 113/222 (50%), Gaps = 11/222 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCW+FS  G +EGQ+A     L   S+  LV C  
Sbjct: 117 GKAPAAVDWRRKGAVTPVKDQGTCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDT 176

Query: 69  QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK-DF 123
           + +GC G   + + E+    +   + +EK YPY +  GE+  C     KV    TG  D 
Sbjct: 177 KDNGCGGGLMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDI 236

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            H    + + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY   
Sbjct: 237 PH--DEDAIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDS 290

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
              PYW+++NSW     ++G+ +IE+G N C + Q+A  A +
Sbjct: 291 SKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAVV 332



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N C + Q+A  A 
Sbjct: 272  SCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAV 331

Query: 1024 I 1024
            +
Sbjct: 332  V 332


>gi|242061538|ref|XP_002452058.1| hypothetical protein SORBIDRAFT_04g017830 [Sorghum bicolor]
 gi|241931889|gb|EES05034.1| hypothetical protein SORBIDRAFT_04g017830 [Sorghum bicolor]
          Length = 371

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/356 (32%), Positives = 176/356 (49%), Gaps = 64/356 (17%)

Query: 650 DNE---NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEF 698
           DNE   N    F +F+ + G+ Y + EE   R   FK +  +  +H+       +G ++F
Sbjct: 37  DNELELNAESHFLSFVQRFGKSYKDAEEHAYRLSIFKANLRRARRHQLLDPSAEHGVTKF 96

Query: 699 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKN 752
           SD +P E           RTY  +   R  + + L +   + PV      PD +DWR   
Sbjct: 97  SDLTPAEF---------RRTYLGLRKSRRALLRELGKSANEAPVLPTDGLPDDFDWRDHG 147

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SG 803
              P  +Q +CGSCW+FS +G LEG + + TGKL   S+ Q+V+C   C         SG
Sbjct: 148 AVTPVKNQGSCGSCWSFSTSGALEGAHYLATGKLEVLSEQQMVDCDHVCDTSEPDSCDSG 207

Query: 804 CDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE- 861
           C+G     +  Y  +A GLESEKDYPY    G   KC +DKSK+ + + ++F   +  E 
Sbjct: 208 CNGGLMTNAFSYLQKAGGLESEKDYPY---TGSDDKCKFDKSKI-VASVQNFSVVSVDEG 263

Query: 862 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG----- 912
            +   L K+GPL++ +N+  +  Y G           PY     L H VLLVGYG     
Sbjct: 264 QIAANLIKHGPLAIGINAAYMQTYIGG-------VSCPYICGRTLDHGVLLVGYGAAGFA 316

Query: 913 --KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQIAGYATIDVVKNDE 963
             +  + PYW+++NSWG    + G++KI RG+N    CG++ +   +T+  V+  +
Sbjct: 317 PIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMV--STVSAVRTSK 370



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 174/352 (49%), Gaps = 63/352 (17%)

Query: 284 DNE---NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEF 332
           DNE   N    F +F+ + G+ Y + EE   R   FK +  +  +H+       +G ++F
Sbjct: 37  DNELELNAESHFLSFVQRFGKSYKDAEEHAYRLSIFKANLRRARRHQLLDPSAEHGVTKF 96

Query: 333 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKN 386
           SD +P E           RTY  +   R  + + L +   + PV      PD +DWR   
Sbjct: 97  SDLTPAEF---------RRTYLGLRKSRRALLRELGKSANEAPVLPTDGLPDDFDWRDHG 147

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGG 440
              P  +Q +CGSCW+FS +G LEG + + TGKL   S+ Q+V+C   C      S   G
Sbjct: 148 AVTPVKNQGSCGSCWSFSTSGALEGAHYLATGKLEVLSEQQMVDCDHVCDTSEPDSCDSG 207

Query: 441 CDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE- 496
           C+G  +     Y  +A GLESEKDYPY    G   KC +DKSK+ + + ++F   +  E 
Sbjct: 208 CNGGLMTNAFSYLQKAGGLESEKDYPY---TGSDDKCKFDKSKI-VASVQNFSVVSVDEG 263

Query: 497 TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG----- 547
            +   L K+GPL++G+N+  +  Y G           PY     L H VLLVGYG     
Sbjct: 264 QIAANLIKHGPLAIGINAAYMQTYIGG-------VSCPYICGRTLDHGVLLVGYGAAGFA 316

Query: 548 --KQDDIPYWLARNSWGPIGPDEGFFKIERGNNA---CGIEQIAGYATIDVV 594
             +  D PYW+ +NSWG    + G++KI RG+N    CG++ +   +T+  V
Sbjct: 317 PIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMV--STVSAV 366



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 129/243 (53%), Gaps = 38/243 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR      P  +Q  CGSCW+FS +G LEG + + TGKL   S+ Q+V+C   C
Sbjct: 137 LPDDFDWRDHGAVTPVKNQGSCGSCWSFSTSGALEGAHYLATGKLEVLSEQQMVDCDHVC 196

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     +  Y  +A GLESEKDYPY    G   KC +DKSK+ + + 
Sbjct: 197 DTSEPDSCDSGCNGGLMTNAFSYLQKAGGLESEKDYPY---TGSDDKCKFDKSKI-VASV 252

Query: 121 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 175
           ++F   +  E  +   L K+GPL++ +N+  +  Y G           PY     L H V
Sbjct: 253 QNFSVVSVDEGQIAANLIKHGPLAIGINAAYMQTYIGG-------VSCPYICGRTLDHGV 305

Query: 176 LLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQIAGYATI 225
           LLVGYG       +  + PYW+++NSWG    + G++KI RG+N    CG++ +   +T+
Sbjct: 306 LLVGYGAAGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMV--STV 363

Query: 226 DVV 228
             V
Sbjct: 364 SAV 366



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 10/59 (16%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 1018
            L H VLLVGYG       +  D PYW+++NSWG    + G++KI RG+N    CG++ +
Sbjct: 301  LDHGVLLVGYGAAGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSM 359


>gi|9630063|ref|NP_046281.1| cathepsin [Orgyia pseudotsugata MNPV]
 gi|2499880|sp|O10364.1|CATV_NPVOP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|7435821|pir||T10394 cathepsin - Orgyia pseudotsugata nuclear polyhedrosis virus
 gi|1911371|gb|AAC59124.1| cathepsin [Orgyia pseudotsugata MNPV]
          Length = 324

 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 169/316 (53%), Gaps = 34/316 (10%)

Query: 648 TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFS 699
           T+D       F+ F+ K  + Y+++ E   RF+ F+        ++ +    +Y  ++FS
Sbjct: 18  TYDLLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFS 77

Query: 700 DRSPEEILCK-TGFKWSERTY---ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 755
           D S EE + K TG     +T    E ++ DR             GP+   +DWR+ N   
Sbjct: 78  DLSKEEAISKYTGLSLPHQTQNFCEVVILDRPP---------DRGPLE--FDWRQFNKVT 126

Query: 756 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY 815
              +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q ++C +  +GCDG     + E 
Sbjct: 127 SVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDRVNAGCDGGLLHTAFES 186

Query: 816 THQ-AGLESEKDYPYKNANGEKFKCAYDKSK--VKLFTGKDFLHFNGSETMKKILYKYGP 872
             +  G++ E DYPY+ ANG+   C  + ++  V + + + ++     E +K +L   GP
Sbjct: 187 AMEMGGVQMESDYPYETANGQ---CRINPNRFVVGVRSCRRYIVM-FEEKLKDLLRAVGP 242

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           + V +++  I +Y    +R+    C+ + L HAVLLVGY  ++NIPYW+++N+WG    +
Sbjct: 243 IPVAIDASDIVNYRRGIMRQ----CANHGLNHAVLLVGYAVENNIPYWILKNTWGTDWGE 298

Query: 933 EGFFKIERGNNACGIE 948
           +G+F++++  NACGI 
Sbjct: 299 DGYFRVQQNINACGIR 314



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 164/319 (51%), Gaps = 39/319 (12%)

Query: 282 TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFS 333
           T+D       F+ F+ K  + Y+++ E   RF+ F+        ++ +    +Y  ++FS
Sbjct: 18  TYDLLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFS 77

Query: 334 DRSPEEILCK-TGFKWSERTY---ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 389
           D S EE + K TG     +T    E ++ DR             GP+   +DWR+ N   
Sbjct: 78  DLSKEEAISKYTGLSLPHQTQNFCEVVILDRPP---------DRGPLE--FDWRQFNKVT 126

Query: 390 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG---CDGLEQ 446
              +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q ++C +  +GC G       E 
Sbjct: 127 SVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDRVNAGCDGGLLHTAFES 186

Query: 447 PIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSK--VKLFTGKDFLYFNGSETMKKILYK 504
            +E     G++ E DYPY   NG+   C  + ++  V + + + ++     E +K +L  
Sbjct: 187 AME---MGGVQMESDYPYETANGQ---CRINPNRFVVGVRSCRRYIVM-FEEKLKDLLRA 239

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPI 564
            GP+ V +++  I  Y    +R+    C+ + L HAVLLVGY  +++IPYW+ +N+WG  
Sbjct: 240 VGPIPVAIDASDIVNYRRGIMRQ----CANHGLNHAVLLVGYAVENNIPYWILKNTWGTD 295

Query: 565 GPDEGFFKIERGNNACGIE 583
             ++G+F++++  NACGI 
Sbjct: 296 WGEDGYFRVQQNINACGIR 314



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 124/209 (59%), Gaps = 11/209 (5%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q ++C +  +
Sbjct: 114 PLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDRVNA 173

Query: 72  GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSK--VKLFTGKDFLHFNG 128
           GCDG     + E   +  G++ E DYPY+ ANG+   C  + ++  V + + + ++    
Sbjct: 174 GCDGGLLHTAFESAMEMGGVQMESDYPYETANGQ---CRINPNRFVVGVRSCRRYIVM-F 229

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            E +K +L   GP+ V +++  I +Y    +R+    C+ + L HAVLLVGY  ++NIPY
Sbjct: 230 EEKLKDLLRAVGPIPVAIDASDIVNYRRGIMRQ----CANHGLNHAVLLVGYAVENNIPY 285

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIE 217
           W+++N+WG    ++G+F++++  NACGI 
Sbjct: 286 WILKNTWGTDWGEDGYFRVQQNINACGIR 314



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 40/52 (76%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            C+ + L HAVLLVGY  +++IPYW+++N+WG    ++G+F++++  NACGI 
Sbjct: 263  CANHGLNHAVLLVGYAVENNIPYWILKNTWGTDWGEDGYFRVQQNINACGIR 314


>gi|340053966|emb|CCC48259.1| cysteine peptidase precursor, fragment, partial [Trypanosoma vivax
           Y486]
          Length = 447

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 154/312 (49%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 709
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 26  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 83

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ +CGSCW+F
Sbjct: 84  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGSCGSCWSF 138

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKD 826
           S  G +EGQ+A     L   S+  LV C  + +GC G F + + E+    +   + +EK 
Sbjct: 139 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKENSGKVYTEKS 198

Query: 827 YPYKNANGEKFKC-AYDKSKVKLFTGK-DFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + +G K  C  Y        TG  D  H    + + K L   GP++V +++     
Sbjct: 199 YPYVSEDGSKPFCIPYGHEVGATITGHVDIPH--DEDAIAKYLADNGPVAVAVDATTFMS 256

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y+G  +     +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N 
Sbjct: 257 YSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQ 312

Query: 945 CGIEQIAGYATI 956
           C + Q+A  A +
Sbjct: 313 CLVAQLASSAVV 324



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 150/310 (48%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 343
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 26  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 83

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ +CGSCW+F
Sbjct: 84  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGSCGSCWSF 138

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKD 461
           S  G +EGQ+A     L   S+  LV C  + +GCGG   D   + I   +   + +EK 
Sbjct: 139 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKENSGKVYTEKS 198

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           YPY + +G K  C     +V           +  + + K L   GP++V +++     Y+
Sbjct: 199 YPYVSEDGSKPFCIPYGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATTFMSYS 258

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
           G  +     +C+   L H VLLVGY      PYW+ +NSW     ++G+ +IE+G N C 
Sbjct: 259 GGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCL 314

Query: 582 IEQIAGYATI 591
           + Q+A  A +
Sbjct: 315 VAQLASSAVV 324



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 113/222 (50%), Gaps = 11/222 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCW+FS  G +EGQ+A     L   S+  LV C  
Sbjct: 109 GKAPAAVDWRRKGAVTPVKDQGSCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDF 168

Query: 69  QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKC-AYDKSKVKLFTGK-DF 123
           + +GC G F + + E+    +   + +EK YPY + +G K  C  Y        TG  D 
Sbjct: 169 KDNGCGGGFMDNAFEWIVKENSGKVYTEKSYPYVSEDGSKPFCIPYGHEVGATITGHVDI 228

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            H    + + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY   
Sbjct: 229 PH--DEDAIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDS 282

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
              PYW+++NSW     ++G+ +IE+G N C + Q+A  A +
Sbjct: 283 SKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAVV 324



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N C + Q+A  A 
Sbjct: 264  SCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAV 323

Query: 1024 I 1024
            +
Sbjct: 324  V 324


>gi|34761156|gb|AAQ81938.1| cysteine proteinase precursor [Ipomoea batatas]
          Length = 371

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 174/380 (45%), Gaps = 53/380 (13%)

Query: 257 LPSL-TDRITDQVVARVDTLAIEGSLTFDNE-----NILETFKAFIVKRGRQYANDEEIK 310
           LPSL    +T   V R D   +   +  D E     N    F  F  K G+ YA  EE  
Sbjct: 6   LPSLLIHALTAACVVRADEDPLIRQVVSDGEDDALLNADHHFTLFKSKYGKSYATQEEHD 65

Query: 311 ERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERI------ 356
            R   FK +    K+H+       +G ++FSD +P+E           RTY  I      
Sbjct: 66  YRLSVFKANLRRAKRHQMLDPSAVHGVTKFSDLTPKEF---------RRTYLGIRKSSSS 116

Query: 357 ---VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQY 413
              +  +   +    E+     +P  ++WR         DQ  CGSCW+FS  G LEG  
Sbjct: 117 KQKLKLKLPADAHAAEILPTSDLPFDFEWRDYGAVTGVKDQGLCGSCWSFSTTGTLEGTN 176

Query: 414 AIKTGKLVEFSKSQLVECAKQCS-----GC-GGCDG--LEQPIEYTHQA-GLESEKDYPY 464
            + TG+L+  ++ +LV+C   C       C  GC+G  +    EY  Q+ GLE EKDYPY
Sbjct: 177 FLATGELLSLNEQELVDCDHLCDPKKAGACDAGCNGGLMTTAYEYVLQSGGLEKEKDYPY 236

Query: 465 RNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTP 524
              +G    C +DKSK+        +     + +   L K+GPLSVG+NS  +  Y G  
Sbjct: 237 TGRDG---TCKFDKSKIAAAVANFSVVSLDEDQIAANLVKHGPLSVGINSIFMQTYIGGV 293

Query: 525 IRKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
                  CS  +L H VL+VGYG       +  D PYW+ +NSWG    +EG++KI RGN
Sbjct: 294 --SCPYICSKKNLDHGVLIVGYGAAGYAPIRFKDKPYWIIKNSWGENWGEEGYYKICRGN 351

Query: 578 NACGIEQIAGYATIDVVIQR 597
           N CG++ +    T    I++
Sbjct: 352 NICGVDSMVSSVTAASTIKQ 371



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 171/373 (45%), Gaps = 54/373 (14%)

Query: 623 LPSL-TDRITDQVVARVDTLAIEGSLTFDNE-----NILETFKAFIVKRGRQYANDEEIK 676
           LPSL    +T   V R D   +   +  D E     N    F  F  K G+ YA  EE  
Sbjct: 6   LPSLLIHALTAACVVRADEDPLIRQVVSDGEDDALLNADHHFTLFKSKYGKSYATQEEHD 65

Query: 677 ERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERI------ 722
            R   FK +    K+H+       +G ++FSD +P+E           RTY  I      
Sbjct: 66  YRLSVFKANLRRAKRHQMLDPSAVHGVTKFSDLTPKEF---------RRTYLGIRKSSSS 116

Query: 723 ---VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQY 779
              +  +   +    E+     +P  ++WR         DQ  CGSCW+FS  G LEG  
Sbjct: 117 KQKLKLKLPADAHAAEILPTSDLPFDFEWRDYGAVTGVKDQGLCGSCWSFSTTGTLEGTN 176

Query: 780 AIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPY 829
            + TG+L+  ++ +LV+C   C         +GC+G     + EY  Q+ GLE EKDYPY
Sbjct: 177 FLATGELLSLNEQELVDCDHLCDPKKAGACDAGCNGGLMTTAYEYVLQSGGLEKEKDYPY 236

Query: 830 KNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTP 889
              +G    C +DKSK+        +     + +   L K+GPLSV +NS  +  Y G  
Sbjct: 237 TGRDG---TCKFDKSKIAAAVANFSVVSLDEDQIAANLVKHGPLSVGINSIFMQTYIGGV 293

Query: 890 IRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
                  CS  +L H VL+VGYG       +  + PYW+++NSWG    +EG++KI RGN
Sbjct: 294 --SCPYICSKKNLDHGVLIVGYGAAGYAPIRFKDKPYWIIKNSWGENWGEEGYYKICRGN 351

Query: 943 NACGIEQIAGYAT 955
           N CG++ +    T
Sbjct: 352 NICGVDSMVSSVT 364



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 125/245 (51%), Gaps = 22/245 (8%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           E+     +P  ++WR         DQ  CGSCW+FS  G LEG   + TG+L+  ++ +L
Sbjct: 132 EILPTSDLPFDFEWRDYGAVTGVKDQGLCGSCWSFSTTGTLEGTNFLATGELLSLNEQEL 191

Query: 64  VECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKS 113
           V+C   C         +GC+G     + EY  Q+ GLE EKDYPY   +G    C +DKS
Sbjct: 192 VDCDHLCDPKKAGACDAGCNGGLMTTAYEYVLQSGGLEKEKDYPYTGRDG---TCKFDKS 248

Query: 114 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 173
           K+        +     + +   L K+GPLSV +NS  +  Y G         CS  +L H
Sbjct: 249 KIAAAVANFSVVSLDEDQIAANLVKHGPLSVGINSIFMQTYIGGV--SCPYICSKKNLDH 306

Query: 174 AVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            VL+VGYG       +  + PYW+++NSWG    +EG++KI RGNN CG++ +    T  
Sbjct: 307 GVLIVGYGAAGYAPIRFKDKPYWIIKNSWGENWGEEGYYKICRGNNICGVDSMVSSVTAA 366

Query: 227 VVIQR 231
             I++
Sbjct: 367 STIKQ 371



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 7/93 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  + GI  I     I  V     CS  +L H VL+VGYG       +  D PYW++
Sbjct: 272  VKHGPLSVGINSIFMQTYIGGVSCPYICSKKNLDHGVLIVGYGAAGYAPIRFKDKPYWII 331

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +NSWG    +EG++KI RGNN CG++ +    T
Sbjct: 332  KNSWGENWGEEGYYKICRGNNICGVDSMVSSVT 364


>gi|324514421|gb|ADY45863.1| Viral cathepsin [Ascaris suum]
          Length = 399

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 183/360 (50%), Gaps = 23/360 (6%)

Query: 600 LEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDT-LAIEGSLTFDNENILETF 658
           L +K I +   +FLL G A+ L         +D     ++T LA  G L+ D    +++F
Sbjct: 42  LSRKGITISILLFLLVGCATMLIAREFLS--SDPSAGSLETILADMGELSNDYPIYIDSF 99

Query: 659 KAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKT 710
             F+ +  RQY++++E + RF  F ++    KK ++      +G + F+D S  E+   T
Sbjct: 100 VKFMQEYDRQYSSNDETRLRFRNFVRNMKFIKKAQKGRDNVVFGITRFTDWSEAEMKSMT 159

Query: 711 GFKWSERTY-ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
              W+       I  D ++ E      ++    PDA+DWR K+V     DQ  CGSCWAF
Sbjct: 160 CEDWAANEVGSEITLDDDQDES-----DEVFDRPDAFDWRTKSVVTDIKDQERCGSCWAF 214

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPY 829
           +  G++E   AI    L+  S+ +L++C    +GC G +   +  Y  + G+ SEKDYPY
Sbjct: 215 AAIGVVESMNAIAKNPLISLSEQELIDCDTDDNGCSGGYRPYAFRYVRRHGIVSEKDYPY 274

Query: 830 KNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNG 887
           K    E+ +CA + ++V + + K ++  N  + M   ++  GP+SV +N   +  H  +G
Sbjct: 275 KGK--EQSQCAANGTRVYIKSVK-YIGRN-EDAMADFVFYRGPISVGINVTKEFFHYRSG 330

Query: 888 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
               K ++        HAV +VGYG Q+   YWL++NSWG     +G+   +RG N CGI
Sbjct: 331 VFTPKKEDCEEDSQGSHAVAVVGYGSQNGEDYWLIKNSWGKKWGMDGYVLYKRGENCCGI 390



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 180/363 (49%), Gaps = 28/363 (7%)

Query: 234 LEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDT-LAIEGSLTFDNENILETF 292
           L +K I +   +FLL G A+ L         +D     ++T LA  G L+ D    +++F
Sbjct: 42  LSRKGITISILLFLLVGCATMLIAREFLS--SDPSAGSLETILADMGELSNDYPIYIDSF 99

Query: 293 KAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKT 344
             F+ +  RQY++++E + RF  F ++    KK ++      +G + F+D S  E+   T
Sbjct: 100 VKFMQEYDRQYSSNDETRLRFRNFVRNMKFIKKAQKGRDNVVFGITRFTDWSEAEMKSMT 159

Query: 345 GFKWSERTY-ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
              W+       I  D ++ E      ++    PDA+DWR K+V     DQ  CGSCWAF
Sbjct: 160 CEDWAANEVGSEITLDDDQDES-----DEVFDRPDAFDWRTKSVVTDIKDQERCGSCWAF 214

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ-PIEYTHQAGLESEKDY 462
           +  G++E   AI    L+  S+ +L++C    +GC G  G       Y  + G+ SEKDY
Sbjct: 215 AAIGVVESMNAIAKNPLISLSEQELIDCDTDDNGCSG--GYRPYAFRYVRRHGIVSEKDY 272

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN--SHLIHF 519
           PY+    E+ +CA + ++V +   K   Y   +E  M   ++  GP+SVG+N      H+
Sbjct: 273 PYK--GKEQSQCAANGTRVYI---KSVKYIGRNEDAMADFVFYRGPISVGINVTKEFFHY 327

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
            +G    K ++        HAV +VGYG Q+   YWL +NSWG     +G+   +RG N 
Sbjct: 328 RSGVFTPKKEDCEEDSQGSHAVAVVGYGSQNGEDYWLIKNSWGKKWGMDGYVLYKRGENC 387

Query: 580 CGI 582
           CGI
Sbjct: 388 CGI 390



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           PDA+DWR K+V     DQ  CGSCWAF+  G++E   AI    L+  S+ +L++C    +
Sbjct: 188 PDAFDWRTKSVVTDIKDQERCGSCWAFAAIGVVESMNAIAKNPLISLSEQELIDCDTDDN 247

Query: 72  GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           GC G +   +  Y  + G+ SEKDYPYK    E+ +CA + ++V + + K ++  N  + 
Sbjct: 248 GCSGGYRPYAFRYVRRHGIVSEKDYPYKGK--EQSQCAANGTRVYIKSVK-YIGRN-EDA 303

Query: 132 MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           M   ++  GP+SV +N   +  H  +G    K ++        HAV +VGYG Q+   YW
Sbjct: 304 MADFVFYRGPISVGINVTKEFFHYRSGVFTPKKEDCEEDSQGSHAVAVVGYGSQNGEDYW 363

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGI 216
           L++NSWG     +G+   +RG N CGI
Sbjct: 364 LIKNSWGKKWGMDGYVLYKRGENCCGI 390



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 29/44 (65%)

Query: 972  HAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            HAV +VGYG Q+   YWL++NSWG     +G+   +RG N CGI
Sbjct: 347  HAVAVVGYGSQNGEDYWLIKNSWGKKWGMDGYVLYKRGENCCGI 390


>gi|358255476|dbj|GAA57175.1| cathepsin L [Clonorchis sinensis]
          Length = 385

 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 170/348 (48%), Gaps = 35/348 (10%)

Query: 272 VDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHERY 327
           +D++ ++  +  D N  +   +K F+    R Y +  E + RF+ F  +     K + R+
Sbjct: 45  LDSMHMQDVIGVDWNFTLSSIWKHFMTTYKRNYIDPSEHERRFKIFANNFVRISKHNVRF 104

Query: 328 ---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG---- 374
                    G +EFSD+    I+    F+  E         R +  +  +   +DG    
Sbjct: 105 IQGQVSYTMGINEFSDKVIGLIIHTICFQTDEEL------KRLRCFRGSLNASRDGSKYI 158

Query: 375 ----PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 430
               P P   DWR K    P  +Q  CGSCWAFS  G +EGQ  + TG LV  S+ QLV+
Sbjct: 159 TIAAPPPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGAIEGQNFLATGNLVSLSEQQLVD 218

Query: 431 CAKQCSGCGGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNG--EKFKCAYD-KSKVKLF 484
           C+ +  G   C+G  ++   +Y   + G+++E  YPY +G        C ++ K  V   
Sbjct: 219 CSSE-YGNNACNGGLMDNAFKYVKDSNGIDTEASYPYVSGETGDANPTCRFNLKEAVVRV 277

Query: 485 TGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLV 544
           TG   L       +K+ +  YGP+SV +N+ L  F +      +D+ CS  DL H VLLV
Sbjct: 278 TGYIDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQCSSDDLDHGVLLV 337

Query: 545 GYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           GYG+++ IPYWL +NSWGP   + G+ KI R  NN CG+  +A Y  +
Sbjct: 338 GYGEENGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVASMASYPLM 385



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 171/349 (48%), Gaps = 38/349 (10%)

Query: 638 VDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHERY 693
           +D++ ++  +  D N  +   +K F+    R Y +  E + RF+ F  +     K + R+
Sbjct: 45  LDSMHMQDVIGVDWNFTLSSIWKHFMTTYKRNYIDPSEHERRFKIFANNFVRISKHNVRF 104

Query: 694 ---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG---- 740
                    G +EFSD+    I+    F+  E         R +  +  +   +DG    
Sbjct: 105 IQGQVSYTMGINEFSDKVIGLIIHTICFQTDEEL------KRLRCFRGSLNASRDGSKYI 158

Query: 741 ----PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 796
               P P   DWR K    P  +Q  CGSCWAFS  G +EGQ  + TG LV  S+ QLV+
Sbjct: 159 TIAAPPPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGAIEGQNFLATGNLVSLSEQQLVD 218

Query: 797 CAKQC--SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE----KFKCAYD-KSKVKL 848
           C+ +   + C+G   + + +Y   + G+++E  YPY   +GE       C ++ K  V  
Sbjct: 219 CSSEYGNNACNGGLMDNAFKYVKDSNGIDTEASYPY--VSGETGDANPTCRFNLKEAVVR 276

Query: 849 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 908
            TG   L       +K+ +  YGP+SV +N+ L    +      +D+ CS  DL H VLL
Sbjct: 277 VTGYIDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQCSSDDLDHGVLL 336

Query: 909 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           VGYG+++ IPYWL++NSWGP   + G+ KI R  NN CG+  +A Y  +
Sbjct: 337 VGYGEENGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVASMASYPLM 385



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 125/226 (55%), Gaps = 11/226 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
            P P   DWR K    P  +Q +CGSCWAFS  G +EGQ  + TG LV  S+ QLV+C+ 
Sbjct: 162 APPPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGAIEGQNFLATGNLVSLSEQQLVDCSS 221

Query: 69  QC--SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE----KFKCAYD-KSKVKLFTG 120
           +   + C+G   + + +Y   + G+++E  YPY   +GE       C ++ K  V   TG
Sbjct: 222 EYGNNACNGGLMDNAFKYVKDSNGIDTEASYPY--VSGETGDANPTCRFNLKEAVVRVTG 279

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
              L       +K+ +  YGP+SV +N+ L    +      +D+ CS  DL H VLLVGY
Sbjct: 280 YIDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQCSSDDLDHGVLLVGY 339

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           G+++ IPYWL++NSWGP   + G+ KI R  NN CG+  +A Y  +
Sbjct: 340 GEENGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVASMASYPLM 385



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V +D+ CS  DL H VLLVGYG+++ IPYWL++NSWGP   + G+ KI R  NN CG+  
Sbjct: 319  VYSDDQCSSDDLDHGVLLVGYGEENGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVAS 378

Query: 1018 IAGYATI 1024
            +A Y  +
Sbjct: 379  MASYPLM 385


>gi|22549430|ref|NP_689203.1| cath gene product [Mamestra configurata NPV-B]
 gi|215401259|ref|YP_002332563.1| cathepsin [Helicoverpa armigera multiple nucleopolyhedrovirus]
 gi|22476609|gb|AAM95015.1| putative cysteine proteinase [Mamestra configurata NPV-B]
 gi|198448759|gb|ACH88549.1| cathepsin [Helicoverpa armigera multiple nucleopolyhedrovirus]
 gi|390165231|gb|AFL64878.1| cathepsin [Mamestra brassicae MNPV]
 gi|401665635|gb|AFP95747.1| putative cysteine proteinase [Mamestra brassicae MNPV]
          Length = 341

 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 161/315 (51%), Gaps = 34/315 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 709
           F+ FI +  +QY++++E K R+  F+ +    + K+ R     Y  + F+D +  E++ +
Sbjct: 44  FEKFITQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEVVNR 103

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACG 764
            TG           +A  +        +  DGP     P  +DWR  N      DQ  CG
Sbjct: 104 HTG-----------LASGDTGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCG 152

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLES 823
           +CWAF+  G LE QYAIK  +L++ ++ QLV+C     GCDG     + E   H  G+E 
Sbjct: 153 ACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDFVDMGCDGGLIHTAYEQIMHIGGVEQ 212

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           E DYPYK     +  CA    K  +     + +   SE  ++ +L   GP+++ +++  +
Sbjct: 213 EYDYPYK---AVRLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDL 269

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
            DY G  I      C    L HAVLLVGYG ++N+PYW ++NSWGP   + G+ +I RG 
Sbjct: 270 TDYYGGVI----SFCENNGLNHAVLLVGYGVENNVPYWTIKNSWGPDYGENGYVRIRRGV 325

Query: 943 NACG-IEQIAGYATI 956
           N+CG I ++A  A I
Sbjct: 326 NSCGMINELASSAQI 340



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 157/316 (49%), Gaps = 35/316 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 343
           F+ FI +  +QY++++E K R+  F+ +    + K+ R     Y  + F+D +  E++ +
Sbjct: 44  FEKFITQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEVVNR 103

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACG 398
            TG           +A  +        +  DGP     P  +DWR  N      DQ  CG
Sbjct: 104 HTG-----------LASGDTGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCG 152

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           +CWAF+  G LE QYAIK  +L++ ++ QLV+C     GC G        +  H  G+E 
Sbjct: 153 ACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDFVDMGCDGGLIHTAYEQIMHIGGVEQ 212

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-HL 516
           E DYPY+     +  CA    K  +     + Y   SE  ++ +L   GP+++ +++  L
Sbjct: 213 EYDYPYK---AVRLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDL 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
             +Y G         C    L HAVLLVGYG ++++PYW  +NSWGP   + G+ +I RG
Sbjct: 270 TDYYGGVI-----SFCENNGLNHAVLLVGYGVENNVPYWTIKNSWGPDYGENGYVRIRRG 324

Query: 577 NNACG-IEQIAGYATI 591
            N+CG I ++A  A I
Sbjct: 325 VNSCGMINELASSAQI 340



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/225 (38%), Positives = 122/225 (54%), Gaps = 14/225 (6%)

Query: 8   DGP----VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           DGP     P  +DWR  N      DQ  CG+CWAF+  G LE QYAIK  +L++ ++ QL
Sbjct: 123 DGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQL 182

Query: 64  VECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           V+C     GCDG     + E   H  G+E E DYPYK     +  CA    K  +     
Sbjct: 183 VDCDFVDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYK---AVRLPCAVKPHKFAVGVRNC 239

Query: 123 FLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           + +   SE  ++ +L   GP+++ +++  + DY G  I      C    L HAVLLVGYG
Sbjct: 240 YRYVLLSEERLEDLLRHVGPIAIAVDAVDLTDYYGGVI----SFCENNGLNHAVLLVGYG 295

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
            ++N+PYW ++NSWGP   + G+ +I RG N+CG I ++A  A I
Sbjct: 296 VENNVPYWTIKNSWGPDYGENGYVRIRRGVNSCGMINELASSAQI 340



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYAT 1023
            C    L HAVLLVGYG ++++PYW ++NSWGP   + G+ +I RG N+CG I ++A  A 
Sbjct: 280  CENNGLNHAVLLVGYGVENNVPYWTIKNSWGPDYGENGYVRIRRGVNSCGMINELASSAQ 339

Query: 1024 I 1024
            I
Sbjct: 340  I 340


>gi|68304200|ref|YP_249668.1| VCATH [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973029|gb|AAY83995.1| VCATH [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 344

 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 182/375 (48%), Gaps = 53/375 (14%)

Query: 602 KKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAF 661
           KK I+    VF   G        +  D I D V A     A +  L ++ E   + F+ F
Sbjct: 2   KKIILFFVFVFASGG------FDNGVDAIIDYVTA-----APQFKLQYNLERAPQYFETF 50

Query: 662 IVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK-TGF 712
             K  + YA+D E   R++ FK        ++       Y  ++F+D +  E++ K TG 
Sbjct: 51  QTKYKKVYADDNERDYRYKIFKTNLEIINLKNQQNDSAVYNINKFADLTKNEVIAKFTGL 110

Query: 713 KWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                   R  A +   E +++    DGP     + +DWR+ N      DQ  CGSCWAF
Sbjct: 111 GI------RSPALKNSCEPVIV----DGPSKYTQETFDWRQFNKITSVKDQGFCGSCWAF 160

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYP 828
           S    LE QYAIK  + V+ S+ QLV+C     GC G     + E      GLE E+DYP
Sbjct: 161 STIAGLESQYAIKYNEHVDLSEQQLVDCDTIDMGCAGGLLHTAYEEIMAMGGLEYEEDYP 220

Query: 829 YKNANG------EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 882
           Y++  G      +KF+ + D     +   +D         +K +L++ GP++V +++  +
Sbjct: 221 YRSVQGPCRLQSDKFEVSVDNCYRYVLYSED--------KLKDVLHEMGPIAVAVDAVDL 272

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
            DY G  I     +C  Y L HAVLLVGYG ++ +P+W+++NSWG    + GF +++R  
Sbjct: 273 TDYYGGIIT----SCKNYGLNHAVLLVGYGIENGVPFWVLKNSWGSDYGENGFVRVKRNV 328

Query: 943 NACG-IEQIAGYATI 956
           N+CG I ++A  A I
Sbjct: 329 NSCGMINELAASARI 343



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 180/372 (48%), Gaps = 46/372 (12%)

Query: 236 KKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAF 295
           KK I+    VF   G        +  D I D V A     A +  L ++ E   + F+ F
Sbjct: 2   KKIILFFVFVFASGG------FDNGVDAIIDYVTA-----APQFKLQYNLERAPQYFETF 50

Query: 296 IVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK-TGF 346
             K  + YA+D E   R++ FK        ++       Y  ++F+D +  E++ K TG 
Sbjct: 51  QTKYKKVYADDNERDYRYKIFKTNLEIINLKNQQNDSAVYNINKFADLTKNEVIAKFTGL 110

Query: 347 KWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                   R  A +   E +++    DGP     + +DWR+ N      DQ  CGSCWAF
Sbjct: 111 GI------RSPALKNSCEPVIV----DGPSKYTQETFDWRQFNKITSVKDQGFCGSCWAF 160

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI--EYTHQAGLESEKD 461
           S    LE QYAIK  + V+ S+ QLV+C     GC G  GL      E     GLE E+D
Sbjct: 161 STIAGLESQYAIKYNEHVDLSEQQLVDCDTIDMGCAG--GLLHTAYEEIMAMGGLEYEED 218

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIHFY 520
           YPYR+  G    C     K ++     + Y   SE  +K +L++ GP++V +++  +  Y
Sbjct: 219 YPYRSVQG---PCRLQSDKFEVSVDNCYRYVLYSEDKLKDVLHEMGPIAVAVDAVDLTDY 275

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
            G  I     +C  Y L HAVLLVGYG ++ +P+W+ +NSWG    + GF +++R  N+C
Sbjct: 276 YGGIIT----SCKNYGLNHAVLLVGYGIENGVPFWVLKNSWGSDYGENGFVRVKRNVNSC 331

Query: 581 G-IEQIAGYATI 591
           G I ++A  A I
Sbjct: 332 GMINELAASARI 343



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 125/229 (54%), Gaps = 23/229 (10%)

Query: 8   DGP---VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           DGP     + +DWR+ N      DQ  CGSCWAFS    LE QYAIK  + V+ S+ QLV
Sbjct: 127 DGPSKYTQETFDWRQFNKITSVKDQGFCGSCWAFSTIAGLESQYAIKYNEHVDLSEQQLV 186

Query: 65  ECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANG------EKFKCAYDKSKVKL 117
           +C     GC G     + E      GLE E+DYPY++  G      +KF+ + D     +
Sbjct: 187 DCDTIDMGCAGGLLHTAYEEIMAMGGLEYEEDYPYRSVQGPCRLQSDKFEVSVDNCYRYV 246

Query: 118 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
              +D         +K +L++ GP++V +++  + DY G  I     +C  Y L HAVLL
Sbjct: 247 LYSED--------KLKDVLHEMGPIAVAVDAVDLTDYYGGIIT----SCKNYGLNHAVLL 294

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
           VGYG ++ +P+W+++NSWG    + GF +++R  N+CG I ++A  A I
Sbjct: 295 VGYGIENGVPFWVLKNSWGSDYGENGFVRVKRNVNSCGMINELAASARI 343



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYA 1022
            +C  Y L HAVLLVGYG ++ +P+W+++NSWG    + GF +++R  N+CG I ++A  A
Sbjct: 282  SCKNYGLNHAVLLVGYGIENGVPFWVLKNSWGSDYGENGFVRVKRNVNSCGMINELAASA 341

Query: 1023 TI 1024
             I
Sbjct: 342  RI 343


>gi|41019551|tpe|CAD66657.1| TPA: putative cysteine proteinase precursor [Hordeum vulgare subsp.
           vulgare]
 gi|326489967|dbj|BAJ94057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326525847|dbj|BAJ93100.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 377

 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 166/347 (47%), Gaps = 58/347 (16%)

Query: 643 IEGSLTFDNENILET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RY 693
           + G+   DN+  L++ F  F+ + G+ Y + EE   R   FK +  +  +H+       +
Sbjct: 37  VGGADPLDNDLELDSQFVGFVQRFGKTYRDAEEHAHRLSVFKANLRRARRHQLLDPSAEH 96

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWD 747
           G ++FSD +P E           RTY  +   R    + +     D PV      P+ +D
Sbjct: 97  GVTKFSDLTPAEF---------RRTYLGLKTTRRSFLREMAGSAHDAPVLPTDGLPEDFD 147

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------ 801
           WR     GP  +Q +CGSCW+FS +G LEG   + +GK+   S+ QLV+C  +C      
Sbjct: 148 WRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLASGKMEVLSEQQLVDCDHECDPSEPD 207

Query: 802 ---SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
              +GC+G     +  Y  ++ GLE EKDYPY   +G    C +DKSK+        +  
Sbjct: 208 SCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKDG---TCKFDKSKIAASVQNYSVVA 264

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGK 913
              E +   L KYGPL++ +N+  +  Y G           PY     L H VLLVGYG 
Sbjct: 265 VDEEQIAANLVKYGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVLLVGYGA 317

Query: 914 Q-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 950
                      PYW+++NSWG    D+G++KI RG+N    CG++ +
Sbjct: 318 SGFAPSRFKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKCGVDSM 364



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 166/347 (47%), Gaps = 57/347 (16%)

Query: 277 IEGSLTFDNENILET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RY 327
           + G+   DN+  L++ F  F+ + G+ Y + EE   R   FK +  +  +H+       +
Sbjct: 37  VGGADPLDNDLELDSQFVGFVQRFGKTYRDAEEHAHRLSVFKANLRRARRHQLLDPSAEH 96

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWD 381
           G ++FSD +P E           RTY  +   R    + +     D PV      P+ +D
Sbjct: 97  GVTKFSDLTPAEF---------RRTYLGLKTTRRSFLREMAGSAHDAPVLPTDGLPEDFD 147

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------ 435
           WR     GP  +Q +CGSCW+FS +G LEG   + +GK+   S+ QLV+C  +C      
Sbjct: 148 WRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLASGKMEVLSEQQLVDCDHECDPSEPD 207

Query: 436 SGCGGCDGLEQPIEYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
           S   GC+G      +++     GLE EKDYPY   +G    C +DKSK+        +  
Sbjct: 208 SCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKDG---TCKFDKSKIAASVQNYSVVA 264

Query: 493 NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGK 548
              E +   L KYGPL++G+N+  +  Y G           PY     L H VLLVGYG 
Sbjct: 265 VDEEQIAANLVKYGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVLLVGYGA 317

Query: 549 Q-------DDIPYWLARNSWGPIGPDEGFFKIERGNNA---CGIEQI 585
                    + PYW+ +NSWG    D+G++KI RG+N    CG++ +
Sbjct: 318 SGFAPSRFKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKCGVDSM 364



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 119/233 (51%), Gaps = 34/233 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR     GP  +Q  CGSCW+FS +G LEG   + +GK+   S+ QLV+C  +C
Sbjct: 142 LPEDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLASGKMEVLSEQQLVDCDHEC 201

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC+G     +  Y  ++ GLE EKDYPY   +G    C +DKSK+     
Sbjct: 202 DPSEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKDG---TCKFDKSKIAASVQ 258

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L KYGPL++ +N+  +  Y G           PY     L H VL
Sbjct: 259 NYSVVAVDEEQIAANLVKYGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVL 311

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 219
           LVGYG            PYW+++NSWG    D+G++KI RG+N    CG++ +
Sbjct: 312 LVGYGASGFAPSRFKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKCGVDSM 364



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 10/59 (16%)

Query: 970  LGHAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 1018
            L H VLLVGYG          + PYW+++NSWG    D+G++KI RG+N    CG++ +
Sbjct: 306  LDHGVLLVGYGASGFAPSRFKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKCGVDSM 364


>gi|116242316|gb|ABJ89815.1| putative cathepsin L preprotein [Clonorchis sinensis]
          Length = 371

 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 160/322 (49%), Gaps = 26/322 (8%)

Query: 651 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEF 698
           N  +   ++AF+ K  R Y +  E + R   F ++  +  E              G + F
Sbjct: 60  NSILNSMWQAFLEKYKRVYDSKLEEERRLGIFTENFIRISEHNLLFEKGEVSYSMGINAF 119

Query: 699 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 758
           SD++  E+    GF+ S +      A R   +     +  D   P   DWR K    P  
Sbjct: 120 SDKTNSELDVLRGFRHSSK------ASRSGSQY----IPFDAAPPAEVDWRTKGAVTPVK 169

Query: 759 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ 818
           +Q  CGSCWAFS  G +EGQ+ + TGKLV  S+ QLV+C+    GCDG   + + EY  +
Sbjct: 170 NQGDCGSCWAFSATGGIEGQHYLATGKLVSLSEQQLVDCSSSNDGCDGGLMDLAFEYVKE 229

Query: 819 -AGLESEKDYPYKNAN-GEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSV 875
             G+++E  YPY + N G   +C++D     +  TG   +       +++ +  +GP+SV
Sbjct: 230 HKGIDTEVHYPYVSGNTGYARQCSFDPKYAAVNVTGYVDIPEGQELLLQQAVGFHGPISV 289

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
            +N+ L           +D  C+P+DL H VL+VGYG  + +PYWL++NSWG    + G+
Sbjct: 290 GINAGLPSFMAYESGIYSDHRCNPHDLDHGVLVVGYGVDNGVPYWLIKNSWGEDWGENGY 349

Query: 936 FKIERG-NNACGIEQIAGYATI 956
            +I R  NN CG+  +A Y  +
Sbjct: 350 VRILRNHNNLCGVATMASYPLM 371



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 160/323 (49%), Gaps = 27/323 (8%)

Query: 285 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEF 332
           N  +   ++AF+ K  R Y +  E + R   F ++  +  E              G + F
Sbjct: 60  NSILNSMWQAFLEKYKRVYDSKLEEERRLGIFTENFIRISEHNLLFEKGEVSYSMGINAF 119

Query: 333 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 392
           SD++  E+    GF+ S +      A R   +     +  D   P   DWR K    P  
Sbjct: 120 SDKTNSELDVLRGFRHSSK------ASRSGSQY----IPFDAAPPAEVDWRTKGAVTPVK 169

Query: 393 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH 452
           +Q  CGSCWAFS  G +EGQ+ + TGKLV  S+ QLV+C+    GC G   ++   EY  
Sbjct: 170 NQGDCGSCWAFSATGGIEGQHYLATGKLVSLSEQQLVDCSSSNDGCDG-GLMDLAFEYVK 228

Query: 453 Q-AGLESEKDYPYRNGN-GEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLS 509
           +  G+++E  YPY +GN G   +C++D     +          G E  +++ +  +GP+S
Sbjct: 229 EHKGIDTEVHYPYVSGNTGYARQCSFDPKYAAVNVTGYVDIPEGQELLLQQAVGFHGPIS 288

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEG 569
           VG+N+ L  F        +D  C+P+DL H VL+VGYG  + +PYWL +NSWG    + G
Sbjct: 289 VGINAGLPSFMAYESGIYSDHRCNPHDLDHGVLVVGYGVDNGVPYWLIKNSWGEDWGENG 348

Query: 570 FFKIERG-NNACGIEQIAGYATI 591
           + +I R  NN CG+  +A Y  +
Sbjct: 349 YVRILRNHNNLCGVATMASYPLM 371



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 124/222 (55%), Gaps = 4/222 (1%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D   P   DWR K    P  +Q DCGSCWAFS  G +EGQ+ + TGKLV  S+ QLV+C+
Sbjct: 150 DAAPPAEVDWRTKGAVTPVKNQGDCGSCWAFSATGGIEGQHYLATGKLVSLSEQQLVDCS 209

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNAN-GEKFKCAYDKSKVKL-FTGKDFL 124
               GCDG   + + EY  +  G+++E  YPY + N G   +C++D     +  TG   +
Sbjct: 210 SSNDGCDGGLMDLAFEYVKEHKGIDTEVHYPYVSGNTGYARQCSFDPKYAAVNVTGYVDI 269

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
                  +++ +  +GP+SV +N+ L           +D  C+P+DL H VL+VGYG  +
Sbjct: 270 PEGQELLLQQAVGFHGPISVGINAGLPSFMAYESGIYSDHRCNPHDLDHGVLVVGYGVDN 329

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            +PYWL++NSWG    + G+ +I R  NN CG+  +A Y  +
Sbjct: 330 GVPYWLIKNSWGEDWGENGYVRILRNHNNLCGVATMASYPLM 371



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            + +D  C+P+DL H VL+VGYG  + +PYWL++NSWG    + G+ +I R  NN CG+  
Sbjct: 305  IYSDHRCNPHDLDHGVLVVGYGVDNGVPYWLIKNSWGEDWGENGYVRILRNHNNLCGVAT 364

Query: 1018 IAGYATI 1024
            +A Y  +
Sbjct: 365  MASYPLM 371


>gi|291385469|ref|XP_002709277.1| PREDICTED: cathepsin F [Oryctolagus cuniculus]
          Length = 460

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 159/349 (45%), Gaps = 24/349 (6%)

Query: 256 CLPSLTDRITDQVVARVDTLAI--EGSLTFD-NENILETFKAFIVKRGRQYANDEEIKER 312
           C P  T R  D+      TL      SL  D +  +   FK F+    R Y + EE + R
Sbjct: 124 CGPVDTRRTEDRNETLKSTLPALNRDSLPQDFSVKMASIFKKFVRTYNRTYESKEEAQWR 183

Query: 313 FEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 363
              F  +  +  +         +YG ++FSD + EE             Y   +   E  
Sbjct: 184 LSVFASNMVRAQKIQSLDRGTAQYGITKFSDLTEEEF---------RTIYLNPLLRSEPG 234

Query: 364 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 423
           +KM +    + P P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +K G L+  
Sbjct: 235 KKMQLAKPVEDPAPPQWDWRSKGAVTNVKDQGMCGSCWAFSVTGNVEGQWFLKRGTLLSL 294

Query: 424 SKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKL 483
           S+ +L++C K    C G           +  GLE+E+DY Y+   G    C +   K K+
Sbjct: 295 SEQELLDCDKLDKACLGGLPSNAYSAIKNLGGLETEEDYTYQ---GHMQACNFSAQKAKV 351

Query: 484 FTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLL 543
           +           + +   L K GP+SV +N+  + FY           CSP+ + HAVLL
Sbjct: 352 YINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRRGIAHPLRPLCSPWLIDHAVLL 411

Query: 544 VGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           VGYG +   P+W  +NSWG    +EG++ + RG+  CG+  +A  A +D
Sbjct: 412 VGYGNRSATPFWAIKNSWGADWGEEGYYYLYRGSGVCGVNTMASSAVVD 460



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 163/351 (46%), Gaps = 29/351 (8%)

Query: 622 CLPSLTDRITDQVVARVDTLAI--EGSLTFD-NENILETFKAFIVKRGRQYANDEEIKER 678
           C P  T R  D+      TL      SL  D +  +   FK F+    R Y + EE + R
Sbjct: 124 CGPVDTRRTEDRNETLKSTLPALNRDSLPQDFSVKMASIFKKFVRTYNRTYESKEEAQWR 183

Query: 679 FEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 729
              F  +  +  +         +YG ++FSD + EE             Y   +   E  
Sbjct: 184 LSVFASNMVRAQKIQSLDRGTAQYGITKFSDLTEEEF---------RTIYLNPLLRSEPG 234

Query: 730 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 789
           +KM +    + P P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +K G L+  
Sbjct: 235 KKMQLAKPVEDPAPPQWDWRSKGAVTNVKDQGMCGSCWAFSVTGNVEGQWFLKRGTLLSL 294

Query: 790 SKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKV 846
           S+ +L++C K    C G    PS  Y+   +  GLE+E+DY Y+   G    C +   K 
Sbjct: 295 SEQELLDCDKLDKACLGGL--PSNAYSAIKNLGGLETEEDYTYQ---GHMQACNFSAQKA 349

Query: 847 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 906
           K++           + +   L K GP+SV +N+  +  Y           CSP+ + HAV
Sbjct: 350 KVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRRGIAHPLRPLCSPWLIDHAV 409

Query: 907 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           LLVGYG +   P+W ++NSWG    +EG++ + RG+  CG+  +A  A +D
Sbjct: 410 LLVGYGNRSATPFWAIKNSWGADWGEEGYYYLYRGSGVCGVNTMASSAVVD 460



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 119/229 (51%), Gaps = 8/229 (3%)

Query: 1   MLMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
           M +    + P P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +K G L+  S+
Sbjct: 237 MQLAKPVEDPAPPQWDWRSKGAVTNVKDQGMCGSCWAFSVTGNVEGQWFLKRGTLLSLSE 296

Query: 61  SQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL 117
            +L++C K    C G    PS  Y+   +  GLE+E+DY Y+   G    C +   K K+
Sbjct: 297 QELLDCDKLDKACLGGL--PSNAYSAIKNLGGLETEEDYTYQ---GHMQACNFSAQKAKV 351

Query: 118 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
           +           + +   L K GP+SV +N+  +  Y           CSP+ + HAVLL
Sbjct: 352 YINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRRGIAHPLRPLCSPWLIDHAVLL 411

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           VGYG +   P+W ++NSWG    +EG++ + RG+  CG+  +A  A +D
Sbjct: 412 VGYGNRSATPFWAIKNSWGADWGEEGYYYLYRGSGVCGVNTMASSAVVD 460



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 41/61 (67%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +   P+W ++NSWG    +EG++ + RG+  CG+  +A  A +
Sbjct: 400  CSPWLIDHAVLLVGYGNRSATPFWAIKNSWGADWGEEGYYYLYRGSGVCGVNTMASSAVV 459

Query: 1025 D 1025
            D
Sbjct: 460  D 460


>gi|171854651|dbj|BAG16515.1| putative cysteine proteinase [Capsicum chinense]
          Length = 367

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 166/345 (48%), Gaps = 51/345 (14%)

Query: 650 DNENIL----ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSE 697
           DN N L      F  F  K G+ YA  EE   R + FK +  +  +H+       +G ++
Sbjct: 38  DNNNHLLNAEHHFSLFKSKFGKIYATQEEHDHRLKVFKANLRRARRHQLLDPTAEHGITK 97

Query: 698 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 757
           FSD +P E           RTY  +   + K+      +     +P+ +DWR+K      
Sbjct: 98  FSDLTPSEF---------RRTYLGLHKPKPKLSTTKAPILPTSDLPEDFDWREKGAVTGV 148

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCF 808
            +Q +CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C         +GC G  
Sbjct: 149 KNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHECDAEQKSECDAGCGGGL 208

Query: 809 FEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 867
              + EYT +A GL+ EKDYPY   NG+   C +DKSK+        +     + +   L
Sbjct: 209 MTTAFEYTLKAGGLQREKDYPYTGRNGQ---CHFDKSKIAASVTNYSVVGLDEDQIAANL 265

Query: 868 YKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYG-------KQDNI 917
            K+GPL+V +NS  +  Y G    P+      C  +   H VLLVGYG       +    
Sbjct: 266 VKHGPLAVGINSAWMQTYIGGVSCPL-----VCFKHQ-DHGVLLVGYGSAGFAPIRLKAK 319

Query: 918 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVVKN 961
           PYW+++NSWG    + G++KI RG +N CG++ +    T     N
Sbjct: 320 PYWIIKNSWGEHWGEHGYYKICRGQHNICGVDAMVSTVTAAHTTN 364



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 166/340 (48%), Gaps = 52/340 (15%)

Query: 284 DNENIL----ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSE 331
           DN N L      F  F  K G+ YA  EE   R + FK +  +  +H+       +G ++
Sbjct: 38  DNNNHLLNAEHHFSLFKSKFGKIYATQEEHDHRLKVFKANLRRARRHQLLDPTAEHGITK 97

Query: 332 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 391
           FSD +P E           RTY  +   + K+      +     +P+ +DWR+K      
Sbjct: 98  FSDLTPSEF---------RRTYLGLHKPKPKLSTTKAPILPTSDLPEDFDWREKGAVTGV 148

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCGGCD 442
            +Q +CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C         +GCGG  
Sbjct: 149 KNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHECDAEQKSECDAGCGG-G 207

Query: 443 GLEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKI 501
            +    EYT +A GL+ EKDYPY   NG+   C +DKSK+        +     + +   
Sbjct: 208 LMTTAFEYTLKAGGLQREKDYPYTGRNGQ---CHFDKSKIAASVTNYSVVGLDEDQIAAN 264

Query: 502 LYKYGPLSVGLNSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYG-------KQDD 551
           L K+GPL+VG+NS  +  Y G    P+      C  +   H VLLVGYG       +   
Sbjct: 265 LVKHGPLAVGINSAWMQTYIGGVSCPL-----VCFKHQ-DHGVLLVGYGSAGFAPIRLKA 318

Query: 552 IPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 590
            PYW+ +NSWG    + G++KI RG +N CG++ +    T
Sbjct: 319 KPYWIIKNSWGEHWGEHGYYKICRGQHNICGVDAMVSTVT 358



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/235 (35%), Positives = 124/235 (52%), Gaps = 30/235 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K       +Q  CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C
Sbjct: 133 LPEDFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHEC 192

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC G     + EYT +A GL+ EKDYPY   NG+   C +DKSK+     
Sbjct: 193 DAEQKSECDAGCGGGLMTTAFEYTLKAGGLQREKDYPYTGRNGQ---CHFDKSKIAASVT 249

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLL 177
              +     + +   L K+GPL+V +NS  +  Y G    P+      C  +   H VLL
Sbjct: 250 NYSVVGLDEDQIAANLVKHGPLAVGINSAWMQTYIGGVSCPL-----VCFKHQ-DHGVLL 303

Query: 178 VGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 224
           VGYG       +    PYW+++NSWG    + G++KI RG +N CG++ +    T
Sbjct: 304 VGYGSAGFAPIRLKAKPYWIIKNSWGEHWGEHGYYKICRGQHNICGVDAMVSTVT 358



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 972  HAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            H VLLVGYG       +    PYW+++NSWG    + G++KI RG +N CG++ +    T
Sbjct: 299  HGVLLVGYGSAGFAPIRLKAKPYWIIKNSWGEHWGEHGYYKICRGQHNICGVDAMVSTVT 358


>gi|19849|emb|CAA78361.1| tobacco pre-pro-cysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 183/389 (47%), Gaps = 64/389 (16%)

Query: 608 IQAVFLLCGVASCLCLPSLT----DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 663
           ++ +FLL  +A  L   ++     D +  QVV+  D      S   + E+    FK+   
Sbjct: 1   MERLFLLSLLAFVLFSSAIAFSDEDPLIRQVVSETDD-----SHLLNAEHHFSLFKS--- 52

Query: 664 KRGRQYANDEEIKERFEYFKQDGHKKH--------ERYGTSEFSDRSPEEILCKTGFKWS 715
           K G+ YA++EE   RF+ FK +  +            +G ++FSD +P E          
Sbjct: 53  KFGKIYASEEEHDHRFKVFKANLRRARLNQLLDPSAEHGITKFSDLTPSEF--------- 103

Query: 716 ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGML 775
            RTY  +   + K+      +     +P  +DWR         +Q +CGSCW+FS  G +
Sbjct: 104 RRTYLGLHKPKPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAV 163

Query: 776 EGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEK 825
           EG + + TG+LV  S+ QLV+C  +C         +GC G  +  + EYT +A GL+ EK
Sbjct: 164 EGAHFLATGELVSLSEQQLVDCDHECDPEQQDACDAGCGGGHYATAFEYTLKAGGLQLEK 223

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DYPY   +G   KC +DKSK+        +     + +   L K+GPL+V +N+  +  Y
Sbjct: 224 DYPYTGKDG---KCHFDKSKICAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTY 280

Query: 886 NG---TPI---RKNDETCSPYDLGHAVLLVGYGKQDNIP-------YWLVRNSWGPIGPD 932
            G    P+   ++ D         H VLLVGYG     P       YW+++NSWG    +
Sbjct: 281 VGGVSCPLICFKRQD---------HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGE 331

Query: 933 EGFFKIERGNNACGIEQIAGYATIDVVKN 961
            G++KI RG+N CG++ +    T     N
Sbjct: 332 HGYYKICRGHNICGVDAMVSTVTAAHTTN 360



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 181/384 (47%), Gaps = 65/384 (16%)

Query: 242 IQAVFLLCGVASCLCLPSLT----DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 297
           ++ +FLL  +A  L   ++     D +  QVV+  D      S   + E+    FK+   
Sbjct: 1   MERLFLLSLLAFVLFSSAIAFSDEDPLIRQVVSETDD-----SHLLNAEHHFSLFKS--- 52

Query: 298 KRGRQYANDEEIKERFEYFKQDGHKKH--------ERYGTSEFSDRSPEEILCKTGFKWS 349
           K G+ YA++EE   RF+ FK +  +            +G ++FSD +P E          
Sbjct: 53  KFGKIYASEEEHDHRFKVFKANLRRARLNQLLDPSAEHGITKFSDLTPSEF--------- 103

Query: 350 ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGML 409
            RTY  +   + K+      +     +P  +DWR         +Q +CGSCW+FS  G +
Sbjct: 104 RRTYLGLHKPKPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAV 163

Query: 410 EGQYAIKTGKLVEFSKSQLVECAKQC---------SGCGGCDGLEQPIEYTHQA-GLESE 459
           EG + + TG+LV  S+ QLV+C  +C         +GCGG        EYT +A GL+ E
Sbjct: 164 EGAHFLATGELVSLSEQQLVDCDHECDPEQQDACDAGCGG-GHYATAFEYTLKAGGLQLE 222

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
           KDYPY   +G   KC +DKSK+        +     + +   L K+GPL+VG+N+  +  
Sbjct: 223 KDYPYTGKDG---KCHFDKSKICAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQT 279

Query: 520 YNG---TPI---RKNDETCSPYDLGHAVLLVGYGKQDDIP-------YWLARNSWGPIGP 566
           Y G    P+   ++ D         H VLLVGYG     P       YW+ +NSWG    
Sbjct: 280 YVGGVSCPLICFKRQD---------HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWG 330

Query: 567 DEGFFKIERGNNACGIEQIAGYAT 590
           + G++KI RG+N CG++ +    T
Sbjct: 331 EHGYYKICRGHNICGVDAMVSTVT 354



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 122/237 (51%), Gaps = 35/237 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         +Q  CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C
Sbjct: 130 LPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHEC 189

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC G  +  + EYT +A GL+ EKDYPY   +G   KC +DKSK+     
Sbjct: 190 DPEQQDACDAGCGGGHYATAFEYTLKAGGLQLEKDYPYTGKDG---KCHFDKSKICAAVT 246

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKNDETCSPYDLGHA 174
              +     + +   L K+GPL+V +N+  +  Y G    P+   ++ D         H 
Sbjct: 247 NFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD---------HG 297

Query: 175 VLLVGYGKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 298 VLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 354



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 7/59 (11%)

Query: 972  HAVLLVGYGKQDDIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            H VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 296  HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 354


>gi|224077886|ref|XP_002305451.1| predicted protein [Populus trichocarpa]
 gi|222848415|gb|EEE85962.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 162/333 (48%), Gaps = 49/333 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           F  F  K  + Y + EE   RF  FK +  +  +H+       +G ++FSD +P E    
Sbjct: 53  FSLFKSKFKKSYGSQEEHDYRFSVFKANLRRAARHQELDPTASHGVTQFSDLTPAE---- 108

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+       R+   ++  E  ++       +P+ +DWR K   GP  +Q +CGSCW+F
Sbjct: 109 --FRKQVLGLRRLRLPKDANEAPILPTSD---LPEDFDWRDKGAVGPIKNQGSCGSCWSF 163

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG + + TG+LV  S+ QLV+C  +C         SGC+G     + EYT +A 
Sbjct: 164 SATGALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 223

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY     ++  C +DK+KV        +     + +   L K GPL+V +N+
Sbjct: 224 GLMREEDYPYTGT--DRDACKFDKNKVAARVANFSVVSLDEDQIAANLVKNGPLAVAINA 281

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +    P+W+++NSWG 
Sbjct: 282 VFMQTYIGG-------VSCPYICSRRLDHGVLLVGYGSAGYSPVRMKEKPFWIIKNSWGE 334

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATIDVVKN 961
              + GF+KI RG N CG++ +   +T+  V+ 
Sbjct: 335 KWGENGFYKICRGRNVCGVDSMV--STVAAVQT 365



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 157/322 (48%), Gaps = 46/322 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           F  F  K  + Y + EE   RF  FK +  +  +H+       +G ++FSD +P E    
Sbjct: 53  FSLFKSKFKKSYGSQEEHDYRFSVFKANLRRAARHQELDPTASHGVTQFSDLTPAE---- 108

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+       R+   ++  E  ++       +P+ +DWR K   GP  +Q +CGSCW+F
Sbjct: 109 --FRKQVLGLRRLRLPKDANEAPILPTSD---LPEDFDWRDKGAVGPIKNQGSCGSCWSF 163

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG + + TG+LV  S+ QLV+C  +C      S   GC+G  +    EYT +A 
Sbjct: 164 SATGALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 223

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY     ++  C +DK+KV        +     + +   L K GPL+V +N+
Sbjct: 224 GLMREEDYPYT--GTDRDACKFDKNKVAARVANFSVVSLDEDQIAANLVKNGPLAVAINA 281

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  + P+W+ +NSWG 
Sbjct: 282 VFMQTYIGG-------VSCPYICSRRLDHGVLLVGYGSAGYSPVRMKEKPFWIIKNSWGE 334

Query: 564 IGPDEGFFKIERGNNACGIEQI 585
              + GF+KI RG N CG++ +
Sbjct: 335 KWGENGFYKICRGRNVCGVDSM 356



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 120/230 (52%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR K   GP  +Q  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 136 LPEDFDWRDKGAVGPIKNQGSCGSCWSFSATGALEGAHFLATGELVSLSEQQLVDCDHEC 195

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY     ++  C +DK+KV     
Sbjct: 196 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT--DRDACKFDKNKVAARVA 253

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 254 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSRRLDHGVL 306

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    P+W+++NSWG    + GF+KI RG N CG++ +
Sbjct: 307 LVGYGSAGYSPVRMKEKPFWIIKNSWGEKWGENGFYKICRGRNVCGVDSM 356



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + P+W+++NSWG    + GF+KI RG N CG++ +
Sbjct: 301  LDHGVLLVGYGSAGYSPVRMKEKPFWIIKNSWGEKWGENGFYKICRGRNVCGVDSM 356


>gi|301784869|ref|XP_002927853.1| PREDICTED: cathepsin F-like [Ailuropoda melanoleuca]
          Length = 394

 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 150/317 (47%), Gaps = 27/317 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           ++  FK F+    R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 93  MVSIFKEFVTTYNRTYESKEEAEWRMSVFSNNVMRAQKIQALDRGTAQYGITKFSDLTEE 152

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +    + +KM +        P  WDWR K       DQ  CG
Sbjct: 153 EF---------RTIYLNPLLRENRGKKMDLAKSIGDSAPPEWDWRNKGAVTQVKDQGMCG 203

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +K G L+  S+ +L++C K    C G              GLE+
Sbjct: 204 SCWAFSVTGNVEGQWFLKRGALLSLSEQELLDCDKVDKACLGGLPSNAYSAIKTLGGLET 263

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY YR   G    C++   K +++           + +   L + GP+SV +N+  + 
Sbjct: 264 EDDYSYR---GHVQTCSFSSKKARVYINDSVELSQNEQKLVAWLAQNGPISVAINAFGMQ 320

Query: 519 FYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
           FY      P+R     CSP+ + HAVLLVGYG +  IP+W  +NSWG    +EG++ + R
Sbjct: 321 FYRRGISHPLRP---LCSPWLIDHAVLLVGYGNRSGIPFWAIKNSWGTDWGEEGYYYLHR 377

Query: 576 GNNACGIEQIAGYATID 592
           G+ ACG+  +A  A +D
Sbjct: 378 GSGACGVNTMASSAVVD 394



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 154/319 (48%), Gaps = 32/319 (10%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           ++  FK F+    R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 93  MVSIFKEFVTTYNRTYESKEEAEWRMSVFSNNVMRAQKIQALDRGTAQYGITKFSDLTEE 152

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +    + +KM +        P  WDWR K       DQ  CG
Sbjct: 153 EF---------RTIYLNPLLRENRGKKMDLAKSIGDSAPPEWDWRNKGAVTQVKDQGMCG 203

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QAGL 821
           SCWAFS+ G +EGQ+ +K G L+  S+ +L++C K    C G    PS  Y+      GL
Sbjct: 204 SCWAFSVTGNVEGQWFLKRGALLSLSEQELLDCDKVDKACLGGL--PSNAYSAIKTLGGL 261

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y+   G    C++   K +++           + +   L + GP+SV +N+  
Sbjct: 262 ETEDDYSYR---GHVQTCSFSSKKARVYINDSVELSQNEQKLVAWLAQNGPISVAINAFG 318

Query: 882 IHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +  Y      P+R     CSP+ + HAVLLVGYG +  IP+W ++NSWG    +EG++ +
Sbjct: 319 MQFYRRGISHPLRP---LCSPWLIDHAVLLVGYGNRSGIPFWAIKNSWGTDWGEEGYYYL 375

Query: 939 ERGNNACGIEQIAGYATID 957
            RG+ ACG+  +A  A +D
Sbjct: 376 HRGSGACGVNTMASSAVVD 394



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 119/222 (53%), Gaps = 14/222 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K  
Sbjct: 181 APPEWDWRNKGAVTQVKDQGMCGSCWAFSVTGNVEGQWFLKRGALLSLSEQELLDCDKVD 240

Query: 71  SGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+      GLE+E DY Y+   G    C++   K +++         
Sbjct: 241 KACLGGL--PSNAYSAIKTLGGLETEDDYSYR---GHVQTCSFSSKKARVYINDSVELSQ 295

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
             + +   L + GP+SV +N+  +  Y      P+R     CSP+ + HAVLLVGYG + 
Sbjct: 296 NEQKLVAWLAQNGPISVAINAFGMQFYRRGISHPLRP---LCSPWLIDHAVLLVGYGNRS 352

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A +D
Sbjct: 353 GIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVVD 394



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +  IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 334  CSPWLIDHAVLLVGYGNRSGIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVV 393

Query: 1025 D 1025
            D
Sbjct: 394  D 394


>gi|356553413|ref|XP_003545051.1| PREDICTED: cysteine proteinase 15A-like [Glycine max]
          Length = 367

 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 161/328 (49%), Gaps = 50/328 (15%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 704
           N    F +F  K G++YA  EE   RF  FK +  +   H +      +G ++FSD +P 
Sbjct: 48  NAEHHFASFKAKFGKKYATKEEHDRRFGVFKSNLRRARLHAKLDPSAVHGVTKFSDLTPA 107

Query: 705 EILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E   +  GFK       R+ A+ +K   +     KD  +P  +DWR K       DQ AC
Sbjct: 108 EFRRQFLGFK-----PLRLPANAQKAPILPT---KD--LPKDFDWRDKGAVTNVKDQGAC 157

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIE 814
           GSCW+FS  G LEG + + TG+LV  S+ QLV+C   C         SGC+G     + E
Sbjct: 158 GSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFE 217

Query: 815 YTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
           Y  Q+ G++ EKDYPY   +G    C +DK+KV        +     + +   L K GPL
Sbjct: 218 YILQSGGVQKEKDYPYTGRDG---TCKFDKTKVAATVSNYSVVSLDEDQIAANLVKNGPL 274

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLV 922
           +V +N+  +  Y G           PY     L H VL+VGYG       +  N PYW++
Sbjct: 275 AVGINAVFMQTYIGG-------VSCPYICGKHLDHGVLIVGYGEGAYAPIRFKNKPYWII 327

Query: 923 RNSWGPIGPDEGFFKIERGNNACGIEQI 950
           +NSWG    + G++KI RG N CG++ +
Sbjct: 328 KNSWGESWGENGYYKICRGRNVCGVDSM 355



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 161/328 (49%), Gaps = 49/328 (14%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 338
           N    F +F  K G++YA  EE   RF  FK +  +   H +      +G ++FSD +P 
Sbjct: 48  NAEHHFASFKAKFGKKYATKEEHDRRFGVFKSNLRRARLHAKLDPSAVHGVTKFSDLTPA 107

Query: 339 EILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E   +  GFK       R+ A+ +K   +     KD  +P  +DWR K       DQ AC
Sbjct: 108 EFRRQFLGFK-----PLRLPANAQKAPILPT---KD--LPKDFDWRDKGAVTNVKDQGAC 157

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIE 449
           GSCW+FS  G LEG + + TG+LV  S+ QLV+C   C       C  GC+G  +    E
Sbjct: 158 GSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFE 217

Query: 450 YTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
           Y  Q+ G++ EKDYPY   +G    C +DK+KV        +     + +   L K GPL
Sbjct: 218 YILQSGGVQKEKDYPYTGRDG---TCKFDKTKVAATVSNYSVVSLDEDQIAANLVKNGPL 274

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLA 557
           +VG+N+  +  Y G           PY     L H VL+VGYG       +  + PYW+ 
Sbjct: 275 AVGINAVFMQTYIGG-------VSCPYICGKHLDHGVLIVGYGEGAYAPIRFKNKPYWII 327

Query: 558 RNSWGPIGPDEGFFKIERGNNACGIEQI 585
           +NSWG    + G++KI RG N CG++ +
Sbjct: 328 KNSWGESWGENGYYKICRGRNVCGVDSM 355



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 117/230 (50%), Gaps = 31/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K       DQ  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C   C
Sbjct: 136 LPKDFDWRDKGAVTNVKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVC 195

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  Q+ G++ EKDYPY   +G    C +DK+KV     
Sbjct: 196 DPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDG---TCKFDKTKVAATVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 253 NYSVVSLDEDQIAANLVKNGPLAVGINAVFMQTYIGG-------VSCPYICGKHLDHGVL 305

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           +VGYG       +  N PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 306 IVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 355



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  A GI  +     I  V     C  + L H VL+VGYG       +  + PYW++
Sbjct: 269  VKNGPLAVGINAVFMQTYIGGVSCPYICGKH-LDHGVLIVGYGEGAYAPIRFKNKPYWII 327

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    + G++KI RG N CG++ +
Sbjct: 328  KNSWGESWGENGYYKICRGRNVCGVDSM 355


>gi|38683931|gb|AAR27011.1| cysteine protease [Periserrula leucophryna]
          Length = 283

 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 140/293 (47%), Gaps = 25/293 (8%)

Query: 312 RFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREK 362
           RF+ F+++  K +           YG ++FSD + EE           R Y     D   
Sbjct: 2   RFKIFRENMKKINTLNDNELGDAEYGVTQFSDLAEEEF---------RRYYLTPKWDLSH 52

Query: 363 VEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVE 422
              ++     D   P ++DWR  N   P  +Q  CGSCWAFS    +EGQ+AI   KLV 
Sbjct: 53  RPDLVRAKIPDVDPPASFDWRDHNAVTPVKNQGMCGSCWAFSTTENIEGQWAIHRNKLVS 112

Query: 423 FSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVK 482
            S+ +LV+C K   GC G   +    E     GLESEK YPY   + E  KC +    V 
Sbjct: 113 LSEQELVDCDKLDDGCEGGLPVNAYEEIIRLGGLESEKKYPY---DAEDEKCKFTVGDVA 169

Query: 483 LFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVL 542
           ++        +    M   LYK GP+S+G+N+  + FY G         CSP +L H VL
Sbjct: 170 VYINSSVNISSNEADMAAWLYKNGPISIGINAFAMQFYMGGVSHPFSFLCSPDELDHGVL 229

Query: 543 LVGYGKQ----DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           +VGYG +     D PYW+ +NSWG     +G++ + RG+  CG+ ++   A +
Sbjct: 230 IVGYGTKKGWFSDSPYWIVKNSWGASWGVQGYYLVYRGDGVCGLNKMPTSAIV 282



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 139/293 (47%), Gaps = 26/293 (8%)

Query: 678 RFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREK 728
           RF+ F+++  K +           YG ++FSD + EE           R Y     D   
Sbjct: 2   RFKIFRENMKKINTLNDNELGDAEYGVTQFSDLAEEEF---------RRYYLTPKWDLSH 52

Query: 729 VEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVE 788
              ++     D   P ++DWR  N   P  +Q  CGSCWAFS    +EGQ+AI   KLV 
Sbjct: 53  RPDLVRAKIPDVDPPASFDWRDHNAVTPVKNQGMCGSCWAFSTTENIEGQWAIHRNKLVS 112

Query: 789 FSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVK 847
            S+ +LV+C K   GC+G        E     GLESEK YPY   + E  KC +    V 
Sbjct: 113 LSEQELVDCDKLDDGCEGGLPVNAYEEIIRLGGLESEKKYPY---DAEDEKCKFTVGDVA 169

Query: 848 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 907
           ++        +    M   LYK GP+S+ +N+  +  Y G         CSP +L H VL
Sbjct: 170 VYINSSVNISSNEADMAAWLYKNGPISIGINAFAMQFYMGGVSHPFSFLCSPDELDHGVL 229

Query: 908 LVGYGKQ----DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           +VGYG +     + PYW+V+NSWG     +G++ + RG+  CG+ ++   A +
Sbjct: 230 IVGYGTKKGWFSDSPYWIVKNSWGASWGVQGYYLVYRGDGVCGLNKMPTSAIV 282



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/219 (36%), Positives = 114/219 (52%), Gaps = 8/219 (3%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P ++DWR  N   P  +Q  CGSCWAFS    +EGQ+AI   KLV  S+ +LV+C K   
Sbjct: 67  PASFDWRDHNAVTPVKNQGMCGSCWAFSTTENIEGQWAIHRNKLVSLSEQELVDCDKLDD 126

Query: 72  GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 130
           GC+G        E     GLESEK YPY   + E  KC +    V ++        +   
Sbjct: 127 GCEGGLPVNAYEEIIRLGGLESEKKYPY---DAEDEKCKFTVGDVAVYINSSVNISSNEA 183

Query: 131 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ----DNI 186
            M   LYK GP+S+ +N+  +  Y G         CSP +L H VL+VGYG +     + 
Sbjct: 184 DMAAWLYKNGPISIGINAFAMQFYMGGVSHPFSFLCSPDELDHGVLIVGYGTKKGWFSDS 243

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           PYW+V+NSWG     +G++ + RG+  CG+ ++   A +
Sbjct: 244 PYWIVKNSWGASWGVQGYYLVYRGDGVCGLNKMPTSAIV 282


>gi|355681666|gb|AER96819.1| cathepsin W [Mustela putorius furo]
          Length = 373

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 167/333 (50%), Gaps = 38/333 (11%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           + F+ F  +  R Y+N +E   R E F  +  +  +          +G + FSD + EE 
Sbjct: 40  QVFELFRAQYNRSYSNPKEYAHRLEIFAHNLAQAQKMEVEDLATAEFGMTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G +      E     R+   +++ME      VP + DWRK K V  P  +Q  C  
Sbjct: 100 EQLHGHQ-KITPGETPAVGRKVGSEVVME-----SVPASCDWRKLKGVKSPIKEQGNCNC 153

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  ++I+  + V+ S  +L++C +   GC G F ++  +   + +GL SE
Sbjct: 154 CWAMAAAGNIEALWSIRYNQSVQVSVQELLDCNRCGDGCKGGFVWDAFVTVLNNSGLASE 213

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIH 883
           KDYP++  + ++ KC     K K+   +DF+   N  +TM   L  +GP++V +N  L+ 
Sbjct: 214 KDYPFR-GSLKRHKCLASNYK-KVAWIQDFIMLQNNEQTMANYLATHGPITVTINMKLLQ 271

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN------------------IPYWLVRNS 925
            Y    I+    TC PY + H+VLLVG+GK ++                  IPYW+++NS
Sbjct: 272 QYKKGVIKATPATCDPYLVNHSVLLVGFGKTNSSERRRAKGGHFWPHPHRPIPYWILKNS 331

Query: 926 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
           WG    +EG+F++ RG+N CGI +    A +D+
Sbjct: 332 WGAEWGEEGYFRLHRGSNTCGITKYPLTARVDL 364



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 164/333 (49%), Gaps = 37/333 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           + F+ F  +  R Y+N +E   R E F  +  +  +          +G + FSD + EE 
Sbjct: 40  QVFELFRAQYNRSYSNPKEYAHRLEIFAHNLAQAQKMEVEDLATAEFGMTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G +      E     R+   +++ME      VP + DWRK K V  P  +Q  C  
Sbjct: 100 EQLHGHQ-KITPGETPAVGRKVGSEVVME-----SVPASCDWRKLKGVKSPIKEQGNCNC 153

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  ++I+  + V+ S  +L++C +   GC G    +  +   + +GL SE
Sbjct: 154 CWAMAAAGNIEALWSIRYNQSVQVSVQELLDCNRCGDGCKGGFVWDAFVTVLNNSGLASE 213

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSETMKKILYKYGPLSVGLNSHLIH 518
           KDYP+R G+ ++ KC     K K+   +DF+   N  +TM   L  +GP++V +N  L+ 
Sbjct: 214 KDYPFR-GSLKRHKCLASNYK-KVAWIQDFIMLQNNEQTMANYLATHGPITVTINMKLLQ 271

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD------------------IPYWLARNS 560
            Y    I+    TC PY + H+VLLVG+GK +                   IPYW+ +NS
Sbjct: 272 QYKKGVIKATPATCDPYLVNHSVLLVGFGKTNSSERRRAKGGHFWPHPHRPIPYWILKNS 331

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 593
           WG    +EG+F++ RG+N CGI +    A +D+
Sbjct: 332 WGAEWGEEGYFRLHRGSNTCGITKYPLTARVDL 364



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 132/238 (55%), Gaps = 23/238 (9%)

Query: 11  VPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           VP + DWRK K V  P  +Q +C  CWA + AG +E  ++I+  + V+ S  +L++C + 
Sbjct: 129 VPASCDWRKLKGVKSPIKEQGNCNCCWAMAAAGNIEALWSIRYNQSVQVSVQELLDCNRC 188

Query: 70  CSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-N 127
             GC G F ++  +   + +GL SEKDYP++  + ++ KC     K K+   +DF+   N
Sbjct: 189 GDGCKGGFVWDAFVTVLNNSGLASEKDYPFR-GSLKRHKCLASNYK-KVAWIQDFIMLQN 246

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-- 185
             +TM   L  +GP++V +N  L+  Y    I+    TC PY + H+VLLVG+GK ++  
Sbjct: 247 NEQTMANYLATHGPITVTINMKLLQQYKKGVIKATPATCDPYLVNHSVLLVGFGKTNSSE 306

Query: 186 ----------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
                           IPYW+++NSWG    +EG+F++ RG+N CGI +    A +D+
Sbjct: 307 RRRAKGGHFWPHPHRPIPYWILKNSWGAEWGEEGYFRLHRGSNTCGITKYPLTARVDL 364


>gi|71482944|gb|AAZ32411.1| cysteine proteinase glycinain type [Nicotiana benthamiana]
          Length = 355

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 173/354 (48%), Gaps = 58/354 (16%)

Query: 628 DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH 687
           D +  QVV+  +T   + S   + E+    FK+   K G+ YA++EE   RF+ FK +  
Sbjct: 25  DPLIRQVVSETET---DDSHLLNAEHHFSLFKS---KFGKIYASEEEHDHRFKVFKANLR 78

Query: 688 K--KHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD 739
           +  +H+       +G ++FSD +P E           RTY  +   + K+      +   
Sbjct: 79  RARRHQLLDPSAEHGITKFSDLTPSEF---------RRTYLGLHKPKPKLNAEKAPILPT 129

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
             +P  +DWR         +Q +CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  
Sbjct: 130 SDLPADYDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDH 189

Query: 800 QC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLF 849
           +C         +GC G     + EYT +A GL+ EKDYPY    G   KC +DKSK+   
Sbjct: 190 ECDPEQQDSCDAGCSGGLMTTAFEYTLKAGGLQREKDYPYTGKXG---KCHFDKSKIAAA 246

Query: 850 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKNDETCSPYDLG 903
                +     + +   L K+GPL+V +N+  +  Y G    P+   ++ D         
Sbjct: 247 VTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD--------- 297

Query: 904 HAVLLVGYGKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           H VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG++ +
Sbjct: 298 HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAM 351



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 174/354 (49%), Gaps = 57/354 (16%)

Query: 262 DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH 321
           D +  QVV+  +T   + S   + E+    FK+   K G+ YA++EE   RF+ FK +  
Sbjct: 25  DPLIRQVVSETET---DDSHLLNAEHHFSLFKS---KFGKIYASEEEHDHRFKVFKANLR 78

Query: 322 K--KHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD 373
           +  +H+       +G ++FSD +P E           RTY  +   + K+      +   
Sbjct: 79  RARRHQLLDPSAEHGITKFSDLTPSEF---------RRTYLGLHKPKPKLNAEKAPILPT 129

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
             +P  +DWR         +Q +CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  
Sbjct: 130 SDLPADYDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDH 189

Query: 434 QC------SGCGGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLF 484
           +C      S   GC G  +    EYT +A GL+ EKDYPY    G+  KC +DKSK+   
Sbjct: 190 ECDPEQQDSCDAGCSGGLMTTAFEYTLKAGGLQREKDYPY---TGKXGKCHFDKSKIAAA 246

Query: 485 TGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG---TPI---RKNDETCSPYDLG 538
                +     + +   L K+GPL+VG+N+  +  Y G    P+   ++ D         
Sbjct: 247 VTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD--------- 297

Query: 539 HAVLLVGYGKQDDIP-------YWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           H VLLVGYG     P       YW+ +NSWG    + G++KI RG+N CG++ +
Sbjct: 298 HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAM 351



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 119/232 (51%), Gaps = 35/232 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         +Q  CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C
Sbjct: 132 LPADYDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHEC 191

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC G     + EYT +A GL+ EKDYPY    G   KC +DKSK+     
Sbjct: 192 DPEQQDSCDAGCSGGLMTTAFEYTLKAGGLQREKDYPYTGKXG---KCHFDKSKIAAAVT 248

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKNDETCSPYDLGHA 174
              +     + +   L K+GPL+V +N+  +  Y G    P+   ++ D         H 
Sbjct: 249 NFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD---------HG 299

Query: 175 VLLVGYGKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG++ +
Sbjct: 300 VLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAM 351



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 7/54 (12%)

Query: 972  HAVLLVGYGKQDDIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            H VLLVGYG     P       YW+++NSWG    + G++KI RG+N CG++ +
Sbjct: 298  HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAM 351


>gi|351693703|gb|AEQ59229.1| cysteine protease precursor [Clonorchis sinensis]
          Length = 327

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 163/326 (50%), Gaps = 22/326 (6%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 325
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
              GP  D+  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C +   GC G    +
Sbjct: 124 GAVGPVLDKGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDEVDEGCNGGTPQQ 183

Query: 446 QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKY 505
              +     GL+ + DYPY    G + +C    SKVK++     +     +   ++L + 
Sbjct: 184 AFKQILGMGGLQLDSDYPYE---GREGQCRMVPSKVKVYINGSKILPEDEQIQAQMLKET 240

Query: 506 GPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           GP S  LN+  + FY    +      C    L HAVL VGYGK+  +PYW  +NSW  + 
Sbjct: 241 GPFSSALNALSLQFYTEGILHPLPALCDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMF 300

Query: 566 PDEGFFKIERGNNACGIEQIAGYATI 591
            + G+F+I RG+  CGI  +   + I
Sbjct: 301 GENGYFRIYRGDGPCGINTLVSTSII 326



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 165/326 (50%), Gaps = 23/326 (7%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 691
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
              GP  D+  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C +   GC+G   + 
Sbjct: 124 GAVGPVLDKGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDEVDEGCNGGTPQQ 183

Query: 812 SI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKY 870
           +  +     GL+ + DYPY+   G+   C    SKVK++     +     +   ++L + 
Sbjct: 184 AFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVKVYINGSKILPEDEQIQAQMLKET 240

Query: 871 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           GP S  LN+  +  Y    +      C    L HAVL VGYGK+  +PYW V+NSW  + 
Sbjct: 241 GPFSSALNALSLQFYTEGILHPLPALCDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMF 300

Query: 931 PDEGFFKIERGNNACGIEQIAGYATI 956
            + G+F+I RG+  CGI  +   + I
Sbjct: 301 GENGYFRIYRGDGPCGINTLVSTSII 326



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 117/225 (52%), Gaps = 12/225 (5%)

Query: 10  PVP--------DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           PVP        D +DWR     GP  D+ DCGSCWAFS  G +EGQ+  KT  L++ S+ 
Sbjct: 105 PVPFIRMDVDDDNFDWRNHGAVGPVLDKGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQ 164

Query: 62  QLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           QL++C +   GC+G   + +  +     GL+ + DYPY+   G+   C    SKVK++  
Sbjct: 165 QLLDCDEVDEGCNGGTPQQAFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVKVYIN 221

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
              +     +   ++L + GP S  LN+  +  Y    +      C    L HAVL VGY
Sbjct: 222 GSKILPEDEQIQAQMLKETGPFSSALNALSLQFYTEGILHPLPALCDAQSLNHAVLTVGY 281

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 282 GKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGPCGINTLVSTSII 326



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L HAVL VGYGK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 267  CDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGPCGINTLVSTSII 326


>gi|356564325|ref|XP_003550405.1| PREDICTED: cysteine proteinase 15A [Glycine max]
          Length = 370

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 151/327 (46%), Gaps = 48/327 (14%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 704
           N    F +F  K  + YA  EE   RF  FK +  +   H +      +G ++FSD +P 
Sbjct: 51  NAEHHFASFKAKFAKTYATKEEHDHRFGVFKSNLRRARLHAKLDPSAVHGVTKFSDLTPA 110

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E           R +  +   R         +     +P  +DWR K       DQ ACG
Sbjct: 111 EF---------RRQFLGLKPLRFPAHAQKAPILPTKDLPKDFDWRDKGAVTNVKDQGACG 161

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCW+FS  G LEG + + TG+LV  S+ QLV+C   C         SGC+G     + EY
Sbjct: 162 SCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEY 221

Query: 816 THQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
             Q+ G++ EKDYPY   +G    C +DK+KV        +     E +   L K GPL+
Sbjct: 222 ILQSGGVQKEKDYPYTGRDG---TCKFDKTKVAATVSNYSVVSLDEEQIAANLVKNGPLA 278

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVR 923
           V +N+  +  Y G           PY     L H VLLVGYG       +  N PYW+++
Sbjct: 279 VAINAVFMQTYVGG-------VSCPYICGKHLDHGVLLVGYGEGAYAPIRFKNKPYWIIK 331

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQI 950
           NSWG    + G++KI RG N CG++ +
Sbjct: 332 NSWGESWGENGYYKICRGRNVCGVDSM 358



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 150/327 (45%), Gaps = 47/327 (14%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 338
           N    F +F  K  + YA  EE   RF  FK +  +   H +      +G ++FSD +P 
Sbjct: 51  NAEHHFASFKAKFAKTYATKEEHDHRFGVFKSNLRRARLHAKLDPSAVHGVTKFSDLTPA 110

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E           R +  +   R         +     +P  +DWR K       DQ ACG
Sbjct: 111 EF---------RRQFLGLKPLRFPAHAQKAPILPTKDLPKDFDWRDKGAVTNVKDQGACG 161

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEY 450
           SCW+FS  G LEG + + TG+LV  S+ QLV+C   C       C  GC+G  +    EY
Sbjct: 162 SCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEY 221

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
             Q+ G++ EKDYPY   +G    C +DK+KV        +     E +   L K GPL+
Sbjct: 222 ILQSGGVQKEKDYPYTGRDG---TCKFDKTKVAATVSNYSVVSLDEEQIAANLVKNGPLA 278

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLAR 558
           V +N+  +  Y G           PY     L H VLLVGYG       +  + PYW+ +
Sbjct: 279 VAINAVFMQTYVGG-------VSCPYICGKHLDHGVLLVGYGEGAYAPIRFKNKPYWIIK 331

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQI 585
           NSWG    + G++KI RG N CG++ +
Sbjct: 332 NSWGESWGENGYYKICRGRNVCGVDSM 358



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 117/230 (50%), Gaps = 31/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K       DQ  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C   C
Sbjct: 139 LPKDFDWRDKGAVTNVKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVC 198

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  Q+ G++ EKDYPY   +G    C +DK+KV     
Sbjct: 199 DPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDG---TCKFDKTKVAATVS 255

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 256 NYSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGG-------VSCPYICGKHLDHGVL 308

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +  N PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 309 LVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 358



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 303  LDHGVLLVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 358


>gi|224066056|ref|XP_002302004.1| predicted protein [Populus trichocarpa]
 gi|222843730|gb|EEE81277.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 169/364 (46%), Gaps = 55/364 (15%)

Query: 616 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEI 675
            VAS +    L D +  QVV+  +          D  N    F +F  K G+ YA  EE 
Sbjct: 18  AVASTVSSNDLDDPLIRQVVSDGED---------DLLNAEHHFTSFKSKFGKTYATQEEH 68

Query: 676 KERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE 727
             RF  FK +    KKH+       +G ++FSD +P+E   +  F   +R + R+  D  
Sbjct: 69  DYRFGVFKANLRRAKKHQMIDPTAAHGITKFSDLTPKEF--RRQFLGLKR-WLRLPTDAN 125

Query: 728 KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLV 787
           K   +         +P  +DWR         DQ +CGSCW+FS  G LEG + + TG+L 
Sbjct: 126 KAPILPTT-----DLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELA 180

Query: 788 EFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKF 837
             S+ QLV+C  +C         SGCDG     + EY  +A GLE E+DYPY   +G   
Sbjct: 181 SLSEQQLVDCDHECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGG-- 238

Query: 838 KCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 897
            C +DKSKV        +     + +   L K+GPLSV +N+  +  Y G          
Sbjct: 239 TCKFDKSKVVASVSNFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGG-------VS 291

Query: 898 SPYDLG----HAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
            PY       H VLLVGYG            P+W+++NSWG    + G++KI RG N CG
Sbjct: 292 CPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICG 351

Query: 947 IEQI 950
           ++ +
Sbjct: 352 VDSM 355



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 173/376 (46%), Gaps = 55/376 (14%)

Query: 250 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEI 309
            VAS +    L D +  QVV+  +          D  N    F +F  K G+ YA  EE 
Sbjct: 18  AVASTVSSNDLDDPLIRQVVSDGED---------DLLNAEHHFTSFKSKFGKTYATQEEH 68

Query: 310 KERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE 361
             RF  FK +    KKH+       +G ++FSD +P+E   +  F   +R + R+  D  
Sbjct: 69  DYRFGVFKANLRRAKKHQMIDPTAAHGITKFSDLTPKEF--RRQFLGLKR-WLRLPTDAN 125

Query: 362 KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLV 421
           K   +         +P  +DWR         DQ +CGSCW+FS  G LEG + + TG+L 
Sbjct: 126 KAPILPTT-----DLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELA 180

Query: 422 EFSKSQLVECAKQCS-----GC-GGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKF 472
             S+ QLV+C  +C       C  GCDG  +    EY  +A GLE E+DYPY   +G   
Sbjct: 181 SLSEQQLVDCDHECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGG-- 238

Query: 473 KCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETC 532
            C +DKSKV        +     + +   L K+GPLSV +N+  +  Y G          
Sbjct: 239 TCKFDKSKVVASVSNFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGG-------VS 291

Query: 533 SPYDLG----HAVLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
            PY       H VLLVGYG          + P+W+ +NSWG    + G++KI RG N CG
Sbjct: 292 CPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICG 351

Query: 582 IEQ-IAGYATIDVVIQ 596
           ++  ++  A I    Q
Sbjct: 352 VDSMVSTVAAIHTTAQ 367



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 118/242 (48%), Gaps = 31/242 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         DQ  CGSCW+FS  G LEG + + TG+L   S+ QLV+C  +C
Sbjct: 135 LPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGCDG     + EY  +A GLE E+DYPY   +G    C +DKSKV     
Sbjct: 195 DPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGG--TCKFDKSKVVASVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVL 176
              +     + +   L K+GPLSV +N+  +  Y G           PY       H VL
Sbjct: 253 NFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGG-------VSCPYICSKRQDHGVL 305

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVV 228
           LVGYG            P+W+++NSWG    + G++KI RG N CG++  ++  A I   
Sbjct: 306 LVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAAIHTT 365

Query: 229 IQ 230
            Q
Sbjct: 366 AQ 367



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 7/54 (12%)

Query: 972  HAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            H VLLVGYG          + P+W+++NSWG    + G++KI RG N CG++ +
Sbjct: 302  HGVLLVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSM 355


>gi|225427714|ref|XP_002264345.1| PREDICTED: cysteine proteinase RD19a [Vitis vinifera]
          Length = 377

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 173/368 (47%), Gaps = 57/368 (15%)

Query: 628 DRITDQVVARVDTLAIEGSLTFDNENILET----FKAFIVKRGRQYANDEEIKERFEYFK 683
           D I  QVV  +    +EGS   + EN+L      F  F  + G+ YA+ EE   RF+ FK
Sbjct: 33  DIIIRQVVPELGD--VEGS---EEENLLTADHHHFSIFKRRFGKSYASQEEHDYRFKVFK 87

Query: 684 QDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 735
            +  +  +H++      +G ++FSD +P E            TY  +   +   +     
Sbjct: 88  ANLRRARRHQQLDPSATHGVTQFSDLTPAEF---------RGTYLGLRPLKLPHDAQKAP 138

Query: 736 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 795
           +     +P+ +DWR         +Q +CGSCW+FS  G LEG   + TG LV  S+ QLV
Sbjct: 139 ILPTNDLPEDFDWRDHGAVTAVKNQGSCGSCWSFSTTGALEGANFLATGNLVSLSEQQLV 198

Query: 796 ECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK 845
           EC  +C         SGC+G     + EYT +A GL  E+DYPY     ++  C +DK+K
Sbjct: 199 ECDHECDPEEMGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYTGT--DRGSCKFDKTK 256

Query: 846 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----D 901
           +        +     + +   L K GPL+V +N+  +  Y G           PY     
Sbjct: 257 IAASVSNFSVISLDEDQIAANLVKNGPLAVAINAVFMQTYVGG-------VSCPYICSKR 309

Query: 902 LGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGY 953
           L H VLLVGYG       +  + PYW+++NSWG    + GF+KI RG N CG++  ++  
Sbjct: 310 LDHGVLLVGYGSAGYAPIRMKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSMVSTV 369

Query: 954 ATIDVVKN 961
           A +    N
Sbjct: 370 AAVHTTSN 377



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 168/356 (47%), Gaps = 55/356 (15%)

Query: 262 DRITDQVVARVDTLAIEGSLTFDNENILET----FKAFIVKRGRQYANDEEIKERFEYFK 317
           D I  QVV  +    +EGS   + EN+L      F  F  + G+ YA+ EE   RF+ FK
Sbjct: 33  DIIIRQVVPELGD--VEGS---EEENLLTADHHHFSIFKRRFGKSYASQEEHDYRFKVFK 87

Query: 318 QDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 369
            +  +  +H++      +G ++FSD +P E            TY  +   +   +     
Sbjct: 88  ANLRRARRHQQLDPSATHGVTQFSDLTPAEF---------RGTYLGLRPLKLPHDAQKAP 138

Query: 370 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 429
           +     +P+ +DWR         +Q +CGSCW+FS  G LEG   + TG LV  S+ QLV
Sbjct: 139 ILPTNDLPEDFDWRDHGAVTAVKNQGSCGSCWSFSTTGALEGANFLATGNLVSLSEQQLV 198

Query: 430 ECAKQC------SGCGGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSK 480
           EC  +C      S   GC+G  +    EYT +A GL  E+DYPY     ++  C +DK+K
Sbjct: 199 ECDHECDPEEMGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYT--GTDRGSCKFDKTK 256

Query: 481 VKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----D 536
           +        +     + +   L K GPL+V +N+  +  Y G           PY     
Sbjct: 257 IAASVSNFSVISLDEDQIAANLVKNGPLAVAINAVFMQTYVGG-------VSCPYICSKR 309

Query: 537 LGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           L H VLLVGYG       +  D PYW+ +NSWG    + GF+KI RG N CG++ +
Sbjct: 310 LDHGVLLVGYGSAGYAPIRMKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSM 365



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 116/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR         +Q  CGSCW+FS  G LEG   + TG LV  S+ QLVEC  +C
Sbjct: 145 LPEDFDWRDHGAVTAVKNQGSCGSCWSFSTTGALEGANFLATGNLVSLSEQQLVECDHEC 204

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY     ++  C +DK+K+     
Sbjct: 205 DPEEMGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYTGT--DRGSCKFDKTKIAASVS 262

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 263 NFSVISLDEDQIAANLVKNGPLAVAINAVFMQTYVGG-------VSCPYICSKRLDHGVL 315

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +  + PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 316 LVGYGSAGYAPIRMKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSM 365



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  D PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 310  LDHGVLLVGYGSAGYAPIRMKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSM 365


>gi|240255643|ref|NP_567010.5| Papain family cysteine protease [Arabidopsis thaliana]
 gi|17979125|gb|AAL49820.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332645795|gb|AEE79316.1| Papain family cysteine protease [Arabidopsis thaliana]
          Length = 367

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 174/368 (47%), Gaps = 62/368 (16%)

Query: 633 QVVARVDTLAIEGSLTFDNE----NILET-----FKAFIVKRGRQYANDEEIKERFEYFK 683
            VVA V+ L I   +T DN     N+L T     F+ F+   G+ Y+  EE   R   F 
Sbjct: 18  HVVASVEDLTIR-QVTADNRRIRPNLLGTHTESKFRLFMSDYGKNYSTREEYIHRLGIFA 76

Query: 684 QDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE-KVEKMLM 734
           ++  K  E         +G ++FSD + EE      FK        +   R   V     
Sbjct: 77  KNVLKAAEHQMMDPSAVHGVTQFSDLTEEE------FKRMYTGVADVGGSRGGTVGAEAP 130

Query: 735 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 794
            VE DG +P+ +DWR+K       +Q ACGSCWAFS  G  EG + + TGKL+  S+ QL
Sbjct: 131 MVEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQL 189

Query: 795 VECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKS 844
           V+C + C         +GC G     + EY  +A GLE E+ YPY    G++  C +D  
Sbjct: 190 VDCDQACDPKDKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPY---TGKRGHCKFDPE 246

Query: 845 KVKLFTGKDFLHFNG----SETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETC 897
           KV +      L+F         +   L ++GPL+V LN+  +  Y G    P+      C
Sbjct: 247 KVAV----RVLNFTTIPLDENQIAANLVRHGPLAVGLNAVFMQTYIGGVSCPL-----IC 297

Query: 898 SPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           S  ++ H VLLVGYG +        N PYW+++NSWG    + G++K+ RG++ CGI  +
Sbjct: 298 SKRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSM 357

Query: 951 AGYATIDV 958
                  V
Sbjct: 358 VSAVATQV 365



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 172/365 (47%), Gaps = 55/365 (15%)

Query: 267 QVVARVDTLAIEGSLTFDNE----NILET-----FKAFIVKRGRQYANDEEIKERFEYFK 317
            VVA V+ L I   +T DN     N+L T     F+ F+   G+ Y+  EE   R   F 
Sbjct: 18  HVVASVEDLTIR-QVTADNRRIRPNLLGTHTESKFRLFMSDYGKNYSTREEYIHRLGIFA 76

Query: 318 QDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE-KVEKMLM 368
           ++  K  E         +G ++FSD + EE      FK        +   R   V     
Sbjct: 77  KNVLKAAEHQMMDPSAVHGVTQFSDLTEEE------FKRMYTGVADVGGSRGGTVGAEAP 130

Query: 369 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 428
            VE DG +P+ +DWR+K       +Q ACGSCWAFS  G  EG + + TGKL+  S+ QL
Sbjct: 131 MVEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQL 189

Query: 429 VECAKQC---------SGCGGCDGLEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDK 478
           V+C + C         +GCGG   +    EY  +A GLE E+ YPY    G++  C +D 
Sbjct: 190 VDCDQACDPKDKKACDNGCGG-GLMTNAYEYLMEAGGLEEERSYPY---TGKRGHCKFDP 245

Query: 479 SKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG---TPIRKNDETCSPY 535
            KV +              +   L ++GPL+VGLN+  +  Y G    P+      CS  
Sbjct: 246 EKVAVRVLNFTTIPLDENQIAANLVRHGPLAVGLNAVFMQTYIGGVSCPL-----ICSKR 300

Query: 536 DLGHAVLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
           ++ H VLLVGYG +        + PYW+ +NSWG    + G++K+ RG++ CGI  +   
Sbjct: 301 NVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSMVSA 360

Query: 589 ATIDV 593
               V
Sbjct: 361 VATQV 365



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 127/247 (51%), Gaps = 37/247 (14%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           VE DG +P+ +DWR+K       +Q  CGSCWAFS  G  EG + + TGKL+  S+ QLV
Sbjct: 132 VEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQLV 190

Query: 65  ECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK 114
           +C + C         +GC G     + EY  +A GLE E+ YPY    G++  C +D  K
Sbjct: 191 DCDQACDPKDKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPY---TGKRGHCKFDPEK 247

Query: 115 VKLFTGKDFLHFNG----SETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCS 167
           V +      L+F         +   L ++GPL+V LN+  +  Y G    P+      CS
Sbjct: 248 VAV----RVLNFTTIPLDENQIAANLVRHGPLAVGLNAVFMQTYIGGVSCPL-----ICS 298

Query: 168 PYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
             ++ H VLLVGYG +        N PYW+++NSWG    + G++K+ RG++ CGI  + 
Sbjct: 299 KRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSMV 358

Query: 221 GYATIDV 227
                 V
Sbjct: 359 SAVATQV 365


>gi|118489556|gb|ABK96580.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 367

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 168/364 (46%), Gaps = 55/364 (15%)

Query: 616 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEI 675
            VAS +    L D +  QVV+  +          D  N    F +F  K G+ YA  EE 
Sbjct: 18  AVASTVSSTDLDDPLIIQVVSDGED---------DLLNAEHHFTSFKSKFGKTYATQEEH 68

Query: 676 KERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE 727
             RF  FK +    KKH+       +G ++FSD +P+E   +  F   +R   R+  D  
Sbjct: 69  DYRFGVFKANLRRAKKHQMIDPTAAHGVTKFSDLTPKEF--RRQFLGLKRRL-RLPTDAN 125

Query: 728 KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLV 787
           K   +         +P  +DWR         DQ +CGSCW+FS  G LEG + + TG+L 
Sbjct: 126 KAPILPTT-----DLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELA 180

Query: 788 EFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKF 837
             S+ QLV+C  +C         SGCDG     + EY  +A GLE E+DYPY   +G   
Sbjct: 181 SLSEQQLVDCDHECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGG-- 238

Query: 838 KCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 897
            C +DKSKV        +     + +   L K+GPLSV +N+  +  Y G          
Sbjct: 239 TCKFDKSKVVASVSNFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGG-------VS 291

Query: 898 SPYDLG----HAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
            PY       H VLLVGYG            P+W+++NSWG    + G++KI RG N CG
Sbjct: 292 CPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICG 351

Query: 947 IEQI 950
           ++ +
Sbjct: 352 VDSM 355



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 172/376 (45%), Gaps = 55/376 (14%)

Query: 250 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEI 309
            VAS +    L D +  QVV+  +          D  N    F +F  K G+ YA  EE 
Sbjct: 18  AVASTVSSTDLDDPLIIQVVSDGED---------DLLNAEHHFTSFKSKFGKTYATQEEH 68

Query: 310 KERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE 361
             RF  FK +    KKH+       +G ++FSD +P+E   +  F   +R   R+  D  
Sbjct: 69  DYRFGVFKANLRRAKKHQMIDPTAAHGVTKFSDLTPKEF--RRQFLGLKRRL-RLPTDAN 125

Query: 362 KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLV 421
           K   +         +P  +DWR         DQ +CGSCW+FS  G LEG + + TG+L 
Sbjct: 126 KAPILPTT-----DLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELA 180

Query: 422 EFSKSQLVECAKQCS-----GC-GGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKF 472
             S+ QLV+C  +C       C  GCDG  +    EY  +A GLE E+DYPY   +G   
Sbjct: 181 SLSEQQLVDCDHECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGG-- 238

Query: 473 KCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETC 532
            C +DKSKV        +     + +   L K+GPLSV +N+  +  Y G          
Sbjct: 239 TCKFDKSKVVASVSNFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGG-------VS 291

Query: 533 SPYDLG----HAVLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
            PY       H VLLVGYG          + P+W+ +NSWG    + G++KI RG N CG
Sbjct: 292 CPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICG 351

Query: 582 IEQ-IAGYATIDVVIQ 596
           ++  ++  A I    Q
Sbjct: 352 VDSMVSTVAAIHTAAQ 367



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 118/242 (48%), Gaps = 31/242 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         DQ  CGSCW+FS  G LEG + + TG+L   S+ QLV+C  +C
Sbjct: 135 LPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGCDG     + EY  +A GLE E+DYPY   +G    C +DKSKV     
Sbjct: 195 DPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGG--TCKFDKSKVVASVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVL 176
              +     + +   L K+GPLSV +N+  +  Y G           PY       H VL
Sbjct: 253 NFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGG-------VSCPYICSKRQDHGVL 305

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVV 228
           LVGYG            P+W+++NSWG    + G++KI RG N CG++  ++  A I   
Sbjct: 306 LVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAAIHTA 365

Query: 229 IQ 230
            Q
Sbjct: 366 AQ 367



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 7/54 (12%)

Query: 972  HAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            H VLLVGYG          + P+W+++NSWG    + G++KI RG N CG++ +
Sbjct: 302  HGVLLVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSM 355


>gi|118485796|gb|ABK94746.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 168/364 (46%), Gaps = 55/364 (15%)

Query: 616 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEI 675
            VAS +    L D +  QVV+  +          D  N    F +F  K G+ YA  EE 
Sbjct: 18  AVASTVSSNDLDDPLIRQVVSDGED---------DLLNAEHHFTSFKSKFGKTYATQEEH 68

Query: 676 KERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE 727
             RF  FK +    KKH+       +G ++FSD +P+E   +  F   +R + R+  D  
Sbjct: 69  DYRFGVFKANLRRAKKHQMIDPTAAHGITKFSDLTPKEF--RRQFLGLKR-WLRLPTDAN 125

Query: 728 KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLV 787
           K   +         +P  +DWR         DQ +CGSCW+FS  G LEG + + TG+L 
Sbjct: 126 KAPILPTT-----DLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELA 180

Query: 788 EFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKF 837
             S+ QLV+C  +C         SGCDG     + EY  +A GLE E DYPY   +G   
Sbjct: 181 SLSEQQLVDCDHECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREADYPYTGTDGG-- 238

Query: 838 KCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 897
            C +DKSKV        +     + +   L K+GPLSV +N+  +  Y G          
Sbjct: 239 TCKFDKSKVVASVSNFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGG-------VS 291

Query: 898 SPYDLG----HAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
            PY       H VLLVGYG            P+W+++NSWG    + G++KI RG N CG
Sbjct: 292 CPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICG 351

Query: 947 IEQI 950
           ++ +
Sbjct: 352 VDSM 355



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 172/376 (45%), Gaps = 55/376 (14%)

Query: 250 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEI 309
            VAS +    L D +  QVV+  +          D  N    F +F  K G+ YA  EE 
Sbjct: 18  AVASTVSSNDLDDPLIRQVVSDGED---------DLLNAEHHFTSFKSKFGKTYATQEEH 68

Query: 310 KERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE 361
             RF  FK +    KKH+       +G ++FSD +P+E   +  F   +R + R+  D  
Sbjct: 69  DYRFGVFKANLRRAKKHQMIDPTAAHGITKFSDLTPKEF--RRQFLGLKR-WLRLPTDAN 125

Query: 362 KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLV 421
           K   +         +P  +DWR         DQ +CGSCW+FS  G LEG + + TG+L 
Sbjct: 126 KAPILPTT-----DLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELA 180

Query: 422 EFSKSQLVECAKQCS-----GC-GGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKF 472
             S+ QLV+C  +C       C  GCDG  +    EY  +A GLE E DYPY   +G   
Sbjct: 181 SLSEQQLVDCDHECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREADYPYTGTDGG-- 238

Query: 473 KCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETC 532
            C +DKSKV        +     + +   L K+GPLSV +N+  +  Y G          
Sbjct: 239 TCKFDKSKVVASVSNFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGG-------VS 291

Query: 533 SPYDLG----HAVLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
            PY       H VLLVGYG          + P+W+ +NSWG    + G++KI RG N CG
Sbjct: 292 CPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICG 351

Query: 582 IEQ-IAGYATIDVVIQ 596
           ++  ++  A I    Q
Sbjct: 352 VDSMVSTVAAIHTTAQ 367



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 117/242 (48%), Gaps = 31/242 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         DQ  CGSCW+FS  G LEG + + TG+L   S+ QLV+C  +C
Sbjct: 135 LPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGCDG     + EY  +A GLE E DYPY   +G    C +DKSKV     
Sbjct: 195 DPEEYGACDSGCDGGLMNNAFEYALKAGGLEREADYPYTGTDGG--TCKFDKSKVVASVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVL 176
              +     + +   L K+GPLSV +N+  +  Y G           PY       H VL
Sbjct: 253 NFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGG-------VSCPYICSKRQDHGVL 305

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVV 228
           LVGYG            P+W+++NSWG    + G++KI RG N CG++  ++  A I   
Sbjct: 306 LVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAAIHTT 365

Query: 229 IQ 230
            Q
Sbjct: 366 AQ 367



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 7/54 (12%)

Query: 972  HAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            H VLLVGYG          + P+W+++NSWG    + G++KI RG N CG++ +
Sbjct: 302  HGVLLVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSM 355


>gi|449464688|ref|XP_004150061.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
 gi|449519862|ref|XP_004166953.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 377

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/319 (33%), Positives = 157/319 (49%), Gaps = 39/319 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK 709
           F  F  K G+ YA+ EE   RF  FK +  +  +H+       +G ++FSD +P E   +
Sbjct: 60  FSVFKQKFGKSYASKEEHDHRFRVFKANLKRAQRHQALDPSATHGVTQFSDLTPSEF--R 117

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F         + AD  K   +      DG +P  +DWR K       +Q +CGSCW+F
Sbjct: 118 RSFLGLRSRRLGLPADANKAPIL----PTDG-LPTDFDWRDKGAVSEVKNQGSCGSCWSF 172

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G     + EYT ++ 
Sbjct: 173 SATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEKGSCDSGCNGGLMNSAFEYTLKSG 232

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY     ++  C +DKSK+        +     E +   L K GPL+V +N+
Sbjct: 233 GLMKEQDYPYTGT--DRGTCKFDKSKIAASVANFSVVSLDEEQIAANLVKNGPLAVAINA 290

Query: 880 DLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGP 931
             +  Y  G         CS + L H VLLVGYG       +  + PYW+++NSWG    
Sbjct: 291 VFMQTYIKGVSC---PYICSKH-LDHGVLLVGYGSDGYAPIRLKDKPYWIIKNSWGANWG 346

Query: 932 DEGFFKIERGNNACGIEQI 950
           + G++KI RG N CG++ +
Sbjct: 347 ENGYYKICRGRNICGVDSM 365



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 156/319 (48%), Gaps = 38/319 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK 343
           F  F  K G+ YA+ EE   RF  FK +  +  +H+       +G ++FSD +P E   +
Sbjct: 60  FSVFKQKFGKSYASKEEHDHRFRVFKANLKRAQRHQALDPSATHGVTQFSDLTPSEF--R 117

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F         + AD  K   +      DG +P  +DWR K       +Q +CGSCW+F
Sbjct: 118 RSFLGLRSRRLGLPADANKAPIL----PTDG-LPTDFDWRDKGAVSEVKNQGSCGSCWSF 172

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G  +    EYT ++ 
Sbjct: 173 SATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEKGSCDSGCNGGLMNSAFEYTLKSG 232

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY     ++  C +DKSK+        +     E +   L K GPL+V +N+
Sbjct: 233 GLMKEQDYPYT--GTDRGTCKFDKSKIAASVANFSVVSLDEEQIAANLVKNGPLAVAINA 290

Query: 515 HLIHFY-NGTPIRKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLARNSWGPIGP 566
             +  Y  G         CS + L H VLLVGYG       +  D PYW+ +NSWG    
Sbjct: 291 VFMQTYIKGVSC---PYICSKH-LDHGVLLVGYGSDGYAPIRLKDKPYWIIKNSWGANWG 346

Query: 567 DEGFFKIERGNNACGIEQI 585
           + G++KI RG N CG++ +
Sbjct: 347 ENGYYKICRGRNICGVDSM 365



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 118/227 (51%), Gaps = 24/227 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K       +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 145 LPTDFDWRDKGAVSEVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHEC 204

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT ++ GL  E+DYPY     ++  C +DKSK+     
Sbjct: 205 DPEEKGSCDSGCNGGLMNSAFEYTLKSGGLMKEQDYPYTGT--DRGTCKFDKSKIAASVA 262

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVG 179
              +     E +   L K GPL+V +N+  +  Y  G         CS + L H VLLVG
Sbjct: 263 NFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYIKGVSC---PYICSKH-LDHGVLLVG 318

Query: 180 YG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           YG       +  + PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 319 YGSDGYAPIRLKDKPYWIIKNSWGANWGENGYYKICRGRNICGVDSM 365



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  A  I  +     I  V     CS + L H VLLVGYG       +  D PYW++
Sbjct: 279  VKNGPLAVAINAVFMQTYIKGVSCPYICSKH-LDHGVLLVGYGSDGYAPIRLKDKPYWII 337

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    + G++KI RG N CG++ +
Sbjct: 338  KNSWGANWGENGYYKICRGRNICGVDSM 365


>gi|73983670|ref|XP_540846.2| PREDICTED: cathepsin W [Canis lupus familiaris]
          Length = 374

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 163/344 (47%), Gaps = 41/344 (11%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           + F  F ++  R Y+N EE   R + F  +  +  +          +G + FSD + EE 
Sbjct: 40  QVFALFQIQYNRSYSNPEEYARRLDIFAHNLAQAQQLEDEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G       ++R+  +   V + +   E   PVP   DWRK   +  P   Q  C  
Sbjct: 100 GQFYG-------HQRMAGEAPSVGRKVESEEWGEPVPPTCDWRKLPGIISPIKQQGNCRC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  + I+  + VE S  +L++C +   GC G F ++  I   + +GL S 
Sbjct: 153 CWAMAAAGNIEALWGIRYHQPVEVSVQELLDCGRCGDGCKGGFTWDAFITVLNNSGLASA 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIH 883
           KDYP+   N +  +C   K K K+   +DF+   G+E  +   L   GP++V +N  L+ 
Sbjct: 213 KDYPFL-GNTKPHRCLAKKYK-KVAWIQDFIMLQGNEQAIAWYLATKGPITVTINMKLLQ 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN------------------IPYWLVRNS 925
            Y    I+    TC P  + H+VLLVG+GK  +                  IPYW+++NS
Sbjct: 271 HYQKGVIQATHTTCDPQRVDHSVLLVGFGKSKSVAGKQAEGGSSRPRPHHPIPYWILKNS 330

Query: 926 WGPIGPDEGFFKIERGNNACGIEQIAGYATID--VVKNDETCSP 967
           WG    +EG+F++ RGNN CGI +    A +D  V K   +C P
Sbjct: 331 WGAEWGEEGYFRLHRGNNTCGITKYPVTARVDLRVKKRLVSCPP 374



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 161/340 (47%), Gaps = 39/340 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           + F  F ++  R Y+N EE   R + F  +  +  +          +G + FSD + EE 
Sbjct: 40  QVFALFQIQYNRSYSNPEEYARRLDIFAHNLAQAQQLEDEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G       ++R+  +   V + +   E   PVP   DWRK   +  P   Q  C  
Sbjct: 100 GQFYG-------HQRMAGEAPSVGRKVESEEWGEPVPPTCDWRKLPGIISPIKQQGNCRC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  + I+  + VE S  +L++C +   GC G    +  I   + +GL S 
Sbjct: 153 CWAMAAAGNIEALWGIRYHQPVEVSVQELLDCGRCGDGCKGGFTWDAFITVLNNSGLASA 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIH 518
           KDYP+  GN +  +C   K K K+   +DF+   G+E  +   L   GP++V +N  L+ 
Sbjct: 213 KDYPFL-GNTKPHRCLAKKYK-KVAWIQDFIMLQGNEQAIAWYLATKGPITVTINMKLLQ 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK------------------QDDIPYWLARNS 560
            Y    I+    TC P  + H+VLLVG+GK                     IPYW+ +NS
Sbjct: 271 HYQKGVIQATHTTCDPQRVDHSVLLVGFGKSKSVAGKQAEGGSSRPRPHHPIPYWILKNS 330

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDV-VIQRLV 599
           WG    +EG+F++ RGNN CGI +    A +D+ V +RLV
Sbjct: 331 WGAEWGEEGYFRLHRGNNTCGITKYPVTARVDLRVKKRLV 370



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 129/246 (52%), Gaps = 24/246 (9%)

Query: 10  PVPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           PVP   DWRK   +  P   Q +C  CWA + AG +E  + I+  + VE S  +L++C +
Sbjct: 127 PVPPTCDWRKLPGIISPIKQQGNCRCCWAMAAAGNIEALWGIRYHQPVEVSVQELLDCGR 186

Query: 69  QCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              GC G F ++  I   + +GL S KDYP+   N +  +C   K K K+   +DF+   
Sbjct: 187 CGDGCKGGFTWDAFITVLNNSGLASAKDYPFL-GNTKPHRCLAKKYK-KVAWIQDFIMLQ 244

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN- 185
           G+E  +   L   GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK  + 
Sbjct: 245 GNEQAIAWYLATKGPITVTINMKLLQHYQKGVIQATHTTCDPQRVDHSVLLVGFGKSKSV 304

Query: 186 -----------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV- 227
                            IPYW+++NSWG    +EG+F++ RGNN CGI +    A +D+ 
Sbjct: 305 AGKQAEGGSSRPRPHHPIPYWILKNSWGAEWGEEGYFRLHRGNNTCGITKYPVTARVDLR 364

Query: 228 VIQRLV 233
           V +RLV
Sbjct: 365 VKKRLV 370



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 18/81 (22%)

Query: 964  TCSPYDLGHAVLLVGYGK------------------QDDIPYWLVRNSWGPIGPDEGFFK 1005
            TC P  + H+VLLVG+GK                     IPYW+++NSWG    +EG+F+
Sbjct: 283  TCDPQRVDHSVLLVGFGKSKSVAGKQAEGGSSRPRPHHPIPYWILKNSWGAEWGEEGYFR 342

Query: 1006 IERGNNACGIEQIAGYATIDV 1026
            + RGNN CGI +    A +D+
Sbjct: 343  LHRGNNTCGITKYPVTARVDL 363


>gi|357148994|ref|XP_003574963.1| PREDICTED: cysteine proteinase 1-like [Brachypodium distachyon]
          Length = 377

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 167/335 (49%), Gaps = 48/335 (14%)

Query: 650 DNENILET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSD 700
           DN+  L + F +F+ + G+ Y + EE   R   FK +  +  +H+       +G ++FSD
Sbjct: 44  DNDLELSSHFTSFVQRFGKTYKDAEEHAHRLSVFKANLRRARRHQLLDPSAEHGITKFSD 103

Query: 701 RSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 759
            +P E      G K S R++ R +        +L     DG +PD +DWR     GP  +
Sbjct: 104 LTPAEFRRTFLGLKTSRRSFLREIGGSAHDAPVL---PTDG-LPDDFDWRDHGAVGPVKN 159

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFE 810
           Q +CGSCW+FS +G LEG   + TGK+   S+ Q V+C  +C         +GC+G    
Sbjct: 160 QGSCGSCWSFSASGALEGANYLATGKMEVLSEQQFVDCDHECDPEEPDSCDAGCNGGLMT 219

Query: 811 PSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYK 869
            +  Y  ++ GLE EKDYPY   +G    C +DKSK+        +     E +   L K
Sbjct: 220 SAFSYLLKSGGLEREKDYPYTGRDG---TCKFDKSKIVASVQNFSVVSVDEEQIAANLVK 276

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIP 918
           +GPL++ +N+  +  Y G           PY     L H VLLVGYG       +  N P
Sbjct: 277 HGPLAIGINAAYMQTYIGG-------VSCPYICGRSLDHGVLLVGYGASGFAPSRLKNKP 329

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 950
           YW+++NSWG    ++G++KI RG+N    CG++ +
Sbjct: 330 YWVIKNSWGENWGEKGYYKICRGSNVRNKCGVDSM 364



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 166/335 (49%), Gaps = 47/335 (14%)

Query: 284 DNENILET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSD 334
           DN+  L + F +F+ + G+ Y + EE   R   FK +  +  +H+       +G ++FSD
Sbjct: 44  DNDLELSSHFTSFVQRFGKTYKDAEEHAHRLSVFKANLRRARRHQLLDPSAEHGITKFSD 103

Query: 335 RSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 393
            +P E      G K S R++ R +        +L     DG +PD +DWR     GP  +
Sbjct: 104 LTPAEFRRTFLGLKTSRRSFLREIGGSAHDAPVL---PTDG-LPDDFDWRDHGAVGPVKN 159

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDGLEQP 447
           Q +CGSCW+FS +G LEG   + TGK+   S+ Q V+C  +C      S   GC+G    
Sbjct: 160 QGSCGSCWSFSASGALEGANYLATGKMEVLSEQQFVDCDHECDPEEPDSCDAGCNGGLMT 219

Query: 448 IEYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYK 504
             +++     GLE EKDYPY   +G    C +DKSK+        +     E +   L K
Sbjct: 220 SAFSYLLKSGGLEREKDYPYTGRDG---TCKFDKSKIVASVQNFSVVSVDEEQIAANLVK 276

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIP 553
           +GPL++G+N+  +  Y G           PY     L H VLLVGYG       +  + P
Sbjct: 277 HGPLAIGINAAYMQTYIGG-------VSCPYICGRSLDHGVLLVGYGASGFAPSRLKNKP 329

Query: 554 YWLARNSWGPIGPDEGFFKIERGNNA---CGIEQI 585
           YW+ +NSWG    ++G++KI RG+N    CG++ +
Sbjct: 330 YWVIKNSWGENWGEKGYYKICRGSNVRNKCGVDSM 364



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 120/233 (51%), Gaps = 34/233 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR     GP  +Q  CGSCW+FS +G LEG   + TGK+   S+ Q V+C  +C
Sbjct: 142 LPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLATGKMEVLSEQQFVDCDHEC 201

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC+G     +  Y  ++ GLE EKDYPY   +G    C +DKSK+     
Sbjct: 202 DPEEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGRDG---TCKFDKSKIVASVQ 258

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K+GPL++ +N+  +  Y G           PY     L H VL
Sbjct: 259 NFSVVSVDEEQIAANLVKHGPLAIGINAAYMQTYIGG-------VSCPYICGRSLDHGVL 311

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 219
           LVGYG       +  N PYW+++NSWG    ++G++KI RG+N    CG++ +
Sbjct: 312 LVGYGASGFAPSRLKNKPYWVIKNSWGENWGEKGYYKICRGSNVRNKCGVDSM 364



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 10/59 (16%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    ++G++KI RG+N    CG++ +
Sbjct: 306  LDHGVLLVGYGASGFAPSRLKNKPYWVIKNSWGENWGEKGYYKICRGSNVRNKCGVDSM 364


>gi|215401412|ref|YP_002332715.1| cathepsin [Spodoptera litura nucleopolyhedrovirus II]
 gi|209483953|gb|ACI47386.1| cathepsin [Spodoptera litura nucleopolyhedrovirus II]
          Length = 337

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 158/315 (50%), Gaps = 34/315 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD----GHKKHER----YGTSEFSDRSPEEILCK 709
           F+ FI +  ++Y  ++E K R+  F+ +     HK        Y  + F+D +  E++ +
Sbjct: 40  FEKFIAQYNKKYKTEDEKKYRYNIFRHNMESINHKNSRNDSAIYKINRFADMTKNEVVIR 99

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 764
            TG           +A  E        +  DGP     P ++DWR  N      DQ  CG
Sbjct: 100 HTG-----------LASGELGANFCETIVVDGPAQRQRPTSFDWRTLNKVTSVKDQGMCG 148

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLES 823
           +CWAF+  G LE QYAIK  +L++ ++ QLV+C     GCDG     + E   H  G+E 
Sbjct: 149 ACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDSVDMGCDGGLIHTAYEQIMHMGGVEQ 208

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLI 882
           E DYPY+    E+  CA    K        + +     E ++ +L   GP+++ +++  +
Sbjct: 209 EFDYPYR---AERQPCALKPHKFAAGVRSCYRYVLLNEERLEDLLRYVGPIAIAVDAVDL 265

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
            DY G  +      C    L HAVLLVGYG ++N+P+W+++NSWG    ++G+ ++ RG 
Sbjct: 266 TDYYGGIV----SFCENNGLNHAVLLVGYGVENNVPFWIIKNSWGSDYGEDGYVRVRRGV 321

Query: 943 NACG-IEQIAGYATI 956
           N+CG I ++A  A +
Sbjct: 322 NSCGMINELASSAQV 336



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 154/316 (48%), Gaps = 35/316 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD----GHKKHER----YGTSEFSDRSPEEILCK 343
           F+ FI +  ++Y  ++E K R+  F+ +     HK        Y  + F+D +  E++ +
Sbjct: 40  FEKFIAQYNKKYKTEDEKKYRYNIFRHNMESINHKNSRNDSAIYKINRFADMTKNEVVIR 99

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 398
            TG           +A  E        +  DGP     P ++DWR  N      DQ  CG
Sbjct: 100 HTG-----------LASGELGANFCETIVVDGPAQRQRPTSFDWRTLNKVTSVKDQGMCG 148

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           +CWAF+  G LE QYAIK  +L++ ++ QLV+C     GC G        +  H  G+E 
Sbjct: 149 ACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDSVDMGCDGGLIHTAYEQIMHMGGVEQ 208

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGSETMKKILYKYGPLSVGLNS-HL 516
           E DYPYR    E+  CA    K        + Y     E ++ +L   GP+++ +++  L
Sbjct: 209 EFDYPYR---AERQPCALKPHKFAAGVRSCYRYVLLNEERLEDLLRYVGPIAIAVDAVDL 265

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
             +Y G         C    L HAVLLVGYG ++++P+W+ +NSWG    ++G+ ++ RG
Sbjct: 266 TDYYGGIV-----SFCENNGLNHAVLLVGYGVENNVPFWIIKNSWGSDYGEDGYVRVRRG 320

Query: 577 NNACG-IEQIAGYATI 591
            N+CG I ++A  A +
Sbjct: 321 VNSCGMINELASSAQV 336



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 14/225 (6%)

Query: 8   DGPV----PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           DGP     P ++DWR  N      DQ  CG+CWAF+  G LE QYAIK  +L++ ++ QL
Sbjct: 119 DGPAQRQRPTSFDWRTLNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQL 178

Query: 64  VECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           V+C     GCDG     + E   H  G+E E DYPY+    E+  CA    K        
Sbjct: 179 VDCDSVDMGCDGGLIHTAYEQIMHMGGVEQEFDYPYR---AERQPCALKPHKFAAGVRSC 235

Query: 123 FLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           + +     E ++ +L   GP+++ +++  + DY G  +      C    L HAVLLVGYG
Sbjct: 236 YRYVLLNEERLEDLLRYVGPIAIAVDAVDLTDYYGGIV----SFCENNGLNHAVLLVGYG 291

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
            ++N+P+W+++NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 292 VENNVPFWIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 336



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYAT 1023
            C    L HAVLLVGYG ++++P+W+++NSWG    ++G+ ++ RG N+CG I ++A  A 
Sbjct: 276  CENNGLNHAVLLVGYGVENNVPFWIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQ 335

Query: 1024 I 1024
            +
Sbjct: 336  V 336


>gi|20069912|ref|NP_613116.1| cathepsin [Mamestra configurata NPV-A]
 gi|37077373|sp|Q8QLK1.1|CATV_NPVMC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|20043306|gb|AAM09141.1| cathepsin [Mamestra configurata NPV-A]
 gi|33331744|gb|AAQ11052.1| putative cysteine proteinase [Mamestra configurata NPV-A]
          Length = 337

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 174/352 (49%), Gaps = 39/352 (11%)

Query: 621 LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFE 680
           L L S      DQVVA    + I+ +L   N   L  F+ FI +  +QY++++E K R+ 
Sbjct: 8   LLLVSAVLTSHDQVVA----VTIKPNLYNINSAPL-YFEKFISQYNKQYSSEDEKKYRYN 62

Query: 681 YFKQDG---HKKHER-----YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK 731
            F+ +    + K+ R     Y  + F+D +  E++ + TG            A  +    
Sbjct: 63  IFRHNIESINAKNSRNDSAVYKINRFADMTKNEVVNRHTGL-----------ASGDIGAN 111

Query: 732 MLMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLV 787
               +  DGP     P  +DWR  N      DQ  CG+CWAF+  G LE QYAIK  +L+
Sbjct: 112 FCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLI 171

Query: 788 EFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKV 846
           + ++ QLV+C     GCDG     + E   H  G+E E DYPYK     +  CA    K 
Sbjct: 172 DLAEQQLVDCDFVDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYK---AVRLPCAVKPHKF 228

Query: 847 KLFTGKDFLHFNGS-ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 905
            +     + +   S E ++ +L   GP+++ +++  + DY G  I      C    L HA
Sbjct: 229 AVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDLTDYYGGVI----SFCENNGLNHA 284

Query: 906 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 956
           VLLVGYG ++N+PYW ++NSWG    + G+ +I RG N+CG I ++A  A I
Sbjct: 285 VLLVGYGIENNVPYWTIKNSWGSDYGENGYVRIRRGVNSCGMINELASSAQI 336



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 170/353 (48%), Gaps = 40/353 (11%)

Query: 255 LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFE 314
           L L S      DQVVA    + I+ +L   N   L  F+ FI +  +QY++++E K R+ 
Sbjct: 8   LLLVSAVLTSHDQVVA----VTIKPNLYNINSAPL-YFEKFISQYNKQYSSEDEKKYRYN 62

Query: 315 YFKQDG---HKKHER-----YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK 365
            F+ +    + K+ R     Y  + F+D +  E++ + TG            A  +    
Sbjct: 63  IFRHNIESINAKNSRNDSAVYKINRFADMTKNEVVNRHTGL-----------ASGDIGAN 111

Query: 366 MLMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLV 421
               +  DGP     P  +DWR  N      DQ  CG+CWAF+  G LE QYAIK  +L+
Sbjct: 112 FCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLI 171

Query: 422 EFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKV 481
           + ++ QLV+C     GC G        +  H  G+E E DYPY+     +  CA    K 
Sbjct: 172 DLAEQQLVDCDFVDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYK---AVRLPCAVKPHKF 228

Query: 482 KLFTGKDFLYFNGS-ETMKKILYKYGPLSVGLNS-HLIHFYNGTPIRKNDETCSPYDLGH 539
            +     + Y   S E ++ +L   GP+++ +++  L  +Y G         C    L H
Sbjct: 229 AVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDLTDYYGGVI-----SFCENNGLNH 283

Query: 540 AVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 591
           AVLLVGYG ++++PYW  +NSWG    + G+ +I RG N+CG I ++A  A I
Sbjct: 284 AVLLVGYGIENNVPYWTIKNSWGSDYGENGYVRIRRGVNSCGMINELASSAQI 336



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 121/225 (53%), Gaps = 14/225 (6%)

Query: 8   DGP----VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           DGP     P  +DWR  N      DQ  CG+CWAF+  G LE QYAIK  +L++ ++ QL
Sbjct: 119 DGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQL 178

Query: 64  VECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           V+C     GCDG     + E   H  G+E E DYPYK     +  CA    K  +     
Sbjct: 179 VDCDFVDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYK---AVRLPCAVKPHKFAVGVRNC 235

Query: 123 FLHFNGS-ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           + +   S E ++ +L   GP+++ +++  + DY G  I      C    L HAVLLVGYG
Sbjct: 236 YRYVLLSEERLEDLLRHVGPIAIAVDAVDLTDYYGGVI----SFCENNGLNHAVLLVGYG 291

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
            ++N+PYW ++NSWG    + G+ +I RG N+CG I ++A  A I
Sbjct: 292 IENNVPYWTIKNSWGSDYGENGYVRIRRGVNSCGMINELASSAQI 336



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYAT 1023
            C    L HAVLLVGYG ++++PYW ++NSWG    + G+ +I RG N+CG I ++A  A 
Sbjct: 276  CENNGLNHAVLLVGYGIENNVPYWTIKNSWGSDYGENGYVRIRRGVNSCGMINELASSAQ 335

Query: 1024 I 1024
            I
Sbjct: 336  I 336


>gi|164605518|dbj|BAF98584.1| CM0216.500.nc [Lotus japonicus]
          Length = 360

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 151/322 (46%), Gaps = 47/322 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 709
           F  F  + G+ YA +EE   RF  FK + H+            +G + FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTRFSDLTPME---- 100

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CGSCW+F
Sbjct: 101 --FRHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWREHGAVTPVKNQGSCGSCWSF 155

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYT-HQA 819
           S  G LEG + + TG+LV  S+ QLV+C  QC         SGC+G     + EY  +  
Sbjct: 156 SATGALEGAHFLSTGELVSLSEQQLVDCDHQCDPEEAGSCDSGCNGGLMNSAFEYILNNG 215

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           G+  E+DYPY   NG    C +DK+K+        +     + +   L K GPL+V +N+
Sbjct: 216 GVMREEDYPYSGTNGG--TCKFDKAKIAASVANFSVVSRDEDQIAANLVKNGPLAVAINA 273

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQD-------NIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG +          PYW+++NSWG 
Sbjct: 274 VYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGE 326

Query: 929 IGPDEGFFKIERGNNACGIEQI 950
              + G++KI RG N CG++ +
Sbjct: 327 NWGENGYYKICRGRNICGVDSM 348



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 150/322 (46%), Gaps = 46/322 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 343
           F  F  + G+ YA +EE   RF  FK + H+            +G + FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTRFSDLTPME---- 100

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CGSCW+F
Sbjct: 101 --FRHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWREHGAVTPVKNQGSCGSCWSF 155

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYT-HQA 454
           S  G LEG + + TG+LV  S+ QLV+C  QC      S   GC+G  +    EY  +  
Sbjct: 156 SATGALEGAHFLSTGELVSLSEQQLVDCDHQCDPEEAGSCDSGCNGGLMNSAFEYILNNG 215

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           G+  E+DYPY   NG    C +DK+K+        +     + +   L K GPL+V +N+
Sbjct: 216 GVMREEDYPYSGTNGG--TCKFDKAKIAASVANFSVVSRDEDQIAANLVKNGPLAVAINA 273

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQD-------DIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG +          PYW+ +NSWG 
Sbjct: 274 VYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGE 326

Query: 564 IGPDEGFFKIERGNNACGIEQI 585
              + G++KI RG N CG++ +
Sbjct: 327 NWGENGYYKICRGRNICGVDSM 348



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 116/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+     P  +Q  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C  QC
Sbjct: 128 LPKDFDWREHGAVTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHQC 187

Query: 71  ---------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  +  G+  E+DYPY   NG    C +DK+K+     
Sbjct: 188 DPEEAGSCDSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNGG--TCKFDKAKIAASVA 245

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 246 NFSVVSRDEDQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYVCSKKLNHGVL 298

Query: 177 LVGYGKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 299 LVGYGSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSM 348



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYGKQD-------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 293  LNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSM 348


>gi|355681647|gb|AER96812.1| cathepsin F [Mustela putorius furo]
          Length = 408

 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 161/369 (43%), Gaps = 42/369 (11%)

Query: 253 SCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET--------------------- 291
           + LC   + D +   ++ R D   ++  +T D    L +                     
Sbjct: 52  TLLCSFEILDELGKHMLLRRDCGPVDTKVTDDKNETLSSVLPLLNKEPLPQDFSVKMASI 111

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           FK F+    R Y + EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 112 FKEFVTTYNRTYESKEETQWRMSVFSNNMMRAQKIQALDRGTAQYGVTKFSDLTEEEF-- 169

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                     Y   +    + + M ++       P  WDWR+K       +Q  CGSCWA
Sbjct: 170 -------RTIYLNPLLREYRGKNMRLDKSTGDSAPSEWDWRRKGAVTKVKNQGMCGSCWA 222

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           FS+ G +EGQ+ +K G L+  S+ +L++C K    C G              GLE+E DY
Sbjct: 223 FSVTGNVEGQWFLKQGALLSLSEQELLDCDKVDKACLGGLPSNAYSAIKTLGGLETEDDY 282

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
            YR   G    C +   K +++           ET+   L + GP+SV +N+  + FY  
Sbjct: 283 SYR---GRMQTCGFSPKKARVYINDSVELSQNEETLAAWLAEKGPISVAINAFGMQFYRH 339

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
                    CSP+ + HAVLLVGYG +   P+W  +NSWG    +EG++ + RG+ ACG+
Sbjct: 340 GISHPLRPLCSPWLIDHAVLLVGYGNRSGTPFWAIKNSWGSDWGEEGYYYLHRGSGACGV 399

Query: 583 EQIAGYATI 591
             +A  A +
Sbjct: 400 NTMASSAVV 408



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 165/371 (44%), Gaps = 47/371 (12%)

Query: 619 SCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET--------------------- 657
           + LC   + D +   ++ R D   ++  +T D    L +                     
Sbjct: 52  TLLCSFEILDELGKHMLLRRDCGPVDTKVTDDKNETLSSVLPLLNKEPLPQDFSVKMASI 111

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           FK F+    R Y + EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 112 FKEFVTTYNRTYESKEETQWRMSVFSNNMMRAQKIQALDRGTAQYGVTKFSDLTEEEF-- 169

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                     Y   +    + + M ++       P  WDWR+K       +Q  CGSCWA
Sbjct: 170 -------RTIYLNPLLREYRGKNMRLDKSTGDSAPSEWDWRRKGAVTKVKNQGMCGSCWA 222

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEK 825
           FS+ G +EGQ+ +K G L+  S+ +L++C K    C G    PS  Y+      GLE+E 
Sbjct: 223 FSVTGNVEGQWFLKQGALLSLSEQELLDCDKVDKACLGGL--PSNAYSAIKTLGGLETED 280

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DY Y+   G    C +   K +++           ET+   L + GP+SV +N+  +  Y
Sbjct: 281 DYSYR---GRMQTCGFSPKKARVYINDSVELSQNEETLAAWLAEKGPISVAINAFGMQFY 337

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                      CSP+ + HAVLLVGYG +   P+W ++NSWG    +EG++ + RG+ AC
Sbjct: 338 RHGISHPLRPLCSPWLIDHAVLLVGYGNRSGTPFWAIKNSWGSDWGEEGYYYLHRGSGAC 397

Query: 946 GIEQIAGYATI 956
           G+  +A  A +
Sbjct: 398 GVNTMASSAVV 408



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 118/228 (51%), Gaps = 8/228 (3%)

Query: 1   MLMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
           M ++       P  WDWR+K       +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+
Sbjct: 186 MRLDKSTGDSAPSEWDWRRKGAVTKVKNQGMCGSCWAFSVTGNVEGQWFLKQGALLSLSE 245

Query: 61  SQLVECAKQCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKL 117
            +L++C K    C G    PS  Y+      GLE+E DY Y+   G    C +   K ++
Sbjct: 246 QELLDCDKVDKACLGGL--PSNAYSAIKTLGGLETEDDYSYR---GRMQTCGFSPKKARV 300

Query: 118 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
           +           ET+   L + GP+SV +N+  +  Y           CSP+ + HAVLL
Sbjct: 301 YINDSVELSQNEETLAAWLAEKGPISVAINAFGMQFYRHGISHPLRPLCSPWLIDHAVLL 360

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           VGYG +   P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 361 VGYGNRSGTPFWAIKNSWGSDWGEEGYYYLHRGSGACGVNTMASSAVV 408



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 41/60 (68%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +   P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 349  CSPWLIDHAVLLVGYGNRSGTPFWAIKNSWGSDWGEEGYYYLHRGSGACGVNTMASSAVV 408


>gi|13625989|gb|AAK35220.1|AF362769_1 pre-procathepsin L [Paragonimus westermani]
          Length = 235

 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 123/231 (53%), Gaps = 5/231 (2%)

Query: 361 EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKL 420
           E+V+++ +   +  P   + DWRKK   GP   Q +CGSCWAFS+   +EGQ+ +KTG+L
Sbjct: 9   ERVDRVQLNDLQTAPA--SVDWRKKGAVGPVEHQGSCGSCWAFSVTANVEGQWFLKTGRL 66

Query: 421 VEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSK 480
           V  SK QLV+C +   GC G        E     GLE +  YPY    G +  C  D+SK
Sbjct: 67  VSLSKQQLVDCDRLDHGCSGGYPPYTYKEIKRMGGLELQSAYPY---TGWEQACRLDRSK 123

Query: 481 VKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHA 540
           +        +     E     L ++GP+S  LN+  + FY    +  ++  CSP  L HA
Sbjct: 124 LFAKIDDSIVLEKNEEKQAAWLAEHGPMSTCLNAGPLQFYRYGILHPSEYACSPEGLNHA 183

Query: 541 VLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           VL VGY  +  +PYW  RNSWG    + G+F+I RG+  CGI+++   A I
Sbjct: 184 VLTVGYDTERGVPYWTVRNSWGTRWGENGYFRIYRGDGTCGIDRLTTSAII 234



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 125/231 (54%), Gaps = 6/231 (2%)

Query: 727 EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKL 786
           E+V+++ +   +  P   + DWRKK   GP   Q +CGSCWAFS+   +EGQ+ +KTG+L
Sbjct: 9   ERVDRVQLNDLQTAPA--SVDWRKKGAVGPVEHQGSCGSCWAFSVTANVEGQWFLKTGRL 66

Query: 787 VEFSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSK 845
           V  SK QLV+C +   GC G +   +  E     GLE +  YPY    G +  C  D+SK
Sbjct: 67  VSLSKQQLVDCDRLDHGCSGGYPPYTYKEIKRMGGLELQSAYPY---TGWEQACRLDRSK 123

Query: 846 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 905
           +        +     E     L ++GP+S  LN+  +  Y    +  ++  CSP  L HA
Sbjct: 124 LFAKIDDSIVLEKNEEKQAAWLAEHGPMSTCLNAGPLQFYRYGILHPSEYACSPEGLNHA 183

Query: 906 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           VL VGY  +  +PYW VRNSWG    + G+F+I RG+  CGI+++   A I
Sbjct: 184 VLTVGYDTERGVPYWTVRNSWGTRWGENGYFRIYRGDGTCGIDRLTTSAII 234



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 116/216 (53%), Gaps = 4/216 (1%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P + DWRKK   GP   Q  CGSCWAFS+   +EGQ+ +KTG+LV  SK QLV+C +  
Sbjct: 22  APASVDWRKKGAVGPVEHQGSCGSCWAFSVTANVEGQWFLKTGRLVSLSKQQLVDCDRLD 81

Query: 71  SGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC G +   +  E     GLE +  YPY    G +  C  D+SK+        +     
Sbjct: 82  HGCSGGYPPYTYKEIKRMGGLELQSAYPY---TGWEQACRLDRSKLFAKIDDSIVLEKNE 138

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           E     L ++GP+S  LN+  +  Y    +  ++  CSP  L HAVL VGY  +  +PYW
Sbjct: 139 EKQAAWLAEHGPMSTCLNAGPLQFYRYGILHPSEYACSPEGLNHAVLTVGYDTERGVPYW 198

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            VRNSWG    + G+F+I RG+  CGI+++   A I
Sbjct: 199 TVRNSWGTRWGENGYFRIYRGDGTCGIDRLTTSAII 234



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 961  NDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 1020
            ++  CSP  L HAVL VGY  +  +PYW VRNSWG    + G+F+I RG+  CGI+++  
Sbjct: 171  SEYACSPEGLNHAVLTVGYDTERGVPYWTVRNSWGTRWGENGYFRIYRGDGTCGIDRLTT 230

Query: 1021 YATI 1024
             A I
Sbjct: 231  SAII 234


>gi|330376140|gb|AEC13302.1| cathepsin H [Gallus gallus]
          Length = 329

 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/313 (35%), Positives = 155/313 (49%), Gaps = 30/313 (9%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTS-------EFSDRSPEEILC 708
           + FKA++++ GR+Y   E  +    +     H +    G S       +FSD +  E   
Sbjct: 27  QLFKAWMLQHGRRYGAGEYERRLRVFVGNKRHIEGHNAGNSSFQMALNQFSDMTFAEF-- 84

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCW 767
           K  + WSE   +   A R         +  DGP P+A DWRKK N   P  +Q  CGSCW
Sbjct: 85  KKLYLWSEP--QNCSATRGNF------LRSDGPCPEAVDWRKKGNFVTPVKNQGPCGSCW 136

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESE 824
            FS  G LE   AI TGKL+  ++  LV+CA+  +  GC G     + EY  +  GL  E
Sbjct: 137 TFSTTGCLESAIAIATGKLLSLAEQLLVDCAQAFNNHGCSGGLPSQAFEYILYNKGLMGE 196

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET--MKKILYKYGPLSVL--LNSD 880
             YPY+  NG    C +   K   F  KD ++    +   M + + K+ P+S    + SD
Sbjct: 197 DAYPYRAQNG---TCKFQPDKAIAFV-KDVINITQYDEAGMVEAVGKHNPVSFAFEVTSD 252

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +H   G       E  +P  + HAVL VGYG++D  PYW+V+NSWGP+   +G+F IER
Sbjct: 253 FMHYRKGVYSNPRCEH-TPDKVNHAVLAVGYGEEDGRPYWIVKNSWGPLWGMDGYFLIER 311

Query: 941 GNNACGIEQIAGY 953
           G N CG+   A Y
Sbjct: 312 GKNMCGLAACASY 324



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/313 (35%), Positives = 153/313 (48%), Gaps = 29/313 (9%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTS-------EFSDRSPEEILC 342
           + FKA++++ GR+Y   E  +    +     H +    G S       +FSD +  E   
Sbjct: 27  QLFKAWMLQHGRRYGAGEYERRLRVFVGNKRHIEGHNAGNSSFQMALNQFSDMTFAEF-- 84

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCW 401
           K  + WSE   +   A R         +  DGP P+A DWRKK N   P  +Q  CGSCW
Sbjct: 85  KKLYLWSEP--QNCSATRGNF------LRSDGPCPEAVDWRKKGNFVTPVKNQGPCGSCW 136

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESE 459
            FS  G LE   AI TGKL+  ++  LV+CA+  +  G   GL  Q  EY  +  GL  E
Sbjct: 137 TFSTTGCLESAIAIATGKLLSLAEQLLVDCAQAFNNHGCSGGLPSQAFEYILYNKGLMGE 196

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET--MKKILYKYGPLSVG--LNSH 515
             YPYR  NG    C +   K   F  KD +     +   M + + K+ P+S    + S 
Sbjct: 197 DAYPYRAQNG---TCKFQPDKAIAFV-KDVINITQYDEAGMVEAVGKHNPVSFAFEVTSD 252

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            +H+  G       E  +P  + HAVL VGYG++D  PYW+ +NSWGP+   +G+F IER
Sbjct: 253 FMHYRKGVYSNPRCEH-TPDKVNHAVLAVGYGEEDGRPYWIVKNSWGPLWGMDGYFLIER 311

Query: 576 GNNACGIEQIAGY 588
           G N CG+   A Y
Sbjct: 312 GKNMCGLAACASY 324



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 122/226 (53%), Gaps = 13/226 (5%)

Query: 5   VEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           +  DGP P+A DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL+  ++  L
Sbjct: 104 LRSDGPCPEAVDWRKKGNFVTPVKNQGPCGSCWTFSTTGCLESAIAIATGKLLSLAEQLL 163

Query: 64  VECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           V+CA+  +  GC G     + EY  +  GL  E  YPY+  NG    C +   K   F  
Sbjct: 164 VDCAQAFNNHGCSGGLPSQAFEYILYNKGLMGEDAYPYRAQNG---TCKFQPDKAIAFV- 219

Query: 121 KDFLHFNGSET--MKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 176
           KD ++    +   M + + K+ P+S    + SD +H   G       E  +P  + HAVL
Sbjct: 220 KDVINITQYDEAGMVEAVGKHNPVSFAFEVTSDFMHYRKGVYSNPRCEH-TPDKVNHAVL 278

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
            VGYG++D  PYW+V+NSWGP+   +G+F IERG N CG+   A Y
Sbjct: 279 AVGYGEEDGRPYWIVKNSWGPLWGMDGYFLIERGKNMCGLAACASY 324



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 40/56 (71%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG++D  PYW+V+NSWGP+   +G+F IERG N CG+   A Y
Sbjct: 269  TPDKVNHAVLAVGYGEEDGRPYWIVKNSWGPLWGMDGYFLIERGKNMCGLAACASY 324


>gi|4678299|emb|CAB41090.1| cysteine proteinase precursor-like protein [Arabidopsis thaliana]
          Length = 363

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 174/364 (47%), Gaps = 58/364 (15%)

Query: 633 QVVARVDTLAIEGSLTFDNE----NILET-----FKAFIVKRGRQYANDEEIKERFEYFK 683
            VVA V+ L I   +T DN     N+L T     F+ F+   G+ Y+  EE   R   F 
Sbjct: 18  HVVASVEDLTIR-QVTADNRRIRPNLLGTHTESKFRLFMSDYGKNYSTREEYIHRLGIFA 76

Query: 684 QDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE-KVEKMLM 734
           ++  K  E         +G ++FSD + EE      FK        +   R   V     
Sbjct: 77  KNVLKAAEHQMMDPSAVHGVTQFSDLTEEE------FKRMYTGVADVGGSRGGTVGAEAP 130

Query: 735 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 794
            VE DG +P+ +DWR+K       +Q ACGSCWAFS  G  EG + + TGKL+  S+ QL
Sbjct: 131 MVEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQL 189

Query: 795 VEC----AKQC-SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKL 848
           V+C     K C +GC G     + EY  +A GLE E+ YPY    G++  C +D  KV +
Sbjct: 190 VDCDQADKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPY---TGKRGHCKFDPEKVAV 246

Query: 849 FTGKDFLHFNG----SETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYD 901
                 L+F         +   L ++GPL+V LN+  +  Y G    P+      CS  +
Sbjct: 247 ----RVLNFTTIPLDENQIAANLVRHGPLAVGLNAVFMQTYIGGVSCPL-----ICSKRN 297

Query: 902 LGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 954
           + H VLLVGYG +        N PYW+++NSWG    + G++K+ RG++ CGI  +    
Sbjct: 298 VNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSMVSAV 357

Query: 955 TIDV 958
              V
Sbjct: 358 ATQV 361



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 172/361 (47%), Gaps = 51/361 (14%)

Query: 267 QVVARVDTLAIEGSLTFDNE----NILET-----FKAFIVKRGRQYANDEEIKERFEYFK 317
            VVA V+ L I   +T DN     N+L T     F+ F+   G+ Y+  EE   R   F 
Sbjct: 18  HVVASVEDLTIR-QVTADNRRIRPNLLGTHTESKFRLFMSDYGKNYSTREEYIHRLGIFA 76

Query: 318 QDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE-KVEKMLM 368
           ++  K  E         +G ++FSD + EE      FK        +   R   V     
Sbjct: 77  KNVLKAAEHQMMDPSAVHGVTQFSDLTEEE------FKRMYTGVADVGGSRGGTVGAEAP 130

Query: 369 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 428
            VE DG +P+ +DWR+K       +Q ACGSCWAFS  G  EG + + TGKL+  S+ QL
Sbjct: 131 MVEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQL 189

Query: 429 VEC----AKQC-SGCGGCDGLEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVK 482
           V+C     K C +GCGG   +    EY  +A GLE E+ YPY    G++  C +D  KV 
Sbjct: 190 VDCDQADKKACDNGCGG-GLMTNAYEYLMEAGGLEEERSYPY---TGKRGHCKFDPEKVA 245

Query: 483 LFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG---TPIRKNDETCSPYDLGH 539
           +              +   L ++GPL+VGLN+  +  Y G    P+      CS  ++ H
Sbjct: 246 VRVLNFTTIPLDENQIAANLVRHGPLAVGLNAVFMQTYIGGVSCPL-----ICSKRNVNH 300

Query: 540 AVLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
            VLLVGYG +        + PYW+ +NSWG    + G++K+ RG++ CGI  +       
Sbjct: 301 GVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSMVSAVATQ 360

Query: 593 V 593
           V
Sbjct: 361 V 361



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 127/243 (52%), Gaps = 33/243 (13%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           VE DG +P+ +DWR+K       +Q  CGSCWAFS  G  EG + + TGKL+  S+ QLV
Sbjct: 132 VEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQLV 190

Query: 65  EC----AKQC-SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
           +C     K C +GC G     + EY  +A GLE E+ YPY    G++  C +D  KV + 
Sbjct: 191 DCDQADKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPY---TGKRGHCKFDPEKVAV- 246

Query: 119 TGKDFLHFNG----SETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDL 171
                L+F         +   L ++GPL+V LN+  +  Y G    P+      CS  ++
Sbjct: 247 ---RVLNFTTIPLDENQIAANLVRHGPLAVGLNAVFMQTYIGGVSCPL-----ICSKRNV 298

Query: 172 GHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
            H VLLVGYG +        N PYW+++NSWG    + G++K+ RG++ CGI  +     
Sbjct: 299 NHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSMVSAVA 358

Query: 225 IDV 227
             V
Sbjct: 359 TQV 361


>gi|161778780|gb|ABX79341.1| cysteine protease [Vitis vinifera]
          Length = 377

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 172/368 (46%), Gaps = 57/368 (15%)

Query: 628 DRITDQVVARVDTLAIEGSLTFDNENILET----FKAFIVKRGRQYANDEEIKERFEYFK 683
           D I  QVV  +    +EG    + EN+L      F  F  + G+ YA+ EE   RF+ FK
Sbjct: 33  DIIIRQVVPELGD--VEGG---EEENLLTADHHHFSIFKRRFGKSYASQEEHDYRFKVFK 87

Query: 684 QDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 735
            +  +  +H++      +G ++FSD +P E            TY  +   +   +     
Sbjct: 88  ANLRRARRHQQLDPSATHGVTQFSDLTPAEF---------RGTYLGLRPLKLPHDAQKAP 138

Query: 736 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 795
           +     +P+ +DWR         +Q +CGSCW+FS  G LEG   + TG LV  S+ QLV
Sbjct: 139 ILPTNDLPEDFDWRDHGAVTAVKNQGSCGSCWSFSTTGALEGANFLATGNLVSLSEQQLV 198

Query: 796 ECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK 845
           EC  +C         SGC+G     + EYT +A GL  E+DYPY     ++  C +DK+K
Sbjct: 199 ECDHECDPEEMGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYTGT--DRGSCKFDKTK 256

Query: 846 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----D 901
           +        +     + +   L K GPL+V +N+  +  Y G           PY     
Sbjct: 257 IAASVSNFSVISLDEDQIAANLVKIGPLAVAINAVFMQTYVGG-------VSCPYICSKR 309

Query: 902 LGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGY 953
           L H VLLVGYG       +  + PYW+++NSWG    + GF+KI RG N CG++  ++  
Sbjct: 310 LDHGVLLVGYGSAGYAPIRMKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSMVSTV 369

Query: 954 ATIDVVKN 961
           A +    N
Sbjct: 370 AAVHTTSN 377



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 167/356 (46%), Gaps = 55/356 (15%)

Query: 262 DRITDQVVARVDTLAIEGSLTFDNENILET----FKAFIVKRGRQYANDEEIKERFEYFK 317
           D I  QVV  +    +EG    + EN+L      F  F  + G+ YA+ EE   RF+ FK
Sbjct: 33  DIIIRQVVPELGD--VEGG---EEENLLTADHHHFSIFKRRFGKSYASQEEHDYRFKVFK 87

Query: 318 QDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 369
            +  +  +H++      +G ++FSD +P E            TY  +   +   +     
Sbjct: 88  ANLRRARRHQQLDPSATHGVTQFSDLTPAEF---------RGTYLGLRPLKLPHDAQKAP 138

Query: 370 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 429
           +     +P+ +DWR         +Q +CGSCW+FS  G LEG   + TG LV  S+ QLV
Sbjct: 139 ILPTNDLPEDFDWRDHGAVTAVKNQGSCGSCWSFSTTGALEGANFLATGNLVSLSEQQLV 198

Query: 430 ECAKQC------SGCGGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSK 480
           EC  +C      S   GC+G  +    EYT +A GL  E+DYPY     ++  C +DK+K
Sbjct: 199 ECDHECDPEEMGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYT--GTDRGSCKFDKTK 256

Query: 481 VKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----D 536
           +        +     + +   L K GPL+V +N+  +  Y G           PY     
Sbjct: 257 IAASVSNFSVISLDEDQIAANLVKIGPLAVAINAVFMQTYVGG-------VSCPYICSKR 309

Query: 537 LGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           L H VLLVGYG       +  D PYW+ +NSWG    + GF+KI RG N CG++ +
Sbjct: 310 LDHGVLLVGYGSAGYAPIRMKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSM 365



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 116/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR         +Q  CGSCW+FS  G LEG   + TG LV  S+ QLVEC  +C
Sbjct: 145 LPEDFDWRDHGAVTAVKNQGSCGSCWSFSTTGALEGANFLATGNLVSLSEQQLVECDHEC 204

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY     ++  C +DK+K+     
Sbjct: 205 DPEEMGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYTGT--DRGSCKFDKTKIAASVS 262

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 263 NFSVISLDEDQIAANLVKIGPLAVAINAVFMQTYVGG-------VSCPYICSKRLDHGVL 315

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +  + PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 316 LVGYGSAGYAPIRMKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSM 365



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  D PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 310  LDHGVLLVGYGSAGYAPIRMKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSM 365


>gi|45822207|emb|CAE47500.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 326

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 164/318 (51%), Gaps = 29/318 (9%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHE------RYGTSEFSDRSP 703
           E +  F V+  + Y N  E ++RF  F+      ++ + K++      + G ++F+D + 
Sbjct: 21  EEWVQFKVRNNKSYRNYIEEQKRFTIFQGSLRKIENHNDKYDHGLSTFKLGVTKFADLTE 80

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           +E     G   S ++       R +V   L  V+    +P  +DWR+K       DQ +C
Sbjct: 81  KEFSDMLGISRSTKS------SRPRVIHSLTPVK---DLPSKFDWREKGAVTEVKDQGSC 131

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ-CSGCDGCFFEPSIEYTHQA-GL 821
           GSCW+FS  G +EG Y +KTGKLV  S+  LV+CAK+ C GC G + + ++EY   A G+
Sbjct: 132 GSCWSFSTTGTVEGAYFLKTGKLVSLSEQNLVDCAKEDCYGCSGGYMDKALEYIETAGGI 191

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
            SE DYPY+   G   KC +D SKV    +   ++  N  + +K  +   GP+SV +++ 
Sbjct: 192 MSENDYPYE---GIDDKCRFDSSKVAAKISNFTYIKKNDEDDLKNAVIAKGPISVAIDAS 248

Query: 881 LIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
                  + I  +    S ++ L H VL+VGYG +    YW+V+NSWG     +G+  + 
Sbjct: 249 FNFQLYDSGILDDSSCYSDFNSLNHGVLVVGYGTEKEQDYWIVKNSWGADWGMDGYIWMS 308

Query: 940 RG-NNACGIEQIAGYATI 956
           R  NN CGI   A Y TI
Sbjct: 309 RNKNNQCGIATDATYPTI 326



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 167/323 (51%), Gaps = 38/323 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHE------RYGTSEFSDRSP 337
           E +  F V+  + Y N  E ++RF  F+      ++ + K++      + G ++F+D + 
Sbjct: 21  EEWVQFKVRNNKSYRNYIEEQKRFTIFQGSLRKIENHNDKYDHGLSTFKLGVTKFADLTE 80

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           +E     G   S ++       R +V   L  V+    +P  +DWR+K       DQ +C
Sbjct: 81  KEFSDMLGISRSTKS------SRPRVIHSLTPVK---DLPSKFDWREKGAVTEVKDQGSC 131

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQA- 454
           GSCW+FS  G +EG Y +KTGKLV  S+  LV+CAK+   C GC G  +++ +EY   A 
Sbjct: 132 GSCWSFSTTGTVEGAYFLKTGKLVSLSEQNLVDCAKE--DCYGCSGGYMDKALEYIETAG 189

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF--NGSETMKKILYKYGPLSVGL 512
           G+ SE DYPY    G   KC +D SKV      +F Y   N  + +K  +   GP+SV +
Sbjct: 190 GIMSENDYPYE---GIDDKCRFDSSKVAAKIS-NFTYIKKNDEDDLKNAVIAKGPISVAI 245

Query: 513 NSHL-IHFYNGTPIRKNDETC-SPYD-LGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEG 569
           ++      Y+   +  +D +C S ++ L H VL+VGYG + +  YW+ +NSWG     +G
Sbjct: 246 DASFNFQLYDSGIL--DDSSCYSDFNSLNHGVLVVGYGTEKEQDYWIVKNSWGADWGMDG 303

Query: 570 FFKIERG-NNACGIEQIAGYATI 591
           +  + R  NN CGI   A Y TI
Sbjct: 304 YIWMSRNKNNQCGIATDATYPTI 326



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/220 (38%), Positives = 122/220 (55%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P  +DWR+K       DQ  CGSCW+FS  G +EG Y +KTGKLV  S+  LV+CAK+ 
Sbjct: 110 LPSKFDWREKGAVTEVKDQGSCGSCWSFSTTGTVEGAYFLKTGKLVSLSEQNLVDCAKED 169

Query: 70  CSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFN 127
           C GC G + + ++EY   A G+ SE DYPY+   G   KC +D SKV    +   ++  N
Sbjct: 170 CYGCSGGYMDKALEYIETAGGIMSENDYPYE---GIDDKCRFDSSKVAAKISNFTYIKKN 226

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNI 186
             + +K  +   GP+SV +++        + I  +    S ++ L H VL+VGYG +   
Sbjct: 227 DEDDLKNAVIAKGPISVAIDASFNFQLYDSGILDDSSCYSDFNSLNHGVLVVGYGTEKEQ 286

Query: 187 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            YW+V+NSWG     +G+  + R  NN CGI   A Y TI
Sbjct: 287 DYWIVKNSWGADWGMDGYIWMSRNKNNQCGIATDATYPTI 326


>gi|209170907|ref|YP_002268053.1| agip23 [Agrotis ipsilon multiple nucleopolyhedrovirus]
 gi|208436498|gb|ACI28725.1| viral cathepsin [Agrotis ipsilon multiple nucleopolyhedrovirus]
          Length = 364

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 174/354 (49%), Gaps = 36/354 (10%)

Query: 619 SCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER 678
           S L L  ++  +T Q  A V T  I+ +L   N   L  F+ FI +  + Y N++E K R
Sbjct: 30  SLLFLLLVSTALTRQNDA-VHTPTIKPTLYNINSAPL-YFEKFISQYNKHYKNEDEKKYR 87

Query: 679 FEYFKQD----GHKKHER----YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKV 729
           +  F+ +     HK        Y  + F+D +  E++ + TG           +A  E  
Sbjct: 88  YNIFRHNIESINHKNSRNDSAVYKINRFADMTKNEVVIRHTG-----------LASGELG 136

Query: 730 EKMLMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 785
                 +  DGP     P ++DWR  N      DQ  CG+CWAF+  G LE QYAIK  +
Sbjct: 137 VNFCETIVVDGPGQRQRPTSFDWRTLNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDR 196

Query: 786 LVEFSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKS 844
           L++ S+ QLV+C     GCDG     +  E     G+E + DYPY+    E+  CA    
Sbjct: 197 LIDLSEQQLVDCDHVDMGCDGGLIHTAYEEIMRMGGVEQDFDYPYR---AERQPCALKPH 253

Query: 845 KVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 903
           K        + +     E ++ +L   GP+++ +++  I DY G  +      C    L 
Sbjct: 254 KFAAGVRSCYRYVLLNEERLEDLLRHVGPIAIAVDAVDITDYYGGIV----SFCENNGLN 309

Query: 904 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 956
           HAVLLVGYG ++N+PYW+++NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 310 HAVLLVGYGVENNVPYWILKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 363



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 172/356 (48%), Gaps = 39/356 (10%)

Query: 253 SCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER 312
           S L L  ++  +T Q  A V T  I+ +L   N   L  F+ FI +  + Y N++E K R
Sbjct: 30  SLLFLLLVSTALTRQNDA-VHTPTIKPTLYNINSAPL-YFEKFISQYNKHYKNEDEKKYR 87

Query: 313 FEYFKQD----GHKKHER----YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKV 363
           +  F+ +     HK        Y  + F+D +  E++ + TG           +A  E  
Sbjct: 88  YNIFRHNIESINHKNSRNDSAVYKINRFADMTKNEVVIRHTG-----------LASGELG 136

Query: 364 EKMLMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 419
                 +  DGP     P ++DWR  N      DQ  CG+CWAF+  G LE QYAIK  +
Sbjct: 137 VNFCETIVVDGPGQRQRPTSFDWRTLNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDR 196

Query: 420 LVEFSKSQLVECAKQCSGCGGCDGLEQPI--EYTHQAGLESEKDYPYRNGNGEKFKCAYD 477
           L++ S+ QLV+C     GC G  GL      E     G+E + DYPYR    E+  CA  
Sbjct: 197 LIDLSEQQLVDCDHVDMGCDG--GLIHTAYEEIMRMGGVEQDFDYPYR---AERQPCALK 251

Query: 478 KSKVKLFTGKDFLY-FNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYD 536
             K        + Y     E ++ +L   GP+++ +++  I  Y G  +      C    
Sbjct: 252 PHKFAAGVRSCYRYVLLNEERLEDLLRHVGPIAIAVDAVDITDYYGGIV----SFCENNG 307

Query: 537 LGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 591
           L HAVLLVGYG ++++PYW+ +NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 308 LNHAVLLVGYGVENNVPYWILKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 363



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 122/225 (54%), Gaps = 14/225 (6%)

Query: 8   DGP----VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           DGP     P ++DWR  N      DQ  CG+CWAF+  G LE QYAIK  +L++ S+ QL
Sbjct: 146 DGPGQRQRPTSFDWRTLNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLSEQQL 205

Query: 64  VECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           V+C     GCDG     +  E     G+E + DYPY+    E+  CA    K        
Sbjct: 206 VDCDHVDMGCDGGLIHTAYEEIMRMGGVEQDFDYPYR---AERQPCALKPHKFAAGVRSC 262

Query: 123 FLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           + +     E ++ +L   GP+++ +++  I DY G  +      C    L HAVLLVGYG
Sbjct: 263 YRYVLLNEERLEDLLRHVGPIAIAVDAVDITDYYGGIV----SFCENNGLNHAVLLVGYG 318

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
            ++N+PYW+++NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 319 VENNVPYWILKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 363



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYAT 1023
            C    L HAVLLVGYG ++++PYW+++NSWG    ++G+ ++ RG N+CG I ++A  A 
Sbjct: 303  CENNGLNHAVLLVGYGVENNVPYWILKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQ 362

Query: 1024 I 1024
            +
Sbjct: 363  V 363


>gi|290997496|ref|XP_002681317.1| cysteine protease [Naegleria gruberi]
 gi|284094941|gb|EFC48573.1| cysteine protease [Naegleria gruberi]
          Length = 350

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 155/324 (47%), Gaps = 34/324 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEILCK 709
           F  F  K  + Y  ++  K R++ FK +  K        K E +G S+F D +PEE   K
Sbjct: 36  FVKFSKKHAKLYGAEDHGK-RYQIFKSNVEKARYYNHVGKRETFGVSKFMDLTPEEF--K 92

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F     T E         ++ ++  ++    P +WDWR+K    P  +Q ACGSCW F
Sbjct: 93  RMFLMKTYTPEEARKILAAPKEAVVTAQQVKDTPTSWDWRQKGAVTPVKNQGACGSCWTF 152

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC----------SGCDGCFFEPSIEYT-HQ 818
           S  G +EG + IKTGKLV  S+ QLV+C   C          +GC+G     + +Y    
Sbjct: 153 STTGNVEGIHQIKTGKLVSLSEQQLVDCDHNCVTYQGQQACDAGCNGGLMWSAFQYVIKT 212

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLL 877
            GL +E  YPY+  +     C ++KS V + T   +      E  M   L   GP+S+ +
Sbjct: 213 GGLVTEDSYPYEGVDD---TCRFNKSNVAV-TINSWTSIPSDEGKMAAWLAANGPISIAI 268

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI-----PYWLVRNSWGPIGPD 932
           N++ +  Y  T    N   C+P DL H VL+VG+G   N       YW+++NSWG    +
Sbjct: 269 NAEWLQTY--TSGISNPWFCNPQDLDHGVLIVGFGTGSNWLGEKEDYWIIKNSWGADWGE 326

Query: 933 EGFFKIERGNNACGIEQIAGYATI 956
            G+F+I RG   CG+  +   + I
Sbjct: 327 SGYFRIVRGKGKCGLNSVPSSSLI 350



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 150/323 (46%), Gaps = 31/323 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEILCK 343
           F  F  K  + Y  ++  K R++ FK +  K        K E +G S+F D +PEE   K
Sbjct: 36  FVKFSKKHAKLYGAEDHGK-RYQIFKSNVEKARYYNHVGKRETFGVSKFMDLTPEEF--K 92

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F     T E         ++ ++  ++    P +WDWR+K    P  +Q ACGSCW F
Sbjct: 93  RMFLMKTYTPEEARKILAAPKEAVVTAQQVKDTPTSWDWRQKGAVTPVKNQGACGSCWTF 152

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGC-GGCDG--LEQPIEYT-HQ 453
           S  G +EG + IKTGKLV  S+ QLV+C   C        C  GC+G  +    +Y    
Sbjct: 153 STTGNVEGIHQIKTGKLVSLSEQQLVDCDHNCVTYQGQQACDAGCNGGLMWSAFQYVIKT 212

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
            GL +E  YPY    G    C ++KS V +         +    M   L   GP+S+ +N
Sbjct: 213 GGLVTEDSYPYE---GVDDTCRFNKSNVAVTINSWTSIPSDEGKMAAWLAANGPISIAIN 269

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI-----PYWLARNSWGPIGPDE 568
           +  +  Y  T    N   C+P DL H VL+VG+G   +       YW+ +NSWG    + 
Sbjct: 270 AEWLQTY--TSGISNPWFCNPQDLDHGVLIVGFGTGSNWLGEKEDYWIIKNSWGADWGES 327

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+F+I RG   CG+  +   + I
Sbjct: 328 GYFRIVRGKGKCGLNSVPSSSLI 350



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 117/232 (50%), Gaps = 23/232 (9%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P +WDWR+K    P  +Q  CGSCW FS  G +EG + IKTGKLV  S+ QLV+C   C
Sbjct: 125 TPTSWDWRQKGAVTPVKNQGACGSCWTFSTTGNVEGIHQIKTGKLVSLSEQQLVDCDHNC 184

Query: 71  ----------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
                     +GC+G     + +Y     GL +E  YPY+  +     C ++KS V + T
Sbjct: 185 VTYQGQQACDAGCNGGLMWSAFQYVIKTGGLVTEDSYPYEGVDD---TCRFNKSNVAV-T 240

Query: 120 GKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 178
              +      E  M   L   GP+S+ +N++ +  Y  T    N   C+P DL H VL+V
Sbjct: 241 INSWTSIPSDEGKMAAWLAANGPISIAINAEWLQTY--TSGISNPWFCNPQDLDHGVLIV 298

Query: 179 GYGKQDNI-----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           G+G   N       YW+++NSWG    + G+F+I RG   CG+  +   + I
Sbjct: 299 GFGTGSNWLGEKEDYWIIKNSWGADWGESGYFRIVRGKGKCGLNSVPSSSLI 350



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 12/111 (10%)

Query: 924  NSWGPIGPDEGFFKIERGNN-----ACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVG 978
            NSW  I  DEG        N     A   E +  Y +   + N   C+P DL H VL+VG
Sbjct: 242  NSWTSIPSDEGKMAAWLAANGPISIAINAEWLQTYTS--GISNPWFCNPQDLDHGVLIVG 299

Query: 979  YGKQDDI-----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +G   +       YW+++NSWG    + G+F+I RG   CG+  +   + I
Sbjct: 300  FGTGSNWLGEKEDYWIIKNSWGADWGESGYFRIVRGKGKCGLNSVPSSSLI 350


>gi|114679921|ref|YP_758371.1| cathepsin [Leucania separata nuclear polyhedrosis virus]
 gi|39598652|gb|AAR28838.1| cathepsin [Leucania separata nuclear polyhedrosis virus]
          Length = 359

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 164/322 (50%), Gaps = 22/322 (6%)

Query: 649 FDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDR 701
           ++ + + + F+ F+    R Y +  E ++R+E F Q+         K    Y  ++FSD 
Sbjct: 45  YEPDRMRDYFERFVRDYNRTYIDSVEREQRYETFVQNLKNINRLNQKSQASYDINKFSDL 104

Query: 702 SPEEILCK-TGF--KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 758
           + +E++ + TG     +   Y      + ++ K+++     G VPD WDWR         
Sbjct: 105 TKDEVVARFTGLDPSLAAAAYTDNNGTQYQLCKVVVVDGTPGRVPDLWDWRNSQKVTSVK 164

Query: 759 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI-EYTH 817
            Q  CGSCWAF+    +E QYAI+  +L++ S+ QLV+C +   GC G     +  E   
Sbjct: 165 QQGVCGSCWAFASVANIESQYAIRHDRLLDLSEQQLVDCDQIDQGCSGGLMHLAFQEILQ 224

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSK--VKLFTGKDFLHFNGSETMKKILYKYGPLSV 875
             GLESE  YPY+   G  + C  +  K  VKL     +        +++++Y  GP++V
Sbjct: 225 MGGLESELVYPYQ---GVDYACRLNPRKFDVKLSDCHRY-DLRDERKLRELVYTVGPIAV 280

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
            ++   I DY    +      C+   L HAVLLVG+G + + PYW+++NSWG    ++G+
Sbjct: 281 AIDCIDIIDYKSGIV----SMCNNNGLNHAVLLVGFGIEFDTPYWILKNSWGNDWGEKGY 336

Query: 936 FKIERGNNACG-IEQIAGYATI 956
           F+++R  N CG + ++A  AT+
Sbjct: 337 FRLKRNINGCGMMNELAASATV 358



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 161/323 (49%), Gaps = 23/323 (7%)

Query: 283 FDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDR 335
           ++ + + + F+ F+    R Y +  E ++R+E F Q+         K    Y  ++FSD 
Sbjct: 45  YEPDRMRDYFERFVRDYNRTYIDSVEREQRYETFVQNLKNINRLNQKSQASYDINKFSDL 104

Query: 336 SPEEILCK-TGF--KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 392
           + +E++ + TG     +   Y      + ++ K+++     G VPD WDWR         
Sbjct: 105 TKDEVVARFTGLDPSLAAAAYTDNNGTQYQLCKVVVVDGTPGRVPDLWDWRNSQKVTSVK 164

Query: 393 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI--EY 450
            Q  CGSCWAF+    +E QYAI+  +L++ S+ QLV+C +   GC G  GL      E 
Sbjct: 165 QQGVCGSCWAFASVANIESQYAIRHDRLLDLSEQQLVDCDQIDQGCSG--GLMHLAFQEI 222

Query: 451 THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGSETMKKILYKYGPLS 509
               GLESE  YPY+   G  + C  +  K  +       Y       +++++Y  GP++
Sbjct: 223 LQMGGLESELVYPYQ---GVDYACRLNPRKFDVKLSDCHRYDLRDERKLRELVYTVGPIA 279

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEG 569
           V ++   I  Y    +      C+   L HAVLLVG+G + D PYW+ +NSWG    ++G
Sbjct: 280 VAIDCIDIIDYKSGIV----SMCNNNGLNHAVLLVGFGIEFDTPYWILKNSWGNDWGEKG 335

Query: 570 FFKIERGNNACG-IEQIAGYATI 591
           +F+++R  N CG + ++A  AT+
Sbjct: 336 YFRLKRNINGCGMMNELAASATV 358



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G VPD WDWR          Q  CGSCWAF+    +E QYAI+  +L++ S+ QLV+C +
Sbjct: 146 GRVPDLWDWRNSQKVTSVKQQGVCGSCWAFASVANIESQYAIRHDRLLDLSEQQLVDCDQ 205

Query: 69  QCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSK--VKLFTGKDFLH 125
              GC G     +  E     GLESE  YPY+   G  + C  +  K  VKL     +  
Sbjct: 206 IDQGCSGGLMHLAFQEILQMGGLESELVYPYQ---GVDYACRLNPRKFDVKLSDCHRY-D 261

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
                 +++++Y  GP++V ++   I DY    +      C+   L HAVLLVG+G + +
Sbjct: 262 LRDERKLRELVYTVGPIAVAIDCIDIIDYKSGIV----SMCNNNGLNHAVLLVGFGIEFD 317

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
            PYW+++NSWG    ++G+F+++R  N CG + ++A  AT+
Sbjct: 318 TPYWILKNSWGNDWGEKGYFRLKRNINGCGMMNELAASATV 358



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYAT 1023
            C+   L HAVLLVG+G + D PYW+++NSWG    ++G+F+++R  N CG + ++A  AT
Sbjct: 298  CNNNGLNHAVLLVGFGIEFDTPYWILKNSWGNDWGEKGYFRLKRNINGCGMMNELAASAT 357

Query: 1024 I 1024
            +
Sbjct: 358  V 358


>gi|42516556|gb|AAS17989.1| cysteine proteinase CP2 [Paragonimus westermani]
          Length = 272

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/235 (40%), Positives = 131/235 (55%), Gaps = 17/235 (7%)

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           RYG ++FSD +PEE   K         Y     + ++V+++     K    P+  DWR K
Sbjct: 15  RYGVTQFSDLTPEEFAAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAK 63

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
                  +Q +CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC+G +   
Sbjct: 64  GAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAADGCNGGWPAS 123

Query: 812 S-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYK 869
           S +E  H  GLES+ DYPY    G K +C  +K ++ L    D +    SE      L +
Sbjct: 124 SYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERL-LAKIDDSIALGPSEDDNAAYLAE 179

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRN 924
           +GPLS LLN+  +  Y    I  + E CSP DL HAVL VGY K+ ++PYW+++N
Sbjct: 180 HGPLSTLLNAITLQYYQSGIIHPSYEECSPVDLNHAVLTVGYDKEGDMPYWIIKN 234



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 123/234 (52%), Gaps = 14/234 (5%)

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           RYG ++FSD +PEE   K         Y     + ++V+++     K    P+  DWR K
Sbjct: 15  RYGVTQFSDLTPEEFAAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAK 63

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
                  +Q +CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC G     
Sbjct: 64  GAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAADGCNGGWPAS 123

Query: 446 QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKY 505
             +E  H  GLES+ DYPY    G K +C  +K ++              +     L ++
Sbjct: 124 SYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERLLAKIDDSIALGPSEDDNAAYLAEH 180

Query: 506 GPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARN 559
           GPLS  LN+  + +Y    I  + E CSP DL HAVL VGY K+ D+PYW+ +N
Sbjct: 181 GPLSTLLNAITLQYYQSGIIHPSYEECSPVDLNHAVLTVGYDKEGDMPYWIIKN 234



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/185 (43%), Positives = 108/185 (58%), Gaps = 6/185 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P+  DWR K       +Q  CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C +  
Sbjct: 54  APERIDWRAKGAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAA 113

Query: 71  SGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G +   S +E  H  GLES+ DYPY    G K +C  +K ++ L    D +    S
Sbjct: 114 DGCNGGWPASSYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERL-LAKIDDSIALGPS 169

Query: 130 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
           E      L ++GPLS LLN+  +  Y    I  + E CSP DL HAVL VGY K+ ++PY
Sbjct: 170 EDDNAAYLAEHGPLSTLLNAITLQYYQSGIIHPSYEECSPVDLNHAVLTVGYDKEGDMPY 229

Query: 189 WLVRN 193
           W+++N
Sbjct: 230 WIIKN 234



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 927 GPIGPDEGFFKIERGNNACGIEQIAG--YATIDVVKNDETCSPYDLGHAVLLVGYGKQDD 984
           GP   D   +  E G  +  +  I    Y +  +  + E CSP DL HAVL VGY K+ D
Sbjct: 167 GPSEDDNAAYLAEHGPLSTLLNAITLQYYQSGIIHPSYEECSPVDLNHAVLTVGYDKEGD 226

Query: 985 IPYWLVRN 992
           +PYW+++N
Sbjct: 227 MPYWIIKN 234


>gi|94556727|gb|ABF46642.1| papain-like cysteine proteinase [Pachysandra terminalis]
          Length = 374

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 173/378 (45%), Gaps = 44/378 (11%)

Query: 599 VLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETF 658
           +L +  ++L  +  +    AS +      D +  QVVA  D    +  L     +    F
Sbjct: 3   LLSRFVLLLFSSSLVFAATASTVSSDESDDLLIRQVVAGADDHDNDDLLLNAEHH----F 58

Query: 659 KAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCKT 710
            +F  + G+ Y + +E   RF  FK +  +            +G ++F D +P E     
Sbjct: 59  SSFKKRFGKAYTSCDEHDRRFGVFKANLRRAKRNQILDPSAVHGVTQFFDLTPAEF---- 114

Query: 711 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 770
                 RTY  +   R   +     +     +P  +DWR      P  +Q +CGSCW+FS
Sbjct: 115 -----RRTYLGLKRLRLPADTHEAPILPTNDLPADFDWRDHGAVTPVKNQGSCGSCWSFS 169

Query: 771 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-G 820
             G LEG   + TGKLV  S+ QLV+C   C         SGC+G     + EYT +A G
Sbjct: 170 ATGALEGANFLATGKLVSLSEQQLVDCDHVCDSEDPSSCDSGCNGGLMTSAFEYTLKAGG 229

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNS 879
           LE E+DYPY   +    KC +DK+K+ + +  +F   +  E  +   L   GPL++ +N+
Sbjct: 230 LEREEDYPYTGTDHS--KCKFDKTKIAV-SASNFSVVSLDENQIAANLVTNGPLAIGINA 286

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPD 932
             +  Y G         CS   L H VLLVGYG            PYW+++NSWG    +
Sbjct: 287 MFMQTYIGGV--SCPYICSKRLLDHGVLLVGYGSAGFAPIRFKEKPYWIIKNSWGESWGE 344

Query: 933 EGFFKIERGNNACGIEQI 950
           +G++KI RG N CG++ +
Sbjct: 345 KGYYKICRGRNICGMDSM 362



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 175/378 (46%), Gaps = 43/378 (11%)

Query: 233 VLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETF 292
           +L +  ++L  +  +    AS +      D +  QVVA  D    +  L     +    F
Sbjct: 3   LLSRFVLLLFSSSLVFAATASTVSSDESDDLLIRQVVAGADDHDNDDLLLNAEHH----F 58

Query: 293 KAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCKT 344
            +F  + G+ Y + +E   RF  FK +  +            +G ++F D +P E     
Sbjct: 59  SSFKKRFGKAYTSCDEHDRRFGVFKANLRRAKRNQILDPSAVHGVTQFFDLTPAEF---- 114

Query: 345 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 404
                 RTY  +   R   +     +     +P  +DWR      P  +Q +CGSCW+FS
Sbjct: 115 -----RRTYLGLKRLRLPADTHEAPILPTNDLPADFDWRDHGAVTPVKNQGSCGSCWSFS 169

Query: 405 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEYTHQA-G 455
             G LEG   + TGKLV  S+ QLV+C   C     S C  GC+G  +    EYT +A G
Sbjct: 170 ATGALEGANFLATGKLVSLSEQQLVDCDHVCDSEDPSSCDSGCNGGLMTSAFEYTLKAGG 229

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNS 514
           LE E+DYPY   +    KC +DK+K+ + +  +F   +  E  +   L   GPL++G+N+
Sbjct: 230 LEREEDYPYTGTDHS--KCKFDKTKIAV-SASNFSVVSLDENQIAANLVTNGPLAIGINA 286

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLARNSWGPIGPD 567
             +  Y G         CS   L H VLLVGYG          + PYW+ +NSWG    +
Sbjct: 287 MFMQTYIGGV--SCPYICSKRLLDHGVLLVGYGSAGFAPIRFKEKPYWIIKNSWGESWGE 344

Query: 568 EGFFKIERGNNACGIEQI 585
           +G++KI RG N CG++ +
Sbjct: 345 KGYYKICRGRNICGMDSM 362



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 119/227 (52%), Gaps = 23/227 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR      P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C   C
Sbjct: 141 LPADFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHVC 200

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GLE E+DYPY   +    KC +DK+K+ + + 
Sbjct: 201 DSEDPSSCDSGCNGGLMTSAFEYTLKAGGLEREEDYPYTGTDHS--KCKFDKTKIAV-SA 257

Query: 121 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
            +F   +  E  +   L   GPL++ +N+  +  Y G         CS   L H VLLVG
Sbjct: 258 SNFSVVSLDENQIAANLVTNGPLAIGINAMFMQTYIGGV--SCPYICSKRLLDHGVLLVG 315

Query: 180 YGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           YG            PYW+++NSWG    ++G++KI RG N CG++ +
Sbjct: 316 YGSAGFAPIRFKEKPYWIIKNSWGESWGEKGYYKICRGRNICGMDSM 362



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLV 990
            +  G  A GI  +     I  V     CS   L H VLLVGYG          + PYW++
Sbjct: 275  VTNGPLAIGINAMFMQTYIGGVSCPYICSKRLLDHGVLLVGYGSAGFAPIRFKEKPYWII 334

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    ++G++KI RG N CG++ +
Sbjct: 335  KNSWGESWGEKGYYKICRGRNICGMDSM 362


>gi|7211745|gb|AAF40416.1|AF216785_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
 gi|7381223|gb|AAF61442.1|AF138266_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
          Length = 366

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 163/340 (47%), Gaps = 47/340 (13%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 704
           N    F  F  + G+ YA+DEE   R   FK +    K+H++      +G ++FSD +P 
Sbjct: 44  NADHHFAVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQQLDPAAVHGVTQFSDLTPT 103

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E   K  F    R   +  AD  K   +L   E    +P  +DWR +    P  +Q  CG
Sbjct: 104 EFRRK--FLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDRGAVTPVKNQGTCG 155

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCW+FS  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G     + EY
Sbjct: 156 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEY 215

Query: 816 THQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
           T +A GL  E+DYPY   + +   C +DK+K+        +     + +   L K GPL+
Sbjct: 216 TLKAGGLMREEDYPYTGNDLQ--VCRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLA 273

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVR 923
           V +N+  +  Y G           PY     L H VLLVGYG       +    PYW+++
Sbjct: 274 VAINAVFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIK 326

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVVKND 962
           NSWG    + G++KI RG N CG++  ++  A +    +D
Sbjct: 327 NSWGESWGENGYYKICRGRNVCGVDSMVSTVAAVSTTTSD 366



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 159/327 (48%), Gaps = 45/327 (13%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 338
           N    F  F  + G+ YA+DEE   R   FK +    K+H++      +G ++FSD +P 
Sbjct: 44  NADHHFAVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQQLDPAAVHGVTQFSDLTPT 103

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E   K  F    R   +  AD  K   +L   E    +P  +DWR +    P  +Q  CG
Sbjct: 104 EFRRK--FLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDRGAVTPVKNQGTCG 155

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEY 450
           SCW+FS  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G  +    EY
Sbjct: 156 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEY 215

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
           T +A GL  E+DYPY  GN  +  C +DK+K+        +     + +   L K GPL+
Sbjct: 216 TLKAGGLMREEDYPY-TGNDLQV-CRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLA 273

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLAR 558
           V +N+  +  Y G           PY     L H VLLVGYG       +  + PYW+ +
Sbjct: 274 VAINAVFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIK 326

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQI 585
           NSWG    + G++KI RG N CG++ +
Sbjct: 327 NSWGESWGENGYYKICRGRNVCGVDSM 353



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 117/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR +    P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 133 LPSDFDWRDRGAVTPVKNQGTCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 192

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY   + +   C +DK+K+     
Sbjct: 193 DPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQ--VCRFDKTKIAAKVA 250

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVL 303

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 353



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 298  LDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 353


>gi|1353726|gb|AAB01769.1| cysteine proteinase homolog, partial [Naegleria fowleri]
          Length = 347

 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 161/332 (48%), Gaps = 46/332 (13%)

Query: 658 FKAFIVKRGRQYAN---DEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEI 706
            K   +K  R+YA     EE   R++ FK +  K        K E +G ++FSD +PEE 
Sbjct: 29  MKKLFIKFSRKYAKVYGTEEHNNRYQIFKANVEKSRYYNHVGKRENFGITKFSDLTPEEF 88

Query: 707 ----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
               L KT   ++    ++I+A  +       EV+     P ++DWR+        +Q A
Sbjct: 89  KRMFLMKT---YTPEEAKKILAAPQHAVLSEKEVQ---TAPTSFDWRQHGAVTRVKNQGA 142

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC----------SGCDGCFFEPS 812
           CGSCW FS  G +EGQ+AIK GKLV  S+ QLV+C   C          SGC+G     +
Sbjct: 143 CGSCWTFSTTGNVEGQWAIKKGKLVSLSEQQLVDCDHNCVTYQNQQACDSGCNGGLMWSA 202

Query: 813 IEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG 871
            +Y     GL++E  YPY+   G    C ++KS V           +    M   L   G
Sbjct: 203 FQYVIKNGGLDTEDSYPYE---GVDDTCRFNKSNVAATISSWTSISSDENQMAAWLAANG 259

Query: 872 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY-------GKQDNIPYWLVRN 924
           P+S+ +N++ +  Y  T    +   C+P DL H VL+VGY       G ++N  YW+V+N
Sbjct: 260 PISIAINAEWLQYY--TSGISDPWFCNPQDLDHGVLIVGYGVGKSWLGSEEN--YWIVKN 315

Query: 925 SWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           SWG    ++G+F+I RG   CG+  +   + +
Sbjct: 316 SWGSDWGEDGYFRIIRGKGKCGLNSVPSSSIV 347



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 157/330 (47%), Gaps = 41/330 (12%)

Query: 292 FKAFIVKRGRQYAN---DEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEI 340
            K   +K  R+YA     EE   R++ FK +  K        K E +G ++FSD +PEE 
Sbjct: 29  MKKLFIKFSRKYAKVYGTEEHNNRYQIFKANVEKSRYYNHVGKRENFGITKFSDLTPEEF 88

Query: 341 ----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
               L KT   ++    ++I+A  +       EV+     P ++DWR+        +Q A
Sbjct: 89  KRMFLMKT---YTPEEAKKILAAPQHAVLSEKEVQ---TAPTSFDWRQHGAVTRVKNQGA 142

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGC-GGCDG--LEQP 447
           CGSCW FS  G +EGQ+AIK GKLV  S+ QLV+C   C        C  GC+G  +   
Sbjct: 143 CGSCWTFSTTGNVEGQWAIKKGKLVSLSEQQLVDCDHNCVTYQNQQACDSGCNGGLMWSA 202

Query: 448 IEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYG 506
            +Y     GL++E  YPY    G    C ++KS V           +    M   L   G
Sbjct: 203 FQYVIKNGGLDTEDSYPYE---GVDDTCRFNKSNVAATISSWTSISSDENQMAAWLAANG 259

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK-----QDDIPYWLARNSW 561
           P+S+ +N+  + +Y  T    +   C+P DL H VL+VGYG        +  YW+ +NSW
Sbjct: 260 PISIAINAEWLQYY--TSGISDPWFCNPQDLDHGVLIVGYGVGKSWLGSEENYWIVKNSW 317

Query: 562 GPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           G    ++G+F+I RG   CG+  +   + +
Sbjct: 318 GSDWGEDGYFRIIRGKGKCGLNSVPSSSIV 347



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 117/233 (50%), Gaps = 25/233 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P ++DWR+        +Q  CGSCW FS  G +EGQ+AIK GKLV  S+ QLV+C   C
Sbjct: 122 APTSFDWRQHGAVTRVKNQGACGSCWTFSTTGNVEGQWAIKKGKLVSLSEQQLVDCDHNC 181

Query: 71  ----------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
                     SGC+G     + +Y     GL++E  YPY+   G    C ++KS V    
Sbjct: 182 VTYQNQQACDSGCNGGLMWSAFQYVIKNGGLDTEDSYPYE---GVDDTCRFNKSNVAATI 238

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
                  +    M   L   GP+S+ +N++ +  Y  T    +   C+P DL H VL+VG
Sbjct: 239 SSWTSISSDENQMAAWLAANGPISIAINAEWLQYY--TSGISDPWFCNPQDLDHGVLIVG 296

Query: 180 Y-------GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           Y       G ++N  YW+V+NSWG    ++G+F+I RG   CG+  +   + +
Sbjct: 297 YGVGKSWLGSEEN--YWIVKNSWGSDWGEDGYFRIIRGKGKCGLNSVPSSSIV 347



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 5/65 (7%)

Query: 965  CSPYDLGHAVLLVGYGKQ-----DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 1019
            C+P DL H VL+VGYG        +  YW+V+NSWG    ++G+F+I RG   CG+  + 
Sbjct: 283  CNPQDLDHGVLIVGYGVGKSWLGSEENYWIVKNSWGSDWGEDGYFRIIRGKGKCGLNSVP 342

Query: 1020 GYATI 1024
              + +
Sbjct: 343  SSSIV 347


>gi|167833701|gb|ACA02577.1| cathepsin [Spodoptera frugiperda MNPV]
          Length = 340

 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 160/315 (50%), Gaps = 34/315 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 709
           F+ FI +  +QY +++E K R+  F+ +    ++K+ R     Y  + F+D +  EI+ +
Sbjct: 43  FEKFIAQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMTKNEIVIR 102

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 764
            TG           +A  E        V  DGP     P  +DWR  N      DQ  CG
Sbjct: 103 HTG-----------LASGELGANFCETVVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCG 151

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLES 823
           +CWAF+  G LE QYAIK  +L++ ++ QLV+C     GCDG     + E      G+E 
Sbjct: 152 ACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDFVDMGCDGGLIHTAYEQIMRMGGVEQ 211

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLI 882
           E DYPYK    E+  CA    K        + +     E ++ +L   GP+++ +++  +
Sbjct: 212 EFDYPYK---AERQPCALKPHKFAAGVRNCYRYVLMNEERLEDLLRYVGPIAIAVDAVDL 268

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
            DY G  +      C    L HAVLLVGYG ++N+PYW+++NSWG    ++G+ ++ RG 
Sbjct: 269 TDYYGGIV----SFCKNNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGV 324

Query: 943 NACG-IEQIAGYATI 956
           N+CG I ++A  A +
Sbjct: 325 NSCGMINELASSAQV 339



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 156/316 (49%), Gaps = 35/316 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 343
           F+ FI +  +QY +++E K R+  F+ +    ++K+ R     Y  + F+D +  EI+ +
Sbjct: 43  FEKFIAQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMTKNEIVIR 102

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 398
            TG           +A  E        V  DGP     P  +DWR  N      DQ  CG
Sbjct: 103 HTG-----------LASGELGANFCETVVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCG 151

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           +CWAF+  G LE QYAIK  +L++ ++ QLV+C     GC G        +     G+E 
Sbjct: 152 ACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDFVDMGCDGGLIHTAYEQIMRMGGVEQ 211

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGSETMKKILYKYGPLSVGLNS-HL 516
           E DYPY+    E+  CA    K        + Y     E ++ +L   GP+++ +++  L
Sbjct: 212 EFDYPYK---AERQPCALKPHKFAAGVRNCYRYVLMNEERLEDLLRYVGPIAIAVDAVDL 268

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
             +Y G         C    L HAVLLVGYG ++++PYW+ +NSWG    ++G+ ++ RG
Sbjct: 269 TDYYGGIV-----SFCKNNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRG 323

Query: 577 NNACG-IEQIAGYATI 591
            N+CG I ++A  A +
Sbjct: 324 VNSCGMINELASSAQV 339



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 122/228 (53%), Gaps = 14/228 (6%)

Query: 5   VEKDGPV----PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
           V  DGP     P  +DWR  N      DQ  CG+CWAF+  G LE QYAIK  +L++ ++
Sbjct: 119 VVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAE 178

Query: 61  SQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
            QLV+C     GCDG     + E      G+E E DYPYK    E+  CA    K     
Sbjct: 179 QQLVDCDFVDMGCDGGLIHTAYEQIMRMGGVEQEFDYPYK---AERQPCALKPHKFAAGV 235

Query: 120 GKDFLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 178
              + +     E ++ +L   GP+++ +++  + DY G  +      C    L HAVLLV
Sbjct: 236 RNCYRYVLMNEERLEDLLRYVGPIAIAVDAVDLTDYYGGIV----SFCKNNGLNHAVLLV 291

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
           GYG ++N+PYW+++NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 292 GYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 339



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYAT 1023
            C    L HAVLLVGYG ++++PYW+++NSWG    ++G+ ++ RG N+CG I ++A  A 
Sbjct: 279  CKNNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQ 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|125860143|ref|YP_001036312.1| viral cathepsin [Spodoptera frugiperda MNPV]
 gi|120969288|gb|ABM45731.1| viral cathepsin [Spodoptera frugiperda MNPV]
 gi|319997353|gb|ADV91251.1| V-CATH [Spodoptera frugiperda MNPV]
 gi|384087478|gb|AFH58958.1| v-cath [Spodoptera frugiperda MNPV]
          Length = 339

 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 160/315 (50%), Gaps = 34/315 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 709
           F+ FI +  +QY +++E K R+  F+ +    ++K+ R     Y  + F+D +  EI+ +
Sbjct: 42  FEKFIAQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMTKNEIVIR 101

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 764
            TG           +A  E        V  DGP     P  +DWR  N      DQ  CG
Sbjct: 102 HTG-----------LASGELGANFCETVVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCG 150

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLES 823
           +CWAF+  G LE QYAIK  +L++ ++ QLV+C     GCDG     + E      G+E 
Sbjct: 151 ACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDFVDMGCDGGLIHTAYEQIMRMGGVEQ 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLI 882
           E DYPYK    E+  CA    K        + +     E ++ +L   GP+++ +++  +
Sbjct: 211 EFDYPYK---AERQPCALKPHKFAAGVRNCYRYVLMNEERLEDLLRYVGPIAIAVDAVDL 267

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
            DY G  +      C    L HAVLLVGYG ++N+PYW+++NSWG    ++G+ ++ RG 
Sbjct: 268 TDYYGGIV----SFCKNNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGV 323

Query: 943 NACG-IEQIAGYATI 956
           N+CG I ++A  A +
Sbjct: 324 NSCGMINELASSAQV 338



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 156/316 (49%), Gaps = 35/316 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 343
           F+ FI +  +QY +++E K R+  F+ +    ++K+ R     Y  + F+D +  EI+ +
Sbjct: 42  FEKFIAQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMTKNEIVIR 101

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 398
            TG           +A  E        V  DGP     P  +DWR  N      DQ  CG
Sbjct: 102 HTG-----------LASGELGANFCETVVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCG 150

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           +CWAF+  G LE QYAIK  +L++ ++ QLV+C     GC G        +     G+E 
Sbjct: 151 ACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDFVDMGCDGGLIHTAYEQIMRMGGVEQ 210

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGSETMKKILYKYGPLSVGLNS-HL 516
           E DYPY+    E+  CA    K        + Y     E ++ +L   GP+++ +++  L
Sbjct: 211 EFDYPYK---AERQPCALKPHKFAAGVRNCYRYVLMNEERLEDLLRYVGPIAIAVDAVDL 267

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
             +Y G         C    L HAVLLVGYG ++++PYW+ +NSWG    ++G+ ++ RG
Sbjct: 268 TDYYGGIV-----SFCKNNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRG 322

Query: 577 NNACG-IEQIAGYATI 591
            N+CG I ++A  A +
Sbjct: 323 VNSCGMINELASSAQV 338



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 122/228 (53%), Gaps = 14/228 (6%)

Query: 5   VEKDGPV----PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
           V  DGP     P  +DWR  N      DQ  CG+CWAF+  G LE QYAIK  +L++ ++
Sbjct: 118 VVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAE 177

Query: 61  SQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
            QLV+C     GCDG     + E      G+E E DYPYK    E+  CA    K     
Sbjct: 178 QQLVDCDFVDMGCDGGLIHTAYEQIMRMGGVEQEFDYPYK---AERQPCALKPHKFAAGV 234

Query: 120 GKDFLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 178
              + +     E ++ +L   GP+++ +++  + DY G  +      C    L HAVLLV
Sbjct: 235 RNCYRYVLMNEERLEDLLRYVGPIAIAVDAVDLTDYYGGIV----SFCKNNGLNHAVLLV 290

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
           GYG ++N+PYW+++NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 291 GYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 338



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYAT 1023
            C    L HAVLLVGYG ++++PYW+++NSWG    ++G+ ++ RG N+CG I ++A  A 
Sbjct: 278  CKNNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQ 337

Query: 1024 I 1024
            +
Sbjct: 338  V 338


>gi|72389853|ref|XP_845221.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359929|gb|AAX80354.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801756|gb|AAZ11662.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 166/363 (45%), Gaps = 41/363 (11%)

Query: 605 IMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVK 664
           +  ++   +L  +A+CL   +L                  GSL  + E++   F AF  K
Sbjct: 7   VRFVRLPVVLLAIAACLASVAL------------------GSLHVE-ESLEMRFAAFKKK 47

Query: 665 RGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSE 716
            G+ Y + +E   RF  F+        Q     +  +G + FSD + EE      F+   
Sbjct: 48  YGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREE------FRARY 101

Query: 717 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 776
           R      A  +K  +  + V   G  P A DWR+K    P  DQ  CGSCWAFS  G +E
Sbjct: 102 RNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIE 160

Query: 777 GQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNAN 833
           GQ+ +    LV  S+  LV C    SGC+G   + +  +   ++   + +E  YPY + N
Sbjct: 161 GQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGN 220

Query: 834 GEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 893
           GE+ +C  +  ++              + +   L + GPL++ +++    DYNG  +   
Sbjct: 221 GEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL--- 277

Query: 894 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
             +C+   L H VLLVGY    N PYW+++NSW  +  ++G+ +IE+G N C + Q    
Sbjct: 278 -TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSS 336

Query: 954 ATI 956
           A +
Sbjct: 337 AVV 339



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 163/363 (44%), Gaps = 40/363 (11%)

Query: 239 IMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVK 298
           +  ++   +L  +A+CL   +L                  GSL  + E++   F AF  K
Sbjct: 7   VRFVRLPVVLLAIAACLASVAL------------------GSLHVE-ESLEMRFAAFKKK 47

Query: 299 RGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSE 350
            G+ Y + +E   RF  F+        Q     +  +G + FSD + EE      F+   
Sbjct: 48  YGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREE------FRARY 101

Query: 351 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 410
           R      A  +K  +  + V   G  P A DWR+K    P  DQ  CGSCWAFS  G +E
Sbjct: 102 RNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIE 160

Query: 411 GQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKDYPYRNGN 468
           GQ+ +    LV  S+  LV C    SGC G   D     I  ++   + +E  YPY +GN
Sbjct: 161 GQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGN 220

Query: 469 GEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKN 528
           GE+ +C  +  ++              + +   L + GPL++ +++     YNG  +   
Sbjct: 221 GEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL--- 277

Query: 529 DETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
             +C+   L H VLLVGY    + PYW+ +NSW  +  ++G+ +IE+G N C + Q    
Sbjct: 278 -TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSS 336

Query: 589 ATI 591
           A +
Sbjct: 337 AVV 339



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 113/220 (51%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C  
Sbjct: 124 GRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
             SGC+G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++          
Sbjct: 184 IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDL 243

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N
Sbjct: 244 PQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSN 299

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 300 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 279  SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|340053971|emb|CCC48265.1| cysteine peptidase precursor, fragment, partial [Trypanosoma vivax
           Y486]
          Length = 389

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 152/312 (48%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 709
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGTCGSCWSF 146

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKD 826
           S  G +EGQ+A     L   S+  LV C  + +GC G F + + E+    +   + + K 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKENSGKVYTGKS 206

Query: 827 YPYKNANGEKFKC-AYDKSKVKLFTGK-DFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + +G K  C  Y        TG  D  H    + + K L   GP++V +++     
Sbjct: 207 YPYVSEDGSKPFCIPYGHEVGATITGHVDIPH--DEDAIAKYLADNGPVAVAVDATTFMS 264

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y+G  +     +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N 
Sbjct: 265 YSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQ 320

Query: 945 CGIEQIAGYATI 956
           C + Q+A  A +
Sbjct: 321 CLVAQLASSAVV 332



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 148/310 (47%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 343
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGTCGSCWSF 146

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKD 461
           S  G +EGQ+A     L   S+  LV C  + +GCGG   D   + I   +   + + K 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKENSGKVYTGKS 206

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           YPY + +G K  C     +V           +  + + K L   GP++V +++     Y+
Sbjct: 207 YPYVSEDGSKPFCIPYGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATTFMSYS 266

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
           G  +     +C+   L H VLLVGY      PYW+ +NSW     ++G+ +IE+G N C 
Sbjct: 267 GGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCL 322

Query: 582 IEQIAGYATI 591
           + Q+A  A +
Sbjct: 323 VAQLASSAVV 332



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 112/222 (50%), Gaps = 11/222 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCW+FS  G +EGQ+A     L   S+  LV C  
Sbjct: 117 GKAPAAVDWRRKGAVTPVKDQGTCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDF 176

Query: 69  QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKC-AYDKSKVKLFTGK-DF 123
           + +GC G F + + E+    +   + + K YPY + +G K  C  Y        TG  D 
Sbjct: 177 KDNGCGGGFMDNAFEWIVKENSGKVYTGKSYPYVSEDGSKPFCIPYGHEVGATITGHVDI 236

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            H    + + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY   
Sbjct: 237 PH--DEDAIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDS 290

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
              PYW+++NSW     ++G+ +IE+G N C + Q+A  A +
Sbjct: 291 SKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAVV 332


>gi|72389861|ref|XP_845225.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389863|ref|XP_845226.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359933|gb|AAX80358.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359934|gb|AAX80359.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801760|gb|AAZ11666.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801761|gb|AAZ11667.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 154/323 (47%), Gaps = 23/323 (7%)

Query: 645 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 696
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY- 815
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C    SGC+G   + +  + 
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWI 200

Query: 816 --THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
             ++   + +E  YPY + NGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           ++ +++    DYNG  +     +C+   L H VLLVGY    N PYW+++NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 22/323 (6%)

Query: 279 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 330
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPI 448
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C    SGC G   D     I
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWI 200

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
             ++   + +E  YPY +GNGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           ++ +++     YNG  +     +C+   L H VLLVGY    + PYW+ +NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 113/220 (51%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C  
Sbjct: 124 GRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
             SGC+G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++          
Sbjct: 184 IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDL 243

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N
Sbjct: 244 PQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSN 299

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 300 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 279  SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|410045434|ref|XP_003313198.2| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Pan troglodytes]
          Length = 548

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 147/314 (46%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 247 MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 306

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 307 EF---------RTIYLNPLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 357

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+
Sbjct: 358 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLET 417

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY Y+   G    C +   K K++     +     + +   L K GP+SV +N+  + 
Sbjct: 418 EDDYSYQ---GHMQSCNFSAEKAKVYINDSVVLSQNEQKLAAWLAKRGPISVAINAFGMQ 474

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY     R     CSP+ + HAVLLVGYG + D+P+W  +NSWG    ++G++ +  G+ 
Sbjct: 475 FYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHCGSE 534

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  + ++
Sbjct: 535 ACGVNTMASLSVVE 548



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 151/316 (47%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 247 MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 306

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 307 EF---------RTIYLNPLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 357

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  GL
Sbjct: 358 SCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGL 415

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y+   G    C +   K K++     +     + +   L K GP+SV +N+  
Sbjct: 416 ETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVVLSQNEQKLAAWLAKRGPISVAINAFG 472

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y     R     CSP+ + HAVLLVGYG + ++P+W ++NSWG    ++G++ +  G
Sbjct: 473 MQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHCG 532

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  + ++
Sbjct: 533 SEACGVNTMASLSVVE 548



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 335 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 394

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++     +   
Sbjct: 395 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVVLSQ 449

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 450 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 509

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ +  G+ ACG+  +A  + ++
Sbjct: 510 FWAIKNSWGTDWGEKGYYYLHCGSEACGVNTMASLSVVE 548



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + D+P+W ++NSWG    ++G++ +  G+ ACG+  +A  + +
Sbjct: 488  CSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHCGSEACGVNTMASLSVV 547

Query: 1025 D 1025
            +
Sbjct: 548  E 548


>gi|356509908|ref|XP_003523684.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 366

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 157/339 (46%), Gaps = 49/339 (14%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPE 704
           N    F AF  K  + YA  EE   RF  FK +    K H++      +G + FSD +P 
Sbjct: 46  NAEHHFSAFKTKFAKTYATQEEHDHRFRIFKNNLLRAKSHQKLDPSAVHGVTRFSDLTPS 105

Query: 705 EILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E   +  G K       R+ +D +K       +     +P  +DWR         +Q +C
Sbjct: 106 EFRGQFLGLK-----PLRLPSDAQKAP-----ILPTSDLPTDFDWRDHGAVTGVKNQGSC 155

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIE 814
           GSCW+FS  G LEG + + TG LV  S+ QLV+C  +C         SGC+G     + E
Sbjct: 156 GSCWSFSAVGALEGAHFLSTGGLVSLSEQQLVDCDHECDPEERGACDSGCNGGLMTTAFE 215

Query: 815 YTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
           YT +A GL  E+DYPY     ++  C +DKSK+        +     E +   L K GPL
Sbjct: 216 YTLKAGGLMREEDYPYTGR--DRGPCKFDKSKIAASVANFSVVSLDEEQIAANLVKNGPL 273

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLV 922
           +V +N+  +  Y G           PY     L H VLLVGYG       +    PYW++
Sbjct: 274 AVGINAVFMQTYIGG-------VSCPYICGKHLDHGVLLVGYGSGAYAPIRFKEKPYWII 326

Query: 923 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKN 961
           +NSWG    +EG++KI RG N CG++ +        V N
Sbjct: 327 KNSWGESWGEEGYYKICRGRNVCGVDSMVSTVAAIHVSN 365



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 160/337 (47%), Gaps = 49/337 (14%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPE 338
           N    F AF  K  + YA  EE   RF  FK +    K H++      +G + FSD +P 
Sbjct: 46  NAEHHFSAFKTKFAKTYATQEEHDHRFRIFKNNLLRAKSHQKLDPSAVHGVTRFSDLTPS 105

Query: 339 EILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E   +  G K       R+ +D +K       +     +P  +DWR         +Q +C
Sbjct: 106 EFRGQFLGLK-----PLRLPSDAQKAP-----ILPTSDLPTDFDWRDHGAVTGVKNQGSC 155

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIE 449
           GSCW+FS  G LEG + + TG LV  S+ QLV+C  +C       C  GC+G  +    E
Sbjct: 156 GSCWSFSAVGALEGAHFLSTGGLVSLSEQQLVDCDHECDPEERGACDSGCNGGLMTTAFE 215

Query: 450 YTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
           YT +A GL  E+DYPY     ++  C +DKSK+        +     E +   L K GPL
Sbjct: 216 YTLKAGGLMREEDYPYT--GRDRGPCKFDKSKIAASVANFSVVSLDEEQIAANLVKNGPL 273

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLA 557
           +VG+N+  +  Y G           PY     L H VLLVGYG       +  + PYW+ 
Sbjct: 274 AVGINAVFMQTYIGG-------VSCPYICGKHLDHGVLLVGYGSGAYAPIRFKEKPYWII 326

Query: 558 RNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDV 593
           +NSWG    +EG++KI RG N CG++  ++  A I V
Sbjct: 327 KNSWGESWGEEGYYKICRGRNVCGVDSMVSTVAAIHV 363



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 120/239 (50%), Gaps = 31/239 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         +Q  CGSCW+FS  G LEG + + TG LV  S+ QLV+C  +C
Sbjct: 134 LPTDFDWRDHGAVTGVKNQGSCGSCWSFSAVGALEGAHFLSTGGLVSLSEQQLVDCDHEC 193

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY     ++  C +DKSK+     
Sbjct: 194 DPEERGACDSGCNGGLMTTAFEYTLKAGGLMREEDYPYTGR--DRGPCKFDKSKIAASVA 251

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 252 NFSVVSLDEEQIAANLVKNGPLAVGINAVFMQTYIGG-------VSCPYICGKHLDHGVL 304

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDV 227
           LVGYG       +    PYW+++NSWG    +EG++KI RG N CG++  ++  A I V
Sbjct: 305 LVGYGSGAYAPIRFKEKPYWIIKNSWGESWGEEGYYKICRGRNVCGVDSMVSTVAAIHV 363



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  A GI  +     I  V     C  + L H VLLVGYG       +  + PYW++
Sbjct: 268  VKNGPLAVGINAVFMQTYIGGVSCPYICGKH-LDHGVLLVGYGSGAYAPIRFKEKPYWII 326

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDV 1026
            +NSWG    +EG++KI RG N CG++  ++  A I V
Sbjct: 327  KNSWGESWGEEGYYKICRGRNVCGVDSMVSTVAAIHV 363


>gi|72389847|ref|XP_845218.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389849|ref|XP_845219.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389851|ref|XP_845220.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389857|ref|XP_845223.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359926|gb|AAX80351.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359927|gb|AAX80352.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359928|gb|AAX80353.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359931|gb|AAX80356.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801753|gb|AAZ11659.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801754|gb|AAZ11660.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801755|gb|AAZ11661.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801758|gb|AAZ11664.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 450

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 154/323 (47%), Gaps = 23/323 (7%)

Query: 645 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 696
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY- 815
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C    SGC+G   + +  + 
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWI 200

Query: 816 --THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
             ++   + +E  YPY + NGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           ++ +++    DYNG  +     +C+   L H VLLVGY    N PYW+++NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 22/323 (6%)

Query: 279 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 330
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPI 448
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C    SGC G   D     I
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWI 200

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
             ++   + +E  YPY +GNGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           ++ +++     YNG  +     +C+   L H VLLVGY    + PYW+ +NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 113/220 (51%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C  
Sbjct: 124 GRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
             SGC+G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++          
Sbjct: 184 IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDL 243

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N
Sbjct: 244 PQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSN 299

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 300 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 279  SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|72389855|ref|XP_845222.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389865|ref|XP_845227.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389867|ref|XP_845228.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359930|gb|AAX80355.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359935|gb|AAX80360.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359936|gb|AAX80361.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801757|gb|AAZ11663.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801762|gb|AAZ11668.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801763|gb|AAZ11669.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 154/323 (47%), Gaps = 23/323 (7%)

Query: 645 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 696
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY- 815
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C    SGC+G   + +  + 
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWI 200

Query: 816 --THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
             ++   + +E  YPY + NGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           ++ +++    DYNG  +     +C+   L H VLLVGY    N PYW+++NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 22/323 (6%)

Query: 279 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 330
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPI 448
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C    SGC G   D     I
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWI 200

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
             ++   + +E  YPY +GNGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           ++ +++     YNG  +     +C+   L H VLLVGY    + PYW+ +NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 113/220 (51%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C  
Sbjct: 124 GRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
             SGC+G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++          
Sbjct: 184 IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDL 243

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N
Sbjct: 244 PQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSN 299

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 300 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 279  SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|18399697|ref|NP_565512.1| putative cysteine proteinase A494 [Arabidopsis thaliana]
 gi|12643282|sp|P43295.2|A494_ARATH RecName: Full=Probable cysteine proteinase A494; Flags: Precursor
 gi|4567274|gb|AAD23687.1| cysteine proteinase [Arabidopsis thaliana]
 gi|116325924|gb|ABJ98563.1| At2g21430 [Arabidopsis thaliana]
 gi|330252083|gb|AEC07177.1| putative cysteine proteinase A494 [Arabidopsis thaliana]
          Length = 361

 Score =  159 bits (402), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 175/383 (45%), Gaps = 69/383 (18%)

Query: 603 KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 662
           + +  +  +F+   V+ C     L  ++ D+   +V  L+ E           + F  F 
Sbjct: 6   RVLFSVSLIFVFVSVSVCGDEDVLIRQVVDETEPKV--LSSE-----------DHFTLFK 52

Query: 663 VKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEE-----ILCK 709
            K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E     +  K
Sbjct: 53  KKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVK 112

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
            GFK  +   +  +   + +             P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 113 GGFKLPKDANQAPILPTQNL-------------PEEFDWRDRGAVTPVKNQGSCGSCWSF 159

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG + + TGKLV  S+ QLV+C  +C         SGC+G     + EYT +  
Sbjct: 160 STTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTG 219

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  EKDYPY   +G    C  D+SK+        +     + +   L K GPL+V +N+
Sbjct: 220 GLMREKDYPYTGTDGG--SCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINA 277

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +    PYW+++NSWG 
Sbjct: 278 AYMQTYIGG-------VSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGE 330

Query: 929 IGPDEGFFKIERGNNACGIEQIA 951
              + GF+KI +G N CG++ + 
Sbjct: 331 SWGENGFYKICKGRNICGVDSLV 353



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 175/383 (45%), Gaps = 68/383 (17%)

Query: 237 KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 296
           + +  +  +F+   V+ C     L  ++ D+   +V  L+ E           + F  F 
Sbjct: 6   RVLFSVSLIFVFVSVSVCGDEDVLIRQVVDETEPKV--LSSE-----------DHFTLFK 52

Query: 297 VKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEE-----ILCK 343
            K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E     +  K
Sbjct: 53  KKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVK 112

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
            GFK  +   +  +   + +             P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 113 GGFKLPKDANQAPILPTQNL-------------PEEFDWRDRGAVTPVKNQGSCGSCWSF 159

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG + + TGKLV  S+ QLV+C  +C      S   GC+G  +    EYT +  
Sbjct: 160 STTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTG 219

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  EKDYPY   +G    C  D+SK+        +     + +   L K GPL+V +N+
Sbjct: 220 GLMREKDYPYTGTDGG--SCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINA 277

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  + PYW+ +NSWG 
Sbjct: 278 AYMQTYIGG-------VSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGE 330

Query: 564 IGPDEGFFKIERGNNACGIEQIA 586
              + GF+KI +G N CG++ + 
Sbjct: 331 SWGENGFYKICKGRNICGVDSLV 353



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 117/231 (50%), Gaps = 30/231 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR +    P  +Q  CGSCW+FS  G LEG + + TGKLV  S+ QLV+C  +C
Sbjct: 132 LPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHEC 191

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +  GL  EKDYPY   +G    C  D+SK+     
Sbjct: 192 DPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGG--SCKLDRSKIVASVS 249

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 250 NFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGG-------VSCPYICSRRLNHGVL 302

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           LVGYG       +    PYW+++NSWG    + GF+KI +G N CG++ + 
Sbjct: 303 LVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLV 353



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 7/57 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 1019
            L H VLLVGYG       +  + PYW+++NSWG    + GF+KI +G N CG++ + 
Sbjct: 297  LNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLV 353


>gi|343417244|emb|CCD20093.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 454

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 151/312 (48%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 709
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           T +   ER +E   A R +V + L++V   G  P A DW +K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWGRKGAVTPVKDQGTCGSCWSF 146

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKD 826
           S  G +EGQ+A     L   S+  LV C  + +GC G   + + E+    +   + +EK 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKENSGKVYTEKS 206

Query: 827 YPYKNANGEKFKCAYDKSKV-KLFTGK-DFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           YPY +  GE+  C     KV    TG  D  H    + + K L   GP++V +++     
Sbjct: 207 YPYVSGGGEEPPCKPRGHKVGATITGHVDIPH--DEDAIAKYLADNGPVAVAVDATTFMS 264

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y+G  +     +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N 
Sbjct: 265 YSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQ 320

Query: 945 CGIEQIAGYATI 956
           C + Q A  A +
Sbjct: 321 CLVAQRASSAVV 332



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 148/310 (47%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 343
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           T +   ER +E   A R +V + L++V   G  P A DW +K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWGRKGAVTPVKDQGTCGSCWSF 146

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKD 461
           S  G +EGQ+A     L   S+  LV C  + +GCGG   D   + I   +   + +EK 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKENSGKVYTEKS 206

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           YPY +G GE+  C     KV           +  + + K L   GP++V +++     Y+
Sbjct: 207 YPYVSGGGEEPPCKPRGHKVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATTFMSYS 266

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
           G  +     +C+   L H VLLVGY      PYW+ +NSW     ++G+ +IE+G N C 
Sbjct: 267 GGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCL 322

Query: 582 IEQIAGYATI 591
           + Q A  A +
Sbjct: 323 VAQRASSAVV 332



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 111/222 (50%), Gaps = 11/222 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DW +K    P  DQ  CGSCW+FS  G +EGQ+A     L   S+  LV C  
Sbjct: 117 GKAPAAVDWGRKGAVTPVKDQGTCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDT 176

Query: 69  QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK-DF 123
           + +GC G   + + E+    +   + +EK YPY +  GE+  C     KV    TG  D 
Sbjct: 177 KDNGCGGGLMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDI 236

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            H    + + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY   
Sbjct: 237 PH--DEDAIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDS 290

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
              PYW+++NSW     ++G+ +IE+G N C + Q A  A +
Sbjct: 291 SKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCLVAQRASSAVV 332



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N C + Q A  A 
Sbjct: 272  SCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQCLVAQRASSAV 331

Query: 1024 I 1024
            +
Sbjct: 332  V 332


>gi|1134882|emb|CAA92583.1| cysteine protease [Pisum sativum]
          Length = 350

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 155/317 (48%), Gaps = 34/317 (10%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y + +E+K RF+ F ++       +K+   Y  G + F+D        
Sbjct: 50  SFARFANRYGKRYDSVDEMKLRFKIFSENLELIRSSNKRRLSYKLGVNHFAD-------- 101

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 766
              + W E    R+ A  +     L    K  D  +PD  DWRK+ +     DQ +CGSC
Sbjct: 102 ---WTWEEFRSHRLGA-AQNCSATLKGNHKITDANLPDEKDWRKEGIVSGVKDQGSCGSC 157

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLES 823
           W FS  G LE  YA   GK +  S+ QLV+CA   +  GC G     + EY  +  GLE+
Sbjct: 158 WTFSTTGALESAYAQAFGKNISLSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLET 217

Query: 824 EKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 882
           E+ YPY  +NG  KF+  +   KV    G   +     + +K  +    P+SV    +++
Sbjct: 218 EEAYPYTGSNGLCKFRSEHVAVKV---LGSVNITLGAEDELKHAIAFARPVSVAF--EVV 272

Query: 883 HD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           HD   Y            +P D+ HAVL VGYG +D IPYWL++NSWG    D G+FK+E
Sbjct: 273 HDFRLYKSGVYTSTACGSTPMDVNHAVLAVGYGIEDGIPYWLIKNSWGGDWGDHGYFKME 332

Query: 940 RGNNACGIEQIAGYATI 956
            G N CG+   + Y  +
Sbjct: 333 MGKNMCGVATCSSYPVV 349



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 149/315 (47%), Gaps = 29/315 (9%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y + +E+K RF+ F ++       +K+   Y  G + F+D        
Sbjct: 50  SFARFANRYGKRYDSVDEMKLRFKIFSENLELIRSSNKRRLSYKLGVNHFAD-------- 101

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 400
              + W E    R+ A  +     L    K  D  +PD  DWRK+ +     DQ +CGSC
Sbjct: 102 ---WTWEEFRSHRLGA-AQNCSATLKGNHKITDANLPDEKDWRKEGIVSGVKDQGSCGSC 157

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLES 458
           W FS  G LE  YA   GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GLE+
Sbjct: 158 WTFSTTGALESAYAQAFGKNISLSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLET 217

Query: 459 EKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS-HL 516
           E+ YPY   NG  KF+  +   KV    G   +     + +K  +    P+SV     H 
Sbjct: 218 EEAYPYTGSNGLCKFRSEHVAVKV---LGSVNITLGAEDELKHAIAFARPVSVAFEVVHD 274

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y            +P D+ HAVL VGYG +D IPYWL +NSWG    D G+FK+E G
Sbjct: 275 FRLYKSGVYTSTACGSTPMDVNHAVLAVGYGIEDGIPYWLIKNSWGGDWGDHGYFKMEMG 334

Query: 577 NNACGIEQIAGYATI 591
            N CG+   + Y  +
Sbjct: 335 KNMCGVATCSSYPVV 349



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 12/225 (5%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +PD  DWRK+ +     DQ  CGSCW FS  G LE  YA   GK +  S+ QLV+CA
Sbjct: 130 DANLPDEKDWRKEGIVSGVKDQGSCGSCWTFSTTGALESAYAQAFGKNISLSEQQLVDCA 189

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDF 123
              +  GC G     + EY  +  GLE+E+ YPY  +NG  KF+  +   KV    G   
Sbjct: 190 GAFNNFGCSGGLPSQAFEYIKYNGGLETEEAYPYTGSNGLCKFRSEHVAVKV---LGSVN 246

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGY 180
           +     + +K  +    P+SV    +++HD   Y            +P D+ HAVL VGY
Sbjct: 247 ITLGAEDELKHAIAFARPVSVAF--EVVHDFRLYKSGVYTSTACGSTPMDVNHAVLAVGY 304

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           G +D IPYWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 305 GIEDGIPYWLIKNSWGGDWGDHGYFKMEMGKNMCGVATCSSYPVV 349


>gi|14422331|emb|CAC41636.1| early leaf senescence abundant cysteine protease [Pisum sativum]
          Length = 350

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 155/317 (48%), Gaps = 34/317 (10%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y + +E+K RF+ F ++       +K+   Y  G + F+D        
Sbjct: 50  SFARFANRYGKRYDSVDEMKLRFKIFSENIELIRSSNKRRLSYKLGVNHFAD-------- 101

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 766
              + W E    R+ A  +     L    K  D  +PD  DWRK+ +     DQ +CGSC
Sbjct: 102 ---WTWEEFRSHRLGA-AQNCSATLKGNHKITDANLPDEKDWRKEGIVSGVKDQGSCGSC 157

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLES 823
           W FS  G LE  YA   GK +  S+ QLV+CA   +  GC G     + EY  +  GLE+
Sbjct: 158 WTFSTTGALESAYAQAFGKNISLSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLET 217

Query: 824 EKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 882
           E+ YPY  +NG  KF+  +   KV    G   +     + +K  +    P+SV    +++
Sbjct: 218 EEAYPYTGSNGLCKFRSEHVAVKV---LGSVNITLGAEDELKHAIAFARPVSVAF--EVV 272

Query: 883 HD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           HD   Y            +P D+ HAVL VGYG +D IPYWL++NSWG    D G+FK+E
Sbjct: 273 HDFRLYKSGVYTSTACGSTPMDVNHAVLAVGYGIEDGIPYWLIKNSWGGDWGDHGYFKME 332

Query: 940 RGNNACGIEQIAGYATI 956
            G N CG+   + Y  +
Sbjct: 333 MGKNMCGVATCSSYPVV 349



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 149/315 (47%), Gaps = 29/315 (9%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y + +E+K RF+ F ++       +K+   Y  G + F+D        
Sbjct: 50  SFARFANRYGKRYDSVDEMKLRFKIFSENIELIRSSNKRRLSYKLGVNHFAD-------- 101

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 400
              + W E    R+ A  +     L    K  D  +PD  DWRK+ +     DQ +CGSC
Sbjct: 102 ---WTWEEFRSHRLGA-AQNCSATLKGNHKITDANLPDEKDWRKEGIVSGVKDQGSCGSC 157

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLES 458
           W FS  G LE  YA   GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GLE+
Sbjct: 158 WTFSTTGALESAYAQAFGKNISLSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLET 217

Query: 459 EKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS-HL 516
           E+ YPY   NG  KF+  +   KV    G   +     + +K  +    P+SV     H 
Sbjct: 218 EEAYPYTGSNGLCKFRSEHVAVKV---LGSVNITLGAEDELKHAIAFARPVSVAFEVVHD 274

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y            +P D+ HAVL VGYG +D IPYWL +NSWG    D G+FK+E G
Sbjct: 275 FRLYKSGVYTSTACGSTPMDVNHAVLAVGYGIEDGIPYWLIKNSWGGDWGDHGYFKMEMG 334

Query: 577 NNACGIEQIAGYATI 591
            N CG+   + Y  +
Sbjct: 335 KNMCGVATCSSYPVV 349



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 12/225 (5%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +PD  DWRK+ +     DQ  CGSCW FS  G LE  YA   GK +  S+ QLV+CA
Sbjct: 130 DANLPDEKDWRKEGIVSGVKDQGSCGSCWTFSTTGALESAYAQAFGKNISLSEQQLVDCA 189

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDF 123
              +  GC G     + EY  +  GLE+E+ YPY  +NG  KF+  +   KV    G   
Sbjct: 190 GAFNNFGCSGGLPSQAFEYIKYNGGLETEEAYPYTGSNGLCKFRSEHVAVKV---LGSVN 246

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGY 180
           +     + +K  +    P+SV    +++HD   Y            +P D+ HAVL VGY
Sbjct: 247 ITLGAEDELKHAIAFARPVSVAF--EVVHDFRLYKSGVYTSTACGSTPMDVNHAVLAVGY 304

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           G +D IPYWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 305 GIEDGIPYWLIKNSWGGDWGDHGYFKMEMGKNMCGVATCSSYPVV 349


>gi|198427474|ref|XP_002119872.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 596

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 142/287 (49%), Gaps = 31/287 (10%)

Query: 292 FKAFIVKRGRQYAND-EEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPEEIL 341
           F  F+ K  R Y++  +E  ERFE FK +        + ER    YG ++F D S EE  
Sbjct: 169 FDMFLEKYPRTYSSSSDEYNERFEIFKTNYQVVQHLNEIERGTAVYGITKFMDMSEEE-- 226

Query: 342 CKTGFKWSERTYERIVA---DREKVE-KMLMEVEKDGP-VPDAWDWRKKNVTGPAGDQAA 396
                      Y R +A    R  V  + L   E D   +PD+ DWRK        +Q +
Sbjct: 227 -----------YHRTLAPGFTRPLVPIQTLNSAELDTTNIPDSMDWRKHGAVTEVKNQGS 275

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGL 456
           CGSCWAFS  G +EGQ+ +K  KL+  S+ +LV+C    SGCGG              GL
Sbjct: 276 CGSCWAFSTTGNVEGQWFLKHKKLISLSEQELVDCDTLDSGCGGGLPSNAYKSIEKLGGL 335

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL 516
           E EKDYPY    GE  KCA  +S  K+F             +   L + GP+S+G+N++L
Sbjct: 336 EPEKDYPYV---GEGEKCAIKQSDFKVFVNNSVALPKDEVKLAAWLAQNGPISIGINANL 392

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
           + FY G         C+P  L H VL+VGYG ++  P+W+ +NSWGP
Sbjct: 393 MQFYWGGISHPWKIFCNPKSLDHGVLIVGYGTENGTPFWIIKNSWGP 439



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/289 (35%), Positives = 143/289 (49%), Gaps = 36/289 (12%)

Query: 658 FKAFIVKRGRQYAND-EEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPEEIL 707
           F  F+ K  R Y++  +E  ERFE FK +        + ER    YG ++F D S EE  
Sbjct: 169 FDMFLEKYPRTYSSSSDEYNERFEIFKTNYQVVQHLNEIERGTAVYGITKFMDMSEEE-- 226

Query: 708 CKTGFKWSERTYERIVA---DREKVE-KMLMEVEKDGP-VPDAWDWRKKNVTGPAGDQAA 762
                      Y R +A    R  V  + L   E D   +PD+ DWRK        +Q +
Sbjct: 227 -----------YHRTLAPGFTRPLVPIQTLNSAELDTTNIPDSMDWRKHGAVTEVKNQGS 275

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QA 819
           CGSCWAFS  G +EGQ+ +K  KL+  S+ +LV+C    SGC G    PS  Y       
Sbjct: 276 CGSCWAFSTTGNVEGQWFLKHKKLISLSEQELVDCDTLDSGCGGGL--PSNAYKSIEKLG 333

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GLE EKDYPY    GE  KCA  +S  K+F             +   L + GP+S+ +N+
Sbjct: 334 GLEPEKDYPYV---GEGEKCAIKQSDFKVFVNNSVALPKDEVKLAAWLAQNGPISIGINA 390

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
           +L+  Y G         C+P  L H VL+VGYG ++  P+W+++NSWGP
Sbjct: 391 NLMQFYWGGISHPWKIFCNPKSLDHGVLIVGYGTENGTPFWIIKNSWGP 439



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 8/190 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD+ DWRK        +Q  CGSCWAFS  G +EGQ+ +K  KL+  S+ +LV+C    
Sbjct: 255 IPDSMDWRKHGAVTEVKNQGSCGSCWAFSTTGNVEGQWFLKHKKLISLSEQELVDCDTLD 314

Query: 71  SGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC G    PS  Y       GLE EKDYPY    GE  KCA  +S  K+F         
Sbjct: 315 SGCGGGL--PSNAYKSIEKLGGLEPEKDYPYV---GEGEKCAIKQSDFKVFVNNSVALPK 369

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               +   L + GP+S+ +N++L+  Y G         C+P  L H VL+VGYG ++  P
Sbjct: 370 DEVKLAAWLAQNGPISIGINANLMQFYWGGISHPWKIFCNPKSLDHGVLIVGYGTENGTP 429

Query: 188 YWLVRNSWGP 197
           +W+++NSWGP
Sbjct: 430 FWIIKNSWGP 439



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 42/65 (64%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +PD+ DWRK        +Q +CGSCWAFS  G +EGQ+ +K  KL+  S+ +LV+C    
Sbjct: 475 IPDSMDWRKHGAVTEVKNQGSCGSCWAFSTTGNVEGQWFLKHKKLISLSEQELVDCDTLD 534

Query: 436 SGCGG 440
           SGCGG
Sbjct: 535 SGCGG 539



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +PD+ DWRK        +Q +CGSCWAFS  G +EGQ+ +K  KL+  S+ +LV+C    
Sbjct: 475 IPDSMDWRKHGAVTEVKNQGSCGSCWAFSTTGNVEGQWFLKHKKLISLSEQELVDCDTLD 534

Query: 802 SGCDGCFFEPSIEYTHQAGLES 823
           SGC G    PS  Y     LE+
Sbjct: 535 SGCGGGL--PSNAYKSIEKLEN 554



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD+ DWRK        +Q  CGSCWAFS  G +EGQ+ +K  KL+  S+ +LV+C    
Sbjct: 475 IPDSMDWRKHGAVTEVKNQGSCGSCWAFSTTGNVEGQWFLKHKKLISLSEQELVDCDTLD 534

Query: 71  SGCDGCFFEPSIEYTHQAGLES 92
           SGC G    PS  Y     LE+
Sbjct: 535 SGCGGGL--PSNAYKSIEKLEN 554



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 25/32 (78%)

Query: 965 CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGP 996
           C+P  L H VL+VGYG ++  P+W+++NSWGP
Sbjct: 408 CNPKSLDHGVLIVGYGTENGTPFWIIKNSWGP 439



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 32/44 (72%)

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           ++  P+W+++NSWGP   +EG+++I RG+ +CG+  +A  + +D
Sbjct: 553 ENGTPFWIIKNSWGPDWGEEGYYRIYRGDGSCGLNNMATSSIVD 596



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 32/44 (72%)

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           ++  P+W+++NSWGP   +EG+++I RG+ +CG+  +A  + +D
Sbjct: 553 ENGTPFWIIKNSWGPDWGEEGYYRIYRGDGSCGLNNMATSSIVD 596



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 32/44 (72%)

Query: 982  QDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            ++  P+W+++NSWGP   +EG+++I RG+ +CG+  +A  + +D
Sbjct: 553  ENGTPFWIIKNSWGPDWGEEGYYRIYRGDGSCGLNNMATSSIVD 596



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 31/44 (70%)

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           ++  P+W+ +NSWGP   +EG+++I RG+ +CG+  +A  + +D
Sbjct: 553 ENGTPFWIIKNSWGPDWGEEGYYRIYRGDGSCGLNNMATSSIVD 596


>gi|51969854|dbj|BAD43619.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 361

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 175/383 (45%), Gaps = 69/383 (18%)

Query: 603 KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 662
           + +  +  +F+   V+ C     L  ++ D+   +V  L+ E           + F  F 
Sbjct: 6   RVLFSVSLIFVFVSVSVCGDEDVLIRQVVDETEPKV--LSSE-----------DHFTLFK 52

Query: 663 VKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEE-----ILCK 709
            K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E     +  K
Sbjct: 53  KKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVK 112

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
            GFK  +   +  +   + +             P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 113 GGFKLPKDANQAPILPTQNL-------------PEEFDWRDRGAVTPVKNQGSCGSCWSF 159

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG + + TGKLV  S+ QLV+C  +C         SGC+G     + EYT +  
Sbjct: 160 STTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGRLMNSAFEYTLKTG 219

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  EKDYPY   +G    C  D+SK+        +     + +   L K GPL+V +N+
Sbjct: 220 GLMREKDYPYTGTDGG--SCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINA 277

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +    PYW+++NSWG 
Sbjct: 278 AYMQTYIGG-------VSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGE 330

Query: 929 IGPDEGFFKIERGNNACGIEQIA 951
              + GF+KI +G N CG++ + 
Sbjct: 331 SWGENGFYKICKGRNICGVDSLV 353



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 175/383 (45%), Gaps = 68/383 (17%)

Query: 237 KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 296
           + +  +  +F+   V+ C     L  ++ D+   +V  L+ E           + F  F 
Sbjct: 6   RVLFSVSLIFVFVSVSVCGDEDVLIRQVVDETEPKV--LSSE-----------DHFTLFK 52

Query: 297 VKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEE-----ILCK 343
            K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E     +  K
Sbjct: 53  KKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVK 112

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
            GFK  +   +  +   + +             P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 113 GGFKLPKDANQAPILPTQNL-------------PEEFDWRDRGAVTPVKNQGSCGSCWSF 159

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG + + TGKLV  S+ QLV+C  +C      S   GC+G  +    EYT +  
Sbjct: 160 STTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGRLMNSAFEYTLKTG 219

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  EKDYPY   +G    C  D+SK+        +     + +   L K GPL+V +N+
Sbjct: 220 GLMREKDYPYTGTDGG--SCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINA 277

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  + PYW+ +NSWG 
Sbjct: 278 AYMQTYIGG-------VSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGE 330

Query: 564 IGPDEGFFKIERGNNACGIEQIA 586
              + GF+KI +G N CG++ + 
Sbjct: 331 SWGENGFYKICKGRNICGVDSLV 353



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 117/231 (50%), Gaps = 30/231 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR +    P  +Q  CGSCW+FS  G LEG + + TGKLV  S+ QLV+C  +C
Sbjct: 132 LPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHEC 191

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +  GL  EKDYPY   +G    C  D+SK+     
Sbjct: 192 DPEEEGSCDSGCNGRLMNSAFEYTLKTGGLMREKDYPYTGTDGG--SCKLDRSKIVASVS 249

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 250 NFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGG-------VSCPYICSRRLNHGVL 302

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           LVGYG       +    PYW+++NSWG    + GF+KI +G N CG++ + 
Sbjct: 303 LVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLV 353



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 7/57 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 1019
            L H VLLVGYG       +  + PYW+++NSWG    + GF+KI +G N CG++ + 
Sbjct: 297  LNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLV 353


>gi|18420375|ref|NP_568052.1| cysteine proteinase RD19a [Arabidopsis thaliana]
 gi|1172872|sp|P43296.1|RD19A_ARATH RecName: Full=Cysteine proteinase RD19a; Short=RD19; Flags:
           Precursor
 gi|435618|dbj|BAA02373.1| thiol protease [Arabidopsis thaliana]
 gi|4539328|emb|CAB38829.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|7270892|emb|CAB80572.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|19310552|gb|AAL85009.1| putative cysteine proteinase RD19A [Arabidopsis thaliana]
 gi|22136868|gb|AAM91778.1| putative cysteine proteinase RD19A [Arabidopsis thaliana]
 gi|110740898|dbj|BAE98545.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|332661616|gb|AEE87016.1| cysteine proteinase RD19a [Arabidopsis thaliana]
          Length = 368

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 157/330 (47%), Gaps = 46/330 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           F  F  K G+ YA++EE   RF  FK +  +  +H++      +G ++FSD +  E   K
Sbjct: 51  FSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKK 110

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                  R+  ++  D  K   +  E      +P+ +DWR      P  +Q +CGSCW+F
Sbjct: 111 ---HLGVRSGFKLPKDANKAPILPTE-----NLPEDFDWRDHGAVTPVKNQGSCGSCWSF 162

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G     + EYT +  
Sbjct: 163 SATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTG 222

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY   +G+   C  DKSK+        +     E +   L K GPL+V +N+
Sbjct: 223 GLMKEEDYPYTGKDGK--TCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINA 280

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +    PYW+++NSWG 
Sbjct: 281 GYMQTYIGG-------VSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGE 333

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATIDV 958
              + GF+KI +G N CG++ +       V
Sbjct: 334 TWGENGFYKICKGRNICGVDSMVSTVAATV 363



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 157/330 (47%), Gaps = 45/330 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           F  F  K G+ YA++EE   RF  FK +  +  +H++      +G ++FSD +  E   K
Sbjct: 51  FSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKK 110

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                  R+  ++  D  K   +  E      +P+ +DWR      P  +Q +CGSCW+F
Sbjct: 111 ---HLGVRSGFKLPKDANKAPILPTE-----NLPEDFDWRDHGAVTPVKNQGSCGSCWSF 162

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G  +    EYT +  
Sbjct: 163 SATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTG 222

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY   +G+   C  DKSK+        +     E +   L K GPL+V +N+
Sbjct: 223 GLMKEEDYPYTGKDGK--TCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINA 280

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  + PYW+ +NSWG 
Sbjct: 281 GYMQTYIGG-------VSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGE 333

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATIDV 593
              + GF+KI +G N CG++ +       V
Sbjct: 334 TWGENGFYKICKGRNICGVDSMVSTVAATV 363



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 117/238 (49%), Gaps = 30/238 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR      P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 135 LPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +  GL  E+DYPY   +G+   C  DKSK+     
Sbjct: 195 DPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGK--TCKLDKSKIVASVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 253 NFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGG-------VSCPYICTRRLNHGVL 305

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           LVGYG       +    PYW+++NSWG    + GF+KI +G N CG++ +       V
Sbjct: 306 LVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATV 363


>gi|113603|sp|P05167.1|ALEU_HORVU RecName: Full=Thiol protease aleurain; Flags: Precursor
 gi|19021|emb|CAA28804.1| aleurain [Hordeum vulgare]
          Length = 362

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 161/343 (46%), Gaps = 34/343 (9%)

Query: 630 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 689
           +TD+  + +++ A+ G+L      +   F  F V+ G+ Y +  E++ RF  F +   + 
Sbjct: 36  VTDRAASTLES-AVLGALGRTRHAL--RFARFAVRYGKSYESAAEVRRRFRIFSESLEEV 92

Query: 690 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME--VEKD 739
                     R G + FSD S           W E    R+ A +     +     +   
Sbjct: 93  RSTNRKGLPYRLGINRFSDMS-----------WEEFQATRLGAAQTCSATLAGNHLMRDA 141

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
             +P+  DWR+  +  P  +QA CGSCW FS  G LE  Y   TGK +  S+ QLV+CA 
Sbjct: 142 AALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAG 201

Query: 800 QCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDF 854
             +  GC+G     + EY  +  G+++E+ YPYK  NG    C Y  + + V++    + 
Sbjct: 202 GFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNG---VCHYKAENAAVQVLDSVN- 257

Query: 855 LHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 913
           +  N  + +K  +    P+SV     D    Y       +    +P D+ HAVL VGYG 
Sbjct: 258 ITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGV 317

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           ++ +PYWL++NSWG    D G+FK+E G N C I   A Y  +
Sbjct: 318 ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVV 360



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 161/344 (46%), Gaps = 35/344 (10%)

Query: 264 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 323
           +TD+  + +++ A+ G+L      +   F  F V+ G+ Y +  E++ RF  F +   + 
Sbjct: 36  VTDRAASTLES-AVLGALGRTRHAL--RFARFAVRYGKSYESAAEVRRRFRIFSESLEEV 92

Query: 324 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME--VEKD 373
                     R G + FSD S           W E    R+ A +     +     +   
Sbjct: 93  RSTNRKGLPYRLGINRFSDMS-----------WEEFQATRLGAAQTCSATLAGNHLMRDA 141

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
             +P+  DWR+  +  P  +QA CGSCW FS  G LE  Y   TGK +  S+ QLV+CA 
Sbjct: 142 AALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAG 201

Query: 434 QCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAY--DKSKVKLFTGKDF 489
             +  G   GL  Q  EY  +  G+++E+ YPY+  NG    C Y  + + V++    + 
Sbjct: 202 GFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNG---VCHYKAENAAVQVLDSVN- 257

Query: 490 LYFNGSETMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG 547
           +  N  + +K  +    P+SV          + +G     +  T +P D+ HAVL VGYG
Sbjct: 258 ITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVYTSDHCGT-TPDDVNHAVLAVGYG 316

Query: 548 KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
            ++ +PYWL +NSWG    D G+FK+E G N C I   A Y  +
Sbjct: 317 VENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVV 360



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  +QA CGSCW FS  G LE  Y   TGK +  S+ QLV+CA   
Sbjct: 144 LPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGF 203

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLH 125
           +  GC+G     + EY  +  G+++E+ YPYK  NG    C Y  + + V++    + + 
Sbjct: 204 NNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNG---VCHYKAENAAVQVLDSVN-IT 259

Query: 126 FNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
            N  + +K  +    P+SV     D    Y       +    +P D+ HAVL VGYG ++
Sbjct: 260 LNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVEN 319

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +PYWL++NSWG    D G+FK+E G N C I   A Y  +
Sbjct: 320 GVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVV 360



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +P D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N C I   A Y  +
Sbjct: 302  TPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVV 360


>gi|343471272|emb|CCD16264.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 154/320 (48%), Gaps = 28/320 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE+  +  +    + Y   +    KV  +       G  P A DWRKK    P  DQ  C
Sbjct: 95  EEL--RATYLNGAKYYAAALKRPRKVVNV-----STGKAPPAVDWRKKGAVTPVKDQRKC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   + ++++   +++  
Sbjct: 148 GSCWAFSATGNIEGQWKVAGHELTSLSEQMLVSCDNMDDGCQGGLMDRALKWIVSSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI---LYKYGPLSVLL 877
           + +E+ YPY + +G+   C       K+   K   H N  +    I   L K GP+++ +
Sbjct: 208 VFTEESYPYDSTDGDVPPCNMSG---KVVGAKISGHINLPKDENAIAEWLAKNGPVAIAV 264

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           ++    DY G  +     +CS   L H VLLVGY      PYW+++NSWG    +EG+ +
Sbjct: 265 DASSFLDYKGGVL----TSCSSDALNHDVLLVGYDDTSKPPYWIIKNSWGKKWGEEGYIR 320

Query: 938 IERGNNACGIEQIAGYATID 957
           +E+G N C +++ A  A + 
Sbjct: 321 VEKGTNQCLMKEYARSAVVS 340



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 146/317 (46%), Gaps = 21/317 (6%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE+  +  +    + Y   +    KV  +       G  P A DWRKK    P  DQ  C
Sbjct: 95  EEL--RATYLNGAKYYAAALKRPRKVVNV-----STGKAPPAVDWRKKGAVTPVKDQRKC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   D   + I  +++  
Sbjct: 148 GSCWAFSATGNIEGQWKVAGHELTSLSEQMLVSCDNMDDGCQGGLMDRALKWIVSSNKGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           + +E+ YPY + +G+   C      V                + + L K GP+++ +++ 
Sbjct: 208 VFTEESYPYDSTDGDVPPCNMSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVDAS 267

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
               Y G  +     +CS   L H VLLVGY      PYW+ +NSWG    +EG+ ++E+
Sbjct: 268 SFLDYKGGVL----TSCSSDALNHDVLLVGYDDTSKPPYWIIKNSWGKKWGEEGYIRVEK 323

Query: 576 GNNACGIEQIAGYATID 592
           G N C +++ A  A + 
Sbjct: 324 GTNQCLMKEYARSAVVS 340



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 115/224 (51%), Gaps = 13/224 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWRKK    P  DQ  CGSCWAFS  G +EGQ+ +   +L   S+  LV C  
Sbjct: 124 GKAPPAVDWRKKGAVTPVKDQRKCGSCWAFSATGNIEGQWKVAGHELTSLSEQMLVSCDN 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G   + ++++   +++  + +E+ YPY + +G+   C       K+   K   H
Sbjct: 184 MDDGCQGGLMDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPCNMSG---KVVGAKISGH 240

Query: 126 FNGSETMKKI---LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            N  +    I   L K GP+++ +++    DY G  +     +CS   L H VLLVGY  
Sbjct: 241 INLPKDENAIAEWLAKNGPVAIAVDASSFLDYKGGVL----TSCSSDALNHDVLLVGYDD 296

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
               PYW+++NSWG    +EG+ ++E+G N C +++ A  A + 
Sbjct: 297 TSKPPYWIIKNSWGKKWGEEGYIRVEKGTNQCLMKEYARSAVVS 340



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +CS   L H VLLVGY      PYW+++NSWG    +EG+ ++E+G N C +++ A  A 
Sbjct: 279  SCSSDALNHDVLLVGYDDTSKPPYWIIKNSWGKKWGEEGYIRVEKGTNQCLMKEYARSAV 338

Query: 1024 ID 1025
            + 
Sbjct: 339  VS 340


>gi|118485910|gb|ABK94801.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 155/327 (47%), Gaps = 46/327 (14%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 704
           N    F +F  K G+ YA  EE   RF  FK +    KKH+       +G ++FSD +P+
Sbjct: 46  NAEHHFTSFKSKFGKTYATQEEHDYRFGVFKANLRRAKKHQMIDPTAAHGVTKFSDLTPK 105

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E   +  F   +R   R+  D  K   +         +P  +DWR         DQ +CG
Sbjct: 106 EF--RRQFLGLKRRL-RLPTDANKAPILPTT-----DLPTDYDWRDHGAVTEVKDQGSCG 157

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCW+FS  G LEG + + TG+L   S+ QLV+C  +C         SGCDG     + EY
Sbjct: 158 SCWSFSATGALEGAHYLATGELASLSEQQLVDCDHECDPEEYGACDSGCDGGLMNNAFEY 217

Query: 816 THQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
             +A GLE E+DYPY   +G    C +DKSKV        +     + +   L K+GPLS
Sbjct: 218 ALKAGGLEREEDYPYTGTDGG--TCKFDKSKVVASVSNFSVVSIDEDQIAANLVKHGPLS 275

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVLLVGYGKQ-------DNIPYWLVR 923
           V +N+  +  Y G           PY       H VLLVGYG            P+W+++
Sbjct: 276 VAINAAFMQTYVGG-------VSCPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPFWIIK 328

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQI 950
           NSWG    + G++KI RG N CG++ +
Sbjct: 329 NSWGQNWGENGYYKICRGRNICGVDSM 355



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 159/339 (46%), Gaps = 46/339 (13%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 338
           N    F +F  K G+ YA  EE   RF  FK +    KKH+       +G ++FSD +P+
Sbjct: 46  NAEHHFTSFKSKFGKTYATQEEHDYRFGVFKANLRRAKKHQMIDPTAAHGVTKFSDLTPK 105

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E   +  F   +R   R+  D  K   +         +P  +DWR         DQ +CG
Sbjct: 106 EF--RRQFLGLKRRL-RLPTDANKAPILPTT-----DLPTDYDWRDHGAVTEVKDQGSCG 157

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-----GC-GGCDG--LEQPIEY 450
           SCW+FS  G LEG + + TG+L   S+ QLV+C  +C       C  GCDG  +    EY
Sbjct: 158 SCWSFSATGALEGAHYLATGELASLSEQQLVDCDHECDPEEYGACDSGCDGGLMNNAFEY 217

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
             +A GLE E+DYPY   +G    C +DKSKV        +     + +   L K+GPLS
Sbjct: 218 ALKAGGLEREEDYPYTGTDGG--TCKFDKSKVVASVSNFSVVSIDEDQIAANLVKHGPLS 275

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLG----HAVLLVGYGKQ-------DDIPYWLAR 558
           V +N+  +  Y G           PY       H VLLVGYG          + P+W+ +
Sbjct: 276 VAINAAFMQTYVGG-------VSCPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPFWIIK 328

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVVIQ 596
           NSWG    + G++KI RG N CG++  ++  A I    Q
Sbjct: 329 NSWGQNWGENGYYKICRGRNICGVDSMVSTVAAIHTTAQ 367



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 118/242 (48%), Gaps = 31/242 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         DQ  CGSCW+FS  G LEG + + TG+L   S+ QLV+C  +C
Sbjct: 135 LPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGCDG     + EY  +A GLE E+DYPY   +G    C +DKSKV     
Sbjct: 195 DPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGG--TCKFDKSKVVASVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVL 176
              +     + +   L K+GPLSV +N+  +  Y G           PY       H VL
Sbjct: 253 NFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGG-------VSCPYICSKRQDHGVL 305

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVV 228
           LVGYG            P+W+++NSWG    + G++KI RG N CG++  ++  A I   
Sbjct: 306 LVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAAIHTT 365

Query: 229 IQ 230
            Q
Sbjct: 366 AQ 367



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 7/54 (12%)

Query: 972  HAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            H VLLVGYG          + P+W+++NSWG    + G++KI RG N CG++ +
Sbjct: 302  HGVLLVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSM 355


>gi|426252044|ref|XP_004019728.1| PREDICTED: cathepsin W [Ovis aries]
          Length = 375

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 171/364 (46%), Gaps = 49/364 (13%)

Query: 643 IEGSLTFDN-----ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------ 691
           I+GSL   +     + + E F+ F ++  R Y N  E   R + F Q+  K         
Sbjct: 22  IKGSLRGQDPGPQPQELKEVFRLFQMQYNRSYPNPAEHARRLDIFAQNLAKAQRLQEEDL 81

Query: 692 ---RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 748
               +G ++FSD + EE +   G         R+  +   V + +   E     P   DW
Sbjct: 82  GTAEFGVTQFSDLTEEEFVQLYG--------SRVAGEALGVSRKVGSEEWGESQPPTCDW 133

Query: 749 RKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGC 807
           R K N   P  +Q  C  CWA + AG +E  +AIK  + VE    +L++C +  +GC G 
Sbjct: 134 RNKPNTISPVRNQRHCNCCWAMAAAGNIEALWAIKFNRSVEERGGELLDCDRCGNGCKGG 193

Query: 808 F-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKK 865
           F ++  +      GL SE DYP+ + +G+  +C  +K K K+   +DF+     E ++ +
Sbjct: 194 FVWDAFLTVLKNRGLASETDYPF-DGSGKTHRCLAEKHK-KVAWIQDFIMLQACEQSIAR 251

Query: 866 ILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI-------- 917
            L   GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK  ++        
Sbjct: 252 HLATQGPITVTINVKLLQQYQKGVIKATPTTCDPRHVDHSVLLVGFGKTKSVEGRQGKAA 311

Query: 918 ------------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKNDE-- 963
                        YW ++NSWGP   +EG+F++ RG+N CGI +    A +D+ K  +  
Sbjct: 312 SFRSYTRPRRSMAYWTLKNSWGPHWGEEGYFRLHRGSNTCGITKYPVTAIVDIPKKKQQV 371

Query: 964 TCSP 967
           +C P
Sbjct: 372 SCPP 375



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 163/353 (46%), Gaps = 46/353 (13%)

Query: 277 IEGSLTFDN-----ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------ 325
           I+GSL   +     + + E F+ F ++  R Y N  E   R + F Q+  K         
Sbjct: 22  IKGSLRGQDPGPQPQELKEVFRLFQMQYNRSYPNPAEHARRLDIFAQNLAKAQRLQEEDL 81

Query: 326 ---RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 382
               +G ++FSD + EE +   G         R+  +   V + +   E     P   DW
Sbjct: 82  GTAEFGVTQFSDLTEEEFVQLYG--------SRVAGEALGVSRKVGSEEWGESQPPTCDW 133

Query: 383 RKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGC 441
           R K N   P  +Q  C  CWA + AG +E  +AIK  + VE    +L++C +  +GC G 
Sbjct: 134 RNKPNTISPVRNQRHCNCCWAMAAAGNIEALWAIKFNRSVEERGGELLDCDRCGNGCKGG 193

Query: 442 DGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKK 500
              +  +      GL SE DYP+ +G+G+  +C  +K K K+   +DF+     E ++ +
Sbjct: 194 FVWDAFLTVLKNRGLASETDYPF-DGSGKTHRCLAEKHK-KVAWIQDFIMLQACEQSIAR 251

Query: 501 ILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI-------- 552
            L   GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK   +        
Sbjct: 252 HLATQGPITVTINVKLLQQYQKGVIKATPTTCDPRHVDHSVLLVGFGKTKSVEGRQGKAA 311

Query: 553 ------------PYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 593
                        YW  +NSWGP   +EG+F++ RG+N CGI +    A +D+
Sbjct: 312 SFRSYTRPRRSMAYWTLKNSWGPHWGEEGYFRLHRGSNTCGITKYPVTAIVDI 364



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 25/239 (10%)

Query: 12  PDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           P   DWR K N   P  +Q  C  CWA + AG +E  +AIK  + VE    +L++C +  
Sbjct: 128 PPTCDWRNKPNTISPVRNQRHCNCCWAMAAAGNIEALWAIKFNRSVEERGGELLDCDRCG 187

Query: 71  SGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           +GC G F ++  +      GL SE DYP+ + +G+  +C  +K K K+   +DF+     
Sbjct: 188 NGCKGGFVWDAFLTVLKNRGLASETDYPF-DGSGKTHRCLAEKHK-KVAWIQDFIMLQAC 245

Query: 130 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI-- 186
           E ++ + L   GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK  ++  
Sbjct: 246 EQSIARHLATQGPITVTINVKLLQQYQKGVIKATPTTCDPRHVDHSVLLVGFGKTKSVEG 305

Query: 187 ------------------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
                              YW ++NSWGP   +EG+F++ RG+N CGI +    A +D+
Sbjct: 306 RQGKAASFRSYTRPRRSMAYWTLKNSWGPHWGEEGYFRLHRGSNTCGITKYPVTAIVDI 364



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 20/83 (24%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDI--------------------PYWLVRNSWGPIGPDEGF 1003
            TC P  + H+VLLVG+GK   +                     YW ++NSWGP   +EG+
Sbjct: 282  TCDPRHVDHSVLLVGFGKTKSVEGRQGKAASFRSYTRPRRSMAYWTLKNSWGPHWGEEGY 341

Query: 1004 FKIERGNNACGIEQIAGYATIDV 1026
            F++ RG+N CGI +    A +D+
Sbjct: 342  FRLHRGSNTCGITKYPVTAIVDI 364


>gi|7381219|gb|AAF61440.1|AF138264_1 papain-like cysteine proteinase isoform I [Ipomoea batatas]
          Length = 368

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 177/382 (46%), Gaps = 51/382 (13%)

Query: 611 VFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYA 670
           +FL   +A+   + +  D   D V+ R     + G    D  N    F  F  + G+ YA
Sbjct: 8   LFLCTLLATTSLVFAAEDDDGDDVLIR----QVVGDGDGDLLNADHHFTVFKRRFGKAYA 63

Query: 671 NDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERI 722
           +DEE   R   FK +    K+H+       +G ++FSD +P E   +  F    R   + 
Sbjct: 64  SDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDLTPTEF--RRKFLGLNRRL-KF 120

Query: 723 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 782
            AD  K   +L   E    +P  +DWR      P  +Q  CGSCW+FS  G LEG   + 
Sbjct: 121 PAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGALEGANFLA 175

Query: 783 TGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNA 832
           TGKLV  S+ QLV+C  +C         SGC+G     + EYT +A GL  E+DYPY   
Sbjct: 176 TGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGN 235

Query: 833 NGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK 892
           + +   C +DK+K+        +     + +   L K GPL+V +N+  +  Y G     
Sbjct: 236 DLQ--VCRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG---- 289

Query: 893 NDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
                 PY     L H VLLVGYG       +    PYW+++NSWG    + G++KI RG
Sbjct: 290 ---VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRG 346

Query: 942 NNACGIEQ-IAGYATIDVVKND 962
            N CG++  ++  A +    +D
Sbjct: 347 RNVCGVDSMVSTVAAVSTTTSD 368



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 173/369 (46%), Gaps = 49/369 (13%)

Query: 245 VFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYA 304
           +FL   +A+   + +  D   D V+ R     + G    D  N    F  F  + G+ YA
Sbjct: 8   LFLCTLLATTSLVFAAEDDDGDDVLIR----QVVGDGDGDLLNADHHFTVFKRRFGKAYA 63

Query: 305 NDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERI 356
           +DEE   R   FK +    K+H+       +G ++FSD +P E   +  F    R   + 
Sbjct: 64  SDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDLTPTEF--RRKFLGLNRRL-KF 120

Query: 357 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 416
            AD  K   +L   E    +P  +DWR      P  +Q  CGSCW+FS  G LEG   + 
Sbjct: 121 PAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGALEGANFLA 175

Query: 417 TGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA-GLESEKDYPYRNG 467
           TGKLV  S+ QLV+C  +C      S   GC+G  +    EYT +A GL  E+DYPY  G
Sbjct: 176 TGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY-TG 234

Query: 468 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRK 527
           N  +  C +DK+K+        +     + +   L K GPL+V +N+  +  Y G     
Sbjct: 235 NDLQV-CRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG---- 289

Query: 528 NDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIERG 576
                 PY     L H VLLVGYG       +  + PYW+ +NSWG    + G++KI RG
Sbjct: 290 ---VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRG 346

Query: 577 NNACGIEQI 585
            N CG++ +
Sbjct: 347 RNVCGVDSM 355



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 116/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR      P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 135 LPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY   + +   C +DK+K+     
Sbjct: 195 DPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQ--VCRFDKTKIAAKVA 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 253 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVL 305

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 306 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 355



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  A  I  +     I  V     CS   L H VLLVGYG       +  + PYW++
Sbjct: 269  VKNGPLAVAINAVFMQTYIGGVSCPYICSKR-LDHGVLLVGYGSAGYAPIRMKEKPYWII 327

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    + G++KI RG N CG++ +
Sbjct: 328  KNSWGESWGENGYYKICRGRNVCGVDSM 355


>gi|343470378|emb|CCD16903.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 159/319 (49%), Gaps = 26/319 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +     +  A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYLNGAKYYAAALKRPRKVVNVS-TGKAPPAIDWRKKGAVTPVKDQGKC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G F + ++++   +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDNMDYGCRGGFLDRALKWIVSSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLN 878
           + +E+ YPY + +G+   C  +KS KV        ++    E  + + L K GP+++ ++
Sbjct: 208 VFTEESYPYDSTDGDVPPC--NKSGKVVGAKISGLINLPKDENAIAEWLAKNGPIAIAVD 265

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +    DY G  +     +CS   L H VLLVGY      PYW+++NSWG    +EG+ ++
Sbjct: 266 ASSFLDYTGGVL----TSCSSDALNHGVLLVGYDDSSKPPYWIIKNSWGKKWGEEGYIRV 321

Query: 939 ERGNNACGIEQIAGYATID 957
           E+G N C +++ A  A + 
Sbjct: 322 EKGTNQCLMKEYARSAVVS 340



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 147/317 (46%), Gaps = 21/317 (6%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +     +  A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYLNGAKYYAAALKRPRKVVNVS-TGKAPPAIDWRKKGAVTPVKDQGKC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   D   + I  +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDNMDYGCRGGFLDRALKWIVSSNKGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           + +E+ YPY + +G+   C      V                + + L K GP+++ +++ 
Sbjct: 208 VFTEESYPYDSTDGDVPPCNKSGKVVGAKISGLINLPKDENAIAEWLAKNGPIAIAVDAS 267

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
               Y G  +     +CS   L H VLLVGY      PYW+ +NSWG    +EG+ ++E+
Sbjct: 268 SFLDYTGGVL----TSCSSDALNHGVLLVGYDDSSKPPYWIIKNSWGKKWGEEGYIRVEK 323

Query: 576 GNNACGIEQIAGYATID 592
           G N C +++ A  A + 
Sbjct: 324 GTNQCLMKEYARSAVVS 340



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 119/223 (53%), Gaps = 11/223 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWRKK    P  DQ  CGSCWAFS  G +EGQ+ +   +L   S+  LV C  
Sbjct: 124 GKAPPAIDWRKKGAVTPVKDQGKCGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDN 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFL 124
              GC G F + ++++   +++  + +E+ YPY + +G+   C  +KS KV        +
Sbjct: 184 MDYGCRGGFLDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPC--NKSGKVVGAKISGLI 241

Query: 125 HFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +    E  + + L K GP+++ +++    DY G  +     +CS   L H VLLVGY   
Sbjct: 242 NLPKDENAIAEWLAKNGPIAIAVDASSFLDYTGGVL----TSCSSDALNHGVLLVGYDDS 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
              PYW+++NSWG    +EG+ ++E+G N C +++ A  A + 
Sbjct: 298 SKPPYWIIKNSWGKKWGEEGYIRVEKGTNQCLMKEYARSAVVS 340



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 19/119 (15%)

Query: 908  LVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKNDETCS 966
            L+   K +N I  WL +N    I  D   F          ++   G  T        +CS
Sbjct: 240  LINLPKDENAIAEWLAKNGPIAIAVDASSF----------LDYTGGVLT--------SCS 281

Query: 967  PYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
               L H VLLVGY      PYW+++NSWG    +EG+ ++E+G N C +++ A  A + 
Sbjct: 282  SDALNHGVLLVGYDDSSKPPYWIIKNSWGKKWGEEGYIRVEKGTNQCLMKEYARSAVVS 340


>gi|332375406|gb|AEE62844.1| unknown [Dendroctonus ponderosae]
          Length = 320

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 157/316 (49%), Gaps = 31/316 (9%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHE------RYGTSEFSDRSP 703
           + F+AF +K+ + Y    E   R+  F+      ++ + + E      + G ++FSD + 
Sbjct: 21  DAFQAFKLKQNKTYKTPVEETTRYGIFQAKLLEIEEHNSRFEQGLETYKKGVNKFSDWTQ 80

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           +E             Y  +     K+ K +  V+    VP + DWR +       +Q  C
Sbjct: 81  DEF----------NAYLGLHPKPAKLGKGIPYVKTGVSVPASVDWRTEGYVTGVKNQGDC 130

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGL 821
           GSCWAFS+ G +EG     TGKLV  S+ QLV+C       GCDG + E +  Y  + GL
Sbjct: 131 GSCWAFSLTGSVEGALFKSTGKLVSLSEQQLVDCTYGTVNFGCDGGYLEETFPYIQETGL 190

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG-SETMKKILYKYGPLSVLLNSD 880
           E+E  YPYK  +G    C +D SKV +    D++++ G  E + +     GP+SV ++++
Sbjct: 191 EAEASYPYKARDG---TCKFDASKV-VTKINDYVYWYGDEEALLEATATIGPISVAMDAN 246

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            I  Y       +   CS  DL H VL+VGYG ++ + YWLV+NSW     + G+ K+ R
Sbjct: 247 YIDSYASGVF--SSRLCSSDDLNHGVLVVGYGSENGVNYWLVKNSWAEDWGESGYLKLLR 304

Query: 941 GNNACGIEQIAGYATI 956
           G N CGI +   Y  +
Sbjct: 305 GQNECGIAEDDSYPIV 320



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 120/218 (55%), Gaps = 9/218 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VP + DWR +       +Q DCGSCWAFS+ G +EG     TGKLV  S+ QLV+C    
Sbjct: 109 VPASVDWRTEGYVTGVKNQGDCGSCWAFSLTGSVEGALFKSTGKLVSLSEQQLVDCTYGT 168

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
              GCDG + E +  Y  + GLE+E  YPYK  +G    C +D SKV +    D++++ G
Sbjct: 169 VNFGCDGGYLEETFPYIQETGLEAEASYPYKARDG---TCKFDASKV-VTKINDYVYWYG 224

Query: 129 -SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E + +     GP+SV ++++ I  Y       +   CS  DL H VL+VGYG ++ + 
Sbjct: 225 DEEALLEATATIGPISVAMDANYIDSYASGVF--SSRLCSSDDLNHGVLVVGYGSENGVN 282

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           YWLV+NSW     + G+ K+ RG N CGI +   Y  +
Sbjct: 283 YWLVKNSWAEDWGESGYLKLLRGQNECGIAEDDSYPIV 320



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 156/317 (49%), Gaps = 32/317 (10%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHE------RYGTSEFSDRSP 337
           + F+AF +K+ + Y    E   R+  F+      ++ + + E      + G ++FSD + 
Sbjct: 21  DAFQAFKLKQNKTYKTPVEETTRYGIFQAKLLEIEEHNSRFEQGLETYKKGVNKFSDWTQ 80

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           +E             Y  +     K+ K +  V+    VP + DWR +       +Q  C
Sbjct: 81  DEF----------NAYLGLHPKPAKLGKGIPYVKTGVSVPASVDWRTEGYVTGVKNQGDC 130

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQAG 455
           GSCWAFS+ G +EG     TGKLV  S+ QLV+C       G CDG  LE+   Y  + G
Sbjct: 131 GSCWAFSLTGSVEGALFKSTGKLVSLSEQQLVDCTYGTVNFG-CDGGYLEETFPYIQETG 189

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG-SETMKKILYKYGPLSVGLNS 514
           LE+E  YPY+  +G    C +D SKV +    D++Y+ G  E + +     GP+SV +++
Sbjct: 190 LEAEASYPYKARDG---TCKFDASKV-VTKINDYVYWYGDEEALLEATATIGPISVAMDA 245

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
           + I  Y       +   CS  DL H VL+VGYG ++ + YWL +NSW     + G+ K+ 
Sbjct: 246 NYIDSYASGVF--SSRLCSSDDLNHGVLVVGYGSENGVNYWLVKNSWAEDWGESGYLKLL 303

Query: 575 RGNNACGIEQIAGYATI 591
           RG N CGI +   Y  +
Sbjct: 304 RGQNECGIAEDDSYPIV 320


>gi|317106675|dbj|BAJ53178.1| JHL18I08.12 [Jatropha curcas]
          Length = 368

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 178/381 (46%), Gaps = 56/381 (14%)

Query: 600 LEKKAIMLIQAVFLLC-GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETF 658
           +E++ ++      LL   +AS      L D +  QVV   D   +      + E+   TF
Sbjct: 1   MERRCLISFLVYALLSFTIASTTSPDELDDPLIRQVVPDGDQDHL-----LNAEHHFTTF 55

Query: 659 KAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKT 710
           KA   K G+ YA  EE   RF+ FK +  +  KH+       +G + FSD +P E     
Sbjct: 56  KA---KFGKTYATQEEHDYRFKLFKANLRRARKHQMMDPTAVHGVTMFSDLTPREF---- 108

Query: 711 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 770
                 R Y  +   R   +     +     +P  +DWR         +Q +CGSCW+FS
Sbjct: 109 -----RRQYLGLRRLRLPADAHEAPILPTNDLPTDFDWRDHGAVTNVKNQGSCGSCWSFS 163

Query: 771 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-G 820
            AG LEG + + TG+LV  S+ QLV+C  +C         SGC+G     + EYT +A G
Sbjct: 164 AAGALEGAHFLATGELVSLSEQQLVDCDHECDPEEYGACDSGCNGGLMTTAFEYTLKAGG 223

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           LE E+DYPY     ++  C +D++K+        +     + +   L K+GPL+V +N+ 
Sbjct: 224 LEREEDYPY--TGNDRGPCKFDRNKIVASVSNFSVVSIDEDQIAANLVKHGPLAVGINAV 281

Query: 881 LIHDYNGTPIRKNDETCSPYDLG----HAVLLVGYG-------KQDNIPYWLVRNSWGPI 929
            +  Y G           PY       H VLLVGYG       +  + P+W+++NSWG  
Sbjct: 282 FMQTYMGG-------VSCPYICSKRQDHGVLLVGYGSAGYAPIRLKDKPFWIIKNSWGES 334

Query: 930 GPDEGFFKIERGNNACGIEQI 950
             + G+++I RG N CG++ +
Sbjct: 335 WGENGYYRICRGRNICGVDAM 355



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 180/381 (47%), Gaps = 55/381 (14%)

Query: 234 LEKKAIMLIQAVFLLC-GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETF 292
           +E++ ++      LL   +AS      L D +  QVV   D   +      + E+   TF
Sbjct: 1   MERRCLISFLVYALLSFTIASTTSPDELDDPLIRQVVPDGDQDHL-----LNAEHHFTTF 55

Query: 293 KAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKT 344
           KA   K G+ YA  EE   RF+ FK +  +  KH+       +G + FSD +P E     
Sbjct: 56  KA---KFGKTYATQEEHDYRFKLFKANLRRARKHQMMDPTAVHGVTMFSDLTPREF---- 108

Query: 345 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 404
                 R Y  +   R   +     +     +P  +DWR         +Q +CGSCW+FS
Sbjct: 109 -----RRQYLGLRRLRLPADAHEAPILPTNDLPTDFDWRDHGAVTNVKNQGSCGSCWSFS 163

Query: 405 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-----GC-GGCDG--LEQPIEYTHQA-G 455
            AG LEG + + TG+LV  S+ QLV+C  +C       C  GC+G  +    EYT +A G
Sbjct: 164 AAGALEGAHFLATGELVSLSEQQLVDCDHECDPEEYGACDSGCNGGLMTTAFEYTLKAGG 223

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           LE E+DYPY  GN ++  C +D++K+        +     + +   L K+GPL+VG+N+ 
Sbjct: 224 LEREEDYPY-TGN-DRGPCKFDRNKIVASVSNFSVVSIDEDQIAANLVKHGPLAVGINAV 281

Query: 516 LIHFYNGTPIRKNDETCSPYDLG----HAVLLVGYG-------KQDDIPYWLARNSWGPI 564
            +  Y G           PY       H VLLVGYG       +  D P+W+ +NSWG  
Sbjct: 282 FMQTYMGG-------VSCPYICSKRQDHGVLLVGYGSAGYAPIRLKDKPFWIIKNSWGES 334

Query: 565 GPDEGFFKIERGNNACGIEQI 585
             + G+++I RG N CG++ +
Sbjct: 335 WGENGYYRICRGRNICGVDAM 355



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 119/230 (51%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         +Q  CGSCW+FS AG LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 135 LPTDFDWRDHGAVTNVKNQGSCGSCWSFSAAGALEGAHFLATGELVSLSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GLE E+DYPY     ++  C +D++K+     
Sbjct: 195 DPEEYGACDSGCNGGLMTTAFEYTLKAGGLEREEDYPY--TGNDRGPCKFDRNKIVASVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVL 176
              +     + +   L K+GPL+V +N+  +  Y G           PY       H VL
Sbjct: 253 NFSVVSIDEDQIAANLVKHGPLAVGINAVFMQTYMGG-------VSCPYICSKRQDHGVL 305

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +  + P+W+++NSWG    + G+++I RG N CG++ +
Sbjct: 306 LVGYGSAGYAPIRLKDKPFWIIKNSWGESWGENGYYRICRGRNICGVDAM 355



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  A GI  +     +  V     CS     H VLLVGYG       +  D P+W++
Sbjct: 269  VKHGPLAVGINAVFMQTYMGGVSCPYICSKRQ-DHGVLLVGYGSAGYAPIRLKDKPFWII 327

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    + G+++I RG N CG++ +
Sbjct: 328  KNSWGESWGENGYYRICRGRNICGVDAM 355


>gi|77628008|ref|NP_001029282.1| cathepsin F precursor [Rattus norvegicus]
 gi|71681040|gb|AAH99780.1| Cathepsin F [Rattus norvegicus]
 gi|149062007|gb|EDM12430.1| cathepsin F, isoform CRA_a [Rattus norvegicus]
 gi|159895422|gb|ABX09995.1| cathepsin F [Rattus norvegicus]
          Length = 462

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                     Y   +  +E   KM +    +   P  WDWRKK       DQ  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGGKMSLAKSINDLAPPEWDWRKKGAVTEVKDQGMCGSCWA 275

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEK 825
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  YT   +  GLE+E 
Sbjct: 276 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKMDKACMGGL--PSNAYTAIKNLGGLETED 333

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DY Y+   G    C +     K++             +   L + GP+SV +N+  +  Y
Sbjct: 334 DYGYQ---GHVQACNFSTQMAKVYINDSVELSRDENKIAAWLAQKGPISVAINAFGMQFY 390

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                      CSP+ + HAVLLVGYG + NIPYW ++NSWG    +EG++ + RG+ AC
Sbjct: 391 RHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGRDWGEEGYYYLYRGSGAC 450

Query: 946 GIEQIAGYATID 957
           G+  +A  A ++
Sbjct: 451 GVNTMASSAVVN 462



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 146/310 (47%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                     Y   +  +E   KM +    +   P  WDWRKK       DQ  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGGKMSLAKSINDLAPPEWDWRKKGAVTEVKDQGMCGSCWA 275

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+E DY
Sbjct: 276 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKMDKACMGGLPSNAYTAIKNLGGLETEDDY 335

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
            Y+   G    C +     K++             +   L + GP+SV +N+  + FY  
Sbjct: 336 GYQ---GHVQACNFSTQMAKVYINDSVELSRDENKIAAWLAQKGPISVAINAFGMQFYRH 392

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
                    CSP+ + HAVLLVGYG + +IPYW  +NSWG    +EG++ + RG+ ACG+
Sbjct: 393 GIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGRDWGEEGYYYLYRGSGACGV 452

Query: 583 EQIAGYATID 592
             +A  A ++
Sbjct: 453 NTMASSAVVN 462



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/219 (36%), Positives = 115/219 (52%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWRKK       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 249 APPEWDWRKKGAVTEVKDQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKMD 308

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  YT   +  GLE+E DY Y+   G    C +     K++         
Sbjct: 309 KACMGGL--PSNAYTAIKNLGGLETEDDYGYQ---GHVQACNFSTQMAKVYINDSVELSR 363

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIP
Sbjct: 364 DENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIP 423

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 424 YWAIKNSWGRDWGEEGYYYLYRGSGACGVNTMASSAVVN 462



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + +IPYW ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 402  CSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGRDWGEEGYYYLYRGSGACGVNTMASSAVV 461

Query: 1025 D 1025
            +
Sbjct: 462  N 462


>gi|74229746|ref|YP_308950.1| cathepsin [Trichoplusia ni SNPV]
 gi|72259660|gb|AAZ67431.1| cathepsin [Trichoplusia ni SNPV]
          Length = 344

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 163/324 (50%), Gaps = 30/324 (9%)

Query: 647 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEF 698
           L ++ E   + F+ F  K  + YA+D E   R++ FK        ++       Y  ++F
Sbjct: 36  LQYNLERAPQYFETFQTKYKKVYADDNERDYRYKIFKTNLEIINLKNQQNDSAVYNINKF 95

Query: 699 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTG 755
           +D +  E++ K         +  +      ++     +  DGP     + +DWR+ N   
Sbjct: 96  ADLTKNEVIAK---------FTGLGVKSPNLKNFCDPLIVDGPSKYTQETFDWRQFNKIT 146

Query: 756 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE- 814
              DQ  CGSCWAFS    LE QYAIK  + ++ S+ QLV+C     GC G     + E 
Sbjct: 147 SVKDQGFCGSCWAFSTIAGLESQYAIKYNEHIDLSEQQLVDCDTIDMGCAGGLLHTAYEE 206

Query: 815 YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPL 873
                G+E E+DYPY++  G    C  +  K ++     + +   SE  +K +L++ GP+
Sbjct: 207 IMSMGGVEYEEDYPYRSVQG---PCRIENDKFQVSVDNCYRYILYSEDKLKDVLHEMGPI 263

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           +V +++  + DY G  I     +C  Y L HAVLLVGYG ++ IP+W+++NSWG    + 
Sbjct: 264 AVAVDAVDLTDYYGGIIT----SCKNYGLNHAVLLVGYGTENGIPFWVLKNSWGTDYGEN 319

Query: 934 GFFKIERGNNACG-IEQIAGYATI 956
           GF +++R  N+CG I ++A  A I
Sbjct: 320 GFVRVKRNVNSCGMINELAASARI 343



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 162/326 (49%), Gaps = 33/326 (10%)

Query: 281 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEF 332
           L ++ E   + F+ F  K  + YA+D E   R++ FK        ++       Y  ++F
Sbjct: 36  LQYNLERAPQYFETFQTKYKKVYADDNERDYRYKIFKTNLEIINLKNQQNDSAVYNINKF 95

Query: 333 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTG 389
           +D +  E++ K         +  +      ++     +  DGP     + +DWR+ N   
Sbjct: 96  ADLTKNEVIAK---------FTGLGVKSPNLKNFCDPLIVDGPSKYTQETFDWRQFNKIT 146

Query: 390 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI- 448
              DQ  CGSCWAFS    LE QYAIK  + ++ S+ QLV+C     GC G  GL     
Sbjct: 147 SVKDQGFCGSCWAFSTIAGLESQYAIKYNEHIDLSEQQLVDCDTIDMGCAG--GLLHTAY 204

Query: 449 -EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYG 506
            E     G+E E+DYPYR+  G    C  +  K ++     + Y   SE  +K +L++ G
Sbjct: 205 EEIMSMGGVEYEEDYPYRSVQG---PCRIENDKFQVSVDNCYRYILYSEDKLKDVLHEMG 261

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P++V +++  +  Y G  I     +C  Y L HAVLLVGYG ++ IP+W+ +NSWG    
Sbjct: 262 PIAVAVDAVDLTDYYGGIIT----SCKNYGLNHAVLLVGYGTENGIPFWVLKNSWGTDYG 317

Query: 567 DEGFFKIERGNNACG-IEQIAGYATI 591
           + GF +++R  N+CG I ++A  A I
Sbjct: 318 ENGFVRVKRNVNSCGMINELAASARI 343



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 125/224 (55%), Gaps = 13/224 (5%)

Query: 8   DGP---VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           DGP     + +DWR+ N      DQ  CGSCWAFS    LE QYAIK  + ++ S+ QLV
Sbjct: 127 DGPSKYTQETFDWRQFNKITSVKDQGFCGSCWAFSTIAGLESQYAIKYNEHIDLSEQQLV 186

Query: 65  ECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C     GC G     + E      G+E E+DYPY++  G    C  +  K ++     +
Sbjct: 187 DCDTIDMGCAGGLLHTAYEEIMSMGGVEYEEDYPYRSVQG---PCRIENDKFQVSVDNCY 243

Query: 124 LHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            +   SE  +K +L++ GP++V +++  + DY G  I     +C  Y L HAVLLVGYG 
Sbjct: 244 RYILYSEDKLKDVLHEMGPIAVAVDAVDLTDYYGGIIT----SCKNYGLNHAVLLVGYGT 299

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
           ++ IP+W+++NSWG    + GF +++R  N+CG I ++A  A I
Sbjct: 300 ENGIPFWVLKNSWGTDYGENGFVRVKRNVNSCGMINELAASARI 343



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYA 1022
            +C  Y L HAVLLVGYG ++ IP+W+++NSWG    + GF +++R  N+CG I ++A  A
Sbjct: 282  SCKNYGLNHAVLLVGYGTENGIPFWVLKNSWGTDYGENGFVRVKRNVNSCGMINELAASA 341

Query: 1023 TI 1024
             I
Sbjct: 342  RI 343


>gi|7211741|gb|AAF40414.1|AF216783_1 papain-like cysteine proteinase isoform I [Ipomoea batatas]
          Length = 368

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 161/340 (47%), Gaps = 47/340 (13%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 704
           N    F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD +P 
Sbjct: 46  NADHHFTVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDLTPT 105

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E   +  F    R   +  AD  K   +L   E    +P  +DWR      P  +Q  CG
Sbjct: 106 EF--RRKFLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQGTCG 157

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCW+FS  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G     + EY
Sbjct: 158 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEY 217

Query: 816 THQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
           T +A GL  E+DYPY   + +   C +DK+K+        +     + +   L K GPL+
Sbjct: 218 TLKAGGLMREEDYPYTGNDLQ--VCRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLA 275

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVR 923
           V +N+  +  Y G           PY     L H VLLVGYG       +    PYW+++
Sbjct: 276 VAINAVFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIK 328

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVVKND 962
           NSWG    + G++KI RG N CG++  ++  A +    +D
Sbjct: 329 NSWGESWGENGYYKICRGRNVCGVDSMVSTVAAVSTTTSD 368



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 157/327 (48%), Gaps = 45/327 (13%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 338
           N    F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD +P 
Sbjct: 46  NADHHFTVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDLTPT 105

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E   +  F    R   +  AD  K   +L   E    +P  +DWR      P  +Q  CG
Sbjct: 106 EF--RRKFLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQGTCG 157

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEY 450
           SCW+FS  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G  +    EY
Sbjct: 158 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEY 217

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
           T +A GL  E+DYPY  GN  +  C +DK+K+        +     + +   L K GPL+
Sbjct: 218 TLKAGGLMREEDYPY-TGNDLQV-CRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLA 275

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLAR 558
           V +N+  +  Y G           PY     L H VLLVGYG       +  + PYW+ +
Sbjct: 276 VAINAVFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIK 328

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQI 585
           NSWG    + G++KI RG N CG++ +
Sbjct: 329 NSWGESWGENGYYKICRGRNVCGVDSM 355



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 116/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR      P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 135 LPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY   + +   C +DK+K+     
Sbjct: 195 DPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQ--VCRFDKTKIAAKVA 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 253 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVL 305

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 306 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 355



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  A  I  +     I  V     CS   L H VLLVGYG       +  + PYW++
Sbjct: 269  VKNGPLAVAINAVFMQTYIGGVSCPYICSKR-LDHGVLLVGYGSAGYAPIRMKEKPYWII 327

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    + G++KI RG N CG++ +
Sbjct: 328  KNSWGESWGENGYYKICRGRNVCGVDSM 355


>gi|345783063|ref|XP_533219.3| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Canis lupus
           familiaris]
          Length = 490

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 166/353 (47%), Gaps = 23/353 (6%)

Query: 250 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEE 308
            + S L  P   DR  ++ ++ V  L  +  L  D +  +   FK F+    R Y   EE
Sbjct: 151 ALISSLFQPYSDDR--NETLSSVLPLLNKDPLPQDFSVKMASVFKEFVTTYNRTYETKEE 208

Query: 309 IKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVAD 359
            + R   F  +  +  +         +YG ++FSD + EE   +T +         +  +
Sbjct: 209 AEWRMSVFSNNMVRAQKIQALDRGTAQYGITKFSDLTEEEF--RTIY-----LNPLLREN 261

Query: 360 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 419
           R K  ++   +    P P+ WDWR K       DQ  CGSCWAFS+ G +EGQ+ +K G 
Sbjct: 262 RGKKMRLAKSISDHAPPPE-WDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLKEGT 320

Query: 420 LVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS 479
           L+  S+ +L++C K    C G              GLE+E DY Y+   G    C++   
Sbjct: 321 LLSLSEQELLDCDKVDKACLGGLPSNAYSAIMTLGGLETEDDYSYQ---GHLQACSFSAK 377

Query: 480 KVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGH 539
           K +++           + +   L K GP+SV +N+  + FY           CSP+ + H
Sbjct: 378 KARVYINDSMELSQNEQKLAAWLAKKGPISVAINAFGMQFYRHGISHPLRPLCSPWLIDH 437

Query: 540 AVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           AVLLVGYG +  IP+W  +NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 438 AVLLVGYGNRSGIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVVN 490



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 170/355 (47%), Gaps = 28/355 (7%)

Query: 616 GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEE 674
            + S L  P   DR  ++ ++ V  L  +  L  D +  +   FK F+    R Y   EE
Sbjct: 151 ALISSLFQPYSDDR--NETLSSVLPLLNKDPLPQDFSVKMASVFKEFVTTYNRTYETKEE 208

Query: 675 IKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVAD 725
            + R   F  +  +  +         +YG ++FSD + EE   +T +         +  +
Sbjct: 209 AEWRMSVFSNNMVRAQKIQALDRGTAQYGITKFSDLTEEEF--RTIY-----LNPLLREN 261

Query: 726 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK 785
           R K  ++   +    P P+ WDWR K       DQ  CGSCWAFS+ G +EGQ+ +K G 
Sbjct: 262 RGKKMRLAKSISDHAPPPE-WDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLKEGT 320

Query: 786 LVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYD 842
           L+  S+ +L++C K    C G    PS  Y+      GLE+E DY Y+   G    C++ 
Sbjct: 321 LLSLSEQELLDCDKVDKACLGGL--PSNAYSAIMTLGGLETEDDYSYQ---GHLQACSFS 375

Query: 843 KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDL 902
             K +++           + +   L K GP+SV +N+  +  Y           CSP+ +
Sbjct: 376 AKKARVYINDSMELSQNEQKLAAWLAKKGPISVAINAFGMQFYRHGISHPLRPLCSPWLI 435

Query: 903 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
            HAVLLVGYG +  IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 436 DHAVLLVGYGNRSGIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVVN 490



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 117/222 (52%), Gaps = 8/222 (3%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D   P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C 
Sbjct: 274 DHAPPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLKEGTLLSLSEQELLDCD 333

Query: 68  KQCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           K    C G    PS  Y+      GLE+E DY Y+   G    C++   K +++      
Sbjct: 334 KVDKACLGGL--PSNAYSAIMTLGGLETEDDYSYQ---GHLQACSFSAKKARVYINDSME 388

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
                + +   L K GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + 
Sbjct: 389 LSQNEQKLAAWLAKKGPISVAINAFGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRS 448

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 449 GIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVVN 490



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +  IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 430  CSPWLIDHAVLLVGYGNRSGIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVV 489

Query: 1025 D 1025
            +
Sbjct: 490  N 490


>gi|194352746|emb|CAQ00101.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 381

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 178/366 (48%), Gaps = 51/366 (13%)

Query: 623 LPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYF 682
           L S T+ + D ++ +V     E  L  + E     F +F+ + G+ Y + +E + R   F
Sbjct: 26  LSSATEGLEDPLIEQVVGGDAENELELNAE---AHFASFVRRFGKSYRDADEHEHRLSVF 82

Query: 683 KQDGHK--KHER------YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKML 733
           + +  +  +H+R      +G ++FSD +P+E   +  G + S R++ + ++        L
Sbjct: 83  RANLRRARRHQRLDPSAVHGITKFSDLTPDEFRERFLGLRKSRRSFLKGISGSAHDAPAL 142

Query: 734 MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 793
                DG +P  +DWR+    GP  DQ +CGSCW+FS +G LEG   + TGKL   S+ Q
Sbjct: 143 ---PTDG-LPTEFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGANYLATGKLEVLSEQQ 198

Query: 794 LVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDK 843
           LV+C  +C         +GC+G     +  Y  +A GLE+EKDYPY    G    C +DK
Sbjct: 199 LVDCDHECDPSEPRACDAGCNGGLMTTAFSYLAKAGGLETEKDYPY---TGRNSACKFDK 255

Query: 844 SKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDL 902
           SK+     K+F      E  +   L K+GPL++ +N+  +  Y G           PY  
Sbjct: 256 SKIAAQV-KNFSTVAIDEDQIAANLVKHGPLAIGINAVFMQTYIGG-------VSCPYIC 307

Query: 903 GH---AVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQ 949
           G     V LVGYG            PYW+++NSWG    + G++KI RG    N CG++ 
Sbjct: 308 GRHLDHVFLVGYGSAGYAPLRFKEKPYWIIKNSWGENWGESGYYKICRGPHVKNKCGVDS 367

Query: 950 IAGYAT 955
           +    T
Sbjct: 368 MVSTVT 373



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 176/365 (48%), Gaps = 48/365 (13%)

Query: 257 LPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYF 316
           L S T+ + D ++ +V     E  L  + E     F +F+ + G+ Y + +E + R   F
Sbjct: 26  LSSATEGLEDPLIEQVVGGDAENELELNAE---AHFASFVRRFGKSYRDADEHEHRLSVF 82

Query: 317 KQDGHK--KHER------YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKML 367
           + +  +  +H+R      +G ++FSD +P+E   +  G + S R++ + ++        L
Sbjct: 83  RANLRRARRHQRLDPSAVHGITKFSDLTPDEFRERFLGLRKSRRSFLKGISGSAHDAPAL 142

Query: 368 MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 427
                DG +P  +DWR+    GP  DQ +CGSCW+FS +G LEG   + TGKL   S+ Q
Sbjct: 143 ---PTDG-LPTEFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGANYLATGKLEVLSEQQ 198

Query: 428 LVECAKQCS-----GC-GGCDGLEQPIEYTHQA---GLESEKDYPYRNGNGEKFKCAYDK 478
           LV+C  +C       C  GC+G      +++ A   GLE+EKDYPY    G    C +DK
Sbjct: 199 LVDCDHECDPSEPRACDAGCNGGLMTTAFSYLAKAGGLETEKDYPY---TGRNSACKFDK 255

Query: 479 SKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLG 538
           SK+              + +   L K+GPL++G+N+  +  Y G           PY  G
Sbjct: 256 SKIAAQVKNFSTVAIDEDQIAANLVKHGPLAIGINAVFMQTYIGG-------VSCPYICG 308

Query: 539 H---AVLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERG---NNACGIEQI 585
                V LVGYG          + PYW+ +NSWG    + G++KI RG    N CG++ +
Sbjct: 309 RHLDHVFLVGYGSAGYAPLRFKEKPYWIIKNSWGENWGESGYYKICRGPHVKNKCGVDSM 368

Query: 586 AGYAT 590
               T
Sbjct: 369 VSTVT 373



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 118/238 (49%), Gaps = 35/238 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+    GP  DQ  CGSCW+FS +G LEG   + TGKL   S+ QLV+C  +C
Sbjct: 147 LPTEFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGANYLATGKLEVLSEQQLVDCDHEC 206

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC+G     +  Y  +A GLE+EKDYPY    G    C +DKSK+     
Sbjct: 207 DPSEPRACDAGCNGGLMTTAFSYLAKAGGLETEKDYPY---TGRNSACKFDKSKIAAQV- 262

Query: 121 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH---AVL 176
           K+F      E  +   L K+GPL++ +N+  +  Y G           PY  G     V 
Sbjct: 263 KNFSTVAIDEDQIAANLVKHGPLAIGINAVFMQTYIGG-------VSCPYICGRHLDHVF 315

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 224
           LVGYG            PYW+++NSWG    + G++KI RG    N CG++ +    T
Sbjct: 316 LVGYGSAGYAPLRFKEKPYWIIKNSWGENWGESGYYKICRGPHVKNKCGVDSMVSTVT 373



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 12/96 (12%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLV 990
            ++ G  A GI  +     I  V     C  + L H V LVGYG          + PYW++
Sbjct: 280  VKHGPLAIGINAVFMQTYIGGVSCPYICGRH-LDH-VFLVGYGSAGYAPLRFKEKPYWII 337

Query: 991  RNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 1023
            +NSWG    + G++KI RG    N CG++ +    T
Sbjct: 338  KNSWGENWGESGYYKICRGPHVKNKCGVDSMVSTVT 373


>gi|27413319|gb|AAO11786.1| pre-pro cysteine proteinase [Vicia faba]
          Length = 363

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 173/381 (45%), Gaps = 70/381 (18%)

Query: 607 LIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNE-----NILETFKAF 661
            I A+ L   VA+     S  D  TD  + R            DNE     N    F +F
Sbjct: 5   FIFAIVLFAAVAT----SSTDDTNTDDFIIR---------QVVDNEEDHLLNAEHHFTSF 51

Query: 662 IVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCKTGFK 713
             K  + Y+  EE   RF  FK +    K H++      +G ++FSD +  E        
Sbjct: 52  KSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASE-------- 103

Query: 714 WSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAGDQAACGSCW 767
                + R     +K  ++    +K  P+      P+ +DWR+K    P  DQ +CGSCW
Sbjct: 104 -----FRRQFLGLKKRLRLPAHAQK-APILPTTNLPEDFDWREKGAVTPVKDQGSCGSCW 157

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQ 818
           AFS  G LEG + + TGKLV  S+ QLV+C   C         SGC+G     + EY  Q
Sbjct: 158 AFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLQ 217

Query: 819 A-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
           + G+  EKDY Y   +G    C +DKSKV        +     E +   L K GPL+V +
Sbjct: 218 SGGVVQEKDYAYTGRDGS---CKFDKSKVVASVSNFSVVSLDEEQIAANLVKNGPLAVGI 274

Query: 878 NSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYGK-------QDNIPYWLVRNSWGPI 929
           N+  +  Y +G         C+   L H VLLVG+GK           PYW+V+NSWG  
Sbjct: 275 NAAWMQTYMSGVSC---PYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIVKNSWGQN 331

Query: 930 GPDEGFFKIERGNNACGIEQI 950
             ++G++KI RG N CG++ +
Sbjct: 332 WGEQGYYKICRGRNVCGVDSM 352



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 174/381 (45%), Gaps = 69/381 (18%)

Query: 241 LIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNE-----NILETFKAF 295
            I A+ L   VA+     S  D  TD  + R            DNE     N    F +F
Sbjct: 5   FIFAIVLFAAVAT----SSTDDTNTDDFIIR---------QVVDNEEDHLLNAEHHFTSF 51

Query: 296 IVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCKTGFK 347
             K  + Y+  EE   RF  FK +    K H++      +G ++FSD +  E        
Sbjct: 52  KSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASE-------- 103

Query: 348 WSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAGDQAACGSCW 401
                + R     +K  ++    +K  P+      P+ +DWR+K    P  DQ +CGSCW
Sbjct: 104 -----FRRQFLGLKKRLRLPAHAQK-APILPTTNLPEDFDWREKGAVTPVKDQGSCGSCW 157

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQ 453
           AFS  G LEG + + TGKLV  S+ QLV+C   C      S   GC+G  +    EY  Q
Sbjct: 158 AFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLQ 217

Query: 454 A-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
           + G+  EKDY Y   +G    C +DKSKV        +     E +   L K GPL+VG+
Sbjct: 218 SGGVVQEKDYAYTGRDGS---CKFDKSKVVASVSNFSVVSLDEEQIAANLVKNGPLAVGI 274

Query: 513 NSHLIHFY-NGTPIRKNDETCSPYDLGHAVLLVGYGK-------QDDIPYWLARNSWGPI 564
           N+  +  Y +G         C+   L H VLLVG+GK         + PYW+ +NSWG  
Sbjct: 275 NAAWMQTYMSGVSC---PYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIVKNSWGQN 331

Query: 565 GPDEGFFKIERGNNACGIEQI 585
             ++G++KI RG N CG++ +
Sbjct: 332 WGEQGYYKICRGRNVCGVDSM 352



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 119/227 (52%), Gaps = 24/227 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K    P  DQ  CGSCWAFS  G LEG + + TGKLV  S+ QLV+C   C
Sbjct: 132 LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVC 191

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  Q+ G+  EKDY Y   +G    C +DKSKV     
Sbjct: 192 DPEQAGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRDGS---CKFDKSKVVASVS 248

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVG 179
              +     E +   L K GPL+V +N+  +  Y +G         C+   L H VLLVG
Sbjct: 249 NFSVVSLDEEQIAANLVKNGPLAVGINAAWMQTYMSGVSC---PYVCAKSRLDHGVLLVG 305

Query: 180 YGK-------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           +GK           PYW+V+NSWG    ++G++KI RG N CG++ +
Sbjct: 306 FGKGAYAPIRLKEKPYWIVKNSWGQNWGEQGYYKICRGRNVCGVDSM 352



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGK-------QDDIPYWLV 990
            ++ G  A GI        +  V     C+   L H VLLVG+GK         + PYW+V
Sbjct: 265  VKNGPLAVGINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIV 324

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    ++G++KI RG N CG++ +
Sbjct: 325  KNSWGQNWGEQGYYKICRGRNVCGVDSM 352


>gi|146215998|gb|ABQ10201.1| cysteine protease Cp3 [Actinidia deliciosa]
          Length = 365

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 160/334 (47%), Gaps = 48/334 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           F+ F  + G+ YA  E+   RF  FK +  +   H+R      +G ++FSD +P E    
Sbjct: 50  FRLFKRRFGKSYATQEDHDYRFSVFKTNLRRARHHQRLDPSAVHGVTQFSDLTPAE---- 105

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+ +    +R+    +  +  ++  E    +P  +DWR         +Q +CGSCW+F
Sbjct: 106 --FRRNHLGLKRLRFPADANKAPILPTED---LPADFDWRDHGAVASVKNQGSCGSCWSF 160

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G     ++EYT +A 
Sbjct: 161 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSALEYTLKAG 220

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY     ++  C +D++K+        +       +   L K GPL+V +N+
Sbjct: 221 GLMREEDYPYSGT--DRGTCKFDETKIAASVANFSVVSLDENQIAANLVKNGPLAVAINA 278

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +    PYW+++NSWG 
Sbjct: 279 VFMQTYVGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGE 331

Query: 929 IGPDEGFFKIERGNNACGIEQ-IAGYATIDVVKN 961
              + GF+KI +G N CG++  ++  A +    N
Sbjct: 332 SWGENGFYKICQGRNVCGVDSMVSTVAAVHTTSN 365



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 156/322 (48%), Gaps = 46/322 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           F+ F  + G+ YA  E+   RF  FK +  +   H+R      +G ++FSD +P E    
Sbjct: 50  FRLFKRRFGKSYATQEDHDYRFSVFKTNLRRARHHQRLDPSAVHGVTQFSDLTPAE---- 105

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+ +    +R+    +  +  ++  E    +P  +DWR         +Q +CGSCW+F
Sbjct: 106 --FRRNHLGLKRLRFPADANKAPILPTED---LPADFDWRDHGAVASVKNQGSCGSCWSF 160

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G  +   +EYT +A 
Sbjct: 161 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSALEYTLKAG 220

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY     ++  C +D++K+        +       +   L K GPL+V +N+
Sbjct: 221 GLMREEDYPY--SGTDRGTCKFDETKIAASVANFSVVSLDENQIAANLVKNGPLAVAINA 278

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  + PYW+ +NSWG 
Sbjct: 279 VFMQTYVGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGE 331

Query: 564 IGPDEGFFKIERGNNACGIEQI 585
              + GF+KI +G N CG++ +
Sbjct: 332 SWGENGFYKICQGRNVCGVDSM 353



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 115/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 133 LPADFDWRDHGAVASVKNQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 192

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     ++EYT +A GL  E+DYPY     ++  C +D++K+     
Sbjct: 193 DPEEPGSCDSGCNGGLMNSALEYTLKAGGLMREEDYPYSGT--DRGTCKFDETKIAASVA 250

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +       +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NFSVVSLDENQIAANLVKNGPLAVAINAVFMQTYVGG-------VSCPYICSKRLDHGVL 303

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + GF+KI +G N CG++ +
Sbjct: 304 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGFYKICQGRNVCGVDSM 353



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    + GF+KI +G N CG++ +
Sbjct: 298  LDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGFYKICQGRNVCGVDSM 353


>gi|351710879|gb|EHB13798.1| Cathepsin F [Heterocephalus glaber]
          Length = 482

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 147/314 (46%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           ++  FK F+    R Y + +E + R   F ++               +YG ++FSD + E
Sbjct: 181 MISIFKNFVATYNRTYESKKEAQWRLSVFTRNMVLAQRIQALDHGTAQYGVTKFSDLTEE 240

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +   E  +KM +      P P  WDWRKK       +Q  CG
Sbjct: 241 EF---------RTIYLNPLLREEPGKKMHLAKAVRDPAPLEWDWRKKGAVTEVKNQGMCG 291

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G       +      GLE+
Sbjct: 292 SCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKMDKACMGGFPSNAYLAIKSLGGLET 351

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY Y+   G    C +   K K++           + +   L   GP+SV +N+  + 
Sbjct: 352 EDDYSYQ---GHMKACNFSAKKAKVYINDSVELSKNEQKLAAWLAVKGPISVAINAFGMQ 408

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY           CSP+ + HA+L+VGYG + ++P+W  +NSWG    +EG++ + RG+ 
Sbjct: 409 FYRHGIAHPLRPLCSPWFIDHAMLVVGYGNRSNVPFWAIKNSWGTDWGEEGYYYLHRGSG 468

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A +D
Sbjct: 469 ACGVNIMASSAVVD 482



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 150/316 (47%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           ++  FK F+    R Y + +E + R   F ++               +YG ++FSD + E
Sbjct: 181 MISIFKNFVATYNRTYESKKEAQWRLSVFTRNMVLAQRIQALDHGTAQYGVTKFSDLTEE 240

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +   E  +KM +      P P  WDWRKK       +Q  CG
Sbjct: 241 EF---------RTIYLNPLLREEPGKKMHLAKAVRDPAPLEWDWRKKGAVTEVKNQGMCG 291

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G F  PS  Y       GL
Sbjct: 292 SCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKMDKACMGGF--PSNAYLAIKSLGGL 349

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y+   G    C +   K K++           + +   L   GP+SV +N+  
Sbjct: 350 ETEDDYSYQ---GHMKACNFSAKKAKVYINDSVELSKNEQKLAAWLAVKGPISVAINAFG 406

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y           CSP+ + HA+L+VGYG + N+P+W ++NSWG    +EG++ + RG
Sbjct: 407 MQFYRHGIAHPLRPLCSPWFIDHAMLVVGYGNRSNVPFWAIKNSWGTDWGEEGYYYLHRG 466

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A +D
Sbjct: 467 SGACGVNIMASSAVVD 482



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 116/220 (52%), Gaps = 8/220 (3%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P P  WDWRKK       +Q  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K 
Sbjct: 268 PAPLEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKM 327

Query: 70  CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
              C G F  PS  Y       GLE+E DY Y+   G    C +   K K++        
Sbjct: 328 DKACMGGF--PSNAYLAIKSLGGLETEDDYSYQ---GHMKACNFSAKKAKVYINDSVELS 382

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
              + +   L   GP+SV +N+  +  Y           CSP+ + HA+L+VGYG + N+
Sbjct: 383 KNEQKLAAWLAVKGPISVAINAFGMQFYRHGIAHPLRPLCSPWFIDHAMLVVGYGNRSNV 442

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +D
Sbjct: 443 PFWAIKNSWGTDWGEEGYYYLHRGSGACGVNIMASSAVVD 482



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HA+L+VGYG + ++P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 422  CSPWFIDHAMLVVGYGNRSNVPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNIMASSAVV 481

Query: 1025 D 1025
            D
Sbjct: 482  D 482


>gi|118481169|gb|ABK92536.1| unknown [Populus trichocarpa]
          Length = 368

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 163/334 (48%), Gaps = 49/334 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           F  F  K  + Y + EE   RF  FK +  +  +H++      +G ++FSD +  E    
Sbjct: 53  FSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAE---- 108

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+       ++   ++     ++       +P+ +DWR+K   GP  +Q +CGSCW+F
Sbjct: 109 --FRKQVLGLRKLRLPKDANTAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSF 163

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG + + TG+LV  S+ QLV+C  +C         SGC+G     + EYT +A 
Sbjct: 164 STTGALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 223

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY     ++  C +DK+KV        +     + +   L K GPL+V +N+
Sbjct: 224 GLMREEDYPYTGM--DRGACKFDKNKVAAGVANFSVVSLDEDQIAANLVKNGPLAVAINA 281

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +    PYW+++NSWG 
Sbjct: 282 VFMQTYIGG-------VSCPYICSRRLDHGVLLVGYGSAAYAPVRMKEKPYWIIKNSWGE 334

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATIDVVKND 962
              + GF+KI RG N CG++ +   +T+  V+ +
Sbjct: 335 SWGENGFYKICRGRNICGVDSMV--STVAAVQTN 366



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 157/322 (48%), Gaps = 46/322 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           F  F  K  + Y + EE   RF  FK +  +  +H++      +G ++FSD +  E    
Sbjct: 53  FSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAE---- 108

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+       ++   ++     ++       +P+ +DWR+K   GP  +Q +CGSCW+F
Sbjct: 109 --FRKQVLGLRKLRLPKDANTAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSF 163

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG + + TG+LV  S+ QLV+C  +C      S   GC+G  +    EYT +A 
Sbjct: 164 STTGALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 223

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY     ++  C +DK+KV        +     + +   L K GPL+V +N+
Sbjct: 224 GLMREEDYPYT--GMDRGACKFDKNKVAAGVANFSVVSLDEDQIAANLVKNGPLAVAINA 281

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  + PYW+ +NSWG 
Sbjct: 282 VFMQTYIGG-------VSCPYICSRRLDHGVLLVGYGSAAYAPVRMKEKPYWIIKNSWGE 334

Query: 564 IGPDEGFFKIERGNNACGIEQI 585
              + GF+KI RG N CG++ +
Sbjct: 335 SWGENGFYKICRGRNICGVDSM 356



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 121/230 (52%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K   GP  +Q  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 136 LPEDFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHEC 195

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY     ++  C +DK+KV     
Sbjct: 196 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGM--DRGACKFDKNKVAAGVA 253

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 254 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSRRLDHGVL 306

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 307 LVGYGSAAYAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSM 356



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 301  LDHGVLLVGYGSAAYAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSM 356


>gi|390339264|ref|XP_791714.3| PREDICTED: putative cysteine proteinase CG12163-like
           [Strongylocentrotus purpuratus]
          Length = 453

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 153/313 (48%), Gaps = 43/313 (13%)

Query: 290 ETFKAFIVKRGRQYANDEEIKE---RFEYFKQDG---------HKKHERYGTSEFSDRSP 337
           + F  F++   R+Y  ++   E   R+  F Q+           +   +YG ++F+D + 
Sbjct: 154 DLFDKFLMTFKREYRQNDGTNEYEYRYSVFVQNMLTVEMFNQFEQGTAKYGPTKFADMTE 213

Query: 338 EEI-------LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            E        L KTG K      +                   GPVP+ +DWR      P
Sbjct: 214 AEFRKLQSGPLKKTGIKKQAAIPQ-------------------GPVPEEYDWRTHGAVTP 254

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY 450
             +Q  CGSCWAFS  G +EGQ+ IK G+L+  S+ +LV+C K   GC G +  +     
Sbjct: 255 VKNQGMCGSCWAFSAIGNMEGQWQIKKGELISLSEQELVDCDKVDGGCEGGEMSDAYEAI 314

Query: 451 THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLS 509
               G  SE+ YPYR   GE  KC ++ + V++     ++  + +ET M   L  +GP+S
Sbjct: 315 IKLGGAMSEEKYPYR---GENEKCKFNMTDVRVKI-NGYVNISKNETEMAGWLAAHGPIS 370

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEG 569
           +G+N+ ++ FY G         CSP  L H VL+VGY  +D  PYW+ +NSWG    +EG
Sbjct: 371 IGINALMMQFYFGGIAHPWKIFCSPDSLDHGVLIVGYSVKDGEPYWIVKNSWGKDWGEEG 430

Query: 570 FFKIERGNNACGI 582
           ++ + RG+  CG+
Sbjct: 431 YYLVYRGDGTCGL 443



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 155/313 (49%), Gaps = 44/313 (14%)

Query: 656 ETFKAFIVKRGRQYANDEEIKE---RFEYFKQDG---------HKKHERYGTSEFSDRSP 703
           + F  F++   R+Y  ++   E   R+  F Q+           +   +YG ++F+D + 
Sbjct: 154 DLFDKFLMTFKREYRQNDGTNEYEYRYSVFVQNMLTVEMFNQFEQGTAKYGPTKFADMTE 213

Query: 704 EEI-------LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            E        L KTG K      +                   GPVP+ +DWR      P
Sbjct: 214 AEFRKLQSGPLKKTGIKKQAAIPQ-------------------GPVPEEYDWRTHGAVTP 254

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT 816
             +Q  CGSCWAFS  G +EGQ+ IK G+L+  S+ +LV+C K   GC+G     + E  
Sbjct: 255 VKNQGMCGSCWAFSAIGNMEGQWQIKKGELISLSEQELVDCDKVDGGCEGGEMSDAYEAI 314

Query: 817 HQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLS 874
            +  G  SE+ YPY+   GE  KC ++ + V++     +++ + +ET M   L  +GP+S
Sbjct: 315 IKLGGAMSEEKYPYR---GENEKCKFNMTDVRVKI-NGYVNISKNETEMAGWLAAHGPIS 370

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEG 934
           + +N+ ++  Y G         CSP  L H VL+VGY  +D  PYW+V+NSWG    +EG
Sbjct: 371 IGINALMMQFYFGGIAHPWKIFCSPDSLDHGVLIVGYSVKDGEPYWIVKNSWGKDWGEEG 430

Query: 935 FFKIERGNNACGI 947
           ++ + RG+  CG+
Sbjct: 431 YYLVYRGDGTCGL 443



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 122/210 (58%), Gaps = 6/210 (2%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           GPVP+ +DWR      P  +Q  CGSCWAFS  G +EGQ+ IK G+L+  S+ +LV+C K
Sbjct: 238 GPVPEEYDWRTHGAVTPVKNQGMCGSCWAFSAIGNMEGQWQIKKGELISLSEQELVDCDK 297

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              GC+G     + E   +  G  SE+ YPY+   GE  KC ++ + V++     +++ +
Sbjct: 298 VDGGCEGGEMSDAYEAIIKLGGAMSEEKYPYR---GENEKCKFNMTDVRVKI-NGYVNIS 353

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            +ET M   L  +GP+S+ +N+ ++  Y G         CSP  L H VL+VGY  +D  
Sbjct: 354 KNETEMAGWLAAHGPISIGINALMMQFYFGGIAHPWKIFCSPDSLDHGVLIVGYSVKDGE 413

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           PYW+V+NSWG    +EG++ + RG+  CG+
Sbjct: 414 PYWIVKNSWGKDWGEEGYYLVYRGDGTCGL 443



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CSP  L H VL+VGY  +D  PYW+V+NSWG    +EG++ + RG+  CG+
Sbjct: 393  CSPDSLDHGVLIVGYSVKDGEPYWIVKNSWGKDWGEEGYYLVYRGDGTCGL 443


>gi|229893789|gb|ACQ90252.1| cathepsin L [Pinctada fucata]
          Length = 362

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 157/323 (48%), Gaps = 32/323 (9%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER----------YGTSEFSDRSP 703
           ET+K F    G+ Y   EE  +RF+ F+    +  +H R           G ++FSD S 
Sbjct: 52  ETWKEFKTLFGKVYDTVEEEIKRFDIFRDTLERIEEHNRKYHMGQKSYYMGVNQFSDMSH 111

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           +E L   G +   R Y        K E      +    + D  DWR K    P  +Q  C
Sbjct: 112 DEYLRHNGLRRGNRKYS-------KGEGCDSYTKSGKQLDDKVDWRDKGYVTPVKNQGQC 164

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQ-AG 820
           GSCW+FS  G LEGQ+  +TGKL+  S+ QLV+C+      GC+G   + + EY     G
Sbjct: 165 GSCWSFSTTGSLEGQHFRQTGKLISLSEQQLVDCSGTFGNEGCNGGLMDNAFEYIKSIGG 224

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           LE E DYPY    G   KC   KS  K   TG   +     + +K  L   GP+SV +++
Sbjct: 225 LEGEDDYPYTAKQG---KCHLKKSLFKANDTGCTDVESGDEDALKDALASVGPISVAIDA 281

Query: 880 D--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFF 936
                  Y+G     ++E CS  +L H VL VGYG ++N   YWLV+NSWG +  +EG+ 
Sbjct: 282 SHASFQSYDGGVY--DEEECSSQNLDHGVLTVGYGTEENGGDYWLVKNSWGEMWGEEGYI 339

Query: 937 KIERG-NNACGIEQIAGYATIDV 958
           K+ R  +N CGI   A Y  + +
Sbjct: 340 KMSRNKDNQCGIATQASYPNVQL 362



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 156/322 (48%), Gaps = 29/322 (9%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER----------YGTSEFSDRSP 337
           ET+K F    G+ Y   EE  +RF+ F+    +  +H R           G ++FSD S 
Sbjct: 52  ETWKEFKTLFGKVYDTVEEEIKRFDIFRDTLERIEEHNRKYHMGQKSYYMGVNQFSDMSH 111

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           +E L   G +   R Y        K E      +    + D  DWR K    P  +Q  C
Sbjct: 112 DEYLRHNGLRRGNRKYS-------KGEGCDSYTKSGKQLDDKVDWRDKGYVTPVKNQGQC 164

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQ-A 454
           GSCW+FS  G LEGQ+  +TGKL+  S+ QLV+C+    G  GC+G  ++   EY     
Sbjct: 165 GSCWSFSTTGSLEGQHFRQTGKLISLSEQQLVDCSGTF-GNEGCNGGLMDNAFEYIKSIG 223

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLYFNGSETMKKILYKYGPLSVGLN 513
           GLE E DYPY    G   KC   KS  K   TG   +     + +K  L   GP+SV ++
Sbjct: 224 GLEGEDDYPYTAKQG---KCHLKKSLFKANDTGCTDVESGDEDALKDALASVGPISVAID 280

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEGFFK 572
           +    F +      ++E CS  +L H VL VGYG +++   YWL +NSWG +  +EG+ K
Sbjct: 281 ASHASFQSYDGGVYDEEECSSQNLDHGVLTVGYGTEENGGDYWLVKNSWGEMWGEEGYIK 340

Query: 573 IERG-NNACGIEQIAGYATIDV 593
           + R  +N CGI   A Y  + +
Sbjct: 341 MSRNKDNQCGIATQASYPNVQL 362



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 120/225 (53%), Gaps = 13/225 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           + D  DWR K    P  +Q  CGSCW+FS  G LEGQ+  +TGKL+  S+ QLV+C+   
Sbjct: 143 LDDKVDWRDKGYVTPVKNQGQCGSCWSFSTTGSLEGQHFRQTGKLISLSEQQLVDCSGTF 202

Query: 71  --SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHF 126
              GC+G   + + EY     GLE E DYPY    G   KC   KS  K   TG   +  
Sbjct: 203 GNEGCNGGLMDNAFEYIKSIGGLEGEDDYPYTAKQG---KCHLKKSLFKANDTGCTDVES 259

Query: 127 NGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
              + +K  L   GP+SV +++       Y+G     ++E CS  +L H VL VGYG ++
Sbjct: 260 GDEDALKDALASVGPISVAIDASHASFQSYDGGVY--DEEECSSQNLDHGVLTVGYGTEE 317

Query: 185 N-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDV 227
           N   YWLV+NSWG +  +EG+ K+ R  +N CGI   A Y  + +
Sbjct: 318 NGGDYWLVKNSWGEMWGEEGYIKMSRNKDNQCGIATQASYPNVQL 362



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 2/70 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIE 1016
            V ++E CS  +L H VL VGYG +++   YWLV+NSWG +  +EG+ K+ R  +N CGI 
Sbjct: 293  VYDEEECSSQNLDHGVLTVGYGTEENGGDYWLVKNSWGEMWGEEGYIKMSRNKDNQCGIA 352

Query: 1017 QIAGYATIDV 1026
              A Y  + +
Sbjct: 353  TQASYPNVQL 362


>gi|354494740|ref|XP_003509493.1| PREDICTED: cathepsin W-like [Cricetulus griseus]
 gi|344243260|gb|EGV99363.1| Cathepsin W [Cricetulus griseus]
          Length = 376

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 171/354 (48%), Gaps = 53/354 (14%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEFSDRSPEEILCK 709
           ++E FK F +K  R YAN  E   R   F     Q    + E  GT+EF +    ++   
Sbjct: 36  LIEVFKLFQIKYNRSYANPAEYARRLNIFAHNLAQAQRLQEEDLGTAEFGETPFSDL--- 92

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDG------PVPDAWDWRK-KNVTGPAGDQAA 762
                +E  + ++   ++  +++   V+K G      PVP   DWRK  N+     +Q  
Sbjct: 93  -----TEEEFGQLYGQQKAPKRIPNMVKKAGSEKWGQPVPSTCDWRKATNIISSIKNQKT 147

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGL 821
           C  CWA + A  +E  + IKT   VE S  +L++C +  +GCDG F ++  +   + +GL
Sbjct: 148 CRCCWAIAAADNIEALWRIKTQHFVEVSVQELLDCERCGNGCDGGFVWDAYMTVLNNSGL 207

Query: 822 ESEKDYPYK---NANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLL 877
            SEKDYP+K   N +G    C  ++ K K+   +DF      E  +   L  +GP++V +
Sbjct: 208 ASEKDYPFKGYPNPHG----CLANRYK-KVAWIQDFTMLGRDEQVIAGYLATHGPITVTI 262

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK----------------------QD 915
           N  L+  Y    I+    TC P  + H+VLLVG+GK                      + 
Sbjct: 263 NMKLLQGYQKGVIKATPTTCDPQQVDHSVLLVGFGKGKEKEDIQSGTILSQTRKPRKPRR 322

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID--VVKNDETCSP 967
           ++PYW+++NSWG    ++G+F++ RGNN+CGI +    A +D  V K    C P
Sbjct: 323 SVPYWILKNSWGAEWGEKGYFRLYRGNNSCGITKYPITACLDHPVKKPPIPCPP 376



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 163/344 (47%), Gaps = 44/344 (12%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEFSDRSPEEILCK 343
           ++E FK F +K  R YAN  E   R   F     Q    + E  GT+EF +    ++   
Sbjct: 36  LIEVFKLFQIKYNRSYANPAEYARRLNIFAHNLAQAQRLQEEDLGTAEFGETPFSDL--- 92

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDG------PVPDAWDWRK-KNVTGPAGDQAA 396
                +E  + ++   ++  +++   V+K G      PVP   DWRK  N+     +Q  
Sbjct: 93  -----TEEEFGQLYGQQKAPKRIPNMVKKAGSEKWGQPVPSTCDWRKATNIISSIKNQKT 147

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGL 456
           C  CWA + A  +E  + IKT   VE S  +L++C +  +GC G    +  +   + +GL
Sbjct: 148 CRCCWAIAAADNIEALWRIKTQHFVEVSVQELLDCERCGNGCDGGFVWDAYMTVLNNSGL 207

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSH 515
            SEKDYP++ G      C  ++ K K+   +DF      E  +   L  +GP++V +N  
Sbjct: 208 ASEKDYPFK-GYPNPHGCLANRYK-KVAWIQDFTMLGRDEQVIAGYLATHGPITVTINMK 265

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK----------------------QDDIP 553
           L+  Y    I+    TC P  + H+VLLVG+GK                      +  +P
Sbjct: 266 LLQGYQKGVIKATPTTCDPQQVDHSVLLVGFGKGKEKEDIQSGTILSQTRKPRKPRRSVP 325

Query: 554 YWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQR 597
           YW+ +NSWG    ++G+F++ RGNN+CGI +    A +D  +++
Sbjct: 326 YWILKNSWGAEWGEKGYFRLYRGNNSCGITKYPITACLDHPVKK 369



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 130/250 (52%), Gaps = 33/250 (13%)

Query: 10  PVPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           PVP   DWRK  N+     +Q  C  CWA + A  +E  + IKT   VE S  +L++C +
Sbjct: 125 PVPSTCDWRKATNIISSIKNQKTCRCCWAIAAADNIEALWRIKTQHFVEVSVQELLDCER 184

Query: 69  QCSGCDGCF-FEPSIEYTHQAGLESEKDYPYK---NANGEKFKCAYDKSKVKLFTGKDFL 124
             +GCDG F ++  +   + +GL SEKDYP+K   N +G    C  ++ K K+   +DF 
Sbjct: 185 CGNGCDGGFVWDAYMTVLNNSGLASEKDYPFKGYPNPHG----CLANRYK-KVAWIQDFT 239

Query: 125 HFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK- 182
                E  +   L  +GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK 
Sbjct: 240 MLGRDEQVIAGYLATHGPITVTINMKLLQGYQKGVIKATPTTCDPQQVDHSVLLVGFGKG 299

Query: 183 ---------------------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 221
                                + ++PYW+++NSWG    ++G+F++ RGNN+CGI +   
Sbjct: 300 KEKEDIQSGTILSQTRKPRKPRRSVPYWILKNSWGAEWGEKGYFRLYRGNNSCGITKYPI 359

Query: 222 YATIDVVIQR 231
            A +D  +++
Sbjct: 360 TACLDHPVKK 369



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 22/101 (21%)

Query: 947  IEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGK----------------------QDD 984
            ++ + GY    +     TC P  + H+VLLVG+GK                      +  
Sbjct: 264  MKLLQGYQKGVIKATPTTCDPQQVDHSVLLVGFGKGKEKEDIQSGTILSQTRKPRKPRRS 323

Query: 985  IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            +PYW+++NSWG    ++G+F++ RGNN+CGI +    A +D
Sbjct: 324  VPYWILKNSWGAEWGEKGYFRLYRGNNSCGITKYPITACLD 364


>gi|91992514|gb|ABE72973.1| cathepsin L [Aedes aegypti]
          Length = 265

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 144/274 (52%), Gaps = 18/274 (6%)

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           +YG + F+D +  E   +TG             DR  V     E++++  +P+++DWR+ 
Sbjct: 1   KYGITHFADMTSAEYRQRTGLVIPRDE------DRNHVGNPKAEIDENMELPESFDWREL 54

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDG 443
               P  +Q  CGSCWAFS+ G +EG + IKT  L E+S+ +L++C    S C G   D 
Sbjct: 55  GAVSPVKNQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQELLDCDAVDSACQGGYMDD 114

Query: 444 LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
             + IE     GLE E +YPY     ++  C ++ ++V +              M + L 
Sbjct: 115 AYKAIEKI--GGLELESEYPYL--AKKQKTCHFNSTEVHVRVKGAVDLPKNETAMAQYLV 170

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLA 557
             GP+S+GLN++ + FY G         CS  +L H VL+VGYG ++       +PYW+ 
Sbjct: 171 ANGPISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEYPMFNKTMPYWIV 230

Query: 558 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           +NSWGP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 231 KNSWGPKWGEQGYYRIFRGDNTCGVSEMASSAVL 264



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 150/273 (54%), Gaps = 17/273 (6%)

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           +YG + F+D +  E   +TG             DR  V     E++++  +P+++DWR+ 
Sbjct: 1   KYGITHFADMTSAEYRQRTGLVIPRDE------DRNHVGNPKAEIDENMELPESFDWREL 54

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  +Q  CGSCWAFS+ G +EG + IKT  L E+S+ +L++C    S C G + + 
Sbjct: 55  GAVSPVKNQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQELLDCDAVDSACQGGYMDD 114

Query: 812 SIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYK 869
           + +   +  GLE E +YPY  A  +K  C ++ ++V +   K  +    +ET M + L  
Sbjct: 115 AYKAIEKIGGLELESEYPYL-AKKQK-TCHFNSTEVHVRV-KGAVDLPKNETAMAQYLVA 171

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVR 923
            GP+S+ LN++ +  Y G         CS  +L H VL+VGYG ++       +PYW+V+
Sbjct: 172 NGPISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEYPMFNKTMPYWIVK 231

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           NSWGP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 232 NSWGPKWGEQGYYRIFRGDNTCGVSEMASSAVL 264



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 136/230 (59%), Gaps = 11/230 (4%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           E++++  +P+++DWR+     P  +Q +CGSCWAFS+ G +EG + IKT  L E+S+ +L
Sbjct: 38  EIDENMELPESFDWRELGAVSPVKNQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQEL 97

Query: 64  VECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           ++C    S C G + + + +   +  GLE E +YPY  A  +K  C ++ ++V +   K 
Sbjct: 98  LDCDAVDSACQGGYMDDAYKAIEKIGGLELESEYPYL-AKKQK-TCHFNSTEVHVRV-KG 154

Query: 123 FLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
            +    +ET M + L   GP+S+ LN++ +  Y G         CS  +L H VL+VGYG
Sbjct: 155 AVDLPKNETAMAQYLVANGPISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYG 214

Query: 182 KQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            ++       +PYW+V+NSWGP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 215 VKEYPMFNKTMPYWIVKNSWGPKWGEQGYYRIFRGDNTCGVSEMASSAVL 264


>gi|387015020|gb|AFJ49629.1| Cathepsin H [Crotalus adamanteus]
          Length = 337

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 155/314 (49%), Gaps = 31/314 (9%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEIL 707
           + FKA+  +  R Y ++EE + R + F  +  K  KH       R G ++FSD +  E  
Sbjct: 34  QLFKAWASQHRRAYRSEEEFRHRLQIFLDNKQKIDKHNAGNSSFRMGLNQFSDMTFTEF- 92

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSC 766
            +  + W E         +     M       GP P A DWRKK     P  +Q +CGSC
Sbjct: 93  -RKKYLWQE--------PQNCSATMGNFPRSAGPCPKAIDWRKKGKFVSPVKNQGSCGSC 143

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLES 823
           W FS  G LE   AIKTGKL+  ++ QL++CA+  +  GC G     + EY  +  GL  
Sbjct: 144 WTFSTTGCLESAIAIKTGKLLNLAEQQLIDCAQNFNNFGCSGGLPSQAFEYILYNKGLMD 203

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNS 879
           E+ YPY+  NG    C +   K   F  KD ++ +    + + + +  Y P+S+   +  
Sbjct: 204 EEAYPYRAQNG---TCKFQPQKAVAFI-KDVVNISLYDEQGLVQAVGTYNPVSIAFEVRE 259

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           D +H   G      D   +P  + HAVL VGYG++  +P+W+V+NSWG     +G+F IE
Sbjct: 260 DFVHYQEGV-YTSTDCDKTPDKVNHAVLAVGYGEEGGVPFWIVKNSWGTSWGLDGYFNIE 318

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A +
Sbjct: 319 RGKNMCGLADCASF 332



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 153/314 (48%), Gaps = 30/314 (9%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEIL 341
           + FKA+  +  R Y ++EE + R + F  +  K  KH       R G ++FSD +  E  
Sbjct: 34  QLFKAWASQHRRAYRSEEEFRHRLQIFLDNKQKIDKHNAGNSSFRMGLNQFSDMTFTEF- 92

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSC 400
            +  + W E         +     M       GP P A DWRKK     P  +Q +CGSC
Sbjct: 93  -RKKYLWQE--------PQNCSATMGNFPRSAGPCPKAIDWRKKGKFVSPVKNQGSCGSC 143

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLES 458
           W FS  G LE   AIKTGKL+  ++ QL++CA+  +  G   GL  Q  EY  +  GL  
Sbjct: 144 WTFSTTGCLESAIAIKTGKLLNLAEQQLIDCAQNFNNFGCSGGLPSQAFEYILYNKGLMD 203

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN--GSETMKKILYKYGPLSVG--LNS 514
           E+ YPYR  NG    C +   K   F  KD +  +    + + + +  Y P+S+   +  
Sbjct: 204 EEAYPYRAQNG---TCKFQPQKAVAFI-KDVVNISLYDEQGLVQAVGTYNPVSIAFEVRE 259

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
             +H+  G      D   +P  + HAVL VGYG++  +P+W+ +NSWG     +G+F IE
Sbjct: 260 DFVHYQEGV-YTSTDCDKTPDKVNHAVLAVGYGEEGGVPFWIVKNSWGTSWGLDGYFNIE 318

Query: 575 RGNNACGIEQIAGY 588
           RG N CG+   A +
Sbjct: 319 RGKNMCGLADCASF 332



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 13/222 (5%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P A DWRKK     P  +Q  CGSCW FS  G LE   AIKTGKL+  ++ QL++CA
Sbjct: 116 GPCPKAIDWRKKGKFVSPVKNQGSCGSCWTFSTTGCLESAIAIKTGKLLNLAEQQLIDCA 175

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  GL  E+ YPY+  NG    C +   K   F  KD +
Sbjct: 176 QNFNNFGCSGGLPSQAFEYILYNKGLMDEEAYPYRAQNG---TCKFQPQKAVAFI-KDVV 231

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
           + +    + + + +  Y P+S+   +  D +H   G      D   +P  + HAVL VGY
Sbjct: 232 NISLYDEQGLVQAVGTYNPVSIAFEVREDFVHYQEGV-YTSTDCDKTPDKVNHAVLAVGY 290

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           G++  +P+W+V+NSWG     +G+F IERG N CG+   A +
Sbjct: 291 GEEGGVPFWIVKNSWGTSWGLDGYFNIERGKNMCGLADCASF 332



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 38/56 (67%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG++  +P+W+V+NSWG     +G+F IERG N CG+   A +
Sbjct: 277  TPDKVNHAVLAVGYGEEGGVPFWIVKNSWGTSWGLDGYFNIERGKNMCGLADCASF 332


>gi|47522632|ref|NP_999094.1| pro-cathepsin H precursor [Sus scrofa]
 gi|5915886|sp|O46427.1|CATH_PIG RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|2735659|gb|AAB93957.1| preprocathepsin H [Sus scrofa]
 gi|172050733|gb|ACB70168.1| cathepsin H [Sus scrofa]
          Length = 335

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 160/316 (50%), Gaps = 40/316 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++V+  ++Y+  EE   R + F  +  K +         + G ++FSD S +EI  K
Sbjct: 35  FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHK 93

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 94  --YLWSEP--QNCSATKGNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSV---LLNSD 880
            YPYK   G+   C +   K   F  KD   +  N  E M + +  Y P+S    + N  
Sbjct: 204 TYPYK---GQDDHCKFQPDKAIAFV-KDVANITMNDEEAMVEAVALYNPVSFAFEVTNDF 259

Query: 881 LIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           L++    Y+ T   K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F 
Sbjct: 260 LMYRKGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 314

Query: 938 IERGNNACGIEQIAGY 953
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 158/316 (50%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++V+  ++Y+  EE   R + F  +  K +         + G ++FSD S +EI  K
Sbjct: 35  FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHK 93

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 94  --YLWSEP--QNCSATKGNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGL---NSH 515
            YPY+   G+   C +   K   F  KD   +  N  E M + +  Y P+S      N  
Sbjct: 204 TYPYK---GQDDHCKFQPDKAIAFV-KDVANITMNDEEAMVEAVALYNPVSFAFEVTNDF 259

Query: 516 LIH---FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           L++    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 LMYRKGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 120/226 (53%), Gaps = 21/226 (9%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPYK   G+   C +   K   F  KD  
Sbjct: 174 QNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-KDVA 229

Query: 124 -LHFNGSETMKKILYKYGPLSV---LLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVL 176
            +  N  E M + +  Y P+S    + N  L++    Y+ T   K     +P  + HAVL
Sbjct: 230 NITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNHAVL 284

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
            VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 285 AVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|326516056|dbj|BAJ88051.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 362

 Score =  157 bits (398), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 160/343 (46%), Gaps = 34/343 (9%)

Query: 630 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 689
           +TD+  + +++ A+ G+L      +   F  F V  G+ Y +  E++ RF  F +   + 
Sbjct: 36  VTDRAASTLES-AVLGALGRTRHAL--RFARFAVGYGKSYESAAEVRRRFRIFSESLEEV 92

Query: 690 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME--VEKD 739
                     R G + FSD S           W E    R+ A +     +     +   
Sbjct: 93  RSTNRKGLPYRLGINRFSDMS-----------WEEFQATRLGAAQTCSATLAGNHLMRDA 141

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
             +P+  DWR+  +  P  +QA CGSCW FS  G LE  Y   TGK +  S+ QLV+CA 
Sbjct: 142 AALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAG 201

Query: 800 QCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDF 854
             +  GC+G     + EY  +  G+++E+ YPYK  NG    C Y  + + V++    + 
Sbjct: 202 GFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNG---VCHYKAENAAVQVLDSVN- 257

Query: 855 LHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 913
           +  N  + +K  +    P+SV     D    Y       +    +P D+ HAVL VGYG 
Sbjct: 258 ITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGV 317

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           ++ +PYWL++NSWG    D G+FK+E G N C I   A Y  +
Sbjct: 318 ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVV 360



 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 160/344 (46%), Gaps = 35/344 (10%)

Query: 264 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 323
           +TD+  + +++ A+ G+L      +   F  F V  G+ Y +  E++ RF  F +   + 
Sbjct: 36  VTDRAASTLES-AVLGALGRTRHAL--RFARFAVGYGKSYESAAEVRRRFRIFSESLEEV 92

Query: 324 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME--VEKD 373
                     R G + FSD S           W E    R+ A +     +     +   
Sbjct: 93  RSTNRKGLPYRLGINRFSDMS-----------WEEFQATRLGAAQTCSATLAGNHLMRDA 141

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
             +P+  DWR+  +  P  +QA CGSCW FS  G LE  Y   TGK +  S+ QLV+CA 
Sbjct: 142 AALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAG 201

Query: 434 QCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAY--DKSKVKLFTGKDF 489
             +  G   GL  Q  EY  +  G+++E+ YPY+  NG    C Y  + + V++    + 
Sbjct: 202 GFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNG---VCHYKAENAAVQVLDSVN- 257

Query: 490 LYFNGSETMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG 547
           +  N  + +K  +    P+SV          + +G     +  T +P D+ HAVL VGYG
Sbjct: 258 ITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVYTSDHCGT-TPDDVNHAVLAVGYG 316

Query: 548 KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
            ++ +PYWL +NSWG    D G+FK+E G N C I   A Y  +
Sbjct: 317 VENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVV 360



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  +QA CGSCW FS  G LE  Y   TGK +  S+ QLV+CA   
Sbjct: 144 LPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGF 203

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLH 125
           +  GC+G     + EY  +  G+++E+ YPYK  NG    C Y  + + V++    + + 
Sbjct: 204 NNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNG---VCHYKAENAAVQVLDSVN-IT 259

Query: 126 FNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
            N  + +K  +    P+SV     D    Y       +    +P D+ HAVL VGYG ++
Sbjct: 260 LNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVEN 319

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +PYWL++NSWG    D G+FK+E G N C I   A Y  +
Sbjct: 320 GVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVV 360



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +P D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N C I   A Y  +
Sbjct: 302  TPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVV 360


>gi|410960470|ref|XP_003986812.1| PREDICTED: pro-cathepsin H [Felis catus]
          Length = 321

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 153/311 (49%), Gaps = 30/311 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEILCK 709
           FK+++V+  ++Y++ EE + R + F          +      + G ++FSD S  EI  K
Sbjct: 21  FKSWMVQHQKRYSS-EEYQRRLQTFVGNWRRISAHNAGNHTFKMGLNQFSDMSFAEI--K 77

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A R         +   GP P   DWR K     P  +Q  CGSCW 
Sbjct: 78  HKYLWSEP--QNCSATRGNY------LRGTGPYPPFVDWRTKGKYVSPVKNQGGCGSCWT 129

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AIKTGKL+  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 130 FSTTGALESAIAIKTGKLLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 189

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVLLN-SDLI 882
            YPYK  +G+   C +  SK   F  KD   +  N  E M + +  Y P+S     +D  
Sbjct: 190 TYPYKGQDGD---CKFQPSKAIAFV-KDVANITINDEEAMVEAVALYNPVSFAFEVTDDF 245

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y            +P  + HAVL VGYG++D IPYW+V+NSWGP    +G+F IERG 
Sbjct: 246 MMYRKGVYSSTSCHKTPDKVNHAVLAVGYGEKDGIPYWIVKNSWGPQWGMKGYFLIERGK 305

Query: 943 NACGIEQIAGY 953
           N CG+   A Y
Sbjct: 306 NMCGLAACASY 316



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 157/316 (49%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEILCK 343
           FK+++V+  ++Y++ EE + R + F          +      + G ++FSD S  EI  K
Sbjct: 21  FKSWMVQHQKRYSS-EEYQRRLQTFVGNWRRISAHNAGNHTFKMGLNQFSDMSFAEI--K 77

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A R         +   GP P   DWR K     P  +Q  CGSCW 
Sbjct: 78  HKYLWSEP--QNCSATRGNY------LRGTGPYPPFVDWRTKGKYVSPVKNQGGCGSCWT 129

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AIKTGKL+  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 130 FSTTGALESAIAIKTGKLLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 189

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGL---NSH 515
            YPY+  +G+   C +  SK   F  KD   +  N  E M + +  Y P+S      +  
Sbjct: 190 TYPYKGQDGD---CKFQPSKAIAFV-KDVANITINDEEAMVEAVALYNPVSFAFEVTDDF 245

Query: 516 LIH---FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +++    Y+ T   K     +P  + HAVL VGYG++D IPYW+ +NSWGP    +G+F 
Sbjct: 246 MMYRKGVYSSTSCHK-----TPDKVNHAVLAVGYGEKDGIPYWIVKNSWGPQWGMKGYFL 300

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 301 IERGKNMCGLAACASY 316



 Score =  146 bits (368), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 115/221 (52%), Gaps = 11/221 (4%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P   DWR K     P  +Q  CGSCW FS  G LE   AIKTGKL+  ++ QLV+CA
Sbjct: 100 GPYPPFVDWRTKGKYVSPVKNQGGCGSCWTFSTTGALESAIAIKTGKLLSLAEQQLVDCA 159

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPYK  +G+   C +  SK   F  KD  
Sbjct: 160 QNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDGD---CKFQPSKAIAFV-KDVA 215

Query: 124 -LHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
            +  N  E M + +  Y P+S     +D    Y            +P  + HAVL VGYG
Sbjct: 216 NITINDEEAMVEAVALYNPVSFAFEVTDDFMMYRKGVYSSTSCHKTPDKVNHAVLAVGYG 275

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           ++D IPYW+V+NSWGP    +G+F IERG N CG+   A Y
Sbjct: 276 EKDGIPYWIVKNSWGPQWGMKGYFLIERGKNMCGLAACASY 316



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 40/56 (71%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG++D IPYW+V+NSWGP    +G+F IERG N CG+   A Y
Sbjct: 261  TPDKVNHAVLAVGYGEKDGIPYWIVKNSWGPQWGMKGYFLIERGKNMCGLAACASY 316


>gi|410974700|ref|XP_003993781.1| PREDICTED: cathepsin F [Felis catus]
          Length = 459

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 150/314 (47%), Gaps = 29/314 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           FK F+    R Y   EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 162 FKEFVTTYNRTYGTQEEAQWRLSVFSNNMVRAQKIQALDRGTAQYGITKFSDLTEEEF-- 219

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGP-VPDAWDWRKKNVTGPAGDQAACGSCW 401
                   R        +E   KM+   +  G   P  WDWR K       +Q  CGSCW
Sbjct: 220 --------RAIYLNPLLKENRNKMMHLAKSIGDHAPPEWDWRTKGAVTNVKNQGMCGSCW 271

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKD 461
           AFS+ G +EGQ+ +K G L+  S+ +L++C K    C G       +   +  GLE+E D
Sbjct: 272 AFSVTGNVEGQWFLKQGDLLSLSEQELLDCDKVDKACLGGLPSNAYLAIKNLGGLETEDD 331

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           Y Y   +G    C++   K K++           + +   L K GP+SV +N+  + FY 
Sbjct: 332 YSY---SGHLQTCSFSAKKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGMQFYR 388

Query: 522 ---GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
                P+R     CSP+ + HAVLLVGYG +  IP+W  +NSWG    +EG++ + RG+ 
Sbjct: 389 RGISHPLRP---LCSPWLIDHAVLLVGYGNRSGIPFWAIKNSWGTDWGEEGYYYLYRGSG 445

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A ++
Sbjct: 446 ACGVNAMASSAVVN 459



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 152/316 (48%), Gaps = 34/316 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           FK F+    R Y   EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 162 FKEFVTTYNRTYGTQEEAQWRLSVFSNNMVRAQKIQALDRGTAQYGITKFSDLTEEEF-- 219

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGP-VPDAWDWRKKNVTGPAGDQAACGSCW 767
                   R        +E   KM+   +  G   P  WDWR K       +Q  CGSCW
Sbjct: 220 --------RAIYLNPLLKENRNKMMHLAKSIGDHAPPEWDWRTKGAVTNVKNQGMCGSCW 271

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESE 824
           AFS+ G +EGQ+ +K G L+  S+ +L++C K    C G    PS  Y    +  GLE+E
Sbjct: 272 AFSVTGNVEGQWFLKQGDLLSLSEQELLDCDKVDKACLGGL--PSNAYLAIKNLGGLETE 329

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
            DY Y   +G    C++   K K++           + +   L K GP+SV +N+  +  
Sbjct: 330 DDYSY---SGHLQTCSFSAKKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGMQF 386

Query: 885 YN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           Y      P+R     CSP+ + HAVLLVGYG +  IP+W ++NSWG    +EG++ + RG
Sbjct: 387 YRRGISHPLRP---LCSPWLIDHAVLLVGYGNRSGIPFWAIKNSWGTDWGEEGYYYLYRG 443

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A ++
Sbjct: 444 SGACGVNAMASSAVVN 459



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 119/222 (53%), Gaps = 14/222 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K  
Sbjct: 246 APPEWDWRTKGAVTNVKNQGMCGSCWAFSVTGNVEGQWFLKQGDLLSLSEQELLDCDKVD 305

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y    +  GLE+E DY Y   +G    C++   K K++         
Sbjct: 306 KACLGGL--PSNAYLAIKNLGGLETEDDYSY---SGHLQTCSFSAKKAKVYINDSVELSQ 360

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
             + +   L K GP+SV +N+  +  Y      P+R     CSP+ + HAVLLVGYG + 
Sbjct: 361 NEQKLAAWLAKKGPISVAINAFGMQFYRRGISHPLRP---LCSPWLIDHAVLLVGYGNRS 417

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 418 GIPFWAIKNSWGTDWGEEGYYYLYRGSGACGVNAMASSAVVN 459



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +  IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 399  CSPWLIDHAVLLVGYGNRSGIPFWAIKNSWGTDWGEEGYYYLYRGSGACGVNAMASSAVV 458

Query: 1025 D 1025
            +
Sbjct: 459  N 459


>gi|7381221|gb|AAF61441.1|AF138265_1 papain-like cysteine proteinase isoform II [Ipomoea batatas]
          Length = 366

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 162/343 (47%), Gaps = 47/343 (13%)

Query: 650 DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDR 701
           D  N    F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD 
Sbjct: 41  DLLNADHHFTVFKRRFGKVYASDEEHDYRLSVFKANMRRAKQHQELDPAAVHGVTQFSDL 100

Query: 702 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
           +P E   +  F    R   +  AD  K   +L   E    +P  +DWR      P  +Q 
Sbjct: 101 TPTEF--RRKFLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQG 152

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPS 812
            CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G     +
Sbjct: 153 TCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSA 212

Query: 813 IEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG 871
            EYT +A GL  E+DYPY   + +   C +DK+K+        +     + +   L K G
Sbjct: 213 FEYTLKAGGLMREEDYPYTGNDLQ--VCRFDKTKIAAKVANFSVVSLDEDQIAANLVKNG 270

Query: 872 PLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYW 920
           PL+V +N+  +  Y G           PY     L H VLLVGYG       +    PYW
Sbjct: 271 PLAVAINAVFVQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYW 323

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVVKND 962
           +++NSWG    + G++KI RG N CG++  ++  A +    +D
Sbjct: 324 IIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAVSTTTSD 366



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 158/330 (47%), Gaps = 45/330 (13%)

Query: 284 DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDR 335
           D  N    F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD 
Sbjct: 41  DLLNADHHFTVFKRRFGKVYASDEEHDYRLSVFKANMRRAKQHQELDPAAVHGVTQFSDL 100

Query: 336 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
           +P E   +  F    R   +  AD  K   +L   E    +P  +DWR      P  +Q 
Sbjct: 101 TPTEF--RRKFLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQG 152

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQP 447
            CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G  +   
Sbjct: 153 TCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSA 212

Query: 448 IEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYG 506
            EYT +A GL  E+DYPY  GN  +  C +DK+K+        +     + +   L K G
Sbjct: 213 FEYTLKAGGLMREEDYPY-TGNDLQV-CRFDKTKIAAKVANFSVVSLDEDQIAANLVKNG 270

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYW 555
           PL+V +N+  +  Y G           PY     L H VLLVGYG       +  + PYW
Sbjct: 271 PLAVAINAVFVQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYW 323

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           + +NSWG    + G++KI RG N CG++ +
Sbjct: 324 IIKNSWGESWGENGYYKICRGRNVCGVDSM 353



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 116/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR      P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 133 LPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 192

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY   + +   C +DK+K+     
Sbjct: 193 DPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQ--VCRFDKTKIAAKVA 250

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NFSVVSLDEDQIAANLVKNGPLAVAINAVFVQTYIGG-------VSCPYICSKRLDHGVL 303

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 353



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 298  LDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 353


>gi|5881566|dbj|BAA84280.1| Cysteine proteinase [Clonorchis sinensis]
          Length = 232

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 124/239 (51%), Gaps = 19/239 (7%)

Query: 722 IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAI 781
           +  D    E + M+ EK       +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  
Sbjct: 8   VSEDLTPEEDVTMDNEK-------FDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFR 60

Query: 782 KTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFK 838
           KTG L+  S+ QLV+C     GCDG +  P   YT      GLE   DYPY    G    
Sbjct: 61  KTGHLLALSEQQLVDCDYLDDGCDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---I 115

Query: 839 CAYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 897
           C  DKSK V    G   L  +     +K L   GPLS  LN+D +  Y G  +R   + C
Sbjct: 116 CHMDKSKFVAYINGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWC 172

Query: 898 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
            P  + HAVL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 173 DPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 231



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/217 (42%), Positives = 117/217 (53%), Gaps = 12/217 (5%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  KTG L+  S+ QLV+C     G
Sbjct: 23  EKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDYLDDG 82

Query: 73  CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNG 128
           CDG +  P   YT      GLE   DYPY    G    C  DKSK V    G   L  + 
Sbjct: 83  CDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKFVAYINGSTILPLSE 137

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
               +K L   GPLS  LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PY
Sbjct: 138 KVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPY 194

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 195 WIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 231



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 119/239 (49%), Gaps = 18/239 (7%)

Query: 356 IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAI 415
           +  D    E + M+ EK       +DWR+    GP  DQ  CGSCWAFS+ G + GQ+  
Sbjct: 8   VSEDLTPEEDVTMDNEK-------FDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFR 60

Query: 416 KTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLESEKDYPYRNGNGEKF 472
           KTG L+  S+ QLV+C        GCDG   P  YT      GLE   DYPY    G   
Sbjct: 61  KTGHLLALSEQQLVDCDYLDD---GCDGGYPPQTYTAIQKMGGLELASDYPYTGVGG--- 114

Query: 473 KCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETC 532
            C  DKSK   +     +     +   + L   GPLS  LN+  +  Y G  +R   + C
Sbjct: 115 ICHMDKSKFVAYINGSTILPLSEKVQAQKLRAIGPLSSALNADTLQLYKGGIMRP--KWC 172

Query: 533 SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
            P  + HAVL VGYG Q+  PYW+ +NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 173 DPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 231



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + HAVL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 172  CDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 231


>gi|21593213|gb|AAM65162.1| cysteine proteinase RD19A [Arabidopsis thaliana]
          Length = 368

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 157/330 (47%), Gaps = 46/330 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           F  F  K G+ YA++EE   RF  FK +  +  +H++      +G ++FSD +  E   K
Sbjct: 51  FSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKK 110

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                  R+  ++  D  K   +  E      +P+ +DWR      P  +Q +CGSCW+F
Sbjct: 111 ---HLGVRSGFKLPKDANKAPILPTE-----NLPEDFDWRDHGAVTPVKNQGSCGSCWSF 162

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G     + E+T +  
Sbjct: 163 SATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEHTLKTG 222

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY   +G+   C  DKSK+        +     E +   L K GPL+V +N+
Sbjct: 223 GLMKEEDYPYTGKDGK--TCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINA 280

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +    PYW+++NSWG 
Sbjct: 281 GYMQTYIGG-------VSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGE 333

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATIDV 958
              + GF+KI +G N CG++ +       V
Sbjct: 334 TWGENGFYKICKGRNICGVDSMVSTVAATV 363



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 157/330 (47%), Gaps = 45/330 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           F  F  K G+ YA++EE   RF  FK +  +  +H++      +G ++FSD +  E   K
Sbjct: 51  FSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKK 110

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                  R+  ++  D  K   +  E      +P+ +DWR      P  +Q +CGSCW+F
Sbjct: 111 ---HLGVRSGFKLPKDANKAPILPTE-----NLPEDFDWRDHGAVTPVKNQGSCGSCWSF 162

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G  +    E+T +  
Sbjct: 163 SATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEHTLKTG 222

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY   +G+   C  DKSK+        +     E +   L K GPL+V +N+
Sbjct: 223 GLMKEEDYPYTGKDGK--TCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINA 280

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  + PYW+ +NSWG 
Sbjct: 281 GYMQTYIGG-------VSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGE 333

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATIDV 593
              + GF+KI +G N CG++ +       V
Sbjct: 334 TWGENGFYKICKGRNICGVDSMVSTVAATV 363



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 117/238 (49%), Gaps = 30/238 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR      P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 135 LPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + E+T +  GL  E+DYPY   +G+   C  DKSK+     
Sbjct: 195 DPEEADSCDSGCNGGLMNSAFEHTLKTGGLMKEEDYPYTGKDGK--TCKLDKSKIVASVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 253 NFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGG-------VSCPYICTRRLNHGVL 305

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           LVGYG       +    PYW+++NSWG    + GF+KI +G N CG++ +       V
Sbjct: 306 LVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATV 363


>gi|444510192|gb|ELV09527.1| Cathepsin F [Tupaia chinensis]
          Length = 597

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 144/310 (46%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           FK F+    R Y   EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 300 FKNFVTTYNRTYQTKEEAQWRLSVFASNMVRAQKIQALDHGTAQYGVTKFSDLTEEEF-- 357

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                     Y   +      +KM +      P P  WDWRK        DQ  CGSCWA
Sbjct: 358 -------RTIYLNPLLREVPGKKMHLAKSIGDPAPPEWDWRKNGAVTKVKDQGMCGSCWA 410

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+E DY
Sbjct: 411 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDY 470

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
            Y+   G    C +   K K++           + +   L K GP+SV +N+  + FY  
Sbjct: 471 SYQ---GHMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGMQFYRH 527

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
                    CSP+ + HAVL+VGYG + ++P+W  +NSWG    ++G++ + RG+ +CG+
Sbjct: 528 GIAHPLRPLCSPWLIDHAVLIVGYGNRSEVPFWAIKNSWGTDWGEKGYYYLHRGSGSCGV 587

Query: 583 EQIAGYATID 592
             +A  A ++
Sbjct: 588 NTMASSAVVN 597



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 147/312 (47%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           FK F+    R Y   EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 300 FKNFVTTYNRTYQTKEEAQWRLSVFASNMVRAQKIQALDHGTAQYGVTKFSDLTEEEF-- 357

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                     Y   +      +KM +      P P  WDWRK        DQ  CGSCWA
Sbjct: 358 -------RTIYLNPLLREVPGKKMHLAKSIGDPAPPEWDWRKNGAVTKVKDQGMCGSCWA 410

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEK 825
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  GLE+E 
Sbjct: 411 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGLETED 468

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DY Y+   G    C +   K K++           + +   L K GP+SV +N+  +  Y
Sbjct: 469 DYSYQ---GHMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGMQFY 525

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                      CSP+ + HAVL+VGYG +  +P+W ++NSWG    ++G++ + RG+ +C
Sbjct: 526 RHGIAHPLRPLCSPWLIDHAVLIVGYGNRSEVPFWAIKNSWGTDWGEKGYYYLHRGSGSC 585

Query: 946 GIEQIAGYATID 957
           G+  +A  A ++
Sbjct: 586 GVNTMASSAVVN 597



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 116/220 (52%), Gaps = 8/220 (3%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P P  WDWRK        DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K 
Sbjct: 383 PAPPEWDWRKNGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKM 442

Query: 70  CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
              C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++        
Sbjct: 443 DKACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQACNFSAEKAKVYINDSVELS 497

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
              + +   L K GP+SV +N+  +  Y           CSP+ + HAVL+VGYG +  +
Sbjct: 498 QNEQKLAAWLAKKGPISVAINAFGMQFYRHGIAHPLRPLCSPWLIDHAVLIVGYGNRSEV 557

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           P+W ++NSWG    ++G++ + RG+ +CG+  +A  A ++
Sbjct: 558 PFWAIKNSWGTDWGEKGYYYLHRGSGSCGVNTMASSAVVN 597



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVL+VGYG + ++P+W ++NSWG    ++G++ + RG+ +CG+  +A  A +
Sbjct: 537  CSPWLIDHAVLIVGYGNRSEVPFWAIKNSWGTDWGEKGYYYLHRGSGSCGVNTMASSAVV 596

Query: 1025 D 1025
            +
Sbjct: 597  N 597


>gi|9635308|ref|NP_059206.1| ORF58 [Xestia c-nigrum granulovirus]
 gi|13124001|sp|Q9PYY5.1|CATV_GVXN RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|6175702|gb|AAF05172.1|AF162221_58 ORF58 [Xestia c-nigrum granulovirus]
          Length = 346

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 160/312 (51%), Gaps = 22/312 (7%)

Query: 647 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEF 698
           + +D  N  E F  F+VK  + Y +D+E + RFE FKQ+    + R        +  +  
Sbjct: 32  IAYDMSNAQELFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSR 91

Query: 699 SDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 757
           +D S  E+L K TG K S    E+           ++  +  G VPD++DWR +N     
Sbjct: 92  ADISSNELLQKLTGLKLSLMRGEK---KNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSV 148

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH 817
             Q  CGSCWAFS    +E  Y IK    ++ S+ QLV+C K  +GC+G     + E   
Sbjct: 149 KMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDKVNNGCNGGLMSWAFEGII 208

Query: 818 QA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVL 876
           +A G+  E  YPY   +G    C      V+L +G         + ++++L++ GP+SV 
Sbjct: 209 RAGGISYEAPYPYTGVDG---VCKNTTRYVQL-SGCYAYDLRSEKKLRQVLHEKGPVSVA 264

Query: 877 LNSDLIHDYNGTPIRKNDETCS-PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
           ++   + +Y     +     CS  + L H VLLVGYG+++++ YW ++NSWG    ++GF
Sbjct: 265 IDVVDLTNYKSGVAKH----CSVDHGLNHGVLLVGYGQENDVKYWTLKNSWGSDWGEQGF 320

Query: 936 FKIERGNNACGI 947
           F+I+R  N+CGI
Sbjct: 321 FRIKRDVNSCGI 332



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 160/314 (50%), Gaps = 25/314 (7%)

Query: 281 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEF 332
           + +D  N  E F  F+VK  + Y +D+E + RFE FKQ+    + R        +  +  
Sbjct: 32  IAYDMSNAQELFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSR 91

Query: 333 SDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 391
           +D S  E+L K TG K S    E+           ++  +  G VPD++DWR +N     
Sbjct: 92  ADISSNELLQKLTGLKLSLMRGEK---KNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSV 148

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT 451
             Q  CGSCWAFS    +E  Y IK    ++ S+ QLV+C K  +GC G   +    E  
Sbjct: 149 KMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDKVNNGCNG-GLMSWAFEGI 207

Query: 452 HQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSV 510
            +A G+  E  YPY   +G    C      V+L +G         + ++++L++ GP+SV
Sbjct: 208 IRAGGISYEAPYPYTGVDG---VCKNTTRYVQL-SGCYAYDLRSEKKLRQVLHEKGPVSV 263

Query: 511 GLN-SHLIHFYNGTPIRKNDETCS-PYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            ++   L ++ +G       + CS  + L H VLLVGYG+++D+ YW  +NSWG    ++
Sbjct: 264 AIDVVDLTNYKSGVA-----KHCSVDHGLNHGVLLVGYGQENDVKYWTLKNSWGSDWGEQ 318

Query: 569 GFFKIERGNNACGI 582
           GFF+I+R  N+CGI
Sbjct: 319 GFFRIKRDVNSCGI 332



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 118/213 (55%), Gaps = 10/213 (4%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           +  G VPD++DWR +N       Q +CGSCWAFS    +E  Y IK    ++ S+ QLV+
Sbjct: 128 DSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVD 187

Query: 66  CAKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           C K  +GC+G     + E   +A G+  E  YPY   +G    C      V+L +G    
Sbjct: 188 CDKVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDG---VCKNTTRYVQL-SGCYAY 243

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS-PYDLGHAVLLVGYGKQ 183
                + ++++L++ GP+SV ++   + +Y     +     CS  + L H VLLVGYG++
Sbjct: 244 DLRSEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAKH----CSVDHGLNHGVLLVGYGQE 299

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           +++ YW ++NSWG    ++GFF+I+R  N+CGI
Sbjct: 300 NDVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 36/46 (78%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            L H VLLVGYG+++D+ YW ++NSWG    ++GFF+I+R  N+CGI
Sbjct: 287  LNHGVLLVGYGQENDVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332


>gi|115495381|ref|NP_001068884.1| cathepsin F precursor [Bos taurus]
 gi|111304901|gb|AAI20004.1| Cathepsin F [Bos taurus]
 gi|296471599|tpg|DAA13714.1| TPA: cathepsin F [Bos taurus]
          Length = 460

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 150/317 (47%), Gaps = 27/317 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F+    R Y + EE   R   F  +  +  +         RYG ++FSD + E
Sbjct: 159 MASIFKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTARYGVTKFSDLTEE 218

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E   +T +         ++ D         +   D P P  WDWR K       DQ  CG
Sbjct: 219 EF--RTIY------LNPLLKDAPGRNMRPAQPVTDVPPPQ-WDWRNKGAVTNVKDQGMCG 269

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +K G L+  S+ +L++C K    C G              GLE+
Sbjct: 270 SCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDKTDKACLGGLPSNAYSAIRTLGGLET 329

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY YR   G    C++   K K++           + +   L K GP+S+ +N+  + 
Sbjct: 330 EDDYSYR---GRLQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKNGPVSIAINAFGMQ 386

Query: 519 FYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
           FY      P+R     CSP+ + HAVLLVGYG +  IP+W  +NSWG    +EG++ + R
Sbjct: 387 FYRHGISHPLR---PLCSPWLIDHAVLLVGYGNRSAIPFWAIKNSWGTDWGEEGYYYLHR 443

Query: 576 GNNACGIEQIAGYATID 592
           G+ ACG+  +A  A I+
Sbjct: 444 GSGACGVNIMASSAVIN 460



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 154/319 (48%), Gaps = 32/319 (10%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F+    R Y + EE   R   F  +  +  +         RYG ++FSD + E
Sbjct: 159 MASIFKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTARYGVTKFSDLTEE 218

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E   +T +         ++ D         +   D P P  WDWR K       DQ  CG
Sbjct: 219 EF--RTIY------LNPLLKDAPGRNMRPAQPVTDVPPPQ-WDWRNKGAVTNVKDQGMCG 269

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QAGL 821
           SCWAFS+ G +EGQ+ +K G L+  S+ +L++C K    C G    PS  Y+      GL
Sbjct: 270 SCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDKTDKACLGGL--PSNAYSAIRTLGGL 327

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y+   G    C++   K K++           + +   L K GP+S+ +N+  
Sbjct: 328 ETEDDYSYR---GRLQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKNGPVSIAINAFG 384

Query: 882 IHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +  Y      P+R     CSP+ + HAVLLVGYG +  IP+W ++NSWG    +EG++ +
Sbjct: 385 MQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSAIPFWAIKNSWGTDWGEEGYYYL 441

Query: 939 ERGNNACGIEQIAGYATID 957
            RG+ ACG+  +A  A I+
Sbjct: 442 HRGSGACGVNIMASSAVIN 460



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 119/221 (53%), Gaps = 14/221 (6%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K   
Sbjct: 248 PPQWDWRNKGAVTNVKDQGMCGSCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDKTDK 307

Query: 72  GCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
            C G    PS  Y+      GLE+E DY Y+   G    C++   K K++          
Sbjct: 308 ACLGGL--PSNAYSAIRTLGGLETEDDYSYR---GRLQTCSFSAEKAKVYINDSVELSKN 362

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            + +   L K GP+S+ +N+  +  Y      P+R     CSP+ + HAVLLVGYG +  
Sbjct: 363 EQKLAAWLAKNGPVSIAINAFGMQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSA 419

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A I+
Sbjct: 420 IPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNIMASSAVIN 460



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +  IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A I
Sbjct: 400  CSPWLIDHAVLLVGYGNRSAIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNIMASSAVI 459

Query: 1025 D 1025
            +
Sbjct: 460  N 460


>gi|290984408|ref|XP_002674919.1| predicted protein [Naegleria gruberi]
 gi|284088512|gb|EFC42175.1| predicted protein [Naegleria gruberi]
          Length = 353

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 162/345 (46%), Gaps = 41/345 (11%)

Query: 645 GSLTFDNEN--------ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK------- 689
           G L FD E         + + F  F  K  R Y   EE + R + F+++           
Sbjct: 16  GILAFDQETYQPLSETAVRDHFLDFTRKFQRFYKGPEEYEYRLKVFRENIETSRRMNIRE 75

Query: 690 -HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 748
            +  YG ++FSD + +E   +  +   ++T + I          ++      P PD +DW
Sbjct: 76  GNNNYGITKFSDLTSDEF--RKFYLMEKKTPKEIQKMMRMDSNKMVSNSYAKPAPDHYDW 133

Query: 749 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------- 801
           R         DQ  CGSCWAFS  G +EG YAIK  +LV FS+ QLV+C   C       
Sbjct: 134 RNHGAITGVKDQGQCGSCWAFSAIGSIEGSYAIKHKQLVSFSEQQLVDCDNNCVTFENQQ 193

Query: 802 ---SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLH 856
               GC+G     + +Y  +A G+ +EKDYPY     E++KC    +  V   +    L 
Sbjct: 194 SCDDGCNGGLQWSAYQYLMKAGGVVTEKDYPYY---AERYKCEVKPANFVAKLSNWTMLS 250

Query: 857 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD- 915
            N +E M   L + GP++V LN+D + +YN      +   C P  L H VL+VGYG +  
Sbjct: 251 TNETE-MANWLAENGPIAVALNADFLQNYNNGI--ADPAWCDPTQLDHGVLIVGYGLETF 307

Query: 916 ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
                 PYW+V+NSWG    ++G+F+I +G   CGI  +   A +
Sbjct: 308 WFGKPQPYWIVKNSWGYDFGEDGYFRIVKGVGRCGINTVPSAAFV 352



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 158/345 (45%), Gaps = 40/345 (11%)

Query: 279 GSLTFDNEN--------ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK------- 323
           G L FD E         + + F  F  K  R Y   EE + R + F+++           
Sbjct: 16  GILAFDQETYQPLSETAVRDHFLDFTRKFQRFYKGPEEYEYRLKVFRENIETSRRMNIRE 75

Query: 324 -HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 382
            +  YG ++FSD + +E   +  +   ++T + I          ++      P PD +DW
Sbjct: 76  GNNNYGITKFSDLTSDEF--RKFYLMEKKTPKEIQKMMRMDSNKMVSNSYAKPAPDHYDW 133

Query: 383 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------- 435
           R         DQ  CGSCWAFS  G +EG YAIK  +LV FS+ QLV+C   C       
Sbjct: 134 RNHGAITGVKDQGQCGSCWAFSAIGSIEGSYAIKHKQLVSFSEQQLVDCDNNCVTFENQQ 193

Query: 436 SGCGGCDGLEQPIEYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSK-VKLFTGKDFLY 491
           S   GC+G  Q   Y +     G+ +EKDYPY     E++KC    +  V   +    L 
Sbjct: 194 SCDDGCNGGLQWSAYQYLMKAGGVVTEKDYPYY---AERYKCEVKPANFVAKLSNWTMLS 250

Query: 492 FNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD- 550
            N +E M   L + GP++V LN+  +  YN      +   C P  L H VL+VGYG +  
Sbjct: 251 TNETE-MANWLAENGPIAVALNADFLQNYNNGI--ADPAWCDPTQLDHGVLIVGYGLETF 307

Query: 551 ----DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
                 PYW+ +NSWG    ++G+F+I +G   CGI  +   A +
Sbjct: 308 WFGKPQPYWIVKNSWGYDFGEDGYFRIVKGVGRCGINTVPSAAFV 352



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 121/233 (51%), Gaps = 23/233 (9%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P PD +DWR         DQ  CGSCWAFS  G +EG YAIK  +LV FS+ QLV+C   
Sbjct: 126 PAPDHYDWRNHGAITGVKDQGQCGSCWAFSAIGSIEGSYAIKHKQLVSFSEQQLVDCDNN 185

Query: 70  C----------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK-VKL 117
           C           GC+G     + +Y  +A G+ +EKDYPY     E++KC    +  V  
Sbjct: 186 CVTFENQQSCDDGCNGGLQWSAYQYLMKAGGVVTEKDYPYY---AERYKCEVKPANFVAK 242

Query: 118 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
            +    L  N +E M   L + GP++V LN+D + +YN      +   C P  L H VL+
Sbjct: 243 LSNWTMLSTNETE-MANWLAENGPIAVALNADFLQNYNNGI--ADPAWCDPTQLDHGVLI 299

Query: 178 VGYGKQD-----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           VGYG +        PYW+V+NSWG    ++G+F+I +G   CGI  +   A +
Sbjct: 300 VGYGLETFWFGKPQPYWIVKNSWGYDFGEDGYFRIVKGVGRCGINTVPSAAFV 352



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)

Query: 965  CSPYDLGHAVLLVGYGKQD-----DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 1019
            C P  L H VL+VGYG +        PYW+V+NSWG    ++G+F+I +G   CGI  + 
Sbjct: 288  CDPTQLDHGVLIVGYGLETFWFGKPQPYWIVKNSWGYDFGEDGYFRIVKGVGRCGINTVP 347

Query: 1020 GYATI 1024
              A +
Sbjct: 348  SAAFV 352


>gi|33945877|emb|CAE45588.1| papain-like cysteine proteinase-like protein 1 [Lotus japonicus]
          Length = 359

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 153/323 (47%), Gaps = 48/323 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 709
           F  F  + G+ YA +EE   RF  FK + H+            +G ++FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTQFSDLTPME---- 100

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CGSCW+F
Sbjct: 101 --FQHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWREHGAVTPVKNQGSCGSCWSF 155

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVEC-AKQC---------SGCDGCFFEPSIEYT-HQ 818
           S  G LEG + + TG+LV  S+ QLV+C  +QC         SGC+G     + EY  + 
Sbjct: 156 SATGALEGAHFLSTGELVSLSEQQLVDCDHQQCDPEEAGSCDSGCNGGLMNSAFEYILNN 215

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
            G+  E+DYPY   NG    C +DK+K+        +     + +   L K GPL+V +N
Sbjct: 216 GGVMREEDYPYSGTNGG--TCKFDKAKIAASVANFSVVSRDEDQIAANLVKNGPLAVAIN 273

Query: 879 SDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQD-------NIPYWLVRNSWG 927
           +  +  Y G           PY     L H VLLVGYG +          PYW+++NSWG
Sbjct: 274 AVYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWG 326

Query: 928 PIGPDEGFFKIERGNNACGIEQI 950
               + G++KI RG N CG++ +
Sbjct: 327 ENWGENGYYKICRGRNICGVDSM 349



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 152/323 (47%), Gaps = 47/323 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 343
           F  F  + G+ YA +EE   RF  FK + H+            +G ++FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTQFSDLTPME---- 100

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CGSCW+F
Sbjct: 101 --FQHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWREHGAVTPVKNQGSCGSCWSF 155

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVEC-AKQC------SGCGGCDG--LEQPIEYT-HQ 453
           S  G LEG + + TG+LV  S+ QLV+C  +QC      S   GC+G  +    EY  + 
Sbjct: 156 SATGALEGAHFLSTGELVSLSEQQLVDCDHQQCDPEEAGSCDSGCNGGLMNSAFEYILNN 215

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
            G+  E+DYPY   NG    C +DK+K+        +     + +   L K GPL+V +N
Sbjct: 216 GGVMREEDYPYSGTNGG--TCKFDKAKIAASVANFSVVSRDEDQIAANLVKNGPLAVAIN 273

Query: 514 SHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQD-------DIPYWLARNSWG 562
           +  +  Y G           PY     L H VLLVGYG +          PYW+ +NSWG
Sbjct: 274 AVYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWG 326

Query: 563 PIGPDEGFFKIERGNNACGIEQI 585
               + G++KI RG N CG++ +
Sbjct: 327 ENWGENGYYKICRGRNICGVDSM 349



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 117/231 (50%), Gaps = 31/231 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC-AKQ 69
           +P  +DWR+     P  +Q  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C  +Q
Sbjct: 128 LPKDFDWREHGAVTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHQQ 187

Query: 70  C---------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
           C         SGC+G     + EY  +  G+  E+DYPY   NG    C +DK+K+    
Sbjct: 188 CDPEEAGSCDSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNGG--TCKFDKAKIAASV 245

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 175
               +     + +   L K GPL+V +N+  +  Y G           PY     L H V
Sbjct: 246 ANFSVVSRDEDQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYVCSKKLNHGV 298

Query: 176 LLVGYGKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LLVGYG +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 299 LLVGYGSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSM 349


>gi|391340505|ref|XP_003744580.1| PREDICTED: digestive cysteine proteinase 1-like [Metaseiulus
           occidentalis]
          Length = 469

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 163/341 (47%), Gaps = 43/341 (12%)

Query: 647 LTFDNENILETFKAFIVKRGRQYANDEEIKERF-EYFKQDGHKKHE-------------- 691
           LT +    + +  A +V  G    N E  KE F + ++ D H   +              
Sbjct: 141 LTIEMRLYIASVLALVVAVGADLTNFEHFKEHFGKTYEGDEHALRQGIFQRNLAHIEKFN 200

Query: 692 ---------RYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
                      G ++F+D S  E      G + +  T    +A   K+++ ++  ++D  
Sbjct: 201 AEKAASRGYTLGITQFADMSTAEFRQTYLGLRMNAST----IAKLRKLQREVVADDRD-- 254

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +P+A DWR K    P  DQ  CGSCWAFS +G +EGQ+ +K G+L+  S+ Q+V+C+   
Sbjct: 255 LPEAVDWRDKGAVSPVKDQGQCGSCWAFSTSGAIEGQHFLKNGELLSLSEQQMVDCSWLD 314

Query: 802 SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNG 859
            GC+G     ++EY     GLE E  YPYK   G    C  D KS     TG     F  
Sbjct: 315 FGCNGGQPMLAMEYVRFNGGLELETAYPYKGVGGS---CHSDKKSAAAKITGFWMAGFYS 371

Query: 860 SETMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
              ++K + K GP+SV +++   D  H  +G     N E+CS   L HAVL VGYG  D+
Sbjct: 372 ESALQKAVAKVGPISVGMDASGEDFQHYKSGI---YNPESCSSIGLDHAVLAVGYGTSDD 428

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
             YWLV+NSW     ++G+FK+ R   N CGI     Y T+
Sbjct: 429 GDYWLVKNSWNTSWGEKGYFKLPRNKGNKCGIATTPIYPTV 469



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 160/339 (47%), Gaps = 38/339 (11%)

Query: 281 LTFDNENILETFKAFIVKRGRQYANDEEIKERF-EYFKQDGHKKHE-------------- 325
           LT +    + +  A +V  G    N E  KE F + ++ D H   +              
Sbjct: 141 LTIEMRLYIASVLALVVAVGADLTNFEHFKEHFGKTYEGDEHALRQGIFQRNLAHIEKFN 200

Query: 326 ---------RYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
                      G ++F+D S  E      G + +  T    +A   K+++ ++  ++D  
Sbjct: 201 AEKAASRGYTLGITQFADMSTAEFRQTYLGLRMNAST----IAKLRKLQREVVADDRD-- 254

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P+A DWR K    P  DQ  CGSCWAFS +G +EGQ+ +K G+L+  S+ Q+V+C+   
Sbjct: 255 LPEAVDWRDKGAVSPVKDQGQCGSCWAFSTSGAIEGQHFLKNGELLSLSEQQMVDCSWLD 314

Query: 436 SGCGGCDGLEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLYFN 493
            GC G   +   +EY     GLE E  YPY+   G    C  D KS     TG     F 
Sbjct: 315 FGCNGGQPM-LAMEYVRFNGGLELETAYPYKGVGGS---CHSDKKSAAAKITGFWMAGFY 370

Query: 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIP 553
               ++K + K GP+SVG+++    F +      N E+CS   L HAVL VGYG  DD  
Sbjct: 371 SESALQKAVAKVGPISVGMDASGEDFQHYKSGIYNPESCSSIGLDHAVLAVGYGTSDDGD 430

Query: 554 YWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           YWL +NSW     ++G+FK+ R   N CGI     Y T+
Sbjct: 431 YWLVKNSWNTSWGEKGYFKLPRNKGNKCGIATTPIYPTV 469



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 122/227 (53%), Gaps = 12/227 (5%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           V  D  +P+A DWR K    P  DQ  CGSCWAFS +G +EGQ+ +K G+L+  S+ Q+V
Sbjct: 249 VADDRDLPEAVDWRDKGAVSPVKDQGQCGSCWAFSTSGAIEGQHFLKNGELLSLSEQQMV 308

Query: 65  ECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKD 122
           +C+    GC+G     ++EY     GLE E  YPYK   G    C  D KS     TG  
Sbjct: 309 DCSWLDFGCNGGQPMLAMEYVRFNGGLELETAYPYKGVGGS---CHSDKKSAAAKITGFW 365

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
              F     ++K + K GP+SV +++   D  H  +G     N E+CS   L HAVL VG
Sbjct: 366 MAGFYSESALQKAVAKVGPISVGMDASGEDFQHYKSGI---YNPESCSSIGLDHAVLAVG 422

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           YG  D+  YWLV+NSW     ++G+FK+ R   N CGI     Y T+
Sbjct: 423 YGTSDDGDYWLVKNSWNTSWGEKGYFKLPRNKGNKCGIATTPIYPTV 469



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            + N E+CS   L HAVL VGYG  DD  YWLV+NSW     ++G+FK+ R   N CGI  
Sbjct: 403  IYNPESCSSIGLDHAVLAVGYGTSDDGDYWLVKNSWNTSWGEKGYFKLPRNKGNKCGIAT 462

Query: 1018 IAGYATI 1024
               Y T+
Sbjct: 463  TPIYPTV 469


>gi|113208365|dbj|BAF03553.1| cysteine proteinase CP2 [Phaseolus vulgaris]
          Length = 365

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 146/327 (44%), Gaps = 48/327 (14%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPE 704
           N    F  F  K G+ YA  EE   RF  FK +  +            +G ++FSD +P 
Sbjct: 46  NAEHHFSTFKAKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDPSAVHGVTKFSDLTPA 105

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E           R +  +   R         +     +P  +DWR K       DQ +CG
Sbjct: 106 EF---------HRKFLGLKPLRLPAHAQKAPILPTNNLPKDFDWRDKGAVTNVKDQGSCG 156

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCW+FS  G LEG + + TG+LV  S+ QLV+C   C         SGC+G     + EY
Sbjct: 157 SCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGSCDSGCNGGLMNNAFEY 216

Query: 816 -THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
                G++ EKDYPY   +G    C +DKSK+        +     E +   L K GPL+
Sbjct: 217 LIGSGGVQREKDYPYTGRDG---TCKFDKSKIAASVSNYSVISLDEEQIAANLVKNGPLA 273

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVR 923
           V +N+  +  Y G           PY     L H VLLVGYG       +    PYW+++
Sbjct: 274 VAINAVYMQTYVGG-------VSCPYICGKHLDHGVLLVGYGEGAYAPIRFKEKPYWIIK 326

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQI 950
           NSWG    + G++KI RG N CG++ +
Sbjct: 327 NSWGENWGENGYYKICRGRNVCGVDSM 353



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 146/327 (44%), Gaps = 47/327 (14%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPE 338
           N    F  F  K G+ YA  EE   RF  FK +  +            +G ++FSD +P 
Sbjct: 46  NAEHHFSTFKAKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDPSAVHGVTKFSDLTPA 105

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E           R +  +   R         +     +P  +DWR K       DQ +CG
Sbjct: 106 EF---------HRKFLGLKPLRLPAHAQKAPILPTNNLPKDFDWRDKGAVTNVKDQGSCG 156

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEY 450
           SCW+FS  G LEG + + TG+LV  S+ QLV+C   C      S   GC+G  +    EY
Sbjct: 157 SCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGSCDSGCNGGLMNNAFEY 216

Query: 451 -THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
                G++ EKDYPY   +G    C +DKSK+        +     E +   L K GPL+
Sbjct: 217 LIGSGGVQREKDYPYTGRDG---TCKFDKSKIAASVSNYSVISLDEEQIAANLVKNGPLA 273

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLAR 558
           V +N+  +  Y G           PY     L H VLLVGYG       +  + PYW+ +
Sbjct: 274 VAINAVYMQTYVGG-------VSCPYICGKHLDHGVLLVGYGEGAYAPIRFKEKPYWIIK 326

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQI 585
           NSWG    + G++KI RG N CG++ +
Sbjct: 327 NSWGENWGENGYYKICRGRNVCGVDSM 353



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 114/230 (49%), Gaps = 31/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K       DQ  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C   C
Sbjct: 134 LPKDFDWRDKGAVTNVKDQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVC 193

Query: 71  ---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY     G++ EKDYPY   +G    C +DKSK+     
Sbjct: 194 DPEEYGSCDSGCNGGLMNNAFEYLIGSGGVQREKDYPYTGRDG---TCKFDKSKIAASVS 250

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NYSVISLDEEQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYICGKHLDHGVL 303

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 LVGYGEGAYAPIRFKEKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 353



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 298  LDHGVLLVGYGEGAYAPIRFKEKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 353


>gi|224105327|ref|XP_002313770.1| predicted protein [Populus trichocarpa]
 gi|222850178|gb|EEE87725.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 162/334 (48%), Gaps = 49/334 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           F  F  K  + Y + EE   RF  FK +  +  +H++      +G ++FSD +  E    
Sbjct: 53  FSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAE---- 108

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+       ++   ++     ++       +P+ +DWR+K   GP  +Q +CGSCW+F
Sbjct: 109 --FRKQVLGLRKLRLPKDANTAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSF 163

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG + + TG+LV  S+ QLV+C  +C         SGC+G     + EYT +A 
Sbjct: 164 STTGALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 223

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY     ++  C +DK+KV              + +   L K GPL+V +N+
Sbjct: 224 GLMREEDYPYTGM--DRGACKFDKNKVAAGVANFSAVSLDEDQIAANLVKNGPLAVAINA 281

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +    PYW+++NSWG 
Sbjct: 282 VFMQTYIGG-------VSCPYICSRRLDHGVLLVGYGSAAYAPVRMKEKPYWIIKNSWGE 334

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATIDVVKND 962
              + GF+KI RG N CG++ +   +T+  V+ +
Sbjct: 335 SWGENGFYKICRGRNICGVDSMV--STVAAVQTN 366



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 156/322 (48%), Gaps = 46/322 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           F  F  K  + Y + EE   RF  FK +  +  +H++      +G ++FSD +  E    
Sbjct: 53  FSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAE---- 108

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+       ++   ++     ++       +P+ +DWR+K   GP  +Q +CGSCW+F
Sbjct: 109 --FRKQVLGLRKLRLPKDANTAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSF 163

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG + + TG+LV  S+ QLV+C  +C      S   GC+G  +    EYT +A 
Sbjct: 164 STTGALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 223

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY     ++  C +DK+KV              + +   L K GPL+V +N+
Sbjct: 224 GLMREEDYPYT--GMDRGACKFDKNKVAAGVANFSAVSLDEDQIAANLVKNGPLAVAINA 281

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  + PYW+ +NSWG 
Sbjct: 282 VFMQTYIGG-------VSCPYICSRRLDHGVLLVGYGSAAYAPVRMKEKPYWIIKNSWGE 334

Query: 564 IGPDEGFFKIERGNNACGIEQI 585
              + GF+KI RG N CG++ +
Sbjct: 335 SWGENGFYKICRGRNICGVDSM 356



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 120/230 (52%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K   GP  +Q  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 136 LPEDFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHEC 195

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY     ++  C +DK+KV     
Sbjct: 196 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGM--DRGACKFDKNKVAAGVA 253

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
                    + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 254 NFSAVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSRRLDHGVL 306

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 307 LVGYGSAAYAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSM 356



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 301  LDHGVLLVGYGSAAYAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSM 356


>gi|42564163|gb|AAS20593.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 324

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 150/320 (46%), Gaps = 35/320 (10%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSP 703
           E ++ F +   + Y N  E K RF  F  +  +  E              G ++F+D +P
Sbjct: 21  EKWQNFKINFSKSYQNVVEEKRRFNIFLSNLLRIEEHNQNFSRGLSTYEMGVNKFADLTP 80

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEK---DGPVPDAWDWRKKNVTGPAGDQ 760
           EE +            ER    R+   K L E  K   DG +P   DW K+        Q
Sbjct: 81  EEFM------------ERFRPLRKTKPKFLSEQAKFNFDGDLPAEVDWTKQGAVTEVKSQ 128

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG 820
            +CGSCWAFS  G +E    IKTGKL+  S+ QLV+C K  SGC G + + ++EY    G
Sbjct: 129 GSCGSCWAFSTTGSVESHNFIKTGKLISLSEQQLVDCVKNNSGCAGGWMDIALEYIEADG 188

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           + SE DYPY+  N     C ++ SK  +       +  N    ++K +   GP+SV +  
Sbjct: 189 IMSEDDYPYEERNT---TCRFNNSKAAVQIKSYKAIKKNDEIDLQKAVALEGPVSVAIEV 245

Query: 880 DLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
            +        I  ND  C  +  DL HAVL+ GYG QD   YW+V+NSWG     +G+ +
Sbjct: 246 TIAFQLYARGIL-NDPQCKNTEGDLTHAVLVTGYGSQDGKDYWIVKNSWGAEYGMDGYLR 304

Query: 938 IER-GNNACGIEQIAGYATI 956
           + R  +N CGI   A Y  +
Sbjct: 305 MSRNADNQCGIATRASYPVL 324



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 147/321 (45%), Gaps = 36/321 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSP 337
           E ++ F +   + Y N  E K RF  F  +  +  E              G ++F+D +P
Sbjct: 21  EKWQNFKINFSKSYQNVVEEKRRFNIFLSNLLRIEEHNQNFSRGLSTYEMGVNKFADLTP 80

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEK---DGPVPDAWDWRKKNVTGPAGDQ 394
           EE +            ER    R+   K L E  K   DG +P   DW K+        Q
Sbjct: 81  EEFM------------ERFRPLRKTKPKFLSEQAKFNFDGDLPAEVDWTKQGAVTEVKSQ 128

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQA 454
            +CGSCWAFS  G +E    IKTGKL+  S+ QLV+C K  SGC G   ++  +EY    
Sbjct: 129 GSCGSCWAFSTTGSVESHNFIKTGKLISLSEQQLVDCVKNNSGCAG-GWMDIALEYIEAD 187

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
           G+ SE DYPY   N     C ++ SK  +       +  N    ++K +   GP+SV + 
Sbjct: 188 GIMSEDDYPYEERNT---TCRFNNSKAAVQIKSYKAIKKNDEIDLQKAVALEGPVSVAIE 244

Query: 514 SHLIHFYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
             +        I  ND  C  +  DL HAVL+ GYG QD   YW+ +NSWG     +G+ 
Sbjct: 245 VTIAFQLYARGIL-NDPQCKNTEGDLTHAVLVTGYGSQDGKDYWIVKNSWGAEYGMDGYL 303

Query: 572 KIER-GNNACGIEQIAGYATI 591
           ++ R  +N CGI   A Y  +
Sbjct: 304 RMSRNADNQCGIATRASYPVL 324



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 114/222 (51%), Gaps = 8/222 (3%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           DG +P   DW K+        Q  CGSCWAFS  G +E    IKTGKL+  S+ QLV+C 
Sbjct: 107 DGDLPAEVDWTKQGAVTEVKSQGSCGSCWAFSTTGSVESHNFIKTGKLISLSEQQLVDCV 166

Query: 68  KQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHF 126
           K  SGC G + + ++EY    G+ SE DYPY+  N     C ++ SK  +       +  
Sbjct: 167 KNNSGCAGGWMDIALEYIEADGIMSEDDYPYEERNT---TCRFNNSKAAVQIKSYKAIKK 223

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQD 184
           N    ++K +   GP+SV +   +        I  ND  C  +  DL HAVL+ GYG QD
Sbjct: 224 NDEIDLQKAVALEGPVSVAIEVTIAFQLYARGIL-NDPQCKNTEGDLTHAVLVTGYGSQD 282

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
              YW+V+NSWG     +G+ ++ R  +N CGI   A Y  +
Sbjct: 283 GKDYWIVKNSWGAEYGMDGYLRMSRNADNQCGIATRASYPVL 324


>gi|312378084|gb|EFR24752.1| hypothetical protein AND_10451 [Anopheles darlingi]
          Length = 1785

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 175/330 (53%), Gaps = 27/330 (8%)

Query: 646  SLTFDNEN-ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHER----YGT 695
            SL  D+E  +   F+ F +   RQYA+  E + R+  F+ + +K     +HER    YG 
Sbjct: 1465 SLKIDDEAYVRRQFEKFKLHHQRQYASSFEHEMRYNIFRNNLYKIDQLNRHERGTGKYGV 1524

Query: 696  SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 755
            ++F+D +  E    TG    ++    I   R  +  +  E      +P ++DWR      
Sbjct: 1525 TKFADMTTAEYRAHTGLIVPKQHSNHI---RNPIATVSTE---RTSLPTSFDWRDHGAVT 1578

Query: 756  PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY 815
               +Q  CGSCWAFS  G +EG + IKT KL  +S+ +L++C    +GC+G + + + + 
Sbjct: 1579 GVKNQGNCGSCWAFSAIGNIEGLHQIKTKKLEAYSEQELIDCDTVDNGCNGGYMDDAFKA 1638

Query: 816  THQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPL 873
              +  GLE E +YPY+ A  +K  C ++K+ +     K  +    +ET + + L + GP+
Sbjct: 1639 IEKLGGLELEDEYPYQ-AKAQK-TCHFNKT-LSHVRVKGAVDMPKNETFIAQYLIENGPI 1695

Query: 874  SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWG 927
            ++ LN++ +  Y G         CS   + H VL+VGYG ++       +PYW ++NSWG
Sbjct: 1696 AIGLNANAMQFYRGGISHPWHLLCSHKQIDHGVLIVGYGVKEYPLFNKTLPYWTIKNSWG 1755

Query: 928  PIGPDEGFFKIERGNNACGIEQIAGYATID 957
            P   ++G+++I RG+N+CG+ ++A  A ++
Sbjct: 1756 PKWGEQGYYRIYRGDNSCGVSEMASSAILE 1785



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 173/332 (52%), Gaps = 30/332 (9%)

Query: 280  SLTFDNEN-ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHER----YGT 329
            SL  D+E  +   F+ F +   RQYA+  E + R+  F+ + +K     +HER    YG 
Sbjct: 1465 SLKIDDEAYVRRQFEKFKLHHQRQYASSFEHEMRYNIFRNNLYKIDQLNRHERGTGKYGV 1524

Query: 330  SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 389
            ++F+D +  E    TG    ++    I   R  +  +  E      +P ++DWR      
Sbjct: 1525 TKFADMTTAEYRAHTGLIVPKQHSNHI---RNPIATVSTE---RTSLPTSFDWRDHGAVT 1578

Query: 390  PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQP 447
               +Q  CGSCWAFS  G +EG + IKT KL  +S+ +L++C    +GC G   D   + 
Sbjct: 1579 GVKNQGNCGSCWAFSAIGNIEGLHQIKTKKLEAYSEQELIDCDTVDNGCNGGYMDDAFKA 1638

Query: 448  IEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYG 506
            IE     GLE E +YPY+    +K  C ++K+ +     K  +    +ET + + L + G
Sbjct: 1639 IEKL--GGLELEDEYPYQ-AKAQK-TCHFNKT-LSHVRVKGAVDMPKNETFIAQYLIENG 1693

Query: 507  PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------DIPYWLARNS 560
            P+++GLN++ + FY G         CS   + H VL+VGYG ++       +PYW  +NS
Sbjct: 1694 PIAIGLNANAMQFYRGGISHPWHLLCSHKQIDHGVLIVGYGVKEYPLFNKTLPYWTIKNS 1753

Query: 561  WGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
            WGP   ++G+++I RG+N+CG+ ++A  A ++
Sbjct: 1754 WGPKWGEQGYYRIYRGDNSCGVSEMASSAILE 1785



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 130/224 (58%), Gaps = 11/224 (4%)

Query: 11   VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            +P ++DWR         +Q +CGSCWAFS  G +EG + IKT KL  +S+ +L++C    
Sbjct: 1565 LPTSFDWRDHGAVTGVKNQGNCGSCWAFSAIGNIEGLHQIKTKKLEAYSEQELIDCDTVD 1624

Query: 71   SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            +GC+G + + + +   +  GLE E +YPY+ A  +K  C ++K+ +     K  +    +
Sbjct: 1625 NGCNGGYMDDAFKAIEKLGGLELEDEYPYQ-AKAQK-TCHFNKT-LSHVRVKGAVDMPKN 1681

Query: 130  ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD---- 184
            ET + + L + GP+++ LN++ +  Y G         CS   + H VL+VGYG ++    
Sbjct: 1682 ETFIAQYLIENGPIAIGLNANAMQFYRGGISHPWHLLCSHKQIDHGVLIVGYGVKEYPLF 1741

Query: 185  --NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
               +PYW ++NSWGP   ++G+++I RG+N+CG+ ++A  A ++
Sbjct: 1742 NKTLPYWTIKNSWGPKWGEQGYYRIYRGDNSCGVSEMASSAILE 1785



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 6/67 (8%)

Query: 965  CSPYDLGHAVLLVGYGKQD------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            CS   + H VL+VGYG ++       +PYW ++NSWGP   ++G+++I RG+N+CG+ ++
Sbjct: 1719 CSHKQIDHGVLIVGYGVKEYPLFNKTLPYWTIKNSWGPKWGEQGYYRIYRGDNSCGVSEM 1778

Query: 1019 AGYATID 1025
            A  A ++
Sbjct: 1779 ASSAILE 1785


>gi|118156|sp|P14658.1|CYSP_TRYBB RecName: Full=Cysteine proteinase; Flags: Precursor
 gi|10393|emb|CAA34485.1| unnamed protein product [Trypanosoma brucei]
          Length = 450

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 154/323 (47%), Gaps = 23/323 (7%)

Query: 645 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 696
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY- 815
              Q  CGSCWAFS  G +EGQ+ +    LV  S+  LV C    SGC+G   + +  + 
Sbjct: 141 VKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWI 200

Query: 816 --THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
             ++   + +E  YPY + NGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           ++ ++++   DYNG  +     +C+   L H VLLVGY    N PYW+++NSW  +  ++
Sbjct: 261 AIAVDAESFMDYNGGIL----TSCTSKQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 150/323 (46%), Gaps = 22/323 (6%)

Query: 279 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 330
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPI 448
              Q  CGSCWAFS  G +EGQ+ +    LV  S+  LV C    SGC G   D     I
Sbjct: 141 VKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDSGCNGGLMDNAFNWI 200

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
             ++   + +E  YPY +GNGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           ++ +++     YNG  +     +C+   L H VLLVGY    + PYW+ +NSW  +  ++
Sbjct: 261 AIAVDAESFMDYNGGIL----TSCTSKQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 113/220 (51%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P   Q  CGSCWAFS  G +EGQ+ +    LV  S+  LV C  
Sbjct: 124 GRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
             SGC+G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++          
Sbjct: 184 IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDL 243

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GPL++ ++++   DYNG  +     +C+   L H VLLVGY    N
Sbjct: 244 PQDEDAIAAYLAENGPLAIAVDAESFMDYNGGIL----TSCTSKQLDHGVLLVGYNDNSN 299

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 300 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 279  SCTSKQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|45822209|emb|CAE47501.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 325

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 157/317 (49%), Gaps = 28/317 (8%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERY---------GTSEFSDRSP 703
           E +  F VK  + Y +  E + RF  F+++  K    +E+Y         G ++F+D + 
Sbjct: 21  EEWVQFKVKNNKSYKSYVEEQTRFRIFQENLRKIENHNEKYNNGESTFKFGVTKFTDLTE 80

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           +E L       + R       +R     +L  +     +P A+DWR K       DQ  C
Sbjct: 81  KEFLDLLVLSKNAR------PNRTHATHLLAPLR---DLPSAFDWRDKGAVTEVKDQGMC 131

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ-CSGCDGCFFEPSIEYTHQAGLE 822
           GSCW FS  G +E  + +KTG LV  S+  LV+CAK  C GC G + + ++EY  + G+ 
Sbjct: 132 GSCWTFSTTGSVEAAHFLKTGNLVSLSEQNLVDCAKDTCYGCGGGWMDKALEYIEKGGIM 191

Query: 823 SEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           SEKDYPY+   G    C +D SKV    +   ++  N  E +K  +   GP+SV +++  
Sbjct: 192 SEKDYPYE---GVDDNCRFDISKVAAKISNFTYIKKNDEEDLKNAVAAKGPISVAIDASA 248

Query: 882 IHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
                 + I  + E  + +D L H VL+VGYG ++   YW+++NSWG     +G+ ++ R
Sbjct: 249 TFQLYVSGILDDTECSNEFDSLNHGVLVVGYGTENGKDYWIIKNSWGVNWGMDGYIRMSR 308

Query: 941 G-NNACGIEQIAGYATI 956
             NN CGI     Y  I
Sbjct: 309 NKNNQCGITTDGVYPNI 325



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 156/319 (48%), Gaps = 31/319 (9%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERY---------GTSEFSDRSP 337
           E +  F VK  + Y +  E + RF  F+++  K    +E+Y         G ++F+D + 
Sbjct: 21  EEWVQFKVKNNKSYKSYVEEQTRFRIFQENLRKIENHNEKYNNGESTFKFGVTKFTDLTE 80

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           +E L       + R       +R     +L  +     +P A+DWR K       DQ  C
Sbjct: 81  KEFLDLLVLSKNAR------PNRTHATHLLAPLR---DLPSAFDWRDKGAVTEVKDQGMC 131

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ-CSGCGGCDGLEQPIEYTHQAGL 456
           GSCW FS  G +E  + +KTG LV  S+  LV+CAK  C GCGG   +++ +EY  + G+
Sbjct: 132 GSCWTFSTTGSVEAAHFLKTGNLVSLSEQNLVDCAKDTCYGCGG-GWMDKALEYIEKGGI 190

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF--NGSETMKKILYKYGPLSVGLNS 514
            SEKDYPY    G    C +D SKV      +F Y   N  E +K  +   GP+SV +++
Sbjct: 191 MSEKDYPYE---GVDDNCRFDISKVAAKIS-NFTYIKKNDEEDLKNAVAAKGPISVAIDA 246

Query: 515 HLIHFYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
                   + I  + E  + +D L H VL+VGYG ++   YW+ +NSWG     +G+ ++
Sbjct: 247 SATFQLYVSGILDDTECSNEFDSLNHGVLVVGYGTENGKDYWIIKNSWGVNWGMDGYIRM 306

Query: 574 ERG-NNACGIEQIAGYATI 591
            R  NN CGI     Y  I
Sbjct: 307 SRNKNNQCGITTDGVYPNI 325



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 119/219 (54%), Gaps = 7/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P A+DWR K       DQ  CGSCW FS  G +E  + +KTG LV  S+  LV+CAK  
Sbjct: 110 LPSAFDWRDKGAVTEVKDQGMCGSCWTFSTTGSVEAAHFLKTGNLVSLSEQNLVDCAKDT 169

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG 128
           C GC G + + ++EY  + G+ SEKDYPY+   G    C +D SKV    +   ++  N 
Sbjct: 170 CYGCGGGWMDKALEYIEKGGIMSEKDYPYE---GVDDNCRFDISKVAAKISNFTYIKKND 226

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIP 187
            E +K  +   GP+SV +++        + I  + E  + +D L H VL+VGYG ++   
Sbjct: 227 EEDLKNAVAAKGPISVAIDASATFQLYVSGILDDTECSNEFDSLNHGVLVVGYGTENGKD 286

Query: 188 YWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           YW+++NSWG     +G+ ++ R  NN CGI     Y  I
Sbjct: 287 YWIIKNSWGVNWGMDGYIRMSRNKNNQCGITTDGVYPNI 325


>gi|426252094|ref|XP_004019753.1| PREDICTED: cathepsin F isoform 1 [Ovis aries]
          Length = 460

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 150/317 (47%), Gaps = 27/317 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F+    R Y + EE   R   F  +  +  +         +YG ++FSD + E
Sbjct: 159 MASIFKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTAQYGVTKFSDLTEE 218

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E   +T +         ++ D       L +   D P P  WDWR K       DQ  CG
Sbjct: 219 EF--RTIY------LNPLLKDAPGRNMRLAQPVTDVPPPQ-WDWRNKGAVTDVKDQGMCG 269

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +K G L+  S+ +L++C K    C G              GLE+
Sbjct: 270 SCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDKTDKACLGGLPSNAYSAIRTLGGLET 329

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY YR   G    C++   K K++           + +   L K GP+SV +N+  + 
Sbjct: 330 EDDYSYR---GHLQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKKGPISVAINAFGMQ 386

Query: 519 FYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
           FY      P+R     CSP+ + HAVLLVGYG +   P+W  +NSWG    +EG++ + R
Sbjct: 387 FYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSATPFWAIKNSWGTNWGEEGYYYLHR 443

Query: 576 GNNACGIEQIAGYATID 592
           G+ ACG+  +A  A I+
Sbjct: 444 GSGACGVNIMASSAVIN 460



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 154/319 (48%), Gaps = 32/319 (10%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F+    R Y + EE   R   F  +  +  +         +YG ++FSD + E
Sbjct: 159 MASIFKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTAQYGVTKFSDLTEE 218

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E   +T +         ++ D       L +   D P P  WDWR K       DQ  CG
Sbjct: 219 EF--RTIY------LNPLLKDAPGRNMRLAQPVTDVPPPQ-WDWRNKGAVTDVKDQGMCG 269

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGL 821
           SCWAFS+ G +EGQ+ +K G L+  S+ +L++C K    C G    PS  Y+      GL
Sbjct: 270 SCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDKTDKACLGGL--PSNAYSAIRTLGGL 327

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y+   G    C++   K K++           + +   L K GP+SV +N+  
Sbjct: 328 ETEDDYSYR---GHLQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKKGPISVAINAFG 384

Query: 882 IHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +  Y      P+R     CSP+ + HAVLLVGYG +   P+W ++NSWG    +EG++ +
Sbjct: 385 MQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSATPFWAIKNSWGTNWGEEGYYYL 441

Query: 939 ERGNNACGIEQIAGYATID 957
            RG+ ACG+  +A  A I+
Sbjct: 442 HRGSGACGVNIMASSAVIN 460



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 118/221 (53%), Gaps = 14/221 (6%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K   
Sbjct: 248 PPQWDWRNKGAVTDVKDQGMCGSCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDKTDK 307

Query: 72  GCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
            C G    PS  Y+      GLE+E DY Y+   G    C++   K K++          
Sbjct: 308 ACLGGL--PSNAYSAIRTLGGLETEDDYSYR---GHLQTCSFSAEKAKVYINDSVELSKN 362

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            + +   L K GP+SV +N+  +  Y      P+R     CSP+ + HAVLLVGYG +  
Sbjct: 363 EQKLAAWLAKKGPISVAINAFGMQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSA 419

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            P+W ++NSWG    +EG++ + RG+ ACG+  +A  A I+
Sbjct: 420 TPFWAIKNSWGTNWGEEGYYYLHRGSGACGVNIMASSAVIN 460



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +   P+W ++NSWG    +EG++ + RG+ ACG+  +A  A I
Sbjct: 400  CSPWLIDHAVLLVGYGNRSATPFWAIKNSWGTNWGEEGYYYLHRGSGACGVNIMASSAVI 459

Query: 1025 D 1025
            +
Sbjct: 460  N 460


>gi|457756|emb|CAA82995.1| cysteine proteinase [Vicia sativa]
          Length = 358

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 161/332 (48%), Gaps = 45/332 (13%)

Query: 650 DNE-----NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTS 696
           DNE     N    F +F  K  + YA  EE   RF  FK +    K H++      +G +
Sbjct: 30  DNEEDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKANLIKAKLHQKLDPTAEHGIT 89

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
           +FSD +  E   +     ++R   R+ A  +K       +     +P+ +DWR+K    P
Sbjct: 90  KFSDLTASEFR-RQFLGLNKRL--RLPAHAQKAP-----ILPTTNLPEDFDWREKGAVTP 141

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGC 807
             DQ +CGSCWAFS  G LEG + + TGKLV  S+ QLV+C   C         SGC+G 
Sbjct: 142 VKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEEAGSCDSGCNGG 201

Query: 808 FFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI 866
               + EY  Q+ G+  EKDY Y   +G    C +DKSKV        +     E +   
Sbjct: 202 LMNNAFEYLLQSGGVVQEKDYAYTGRDGS---CKFDKSKVVASVSNFSVVSLDEEQIAAN 258

Query: 867 LYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYGK-------QDNIP 918
           L K GPL+V +N+  +  Y +G         C+   L H VLLVG+GK           P
Sbjct: 259 LVKNGPLAVAINAAWMQAYMSGVSC---PYVCAKARLDHGVLLVGFGKGAYAPIRLKEKP 315

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           YW+++NSWG    ++G++KI RG N CG++ +
Sbjct: 316 YWIIKNSWGQNWGEQGYYKICRGRNVCGVDSM 347



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 161/332 (48%), Gaps = 44/332 (13%)

Query: 284 DNE-----NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTS 330
           DNE     N    F +F  K  + YA  EE   RF  FK +    K H++      +G +
Sbjct: 30  DNEEDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKANLIKAKLHQKLDPTAEHGIT 89

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
           +FSD +  E   +     ++R   R+ A  +K       +     +P+ +DWR+K    P
Sbjct: 90  KFSDLTASEFR-RQFLGLNKRL--RLPAHAQKAP-----ILPTTNLPEDFDWREKGAVTP 141

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG- 443
             DQ +CGSCWAFS  G LEG + + TGKLV  S+ QLV+C   C      S   GC+G 
Sbjct: 142 VKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEEAGSCDSGCNGG 201

Query: 444 -LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKI 501
            +    EY  Q+ G+  EKDY Y   +G    C +DKSKV        +     E +   
Sbjct: 202 LMNNAFEYLLQSGGVVQEKDYAYTGRDGS---CKFDKSKVVASVSNFSVVSLDEEQIAAN 258

Query: 502 LYKYGPLSVGLNSHLIHFY-NGTPIRKNDETCSPYDLGHAVLLVGYGK-------QDDIP 553
           L K GPL+V +N+  +  Y +G         C+   L H VLLVG+GK         + P
Sbjct: 259 LVKNGPLAVAINAAWMQAYMSGVSC---PYVCAKARLDHGVLLVGFGKGAYAPIRLKEKP 315

Query: 554 YWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           YW+ +NSWG    ++G++KI RG N CG++ +
Sbjct: 316 YWIIKNSWGQNWGEQGYYKICRGRNVCGVDSM 347



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 119/227 (52%), Gaps = 24/227 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K    P  DQ  CGSCWAFS  G LEG + + TGKLV  S+ QLV+C   C
Sbjct: 127 LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVC 186

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  Q+ G+  EKDY Y   +G    C +DKSKV     
Sbjct: 187 DPEEAGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRDGS---CKFDKSKVVASVS 243

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVG 179
              +     E +   L K GPL+V +N+  +  Y +G         C+   L H VLLVG
Sbjct: 244 NFSVVSLDEEQIAANLVKNGPLAVAINAAWMQAYMSGVSC---PYVCAKARLDHGVLLVG 300

Query: 180 YGK-------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           +GK           PYW+++NSWG    ++G++KI RG N CG++ +
Sbjct: 301 FGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSM 347



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGK-------QDDIPYWLV 990
            ++ G  A  I      A +  V     C+   L H VLLVG+GK         + PYW++
Sbjct: 260  VKNGPLAVAINAAWMQAYMSGVSCPYVCAKARLDHGVLLVGFGKGAYAPIRLKEKPYWII 319

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    ++G++KI RG N CG++ +
Sbjct: 320  KNSWGQNWGEQGYYKICRGRNVCGVDSM 347


>gi|15705865|gb|AAL05851.1|AF411121_1 cysteine proteinase precursor [Sandersonia aurantiaca]
          Length = 360

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 160/346 (46%), Gaps = 61/346 (17%)

Query: 643 IEGSLTFDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER----- 692
           I   ++ D + +L     F +F+ + G+ YA++ E   RF  FK +  +  +H+R     
Sbjct: 27  IRQVVSDDQQQLLSAEAHFSSFLSRYGKSYADEAEHAYRFSVFKSNLRRARRHQRLDPTA 86

Query: 693 -YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDA 745
            +G + F+D +P E           RTY  +     +          D P+      P  
Sbjct: 87  VHGVTRFADLTPSEF---------RRTYLGL-----RRRPRTAGSTHDAPILPTNELPAD 132

Query: 746 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---- 801
           +DWR      P  +Q +CGSCW+FS AG LEG   + TG LV  S+ QLV+C  +C    
Sbjct: 133 FDWRDHGAVTPVKNQGSCGSCWSFSAAGALEGANYLSTGNLVSLSEQQLVDCDHECDSSE 192

Query: 802 -----SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
                 GC+G     + EY  ++ GLE E DYPY     ++  C ++K+K+        +
Sbjct: 193 PDSCDQGCNGGLMTTAFEYILKSGGLEREADYPYTGT--DRGTCKFNKAKISAVASNFSV 250

Query: 856 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGY 911
                + +   L K+GPL+V +N+  +  Y G           PY     L H VLLVGY
Sbjct: 251 VSIDEDQIAANLVKHGPLAVGINAVFMQTYVGG-------VSCPYICGKHLDHGVLLVGY 303

Query: 912 GKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           G            PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 GSAGFAPIRFKEKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 349



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 161/346 (46%), Gaps = 60/346 (17%)

Query: 277 IEGSLTFDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER----- 326
           I   ++ D + +L     F +F+ + G+ YA++ E   RF  FK +  +  +H+R     
Sbjct: 27  IRQVVSDDQQQLLSAEAHFSSFLSRYGKSYADEAEHAYRFSVFKSNLRRARRHQRLDPTA 86

Query: 327 -YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDA 379
            +G + F+D +P E           RTY  +     +          D P+      P  
Sbjct: 87  VHGVTRFADLTPSEF---------RRTYLGL-----RRRPRTAGSTHDAPILPTNELPAD 132

Query: 380 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC- 438
           +DWR      P  +Q +CGSCW+FS AG LEG   + TG LV  S+ QLV+C  +C    
Sbjct: 133 FDWRDHGAVTPVKNQGSCGSCWSFSAAGALEGANYLSTGNLVSLSEQQLVDCDHECDSSE 192

Query: 439 -----GGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFL 490
                 GC+G  +    EY  ++ GLE E DYPY     ++  C ++K+K+        +
Sbjct: 193 PDSCDQGCNGGLMTTAFEYILKSGGLEREADYPYT--GTDRGTCKFNKAKISAVASNFSV 250

Query: 491 YFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGY 546
                + +   L K+GPL+VG+N+  +  Y G           PY     L H VLLVGY
Sbjct: 251 VSIDEDQIAANLVKHGPLAVGINAVFMQTYVGG-------VSCPYICGKHLDHGVLLVGY 303

Query: 547 GKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           G          + PYW+ +NSWG    + G++KI RG N CG++ +
Sbjct: 304 GSAGFAPIRFKEKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 349



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 114/230 (49%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR      P  +Q  CGSCW+FS AG LEG   + TG LV  S+ QLV+C  +C
Sbjct: 129 LPADFDWRDHGAVTPVKNQGSCGSCWSFSAAGALEGANYLSTGNLVSLSEQQLVDCDHEC 188

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                     GC+G     + EY  ++ GLE E DYPY     ++  C ++K+K+     
Sbjct: 189 DSSEPDSCDQGCNGGLMTTAFEYILKSGGLEREADYPYTGT--DRGTCKFNKAKISAVAS 246

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K+GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 247 NFSVVSIDEDQIAANLVKHGPLAVGINAVFMQTYVGG-------VSCPYICGKHLDHGVL 299

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG            PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 300 LVGYGSAGFAPIRFKEKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 349



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLV 990
            ++ G  A GI  +     +  V     C  + L H VLLVGYG          + PYW++
Sbjct: 263  VKHGPLAVGINAVFMQTYVGGVSCPYICGKH-LDHGVLLVGYGSAGFAPIRFKEKPYWII 321

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    + G++KI RG N CG++ +
Sbjct: 322  KNSWGENWGENGYYKICRGRNVCGVDSM 349


>gi|302771610|ref|XP_002969223.1| hypothetical protein SELMODRAFT_91274 [Selaginella moellendorffii]
 gi|300162699|gb|EFJ29311.1| hypothetical protein SELMODRAFT_91274 [Selaginella moellendorffii]
          Length = 367

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 175/354 (49%), Gaps = 53/354 (14%)

Query: 626 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 685
           +TD   D+   R+D  A +  L  +       FK+FI + G+ YA  E    R + F+ +
Sbjct: 33  VTDTARDESNGRLD--AAKALLDVETH-----FKSFIARFGKAYATAEAYAHRLKVFEAN 85

Query: 686 -----GHKKHER---YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 737
                 H+  +    +G ++FSD + EE   K  F    R   R+   RE  +  ++   
Sbjct: 86  LVRAVSHQALDPSAVHGITQFSDLTEEEF--KQQF-LGLRVPSRL---REANKAPVLPTN 139

Query: 738 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 797
               +P+ +DWR+        +Q ACGSCWAFS  G +EG + ++TGKL+  S+ QLV+C
Sbjct: 140 D---LPEDFDWREHGAVTEVKNQGACGSCWAFSTTGAIEGAHFLETGKLISLSEQQLVDC 196

Query: 798 AKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYK-NANGEKFKCAYDKSKV 846
              C         +GC+G     + +Y  ++ GLE+E DYPY  N+NG   KC ++ +K+
Sbjct: 197 DHSCDPTDKVSCDAGCNGGLMTNAYDYVMKSGGLETETDYPYTGNSNG---KCQFNANKI 253

Query: 847 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLG 903
                         + +   L K+GPL++ +N+  +  Y G    PI      CS + + 
Sbjct: 254 VASVANFSTVSLDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPI-----ICSKHHID 308

Query: 904 HAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           H VLLVGYG +          PYW+++NSWG    ++G++KI RG+  CG+  +
Sbjct: 309 HGVLLVGYGAKGYAPIRFTEKPYWIIKNSWGATWGEQGYYKICRGHGMCGMNTM 362



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 175/354 (49%), Gaps = 52/354 (14%)

Query: 260 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 319
           +TD   D+   R+D  A +  L  +       FK+FI + G+ YA  E    R + F+ +
Sbjct: 33  VTDTARDESNGRLD--AAKALLDVETH-----FKSFIARFGKAYATAEAYAHRLKVFEAN 85

Query: 320 -----GHKKHER---YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 371
                 H+  +    +G ++FSD + EE   K  F    R   R+   RE  +  ++   
Sbjct: 86  LVRAVSHQALDPSAVHGITQFSDLTEEEF--KQQF-LGLRVPSRL---REANKAPVLPTN 139

Query: 372 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 431
               +P+ +DWR+        +Q ACGSCWAFS  G +EG + ++TGKL+  S+ QLV+C
Sbjct: 140 D---LPEDFDWREHGAVTEVKNQGACGSCWAFSTTGAIEGAHFLETGKLISLSEQQLVDC 196

Query: 432 AKQC------SGCGGCDG--LEQPIEYTHQA-GLESEKDYPYR-NGNGEKFKCAYDKSKV 481
              C      S   GC+G  +    +Y  ++ GLE+E DYPY  N NG   KC ++ +K+
Sbjct: 197 DHSCDPTDKVSCDAGCNGGLMTNAYDYVMKSGGLETETDYPYTGNSNG---KCQFNANKI 253

Query: 482 KLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG---TPIRKNDETCSPYDLG 538
                         + +   L K+GPL++G+N+  +  Y G    PI      CS + + 
Sbjct: 254 VASVANFSTVSLDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPI-----ICSKHHID 308

Query: 539 HAVLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           H VLLVGYG +        + PYW+ +NSWG    ++G++KI RG+  CG+  +
Sbjct: 309 HGVLLVGYGAKGYAPIRFTEKPYWIIKNSWGATWGEQGYYKICRGHGMCGMNTM 362



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 123/230 (53%), Gaps = 29/230 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+        +Q  CGSCWAFS  G +EG + ++TGKL+  S+ QLV+C   C
Sbjct: 141 LPEDFDWREHGAVTEVKNQGACGSCWAFSTTGAIEGAHFLETGKLISLSEQQLVDCDHSC 200

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYK-NANGEKFKCAYDKSKVKLFT 119
                    +GC+G     + +Y  ++ GLE+E DYPY  N+NG   KC ++ +K+    
Sbjct: 201 DPTDKVSCDAGCNGGLMTNAYDYVMKSGGLETETDYPYTGNSNG---KCQFNANKIVASV 257

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 176
                     + +   L K+GPL++ +N+  +  Y G    PI      CS + + H VL
Sbjct: 258 ANFSTVSLDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPI-----ICSKHHIDHGVL 312

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG +          PYW+++NSWG    ++G++KI RG+  CG+  +
Sbjct: 313 LVGYGAKGYAPIRFTEKPYWIIKNSWGATWGEQGYYKICRGHGMCGMNTM 362


>gi|348513249|ref|XP_003444155.1| PREDICTED: cathepsin K-like [Oreochromis niloticus]
          Length = 330

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/313 (35%), Positives = 148/313 (47%), Gaps = 32/313 (10%)

Query: 663 VKRGRQYANDEEIKERFEYFKQDGH------------KKHERYGTSEFSDRSPEEILCKT 710
            K G+ Y N  EI  R   ++++ H            K     G +  +D + EEI  K 
Sbjct: 31  TKHGKVYDNQTEIDFRRAVWEKNVHLVLRHNQEASAGKHSFTLGLNHLADMTAEEINEKL 90

Query: 711 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 770
                E T        E V         D P+P   DWRK+ + GP  +Q  CGSCWAFS
Sbjct: 91  NGLKLEETVNFTNGTFEDVS--------DSPLPVNVDWRKEGLVGPVRNQGLCGSCWAFS 142

Query: 771 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDY 827
             G LEGQ   +TG LV  S   LV+C+ Q    GC G +   +  Y     G++SE  Y
Sbjct: 143 SLGALEGQLKKRTGTLVSLSPQNLVDCSTQDGNLGCRGGYITKAYSYVIRNGGVDSESFY 202

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM-KKILYKYGPLSVLLNSDL--IHD 884
           PY++ NG   KC Y       +  K  +   G E M +K+L   GP+SV +N+ L   H 
Sbjct: 203 PYEHKNG---KCRYSVQGRAGYCSKFSILPEGDEKMLQKVLASVGPISVAVNAMLESFHM 259

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NN 943
           Y+G     N  +C+P  + HAVLLVGYG      YWLV+NSWG    + G+ ++ R  NN
Sbjct: 260 YSGG--LYNVPSCNPKLINHAVLLVGYGTDAGQDYWLVKNSWGTAWGEGGYIRLARNKNN 317

Query: 944 ACGIEQIAGYATI 956
            CGI     Y T+
Sbjct: 318 LCGIASFPVYPTV 330



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 146/312 (46%), Gaps = 29/312 (9%)

Query: 297 VKRGRQYANDEEIKERFEYFKQDGH------------KKHERYGTSEFSDRSPEEILCKT 344
            K G+ Y N  EI  R   ++++ H            K     G +  +D + EEI  K 
Sbjct: 31  TKHGKVYDNQTEIDFRRAVWEKNVHLVLRHNQEASAGKHSFTLGLNHLADMTAEEINEKL 90

Query: 345 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 404
                E T        E V         D P+P   DWRK+ + GP  +Q  CGSCWAFS
Sbjct: 91  NGLKLEETVNFTNGTFEDVS--------DSPLPVNVDWRKEGLVGPVRNQGLCGSCWAFS 142

Query: 405 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH---QAGLESEKD 461
             G LEGQ   +TG LV  S   LV+C+ Q  G  GC G      Y++     G++SE  
Sbjct: 143 SLGALEGQLKKRTGTLVSLSPQNLVDCSTQ-DGNLGCRGGYITKAYSYVIRNGGVDSESF 201

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETM-KKILYKYGPLSVGLNSHLIHFY 520
           YPY + NG   KC Y       +  K  +   G E M +K+L   GP+SV +N+ L  F+
Sbjct: 202 YPYEHKNG---KCRYSVQGRAGYCSKFSILPEGDEKMLQKVLASVGPISVAVNAMLESFH 258

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNA 579
             +    N  +C+P  + HAVLLVGYG      YWL +NSWG    + G+ ++ R  NN 
Sbjct: 259 MYSGGLYNVPSCNPKLINHAVLLVGYGTDAGQDYWLVKNSWGTAWGEGGYIRLARNKNNL 318

Query: 580 CGIEQIAGYATI 591
           CGI     Y T+
Sbjct: 319 CGIASFPVYPTV 330



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/225 (40%), Positives = 121/225 (53%), Gaps = 12/225 (5%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D P+P   DWRK+ + GP  +Q  CGSCWAFS  G LEGQ   +TG LV  S   LV+C+
Sbjct: 111 DSPLPVNVDWRKEGLVGPVRNQGLCGSCWAFSSLGALEGQLKKRTGTLVSLSPQNLVDCS 170

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
            Q    GC G +   +  Y     G++SE  YPY++ NG   KC Y       +  K  +
Sbjct: 171 TQDGNLGCRGGYITKAYSYVIRNGGVDSESFYPYEHKNG---KCRYSVQGRAGYCSKFSI 227

Query: 125 HFNGSETM-KKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
              G E M +K+L   GP+SV +N+ L   H Y+G     N  +C+P  + HAVLLVGYG
Sbjct: 228 LPEGDEKMLQKVLASVGPISVAVNAMLESFHMYSGG--LYNVPSCNPKLINHAVLLVGYG 285

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
                 YWLV+NSWG    + G+ ++ R  NN CGI     Y T+
Sbjct: 286 TDAGQDYWLVKNSWGTAWGEGGYIRLARNKNNLCGIASFPVYPTV 330



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 961  NDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 1019
            N  +C+P  + HAVLLVGYG      YWLV+NSWG    + G+ ++ R  NN CGI    
Sbjct: 266  NVPSCNPKLINHAVLLVGYGTDAGQDYWLVKNSWGTAWGEGGYIRLARNKNNLCGIASFP 325

Query: 1020 GYATI 1024
             Y T+
Sbjct: 326  VYPTV 330


>gi|426252096|ref|XP_004019754.1| PREDICTED: cathepsin F isoform 2 [Ovis aries]
          Length = 477

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 149/319 (46%), Gaps = 31/319 (9%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F+    R Y + EE   R   F  +  +  +         +YG ++FSD + E
Sbjct: 176 MASIFKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTAQYGVTKFSDLTEE 235

Query: 339 EILCKTGFKWSERT--YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
           E           RT     ++ D       L +   D P P  WDWR K       DQ  
Sbjct: 236 EF----------RTIYLNPLLKDAPGRNMRLAQPVTDVPPPQ-WDWRNKGAVTDVKDQGM 284

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGL 456
           CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K    C G              GL
Sbjct: 285 CGSCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDKTDKACLGGLPSNAYSAIRTLGGL 344

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL 516
           E+E DY YR   G    C++   K K++           + +   L K GP+SV +N+  
Sbjct: 345 ETEDDYSYR---GHLQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKKGPISVAINAFG 401

Query: 517 IHFYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           + FY      P+R     CSP+ + HAVLLVGYG +   P+W  +NSWG    +EG++ +
Sbjct: 402 MQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSATPFWAIKNSWGTNWGEEGYYYL 458

Query: 574 ERGNNACGIEQIAGYATID 592
            RG+ ACG+  +A  A I+
Sbjct: 459 HRGSGACGVNIMASSAVIN 477



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 153/321 (47%), Gaps = 36/321 (11%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F+    R Y + EE   R   F  +  +  +         +YG ++FSD + E
Sbjct: 176 MASIFKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTAQYGVTKFSDLTEE 235

Query: 705 EILCKTGFKWSERT--YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
           E           RT     ++ D       L +   D P P  WDWR K       DQ  
Sbjct: 236 EF----------RTIYLNPLLKDAPGRNMRLAQPVTDVPPPQ-WDWRNKGAVTDVKDQGM 284

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QA 819
           CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K    C G    PS  Y+      
Sbjct: 285 CGSCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDKTDKACLGGL--PSNAYSAIRTLG 342

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GLE+E DY Y+   G    C++   K K++           + +   L K GP+SV +N+
Sbjct: 343 GLETEDDYSYR---GHLQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKKGPISVAINA 399

Query: 880 DLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFF 936
             +  Y      P+R     CSP+ + HAVLLVGYG +   P+W ++NSWG    +EG++
Sbjct: 400 FGMQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSATPFWAIKNSWGTNWGEEGYY 456

Query: 937 KIERGNNACGIEQIAGYATID 957
            + RG+ ACG+  +A  A I+
Sbjct: 457 YLHRGSGACGVNIMASSAVIN 477



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 118/221 (53%), Gaps = 14/221 (6%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K   
Sbjct: 265 PPQWDWRNKGAVTDVKDQGMCGSCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDKTDK 324

Query: 72  GCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
            C G    PS  Y+      GLE+E DY Y+   G    C++   K K++          
Sbjct: 325 ACLGGL--PSNAYSAIRTLGGLETEDDYSYR---GHLQTCSFSAEKAKVYINDSVELSKN 379

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            + +   L K GP+SV +N+  +  Y      P+R     CSP+ + HAVLLVGYG +  
Sbjct: 380 EQKLAAWLAKKGPISVAINAFGMQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSA 436

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            P+W ++NSWG    +EG++ + RG+ ACG+  +A  A I+
Sbjct: 437 TPFWAIKNSWGTNWGEEGYYYLHRGSGACGVNIMASSAVIN 477



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +   P+W ++NSWG    +EG++ + RG+ ACG+  +A  A I
Sbjct: 417  CSPWLIDHAVLLVGYGNRSATPFWAIKNSWGTNWGEEGYYYLHRGSGACGVNIMASSAVI 476

Query: 1025 D 1025
            +
Sbjct: 477  N 477


>gi|149392541|gb|ABR26073.1| oryzain gamma chain precursor [Oryza sativa Indica Group]
          Length = 367

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 156/343 (45%), Gaps = 34/343 (9%)

Query: 630 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 689
           +TDQ  + +++  I  +L    + +   F  F V+ G++Y +  E++ RF  F +     
Sbjct: 42  VTDQAASALESTVI-AALGRTRDAL--RFARFAVRHGKRYGDAAEVQRRFRIFSESLELV 98

Query: 690 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKML--MEVEKD 739
                     R G + F+D S           W E    R+ A +     +     +   
Sbjct: 99  RSTNRRGLPYRLGINRFADMS-----------WEEFQASRLGAAQNCSATLAGNHRMRDA 147

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
             +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA 
Sbjct: 148 AALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCAT 207

Query: 800 QCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDF 854
             +  GC G     + EY  +  GL++E+ YPY   NG    C Y  +   VK+    + 
Sbjct: 208 AYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENVGVKVLDSVN- 263

Query: 855 LHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 913
           +     + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG 
Sbjct: 264 ITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGV 323

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           ++ +PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 324 ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 366



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 155/343 (45%), Gaps = 33/343 (9%)

Query: 264 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 323
           +TDQ  + +++  I  +L    + +   F  F V+ G++Y +  E++ RF  F +     
Sbjct: 42  VTDQAASALESTVI-AALGRTRDAL--RFARFAVRHGKRYGDAAEVQRRFRIFSESLELV 98

Query: 324 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKML--MEVEKD 373
                     R G + F+D S           W E    R+ A +     +     +   
Sbjct: 99  RSTNRRGLPYRLGINRFADMS-----------WEEFQASRLGAAQNCSATLAGNHRMRDA 147

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
             +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA 
Sbjct: 148 AALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCAT 207

Query: 434 QCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAY--DKSKVKLFTGKDF 489
             +  G   GL  Q  EY  +  GL++E+ YPY   NG    C Y  +   VK+    + 
Sbjct: 208 AYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENVGVKVLDSVN- 263

Query: 490 LYFNGSETMKKILYKYGPLSVGLNS-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
           +     + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG 
Sbjct: 264 ITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGV 323

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           ++ +PYWL +NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 324 ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 366



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 112/221 (50%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA   
Sbjct: 150 LPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAY 209

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLH 125
           +  GC G     + EY  +  GL++E+ YPY   NG    C Y  +   VK+    + + 
Sbjct: 210 NNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENVGVKVLDSVN-IT 265

Query: 126 FNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
               + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG ++
Sbjct: 266 LGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVEN 325

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 326 GVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 366



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 40/59 (67%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            SP D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 308  SPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 366


>gi|1401242|gb|AAB67878.1| pre-pro-cysteine proteinase [Vicia faba]
          Length = 363

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 173/381 (45%), Gaps = 70/381 (18%)

Query: 607 LIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNE-----NILETFKAF 661
            I A+ L   VA+     S  +  TD  + R            DNE     N    F +F
Sbjct: 5   FIFAIVLFAAVAT----SSTDNTNTDDFIIR---------QVVDNEEDHLLNAEHHFTSF 51

Query: 662 IVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCKTGFK 713
             K  + Y+  EE   RF  FK +    K H++      +G ++FSD +  E        
Sbjct: 52  KSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASE-------- 103

Query: 714 WSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAGDQAACGSCW 767
                + R     +K  ++    +K  P+      P+ +DWR+K    P  DQ +CGSCW
Sbjct: 104 -----FRRQFLGLKKRLRLPAHAQK-APILPTTNLPEDFDWREKGAVTPVKDQGSCGSCW 157

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQ 818
           AFS  G LEG + + TGKLV  S+ QLV+C   C         SGC+G     + EY  Q
Sbjct: 158 AFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLQ 217

Query: 819 A-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
           + G+  EKDY Y   +G    C +DKSKV        +     E +   L K GPL+V +
Sbjct: 218 SGGVVQEKDYAYTGRDGS---CKFDKSKVVASVSNFSVVSLDEEQIAANLVKNGPLAVGI 274

Query: 878 NSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYGK-------QDNIPYWLVRNSWGPI 929
           N+  +  Y +G         C+   L H VLLVG+GK           PYW+V+NSWG  
Sbjct: 275 NAAWMQTYMSGVSC---PYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIVKNSWGQN 331

Query: 930 GPDEGFFKIERGNNACGIEQI 950
             ++G++KI RG N CG++ +
Sbjct: 332 WGEQGYYKICRGRNVCGVDSM 352



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 174/381 (45%), Gaps = 69/381 (18%)

Query: 241 LIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNE-----NILETFKAF 295
            I A+ L   VA+     S  +  TD  + R            DNE     N    F +F
Sbjct: 5   FIFAIVLFAAVAT----SSTDNTNTDDFIIR---------QVVDNEEDHLLNAEHHFTSF 51

Query: 296 IVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCKTGFK 347
             K  + Y+  EE   RF  FK +    K H++      +G ++FSD +  E        
Sbjct: 52  KSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASE-------- 103

Query: 348 WSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAGDQAACGSCW 401
                + R     +K  ++    +K  P+      P+ +DWR+K    P  DQ +CGSCW
Sbjct: 104 -----FRRQFLGLKKRLRLPAHAQK-APILPTTNLPEDFDWREKGAVTPVKDQGSCGSCW 157

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQ 453
           AFS  G LEG + + TGKLV  S+ QLV+C   C      S   GC+G  +    EY  Q
Sbjct: 158 AFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLQ 217

Query: 454 A-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
           + G+  EKDY Y   +G    C +DKSKV        +     E +   L K GPL+VG+
Sbjct: 218 SGGVVQEKDYAYTGRDGS---CKFDKSKVVASVSNFSVVSLDEEQIAANLVKNGPLAVGI 274

Query: 513 NSHLIHFY-NGTPIRKNDETCSPYDLGHAVLLVGYGK-------QDDIPYWLARNSWGPI 564
           N+  +  Y +G         C+   L H VLLVG+GK         + PYW+ +NSWG  
Sbjct: 275 NAAWMQTYMSGVSC---PYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIVKNSWGQN 331

Query: 565 GPDEGFFKIERGNNACGIEQI 585
             ++G++KI RG N CG++ +
Sbjct: 332 WGEQGYYKICRGRNVCGVDSM 352



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 119/227 (52%), Gaps = 24/227 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K    P  DQ  CGSCWAFS  G LEG + + TGKLV  S+ QLV+C   C
Sbjct: 132 LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVC 191

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  Q+ G+  EKDY Y   +G    C +DKSKV     
Sbjct: 192 DPEQAGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRDGS---CKFDKSKVVASVS 248

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVG 179
              +     E +   L K GPL+V +N+  +  Y +G         C+   L H VLLVG
Sbjct: 249 NFSVVSLDEEQIAANLVKNGPLAVGINAAWMQTYMSGVSC---PYVCAKSRLDHGVLLVG 305

Query: 180 YGK-------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           +GK           PYW+V+NSWG    ++G++KI RG N CG++ +
Sbjct: 306 FGKGAYAPIRLKEKPYWIVKNSWGQNWGEQGYYKICRGRNVCGVDSM 352



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGK-------QDDIPYWLV 990
            ++ G  A GI        +  V     C+   L H VLLVG+GK         + PYW+V
Sbjct: 265  VKNGPLAVGINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIV 324

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    ++G++KI RG N CG++ +
Sbjct: 325  KNSWGQNWGEQGYYKICRGRNVCGVDSM 352


>gi|218202220|gb|EEC84647.1| hypothetical protein OsI_31538 [Oryza sativa Indica Group]
          Length = 363

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 156/343 (45%), Gaps = 34/343 (9%)

Query: 630 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 689
           +TDQ  + +++  I  +L    + +   F  F V+ G++Y +  E++ RF  F +     
Sbjct: 38  VTDQAASALESTVI-AALGRTRDAL--RFARFAVRHGKRYGDAAEVQRRFRIFSESLELV 94

Query: 690 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKML--MEVEKD 739
                     R G + F+D S           W E    R+ A +     +     +   
Sbjct: 95  RSTNRRGLPYRLGINRFADMS-----------WEEFQASRLGAAQNCSATLAGNHRMRDA 143

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
             +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA 
Sbjct: 144 AALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCAT 203

Query: 800 QCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDF 854
             +  GC G     + EY  +  GL++E+ YPY   NG    C Y  +   VK+    + 
Sbjct: 204 AYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENVGVKVLDSVN- 259

Query: 855 LHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 913
           +     + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG 
Sbjct: 260 ITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGV 319

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           ++ +PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 320 ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 362



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 155/343 (45%), Gaps = 33/343 (9%)

Query: 264 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 323
           +TDQ  + +++  I  +L    + +   F  F V+ G++Y +  E++ RF  F +     
Sbjct: 38  VTDQAASALESTVI-AALGRTRDAL--RFARFAVRHGKRYGDAAEVQRRFRIFSESLELV 94

Query: 324 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKML--MEVEKD 373
                     R G + F+D S           W E    R+ A +     +     +   
Sbjct: 95  RSTNRRGLPYRLGINRFADMS-----------WEEFQASRLGAAQNCSATLAGNHRMRDA 143

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
             +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA 
Sbjct: 144 AALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCAT 203

Query: 434 QCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAY--DKSKVKLFTGKDF 489
             +  G   GL  Q  EY  +  GL++E+ YPY   NG    C Y  +   VK+    + 
Sbjct: 204 AYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENVGVKVLDSVN- 259

Query: 490 LYFNGSETMKKILYKYGPLSVGLNS-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
           +     + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG 
Sbjct: 260 ITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGV 319

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           ++ +PYWL +NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 320 ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 362



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 112/221 (50%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA   
Sbjct: 146 LPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAY 205

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLH 125
           +  GC G     + EY  +  GL++E+ YPY   NG    C Y  +   VK+    + + 
Sbjct: 206 NNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENVGVKVLDSVN-IT 261

Query: 126 FNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
               + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG ++
Sbjct: 262 LGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVEN 321

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 322 GVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 362



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 40/59 (67%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            SP D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 304  SPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 362


>gi|6851030|emb|CAB71032.1| cysteine protease [Lolium multiflorum]
          Length = 359

 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 147/309 (47%), Gaps = 25/309 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTS------EFSDRSPEEILCK 709
           F  F V+ G+ Y +  E++ RF  F +  D  +   R G S       FSD + EE    
Sbjct: 58  FARFAVRHGKSYGSAAEVQRRFRIFSESLDEVRSTNRKGLSYKLGINRFSDMTWEE---- 113

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+ ++    +  +       ++ +      +P+  DWR+  +  P  DQA+CGSCW F
Sbjct: 114 --FQATKLGAAQTCSATLAGNHLMRDAN---ALPETKDWRETGIVSPVKDQASCGSCWTF 168

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKD 826
           S  G LE  Y   TGK +  S+ QLV+CA   +  GC+G     + EY  +  G+++E+ 
Sbjct: 169 STTGALEAAYTQATGKNISLSEQQLVDCAGAYNNFGCNGGLPSQAFEYIKYNGGIDTEES 228

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNS-DLIHD 884
           YPYK  NG    C Y      +       +  N  + +K  +    P+SV     D    
Sbjct: 229 YPYKGVNG---VCKYRPENAAVQVADSVNITLNAEDELKNAVGLVRPVSVAFEVIDGFKQ 285

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y       +    +P D+ HAVL VGYG ++ +PYWL++NSWG    ++G+FK+E G N 
Sbjct: 286 YKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGEDGYFKMEMGKNM 345

Query: 945 CGIEQIAGY 953
           C +   A Y
Sbjct: 346 CAVATCASY 354



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 147/310 (47%), Gaps = 26/310 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTS------EFSDRSPEEILCK 343
           F  F V+ G+ Y +  E++ RF  F +  D  +   R G S       FSD + EE    
Sbjct: 58  FARFAVRHGKSYGSAAEVQRRFRIFSESLDEVRSTNRKGLSYKLGINRFSDMTWEE---- 113

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+ ++    +  +       ++ +      +P+  DWR+  +  P  DQA+CGSCW F
Sbjct: 114 --FQATKLGAAQTCSATLAGNHLMRDAN---ALPETKDWRETGIVSPVKDQASCGSCWTF 168

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKD 461
           S  G LE  Y   TGK +  S+ QLV+CA   +  G   GL  Q  EY  +  G+++E+ 
Sbjct: 169 STTGALEAAYTQATGKNISLSEQQLVDCAGAYNNFGCNGGLPSQAFEYIKYNGGIDTEES 228

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN--SHLIH 518
           YPY+  NG    C Y      +       +  N  + +K  +    P+SV          
Sbjct: 229 YPYKGVNG---VCKYRPENAAVQVADSVNITLNAEDELKNAVGLVRPVSVAFEVIDGFKQ 285

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           + +G     +  T +P D+ HAVL VGYG ++ +PYWL +NSWG    ++G+FK+E G N
Sbjct: 286 YKSGVYTSDHCGT-TPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGEDGYFKMEMGKN 344

Query: 579 ACGIEQIAGY 588
            C +   A Y
Sbjct: 345 MCAVATCASY 354



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 111/217 (51%), Gaps = 8/217 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  DQA CGSCW FS  G LE  Y   TGK +  S+ QLV+CA   
Sbjct: 141 LPETKDWRETGIVSPVKDQASCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGAY 200

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
           +  GC+G     + EY  +  G+++E+ YPYK  NG    C Y      +       +  
Sbjct: 201 NNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNG---VCKYRPENAAVQVADSVNITL 257

Query: 127 NGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           N  + +K  +    P+SV     D    Y       +    +P D+ HAVL VGYG ++ 
Sbjct: 258 NAEDELKNAVGLVRPVSVAFEVIDGFKQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENG 317

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           +PYWL++NSWG    ++G+FK+E G N C +   A Y
Sbjct: 318 VPYWLIKNSWGADWGEDGYFKMEMGKNMCAVATCASY 354



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P D+ HAVL VGYG ++ +PYWL++NSWG    ++G+FK+E G N C +   A Y
Sbjct: 299  TPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGEDGYFKMEMGKNMCAVATCASY 354


>gi|405971604|gb|EKC36431.1| Cathepsin L [Crassostrea gigas]
          Length = 384

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/321 (34%), Positives = 159/321 (49%), Gaps = 34/321 (10%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDRSP 703
           + +K F +   + Y + EE   RFE F+++  +  KH +           G ++F+D   
Sbjct: 77  QAWKEFKILHDKSYEDHEEESRRFEIFRENVLRIEKHNKLFHLGKKSYYLGVNQFTDLEY 136

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
            E +   G K +         +  K    L     +  VPD+ DWR K       +Q AC
Sbjct: 137 AEFVNFNGLKMTN-------LNNTKCSSHLSA--NNIVVPDSVDWRSKGYVTKVKNQGAC 187

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQA-G 820
           GSCWAFS  G LEGQY  K GKLV  S+SQLV+C+      GC+G F E + +Y     G
Sbjct: 188 GSCWAFSATGSLEGQYFRKNGKLVPLSESQLVDCSGSFGNEGCNGGFMENAFKYVKSVGG 247

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNS 879
           +ESE DYPYK     +  CA+DK+KV           +GSE ++K+++ + GP+SV +++
Sbjct: 248 IESESDYPYK---ARQRTCAFDKTKVIATVSGCVDVESGSESSLKEVVSEVGPVSVAIDA 304

Query: 880 --DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DNIPYWLVRNSWGPIGPDEGFF 936
                  Y G     ++  CS   L H VL VGYG       YW+V+NSWG     EG+ 
Sbjct: 305 GHSSFQLYAGGVY--DEPLCSTSRLNHGVLCVGYGTSLQGKDYWIVKNSWGVRWGVEGYI 362

Query: 937 KIERG-NNACGIEQIAGYATI 956
           K+ R  NN CGI   A Y  +
Sbjct: 363 KMSRNKNNQCGIASEASYPLV 383



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 157/320 (49%), Gaps = 31/320 (9%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDRSP 337
           + +K F +   + Y + EE   RFE F+++  +  KH +           G ++F+D   
Sbjct: 77  QAWKEFKILHDKSYEDHEEESRRFEIFRENVLRIEKHNKLFHLGKKSYYLGVNQFTDLEY 136

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
            E +   G K +         +  K    L     +  VPD+ DWR K       +Q AC
Sbjct: 137 AEFVNFNGLKMTN-------LNNTKCSSHLSA--NNIVVPDSVDWRSKGYVTKVKNQGAC 187

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQA- 454
           GSCWAFS  G LEGQY  K GKLV  S+SQLV+C+    G  GC+G  +E   +Y     
Sbjct: 188 GSCWAFSATGSLEGQYFRKNGKLVPLSESQLVDCSGSF-GNEGCNGGFMENAFKYVKSVG 246

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN 513
           G+ESE DYPY+     +  CA+DK+KV           +GSE ++K+++ + GP+SV ++
Sbjct: 247 GIESESDYPYK---ARQRTCAFDKTKVIATVSGCVDVESGSESSLKEVVSEVGPVSVAID 303

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DDIPYWLARNSWGPIGPDEGFFK 572
           +    F        ++  CS   L H VL VGYG       YW+ +NSWG     EG+ K
Sbjct: 304 AGHSSFQLYAGGVYDEPLCSTSRLNHGVLCVGYGTSLQGKDYWIVKNSWGVRWGVEGYIK 363

Query: 573 IERG-NNACGIEQIAGYATI 591
           + R  NN CGI   A Y  +
Sbjct: 364 MSRNKNNQCGIASEASYPLV 383



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/223 (41%), Positives = 122/223 (54%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD+ DWR K       +Q  CGSCWAFS  G LEGQY  K GKLV  S+SQLV+C+   
Sbjct: 166 VPDSVDWRSKGYVTKVKNQGACGSCWAFSATGSLEGQYFRKNGKLVPLSESQLVDCSGSF 225

Query: 71  --SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              GC+G F E + +Y     G+ESE DYPYK     +  CA+DK+KV           +
Sbjct: 226 GNEGCNGGFMENAFKYVKSVGGIESESDYPYK---ARQRTCAFDKTKVIATVSGCVDVES 282

Query: 128 GSE-TMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ- 183
           GSE ++K+++ + GP+SV +++       Y G     ++  CS   L H VL VGYG   
Sbjct: 283 GSESSLKEVVSEVGPVSVAIDAGHSSFQLYAGGVY--DEPLCSTSRLNHGVLCVGYGTSL 340

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
               YW+V+NSWG     EG+ K+ R  NN CGI   A Y  +
Sbjct: 341 QGKDYWIVKNSWGVRWGVEGYIKMSRNKNNQCGIASEASYPLV 383



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 951  AGYATIDV----VKNDETCSPYDLGHAVLLVGYGKQ-DDIPYWLVRNSWGPIGPDEGFFK 1005
            AG+++  +    V ++  CS   L H VL VGYG       YW+V+NSWG     EG+ K
Sbjct: 304  AGHSSFQLYAGGVYDEPLCSTSRLNHGVLCVGYGTSLQGKDYWIVKNSWGVRWGVEGYIK 363

Query: 1006 IERG-NNACGIEQIAGYATI 1024
            + R  NN CGI   A Y  +
Sbjct: 364  MSRNKNNQCGIASEASYPLV 383


>gi|115446097|ref|NP_001046828.1| Os02g0469600 [Oryza sativa Japonica Group]
 gi|47497527|dbj|BAD19579.1| putative cysteine proteinase 1 precursor [Oryza sativa Japonica
           Group]
 gi|113536359|dbj|BAF08742.1| Os02g0469600 [Oryza sativa Japonica Group]
 gi|215701326|dbj|BAG92750.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704370|dbj|BAG93804.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215708762|dbj|BAG94031.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218200777|gb|EEC83204.1| hypothetical protein OsI_28465 [Oryza sativa Indica Group]
 gi|222622835|gb|EEE56967.1| hypothetical protein OsJ_06681 [Oryza sativa Japonica Group]
          Length = 373

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 50/337 (14%)

Query: 650 DNE---NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEF 698
           DNE   N    F +F+ + G+ Y + +E   R   FK +  +  +H+       +G ++F
Sbjct: 39  DNELELNAERHFASFVQRFGKSYRDADEHAYRLSVFKANLRRARRHQLLDPSAEHGVTKF 98

Query: 699 SDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 757
           SD +P E      G + S R + R +        +L     DG +PD +DWR     GP 
Sbjct: 99  SDLTPAEFRRAYLGLRTSRRAFLRGLGGSAHEAPVL---PTDG-LPDDFDWRDHGAVGPV 154

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCF 808
            +Q +CGSCW+FS +G LEG   + TGK+   S+ Q+V+C  +C         +GC+G  
Sbjct: 155 KNQGSCGSCWSFSASGALEGANYLATGKMDVLSEQQMVDCDHECDSSEPDSCDAGCNGGL 214

Query: 809 FEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 867
              +  Y  ++ GLESEKDYPY   +G    C +DKSK+        +     + +   L
Sbjct: 215 MTNAFSYLLKSGGLESEKDYPYTGRDG---TCKFDKSKIVTSVQNFSVVSVDEDQIAANL 271

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQDNIP----- 918
            K+GPL++ +N+  +  Y G           PY     L H VLLVGYG     P     
Sbjct: 272 VKHGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVLLVGYGASGFAPIRLKD 324

Query: 919 --YWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 950
             YW+++NSWG    + G++KI RG+N    CG++ +
Sbjct: 325 KAYWIIKNSWGENWGEHGYYKICRGSNVRNKCGVDSM 361



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 164/337 (48%), Gaps = 49/337 (14%)

Query: 284 DNE---NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEF 332
           DNE   N    F +F+ + G+ Y + +E   R   FK +  +  +H+       +G ++F
Sbjct: 39  DNELELNAERHFASFVQRFGKSYRDADEHAYRLSVFKANLRRARRHQLLDPSAEHGVTKF 98

Query: 333 SDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 391
           SD +P E      G + S R + R +        +L     DG +PD +DWR     GP 
Sbjct: 99  SDLTPAEFRRAYLGLRTSRRAFLRGLGGSAHEAPVL---PTDG-LPDDFDWRDHGAVGPV 154

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC------GGCDG-- 443
            +Q +CGSCW+FS +G LEG   + TGK+   S+ Q+V+C  +C          GC+G  
Sbjct: 155 KNQGSCGSCWSFSASGALEGANYLATGKMDVLSEQQMVDCDHECDSSEPDSCDAGCNGGL 214

Query: 444 LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKIL 502
           +     Y  ++ GLESEKDYPY   +G    C +DKSK+        +     + +   L
Sbjct: 215 MTNAFSYLLKSGGLESEKDYPYTGRDG---TCKFDKSKIVTSVQNFSVVSVDEDQIAANL 271

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDD 551
            K+GPL++G+N+  +  Y G           PY     L H VLLVGYG       +  D
Sbjct: 272 VKHGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVLLVGYGASGFAPIRLKD 324

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNA---CGIEQI 585
             YW+ +NSWG    + G++KI RG+N    CG++ +
Sbjct: 325 KAYWIIKNSWGENWGEHGYYKICRGSNVRNKCGVDSM 361



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/233 (34%), Positives = 119/233 (51%), Gaps = 34/233 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR     GP  +Q  CGSCW+FS +G LEG   + TGK+   S+ Q+V+C  +C
Sbjct: 139 LPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLATGKMDVLSEQQMVDCDHEC 198

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC+G     +  Y  ++ GLESEKDYPY   +G    C +DKSK+     
Sbjct: 199 DSSEPDSCDAGCNGGLMTNAFSYLLKSGGLESEKDYPYTGRDG---TCKFDKSKIVTSVQ 255

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K+GPL++ +N+  +  Y G           PY     L H VL
Sbjct: 256 NFSVVSVDEDQIAANLVKHGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVL 308

Query: 177 LVGYGKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 219
           LVGYG     P       YW+++NSWG    + G++KI RG+N    CG++ +
Sbjct: 309 LVGYGASGFAPIRLKDKAYWIIKNSWGENWGEHGYYKICRGSNVRNKCGVDSM 361


>gi|23397070|gb|AAN31820.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
          Length = 358

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 158/317 (49%), Gaps = 34/317 (10%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA   +  GC+G     + EY     GL++EK
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEK 227

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
            YPY   + E  K + +   V++    + +     + +K  +    P+S+    ++IH +
Sbjct: 228 AYPYTGKD-ETCKFSAENVGVQVLNSVN-ITLGAEDELKHAVGLVRPVSIAF--EVIHSF 283

Query: 886 NGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
               + K+    D  C  +P D+ HAVL VGYG +D +PYWL++NSWG    D+G+FK+E
Sbjct: 284 R---LYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKME 340

Query: 940 RGNNACGIEQIAGYATI 956
            G N CGI   A Y  +
Sbjct: 341 MGKNMCGIATCASYPVV 357



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 149/312 (47%), Gaps = 23/312 (7%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY     GL++EK
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEK 227

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS-HLIHF 519
            YPY  G  E  K + +   V++    + +     + +K  +    P+S+     H    
Sbjct: 228 AYPY-TGKDETCKFSAENVGVQVLNSVN-ITLGAEDELKHAVGLVRPVSIAFEVIHSFRL 285

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
           Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    D+G+FK+E G N 
Sbjct: 286 YKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNM 345

Query: 580 CGIEQIAGYATI 591
           CGI   A Y  +
Sbjct: 346 CGIATCASYPVV 357



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 16/227 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y    GK +  S+ QLV+CA
Sbjct: 138 EAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCA 197

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
              +  GC+G     + EY     GL++EK YPY   + E  K + +   V++    + +
Sbjct: 198 GAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVN-I 255

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLV 178
                + +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL V
Sbjct: 256 TLGAEDELKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYTDSHCGSTPMDVNHAVLAV 310

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GYG +D +PYWL++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 311 GYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVV 357


>gi|30387350|ref|NP_848429.1| cathepsin [Choristoneura fumiferana MNPV]
 gi|1168799|sp|P41715.1|CATV_NPVCF RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|332509|gb|AAA96732.1| cathepsin [Choristoneura fumiferana MNPV]
 gi|30270084|gb|AAP29900.1| cathepsin [Choristoneura fumiferana MNPV]
          Length = 324

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 163/305 (53%), Gaps = 32/305 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDG----HKKHE----RYGTSEFSDRSPEEILCK 709
           F+ F+ K  + Y+++ E   RF+ F+ +     +K H     +Y  ++F+D S +E + K
Sbjct: 28  FEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISK 87

Query: 710 -TGFKWSERTY---ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
            TG     +T    E +V DR             GP+   +DWR+ N      +Q  CG+
Sbjct: 88  YTGLSLPLQTQNFCEVVVLDRPP---------DKGPLE--FDWRRLNKVTSVKNQGMCGA 136

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESE 824
           CWAF+  G LE Q+AIK  + +  S+ QL++C    +GCDG     + E   +  G+++E
Sbjct: 137 CWAFATLGSLESQFAIKHNQFINLSEQQLIDCDFVDAGCDGGLLHTAFEAVMNMGGIQAE 196

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG-SETMKKILYKYGPLSVLLNSDLIH 883
            DYPY+  NG+   C  + +K  +   K + +     E +K +L   GP+ V +++  I 
Sbjct: 197 SDYPYEANNGD---CRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIV 253

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
           +Y     R   + C+ + L HAVLLVGY  ++ +P+W+++N+WG    ++G+F++++  N
Sbjct: 254 NYK----RGIMKYCANHGLNHAVLLVGYAVENGVPFWILKNTWGADWGEQGYFRVQQNIN 309

Query: 944 ACGIE 948
           ACGI+
Sbjct: 310 ACGIQ 314



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 161/307 (52%), Gaps = 35/307 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDG----HKKHE----RYGTSEFSDRSPEEILCK 343
           F+ F+ K  + Y+++ E   RF+ F+ +     +K H     +Y  ++F+D S +E + K
Sbjct: 28  FEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISK 87

Query: 344 -TGFKWSERTY---ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
            TG     +T    E +V DR             GP+   +DWR+ N      +Q  CG+
Sbjct: 88  YTGLSLPLQTQNFCEVVVLDRPP---------DKGPLE--FDWRRLNKVTSVKNQGMCGA 136

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIE-YTHQAGLES 458
           CWAF+  G LE Q+AIK  + +  S+ QL++C    +GC G   L    E   +  G+++
Sbjct: 137 CWAFATLGSLESQFAIKHNQFINLSEQQLIDCDFVDAGCDG-GLLHTAFEAVMNMGGIQA 195

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG-SETMKKILYKYGPLSVGLN-SHL 516
           E DYPY   NG+   C  + +K  +   K + Y     E +K +L   GP+ V ++ S +
Sbjct: 196 ESDYPYEANNGD---CRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDI 252

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
           +++  G       + C+ + L HAVLLVGY  ++ +P+W+ +N+WG    ++G+F++++ 
Sbjct: 253 VNYKRGIM-----KYCANHGLNHAVLLVGYAVENGVPFWILKNTWGADWGEQGYFRVQQN 307

Query: 577 NNACGIE 583
            NACGI+
Sbjct: 308 INACGIQ 314



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 120/208 (57%), Gaps = 9/208 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  + +  S+ QL++C    +
Sbjct: 114 PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDFVDA 173

Query: 72  GCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG-S 129
           GCDG     + E   +  G+++E DYPY+  NG+   C  + +K  +   K + +     
Sbjct: 174 GCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGD---CRANAAKFVVKVKKCYRYITVFE 230

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           E +K +L   GP+ V +++  I +Y     R   + C+ + L HAVLLVGY  ++ +P+W
Sbjct: 231 EKLKDLLRSVGPIPVAIDASDIVNYK----RGIMKYCANHGLNHAVLLVGYAVENGVPFW 286

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIE 217
           +++N+WG    ++G+F++++  NACGI+
Sbjct: 287 ILKNTWGADWGEQGYFRVQQNINACGIQ 314



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 40/52 (76%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            C+ + L HAVLLVGY  ++ +P+W+++N+WG    ++G+F++++  NACGI+
Sbjct: 263  CANHGLNHAVLLVGYAVENGVPFWILKNTWGADWGEQGYFRVQQNINACGIQ 314


>gi|57282617|emb|CAE54306.1| putative papain-like cysteine proteinase [Gossypium hirsutum]
          Length = 373

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 164/334 (49%), Gaps = 49/334 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           +  F  +  + Y + +E   RF+ F+ +  +  +H+       +G ++FSD +P E    
Sbjct: 58  YSLFKKRFKKSYGSQKEHDYRFKIFQVNLRRAARHQNLDPSATHGVTQFSDLTPGE---- 113

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+ +     R+   ++  E  ++  +    +P  +DWR+K    P  +Q +CGSCW+F
Sbjct: 114 --FRKAYLGLRRLRLPKDATEAPILPTDN---LPQDFDWREKGAVTPVKNQGSCGSCWSF 168

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G     + EYT +A 
Sbjct: 169 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAG 228

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY     ++  C +D +KV        +     + +   L+K GPL+V +N+
Sbjct: 229 GLMREEDYPYTGT--DRGTCKFDNTKVAAKVANFSVVSLDEDQIAANLFKNGPLAVAINA 286

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +  + PYW+++NSWG 
Sbjct: 287 VFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPVRMKDKPYWIIKNSWGE 339

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATIDVVKND 962
              + GF++I RG N CG++ +   +T+  V  +
Sbjct: 340 NWGENGFYRICRGRNICGVDSMV--STVAAVNTN 371



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 158/323 (48%), Gaps = 46/323 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           +  F  +  + Y + +E   RF+ F+ +  +  +H+       +G ++FSD +P E    
Sbjct: 58  YSLFKKRFKKSYGSQKEHDYRFKIFQVNLRRAARHQNLDPSATHGVTQFSDLTPGE---- 113

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+ +     R+   ++  E  ++  +    +P  +DWR+K    P  +Q +CGSCW+F
Sbjct: 114 --FRKAYLGLRRLRLPKDATEAPILPTDN---LPQDFDWREKGAVTPVKNQGSCGSCWSF 168

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G  +    EYT +A 
Sbjct: 169 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAG 228

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY     ++  C +D +KV        +     + +   L+K GPL+V +N+
Sbjct: 229 GLMREEDYPYT--GTDRGTCKFDNTKVAAKVANFSVVSLDEDQIAANLFKNGPLAVAINA 286

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  D PYW+ +NSWG 
Sbjct: 287 VFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPVRMKDKPYWIIKNSWGE 339

Query: 564 IGPDEGFFKIERGNNACGIEQIA 586
              + GF++I RG N CG++ + 
Sbjct: 340 NWGENGFYRICRGRNICGVDSMV 362



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 119/231 (51%), Gaps = 30/231 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K    P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 141 LPQDFDWREKGAVTPVKNQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 200

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY     ++  C +D +KV     
Sbjct: 201 DPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT--DRGTCKFDNTKVAAKVA 258

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L+K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 259 NFSVVSLDEDQIAANLFKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVL 311

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           LVGYG       +  + PYW+++NSWG    + GF++I RG N CG++ + 
Sbjct: 312 LVGYGSAGYAPVRMKDKPYWIIKNSWGENWGENGFYRICRGRNICGVDSMV 362



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 7/57 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 1019
            L H VLLVGYG       +  D PYW+++NSWG    + GF++I RG N CG++ + 
Sbjct: 306  LDHGVLLVGYGSAGYAPVRMKDKPYWIIKNSWGENWGENGFYRICRGRNICGVDSMV 362


>gi|449469923|ref|XP_004152668.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
 gi|449520697|ref|XP_004167370.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 371

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 179/378 (47%), Gaps = 52/378 (13%)

Query: 604 AIMLIQAVFLLCGVASCLCLPSLTDRITDQ---VVARVDTLAIEGSLTFDNENILETFKA 660
           AI L  A+ L   VA  +    +   ++D+   ++ +V + A +  LT +     + F+ 
Sbjct: 6   AIPLFFAILLSATVAYGVSSDQINSAVSDEEDILIRQVVSGADDRPLTAE-----QHFQD 60

Query: 661 FIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCKTGF 712
           F +K G+ Y  DEE   RF  FK +    K+H++      +G + FSD +  E   +  F
Sbjct: 61  FKLKFGKTYTTDEEHDYRFRVFKANLRKAKRHQKLDPDAVHGVTRFSDLTESEF--RENF 118

Query: 713 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 772
               R   R+ AD  +   +      D    D +DWR +    P  DQ +CGSCW+FS  
Sbjct: 119 VGLNRL--RLPADAHQAPIL----PTDNLASD-FDWRDQGAVTPVKDQGSCGSCWSFSAV 171

Query: 773 GMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLE 822
           G LEG   + TGKL+  S+ QLV+C  +C         +GC+G     + EY  +A GLE
Sbjct: 172 GALEGANFLSTGKLISLSEQQLVDCDHECDPEEAGACDAGCNGGLMTSAFEYIVKAGGLE 231

Query: 823 SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 882
            E+DYPY     ++  C +   K+        +  N ++ +   L K GPL++ +N+  +
Sbjct: 232 REEDYPYTGT--DRGSCKFQNGKIAASAANFSVISNDADQIAANLVKNGPLAIGINAVFM 289

Query: 883 HDYN---GTPIRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPD 932
             Y      P       CS  +L H VLLVGYG       +    PYW+++NSWG    +
Sbjct: 290 QTYMKGISCPY-----ICSKRNLDHGVLLVGYGAAGFAPIRLKEKPYWIIKNSWGENWGE 344

Query: 933 EGFFKIERGNNACGIEQI 950
            G++ I +G N CG E +
Sbjct: 345 NGYYFICKGKNICGSESM 362



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 180/378 (47%), Gaps = 51/378 (13%)

Query: 238 AIMLIQAVFLLCGVASCLCLPSLTDRITDQ---VVARVDTLAIEGSLTFDNENILETFKA 294
           AI L  A+ L   VA  +    +   ++D+   ++ +V + A +  LT +     + F+ 
Sbjct: 6   AIPLFFAILLSATVAYGVSSDQINSAVSDEEDILIRQVVSGADDRPLTAE-----QHFQD 60

Query: 295 FIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCKTGF 346
           F +K G+ Y  DEE   RF  FK +    K+H++      +G + FSD +  E   +  F
Sbjct: 61  FKLKFGKTYTTDEEHDYRFRVFKANLRKAKRHQKLDPDAVHGVTRFSDLTESEF--RENF 118

Query: 347 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 406
               R   R+ AD  +   +      D    D +DWR +    P  DQ +CGSCW+FS  
Sbjct: 119 VGLNRL--RLPADAHQAPIL----PTDNLASD-FDWRDQGAVTPVKDQGSCGSCWSFSAV 171

Query: 407 GMLEGQYAIKTGKLVEFSKSQLVECAKQCS-----GC-GGCDG--LEQPIEYTHQA-GLE 457
           G LEG   + TGKL+  S+ QLV+C  +C       C  GC+G  +    EY  +A GLE
Sbjct: 172 GALEGANFLSTGKLISLSEQQLVDCDHECDPEEAGACDAGCNGGLMTSAFEYIVKAGGLE 231

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
            E+DYPY     ++  C +   K+        +  N ++ +   L K GPL++G+N+  +
Sbjct: 232 REEDYPYT--GTDRGSCKFQNGKIAASAANFSVISNDADQIAANLVKNGPLAIGINAVFM 289

Query: 518 HFYN---GTPIRKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPD 567
             Y      P       CS  +L H VLLVGYG       +  + PYW+ +NSWG    +
Sbjct: 290 QTYMKGISCPY-----ICSKRNLDHGVLLVGYGAAGFAPIRLKEKPYWIIKNSWGENWGE 344

Query: 568 EGFFKIERGNNACGIEQI 585
            G++ I +G N CG E +
Sbjct: 345 NGYYFICKGKNICGSESM 362



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 27/225 (12%)

Query: 15  WDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---- 70
           +DWR +    P  DQ  CGSCW+FS  G LEG   + TGKL+  S+ QLV+C  +C    
Sbjct: 145 FDWRDQGAVTPVKDQGSCGSCWSFSAVGALEGANFLSTGKLISLSEQQLVDCDHECDPEE 204

Query: 71  -----SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
                +GC+G     + EY  +A GLE E+DYPY     ++  C +   K+        +
Sbjct: 205 AGACDAGCNGGLMTSAFEYIVKAGGLEREEDYPYTGT--DRGSCKFQNGKIAASAANFSV 262

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYG 181
             N ++ +   L K GPL++ +N+  +  Y      P       CS  +L H VLLVGYG
Sbjct: 263 ISNDADQIAANLVKNGPLAIGINAVFMQTYMKGISCPY-----ICSKRNLDHGVLLVGYG 317

Query: 182 -------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
                  +    PYW+++NSWG    + G++ I +G N CG E +
Sbjct: 318 AAGFAPIRLKEKPYWIIKNSWGENWGENGYYFICKGKNICGSESM 362


>gi|302754322|ref|XP_002960585.1| hypothetical protein SELMODRAFT_266583 [Selaginella moellendorffii]
 gi|300171524|gb|EFJ38124.1| hypothetical protein SELMODRAFT_266583 [Selaginella moellendorffii]
          Length = 330

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 163/322 (50%), Gaps = 46/322 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHER---YGTSEFSDRSPEEILCK 709
           FK+FI + G+ YA  E    R + F+ +      H+  +    +G ++FSD + EE   K
Sbjct: 21  FKSFIARFGKAYATAEAYAHRLKVFEANLVRAVSHQALDPSAVHGITQFSDLTEEEF--K 78

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F    R   R+   RE  +  ++       +P+ +DWR+        +Q ACGSCWAF
Sbjct: 79  QQF-LGLRVPSRL---REANKAPVLPTND---LPEDFDWREHGAVTEVKNQGACGSCWAF 131

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G +EG + ++TGKL+  S+ QLV+C   C         +GC+G     + +Y  ++ 
Sbjct: 132 STTGAIEGAHFLETGKLISLSEQQLVDCDHSCDPTDKVSCDAGCNGGLMTNAYDYVMKSG 191

Query: 820 GLESEKDYPYK-NANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
           GLE+E DYPY  N+NG   KC ++ +K+              + +   L K+GPL++ +N
Sbjct: 192 GLETETDYPYTGNSNG---KCQFNANKIVASVANFSTVSLDEDQIAANLVKHGPLAIGIN 248

Query: 879 SDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGP 928
           +  +  Y G    PI      CS + + H VLLVGYG +          PYW+++NSWG 
Sbjct: 249 AVFMQTYIGGVSCPI-----ICSKHHIDHGVLLVGYGAKGYAPIRFTEKPYWIIKNSWGA 303

Query: 929 IGPDEGFFKIERGNNACGIEQI 950
              ++G++KI RG+  CG+  +
Sbjct: 304 TWGEQGYYKICRGHGMCGMNTM 325



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 163/322 (50%), Gaps = 45/322 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHER---YGTSEFSDRSPEEILCK 343
           FK+FI + G+ YA  E    R + F+ +      H+  +    +G ++FSD + EE   K
Sbjct: 21  FKSFIARFGKAYATAEAYAHRLKVFEANLVRAVSHQALDPSAVHGITQFSDLTEEEF--K 78

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F    R   R+   RE  +  ++       +P+ +DWR+        +Q ACGSCWAF
Sbjct: 79  QQF-LGLRVPSRL---REANKAPVLPTND---LPEDFDWREHGAVTEVKNQGACGSCWAF 131

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G +EG + ++TGKL+  S+ QLV+C   C      S   GC+G  +    +Y  ++ 
Sbjct: 132 STTGAIEGAHFLETGKLISLSEQQLVDCDHSCDPTDKVSCDAGCNGGLMTNAYDYVMKSG 191

Query: 455 GLESEKDYPYR-NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
           GLE+E DYPY  N NG   KC ++ +K+              + +   L K+GPL++G+N
Sbjct: 192 GLETETDYPYTGNSNG---KCQFNANKIVASVANFSTVSLDEDQIAANLVKHGPLAIGIN 248

Query: 514 SHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLARNSWGP 563
           +  +  Y G    PI      CS + + H VLLVGYG +        + PYW+ +NSWG 
Sbjct: 249 AVFMQTYIGGVSCPI-----ICSKHHIDHGVLLVGYGAKGYAPIRFTEKPYWIIKNSWGA 303

Query: 564 IGPDEGFFKIERGNNACGIEQI 585
              ++G++KI RG+  CG+  +
Sbjct: 304 TWGEQGYYKICRGHGMCGMNTM 325



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 123/230 (53%), Gaps = 29/230 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+        +Q  CGSCWAFS  G +EG + ++TGKL+  S+ QLV+C   C
Sbjct: 104 LPEDFDWREHGAVTEVKNQGACGSCWAFSTTGAIEGAHFLETGKLISLSEQQLVDCDHSC 163

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYK-NANGEKFKCAYDKSKVKLFT 119
                    +GC+G     + +Y  ++ GLE+E DYPY  N+NG   KC ++ +K+    
Sbjct: 164 DPTDKVSCDAGCNGGLMTNAYDYVMKSGGLETETDYPYTGNSNG---KCQFNANKIVASV 220

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 176
                     + +   L K+GPL++ +N+  +  Y G    PI      CS + + H VL
Sbjct: 221 ANFSTVSLDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPI-----ICSKHHIDHGVL 275

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG +          PYW+++NSWG    ++G++KI RG+  CG+  +
Sbjct: 276 LVGYGAKGYAPIRFTEKPYWIIKNSWGATWGEQGYYKICRGHGMCGMNTM 325


>gi|13507095|gb|AAK28439.1| cysteine protease 3 precursor [Clonorchis sinensis]
          Length = 320

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 165/326 (50%), Gaps = 30/326 (9%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 691
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
              GP  DQ  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C     GC+G   + 
Sbjct: 124 GAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDGVDEGCNGGTPQQ 183

Query: 812 SI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKY 870
           +  +     GL+ + DYPY+   G+   C    SKVK++     +     +   ++L + 
Sbjct: 184 AFRQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVKVYINGSKILPEDEQIQAQMLKET 240

Query: 871 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           GPLS  LN+  +      P+      C    L HAVL VGYGK+  +PYW V+NSW  + 
Sbjct: 241 GPLSSALNALFLQH----PL---PALCDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMF 293

Query: 931 PDEGFFKIERGNNACGIEQIAGYATI 956
            + G+F+I RG+  CGI  +   + I
Sbjct: 294 GENGYFRIYRGDGTCGINTLVSTSII 319



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 162/326 (49%), Gaps = 29/326 (8%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 325
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
              GP  DQ  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C     GC G    +
Sbjct: 124 GAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDGVDEGCNGGTPQQ 183

Query: 446 QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKY 505
              +     GL+ + DYPY    G + +C    SKVK++     +     +   ++L + 
Sbjct: 184 AFRQILGMGGLQLDSDYPYE---GREGQCRMVPSKVKVYINGSKILPEDEQIQAQMLKET 240

Query: 506 GPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           GPLS  LN+  +      P+      C    L HAVL VGYGK+  +PYW  +NSW  + 
Sbjct: 241 GPLSSALNALFLQH----PL---PALCDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMF 293

Query: 566 PDEGFFKIERGNNACGIEQIAGYATI 591
            + G+F+I RG+  CGI  +   + I
Sbjct: 294 GENGYFRIYRGDGTCGINTLVSTSII 319



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 19/225 (8%)

Query: 10  PVP--------DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           PVP        D +DWR     GP  DQ DCGSCWAFS  G +EGQ+  KT  L++ S+ 
Sbjct: 105 PVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQ 164

Query: 62  QLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           QL++C     GC+G   + +  +     GL+ + DYPY+   G+   C    SKVK++  
Sbjct: 165 QLLDCDGVDEGCNGGTPQQAFRQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVKVYIN 221

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
              +     +   ++L + GPLS  LN+  +      P+      C    L HAVL VGY
Sbjct: 222 GSKILPEDEQIQAQMLKETGPLSSALNALFLQH----PL---PALCDAQSLNHAVLTVGY 274

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 275 GKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 319



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L HAVL VGYGK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 260  CDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 319


>gi|340371596|ref|XP_003384331.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 128/238 (53%), Gaps = 13/238 (5%)

Query: 725 DREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTG 784
           +RE  E   +     G +PD+ DWR K +  P  +Q  CGSCWAFS  G LEG +A KTG
Sbjct: 97  NRENHENTTIYRYTGGAIPDSVDWRTKGLVTPVKNQKQCGSCWAFSTTGSLEGAHAKKTG 156

Query: 785 KLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDK 843
           KLV  S+  LV+C K+  GC G     + +Y  +  G+++E+ YPYK  NG   +C + K
Sbjct: 157 KLVSLSEQNLVDCDKKDHGCQGGLMTTAFKYIEENKGIDTEESYPYKAKNG---RCEFKK 213

Query: 844 SKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETCS 898
             +     +   +     E +KK + + GP+SV +++     ++   + K    + + CS
Sbjct: 214 DDIGATVERHVSILTTDCEALKKAVAEIGPISVAMDA----SHSSFQLYKSGIYDPKICS 269

Query: 899 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
              L H VL+VGYGK+D   YWLV+NSWG     EG+FKI    N CGI   A Y  +
Sbjct: 270 SRKLDHGVLVVGYGKEDGEEYWLVKNSWGKNWGMEGYFKIASKKNLCGICTSACYPVV 327



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 123/223 (55%), Gaps = 13/223 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +PD+ DWR K +  P  +Q  CGSCWAFS  G LEG +A KTGKLV  S+  LV+C K
Sbjct: 112 GAIPDSVDWRTKGLVTPVKNQKQCGSCWAFSTTGSLEGAHAKKTGKLVSLSEQNLVDCDK 171

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
           +  GC G     + +Y  +  G+++E+ YPYK  NG   +C + K  +     +   +  
Sbjct: 172 KDHGCQGGLMTTAFKYIEENKGIDTEESYPYKAKNG---RCEFKKDDIGATVERHVSILT 228

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETCSPYDLGHAVLLVGYGK 182
              E +KK + + GP+SV +++     ++   + K    + + CS   L H VL+VGYGK
Sbjct: 229 TDCEALKKAVAEIGPISVAMDA----SHSSFQLYKSGIYDPKICSSRKLDHGVLVVGYGK 284

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +D   YWLV+NSWG     EG+FKI    N CGI   A Y  +
Sbjct: 285 EDGEEYWLVKNSWGKNWGMEGYFKIASKKNLCGICTSACYPVV 327



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 124/235 (52%), Gaps = 6/235 (2%)

Query: 359 DREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTG 418
           +RE  E   +     G +PD+ DWR K +  P  +Q  CGSCWAFS  G LEG +A KTG
Sbjct: 97  NRENHENTTIYRYTGGAIPDSVDWRTKGLVTPVKNQKQCGSCWAFSTTGSLEGAHAKKTG 156

Query: 419 KLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYD 477
           KLV  S+  LV+C K+  GC G   +    +Y  +  G+++E+ YPY+  NG   +C + 
Sbjct: 157 KLVSLSEQNLVDCDKKDHGCQG-GLMTTAFKYIEENKGIDTEESYPYKAKNG---RCEFK 212

Query: 478 KSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYD 536
           K  +     +   +     E +KK + + GP+SV +++    F        + + CS   
Sbjct: 213 KDDIGATVERHVSILTTDCEALKKAVAEIGPISVAMDASHSSFQLYKSGIYDPKICSSRK 272

Query: 537 LGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           L H VL+VGYGK+D   YWL +NSWG     EG+FKI    N CGI   A Y  +
Sbjct: 273 LDHGVLVVGYGKEDGEEYWLVKNSWGKNWGMEGYFKIASKKNLCGICTSACYPVV 327



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 36/60 (60%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CS   L H VL+VGYGK+D   YWLV+NSWG     EG+FKI    N CGI   A Y  +
Sbjct: 268  CSSRKLDHGVLVVGYGKEDGEEYWLVKNSWGKNWGMEGYFKIASKKNLCGICTSACYPVV 327


>gi|86355549|ref|YP_473217.1| Cathepsin [Hyphantria cunea nucleopolyhedrovirus]
 gi|86198154|dbj|BAE72318.1| Cathepsin [Hyphantria cunea nucleopolyhedrovirus]
          Length = 324

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 166/329 (50%), Gaps = 30/329 (9%)

Query: 632 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK-------- 683
           +++V  +    +  S  +D       F+ F+ K  + Y+++ E   RF+ F+        
Sbjct: 2   NKIVLCLLVFCVAHSAAYDLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIII 61

Query: 684 QDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTY---ERIVADREKVEKMLMEVEKD 739
           ++ +    +Y  ++FSD S +E + K TG     +T    E +V +R             
Sbjct: 62  KNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPP---------DK 112

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
           GP+   +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ QL++C  
Sbjct: 113 GPLE--FDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY 170

Query: 800 QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
             +GC+G     + E   Q  G+++E DYPY+ ++G                 +    F 
Sbjct: 171 VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVF- 229

Query: 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
             E +K +L   GP+ V +++  I +Y    +R     CS Y L HAVLLVGYG ++N+P
Sbjct: 230 -EEKLKDLLRIVGPIPVAIDASDIVNYRRGIMR----YCSNYGLNHAVLLVGYGVENNVP 284

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           YW+++N+WG    ++G+F++++  NACGI
Sbjct: 285 YWILKNTWGEDWGEQGYFRVQQNINACGI 313



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 167/331 (50%), Gaps = 33/331 (9%)

Query: 266 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK-------- 317
           +++V  +    +  S  +D       F+ F+ K  + Y+++ E   RF+ F+        
Sbjct: 2   NKIVLCLLVFCVAHSAAYDLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIII 61

Query: 318 QDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTY---ERIVADREKVEKMLMEVEKD 373
           ++ +    +Y  ++FSD S +E + K TG     +T    E +V +R             
Sbjct: 62  KNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPP---------DK 112

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
           GP+   +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ QL++C  
Sbjct: 113 GPLE--FDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY 170

Query: 434 QCSGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
             +GC G   L    E   Q  G+++E DYPY   +G    C  D +K  +   K + Y 
Sbjct: 171 VDAGCNG-GLLHTAYEAVMQMGGVQAENDYPYEGSDG---NCRVDVAKFVVKVKKCYRYI 226

Query: 493 NG-SETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
               E +K +L   GP+ V +++  I  Y    +R     CS Y L HAVLLVGYG +++
Sbjct: 227 AVFEEKLKDLLRIVGPIPVAIDASDIVNYRRGIMR----YCSNYGLNHAVLLVGYGVENN 282

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
           +PYW+ +N+WG    ++G+F++++  NACGI
Sbjct: 283 VPYWILKNTWGEDWGEQGYFRVQQNINACGI 313



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ QL++C    +
Sbjct: 114 PLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDYVDA 173

Query: 72  GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 130
           GC+G     + E   Q  G+++E DYPY+ ++G                 +    F   E
Sbjct: 174 GCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVF--EE 231

Query: 131 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 190
            +K +L   GP+ V +++  I +Y    +R     CS Y L HAVLLVGYG ++N+PYW+
Sbjct: 232 KLKDLLRIVGPIPVAIDASDIVNYRRGIMR----YCSNYGLNHAVLLVGYGVENNVPYWI 287

Query: 191 VRNSWGPIGPDEGFFKIERGNNACGI 216
           ++N+WG    ++G+F++++  NACGI
Sbjct: 288 LKNTWGEDWGEQGYFRVQQNINACGI 313



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 41/51 (80%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS Y L HAVLLVGYG ++++PYW+++N+WG    ++G+F++++  NACGI
Sbjct: 263  CSNYGLNHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQNINACGI 313


>gi|312281839|dbj|BAJ33785.1| unnamed protein product [Thellungiella halophila]
          Length = 373

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 154/330 (46%), Gaps = 46/330 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK 709
           F  F  K G+ YA+ EE   R   FK +  +  +H+      R+G ++FSD +  E   K
Sbjct: 56  FSLFKRKFGKVYASSEEHDYRLSVFKANLRRARRHQKLDPSARHGVTQFSDLTRSEFRKK 115

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                  R   ++  D  K   +  E      +P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 116 ---HLGVRGGFKLPKDANKAPILPTE-----NLPEDFDWRDRGAVTPVKNQGSCGSCWSF 167

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G     + EYT +  
Sbjct: 168 SATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTG 227

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY   +G    C  DKSK+        +     + +   L K GPL+V +N+
Sbjct: 228 GLMREEDYPYTGKDGP--TCKLDKSKIVASVSNFSVISIDEDQIAANLVKNGPLAVAINA 285

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG            PYW+++NSWG 
Sbjct: 286 AYMQTYIGG-------VSCPYICARRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGE 338

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATIDV 958
              + GF+KI +G N CG++ +    +  V
Sbjct: 339 SWGENGFYKICKGRNICGVDSLVSTVSATV 368



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 154/330 (46%), Gaps = 45/330 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK 343
           F  F  K G+ YA+ EE   R   FK +  +  +H+      R+G ++FSD +  E   K
Sbjct: 56  FSLFKRKFGKVYASSEEHDYRLSVFKANLRRARRHQKLDPSARHGVTQFSDLTRSEFRKK 115

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                  R   ++  D  K   +  E      +P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 116 ---HLGVRGGFKLPKDANKAPILPTE-----NLPEDFDWRDRGAVTPVKNQGSCGSCWSF 167

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G  +    EYT +  
Sbjct: 168 SATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTG 227

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY   +G    C  DKSK+        +     + +   L K GPL+V +N+
Sbjct: 228 GLMREEDYPYTGKDGP--TCKLDKSKIVASVSNFSVISIDEDQIAANLVKNGPLAVAINA 285

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG          + PYW+ +NSWG 
Sbjct: 286 AYMQTYIGG-------VSCPYICARRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGE 338

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATIDV 593
              + GF+KI +G N CG++ +    +  V
Sbjct: 339 SWGENGFYKICKGRNICGVDSLVSTVSATV 368



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 117/238 (49%), Gaps = 30/238 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR +    P  +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 140 LPEDFDWRDRGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHEC 199

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +  GL  E+DYPY   +G    C  DKSK+     
Sbjct: 200 DPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGKDGP--TCKLDKSKIVASVS 257

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 258 NFSVISIDEDQIAANLVKNGPLAVAINAAYMQTYIGG-------VSCPYICARRLNHGVL 310

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           LVGYG            PYW+++NSWG    + GF+KI +G N CG++ +    +  V
Sbjct: 311 LVGYGSAGYAPARFKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVSATV 368


>gi|77379397|gb|ABA71355.1| cysteine protease [Brassica napus]
          Length = 359

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 157/322 (48%), Gaps = 44/322 (13%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 59  SFARFTHRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFTDMTWQEF-- 116

Query: 709 KTGFKWSERT----YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
                  +RT     +   A  +   K+  E      +P+  DWR+  +  P  DQ  CG
Sbjct: 117 -------QRTKLGAAQNCSATLKGTHKLTGEA-----LPETKDWREDGIVSPVKDQGGCG 164

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGL 821
           SCW FS  G LE  Y    GK +  S+ QLV+CA   +  GC+G     + EY     GL
Sbjct: 165 SCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGL 224

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSD 880
           ++E+ YPY    GE   C Y    V +       +     + +K  +    P+S+    +
Sbjct: 225 DTEEAYPY---TGEDGTCKYSAENVGVQVLDSVNITLGAEDELKHAVGLLRPVSIAF--E 279

Query: 881 LIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEG 934
           +IH +    + K+    D  C  +P D+ HAVL VGYG +D +PYWL++NSWG    D+G
Sbjct: 280 VIHSFR---LYKSGVYSDSHCGQTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGADWGDKG 336

Query: 935 FFKIERGNNACGIEQIAGYATI 956
           +FK+E G N CGI   A Y  +
Sbjct: 337 YFKMEMGKNMCGIATCASYPVV 358



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 149/317 (47%), Gaps = 33/317 (10%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 59  SFARFTHRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFTDMTWQEF-- 116

Query: 343 KTGFKWSERT----YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
                  +RT     +   A  +   K+  E      +P+  DWR+  +  P  DQ  CG
Sbjct: 117 -------QRTKLGAAQNCSATLKGTHKLTGEA-----LPETKDWREDGIVSPVKDQGGCG 164

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGL 456
           SCW FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY     GL
Sbjct: 165 SCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGL 224

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS- 514
           ++E+ YPY    GE   C Y    V +          G+E  +K  +    P+S+     
Sbjct: 225 DTEEAYPY---TGEDGTCKYSAENVGVQVLDSVNITLGAEDELKHAVGLLRPVSIAFEVI 281

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
           H    Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    D+G+FK+E
Sbjct: 282 HSFRLYKSGVYSDSHCGQTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGADWGDKGYFKME 341

Query: 575 RGNNACGIEQIAGYATI 591
            G N CGI   A Y  +
Sbjct: 342 MGKNMCGIATCASYPVV 358



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 116/225 (51%), Gaps = 18/225 (8%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y    GK +  S+ QLV+CA   
Sbjct: 142 LPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAF 201

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
           +  GC+G     + EY     GL++E+ YPY    GE   C Y    V +       +  
Sbjct: 202 NNYGCNGGLPSQAFEYIKSNGGLDTEEAYPY---TGEDGTCKYSAENVGVQVLDSVNITL 258

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGY 180
              + +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL VGY
Sbjct: 259 GAEDELKHAVGLLRPVSIAF--EVIHSFR---LYKSGVYSDSHCGQTPMDVNHAVLAVGY 313

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           G +D +PYWL++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 314 GIEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVV 358



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V +D  C  +P D+ HAVL VGYG +D +PYWL++NSWG    D+G+FK+E G N CGI 
Sbjct: 291  VYSDSHCGQTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIA 350

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 351  TCASYPVV 358


>gi|118394988|ref|XP_001029851.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89284124|gb|EAR82188.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 330

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 155/327 (47%), Gaps = 35/327 (10%)

Query: 648 TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-------KHERYGTSEFSD 700
           T  +++I   FK F     ++Y+++E    R   FK++  +          ++G ++F+D
Sbjct: 20  TMQDQDIAAAFKKFTQTYNKKYSSEEHYNARLSIFKENLRRIELFNKNDEAQHGITQFAD 79

Query: 701 RSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 759
            + EE      G+K   R  +  V+                  P A DW  K    P  +
Sbjct: 80  LTHEEFADMYLGYKPQLRNSQAKVSLSST----------PFTAPTAIDWTTKGAVTPVKN 129

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGK-LVEFSKSQLVEC-AKQCSGCDGCFFEPSIEYTH 817
           Q +CGSCWAFS  G +EGQY ++  + L  FS+ QLV+C  K+  GC+G   + +  Y  
Sbjct: 130 QGSCGSCWAFSTTGSIEGQYVLQLKQNLTSFSEQQLVDCDTKEDQGCNGGLMDNAFTYLE 189

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSK--------VKLFTGKDFLHFNGSETMKKILYK 869
            A LE+E  YPY   +G    C Y++S         V +  GK     +   TM   L  
Sbjct: 190 SAKLETESAYPYTAVDGS---CKYNQSLGVVGVASFVDIEQGKTVA--DTENTMGVALDN 244

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GPLSV +N++ +  Y G     N   C+P  L H VL+VG G ++   +W V+NSWG  
Sbjct: 245 IGPLSVAINANNLQFYAGGI--SNPLICNPNGLNHGVLIVGLGSENGKDFWKVKNSWGAS 302

Query: 930 GPDEGFFKIERGNNACGIEQIAGYATI 956
             ++G+F+I RG   CGI +   Y  +
Sbjct: 303 WGEKGYFRIVRGKGKCGINRAVSYPVL 329



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 154/328 (46%), Gaps = 36/328 (10%)

Query: 282 TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-------KHERYGTSEFSD 334
           T  +++I   FK F     ++Y+++E    R   FK++  +          ++G ++F+D
Sbjct: 20  TMQDQDIAAAFKKFTQTYNKKYSSEEHYNARLSIFKENLRRIELFNKNDEAQHGITQFAD 79

Query: 335 RSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 393
            + EE      G+K   R  +  V+                  P A DW  K    P  +
Sbjct: 80  LTHEEFADMYLGYKPQLRNSQAKVSLSST----------PFTAPTAIDWTTKGAVTPVKN 129

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGK-LVEFSKSQLVEC-AKQCSGCGGCDGLEQPIEYT 451
           Q +CGSCWAFS  G +EGQY ++  + L  FS+ QLV+C  K+  GC G   ++    Y 
Sbjct: 130 QGSCGSCWAFSTTGSIEGQYVLQLKQNLTSFSEQQLVDCDTKEDQGCNG-GLMDNAFTYL 188

Query: 452 HQAGLESEKDYPYRNGNGEKFKCAYDKSK--------VKLFTGKDFLYFNGSETMKKILY 503
             A LE+E  YPY   +G    C Y++S         V +  GK     +   TM   L 
Sbjct: 189 ESAKLETESAYPYTAVDGS---CKYNQSLGVVGVASFVDIEQGKTVA--DTENTMGVALD 243

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GPLSV +N++ + FY G     N   C+P  L H VL+VG G ++   +W  +NSWG 
Sbjct: 244 NIGPLSVAINANNLQFYAGGI--SNPLICNPNGLNHGVLIVGLGSENGKDFWKVKNSWGA 301

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              ++G+F+I RG   CGI +   Y  +
Sbjct: 302 SWGEKGYFRIVRGKGKCGINRAVSYPVL 329



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 115/225 (51%), Gaps = 17/225 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGK-LVEFSKSQLVEC-AK 68
            P A DW  K    P  +Q  CGSCWAFS  G +EGQY ++  + L  FS+ QLV+C  K
Sbjct: 112 APTAIDWTTKGAVTPVKNQGSCGSCWAFSTTGSIEGQYVLQLKQNLTSFSEQQLVDCDTK 171

Query: 69  QCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK--------VKLFTG 120
           +  GC+G   + +  Y   A LE+E  YPY   +G    C Y++S         V +  G
Sbjct: 172 EDQGCNGGLMDNAFTYLESAKLETESAYPYTAVDGS---CKYNQSLGVVGVASFVDIEQG 228

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
           K     +   TM   L   GPLSV +N++ +  Y G     N   C+P  L H VL+VG 
Sbjct: 229 KTVA--DTENTMGVALDNIGPLSVAINANNLQFYAGGI--SNPLICNPNGLNHGVLIVGL 284

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           G ++   +W V+NSWG    ++G+F+I RG   CGI +   Y  +
Sbjct: 285 GSENGKDFWKVKNSWGASWGEKGYFRIVRGKGKCGINRAVSYPVL 329



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 19/118 (16%)

Query: 925  SWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV------------------VKNDETCS 966
            S G +G    F  IE+G      E   G A  ++                  + N   C+
Sbjct: 213  SLGVVGV-ASFVDIEQGKTVADTENTMGVALDNIGPLSVAINANNLQFYAGGISNPLICN 271

Query: 967  PYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            P  L H VL+VG G ++   +W V+NSWG    ++G+F+I RG   CGI +   Y  +
Sbjct: 272  PNGLNHGVLIVGLGSENGKDFWKVKNSWGASWGEKGYFRIVRGKGKCGINRAVSYPVL 329


>gi|357158628|ref|XP_003578189.1| PREDICTED: thiol protease aleurain-like [Brachypodium distachyon]
          Length = 363

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 149/315 (47%), Gaps = 31/315 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           F  F V+ G+ Y +  E++ RF  F +   +           R G + +SD S       
Sbjct: 62  FARFAVRYGKSYESAAEVQRRFRIFSESLEEVRSTNQKGLSYRLGINRYSDMS------- 114

Query: 710 TGFKWSERTYERIVADREKVEKML--MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
               W E    R+ A +     +     ++    +P+  DWR+  +  P  DQ+ CGSCW
Sbjct: 115 ----WEEFQASRLGAAQTCSATLRGNHRMQDANALPETKDWREDGIVSPVKDQSHCGSCW 170

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESE 824
            FS  G LE  Y   TGK +  S+ QLV+CA   +  GC+G     + EY  +  GL++E
Sbjct: 171 TFSTTGALEAAYTQATGKNISLSEQQLVDCAGAYNNFGCNGGLPSQAFEYIKYNGGLDTE 230

Query: 825 KDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DL 881
           + YPYK  NG    C Y  + + V++    + +  N  + ++  +    P+SV     + 
Sbjct: 231 ESYPYKGVNG---VCHYKPENAAVQVLDSVN-ITLNAEDELQNAVGLVRPVSVAFEVING 286

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
              Y       +    +P D+ HAVL VGYG ++  PYWL++NSWG    D+G+FK+ERG
Sbjct: 287 FRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGTPYWLIKNSWGESWGDKGYFKMERG 346

Query: 942 NNACGIEQIAGYATI 956
            N C +   A Y  +
Sbjct: 347 KNMCAVATCASYPIV 361



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 147/315 (46%), Gaps = 30/315 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           F  F V+ G+ Y +  E++ RF  F +   +           R G + +SD S       
Sbjct: 62  FARFAVRYGKSYESAAEVQRRFRIFSESLEEVRSTNQKGLSYRLGINRYSDMS------- 114

Query: 344 TGFKWSERTYERIVADREKVEKML--MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
               W E    R+ A +     +     ++    +P+  DWR+  +  P  DQ+ CGSCW
Sbjct: 115 ----WEEFQASRLGAAQTCSATLRGNHRMQDANALPETKDWREDGIVSPVKDQSHCGSCW 170

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESE 459
            FS  G LE  Y   TGK +  S+ QLV+CA   +  G   GL  Q  EY  +  GL++E
Sbjct: 171 TFSTTGALEAAYTQATGKNISLSEQQLVDCAGAYNNFGCNGGLPSQAFEYIKYNGGLDTE 230

Query: 460 KDYPYRNGNGEKFKCAY--DKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS-HL 516
           + YPY+  NG    C Y  + + V++    + +  N  + ++  +    P+SV     + 
Sbjct: 231 ESYPYKGVNG---VCHYKPENAAVQVLDSVN-ITLNAEDELQNAVGLVRPVSVAFEVING 286

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y       +    +P D+ HAVL VGYG ++  PYWL +NSWG    D+G+FK+ERG
Sbjct: 287 FRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGTPYWLIKNSWGESWGDKGYFKMERG 346

Query: 577 NNACGIEQIAGYATI 591
            N C +   A Y  +
Sbjct: 347 KNMCAVATCASYPIV 361



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 117/221 (52%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  DQ+ CGSCW FS  G LE  Y   TGK +  S+ QLV+CA   
Sbjct: 145 LPETKDWREDGIVSPVKDQSHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGAY 204

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLH 125
           +  GC+G     + EY  +  GL++E+ YPYK  NG    C Y  + + V++    + + 
Sbjct: 205 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYKGVNG---VCHYKPENAAVQVLDSVN-IT 260

Query: 126 FNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
            N  + ++  +    P+SV     +    Y       +    +P D+ HAVL VGYG ++
Sbjct: 261 LNAEDELQNAVGLVRPVSVAFEVINGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVEN 320

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
             PYWL++NSWG    D+G+FK+ERG N C +   A Y  +
Sbjct: 321 GTPYWLIKNSWGESWGDKGYFKMERGKNMCAVATCASYPIV 361



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 40/59 (67%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +P D+ HAVL VGYG ++  PYWL++NSWG    D+G+FK+ERG N C +   A Y  +
Sbjct: 303  TPDDVNHAVLAVGYGVENGTPYWLIKNSWGESWGDKGYFKMERGKNMCAVATCASYPIV 361


>gi|343477619|emb|CCD11596.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 158/319 (49%), Gaps = 26/319 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +     +  A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYLNGAKYYAAALKRPRKVVTVS-TGKAPPAIDWRKKGAVTPVKDQRKC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   + ++++   +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDNMDDGCQGGLMDRALKWIVSSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLN 878
           + +E+ YPY + +G+   C  +KS KV        ++    E  + + L K GP+++ ++
Sbjct: 208 VFTEESYPYDSTDGDVPPC--NKSGKVVGAKISGLINLPKDENAIAEWLAKNGPIAIAVD 265

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +    DY G  +     +CS   L H VLLVGY      PYW+++NSWG    +EG+ ++
Sbjct: 266 ASSFLDYTGGVL----TSCSSDALNHDVLLVGYDDSSKPPYWIIKNSWGKKWGEEGYIRV 321

Query: 939 ERGNNACGIEQIAGYATID 957
           E+G N C +++ A  A + 
Sbjct: 322 EKGTNQCLMKEYARSAVVS 340



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 147/317 (46%), Gaps = 21/317 (6%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +     +  A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYLNGAKYYAAALKRPRKVVTVS-TGKAPPAIDWRKKGAVTPVKDQRKC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   D   + I  +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDNMDDGCQGGLMDRALKWIVSSNKGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           + +E+ YPY + +G+   C      V                + + L K GP+++ +++ 
Sbjct: 208 VFTEESYPYDSTDGDVPPCNKSGKVVGAKISGLINLPKDENAIAEWLAKNGPIAIAVDAS 267

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
               Y G  +     +CS   L H VLLVGY      PYW+ +NSWG    +EG+ ++E+
Sbjct: 268 SFLDYTGGVL----TSCSSDALNHDVLLVGYDDSSKPPYWIIKNSWGKKWGEEGYIRVEK 323

Query: 576 GNNACGIEQIAGYATID 592
           G N C +++ A  A + 
Sbjct: 324 GTNQCLMKEYARSAVVS 340



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 11/223 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWRKK    P  DQ  CGSCWAFS  G +EGQ+ +   +L   S+  LV C  
Sbjct: 124 GKAPPAIDWRKKGAVTPVKDQRKCGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDN 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFL 124
              GC G   + ++++   +++  + +E+ YPY + +G+   C  +KS KV        +
Sbjct: 184 MDDGCQGGLMDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPC--NKSGKVVGAKISGLI 241

Query: 125 HFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +    E  + + L K GP+++ +++    DY G  +     +CS   L H VLLVGY   
Sbjct: 242 NLPKDENAIAEWLAKNGPIAIAVDASSFLDYTGGVL----TSCSSDALNHDVLLVGYDDS 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
              PYW+++NSWG    +EG+ ++E+G N C +++ A  A + 
Sbjct: 298 SKPPYWIIKNSWGKKWGEEGYIRVEKGTNQCLMKEYARSAVVS 340



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 19/119 (15%)

Query: 908  LVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKNDETCS 966
            L+   K +N I  WL +N    I  D   F          ++   G  T        +CS
Sbjct: 240  LINLPKDENAIAEWLAKNGPIAIAVDASSF----------LDYTGGVLT--------SCS 281

Query: 967  PYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
               L H VLLVGY      PYW+++NSWG    +EG+ ++E+G N C +++ A  A + 
Sbjct: 282  SDALNHDVLLVGYDDSSKPPYWIIKNSWGKKWGEEGYIRVEKGTNQCLMKEYARSAVVS 340


>gi|1619903|gb|AAB16996.1| thiol protease isoform B, partial [Glycine max]
          Length = 319

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 144/314 (45%), Gaps = 47/314 (14%)

Query: 665 RGRQYANDEEIKERFEYFKQDGHKKH-------ERYGTSEFSDRSPEEILCKTGFKWSER 717
           R R YA  EE   RF  FK +  +           +G ++FSD +P E           R
Sbjct: 13  RPRPYATKEEHDHRFGVFKSNLRRASCTPSSTPRVHGVTKFSDLTPAEF---------RR 63

Query: 718 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEG 777
            +  + A R         +     +P  +DWR K       DQ  CGSCW+FS  G LEG
Sbjct: 64  QFLGLKAVRFPAHAQKAPILPTKDLPKDFDWRDKGAVTNVKDQGGCGSCWSFSTTGALEG 123

Query: 778 QYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDY 827
            Y + TG+LV  S+ QLV+C   C         SGC+G     + EY  Q+ G++ EKDY
Sbjct: 124 AYYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDY 183

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG 887
           PY   +G    C +DK+KV        +     E +   L K GPL+V +N+  +  Y G
Sbjct: 184 PYTGRDG---TCKFDKTKVAATVSNYSVVCLDEEQIAANLVKNGPLAVAINAVFMQTYVG 240

Query: 888 TPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFF 936
                      PY     L H VLLVGYG       +  N PYW+++NSWG    + G+ 
Sbjct: 241 G-------VSCPYICGKHLDHGVLLVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYD 293

Query: 937 KIERGNNACGIEQI 950
           +I RG N CG++ +
Sbjct: 294 EICRGRNVCGVDSM 307



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 143/314 (45%), Gaps = 46/314 (14%)

Query: 299 RGRQYANDEEIKERFEYFKQDGHKKH-------ERYGTSEFSDRSPEEILCKTGFKWSER 351
           R R YA  EE   RF  FK +  +           +G ++FSD +P E           R
Sbjct: 13  RPRPYATKEEHDHRFGVFKSNLRRASCTPSSTPRVHGVTKFSDLTPAEF---------RR 63

Query: 352 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEG 411
            +  + A R         +     +P  +DWR K       DQ  CGSCW+FS  G LEG
Sbjct: 64  QFLGLKAVRFPAHAQKAPILPTKDLPKDFDWRDKGAVTNVKDQGGCGSCWSFSTTGALEG 123

Query: 412 QYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEYTHQA-GLESEKDY 462
            Y + TG+LV  S+ QLV+C   C       C  GC+G  +    EY  Q+ G++ EKDY
Sbjct: 124 AYYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDY 183

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
           PY   +G    C +DK+KV        +     E +   L K GPL+V +N+  +  Y G
Sbjct: 184 PYTGRDG---TCKFDKTKVAATVSNYSVVCLDEEQIAANLVKNGPLAVAINAVFMQTYVG 240

Query: 523 TPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGFF 571
                      PY     L H VLLVGYG       +  + PYW+ +NSWG    + G+ 
Sbjct: 241 G-------VSCPYICGKHLDHGVLLVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYD 293

Query: 572 KIERGNNACGIEQI 585
           +I RG N CG++ +
Sbjct: 294 EICRGRNVCGVDSM 307



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 116/230 (50%), Gaps = 31/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K       DQ  CGSCW+FS  G LEG Y + TG+LV  S+ QLV+C   C
Sbjct: 88  LPKDFDWRDKGAVTNVKDQGGCGSCWSFSTTGALEGAYYLATGELVSLSEQQLVDCDHVC 147

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  Q+ G++ EKDYPY   +G    C +DK+KV     
Sbjct: 148 DPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDG---TCKFDKTKVAATVS 204

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 205 NYSVVCLDEEQIAANLVKNGPLAVAINAVFMQTYVGG-------VSCPYICGKHLDHGVL 257

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +  N PYW+++NSWG    + G+ +I RG N CG++ +
Sbjct: 258 LVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYDEICRGRNVCGVDSM 307



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    + G+ +I RG N CG++ +
Sbjct: 252  LDHGVLLVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYDEICRGRNVCGVDSM 307


>gi|261328617|emb|CBH11595.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
 gi|261328620|emb|CBH11598.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
          Length = 450

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 23/323 (7%)

Query: 645 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 696
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY- 815
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     GC G   + +  + 
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWI 200

Query: 816 --THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
             ++   + +E  YPY + NGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           ++ +++    DYNG  +     +C+   L H VLLVGY    N PYW+++NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 22/323 (6%)

Query: 279 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 330
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPI 448
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     GCGG   D     I
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWI 200

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
             ++   + +E  YPY +GNGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           ++ +++     YNG  +     +C+   L H VLLVGY    + PYW+ +NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C  
Sbjct: 124 GRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++          
Sbjct: 184 IDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDL 243

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N
Sbjct: 244 PQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSN 299

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 300 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 279  SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|261328615|emb|CBH11593.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
          Length = 451

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 23/323 (7%)

Query: 645 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 696
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY- 815
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     GC G   + +  + 
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWI 200

Query: 816 --THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
             ++   + +E  YPY + NGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           ++ +++    DYNG  +     +C+   L H VLLVGY    N PYW+++NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 22/323 (6%)

Query: 279 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 330
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPI 448
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     GCGG   D     I
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWI 200

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
             ++   + +E  YPY +GNGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           ++ +++     YNG  +     +C+   L H VLLVGY    + PYW+ +NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C  
Sbjct: 124 GRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++          
Sbjct: 184 IDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDL 243

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N
Sbjct: 244 PQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSN 299

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 300 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 279  SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|10391|emb|CAA38238.1| unnamed protein product [Trypanosoma brucei]
          Length = 450

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 23/323 (7%)

Query: 645 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 696
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRVRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY- 815
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     GC G   + +  + 
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWI 200

Query: 816 --THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
             ++   + +E  YPY + NGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           ++ +++    DYNG  +     +C+   L H VLLVGY    N PYW+++NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 22/323 (6%)

Query: 279 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 330
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRVRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPI 448
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     GCGG   D     I
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWI 200

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
             ++   + +E  YPY +GNGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           ++ +++     YNG  +     +C+   L H VLLVGY    + PYW+ +NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C  
Sbjct: 124 GRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++          
Sbjct: 184 IDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDL 243

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N
Sbjct: 244 PQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSN 299

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 300 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 279  SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|15485586|emb|CAC67416.1| cysteine protease [Trypanosoma brucei rhodesiense]
          Length = 450

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 23/323 (7%)

Query: 645 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 696
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY- 815
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     GC G   + +  + 
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWI 200

Query: 816 --THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
             ++   + +E  YPY + NGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           ++ +++    DYNG  +     +C+   L H VLLVGY    N PYW+++NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDSSNPPYWIIKNSWSNMWGED 316

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 22/323 (6%)

Query: 279 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 330
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPI 448
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     GCGG   D     I
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWI 200

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
             ++   + +E  YPY +GNGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           ++ +++     YNG  +     +C+   L H VLLVGY    + PYW+ +NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDSSNPPYWIIKNSWSNMWGED 316

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C  
Sbjct: 124 GRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++          
Sbjct: 184 IDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDL 243

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N
Sbjct: 244 PQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDSSN 299

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 300 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 279  SCTSEQLDHGVLLVGYNDSSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|18424347|ref|NP_568921.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|71152227|sp|Q8H166.2|ALEU_ARATH RecName: Full=Thiol protease aleurain; Short=AtALEU; AltName:
           Full=Senescence-associated gene product 2; Flags:
           Precursor
 gi|7230640|gb|AAF43041.1|AF233883_1 AALP protein [Arabidopsis thaliana]
 gi|13430722|gb|AAK25983.1|AF360273_1 putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|9757740|dbj|BAB08221.1| AALP protein [Arabidopsis thaliana]
 gi|21617934|gb|AAM66984.1| cysteine proteinase AALP [Arabidopsis thaliana]
 gi|23397068|gb|AAN31819.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|23397074|gb|AAN31822.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|24417304|gb|AAN60262.1| unknown [Arabidopsis thaliana]
 gi|222423506|dbj|BAH19723.1| AT5G60360 [Arabidopsis thaliana]
 gi|222424411|dbj|BAH20161.1| AT5G60360 [Arabidopsis thaliana]
 gi|332009930|gb|AED97313.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 358

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 158/317 (49%), Gaps = 34/317 (10%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA   +  GC+G     + EY     GL++EK
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEK 227

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
            YPY   + E  K + +   V++    + +     + +K  +    P+S+    ++IH +
Sbjct: 228 AYPYTGKD-ETCKFSAENVGVQVLNSVN-ITLGAEDELKHAVGLVRPVSIAF--EVIHSF 283

Query: 886 NGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
               + K+    D  C  +P D+ HAVL VGYG +D +PYWL++NSWG    D+G+FK+E
Sbjct: 284 R---LYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKME 340

Query: 940 RGNNACGIEQIAGYATI 956
            G N CGI   A Y  +
Sbjct: 341 MGKNMCGIATCASYPVV 357



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 149/312 (47%), Gaps = 23/312 (7%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY     GL++EK
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEK 227

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS-HLIHF 519
            YPY  G  E  K + +   V++    + +     + +K  +    P+S+     H    
Sbjct: 228 AYPY-TGKDETCKFSAENVGVQVLNSVN-ITLGAEDELKHAVGLVRPVSIAFEVIHSFRL 285

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
           Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    D+G+FK+E G N 
Sbjct: 286 YKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNM 345

Query: 580 CGIEQIAGYATI 591
           CGI   A Y  +
Sbjct: 346 CGIATCASYPVV 357



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 16/227 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y    GK +  S+ QLV+CA
Sbjct: 138 EAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCA 197

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
              +  GC+G     + EY     GL++EK YPY   + E  K + +   V++    + +
Sbjct: 198 GAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVN-I 255

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLV 178
                + +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL V
Sbjct: 256 TLGAEDELKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYTDSHCGSTPMDVNHAVLAV 310

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GYG +D +PYWL++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 311 GYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVV 357


>gi|402585860|gb|EJW79799.1| cysteine protease 6 [Wuchereria bancrofti]
          Length = 242

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 122/217 (56%), Gaps = 5/217 (2%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P+ +DW  K V  P  +Q +CGSCWAFS+ G +E  +AIKTG L+  S+ +L++C    
Sbjct: 29  LPNKFDWNTKGVVTPVKNQGSCGSCWAFSVTGNIESLWAIKTGNLISLSEQELIDCDVID 88

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
           +GC G   +    E     GLE E  YPY+  NG    C   ++++ + T  D +    +
Sbjct: 89  NGCNGGLPINAFREIKRMGGLEPEDQYPYKAKNG---TCHLVRAQIAV-TIDDAIEIPRN 144

Query: 496 ET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPY 554
           ET MK  + + GPLSVG+++ L+ +Y    +  +   C P  + H VL+ GYG ++ +PY
Sbjct: 145 ETVMKAWIAQRGPLSVGIDAELLAYYKSGILHPSKSRCPPSKINHGVLITGYGIENGLPY 204

Query: 555 WLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           W  +NSWG    + G+F++ RG + CG+  +   A I
Sbjct: 205 WTIKNSWGEEWGENGYFRLMRGKDICGVSDLVSSAII 241



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 122/217 (56%), Gaps = 6/217 (2%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +P+ +DW  K V  P  +Q +CGSCWAFS+ G +E  +AIKTG L+  S+ +L++C    
Sbjct: 29  LPNKFDWNTKGVVTPVKNQGSCGSCWAFSVTGNIESLWAIKTGNLISLSEQELIDCDVID 88

Query: 802 SGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
           +GC+G        E     GLE E  YPYK  NG    C   ++++ + T  D +    +
Sbjct: 89  NGCNGGLPINAFREIKRMGGLEPEDQYPYKAKNG---TCHLVRAQIAV-TIDDAIEIPRN 144

Query: 861 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 919
           ET MK  + + GPLSV ++++L+  Y    +  +   C P  + H VL+ GYG ++ +PY
Sbjct: 145 ETVMKAWIAQRGPLSVGIDAELLAYYKSGILHPSKSRCPPSKINHGVLITGYGIENGLPY 204

Query: 920 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           W ++NSWG    + G+F++ RG + CG+  +   A I
Sbjct: 205 WTIKNSWGEEWGENGYFRLMRGKDICGVSDLVSSAII 241



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 121/217 (55%), Gaps = 6/217 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DW  K V  P  +Q  CGSCWAFS+ G +E  +AIKTG L+  S+ +L++C    
Sbjct: 29  LPNKFDWNTKGVVTPVKNQGSCGSCWAFSVTGNIESLWAIKTGNLISLSEQELIDCDVID 88

Query: 71  SGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           +GC+G        E     GLE E  YPYK  NG    C   ++++ + T  D +    +
Sbjct: 89  NGCNGGLPINAFREIKRMGGLEPEDQYPYKAKNG---TCHLVRAQIAV-TIDDAIEIPRN 144

Query: 130 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
           ET MK  + + GPLSV ++++L+  Y    +  +   C P  + H VL+ GYG ++ +PY
Sbjct: 145 ETVMKAWIAQRGPLSVGIDAELLAYYKSGILHPSKSRCPPSKINHGVLITGYGIENGLPY 204

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W ++NSWG    + G+F++ RG + CG+  +   A I
Sbjct: 205 WTIKNSWGEEWGENGYFRLMRGKDICGVSDLVSSAII 241



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 939  ERGNNACGI--EQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGP 996
            +RG  + GI  E +A Y +  +  +   C P  + H VL+ GYG ++ +PYW ++NSWG 
Sbjct: 154  QRGPLSVGIDAELLAYYKSGILHPSKSRCPPSKINHGVLITGYGIENGLPYWTIKNSWGE 213

Query: 997  IGPDEGFFKIERGNNACGIEQIAGYATI 1024
               + G+F++ RG + CG+  +   A I
Sbjct: 214  EWGENGYFRLMRGKDICGVSDLVSSAII 241


>gi|72389859|ref|XP_845224.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359932|gb|AAX80357.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801759|gb|AAZ11665.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 450

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 23/323 (7%)

Query: 645 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 696
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY- 815
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     GC G   + +  + 
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWI 200

Query: 816 --THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
             ++   + +E  YPY + NGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           ++ +++    DYNG  +     +C+   L H VLLVGY    N PYW+++NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 22/323 (6%)

Query: 279 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 330
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPI 448
             DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     GCGG   D     I
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWI 200

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
             ++   + +E  YPY +GNGE+ +C  +  ++              + +   L + GPL
Sbjct: 201 VNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           ++ +++     YNG  +     +C+   L H VLLVGY    + PYW+ +NSW  +  ++
Sbjct: 261 AIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGED 316

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+ +IE+G N C + Q    A +
Sbjct: 317 GYIRIEKGTNQCLMNQAVSSAVV 339



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C  
Sbjct: 124 GRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++          
Sbjct: 184 IDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDL 243

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N
Sbjct: 244 PQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDNSN 299

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 300 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 279  SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|7211743|gb|AAF40415.1|AF216784_1 papain-like cysteine proteinase isoform II [Ipomoea batatas]
          Length = 368

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 159/335 (47%), Gaps = 47/335 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCK 709
           F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD +P E   +
Sbjct: 51  FTVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDSTPTEF--R 108

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F    R   +  AD  K   +L   E    +P  +DWR +    P  +Q  CG CW+F
Sbjct: 109 RKFLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDRGAVTPVKNQGTCGLCWSF 162

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS---------GCDGCFFEPSIEYTHQA- 819
           S  G LEG   + TGKLV  S+ QLV+C  +C          GC+G     + EYT +A 
Sbjct: 163 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDFGCNGGLMNSAFEYTLKAG 222

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY   + +   C +DK+K+        +     + +   L K GPL+V +N+
Sbjct: 223 GLMREEDYPYTGNDLQ--VCRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINA 280

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +    PYW+++NSWG 
Sbjct: 281 VFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGE 333

Query: 929 IGPDEGFFKIERGNNACGIEQ-IAGYATIDVVKND 962
              + G++KI RG N CG++  ++  A +    +D
Sbjct: 334 SWGENGYYKICRGRNVCGVDSMVSTVAAVSTTTSD 368



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 156/322 (48%), Gaps = 45/322 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCK 343
           F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD +P E   +
Sbjct: 51  FTVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDSTPTEF--R 108

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F    R   +  AD  K   +L   E    +P  +DWR +    P  +Q  CG CW+F
Sbjct: 109 RKFLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDRGAVTPVKNQGTCGLCWSF 162

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-----GCG-GCDG--LEQPIEYTHQA- 454
           S  G LEG   + TGKLV  S+ QLV+C  +C       C  GC+G  +    EYT +A 
Sbjct: 163 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDFGCNGGLMNSAFEYTLKAG 222

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY  GN  +  C +DK+K+        +     + +   L K GPL+V +N+
Sbjct: 223 GLMREEDYPY-TGNDLQV-CRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINA 280

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  + PYW+ +NSWG 
Sbjct: 281 VFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGE 333

Query: 564 IGPDEGFFKIERGNNACGIEQI 585
              + G++KI RG N CG++ +
Sbjct: 334 SWGENGYYKICRGRNVCGVDSM 355



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 115/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR +    P  +Q  CG CW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 135 LPSDFDWRDRGAVTPVKNQGTCGLCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 194

Query: 71  S---------GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                     GC+G     + EYT +A GL  E+DYPY   + +   C +DK+K+     
Sbjct: 195 DPEEAGSCDFGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQ--VCRFDKTKIAAKVA 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 253 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVL 305

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 306 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 355



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  A  I  +     I  V     CS   L H VLLVGYG       +  + PYW++
Sbjct: 269  VKNGPLAVAINAVFMQTYIGGVSCPYICSKR-LDHGVLLVGYGSAGYAPIRMKEKPYWII 327

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    + G++KI RG N CG++ +
Sbjct: 328  KNSWGESWGENGYYKICRGRNVCGVDSM 355


>gi|18141289|gb|AAL60582.1|AF454960_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 359

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 157/322 (48%), Gaps = 44/322 (13%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 59  SFARFAHRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADMTWQEF-- 116

Query: 709 KTGFKWSERT----YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
                  +RT     +   A  +   K+  E      +P+  DWR+  +  P  DQ  CG
Sbjct: 117 -------QRTKLGAAQNCSATLKGTHKLTGEA-----LPETKDWREDGIVSPVKDQGGCG 164

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGL 821
           SCW FS  G LE  Y    GK +  S+ QLV+CA   +  GC+G     + EY     GL
Sbjct: 165 SCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGL 224

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSD 880
           ++E+ YPY    GE   C Y    V +       +     + +K  +    P+S+    +
Sbjct: 225 DTEEAYPY---TGEDGTCKYSAENVGVEVLDSVNITLGAEDELKHAVGLVRPVSIAF--E 279

Query: 881 LIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEG 934
           +IH +    + K+    D  C  +P D+ HAVL VGYG +D +PYWL++NSWG    D+G
Sbjct: 280 VIHSFR---LYKSGVYSDSHCGQTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGADWGDKG 336

Query: 935 FFKIERGNNACGIEQIAGYATI 956
           +FK+E G N CGI   A Y  +
Sbjct: 337 YFKMEMGKNMCGIATCASYPVV 358



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 149/317 (47%), Gaps = 33/317 (10%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 59  SFARFAHRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADMTWQEF-- 116

Query: 343 KTGFKWSERT----YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
                  +RT     +   A  +   K+  E      +P+  DWR+  +  P  DQ  CG
Sbjct: 117 -------QRTKLGAAQNCSATLKGTHKLTGEA-----LPETKDWREDGIVSPVKDQGGCG 164

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGL 456
           SCW FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY     GL
Sbjct: 165 SCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGL 224

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS- 514
           ++E+ YPY    GE   C Y    V +          G+E  +K  +    P+S+     
Sbjct: 225 DTEEAYPY---TGEDGTCKYSAENVGVEVLDSVNITLGAEDELKHAVGLVRPVSIAFEVI 281

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
           H    Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    D+G+FK+E
Sbjct: 282 HSFRLYKSGVYSDSHCGQTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGADWGDKGYFKME 341

Query: 575 RGNNACGIEQIAGYATI 591
            G N CGI   A Y  +
Sbjct: 342 MGKNMCGIATCASYPVV 358



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 116/225 (51%), Gaps = 18/225 (8%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y    GK +  S+ QLV+CA   
Sbjct: 142 LPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAF 201

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
           +  GC+G     + EY     GL++E+ YPY    GE   C Y    V +       +  
Sbjct: 202 NNYGCNGGLPSQAFEYIKSNGGLDTEEAYPY---TGEDGTCKYSAENVGVEVLDSVNITL 258

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGY 180
              + +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL VGY
Sbjct: 259 GAEDELKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYSDSHCGQTPMDVNHAVLAVGY 313

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           G +D +PYWL++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 314 GIEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVV 358


>gi|94480716|emb|CAI91577.1| cathepsin L [Aphrocallistes vastus]
          Length = 329

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 173/369 (46%), Gaps = 60/369 (16%)

Query: 608 IQAVFLLCGV--ASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKR 665
           ++ VFLL G+   +C+CL   T+ + D         A EG               + +K 
Sbjct: 1   MKLVFLLLGLFAGACVCLQCETEEVQD--------FAWEG---------------WKLKY 37

Query: 666 GRQYANDEEIKERF--------EYFKQDGHKKHERYGTSEFSDRSPEEIL-CKTGFKWSE 716
            R Y  DEE++++         + F  +GH    +   ++F+D +  E      G+    
Sbjct: 38  NRSYGLDEELRKKIWANNMLYVKEFNAEGHSY--KLAANQFADLTNLEYRQIYLGYDNEA 95

Query: 717 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 776
           R        R++  K+     KD  +P   DWR K V  P  +Q  CGSCW+FS  G LE
Sbjct: 96  RL------SRKREGKVFQRKMKDEDLPTTVDWRSKGVVTPVKNQGQCGSCWSFSATGSLE 149

Query: 777 GQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANG 834
           GQYAIK+GKLV FS+ +LV+C+      GC G   + + +Y      E E DY Y   NG
Sbjct: 150 GQYAIKSGKLVSFSEQELVDCSTSLGNHGCQGGLMDYAFKYWETNLAEKESDYTYTAKNG 209

Query: 835 EKFKCAYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNSD-----LIHDYNG 887
              KC Y+ +++ +     F        + +K+ +   GP++V +++      + H    
Sbjct: 210 ---KCKYN-AQLGVTKDSSFTDIPSENCDALKEAVANKGPIAVAMDASHTSFQMYHSGIY 265

Query: 888 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           TP       CS   L H VL+VGYG  + + YWL++NSWG     +G+FKIE  ++ CGI
Sbjct: 266 TPF-----LCSKTKLDHGVLVVGYGTDNGVDYWLIKNSWGMAWGMDGYFKIEMKSDKCGI 320

Query: 948 EQIAGYATI 956
              A Y  +
Sbjct: 321 CTQASYPNL 329



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 171/367 (46%), Gaps = 55/367 (14%)

Query: 242 IQAVFLLCGV--ASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKR 299
           ++ VFLL G+   +C+CL   T+ + D         A EG               + +K 
Sbjct: 1   MKLVFLLLGLFAGACVCLQCETEEVQD--------FAWEG---------------WKLKY 37

Query: 300 GRQYANDEEIKERF--------EYFKQDGHKKHERYGTSEFSDRSPEEIL-CKTGFKWSE 350
            R Y  DEE++++         + F  +GH    +   ++F+D +  E      G+    
Sbjct: 38  NRSYGLDEELRKKIWANNMLYVKEFNAEGHSY--KLAANQFADLTNLEYRQIYLGYDNEA 95

Query: 351 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 410
           R        R++  K+     KD  +P   DWR K V  P  +Q  CGSCW+FS  G LE
Sbjct: 96  RL------SRKREGKVFQRKMKDEDLPTTVDWRSKGVVTPVKNQGQCGSCWSFSATGSLE 149

Query: 411 GQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGN 468
           GQYAIK+GKLV FS+ +LV+C+    G  GC G  ++   +Y      E E DY Y   N
Sbjct: 150 GQYAIKSGKLVSFSEQELVDCSTSL-GNHGCQGGLMDYAFKYWETNLAEKESDYTYTAKN 208

Query: 469 GEKFKCAYDKSKVKLFTGKDFLYFN----GSETMKKILYKYGPLSVGLNSHLIHFYNGTP 524
           G   KC Y+    +L   KD  + +      + +K+ +   GP++V +++    F     
Sbjct: 209 G---KCKYN---AQLGVTKDSSFTDIPSENCDALKEAVANKGPIAVAMDASHTSFQMYHS 262

Query: 525 IRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQ 584
                  CS   L H VL+VGYG  + + YWL +NSWG     +G+FKIE  ++ CGI  
Sbjct: 263 GIYTPFLCSKTKLDHGVLVVGYGTDNGVDYWLIKNSWGMAWGMDGYFKIEMKSDKCGICT 322

Query: 585 IAGYATI 591
            A Y  +
Sbjct: 323 QASYPNL 329



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 120/228 (52%), Gaps = 18/228 (7%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           KD  +P   DWR K V  P  +Q  CGSCW+FS  G LEGQYAIK+GKLV FS+ +LV+C
Sbjct: 111 KDEDLPTTVDWRSKGVVTPVKNQGQCGSCWSFSATGSLEGQYAIKSGKLVSFSEQELVDC 170

Query: 67  AKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +      GC G   + + +Y      E E DY Y   NG   KC Y+ +++ +     F 
Sbjct: 171 STSLGNHGCQGGLMDYAFKYWETNLAEKESDYTYTAKNG---KCKYN-AQLGVTKDSSFT 226

Query: 125 HF--NGSETMKKILYKYGPLSVLLNSD-----LIHDYNGTPIRKNDETCSPYDLGHAVLL 177
                  + +K+ +   GP++V +++      + H    TP       CS   L H VL+
Sbjct: 227 DIPSENCDALKEAVANKGPIAVAMDASHTSFQMYHSGIYTPF-----LCSKTKLDHGVLV 281

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           VGYG  + + YWL++NSWG     +G+FKIE  ++ CGI   A Y  +
Sbjct: 282 VGYGTDNGVDYWLIKNSWGMAWGMDGYFKIEMKSDKCGICTQASYPNL 329



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CS   L H VL+VGYG  + + YWL++NSWG     +G+FKIE  ++ CGI   A Y  +
Sbjct: 270  CSKTKLDHGVLVVGYGTDNGVDYWLIKNSWGMAWGMDGYFKIEMKSDKCGICTQASYPNL 329


>gi|14602252|ref|NP_148795.1| ORF11 cathepsin [Cydia pomonella granulovirus]
 gi|13124000|sp|O91466.1|CATV_GVCPM RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|14591773|gb|AAK70678.1| ORF11 cathepsin [Cydia pomonella granulovirus]
          Length = 333

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 171/334 (51%), Gaps = 23/334 (6%)

Query: 626 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 685
           +T  +   ++A V T+    +LT+D  N  E FK F +K  + Y +DEE   + E FK +
Sbjct: 1   MTKLLNFVILASVLTVTAH-ALTYDLNNSDELFKNFAIKYNKTYVSDEERAIKLENFKNN 59

Query: 686 GHKKHER--------YGTSEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKMLMEV 736
               +E+        +  +E+SD +   +L +T GF+   +         E    ++++ 
Sbjct: 60  LKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTE-CSVVVIKD 118

Query: 737 EKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 796
           E    +P+  DWR K+   P  +Q  CGSCWAFS    +E  Y IK  K +  S+  LV 
Sbjct: 119 EPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVN 178

Query: 797 CAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
           C    +GC G     ++E   Q  G+ S ++ PY   +G   K  ++ S     +G    
Sbjct: 179 CDNINNGCAGGLMHWALESILQEGGVVSAENEPYYGFDGVCKKSPFELS----ISGSRRY 234

Query: 856 HFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTP-IRKNDETCSPYDLGHAVLLVGYGK 913
                  ++++L   GP+SV ++ SDLI+   G   I +N+E      L HAVLLVGYG 
Sbjct: 235 VLQNENKLRELLVVNGPISVAIDVSDLINYKAGIADICENNE-----GLNHAVLLVGYGV 289

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           ++++PYW+++NSWG    +EG+F+++R  N+CG+
Sbjct: 290 KNDVPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 171/336 (50%), Gaps = 26/336 (7%)

Query: 260 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 319
           +T  +   ++A V T+    +LT+D  N  E FK F +K  + Y +DEE   + E FK +
Sbjct: 1   MTKLLNFVILASVLTVTAH-ALTYDLNNSDELFKNFAIKYNKTYVSDEERAIKLENFKNN 59

Query: 320 GHKKHER--------YGTSEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKMLMEV 370
               +E+        +  +E+SD +   +L +T GF+   +         E    ++++ 
Sbjct: 60  LKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTE-CSVVVIKD 118

Query: 371 EKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 430
           E    +P+  DWR K+   P  +Q  CGSCWAFS    +E  Y IK  K +  S+  LV 
Sbjct: 119 EPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVN 178

Query: 431 CAKQCSGCGGCDGLEQ-PIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKD 488
           C    +GC G  GL    +E   Q  G+ S ++ PY   +G   K  ++ S     +G  
Sbjct: 179 CDNINNGCAG--GLMHWALESILQEGGVVSAENEPYYGFDGVCKKSPFELS----ISGSR 232

Query: 489 FLYFNGSETMKKILYKYGPLSVGLN-SHLIHFYNGTP-IRKNDETCSPYDLGHAVLLVGY 546
                    ++++L   GP+SV ++ S LI++  G   I +N+E      L HAVLLVGY
Sbjct: 233 RYVLQNENKLRELLVVNGPISVAIDVSDLINYKAGIADICENNE-----GLNHAVLLVGY 287

Query: 547 GKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
           G ++D+PYW+ +NSWG    +EG+F+++R  N+CG+
Sbjct: 288 GVKNDVPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 120/218 (55%), Gaps = 15/218 (6%)

Query: 5   VEKDGP---VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           V KD P   +P+  DWR K+   P  +Q +CGSCWAFS    +E  Y IK  K +  S+ 
Sbjct: 115 VIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQ 174

Query: 62  QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
            LV C    +GC G     ++E   Q  G+ S ++ PY   +G   K  ++ S     +G
Sbjct: 175 HLVNCDNINNGCAGGLMHWALESILQEGGVVSAENEPYYGFDGVCKKSPFELS----ISG 230

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTP-IRKNDETCSPYDLGHAVLLV 178
                      ++++L   GP+SV ++ SDLI+   G   I +N+E      L HAVLLV
Sbjct: 231 SRRYVLQNENKLRELLVVNGPISVAIDVSDLINYKAGIADICENNE-----GLNHAVLLV 285

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           GYG ++++PYW+++NSWG    +EG+F+++R  N+CG+
Sbjct: 286 GYGVKNDVPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 7/65 (10%)

Query: 951  AGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN 1010
            AG A  D+ +N+E      L HAVLLVGYG ++D+PYW+++NSWG    +EG+F+++R  
Sbjct: 266  AGIA--DICENNE-----GLNHAVLLVGYGVKNDVPYWILKNSWGAEWGEEGYFRVQRDK 318

Query: 1011 NACGI 1015
            N+CG+
Sbjct: 319  NSCGM 323


>gi|29789900|gb|AAF21457.2|U56958_1 cysteine proteinase [Paragonimus westermani]
          Length = 272

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 125/233 (53%), Gaps = 15/233 (6%)

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           RYG ++FSD +PEE   K         Y     + ++V+++     K    P+  DWR K
Sbjct: 15  RYGVTQFSDLTPEEFAAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAK 63

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
                  +Q +CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC+G +   
Sbjct: 64  GAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAADGCNGGWPAS 123

Query: 812 S-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKY 870
           S +E  H  GLES+ DYPY    G K +C  +K ++              +     L ++
Sbjct: 124 SYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERLLAKIDDSIALXPSEDDNAAYLAEH 180

Query: 871 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 923
           GPLS LLN+  +  Y    I  +   CSP DL HAVL VGY K+ ++PYW+++
Sbjct: 181 GPLSTLLNAITLQYYQSGIIHPSYXXCSPVDLNHAVLTVGYDKEGDMPYWIIK 233



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 121/233 (51%), Gaps = 14/233 (6%)

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           RYG ++FSD +PEE   K         Y     + ++V+++     K    P+  DWR K
Sbjct: 15  RYGVTQFSDLTPEEFAAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAK 63

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
                  +Q +CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC G     
Sbjct: 64  GAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAADGCNGGWPAS 123

Query: 446 QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKY 505
             +E  H  GLES+ DYPY    G K +C  +K ++              +     L ++
Sbjct: 124 SYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERLLAKIDDSIALXPSEDDNAAYLAEH 180

Query: 506 GPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLAR 558
           GPLS  LN+  + +Y    I  +   CSP DL HAVL VGY K+ D+PYW+ +
Sbjct: 181 GPLSTLLNAITLQYYQSGIIHPSYXXCSPVDLNHAVLTVGYDKEGDMPYWIIK 233



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 102/183 (55%), Gaps = 4/183 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P+  DWR K       +Q  CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C +  
Sbjct: 54  APERIDWRAKGAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAA 113

Query: 71  SGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G +   S +E  H  GLES+ DYPY    G K +C  +K ++              
Sbjct: 114 DGCNGGWPASSYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERLLAKIDDSIALXPSE 170

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           +     L ++GPLS LLN+  +  Y    I  +   CSP DL HAVL VGY K+ ++PYW
Sbjct: 171 DDNAAYLAEHGPLSTLLNAITLQYYQSGIIHPSYXXCSPVDLNHAVLTVGYDKEGDMPYW 230

Query: 190 LVR 192
           +++
Sbjct: 231 IIK 233



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/27 (62%), Positives = 22/27 (81%)

Query: 965 CSPYDLGHAVLLVGYGKQDDIPYWLVR 991
           CSP DL HAVL VGY K+ D+PYW+++
Sbjct: 207 CSPVDLNHAVLTVGYDKEGDMPYWIIK 233


>gi|516865|emb|CAA52403.1| putative thiol protease [Arabidopsis thaliana]
          Length = 313

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 153/324 (47%), Gaps = 56/324 (17%)

Query: 661 FIVKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEE-----IL 707
           F  K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E     + 
Sbjct: 3   FKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLG 62

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
            K GFK  +   +  +   + +             P+ +DWR +    P  +Q +CGSCW
Sbjct: 63  VKGGFKLPKDANQAPILPTQNL-------------PEEFDWRDRGAVTPVKNQGSCGSCW 109

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYT-H 817
           +FS  G LEG + + TGKLV  S+ QLV+C  +C         SGC+G     + EYT  
Sbjct: 110 SFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLK 169

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             GL  EKDYPY   +G    C  D+SK+        +     + +   L K GPL+V +
Sbjct: 170 TGGLMREKDYPYTGTDGG--SCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAI 227

Query: 878 NSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSW 926
           N+  +  Y G           PY     L H VLLVGYG       +    PYW+++NSW
Sbjct: 228 NAAYMQTYIGG-------VSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSW 280

Query: 927 GPIGPDEGFFKIERGNNACGIEQI 950
           G    + GF+KI +G N CG++ +
Sbjct: 281 GESWGENGFYKICKGRNICGVDSL 304



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 153/324 (47%), Gaps = 55/324 (16%)

Query: 295 FIVKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEE-----IL 341
           F  K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E     + 
Sbjct: 3   FKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLG 62

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
            K GFK  +   +  +   + +             P+ +DWR +    P  +Q +CGSCW
Sbjct: 63  VKGGFKLPKDANQAPILPTQNL-------------PEEFDWRDRGAVTPVKNQGSCGSCW 109

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYT-H 452
           +FS  G LEG + + TGKLV  S+ QLV+C  +C      S   GC+G  +    EYT  
Sbjct: 110 SFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLK 169

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             GL  EKDYPY   +G    C  D+SK+        +     + +   L K GPL+V +
Sbjct: 170 TGGLMREKDYPYTGTDGG--SCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAI 227

Query: 513 NSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSW 561
           N+  +  Y G           PY     L H VLLVGYG       +  + PYW+ +NSW
Sbjct: 228 NAAYMQTYIGG-------VSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSW 280

Query: 562 GPIGPDEGFFKIERGNNACGIEQI 585
           G    + GF+KI +G N CG++ +
Sbjct: 281 GESWGENGFYKICKGRNICGVDSL 304



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 116/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR +    P  +Q  CGSCW+FS  G LEG + + TGKLV  S+ QLV+C  +C
Sbjct: 84  LPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHEC 143

Query: 71  ---------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT    GL  EKDYPY   +G    C  D+SK+     
Sbjct: 144 DPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGG--SCKLDRSKIVASVS 201

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 202 NFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGG-------VSCPYICSRRLNHGVL 254

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + GF+KI +G N CG++ +
Sbjct: 255 LVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSL 304



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    + GF+KI +G N CG++ +
Sbjct: 249  LNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSL 304


>gi|2511691|emb|CAB17075.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 365

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 145/327 (44%), Gaps = 48/327 (14%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPE 704
           N    F  F  K G+ YA  EE   RF  FK +  +            +G ++FSD +P 
Sbjct: 46  NAEHHFSTFKSKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDPSAVHGVTKFSDLTPA 105

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E           R +  +   R         +     +P  +DWR K       DQ +CG
Sbjct: 106 EF---------HRKFLGLKPLRLPAHAQKAPILPTNNLPKDFDWRDKGAVTNVKDQGSCG 156

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCW+FS  G LEG + + TG+LV  S+ QLV+C   C         SGC+G     + EY
Sbjct: 157 SCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGSCDSGCNGGLMNNAFEY 216

Query: 816 -THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
                G++ EKDYPY   +G    C +DKSK+        +     E +   L K GPL+
Sbjct: 217 LIGSGGVQREKDYPYTGRDG---TCKFDKSKIAASVSNYSVISLDEEQIAANLVKNGPLA 273

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVR 923
           V +N+  +  Y G           PY     L H VLLVGYG       +    PYW+++
Sbjct: 274 VAINAVYMQTYVGG-------VSCPYICGKHLDHGVLLVGYGEGAYAPIRFKEKPYWIIK 326

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQI 950
           NSWG      G++KI RG N CG++ +
Sbjct: 327 NSWGENWGGNGYYKICRGRNVCGVDSM 353



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 145/327 (44%), Gaps = 47/327 (14%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPE 338
           N    F  F  K G+ YA  EE   RF  FK +  +            +G ++FSD +P 
Sbjct: 46  NAEHHFSTFKSKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDPSAVHGVTKFSDLTPA 105

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E           R +  +   R         +     +P  +DWR K       DQ +CG
Sbjct: 106 EF---------HRKFLGLKPLRLPAHAQKAPILPTNNLPKDFDWRDKGAVTNVKDQGSCG 156

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEY 450
           SCW+FS  G LEG + + TG+LV  S+ QLV+C   C      S   GC+G  +    EY
Sbjct: 157 SCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGSCDSGCNGGLMNNAFEY 216

Query: 451 -THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
                G++ EKDYPY   +G    C +DKSK+        +     E +   L K GPL+
Sbjct: 217 LIGSGGVQREKDYPYTGRDG---TCKFDKSKIAASVSNYSVISLDEEQIAANLVKNGPLA 273

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLAR 558
           V +N+  +  Y G           PY     L H VLLVGYG       +  + PYW+ +
Sbjct: 274 VAINAVYMQTYVGG-------VSCPYICGKHLDHGVLLVGYGEGAYAPIRFKEKPYWIIK 326

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQI 585
           NSWG      G++KI RG N CG++ +
Sbjct: 327 NSWGENWGGNGYYKICRGRNVCGVDSM 353



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 113/230 (49%), Gaps = 31/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K       DQ  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C   C
Sbjct: 134 LPKDFDWRDKGAVTNVKDQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVC 193

Query: 71  ---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY     G++ EKDYPY   +G    C +DKSK+     
Sbjct: 194 DPEEYGSCDSGCNGGLMNNAFEYLIGSGGVQREKDYPYTGRDG---TCKFDKSKIAASVS 250

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NYSVISLDEEQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYICGKHLDHGVL 303

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG      G++KI RG N CG++ +
Sbjct: 304 LVGYGEGAYAPIRFKEKPYWIIKNSWGENWGGNGYYKICRGRNVCGVDSM 353



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG      G++KI RG N CG++ +
Sbjct: 298  LDHGVLLVGYGEGAYAPIRFKEKPYWIIKNSWGENWGGNGYYKICRGRNVCGVDSM 353


>gi|351726954|ref|NP_001236888.1| cysteine proteinase precursor [Glycine max]
 gi|479060|emb|CAA83673.1| cysteine proteinase [Glycine max]
 gi|300507422|gb|ADK24076.1| cysteine proteinase [Glycine max]
 gi|300507425|gb|ADK24077.1| cysteine proteinase [Glycine max]
 gi|1096153|prf||2111244A Cys protease
          Length = 380

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 181/387 (46%), Gaps = 66/387 (17%)

Query: 609 QAVFLLCGVASCLCLPSLT---DRITDQVVARVDTLAIEGSLTFDNENILET---FKAFI 662
            A+  L  V+  LC  +L+      T Q +AR   L        DNE +L T   FK F+
Sbjct: 7   HALMCLARVSLFLCALTLSAAHGSTTVQDIARKLKLG-------DNE-LLRTEKKFKVFM 58

Query: 663 VKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCKTGFKW 714
              GR Y+ +EE   R   F Q+  +  E         +G ++FSD + +E         
Sbjct: 59  ENYGRSYSTEEEYLRRLGIFAQNMVRAAEHQALDPTAVHGVTQFSDLTEDEF-------- 110

Query: 715 SERTYERI----VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 770
            E+ Y  +     +       +   +E DG +P+ +DWR+K        Q  CGSCWAFS
Sbjct: 111 -EKLYTGVNGGFPSSNNAAGGIAPPLEVDG-LPENFDWREKGAVTEVKLQGRCGSCWAFS 168

Query: 771 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-G 820
             G +EG   + TGKLV  S+ QL++C  +C         +GC+G     +  Y  ++ G
Sbjct: 169 TTGSIEGANFLATGKLVSLSEQQLLDCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGG 228

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNS 879
           LE E  YPY    GE+ +C +D  K+ +    +F +    E  +   L K GPL++ +N+
Sbjct: 229 LEEESSYPY---TGERGECKFDPEKIAVKI-TNFTNIPADENQIAAYLVKNGPLAMGVNA 284

Query: 880 DLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPI 929
             +  Y G    P+      CS   L H VLLVGYG       +  N PYW+++NSWG  
Sbjct: 285 IFMQTYIGGVSCPL-----ICSKKRLNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGEK 339

Query: 930 GPDEGFFKIERGNNACGIEQIAGYATI 956
             ++G++K+ RG+  CGI  +   A +
Sbjct: 340 WGEDGYYKLCRGHGMCGINTMVSAAMV 366



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 179/387 (46%), Gaps = 65/387 (16%)

Query: 243 QAVFLLCGVASCLCLPSLT---DRITDQVVARVDTLAIEGSLTFDNENILET---FKAFI 296
            A+  L  V+  LC  +L+      T Q +AR   L        DNE +L T   FK F+
Sbjct: 7   HALMCLARVSLFLCALTLSAAHGSTTVQDIARKLKLG-------DNE-LLRTEKKFKVFM 58

Query: 297 VKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCKTGFKW 348
              GR Y+ +EE   R   F Q+  +  E         +G ++FSD + +E         
Sbjct: 59  ENYGRSYSTEEEYLRRLGIFAQNMVRAAEHQALDPTAVHGVTQFSDLTEDEF-------- 110

Query: 349 SERTYERI----VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 404
            E+ Y  +     +       +   +E DG +P+ +DWR+K        Q  CGSCWAFS
Sbjct: 111 -EKLYTGVNGGFPSSNNAAGGIAPPLEVDG-LPENFDWREKGAVTEVKLQGRCGSCWAFS 168

Query: 405 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDGLEQPIEYTH---QAG 455
             G +EG   + TGKLV  S+ QL++C  +C     + C  GC+G      Y +     G
Sbjct: 169 TTGSIEGANFLATGKLVSLSEQQLLDCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGG 228

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNS 514
           LE E  YPY    GE+ +C +D  K+ +    +F      E  +   L K GPL++G+N+
Sbjct: 229 LEEESSYPY---TGERGECKFDPEKIAVKI-TNFTNIPADENQIAAYLVKNGPLAMGVNA 284

Query: 515 HLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLARNSWGPI 564
             +  Y G    P+      CS   L H VLLVGYG       +  + PYW+ +NSWG  
Sbjct: 285 IFMQTYIGGVSCPL-----ICSKKRLNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGEK 339

Query: 565 GPDEGFFKIERGNNACGIEQIAGYATI 591
             ++G++K+ RG+  CGI  +   A +
Sbjct: 340 WGEDGYYKLCRGHGMCGINTMVSAAMV 366



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 126/242 (52%), Gaps = 31/242 (12%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           +E DG +P+ +DWR+K        Q  CGSCWAFS  G +EG   + TGKLV  S+ QL+
Sbjct: 135 LEVDG-LPENFDWREKGAVTEVKLQGRCGSCWAFSTTGSIEGANFLATGKLVSLSEQQLL 193

Query: 65  ECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK 114
           +C  +C         +GC+G     +  Y  ++ GLE E  YPY    GE+ +C +D  K
Sbjct: 194 DCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPY---TGERGECKFDPEK 250

Query: 115 VKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYD 170
           + +    +F +    E  +   L K GPL++ +N+  +  Y G    P+      CS   
Sbjct: 251 IAVKI-TNFTNIPADENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSCPL-----ICSKKR 304

Query: 171 LGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 223
           L H VLLVGYG       +  N PYW+++NSWG    ++G++K+ RG+  CGI  +   A
Sbjct: 305 LNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGEKWGEDGYYKLCRGHGMCGINTMVSAA 364

Query: 224 TI 225
            +
Sbjct: 365 MV 366


>gi|115479391|ref|NP_001063289.1| Os09g0442300 [Oryza sativa Japonica Group]
 gi|115510968|sp|P25778.2|ORYC_ORYSJ RecName: Full=Oryzain gamma chain; Flags: Precursor
 gi|51535997|dbj|BAD38077.1| putative oryzain gamma chain precursor [Oryza sativa Japonica
           Group]
 gi|113631522|dbj|BAF25203.1| Os09g0442300 [Oryza sativa Japonica Group]
 gi|215694919|dbj|BAG90110.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 362

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 143/315 (45%), Gaps = 31/315 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           F  F V+ G++Y +  E++ RF  F +               R G + F+D S       
Sbjct: 62  FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMS------- 114

Query: 710 TGFKWSERTYERIVADREKVEKML--MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
               W E    R+ A +     +     +     +P+  DWR+  +  P  DQ  CGSCW
Sbjct: 115 ----WEEFQASRLGAAQNCSATLAGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCW 170

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESE 824
            FS  G LE  Y   TGK V  S+ QLV+CA   +  GC G     + EY  +  GL++E
Sbjct: 171 TFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTE 230

Query: 825 KDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DL 881
           + YPY   NG    C Y  +   VK+    + +     + +K  +    P+SV     + 
Sbjct: 231 EAYPYTGVNG---ICHYKPENVGVKVLDSVN-ITLGAEDELKNAVGLVRPVSVAFQVING 286

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
              Y       +    SP D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G
Sbjct: 287 FRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMG 346

Query: 942 NNACGIEQIAGYATI 956
            N CGI   A Y  +
Sbjct: 347 KNMCGIATCASYPIV 361



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 142/315 (45%), Gaps = 30/315 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           F  F V+ G++Y +  E++ RF  F +               R G + F+D S       
Sbjct: 62  FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMS------- 114

Query: 344 TGFKWSERTYERIVADREKVEKML--MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
               W E    R+ A +     +     +     +P+  DWR+  +  P  DQ  CGSCW
Sbjct: 115 ----WEEFQASRLGAAQNCSATLAGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCW 170

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESE 459
            FS  G LE  Y   TGK V  S+ QLV+CA   +  G   GL  Q  EY  +  GL++E
Sbjct: 171 TFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTE 230

Query: 460 KDYPYRNGNGEKFKCAY--DKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS-HL 516
           + YPY   NG    C Y  +   VK+    + +     + +K  +    P+SV     + 
Sbjct: 231 EAYPYTGVNG---ICHYKPENVGVKVLDSVN-ITLGAEDELKNAVGLVRPVSVAFQVING 286

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y       +    SP D+ HAVL VGYG ++ +PYWL +NSWG    D G+FK+E G
Sbjct: 287 FRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMG 346

Query: 577 NNACGIEQIAGYATI 591
            N CGI   A Y  +
Sbjct: 347 KNMCGIATCASYPIV 361



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 112/221 (50%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA   
Sbjct: 145 LPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAY 204

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLH 125
           +  GC G     + EY  +  GL++E+ YPY   NG    C Y  +   VK+    + + 
Sbjct: 205 NNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENVGVKVLDSVN-IT 260

Query: 126 FNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
               + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG ++
Sbjct: 261 LGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVEN 320

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 321 GVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 361



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 40/59 (67%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            SP D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 303  SPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 361


>gi|338712411|ref|XP_001491536.3| PREDICTED: cathepsin F [Equus caballus]
          Length = 459

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 142/314 (45%), Gaps = 21/314 (6%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           +   FK F+    R Y   EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 158 MASIFKHFVTTYNRTYETKEEAQWRMSIFASNMVRAQKIQALDRGTAQYGVTKFSDLTEE 217

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y   +   E   KM          P  WDWR K       DQ  CG
Sbjct: 218 EF---------RTIYLNPLLKEEPGVKMRRAKSVGDSAPPEWDWRSKGAVTEVKDQGMCG 268

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G              GLE+
Sbjct: 269 SCWAFSVTGNVEGQWFLNRGALLSLSEQELLDCDKVDKACMGGLPSNAYSAIKTLGGLET 328

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E DY Y   +G    C++   K K++           + +   L K GP+SV +N+  + 
Sbjct: 329 EDDYSY---HGHLQACSFSAEKAKVYINDSVELTKNEQKLAAWLAKKGPISVAINAFGMQ 385

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY           CSP+ + HAVLLVGYG +  +P+W  +NSWG    +EG++ + RG+ 
Sbjct: 386 FYRHGISHPLRPLCSPWLIDHAVLLVGYGNRSAVPFWAIKNSWGTDWGEEGYYYLYRGSG 445

Query: 579 ACGIEQIAGYATID 592
           ACG+  +A  A ++
Sbjct: 446 ACGVNTMASSAVVN 459



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 146/316 (46%), Gaps = 26/316 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           +   FK F+    R Y   EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 158 MASIFKHFVTTYNRTYETKEEAQWRMSIFASNMVRAQKIQALDRGTAQYGVTKFSDLTEE 217

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y   +   E   KM          P  WDWR K       DQ  CG
Sbjct: 218 EF---------RTIYLNPLLKEEPGVKMRRAKSVGDSAPPEWDWRSKGAVTEVKDQGMCG 268

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QAGL 821
           SCWAFS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+      GL
Sbjct: 269 SCWAFSVTGNVEGQWFLNRGALLSLSEQELLDCDKVDKACMGGL--PSNAYSAIKTLGGL 326

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           E+E DY Y   +G    C++   K K++           + +   L K GP+SV +N+  
Sbjct: 327 ETEDDYSY---HGHLQACSFSAEKAKVYINDSVELTKNEQKLAAWLAKKGPISVAINAFG 383

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y           CSP+ + HAVLLVGYG +  +P+W ++NSWG    +EG++ + RG
Sbjct: 384 MQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRSAVPFWAIKNSWGTDWGEEGYYYLYRG 443

Query: 942 NNACGIEQIAGYATID 957
           + ACG+  +A  A ++
Sbjct: 444 SGACGVNTMASSAVVN 459



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 115/219 (52%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 246 APPEWDWRSKGAVTEVKDQGMCGSCWAFSVTGNVEGQWFLNRGALLSLSEQELLDCDKVD 305

Query: 71  SGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+      GLE+E DY Y   +G    C++   K K++         
Sbjct: 306 KACMGGL--PSNAYSAIKTLGGLETEDDYSY---HGHLQACSFSAEKAKVYINDSVELTK 360

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y           CSP+ + HAVLLVGYG +  +P
Sbjct: 361 NEQKLAAWLAKKGPISVAINAFGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRSAVP 420

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 421 FWAIKNSWGTDWGEEGYYYLYRGSGACGVNTMASSAVVN 459



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG +  +P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 399  CSPWLIDHAVLLVGYGNRSAVPFWAIKNSWGTDWGEEGYYYLYRGSGACGVNTMASSAVV 458

Query: 1025 D 1025
            +
Sbjct: 459  N 459


>gi|255538808|ref|XP_002510469.1| cysteine protease, putative [Ricinus communis]
 gi|223551170|gb|EEF52656.1| cysteine protease, putative [Ricinus communis]
          Length = 366

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 171/375 (45%), Gaps = 56/375 (14%)

Query: 605 IMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVK 664
           + LI   FL   +        L D +  QVV  V+   +              F AF  K
Sbjct: 7   LSLIVFAFLSSSILFTATSDELDDPLIRQVVPDVEDYLLSAQ---------HHFTAFKAK 57

Query: 665 RGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSE 716
            G+ YA  EE   RF+ FK +  +  KH+       +G ++FSD +P E           
Sbjct: 58  FGKNYATQEEHDYRFKVFKANLRRAQKHQLMDPSAVHGVTKFSDLTPREF---------R 108

Query: 717 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 776
           R Y  +   R   +     +     +P+ +DWR         +Q +CGSCW+FS AG LE
Sbjct: 109 RQYLGLKKLRLPADAHEAPILPTDGIPEDFDWRDHGAVTNVKNQGSCGSCWSFSAAGALE 168

Query: 777 GQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKD 826
           G + + TG+LV  S+ QLV+C  +C         SGC+G     + EY  +A GLE E+D
Sbjct: 169 GAHFLATGELVSLSEQQLVDCDHECDPTEYGACDSGCNGGLMTNAFEYILKAGGLEREED 228

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 886
           YPY  +  ++  C ++++K+        +     + +   L + GPL+V +N+  +  Y 
Sbjct: 229 YPYTGS--DRGPCKFERAKIAASVNNFSVVSVDEDQIAANLVQNGPLAVGINAVFMQTYI 286

Query: 887 GTPIRKNDETCSPYDLG----HAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGF 935
           G           PY       H V+LVGYG       +  + P+W+++NSWG    + G+
Sbjct: 287 GG-------VSCPYICSKRQDHGVVLVGYGSAGYAPVRLKDKPFWIIKNSWGENWGENGY 339

Query: 936 FKIERGNNACGIEQI 950
           +KI RG N CG++ +
Sbjct: 340 YKICRGRNVCGVDAM 354



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 170/375 (45%), Gaps = 55/375 (14%)

Query: 239 IMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVK 298
           + LI   FL   +        L D +  QVV  V+   +              F AF  K
Sbjct: 7   LSLIVFAFLSSSILFTATSDELDDPLIRQVVPDVEDYLLSAQ---------HHFTAFKAK 57

Query: 299 RGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSE 350
            G+ YA  EE   RF+ FK +  +  KH+       +G ++FSD +P E           
Sbjct: 58  FGKNYATQEEHDYRFKVFKANLRRAQKHQLMDPSAVHGVTKFSDLTPREF---------R 108

Query: 351 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 410
           R Y  +   R   +     +     +P+ +DWR         +Q +CGSCW+FS AG LE
Sbjct: 109 RQYLGLKKLRLPADAHEAPILPTDGIPEDFDWRDHGAVTNVKNQGSCGSCWSFSAAGALE 168

Query: 411 GQYAIKTGKLVEFSKSQLVECAKQCS-----GC-GGCDG--LEQPIEYTHQA-GLESEKD 461
           G + + TG+LV  S+ QLV+C  +C       C  GC+G  +    EY  +A GLE E+D
Sbjct: 169 GAHFLATGELVSLSEQQLVDCDHECDPTEYGACDSGCNGGLMTNAFEYILKAGGLEREED 228

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           YPY     ++  C ++++K+        +     + +   L + GPL+VG+N+  +  Y 
Sbjct: 229 YPYT--GSDRGPCKFERAKIAASVNNFSVVSVDEDQIAANLVQNGPLAVGINAVFMQTYI 286

Query: 522 GTPIRKNDETCSPYDLG----HAVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGF 570
           G           PY       H V+LVGYG       +  D P+W+ +NSWG    + G+
Sbjct: 287 GG-------VSCPYICSKRQDHGVVLVGYGSAGYAPVRLKDKPFWIIKNSWGENWGENGY 339

Query: 571 FKIERGNNACGIEQI 585
           +KI RG N CG++ +
Sbjct: 340 YKICRGRNVCGVDAM 354



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR         +Q  CGSCW+FS AG LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 134 IPEDFDWRDHGAVTNVKNQGSCGSCWSFSAAGALEGAHFLATGELVSLSEQQLVDCDHEC 193

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  +A GLE E+DYPY  +  ++  C ++++K+     
Sbjct: 194 DPTEYGACDSGCNGGLMTNAFEYILKAGGLEREEDYPYTGS--DRGPCKFERAKIAASVN 251

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVL 176
              +     + +   L + GPL+V +N+  +  Y G           PY       H V+
Sbjct: 252 NFSVVSVDEDQIAANLVQNGPLAVGINAVFMQTYIGG-------VSCPYICSKRQDHGVV 304

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +  + P+W+++NSWG    + G++KI RG N CG++ +
Sbjct: 305 LVGYGSAGYAPVRLKDKPFWIIKNSWGENWGENGYYKICRGRNVCGVDAM 354



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  A GI  +     I  V     CS     H V+LVGYG       +  D P+W++
Sbjct: 268  VQNGPLAVGINAVFMQTYIGGVSCPYICSKRQ-DHGVVLVGYGSAGYAPVRLKDKPFWII 326

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    + G++KI RG N CG++ +
Sbjct: 327  KNSWGENWGENGYYKICRGRNVCGVDAM 354


>gi|340053968|emb|CCC48262.1| cysteine peptidase, Clan CA, family C1,Cathepsin L-like, fragment,
           partial [Trypanosoma vivax Y486]
          Length = 323

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 147/301 (48%), Gaps = 26/301 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 709
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGRCGSCWSF 146

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKD 826
           S  G +EGQ+A     L   S+  LV C  + +GC G F + + E+    +   + +EK 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKENSGKVYTEKS 206

Query: 827 YPYKNANGEKFKC-AYDKSKVKLFTGK-DFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + +G K  C  Y        TG  D  H    + + K L   GP++V +++     
Sbjct: 207 YPYVSEDGSKPFCIPYGHEVGATITGHVDIPH--DEDAIAKYLADNGPVAVAVDATTFMS 264

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y+G  +     +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N 
Sbjct: 265 YSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQ 320

Query: 945 C 945
           C
Sbjct: 321 C 321



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 143/299 (47%), Gaps = 21/299 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 343
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGRCGSCWSF 146

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKD 461
           S  G +EGQ+A     L   S+  LV C  + +GCGG   D   + I   +   + +EK 
Sbjct: 147 SAIGNIEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKENSGKVYTEKS 206

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
           YPY + +G K  C     +V           +  + + K L   GP++V +++     Y+
Sbjct: 207 YPYVSEDGSKPFCIPYGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATTFMSYS 266

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
           G  +     +C+   L H VLLVGY      PYW+ +NSW     ++G+ +IE+G N C
Sbjct: 267 GGVV----TSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQC 321



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 107/211 (50%), Gaps = 11/211 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCW+FS  G +EGQ+A     L   S+  LV C  
Sbjct: 117 GKAPAAVDWRRKGAVTPVKDQGRCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDF 176

Query: 69  QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKC-AYDKSKVKLFTGK-DF 123
           + +GC G F + + E+    +   + +EK YPY + +G K  C  Y        TG  D 
Sbjct: 177 KDNGCGGGFMDNAFEWIVKENSGKVYTEKSYPYVSEDGSKPFCIPYGHEVGATITGHVDI 236

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            H    + + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY   
Sbjct: 237 PH--DEDAIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDS 290

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
              PYW+++NSW     ++G+ +IE+G N C
Sbjct: 291 SKPPYWIIKNSWSSSWGEKGYIRIEKGTNQC 321



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 31/50 (62%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY      PYW+++NSW     ++G+ +IE+G N C
Sbjct: 272  SCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEKGYIRIEKGTNQC 321


>gi|356530431|ref|XP_003533785.1| PREDICTED: cysteine proteinase [Glycine max]
          Length = 354

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 146/307 (47%), Gaps = 15/307 (4%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 351
           F  F+ + G+ Y ++EE+KER+E F Q+      R+  S    R P  +       W+  
Sbjct: 55  FARFVSRFGKSYQSEEEMKERYEIFSQN-----LRFIRSHNKKRLPYTLSVNHFADWTWE 109

Query: 352 TYER-IVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGM 408
            ++R  +   +     L    K  D  +P   DWRK+ +     DQ +CGSCW FS  G 
Sbjct: 110 EFKRHRLGAAQNCSATLNGNHKLTDAVLPPTKDWRKEGIVSSVKDQGSCGSCWTFSTTGA 169

Query: 409 LEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRN 466
           LE  YA   GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GLE+E+ YPY  
Sbjct: 170 LEAAYAQAFGKSISLSEQQLVDCAGPFNNFGCHGGLPSQAFEYIKYNGGLETEEAYPYTG 229

Query: 467 GNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-HLIHFYNGTP 524
            +G    C +    V +          G+E  +K  +    P+SV     +  HFY    
Sbjct: 230 KDG---VCKFSAENVAVQVLDSVNITLGAEDELKHAVAFVRPVSVAFQVVNGFHFYENGV 286

Query: 525 IRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQ 584
              +    +  D+ HAVL VGYG ++ +PYWL +NSWG    + G+FK+E G N CG+  
Sbjct: 287 FTSDTCGSTSQDVNHAVLAVGYGVENGVPYWLIKNSWGESWGENGYFKMELGKNMCGVAT 346

Query: 585 IAGYATI 591
            A Y  +
Sbjct: 347 CASYPIV 353



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 145/307 (47%), Gaps = 16/307 (5%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 717
           F  F+ + G+ Y ++EE+KER+E F Q+      R+  S    R P  +       W+  
Sbjct: 55  FARFVSRFGKSYQSEEEMKERYEIFSQN-----LRFIRSHNKKRLPYTLSVNHFADWTWE 109

Query: 718 TYER-IVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGM 774
            ++R  +   +     L    K  D  +P   DWRK+ +     DQ +CGSCW FS  G 
Sbjct: 110 EFKRHRLGAAQNCSATLNGNHKLTDAVLPPTKDWRKEGIVSSVKDQGSCGSCWTFSTTGA 169

Query: 775 LEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKN 831
           LE  YA   GK +  S+ QLV+CA   +  GC G     + EY  +  GLE+E+ YPY  
Sbjct: 170 LEAAYAQAFGKSISLSEQQLVDCAGPFNNFGCHGGLPSQAFEYIKYNGGLETEEAYPYTG 229

Query: 832 ANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTP 889
            +G    C +    V +       +     + +K  +    P+SV     +  H Y    
Sbjct: 230 KDG---VCKFSAENVAVQVLDSVNITLGAEDELKHAVAFVRPVSVAFQVVNGFHFYENGV 286

Query: 890 IRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 949
              +    +  D+ HAVL VGYG ++ +PYWL++NSWG    + G+FK+E G N CG+  
Sbjct: 287 FTSDTCGSTSQDVNHAVLAVGYGVENGVPYWLIKNSWGESWGENGYFKMELGKNMCGVAT 346

Query: 950 IAGYATI 956
            A Y  +
Sbjct: 347 CASYPIV 353



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 109/223 (48%), Gaps = 8/223 (3%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRK+ +     DQ  CGSCW FS  G LE  YA   GK +  S+ QLV+CA
Sbjct: 134 DAVLPPTKDWRKEGIVSSVKDQGSCGSCWTFSTTGALEAAYAQAFGKSISLSEQQLVDCA 193

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
              +  GC G     + EY  +  GLE+E+ YPY   +G    C +    V +       
Sbjct: 194 GPFNNFGCHGGLPSQAFEYIKYNGGLETEEAYPYTGKDG---VCKFSAENVAVQVLDSVN 250

Query: 124 LHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +     + +K  +    P+SV     +  H Y       +    +  D+ HAVL VGYG 
Sbjct: 251 ITLGAEDELKHAVAFVRPVSVAFQVVNGFHFYENGVFTSDTCGSTSQDVNHAVLAVGYGV 310

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           ++ +PYWL++NSWG    + G+FK+E G N CG+   A Y  +
Sbjct: 311 ENGVPYWLIKNSWGESWGENGYFKMELGKNMCGVATCASYPIV 353


>gi|113819972|gb|AAH04054.2| Ctsf protein [Mus musculus]
          Length = 332

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 145/310 (46%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 35  FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 92

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 93  -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 145

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+E DY
Sbjct: 146 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGLPSNAYAAIKNLGGLETEDDY 205

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
            Y+   G    C +     K++             +   L + GP+SV +N+  + FY  
Sbjct: 206 GYQ---GHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRH 262

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
                    CSP+ + HAVLLVGYG + +IPYW  +NSWG    +EG++ + RG+ ACG+
Sbjct: 263 GIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGV 322

Query: 583 EQIAGYATID 592
             +A  A ++
Sbjct: 323 NTMASSAVVN 332



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 35  FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 92

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 93  -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 145

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEK 825
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y    +  GLE+E 
Sbjct: 146 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGL--PSNAYAAIKNLGGLETED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DY Y+   G    C +     K++             +   L + GP+SV +N+  +  Y
Sbjct: 204 DYGYQ---GHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFY 260

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                      CSP+ + HAVLLVGYG + NIPYW ++NSWG    +EG++ + RG+ AC
Sbjct: 261 RHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGAC 320

Query: 946 GIEQIAGYATID 957
           G+  +A  A ++
Sbjct: 321 GVNTMASSAVVN 332



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 114/219 (52%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWRKK       +Q  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 119 APPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVD 178

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y    +  GLE+E DY Y+   G    C +     K++         
Sbjct: 179 KACLGGL--PSNAYAAIKNLGGLETEDDYGYQ---GHVQTCNFSAQMAKVYINDSVELSR 233

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIP
Sbjct: 234 NENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIP 293

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 294 YWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVVN 332



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + +IPYW ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 272  CSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVV 331

Query: 1025 D 1025
            +
Sbjct: 332  N 332


>gi|4826565|emb|CAB42884.1| cathepsin F [Mus musculus]
          Length = 462

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 145/310 (46%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 275

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+E DY
Sbjct: 276 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGLPSNAYAAIKNLGGLETEDDY 335

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
            Y+   G    C +     K++             +   L + GP+SV +N+  + FY  
Sbjct: 336 GYQ---GHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRH 392

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
                    CSP+ + HAVLLVGYG + +IPYW  +NSWG    +EG++ + RG+ ACG+
Sbjct: 393 GIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGV 452

Query: 583 EQIAGYATID 592
             +A  A ++
Sbjct: 453 NTMASSAVVN 462



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 275

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEK 825
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y    +  GLE+E 
Sbjct: 276 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGL--PSNAYAAIKNLGGLETED 333

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DY Y+   G    C +     K++             +   L + GP+SV +N+  +  Y
Sbjct: 334 DYGYQ---GHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFY 390

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                      CSP+ + HAVLLVGYG + NIPYW ++NSWG    +EG++ + RG+ AC
Sbjct: 391 RHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGAC 450

Query: 946 GIEQIAGYATID 957
           G+  +A  A ++
Sbjct: 451 GVNTMASSAVVN 462



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 114/219 (52%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWRKK       +Q  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 249 APPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVD 308

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y    +  GLE+E DY Y+   G    C +     K++         
Sbjct: 309 KACLGGL--PSNAYAAIKNLGGLETEDDYGYQ---GHVQTCNFSAQMAKVYINDSVELSR 363

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIP
Sbjct: 364 NENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIP 423

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 424 YWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVVN 462



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + +IPYW ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 402  CSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVV 461

Query: 1025 D 1025
            +
Sbjct: 462  N 462


>gi|348564702|ref|XP_003468143.1| PREDICTED: cathepsin F-like [Cavia porcellus]
          Length = 462

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 147/315 (46%), Gaps = 23/315 (7%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPE 338
           I   FK F+    R Y + EE + R   F          Q   +   +YG ++FSD + E
Sbjct: 161 IASLFKKFVATYNRTYESKEETQWRLSVFTRNMILAQKIQALDRGTAQYGVTKFSDLTEE 220

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E           RT       RE   K + + +      P  WDWRKK       +Q  C
Sbjct: 221 EF----------RTIYLNPLLREHPSKTMRQAKIVHDSAPPEWDWRKKGAVTEVKNQGMC 270

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLE 457
           GSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K    C G   +          GLE
Sbjct: 271 GSCWAFSVTGNVEGQWFLKKGTLLSLSEQELLDCDKVDKACMGGLPINAYSAIKSLGGLE 330

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
           +E DY Y+   G    C +   K K++           + +   L   GP+S+ +N+  +
Sbjct: 331 TEDDYSYQ---GHMEACNFSAKKAKVYINDSVELSKNEQYLAAWLAVKGPISIAINAFGM 387

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY           CSP+ + HA+L+VGYGK+  +P+W  +NSWG    +EG++ + RG+
Sbjct: 388 QFYRHGIAHPLQPLCSPWFIDHAMLIVGYGKRSGVPFWAIKNSWGTDWGEEGYYYLHRGS 447

Query: 578 NACGIEQIAGYATID 592
            +CG+  +A  A ++
Sbjct: 448 RSCGVNVMASSAVVE 462



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 149/317 (47%), Gaps = 28/317 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPE 704
           I   FK F+    R Y + EE + R   F          Q   +   +YG ++FSD + E
Sbjct: 161 IASLFKKFVATYNRTYESKEETQWRLSVFTRNMILAQKIQALDRGTAQYGVTKFSDLTEE 220

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E           RT       RE   K + + +      P  WDWRKK       +Q  C
Sbjct: 221 EF----------RTIYLNPLLREHPSKTMRQAKIVHDSAPPEWDWRKKGAVTEVKNQGMC 270

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAG 820
           GSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K    C G    P   Y+      G
Sbjct: 271 GSCWAFSVTGNVEGQWFLKKGTLLSLSEQELLDCDKVDKACMGGL--PINAYSAIKSLGG 328

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           LE+E DY Y+   G    C +   K K++           + +   L   GP+S+ +N+ 
Sbjct: 329 LETEDDYSYQ---GHMEACNFSAKKAKVYINDSVELSKNEQYLAAWLAVKGPISIAINAF 385

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +  Y           CSP+ + HA+L+VGYGK+  +P+W ++NSWG    +EG++ + R
Sbjct: 386 GMQFYRHGIAHPLQPLCSPWFIDHAMLIVGYGKRSGVPFWAIKNSWGTDWGEEGYYYLHR 445

Query: 941 GNNACGIEQIAGYATID 957
           G+ +CG+  +A  A ++
Sbjct: 446 GSRSCGVNVMASSAVVE 462



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 115/219 (52%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWRKK       +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +L++C K  
Sbjct: 249 APPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLKKGTLLSLSEQELLDCDKVD 308

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    P   Y+      GLE+E DY Y+   G    C +   K K++         
Sbjct: 309 KACMGGL--PINAYSAIKSLGGLETEDDYSYQ---GHMEACNFSAKKAKVYINDSVELSK 363

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L   GP+S+ +N+  +  Y           CSP+ + HA+L+VGYGK+  +P
Sbjct: 364 NEQYLAAWLAVKGPISIAINAFGMQFYRHGIAHPLQPLCSPWFIDHAMLIVGYGKRSGVP 423

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    +EG++ + RG+ +CG+  +A  A ++
Sbjct: 424 FWAIKNSWGTDWGEEGYYYLHRGSRSCGVNVMASSAVVE 462



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HA+L+VGYGK+  +P+W ++NSWG    +EG++ + RG+ +CG+  +A  A +
Sbjct: 402  CSPWFIDHAMLIVGYGKRSGVPFWAIKNSWGTDWGEEGYYYLHRGSRSCGVNVMASSAVV 461

Query: 1025 D 1025
            +
Sbjct: 462  E 462


>gi|388513209|gb|AFK44666.1| unknown [Lotus japonicus]
 gi|388514955|gb|AFK45539.1| unknown [Lotus japonicus]
          Length = 352

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 36/318 (11%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  K G++Y + EEI+ RF  F ++       +KK   Y  G + F+D S      
Sbjct: 52  SFARFASKYGKRYDSVEEIQHRFRIFSENLELIKSTNKKRLSYKLGLNHFADLS------ 105

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
                W E   +++ A +     ++   +  D  +P   DWRK+++     DQA CGSCW
Sbjct: 106 -----WDEFRTQKLGAAQNCSATLIGNHKLTDAVLPAEKDWRKESIVSEVKDQAHCGSCW 160

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESE 824
            FS  G LE  YA   GK +  S+ QLV+CA   +  GC+G     + EY  +  G+  E
Sbjct: 161 TFSTTGALEAAYAQAHGKNISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKYNGGIALE 220

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           K+YPY  A  E  K   +   V++    + +     + +K  +    P+SV         
Sbjct: 221 KEYPY-TAKDEACKFTAENVAVRVLDSVN-ITLGAEDELKHAVAFARPVSVAFQV----- 273

Query: 885 YNGTPIRK----NDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            +G  + K      +TC  +P D+ HAVL VGYG ++N+PYW+++NSWG    D G+FK+
Sbjct: 274 VDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVENNVPYWIIKNSWGSTWGDHGYFKM 333

Query: 939 ERGNNACGIEQIAGYATI 956
           E G N CG+   A Y  +
Sbjct: 334 ELGKNMCGVATCASYPIV 351



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 153/318 (48%), Gaps = 35/318 (11%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  K G++Y + EEI+ RF  F ++       +KK   Y  G + F+D S      
Sbjct: 52  SFARFASKYGKRYDSVEEIQHRFRIFSENLELIKSTNKKRLSYKLGLNHFADLS------ 105

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
                W E   +++ A +     ++   +  D  +P   DWRK+++     DQA CGSCW
Sbjct: 106 -----WDEFRTQKLGAAQNCSATLIGNHKLTDAVLPAEKDWRKESIVSEVKDQAHCGSCW 160

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESE 459
            FS  G LE  YA   GK +  S+ QLV+CA   +  G   GL  Q  EY  +  G+  E
Sbjct: 161 TFSTTGALEAAYAQAHGKNISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKYNGGIALE 220

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
           K+YPY     E  K   +   V++    + +     + +K  +    P+SV         
Sbjct: 221 KEYPY-TAKDEACKFTAENVAVRVLDSVN-ITLGAEDELKHAVAFARPVSVAF-----QV 273

Query: 520 YNGTPIRK----NDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
            +G  + K      +TC  +P D+ HAVL VGYG ++++PYW+ +NSWG    D G+FK+
Sbjct: 274 VDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVENNVPYWIIKNSWGSTWGDHGYFKM 333

Query: 574 ERGNNACGIEQIAGYATI 591
           E G N CG+   A Y  +
Sbjct: 334 ELGKNMCGVATCASYPIV 351



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRK+++     DQA CGSCW FS  G LE  YA   GK +  S+ QLV+CA
Sbjct: 132 DAVLPAEKDWRKESIVSEVKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQQLVDCA 191

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
              +  GC+G     + EY  +  G+  EK+YPY  A  E  K   +   V++    + +
Sbjct: 192 GAFNNFGCNGGLPSQAFEYIKYNGGIALEKEYPY-TAKDEACKFTAENVAVRVLDSVN-I 249

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETC--SPYDLGHAVLLV 178
                + +K  +    P+SV          +G  + K      +TC  +P D+ HAVL V
Sbjct: 250 TLGAEDELKHAVAFARPVSVAFQV-----VDGFRLYKEGVYTSDTCGNTPMDVNHAVLAV 304

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GYG ++N+PYW+++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 305 GYGVENNVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCASYPIV 351



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V   +TC  +P D+ HAVL VGYG ++++PYW+++NSWG    D G+FK+E G N CG+ 
Sbjct: 284  VYTSDTCGNTPMDVNHAVLAVGYGVENNVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVA 343

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 344  TCASYPIV 351


>gi|340503366|gb|EGR29962.1| hypothetical protein IMG5_145110 [Ichthyophthirius multifiliis]
          Length = 1095

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 151/273 (55%), Gaps = 18/273 (6%)

Query: 327  YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD----GPVPDAWDW 382
            +G ++FSD SP++   +   K +++   +++  +++ +K+   +++D      VP+ +DW
Sbjct: 834  FGHTKFSDLSPQQ-FAQKHLKLNQK---KLLQVKKETKKLTTPIQQDITVEENVPEQFDW 889

Query: 383  RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCD 442
            R +NV      Q  CGSCW FS  G++E QYAIK  KLV FS+ QLV+C     GC G  
Sbjct: 890  RDRNVVTEPKYQNTCGSCWTFSTTGVIESQYAIKHQKLVPFSEQQLVDCDDINDGCHGG- 948

Query: 443  GLEQPIEYTHQA-GLESEKDY-PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKK 500
             +    +Y  Q+ GLE  +DY  Y+N   +K KC +D +KV+    +        E +KK
Sbjct: 949  LMTDAYKYLQQSGGLEFAEDYGDYKN---KKEKCKFDLNKVQAKIKEWQQIDEDEEIIKK 1005

Query: 501  ILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIPYWLARN 559
             LY+ GP++ G+N+ L+ FY        D      D+ HA+L+VGYG ++D   YW+ +N
Sbjct: 1006 QLYQNGPIAAGVNARLLQFYKSGIF---DPKECDSDINHAILIVGYGVEKDGQKYWIIKN 1062

Query: 560  SWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
             WG     +G+FK+ RG   CGI   A  A I+
Sbjct: 1063 QWGKDWGMDGYFKLARGKKQCGIHTYASIAFIE 1095



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 19/273 (6%)

Query: 693  YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD----GPVPDAWDW 748
            +G ++FSD SP++   +   K +++   +++  +++ +K+   +++D      VP+ +DW
Sbjct: 834  FGHTKFSDLSPQQ-FAQKHLKLNQK---KLLQVKKETKKLTTPIQQDITVEENVPEQFDW 889

Query: 749  RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF 808
            R +NV      Q  CGSCW FS  G++E QYAIK  KLV FS+ QLV+C     GC G  
Sbjct: 890  RDRNVVTEPKYQNTCGSCWTFSTTGVIESQYAIKHQKLVPFSEQQLVDCDDINDGCHGGL 949

Query: 809  FEPSIEYTHQA-GLESEKDY-PYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSETMKK 865
               + +Y  Q+ GLE  +DY  YKN   +K KC +D +KV+    K++   +   E +KK
Sbjct: 950  MTDAYKYLQQSGGLEFAEDYGDYKN---KKEKCKFDLNKVQAKI-KEWQQIDEDEEIIKK 1005

Query: 866  ILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRN 924
             LY+ GP++  +N+ L+  Y        D      D+ HA+L+VGYG ++D   YW+++N
Sbjct: 1006 QLYQNGPIAAGVNARLLQFYKSGIF---DPKECDSDINHAILIVGYGVEKDGQKYWIIKN 1062

Query: 925  SWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
             WG     +G+FK+ RG   CGI   A  A I+
Sbjct: 1063 QWGKDWGMDGYFKLARGKKQCGIHTYASIAFIE 1095



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 124/220 (56%), Gaps = 11/220 (5%)

Query: 11   VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            VP+ +DWR +NV      Q  CGSCW FS  G++E QYAIK  KLV FS+ QLV+C    
Sbjct: 883  VPEQFDWRDRNVVTEPKYQNTCGSCWTFSTTGVIESQYAIKHQKLVPFSEQQLVDCDDIN 942

Query: 71   SGCDGCFFEPSIEYTHQA-GLESEKDY-PYKNANGEKFKCAYDKSKVKLFTGKDFLHFN- 127
             GC G     + +Y  Q+ GLE  +DY  YKN   +K KC +D +KV+    K++   + 
Sbjct: 943  DGCHGGLMTDAYKYLQQSGGLEFAEDYGDYKN---KKEKCKFDLNKVQAKI-KEWQQIDE 998

Query: 128  GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNI 186
              E +KK LY+ GP++  +N+ L+  Y        D      D+ HA+L+VGYG ++D  
Sbjct: 999  DEEIIKKQLYQNGPIAAGVNARLLQFYKSGIF---DPKECDSDINHAILIVGYGVEKDGQ 1055

Query: 187  PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
             YW+++N WG     +G+FK+ RG   CGI   A  A I+
Sbjct: 1056 KYWIIKNQWGKDWGMDGYFKLARGKKQCGIHTYASIAFIE 1095



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)

Query: 969  DLGHAVLLVGYG-KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            D+ HA+L+VGYG ++D   YW+++N WG     +G+FK+ RG   CGI   A  A I+
Sbjct: 1038 DINHAILIVGYGVEKDGQKYWIIKNQWGKDWGMDGYFKLARGKKQCGIHTYASIAFIE 1095


>gi|9845246|ref|NP_063914.1| cathepsin F precursor [Mus musculus]
 gi|12643321|sp|Q9R013.1|CATF_MOUSE RecName: Full=Cathepsin F; Flags: Precursor
 gi|6467384|gb|AAF13147.1|AF136280_1 cathepsin F precursor [Mus musculus]
 gi|7141165|gb|AAF37228.1|AF217224_1 cathepsin F [Mus musculus]
 gi|26344728|dbj|BAC36013.1| unnamed protein product [Mus musculus]
 gi|37589148|gb|AAH58758.1| Cathepsin F [Mus musculus]
 gi|148701127|gb|EDL33074.1| cathepsin F, isoform CRA_b [Mus musculus]
          Length = 462

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 145/310 (46%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 275

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+E DY
Sbjct: 276 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGLPSNAYAAIKNLGGLETEDDY 335

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
            Y+   G    C +     K++             +   L + GP+SV +N+  + FY  
Sbjct: 336 GYQ---GHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRH 392

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
                    CSP+ + HAVLLVGYG + +IPYW  +NSWG    +EG++ + RG+ ACG+
Sbjct: 393 GIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGV 452

Query: 583 EQIAGYATID 592
             +A  A ++
Sbjct: 453 NTMASSAVVN 462



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 275

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEK 825
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y    +  GLE+E 
Sbjct: 276 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGL--PSNAYAAIKNLGGLETED 333

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DY Y+   G    C +     K++             +   L + GP+SV +N+  +  Y
Sbjct: 334 DYGYQ---GHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFY 390

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                      CSP+ + HAVLLVGYG + NIPYW ++NSWG    +EG++ + RG+ AC
Sbjct: 391 RHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGAC 450

Query: 946 GIEQIAGYATID 957
           G+  +A  A ++
Sbjct: 451 GVNTMASSAVVN 462



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 114/219 (52%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWRKK       +Q  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 249 APPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVD 308

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y    +  GLE+E DY Y+   G    C +     K++         
Sbjct: 309 KACLGGL--PSNAYAAIKNLGGLETEDDYGYQ---GHVQTCNFSAQMAKVYINDSVELSR 363

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIP
Sbjct: 364 NENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIP 423

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 424 YWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVVN 462



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + +IPYW ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 402  CSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVV 461

Query: 1025 D 1025
            +
Sbjct: 462  N 462


>gi|66730453|ref|NP_001019413.1| cathepsin W precursor [Rattus norvegicus]
 gi|62531092|gb|AAH93401.1| Cathepsin W [Rattus norvegicus]
 gi|149062072|gb|EDM12495.1| cathepsin W [Rattus norvegicus]
          Length = 371

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 174/344 (50%), Gaps = 42/344 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y+N  E   R   F     Q    + E  GT+EF     SD + EE 
Sbjct: 38  EVFKLFQIQFNRSYSNPAEYTRRLGIFAHNLAQAQRLQEEDLGTAEFGQTPFSDLTEEEF 97

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRK-KNVTGPAGDQAACG 764
               G    +R  ERI+   +KV+      E+ G  VP   DWRK KN+     +Q  C 
Sbjct: 98  GQLYGH---QRAPERILNMAKKVKS-----ERWGESVPPTCDWRKVKNIISSIKNQGNCR 149

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLES 823
            CWA + A  ++  + IKT + V+ S  +L++C +  +GC+G F ++  I   + +GL S
Sbjct: 150 CCWAIAAADNIQTLWRIKTQQFVDVSVQELLDCDRCGNGCNGGFVWDAYITVLNNSGLAS 209

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           E+DYP++  + +  +C  DK + K+   +DF   + +E  +   L  +GP++V +N  L+
Sbjct: 210 EEDYPFQ-GHQKPHRCLADKYR-KVAWIQDFTMLSSNEQVIAGYLAIHGPITVTINMKLL 267

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-----------------NIPYWLVRNS 925
             Y    I+    TC P+ + H+VLLVG+GK+                  + PYW+++NS
Sbjct: 268 QYYQKGVIKATPSTCDPHLVNHSVLLVGFGKEKGGMQTGTLLSHSRKPRRSTPYWILKNS 327

Query: 926 WGPIGPDEGFFKIERGNNACGIEQIAGYATID--VVKNDETCSP 967
           WG    ++G+F++ RGNN CGI +    A +D  V K   +C P
Sbjct: 328 WGAEWGEKGYFRLYRGNNTCGIAKYPITARVDRPVKKAPVSCPP 371



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 169/337 (50%), Gaps = 39/337 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y+N  E   R   F     Q    + E  GT+EF     SD + EE 
Sbjct: 38  EVFKLFQIQFNRSYSNPAEYTRRLGIFAHNLAQAQRLQEEDLGTAEFGQTPFSDLTEEEF 97

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRK-KNVTGPAGDQAACG 398
               G    +R  ERI+   +KV+      E+ G  VP   DWRK KN+     +Q  C 
Sbjct: 98  GQLYGH---QRAPERILNMAKKVKS-----ERWGESVPPTCDWRKVKNIISSIKNQGNCR 149

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
            CWA + A  ++  + IKT + V+ S  +L++C +  +GC G    +  I   + +GL S
Sbjct: 150 CCWAIAAADNIQTLWRIKTQQFVDVSVQELLDCDRCGNGCNGGFVWDAYITVLNNSGLAS 209

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLI 517
           E+DYP++ G+ +  +C  DK + K+   +DF   + +E  +   L  +GP++V +N  L+
Sbjct: 210 EEDYPFQ-GHQKPHRCLADKYR-KVAWIQDFTMLSSNEQVIAGYLAIHGPITVTINMKLL 267

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-----------------DIPYWLARNS 560
            +Y    I+    TC P+ + H+VLLVG+GK+                    PYW+ +NS
Sbjct: 268 QYYQKGVIKATPSTCDPHLVNHSVLLVGFGKEKGGMQTGTLLSHSRKPRRSTPYWILKNS 327

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQR 597
           WG    ++G+F++ RGNN CGI +    A +D  +++
Sbjct: 328 WGAEWGEKGYFRLYRGNNTCGIAKYPITARVDRPVKK 364



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 133/241 (55%), Gaps = 22/241 (9%)

Query: 11  VPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           VP   DWRK KN+     +Q +C  CWA + A  ++  + IKT + V+ S  +L++C + 
Sbjct: 126 VPPTCDWRKVKNIISSIKNQGNCRCCWAIAAADNIQTLWRIKTQQFVDVSVQELLDCDRC 185

Query: 70  CSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
            +GC+G F ++  I   + +GL SE+DYP++  + +  +C  DK + K+   +DF   + 
Sbjct: 186 GNGCNGGFVWDAYITVLNNSGLASEEDYPFQ-GHQKPHRCLADKYR-KVAWIQDFTMLSS 243

Query: 129 SE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD--- 184
           +E  +   L  +GP++V +N  L+  Y    I+    TC P+ + H+VLLVG+GK+    
Sbjct: 244 NEQVIAGYLAIHGPITVTINMKLLQYYQKGVIKATPSTCDPHLVNHSVLLVGFGKEKGGM 303

Query: 185 --------------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQ 230
                         + PYW+++NSWG    ++G+F++ RGNN CGI +    A +D  ++
Sbjct: 304 QTGTLLSHSRKPRRSTPYWILKNSWGAEWGEKGYFRLYRGNNTCGIAKYPITARVDRPVK 363

Query: 231 R 231
           +
Sbjct: 364 K 364



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 17/79 (21%)

Query: 964  TCSPYDLGHAVLLVGYGKQD-----------------DIPYWLVRNSWGPIGPDEGFFKI 1006
            TC P+ + H+VLLVG+GK+                    PYW+++NSWG    ++G+F++
Sbjct: 281  TCDPHLVNHSVLLVGFGKEKGGMQTGTLLSHSRKPRRSTPYWILKNSWGAEWGEKGYFRL 340

Query: 1007 ERGNNACGIEQIAGYATID 1025
             RGNN CGI +    A +D
Sbjct: 341  YRGNNTCGIAKYPITARVD 359


>gi|96979798|ref|YP_611001.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|37077647|sp|Q91CL9.1|CATV_NPVAP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|16041073|dbj|BAB69773.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|94983331|gb|ABF50271.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|146229694|gb|ABQ12259.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
          Length = 324

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 159/306 (51%), Gaps = 32/306 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 709
           F+ F+ K  + Y+++ E   RF+ F+        ++ +    +Y  ++FSD S +E + K
Sbjct: 28  FEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISK 87

Query: 710 -TGFKW---SERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
            TG       +   E +V DR             GP+   +DWR+ N      +Q  CG+
Sbjct: 88  YTGLSLPLQKQNFCEVVVLDRPP---------DKGPL--EFDWRRLNKVTSVKNQGMCGA 136

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESE 824
           CWAF+  G LE Q+AIK  +L+  S+ QL++C     GCDG     + E   +  G+++E
Sbjct: 137 CWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDVGCDGGLLHTAYEAVMNMGGIQAE 196

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSETMKKILYKYGPLSVLLNSDLIH 883
            DYPY+  NG    C  + +K  +   K + +     E +K +L   GP+ V +++  I 
Sbjct: 197 NDYPYEANNG---PCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIV 253

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
            Y    IR     C  + L HAVLLVGYG ++ IP+W+++N+WG    ++G+F++++  N
Sbjct: 254 GYKRGIIR----YCENHGLNHAVLLVGYGVENGIPFWILKNTWGADWGEQGYFRVQQNIN 309

Query: 944 ACGIEQ 949
           ACGI+ 
Sbjct: 310 ACGIKN 315



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 154/306 (50%), Gaps = 31/306 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 343
           F+ F+ K  + Y+++ E   RF+ F+        ++ +    +Y  ++FSD S +E + K
Sbjct: 28  FEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISK 87

Query: 344 -TGFKW---SERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
            TG       +   E +V DR             GP+   +DWR+ N      +Q  CG+
Sbjct: 88  YTGLSLPLQKQNFCEVVVLDRPP---------DKGPL--EFDWRRLNKVTSVKNQGMCGA 136

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWAF+  G LE Q+AIK  +L+  S+ QL++C     GC G           +  G+++E
Sbjct: 137 CWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDVGCDGGLLHTAYEAVMNMGGIQAE 196

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN-GSETMKKILYKYGPLSVGLNSHLIH 518
            DYPY   NG    C  + +K  +   K + Y     E +K +L   GP+ V +++  I 
Sbjct: 197 NDYPYEANNG---PCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIV 253

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    IR     C  + L HAVLLVGYG ++ IP+W+ +N+WG    ++G+F++++  N
Sbjct: 254 GYKRGIIR----YCENHGLNHAVLLVGYGVENGIPFWILKNTWGADWGEQGYFRVQQNIN 309

Query: 579 ACGIEQ 584
           ACGI+ 
Sbjct: 310 ACGIKN 315



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 118/209 (56%), Gaps = 9/209 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ QL++C     
Sbjct: 114 PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDV 173

Query: 72  GCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GS 129
           GCDG     + E   +  G+++E DYPY+  NG    C  + +K  +   K + +     
Sbjct: 174 GCDGGLLHTAYEAVMNMGGIQAENDYPYEANNG---PCRVNAAKFVVRVKKCYRYVTLFE 230

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           E +K +L   GP+ V +++  I  Y    IR     C  + L HAVLLVGYG ++ IP+W
Sbjct: 231 EKLKDLLRIVGPIPVAIDASDIVGYKRGIIR----YCENHGLNHAVLLVGYGVENGIPFW 286

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           +++N+WG    ++G+F++++  NACGI+ 
Sbjct: 287 ILKNTWGADWGEQGYFRVQQNINACGIKN 315



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 40/53 (75%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 1017
            C  + L HAVLLVGYG ++ IP+W+++N+WG    ++G+F++++  NACGI+ 
Sbjct: 263  CENHGLNHAVLLVGYGVENGIPFWILKNTWGADWGEQGYFRVQQNINACGIKN 315


>gi|2511695|emb|CAB17077.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 377

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 171/381 (44%), Gaps = 62/381 (16%)

Query: 613 LLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAFIVKRGRQY 669
           L C     L L +LT     Q         I   L   +  +L T   F  F+   G++Y
Sbjct: 9   LTCFARISLVLFALTLSSARQTTVH----DIAKKLKLQDNQLLRTEKKFNVFMENYGKKY 64

Query: 670 ANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEIL-----CKTGFKWSE 716
           +  EE  +R E F  +  +  E         +G ++FSD + +E          GF W+ 
Sbjct: 65  STREEYLQRLEIFAGNMLRAPENQALDPTAIHGVTQFSDLTEDEFQRHYTGVNGGFPWNN 124

Query: 717 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 776
               R VA   KV+ +          P+ +DWR+K        Q  CGSCWAFS  G +E
Sbjct: 125 GV--RDVAPPLKVDGL----------PEDFDWREKGAVTEVKMQGKCGSCWAFSTTGSIE 172

Query: 777 GQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKD 826
           G   I TGKL+  S+ QLV+C  QC         +GC G     + +Y  Q+ GLE E  
Sbjct: 173 GANFIATGKLLNLSEQQLVDCDSQCDITESTTCDNGCMGGLMTNAYKYLLQSGGLEEESS 232

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDY 885
           YPY  A GE   C +D  KV +    +F +    E  +   L K+GPL+V LN+  +  Y
Sbjct: 233 YPYTGAKGE---CKFDPGKVAVRI-TNFTNIPVDENQIAAYLVKHGPLAVGLNAIFMQTY 288

Query: 886 NG---TPIRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGF 935
            G    P+      CS   L H VLLVGY        +  N PYW+++NSWG     +G+
Sbjct: 289 IGGVSCPL-----ICSKKWLNHGVLLVGYRAKGFSILRLGNKPYWIIKNSWGKRWGVDGY 343

Query: 936 FKIERGNNACGIEQIAGYATI 956
           +K+ RG+  CG+  +   A +
Sbjct: 344 YKLCRGHGMCGMNTMVSTAMV 364



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 170/381 (44%), Gaps = 61/381 (16%)

Query: 247 LLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAFIVKRGRQY 303
           L C     L L +LT     Q         I   L   +  +L T   F  F+   G++Y
Sbjct: 9   LTCFARISLVLFALTLSSARQTTVH----DIAKKLKLQDNQLLRTEKKFNVFMENYGKKY 64

Query: 304 ANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEIL-----CKTGFKWSE 350
           +  EE  +R E F  +  +  E         +G ++FSD + +E          GF W+ 
Sbjct: 65  STREEYLQRLEIFAGNMLRAPENQALDPTAIHGVTQFSDLTEDEFQRHYTGVNGGFPWNN 124

Query: 351 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 410
               R VA   KV+ +          P+ +DWR+K        Q  CGSCWAFS  G +E
Sbjct: 125 GV--RDVAPPLKVDGL----------PEDFDWREKGAVTEVKMQGKCGSCWAFSTTGSIE 172

Query: 411 GQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEYTHQA-GLESEKD 461
           G   I TGKL+  S+ QLV+C  QC     + C  GC G  +    +Y  Q+ GLE E  
Sbjct: 173 GANFIATGKLLNLSEQQLVDCDSQCDITESTTCDNGCMGGLMTNAYKYLLQSGGLEEESS 232

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFY 520
           YPY    GE   C +D  KV +    +F      E  +   L K+GPL+VGLN+  +  Y
Sbjct: 233 YPYTGAKGE---CKFDPGKVAVRI-TNFTNIPVDENQIAAYLVKHGPLAVGLNAIFMQTY 288

Query: 521 NG---TPIRKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGF 570
            G    P+      CS   L H VLLVGY        +  + PYW+ +NSWG     +G+
Sbjct: 289 IGGVSCPL-----ICSKKWLNHGVLLVGYRAKGFSILRLGNKPYWIIKNSWGKRWGVDGY 343

Query: 571 FKIERGNNACGIEQIAGYATI 591
           +K+ RG+  CG+  +   A +
Sbjct: 344 YKLCRGHGMCGMNTMVSTAMV 364



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 120/236 (50%), Gaps = 30/236 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K        Q  CGSCWAFS  G +EG   I TGKL+  S+ QLV+C  QC
Sbjct: 138 LPEDFDWREKGAVTEVKMQGKCGSCWAFSTTGSIEGANFIATGKLLNLSEQQLVDCDSQC 197

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC G     + +Y  Q+ GLE E  YPY  A GE   C +D  KV +   
Sbjct: 198 DITESTTCDNGCMGGLMTNAYKYLLQSGGLEEESSYPYTGAKGE---CKFDPGKVAVRI- 253

Query: 121 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 176
            +F +    E  +   L K+GPL+V LN+  +  Y G    P+      CS   L H VL
Sbjct: 254 TNFTNIPVDENQIAAYLVKHGPLAVGLNAIFMQTYIGGVSCPL-----ICSKKWLNHGVL 308

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           LVGY        +  N PYW+++NSWG     +G++K+ RG+  CG+  +   A +
Sbjct: 309 LVGYRAKGFSILRLGNKPYWIIKNSWGKRWGVDGYYKLCRGHGMCGMNTMVSTAMV 364


>gi|357438145|ref|XP_003589348.1| Cysteine proteinase [Medicago truncatula]
 gi|355478396|gb|AES59599.1| Cysteine proteinase [Medicago truncatula]
          Length = 364

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 164/341 (48%), Gaps = 43/341 (12%)

Query: 639 DTLAIEGSLTFDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER- 692
           D L I   +    ++IL     F +F  K  + YA  EE   RF  FK +    K H++ 
Sbjct: 29  DDLLIRQVVDTAEDHILNAEHHFTSFKSKFSKNYATKEEHDYRFGVFKSNLIKAKLHQKL 88

Query: 693 -----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 747
                +G ++FSD +  E   +     ++R   R+ A  +K       +     +P+ +D
Sbjct: 89  DPSAQHGITKFSDLTASEFR-RQFLGLNKRL--RLPAHAQKAP-----ILPTNNLPEDFD 140

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------ 801
           WR+K    P  DQ +CGSCWAFS  G LEG   + TGKL   S+ QLV+C   C      
Sbjct: 141 WREKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLTSLSEQQLVDCDHVCDPEERG 200

Query: 802 ---SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
              SGC+G     + EY  Q+ G+ SEKDY Y   +G    C +DKSKV        +  
Sbjct: 201 SCDSGCNGGLMNNAFEYILQSGGVVSEKDYAYTGRDGS---CKFDKSKVVASVSNFSVVS 257

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYG---- 912
              + +   L K GPL+V +N+  +  Y +G         C+   L H VLL+G+G    
Sbjct: 258 LDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSC---PYICAKARLDHGVLLLGFGQGGY 314

Query: 913 ---KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
              +    PYW+++NSWG    +EG++KI RG N CG++ +
Sbjct: 315 APIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNVCGVDSM 355



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 164/341 (48%), Gaps = 42/341 (12%)

Query: 273 DTLAIEGSLTFDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER- 326
           D L I   +    ++IL     F +F  K  + YA  EE   RF  FK +    K H++ 
Sbjct: 29  DDLLIRQVVDTAEDHILNAEHHFTSFKSKFSKNYATKEEHDYRFGVFKSNLIKAKLHQKL 88

Query: 327 -----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 381
                +G ++FSD +  E   +     ++R   R+ A  +K       +     +P+ +D
Sbjct: 89  DPSAQHGITKFSDLTASEFR-RQFLGLNKRL--RLPAHAQKAP-----ILPTNNLPEDFD 140

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------ 435
           WR+K    P  DQ +CGSCWAFS  G LEG   + TGKL   S+ QLV+C   C      
Sbjct: 141 WREKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLTSLSEQQLVDCDHVCDPEERG 200

Query: 436 SGCGGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
           S   GC+G  +    EY  Q+ G+ SEKDY Y   +G    C +DKSKV        +  
Sbjct: 201 SCDSGCNGGLMNNAFEYILQSGGVVSEKDYAYTGRDGS---CKFDKSKVVASVSNFSVVS 257

Query: 493 NGSETMKKILYKYGPLSVGLNSHLIHFY-NGTPIRKNDETCSPYDLGHAVLLVGYG---- 547
              + +   L K GPL+V +N+  +  Y +G         C+   L H VLL+G+G    
Sbjct: 258 LDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSC---PYICAKARLDHGVLLLGFGQGGY 314

Query: 548 ---KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
              +  + PYW+ +NSWG    +EG++KI RG N CG++ +
Sbjct: 315 APIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNVCGVDSM 355



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 118/227 (51%), Gaps = 24/227 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K    P  DQ  CGSCWAFS  G LEG   + TGKL   S+ QLV+C   C
Sbjct: 135 LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLTSLSEQQLVDCDHVC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  Q+ G+ SEKDY Y   +G    C +DKSKV     
Sbjct: 195 DPEERGSCDSGCNGGLMNNAFEYILQSGGVVSEKDYAYTGRDGS---CKFDKSKVVASVS 251

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVG 179
              +     + +   L K GPL+V +N+  +  Y +G         C+   L H VLL+G
Sbjct: 252 NFSVVSLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSC---PYICAKARLDHGVLLLG 308

Query: 180 YG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           +G       +    PYW+++NSWG    +EG++KI RG N CG++ +
Sbjct: 309 FGQGGYAPIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNVCGVDSM 355



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 7/61 (11%)

Query: 965  CSPYDLGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 1017
            C+   L H VLL+G+G       +  + PYW+++NSWG    +EG++KI RG N CG++ 
Sbjct: 295  CAKARLDHGVLLLGFGQGGYAPIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNVCGVDS 354

Query: 1018 I 1018
            +
Sbjct: 355  M 355


>gi|11066228|gb|AAG28508.1|AF197480_1 cathepsin F [Mus musculus]
          Length = 462

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 145/310 (46%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 275

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+E DY
Sbjct: 276 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGLPSNAYAAIKNLGGLETEDDY 335

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
            Y+   G    C +     K++             +   L + GP+SV +N+  + FY  
Sbjct: 336 GYQ---GHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRH 392

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
                    CSP+ + HAVLLVGYG + +IPYW  +NSWG    +EG++ + RG+ ACG+
Sbjct: 393 GIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGV 452

Query: 583 EQIAGYATID 592
             +A  A ++
Sbjct: 453 NTMASSAVVN 462



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 275

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEK 825
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y    +  GLE+E 
Sbjct: 276 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGL--PSNAYAAIKNLGGLETED 333

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DY Y+   G    C +     K++             +   L + GP+SV +N+  +  Y
Sbjct: 334 DYGYQ---GHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFY 390

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                      CSP+ + HAVLLVGYG + NIPYW ++NSWG    +EG++ + RG+ AC
Sbjct: 391 RHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGAC 450

Query: 946 GIEQIAGYATID 957
           G+  +A  A ++
Sbjct: 451 GVNTMASSAVVN 462



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 114/219 (52%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWRKK       +Q  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 249 APPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVD 308

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y    +  GLE+E DY Y+   G    C +     K++         
Sbjct: 309 KACLGGL--PSNAYAAIKNLGGLETEDDYGYQ---GHVQTCNFSAQMAKVYINDSVELSR 363

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIP
Sbjct: 364 NENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIP 423

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 424 YWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVVN 462



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + +IPYW ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 402  CSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVV 461

Query: 1025 D 1025
            +
Sbjct: 462  N 462


>gi|301775254|ref|XP_002923050.1| PREDICTED: cathepsin H-like [Ailuropoda melanoleuca]
          Length = 307

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 158/314 (50%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 709
           FK+++V+  ++Y++ EE + R   F     K + H       + G ++FSD S  EI  K
Sbjct: 7   FKSWMVQHQKKYSS-EEYQHRLRTFVGNWRKINAHNAGNHTFKMGLNQFSDMSFAEI--K 63

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P   DWRKK     P  +Q  CGSCW 
Sbjct: 64  RKYLWSEP--QNCSATKGNY------LRGTGPYPPFVDWRKKGKFVSPVKNQGGCGSCWT 115

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AIKTGKL+  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 116 FSTTGALESAIAIKTGKLLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYIRYNRGIMGED 175

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVL--LNSDL 881
            YPYK  +G+   C +  SK   F  KD   +  N  + M + +  + P+S    +  D 
Sbjct: 176 SYPYKGQDGD---CKFQPSKAIAFV-KDVANITINDEQAMVEAVALFNPVSFAFEVTGDF 231

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG+Q+ +PYW+V+NSWGP     G+F IE
Sbjct: 232 MMYRKGV---YSSTSCHKTPDKVNHAVLAVGYGEQNGVPYWIVKNSWGPQWGMHGYFLIE 288

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 289 RGKNMCGLAACASY 302



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 157/314 (50%), Gaps = 35/314 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 343
           FK+++V+  ++Y++ EE + R   F     K + H       + G ++FSD S  EI  K
Sbjct: 7   FKSWMVQHQKKYSS-EEYQHRLRTFVGNWRKINAHNAGNHTFKMGLNQFSDMSFAEI--K 63

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P   DWRKK     P  +Q  CGSCW 
Sbjct: 64  RKYLWSEP--QNCSATKGNY------LRGTGPYPPFVDWRKKGKFVSPVKNQGGCGSCWT 115

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AIKTGKL+  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 116 FSTTGALESAIAIKTGKLLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYIRYNRGIMGED 175

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVG--LNSHL 516
            YPY+  +G+   C +  SK   F  KD   +  N  + M + +  + P+S    +    
Sbjct: 176 SYPYKGQDGD---CKFQPSKAIAFV-KDVANITINDEQAMVEAVALFNPVSFAFEVTGDF 231

Query: 517 IHFYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
           + +  G     +  +C  +P  + HAVL VGYG+Q+ +PYW+ +NSWGP     G+F IE
Sbjct: 232 MMYRKGV---YSSTSCHKTPDKVNHAVLAVGYGEQNGVPYWIVKNSWGPQWGMHGYFLIE 288

Query: 575 RGNNACGIEQIAGY 588
           RG N CG+   A Y
Sbjct: 289 RGKNMCGLAACASY 302



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 119/224 (53%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P   DWRKK     P  +Q  CGSCW FS  G LE   AIKTGKL+  ++ QLV+CA
Sbjct: 86  GPYPPFVDWRKKGKFVSPVKNQGGCGSCWTFSTTGALESAIAIKTGKLLSLAEQQLVDCA 145

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPYK  +G+   C +  SK   F  KD  
Sbjct: 146 QDFNNHGCQGGLPSQAFEYIRYNRGIMGEDSYPYKGQDGD---CKFQPSKAIAFV-KDVA 201

Query: 124 -LHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
            +  N  + M + +  + P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 202 NITINDEQAMVEAVALFNPVSFAFEVTGDFMMYRKGV---YSSTSCHKTPDKVNHAVLAV 258

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+Q+ +PYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 259 GYGEQNGVPYWIVKNSWGPQWGMHGYFLIERGKNMCGLAACASY 302



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+Q+ +PYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 247  TPDKVNHAVLAVGYGEQNGVPYWIVKNSWGPQWGMHGYFLIERGKNMCGLAACASY 302


>gi|60396844|gb|AAX19661.1| cysteine proteinase [Populus tomentosa]
          Length = 374

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 160/330 (48%), Gaps = 49/330 (14%)

Query: 661 FIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGF 712
           F  K  + Y + EE   RF  FK +  +  +H++      +G ++FSD +  E      F
Sbjct: 62  FKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAE------F 115

Query: 713 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 772
           +       ++   ++  +  ++       +P+ +DWR+K   GP  +Q +CGSCW+FS  
Sbjct: 116 RKQVLGLRKLRLPKDANKAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSFSTT 172

Query: 773 GMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLE 822
           G LEG + + TG+LV  S+ QLV+C  +C         SGC+G     + EYT +A GL 
Sbjct: 173 GALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 232

Query: 823 SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 882
            E+DYPY     ++  C +DK KV        +     + +   L K GPL+V  N+  +
Sbjct: 233 REEDYPYTGM--DRGACKFDKDKVAAGVANFSVVSLDEDQIAANLVKNGPLAVATNAVFM 290

Query: 883 HDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGP 931
             Y G           PY     L H VLLVGYG       +    PYW+++NSWG    
Sbjct: 291 QTYIGG-------VSCPYICSRRLDHGVLLVGYGSAGYAPVRMKEKPYWIIKNSWGESWG 343

Query: 932 DEGFFKIERGNNACGIEQIAGYATIDVVKN 961
           + GF+KI RG N CG++ +   +T+  V+ 
Sbjct: 344 ENGFYKICRGRNICGVDSMV--STVAAVQT 371



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 155/319 (48%), Gaps = 46/319 (14%)

Query: 295 FIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGF 346
           F  K  + Y + EE   RF  FK +  +  +H++      +G ++FSD +  E      F
Sbjct: 62  FKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAE------F 115

Query: 347 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 406
           +       ++   ++  +  ++       +P+ +DWR+K   GP  +Q +CGSCW+FS  
Sbjct: 116 RKQVLGLRKLRLPKDANKAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSFSTT 172

Query: 407 GMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA-GLE 457
           G LEG + + TG+LV  S+ QLV+C  +C      S   GC+G  +    EYT +A GL 
Sbjct: 173 GALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 232

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI 517
            E+DYPY     ++  C +DK KV        +     + +   L K GPL+V  N+  +
Sbjct: 233 REEDYPYT--GMDRGACKFDKDKVAAGVANFSVVSLDEDQIAANLVKNGPLAVATNAVFM 290

Query: 518 HFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGPIGP 566
             Y G           PY     L H VLLVGYG       +  + PYW+ +NSWG    
Sbjct: 291 QTYIGG-------VSCPYICSRRLDHGVLLVGYGSAGYAPVRMKEKPYWIIKNSWGESWG 343

Query: 567 DEGFFKIERGNNACGIEQI 585
           + GF+KI RG N CG++ +
Sbjct: 344 ENGFYKICRGRNICGVDSM 362



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 119/230 (51%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K   GP  +Q  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 142 LPEDFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHEC 201

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY     ++  C +DK KV     
Sbjct: 202 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGM--DRGACKFDKDKVAAGVA 259

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V  N+  +  Y G           PY     L H VL
Sbjct: 260 NFSVVSLDEDQIAANLVKNGPLAVATNAVFMQTYIGG-------VSCPYICSRRLDHGVL 312

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 313 LVGYGSAGYAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSM 362



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 307  LDHGVLLVGYGSAGYAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSM 362


>gi|148701126|gb|EDL33073.1| cathepsin F, isoform CRA_a [Mus musculus]
          Length = 417

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 145/310 (46%), Gaps = 21/310 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 342
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 120 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 177

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 178 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 230

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G           +  GLE+E DY
Sbjct: 231 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGLPSNAYAAIKNLGGLETEDDY 290

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
            Y+   G    C +     K++             +   L + GP+SV +N+  + FY  
Sbjct: 291 GYQ---GHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRH 347

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
                    CSP+ + HAVLLVGYG + +IPYW  +NSWG    +EG++ + RG+ ACG+
Sbjct: 348 GIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGV 407

Query: 583 EQIAGYATID 592
             +A  A ++
Sbjct: 408 NTMASSAVVN 417



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 708
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 120 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 177

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 178 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 230

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEK 825
           FS+ G +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y    +  GLE+E 
Sbjct: 231 FSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGL--PSNAYAAIKNLGGLETED 288

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DY Y+   G    C +     K++             +   L + GP+SV +N+  +  Y
Sbjct: 289 DYGYQ---GHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFY 345

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                      CSP+ + HAVLLVGYG + NIPYW ++NSWG    +EG++ + RG+ AC
Sbjct: 346 RHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGAC 405

Query: 946 GIEQIAGYATID 957
           G+  +A  A ++
Sbjct: 406 GVNTMASSAVVN 417



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 114/219 (52%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWRKK       +Q  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 204 APPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVD 263

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y    +  GLE+E DY Y+   G    C +     K++         
Sbjct: 264 KACLGGL--PSNAYAAIKNLGGLETEDDYGYQ---GHVQTCNFSAQMAKVYINDSVELSR 318

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
               +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIP
Sbjct: 319 NENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIP 378

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           YW ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 379 YWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVVN 417



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG + +IPYW ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 357  CSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVV 416

Query: 1025 D 1025
            +
Sbjct: 417  N 417


>gi|13124026|sp|Q9WGE0.1|CATV_NPVHC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|4884631|gb|AAD31760.1|AF120926_1 cysteine proteinase [Hyphantria cunea nucleopolyhedrovirus]
          Length = 324

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 165/329 (50%), Gaps = 30/329 (9%)

Query: 632 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK-------- 683
           +++V  +    +  S  +D       F+ F+ K  + Y+++ E   RF+ F+        
Sbjct: 2   NKIVLCLLVFCVAHSAAYDLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIII 61

Query: 684 QDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTY---ERIVADREKVEKMLMEVEKD 739
           ++ +    +Y  ++FSD S +E + K TG     +T    E +V +R             
Sbjct: 62  KNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPP---------DK 112

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
           GP+   +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ QL++C  
Sbjct: 113 GPLE--FDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY 170

Query: 800 QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
             +GC+G     + E   Q  G+++E DYPY+ ++G                 +    F 
Sbjct: 171 VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVF- 229

Query: 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
             E +K +L   GP+ V +++  I +Y    +R     CS Y   HAVLLVGYG ++N+P
Sbjct: 230 -EEKLKDLLRIVGPIPVAIDASDIVNYRRGIMR----YCSNYGFNHAVLLVGYGVENNVP 284

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           YW+++N+WG    ++G+F++++  NACGI
Sbjct: 285 YWILKNTWGEDWGEQGYFRVQQNINACGI 313



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 166/331 (50%), Gaps = 33/331 (9%)

Query: 266 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK-------- 317
           +++V  +    +  S  +D       F+ F+ K  + Y+++ E   RF+ F+        
Sbjct: 2   NKIVLCLLVFCVAHSAAYDLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIII 61

Query: 318 QDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTY---ERIVADREKVEKMLMEVEKD 373
           ++ +    +Y  ++FSD S +E + K TG     +T    E +V +R             
Sbjct: 62  KNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPP---------DK 112

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
           GP+   +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ QL++C  
Sbjct: 113 GPLE--FDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY 170

Query: 434 QCSGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
             +GC G   L    E   Q  G+++E DYPY   +G    C  D +K  +   K + Y 
Sbjct: 171 VDAGCNG-GLLHTAYEAVMQMGGVQAENDYPYEGSDG---NCRVDVAKFVVKVKKCYRYI 226

Query: 493 NG-SETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
               E +K +L   GP+ V +++  I  Y    +R     CS Y   HAVLLVGYG +++
Sbjct: 227 AVFEEKLKDLLRIVGPIPVAIDASDIVNYRRGIMR----YCSNYGFNHAVLLVGYGVENN 282

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
           +PYW+ +N+WG    ++G+F++++  NACGI
Sbjct: 283 VPYWILKNTWGEDWGEQGYFRVQQNINACGI 313



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ QL++C    +
Sbjct: 114 PLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDYVDA 173

Query: 72  GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 130
           GC+G     + E   Q  G+++E DYPY+ ++G                 +    F   E
Sbjct: 174 GCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVF--EE 231

Query: 131 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 190
            +K +L   GP+ V +++  I +Y    +R     CS Y   HAVLLVGYG ++N+PYW+
Sbjct: 232 KLKDLLRIVGPIPVAIDASDIVNYRRGIMR----YCSNYGFNHAVLLVGYGVENNVPYWI 287

Query: 191 VRNSWGPIGPDEGFFKIERGNNACGI 216
           ++N+WG    ++G+F++++  NACGI
Sbjct: 288 LKNTWGEDWGEQGYFRVQQNINACGI 313



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 40/51 (78%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS Y   HAVLLVGYG ++++PYW+++N+WG    ++G+F++++  NACGI
Sbjct: 263  CSNYGFNHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQNINACGI 313


>gi|388491952|gb|AFK34042.1| unknown [Lotus japonicus]
          Length = 352

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 156/317 (49%), Gaps = 34/317 (10%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  K G++Y + EEI+ RF  F ++       +KK   Y  G + F+D S +E   
Sbjct: 52  SFARFASKYGKRYDSVEEIQHRFRIFSENLELIKSTNKKRLSYKLGLNHFADLSWDEF-- 109

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +T    + +     +    K+   ++  EKD        WRK+++     DQA CGSCW 
Sbjct: 110 RTQKLGAAQNCSATLIGNHKLTDAVLSAEKD--------WRKESIVSEVKDQAHCGSCWT 161

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  YA   GK +  S+ QLV+CA   +  GC+G     + EY  +  G+  EK
Sbjct: 162 FSTTGALEAAYAQAHGKNISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKYNGGIALEK 221

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           +YPY  A  E  K   +   V++    + +     + +K  +    P+SV          
Sbjct: 222 EYPY-TAKDEASKFTAENVAVRVLDSVN-ITLGAEDELKHAVAFARPVSVAFQV-----V 274

Query: 886 NGTPIRK----NDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +G  + K      +TC  +P D+ HAVL VGYG ++N+PYW+++NSWG    D G+FK+E
Sbjct: 275 DGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVENNVPYWIIKNSWGSTWGDHGYFKME 334

Query: 940 RGNNACGIEQIAGYATI 956
            G N CG+   A Y  +
Sbjct: 335 LGKNMCGVATCASYPIV 351



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 153/317 (48%), Gaps = 33/317 (10%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  K G++Y + EEI+ RF  F ++       +KK   Y  G + F+D S +E   
Sbjct: 52  SFARFASKYGKRYDSVEEIQHRFRIFSENLELIKSTNKKRLSYKLGLNHFADLSWDEF-- 109

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +T    + +     +    K+   ++  EKD        WRK+++     DQA CGSCW 
Sbjct: 110 RTQKLGAAQNCSATLIGNHKLTDAVLSAEKD--------WRKESIVSEVKDQAHCGSCWT 161

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  YA   GK +  S+ QLV+CA   +  G   GL  Q  EY  +  G+  EK
Sbjct: 162 FSTTGALEAAYAQAHGKNISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKYNGGIALEK 221

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY 520
           +YPY     E  K   +   V++    + +     + +K  +    P+SV          
Sbjct: 222 EYPY-TAKDEASKFTAENVAVRVLDSVN-ITLGAEDELKHAVAFARPVSVAF-----QVV 274

Query: 521 NGTPIRK----NDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
           +G  + K      +TC  +P D+ HAVL VGYG ++++PYW+ +NSWG    D G+FK+E
Sbjct: 275 DGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVENNVPYWIIKNSWGSTWGDHGYFKME 334

Query: 575 RGNNACGIEQIAGYATI 591
            G N CG+   A Y  +
Sbjct: 335 LGKNMCGVATCASYPIV 351



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 115/219 (52%), Gaps = 16/219 (7%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GC 73
           DWRK+++     DQA CGSCW FS  G LE  YA   GK +  S+ QLV+CA   +  GC
Sbjct: 140 DWRKESIVSEVKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQQLVDCAGAFNNFGC 199

Query: 74  DGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 132
           +G     + EY  +  G+  EK+YPY  A  E  K   +   V++    + +     + +
Sbjct: 200 NGGLPSQAFEYIKYNGGIALEKEYPY-TAKDEASKFTAENVAVRVLDSVN-ITLGAEDEL 257

Query: 133 KKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETC--SPYDLGHAVLLVGYGKQDNI 186
           K  +    P+SV          +G  + K      +TC  +P D+ HAVL VGYG ++N+
Sbjct: 258 KHAVAFARPVSVAFQV-----VDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVENNV 312

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           PYW+++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 313 PYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCASYPIV 351



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V   +TC  +P D+ HAVL VGYG ++++PYW+++NSWG    D G+FK+E G N CG+ 
Sbjct: 284  VYTSDTCGNTPMDVNHAVLAVGYGVENNVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVA 343

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 344  TCASYPIV 351


>gi|363737841|ref|XP_001232765.2| PREDICTED: pro-cathepsin H [Gallus gallus]
          Length = 327

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 149/305 (48%), Gaps = 30/305 (9%)

Query: 664 KRGRQYANDEEIKERFEYFKQDGHKKHERYGTS-------EFSDRSPEEILCKTGFKWSE 716
           + GR+Y   E  +    +     H +    G S       +FSD +  E   K  + WSE
Sbjct: 33  QHGRRYEAGEYERRLRVFVGNKRHIEGHNAGNSSFQMALNQFSDMTFAEF--KKLYLWSE 90

Query: 717 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGML 775
              +   A R         +  DGP P+A DWRKK N   P  +Q  CGSCW FS  G L
Sbjct: 91  P--QNCSATRGNF------LRSDGPCPEAVDWRKKGNFVTPVKNQGPCGSCWTFSTTGCL 142

Query: 776 EGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNA 832
           E   AI TGKL+  ++ QLV+CA+  +  GC G     + EY  +  GL  E  YPY+  
Sbjct: 143 ESAIAIATGKLLSLAEQQLVDCAQAFNNHGCSGGLPSQAFEYILYNKGLMGEDAYPYRAQ 202

Query: 833 NGEKFKCAYDKSKVKLFTGKDFLHFNGSET--MKKILYKYGPLSVL--LNSDLIHDYNGT 888
           NG    C +   K   F  KD ++    +   M + + K+ P+S    + SD +H   G 
Sbjct: 203 NG---TCKFQPDKAIAFV-KDVINITQYDEAGMVEAVGKHNPVSFAFEVTSDFMHYRKGV 258

Query: 889 PIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 948
                 E  +P  + HAVL VGYG++D  PYW+V+NSWGP+   +G+F IERG N CG+ 
Sbjct: 259 YSNPRCEH-TPDKVNHAVLAVGYGEEDGRPYWIVKNSWGPLWGMDGYFLIERGKNMCGLA 317

Query: 949 QIAGY 953
             A Y
Sbjct: 318 ACASY 322



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 123/226 (54%), Gaps = 13/226 (5%)

Query: 5   VEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           +  DGP P+A DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL+  ++ QL
Sbjct: 102 LRSDGPCPEAVDWRKKGNFVTPVKNQGPCGSCWTFSTTGCLESAIAIATGKLLSLAEQQL 161

Query: 64  VECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           V+CA+  +  GC G     + EY  +  GL  E  YPY+  NG    C +   K   F  
Sbjct: 162 VDCAQAFNNHGCSGGLPSQAFEYILYNKGLMGEDAYPYRAQNG---TCKFQPDKAIAFV- 217

Query: 121 KDFLHFNGSET--MKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 176
           KD ++    +   M + + K+ P+S    + SD +H   G       E  +P  + HAVL
Sbjct: 218 KDVINITQYDEAGMVEAVGKHNPVSFAFEVTSDFMHYRKGVYSNPRCEH-TPDKVNHAVL 276

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
            VGYG++D  PYW+V+NSWGP+   +G+F IERG N CG+   A Y
Sbjct: 277 AVGYGEEDGRPYWIVKNSWGPLWGMDGYFLIERGKNMCGLAACASY 322



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 147/305 (48%), Gaps = 29/305 (9%)

Query: 298 KRGRQYANDEEIKERFEYFKQDGHKKHERYGTS-------EFSDRSPEEILCKTGFKWSE 350
           + GR+Y   E  +    +     H +    G S       +FSD +  E   K  + WSE
Sbjct: 33  QHGRRYEAGEYERRLRVFVGNKRHIEGHNAGNSSFQMALNQFSDMTFAEF--KKLYLWSE 90

Query: 351 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGML 409
              +   A R         +  DGP P+A DWRKK N   P  +Q  CGSCW FS  G L
Sbjct: 91  P--QNCSATRGNF------LRSDGPCPEAVDWRKKGNFVTPVKNQGPCGSCWTFSTTGCL 142

Query: 410 EGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNG 467
           E   AI TGKL+  ++ QLV+CA+  +  G   GL  Q  EY  +  GL  E  YPYR  
Sbjct: 143 ESAIAIATGKLLSLAEQQLVDCAQAFNNHGCSGGLPSQAFEYILYNKGLMGEDAYPYRAQ 202

Query: 468 NGEKFKCAYDKSKVKLFTGKDFLYFNGSET--MKKILYKYGPLSVG--LNSHLIHFYNGT 523
           NG    C +   K   F  KD +     +   M + + K+ P+S    + S  +H+  G 
Sbjct: 203 NG---TCKFQPDKAIAFV-KDVINITQYDEAGMVEAVGKHNPVSFAFEVTSDFMHYRKGV 258

Query: 524 PIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIE 583
                 E  +P  + HAVL VGYG++D  PYW+ +NSWGP+   +G+F IERG N CG+ 
Sbjct: 259 YSNPRCEH-TPDKVNHAVLAVGYGEEDGRPYWIVKNSWGPLWGMDGYFLIERGKNMCGLA 317

Query: 584 QIAGY 588
             A Y
Sbjct: 318 ACASY 322



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 40/56 (71%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG++D  PYW+V+NSWGP+   +G+F IERG N CG+   A Y
Sbjct: 267  TPDKVNHAVLAVGYGEEDGRPYWIVKNSWGPLWGMDGYFLIERGKNMCGLAACASY 322


>gi|297816790|ref|XP_002876278.1| hypothetical protein ARALYDRAFT_485911 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322116|gb|EFH52537.1| hypothetical protein ARALYDRAFT_485911 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 368

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 169/365 (46%), Gaps = 55/365 (15%)

Query: 633 QVVARVDTLAIEGSLTFDNE----NILET-----FKAFIVKRGRQYANDEEIKERFEYFK 683
            VVA V+ L I   +T D      N+L T     F+ F+   G+ Y+  EE   R   F 
Sbjct: 18  HVVASVEDLTIR-QVTADERRVRPNLLGTHTESKFRVFMSDYGKNYSTREEYIHRLGIFA 76

Query: 684 QDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADR-EKVEKMLM 734
           ++  K  E         +G ++FSD + EE      FK        +   R   V     
Sbjct: 77  KNVLKAAEHQMMDPTAVHGVTQFSDLTEEE------FKRMYTGVADVGGSRGHAVGAEAP 130

Query: 735 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 794
            VE DG +P+ +DWR+K       +Q ACGSCWAFS  G  EG + + TGKL+  S+ QL
Sbjct: 131 MVEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQL 189

Query: 795 VEC---------AKQC-SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDK 843
           V+C          K C +GC G     + EY  +A GLE E+ YPY    G++  C +D 
Sbjct: 190 VDCDQAVCDPKDKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPY---TGKRGHCKFDP 246

Query: 844 SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPY 900
            KV +            + +   L + GPL+V LN+  +  Y G    P+      CS  
Sbjct: 247 EKVAVRVVNFTTIPLDEDQIAANLVRQGPLAVGLNAVFMQTYIGGVSCPL-----ICSKR 301

Query: 901 DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
            + H VLLVGYG +        N PYW+++NSWG    + G++K+ RG++ CGI  +   
Sbjct: 302 KVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSMVSA 361

Query: 954 ATIDV 958
               V
Sbjct: 362 VATQV 366



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 170/366 (46%), Gaps = 56/366 (15%)

Query: 267 QVVARVDTLAIEGSLTFDNE----NILET-----FKAFIVKRGRQYANDEEIKERFEYFK 317
            VVA V+ L I   +T D      N+L T     F+ F+   G+ Y+  EE   R   F 
Sbjct: 18  HVVASVEDLTIR-QVTADERRVRPNLLGTHTESKFRVFMSDYGKNYSTREEYIHRLGIFA 76

Query: 318 QDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADR-EKVEKMLM 368
           ++  K  E         +G ++FSD + EE      FK        +   R   V     
Sbjct: 77  KNVLKAAEHQMMDPTAVHGVTQFSDLTEEE------FKRMYTGVADVGGSRGHAVGAEAP 130

Query: 369 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 428
            VE DG +P+ +DWR+K       +Q ACGSCWAFS  G  EG + + TGKL+  S+ QL
Sbjct: 131 MVEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQL 189

Query: 429 VEC---------AKQC-SGCGGCDGLEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYD 477
           V+C          K C +GCGG   +    EY  +A GLE E+ YPY    G++  C +D
Sbjct: 190 VDCDQAVCDPKDKKACDNGCGG-GLMTNAYEYLMEAGGLEEERSYPY---TGKRGHCKFD 245

Query: 478 KSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG---TPIRKNDETCSP 534
             KV +            + +   L + GPL+VGLN+  +  Y G    P+      CS 
Sbjct: 246 PEKVAVRVVNFTTIPLDEDQIAANLVRQGPLAVGLNAVFMQTYIGGVSCPL-----ICSK 300

Query: 535 YDLGHAVLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAG 587
             + H VLLVGYG +        + PYW+ +NSWG    + G++K+ RG++ CGI  +  
Sbjct: 301 RKVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSMVS 360

Query: 588 YATIDV 593
                V
Sbjct: 361 AVATQV 366



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 123/244 (50%), Gaps = 30/244 (12%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           VE DG +P+ +DWR+K       +Q  CGSCWAFS  G  EG + + TGKL+  S+ QLV
Sbjct: 132 VEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQLV 190

Query: 65  EC---------AKQC-SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKS 113
           +C          K C +GC G     + EY  +A GLE E+ YPY    G++  C +D  
Sbjct: 191 DCDQAVCDPKDKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPY---TGKRGHCKFDPE 247

Query: 114 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYD 170
           KV +            + +   L + GPL+V LN+  +  Y G    P+      CS   
Sbjct: 248 KVAVRVVNFTTIPLDEDQIAANLVRQGPLAVGLNAVFMQTYIGGVSCPL-----ICSKRK 302

Query: 171 LGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 223
           + H VLLVGYG +        N PYW+++NSWG    + G++K+ RG++ CGI  +    
Sbjct: 303 VNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSMVSAV 362

Query: 224 TIDV 227
              V
Sbjct: 363 ATQV 366


>gi|224082940|ref|XP_002306900.1| predicted protein [Populus trichocarpa]
 gi|118481986|gb|ABK92924.1| unknown [Populus trichocarpa]
 gi|222856349|gb|EEE93896.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 152/323 (47%), Gaps = 38/323 (11%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RYGTSEFSDRSPE 704
           N    F  F  K G+ YA  EE   RF  FK +    KKH+       +G ++FSD +P+
Sbjct: 46  NAEHHFTTFKSKFGKNYATQEEHDYRFSVFKANLLRAKKHQIMDPTAAHGVTKFSDLTPK 105

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E        +  +        R   +     +   G +P  +DWR         DQ +CG
Sbjct: 106 E--------FRRQLLGLKRRLRLPTDANKAPILPTGDLPTDFDWRDHGAVTSVKDQGSCG 157

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCW+FS  G LEG + + TG+LV  S+ QLV+C  +C         SGC G     + EY
Sbjct: 158 SCWSFSATGALEGAHYLATGELVSLSEQQLVDCDHECDPEEYGACDSGCSGGLMNNAFEY 217

Query: 816 THQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
             +A GLE EKDYPY     ++  C ++KSKV        +     + +   L K+GPLS
Sbjct: 218 ALKAGGLEREKDYPY--TGNDRGACKFEKSKVAASVSNFSVVSLDEDQIAANLVKHGPLS 275

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWG 927
           V +N+  +  Y G         CS +   H VLLVGYG       +    P+W+++NSWG
Sbjct: 276 VAINAVFMQTYIGG--VSCPYICSKHQ-DHGVLLVGYGAAGYAPIRFKEKPFWIIKNSWG 332

Query: 928 PIGPDEGFFKIERGNNACGIEQI 950
               + G++KI R  N CG++ +
Sbjct: 333 ENWGENGYYKICRARNICGVDSM 355



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 158/335 (47%), Gaps = 38/335 (11%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RYGTSEFSDRSPE 338
           N    F  F  K G+ YA  EE   RF  FK +    KKH+       +G ++FSD +P+
Sbjct: 46  NAEHHFTTFKSKFGKNYATQEEHDYRFSVFKANLLRAKKHQIMDPTAAHGVTKFSDLTPK 105

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E        +  +        R   +     +   G +P  +DWR         DQ +CG
Sbjct: 106 E--------FRRQLLGLKRRLRLPTDANKAPILPTGDLPTDFDWRDHGAVTSVKDQGSCG 157

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-----GC-GGCDG--LEQPIEY 450
           SCW+FS  G LEG + + TG+LV  S+ QLV+C  +C       C  GC G  +    EY
Sbjct: 158 SCWSFSATGALEGAHYLATGELVSLSEQQLVDCDHECDPEEYGACDSGCSGGLMNNAFEY 217

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
             +A GLE EKDYPY  GN ++  C ++KSKV        +     + +   L K+GPLS
Sbjct: 218 ALKAGGLEREKDYPY-TGN-DRGACKFEKSKVAASVSNFSVVSLDEDQIAANLVKHGPLS 275

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLARNSWG 562
           V +N+  +  Y G         CS +   H VLLVGYG       +  + P+W+ +NSWG
Sbjct: 276 VAINAVFMQTYIGG--VSCPYICSKHQ-DHGVLLVGYGAAGYAPIRFKEKPFWIIKNSWG 332

Query: 563 PIGPDEGFFKIERGNNACGIEQ-IAGYATIDVVIQ 596
               + G++KI R  N CG++  ++  A I    Q
Sbjct: 333 ENWGENGYYKICRARNICGVDSMVSTVAAIHATAQ 367



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 120/240 (50%), Gaps = 23/240 (9%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P  +DWR         DQ  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C  
Sbjct: 133 GDLPTDFDWRDHGAVTSVKDQGSCGSCWSFSATGALEGAHYLATGELVSLSEQQLVDCDH 192

Query: 69  QC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
           +C         SGC G     + EY  +A GLE EKDYPY     ++  C ++KSKV   
Sbjct: 193 ECDPEEYGACDSGCSGGLMNNAFEYALKAGGLEREKDYPY--TGNDRGACKFEKSKVAAS 250

Query: 119 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 178
                +     + +   L K+GPLSV +N+  +  Y G         CS +   H VLLV
Sbjct: 251 VSNFSVVSLDEDQIAANLVKHGPLSVAINAVFMQTYIGG--VSCPYICSKHQ-DHGVLLV 307

Query: 179 GYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVVIQ 230
           GYG       +    P+W+++NSWG    + G++KI R  N CG++  ++  A I    Q
Sbjct: 308 GYGAAGYAPIRFKEKPFWIIKNSWGENWGENGYYKICRARNICGVDSMVSTVAAIHATAQ 367



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 7/54 (12%)

Query: 972  HAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            H VLLVGYG       +  + P+W+++NSWG    + G++KI R  N CG++ +
Sbjct: 302  HGVLLVGYGAAGYAPIRFKEKPFWIIKNSWGENWGENGYYKICRARNICGVDSM 355


>gi|343472324|emb|CCD15484.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 153/318 (48%), Gaps = 24/318 (7%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVTVS-TGKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EGQ+ +   +L   S+  LV C      C+G F + +  +   +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQTLVSCDPTEYACEGGFMDNAFRWIISSNKGK 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNS 879
           + +E+ YPY ++ G          KV      D++     E  + + L K GP+SV++++
Sbjct: 208 VFTEQSYPY-SSGGRNVPACNMSGKVVGANISDYVDLPQDENAIAEWLAKNGPVSVIVDA 266

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
                Y G  +     +C    L HAVLLVGY      PYW+++NSW     ++G+ +IE
Sbjct: 267 TSFQSYTGGVL----TSCLSKILNHAVLLVGYDDTSKPPYWIIKNSWSEKWGEKGYIRIE 322

Query: 940 RGNNACGIEQIAGYATID 957
           +G N C +++ A  A ++
Sbjct: 323 KGTNQCLVQEYASSALVN 340



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 149/318 (46%), Gaps = 23/318 (7%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVTVS-TGKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
           GSCWAFS  G +EGQ+ +   +L   S+  LV C      C G   D   + I  +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQTLVSCDPTEYACEGGFMDNAFRWIISSNKGK 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS 514
           + +E+ YPY +G G          KV      D++     E  + + L K GP+SV +++
Sbjct: 208 VFTEQSYPYSSG-GRNVPACNMSGKVVGANISDYVDLPQDENAIAEWLAKNGPVSVIVDA 266

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
                Y G  +     +C    L HAVLLVGY      PYW+ +NSW     ++G+ +IE
Sbjct: 267 TSFQSYTGGVL----TSCLSKILNHAVLLVGYDDTSKPPYWIIKNSWSEKWGEKGYIRIE 322

Query: 575 RGNNACGIEQIAGYATID 592
           +G N C +++ A  A ++
Sbjct: 323 KGTNQCLVQEYASSALVN 340



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 9/222 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P+A DWRKK    P  DQ  CGSCWAFS  G +EGQ+ +   +L   S+  LV C  
Sbjct: 124 GKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIGNIEGQWKVAGHELTSLSEQTLVSCDP 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
               C+G F + +  +   +++  + +E+ YPY ++ G          KV      D++ 
Sbjct: 184 TEYACEGGFMDNAFRWIISSNKGKVFTEQSYPY-SSGGRNVPACNMSGKVVGANISDYVD 242

Query: 126 FNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
               E  + + L K GP+SV++++     Y G  +     +C    L HAVLLVGY    
Sbjct: 243 LPQDENAIAEWLAKNGPVSVIVDATSFQSYTGGVL----TSCLSKILNHAVLLVGYDDTS 298

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
             PYW+++NSW     ++G+ +IE+G N C +++ A  A ++
Sbjct: 299 KPPYWIIKNSWSEKWGEKGYIRIEKGTNQCLVQEYASSALVN 340


>gi|164605519|dbj|BAF98585.1| CM0216.510.nc [Lotus japonicus]
          Length = 360

 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 149/322 (46%), Gaps = 47/322 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 709
           F  F  + G+ Y ++EE   RF  FK + H+            +G + FSD +P E    
Sbjct: 45  FLEFKRRFGKVYVSEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTRFSDLTPME---- 100

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CG+CW+F
Sbjct: 101 --FRHSVLGLRGVGLPSDADSAPILRTDN---LPKDFDWREHGAVTPVKNQGSCGACWSF 155

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYT-HQA 819
           S  G LEG + + TGKLV  S+ QLV+C  +C         SGC G     + EY  +  
Sbjct: 156 SATGALEGAHFLSTGKLVSLSEQQLVDCDHECDPEEAGSCDSGCKGGLMNSAFEYILNNG 215

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           G+  E+DYPY    G    C +D++K+        +     + +   L K GPL+V +N+
Sbjct: 216 GVMREEDYPYSGTAGG--TCKFDQTKIAASVANFSVVSRDEDQIAANLVKNGPLAVAINA 273

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQD-------NIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG +          PYW+++NSWG 
Sbjct: 274 VYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGE 326

Query: 929 IGPDEGFFKIERGNNACGIEQI 950
              + G++KI RG N CG++ +
Sbjct: 327 NWGENGYYKICRGRNVCGVDSM 348



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 147/322 (45%), Gaps = 46/322 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 343
           F  F  + G+ Y ++EE   RF  FK + H+            +G + FSD +P E    
Sbjct: 45  FLEFKRRFGKVYVSEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTRFSDLTPME---- 100

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CG+CW+F
Sbjct: 101 --FRHSVLGLRGVGLPSDADSAPILRTDN---LPKDFDWREHGAVTPVKNQGSCGACWSF 155

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG--CGGCDG------LEQPIEYT-HQA 454
           S  G LEG + + TGKLV  S+ QLV+C  +C     G CD       +    EY  +  
Sbjct: 156 SATGALEGAHFLSTGKLVSLSEQQLVDCDHECDPEEAGSCDSGCKGGLMNSAFEYILNNG 215

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           G+  E+DYPY    G    C +D++K+        +     + +   L K GPL+V +N+
Sbjct: 216 GVMREEDYPYSGTAGG--TCKFDQTKIAASVANFSVVSRDEDQIAANLVKNGPLAVAINA 273

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQD-------DIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG +          PYW+ +NSWG 
Sbjct: 274 VYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGE 326

Query: 564 IGPDEGFFKIERGNNACGIEQI 585
              + G++KI RG N CG++ +
Sbjct: 327 NWGENGYYKICRGRNVCGVDSM 348



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 114/230 (49%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+     P  +Q  CG+CW+FS  G LEG + + TGKLV  S+ QLV+C  +C
Sbjct: 128 LPKDFDWREHGAVTPVKNQGSCGACWSFSATGALEGAHFLSTGKLVSLSEQQLVDCDHEC 187

Query: 71  ---------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC G     + EY  +  G+  E+DYPY    G    C +D++K+     
Sbjct: 188 DPEEAGSCDSGCKGGLMNSAFEYILNNGGVMREEDYPYSGTAGG--TCKFDQTKIAASVA 245

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 246 NFSVVSRDEDQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYVCSKKLNHGVL 298

Query: 177 LVGYGKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 299 LVGYGSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 348



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYGKQD-------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 293  LNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 348


>gi|111073719|dbj|BAF02548.1| triticain gamma [Triticum aestivum]
          Length = 365

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 146/315 (46%), Gaps = 31/315 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           F  F V+ G+ Y +  E++ RF  F +   +           R G + FSD S       
Sbjct: 64  FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLSYRLGINRFSDMS------- 116

Query: 710 TGFKWSERTYERIVADREKVEKMLME--VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
               W E    R+ A +     +     +     +P+  DWR+  +  P  DQ+ CGSCW
Sbjct: 117 ----WEEFQATRLGAAQTCSATLAGNHLMRDAAALPETKDWREDGIVSPVKDQSHCGSCW 172

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESE 824
            FS  G LE  Y   TGK +  S+ QLV+CA   +  GC G     + EY  +  G+++E
Sbjct: 173 TFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCSGGLPSQAFEYIKYNGGIDTE 232

Query: 825 KDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DL 881
           + YPYK  NG    C Y  + + V++    + +  N  + +K  +    P+SV     + 
Sbjct: 233 ESYPYKGVNG---VCHYKAENAVVQVLDSVN-ITLNAEDELKNAVGLVRPVSVAFEVING 288

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
              Y       +    +P D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G
Sbjct: 289 FRQYKSGVYSSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMG 348

Query: 942 NNACGIEQIAGYATI 956
            N C +   A Y  +
Sbjct: 349 KNMCAVATCASYPIV 363



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           F  F V+ G+ Y +  E++ RF  F +   +           R G + FSD S       
Sbjct: 64  FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLSYRLGINRFSDMS------- 116

Query: 344 TGFKWSERTYERIVADREKVEKMLME--VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
               W E    R+ A +     +     +     +P+  DWR+  +  P  DQ+ CGSCW
Sbjct: 117 ----WEEFQATRLGAAQTCSATLAGNHLMRDAAALPETKDWREDGIVSPVKDQSHCGSCW 172

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESE 459
            FS  G LE  Y   TGK +  S+ QLV+CA   +  G   GL  Q  EY  +  G+++E
Sbjct: 173 TFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCSGGLPSQAFEYIKYNGGIDTE 232

Query: 460 KDYPYRNGNGEKFKCAY--DKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS-HL 516
           + YPY+  NG    C Y  + + V++    + +  N  + +K  +    P+SV     + 
Sbjct: 233 ESYPYKGVNG---VCHYKAENAVVQVLDSVN-ITLNAEDELKNAVGLVRPVSVAFEVING 288

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y       +    +P D+ HAVL VGYG ++ +PYWL +NSWG    D G+FK+E G
Sbjct: 289 FRQYKSGVYSSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMG 348

Query: 577 NNACGIEQIAGYATI 591
            N C +   A Y  +
Sbjct: 349 KNMCAVATCASYPIV 363



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 115/221 (52%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  DQ+ CGSCW FS  G LE  Y   TGK +  S+ QLV+CA   
Sbjct: 147 LPETKDWREDGIVSPVKDQSHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGF 206

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLH 125
           +  GC G     + EY  +  G+++E+ YPYK  NG    C Y  + + V++    + + 
Sbjct: 207 NNFGCSGGLPSQAFEYIKYNGGIDTEESYPYKGVNG---VCHYKAENAVVQVLDSVN-IT 262

Query: 126 FNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
            N  + +K  +    P+SV     +    Y       +    +P D+ HAVL VGYG ++
Sbjct: 263 LNAEDELKNAVGLVRPVSVAFEVINGFRQYKSGVYSSDHCGTTPDDVNHAVLAVGYGVEN 322

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +PYWL++NSWG    D G+FK+E G N C +   A Y  +
Sbjct: 323 GVPYWLIKNSWGADWGDNGYFKMEMGKNMCAVATCASYPIV 363



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 39/59 (66%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +P D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N C +   A Y  +
Sbjct: 305  TPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAVATCASYPIV 363


>gi|354466410|ref|XP_003495667.1| PREDICTED: pro-cathepsin H-like [Cricetulus griseus]
          Length = 333

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 155/316 (49%), Gaps = 30/316 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ +  + Y++  E   R + F  +  K H         + G ++FSD +  EI  K
Sbjct: 33  FKSWMTQHQKTYSS-VEYNYRLKTFANNWRKIHAHNQRNHTFKMGLNQFSDMTFAEI--K 89

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP+P + DWRKK N      +Q +CGSCW 
Sbjct: 90  RKYLWSEP--QNCSATKGNY------LRGTGPLPPSMDWRKKGNFVSAVKNQGSCGSCWT 141

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI +GK++  ++ QLV+CA+  +  GC+G     + EY  +  G+  E 
Sbjct: 142 FSTTGALESAVAIASGKMLSLAEQQLVDCAQNFNNHGCEGGLPSQAFEYILYNKGIMGED 201

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVLLN-SDLI 882
            YPY+  +G    C +D  K   F  KD   +  N  + M + +  Y P+S     +D  
Sbjct: 202 TYPYRGKDGH---CKFDPQKAIAFV-KDVANITLNDEKAMVEAVALYNPVSFAFEVTDDF 257

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y            +P  + HAVL VGYG++D IPYW+V+NSWG    D+G+F IERG 
Sbjct: 258 MLYQKGIYSSTSCHKTPDKVNHAVLAVGYGEKDGIPYWIVKNSWGTNWGDKGYFLIERGK 317

Query: 943 NACGIEQIAGYATIDV 958
           N CG+   A Y    V
Sbjct: 318 NMCGLAACASYPIPQV 333



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/321 (33%), Positives = 158/321 (49%), Gaps = 39/321 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ +  + Y++  E   R + F  +  K H         + G ++FSD +  EI  K
Sbjct: 33  FKSWMTQHQKTYSS-VEYNYRLKTFANNWRKIHAHNQRNHTFKMGLNQFSDMTFAEI--K 89

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP+P + DWRKK N      +Q +CGSCW 
Sbjct: 90  RKYLWSEP--QNCSATKGNY------LRGTGPLPPSMDWRKKGNFVSAVKNQGSCGSCWT 141

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI +GK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 142 FSTTGALESAVAIASGKMLSLAEQQLVDCAQNFNNHGCEGGLPSQAFEYILYNKGIMGED 201

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGL---NSH 515
            YPYR  +G    C +D  K   F  KD   +  N  + M + +  Y P+S      +  
Sbjct: 202 TYPYRGKDGH---CKFDPQKAIAFV-KDVANITLNDEKAMVEAVALYNPVSFAFEVTDDF 257

Query: 516 LIH---FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +++    Y+ T   K     +P  + HAVL VGYG++D IPYW+ +NSWG    D+G+F 
Sbjct: 258 MLYQKGIYSSTSCHK-----TPDKVNHAVLAVGYGEKDGIPYWIVKNSWGTNWGDKGYFL 312

Query: 573 IERGNNACGIEQIAGYATIDV 593
           IERG N CG+   A Y    V
Sbjct: 313 IERGKNMCGLAACASYPIPQV 333



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 118/226 (52%), Gaps = 11/226 (4%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP+P + DWRKK N      +Q  CGSCW FS  G LE   AI +GK++  ++ QLV+CA
Sbjct: 112 GPLPPSMDWRKKGNFVSAVKNQGSCGSCWTFSTTGALESAVAIASGKMLSLAEQQLVDCA 171

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC+G     + EY  +  G+  E  YPY+  +G    C +D  K   F  KD  
Sbjct: 172 QNFNNHGCEGGLPSQAFEYILYNKGIMGEDTYPYRGKDGH---CKFDPQKAIAFV-KDVA 227

Query: 124 -LHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
            +  N  + M + +  Y P+S     +D    Y            +P  + HAVL VGYG
Sbjct: 228 NITLNDEKAMVEAVALYNPVSFAFEVTDDFMLYQKGIYSSTSCHKTPDKVNHAVLAVGYG 287

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           ++D IPYW+V+NSWG    D+G+F IERG N CG+   A Y    V
Sbjct: 288 EKDGIPYWIVKNSWGTNWGDKGYFLIERGKNMCGLAACASYPIPQV 333



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 41/61 (67%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            +P  + HAVL VGYG++D IPYW+V+NSWG    D+G+F IERG N CG+   A Y    
Sbjct: 273  TPDKVNHAVLAVGYGEKDGIPYWIVKNSWGTNWGDKGYFLIERGKNMCGLAACASYPIPQ 332

Query: 1026 V 1026
            V
Sbjct: 333  V 333


>gi|56682917|gb|AAW21813.1| cysteine protease [Triticum aestivum]
          Length = 377

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 171/355 (48%), Gaps = 48/355 (13%)

Query: 643 IEGSLTFDNENILET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RY 693
           + G+   DN+  L++    F+ + G+ Y + EE   R   FK +  +  +H+       +
Sbjct: 37  VGGADPLDNDLELDSQLLGFVQRFGKTYRDAEEHAHRLSVFKANLRRARRHQMLDPSAEH 96

Query: 694 GTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           G ++FSD +P E      G K + R++ R +A       +L     DG +P+ +DWR   
Sbjct: 97  GVTKFSDLTPAEFRRTFLGLKTTRRSFLREMAGSAHDAPVL---PTDG-LPEDFDWRDHG 152

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SG 803
             GP  +Q +C SCW+FS +G LEG   + TGK+   S+ QLV+C  +C         +G
Sbjct: 153 AVGPVKNQGSCWSCWSFSASGALEGANYLATGKMEVLSEQQLVDCDHECDPAEPDSCDAG 212

Query: 804 CDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 862
           C+G     +  Y  ++ GLE EKDYPY   +G    C ++KSK+        +     E 
Sbjct: 213 CNGGLMTSAFSYLLKSGGLEREKDYPYTGKDG---TCKFEKSKIAASVQNFSVVAVDEEQ 269

Query: 863 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ---- 914
           +   L +YGPL++ +N+  +  Y G           PY     L H VLLVGYG      
Sbjct: 270 IAANLVEYGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVLLVGYGASGFAP 322

Query: 915 ---DNIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQIAGYATIDVVKNDE 963
                 PYW+++NSWG    D+G++KI RG+N    CG++ +    +      +E
Sbjct: 323 SRFKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKCGVDSMVSTVSATHASKEE 377



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 168/342 (49%), Gaps = 47/342 (13%)

Query: 277 IEGSLTFDNENILET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RY 327
           + G+   DN+  L++    F+ + G+ Y + EE   R   FK +  +  +H+       +
Sbjct: 37  VGGADPLDNDLELDSQLLGFVQRFGKTYRDAEEHAHRLSVFKANLRRARRHQMLDPSAEH 96

Query: 328 GTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           G ++FSD +P E      G K + R++ R +A       +L     DG +P+ +DWR   
Sbjct: 97  GVTKFSDLTPAEFRRTFLGLKTTRRSFLREMAGSAHDAPVL---PTDG-LPEDFDWRDHG 152

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGG 440
             GP  +Q +C SCW+FS +G LEG   + TGK+   S+ QLV+C  +C      S   G
Sbjct: 153 AVGPVKNQGSCWSCWSFSASGALEGANYLATGKMEVLSEQQLVDCDHECDPAEPDSCDAG 212

Query: 441 CDGLEQPIEYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET 497
           C+G      +++     GLE EKDYPY   +G    C ++KSK+        +     E 
Sbjct: 213 CNGGLMTSAFSYLLKSGGLEREKDYPYTGKDG---TCKFEKSKIAASVQNFSVVAVDEEQ 269

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ---- 549
           +   L +YGPL++G+N+  +  Y G           PY     L H VLLVGYG      
Sbjct: 270 IAANLVEYGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVLLVGYGASGFAP 322

Query: 550 ---DDIPYWLARNSWGPIGPDEGFFKIERGNNA---CGIEQI 585
               + PYW+ +NSWG    D+G++KI RG+N    CG++ +
Sbjct: 323 SRFKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKCGVDSM 364



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 118/233 (50%), Gaps = 34/233 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR     GP  +Q  C SCW+FS +G LEG   + TGK+   S+ QLV+C  +C
Sbjct: 142 LPEDFDWRDHGAVGPVKNQGSCWSCWSFSASGALEGANYLATGKMEVLSEQQLVDCDHEC 201

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC+G     +  Y  ++ GLE EKDYPY   +G    C ++KSK+     
Sbjct: 202 DPAEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKDG---TCKFEKSKIAASVQ 258

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L +YGPL++ +N+  +  Y G           PY     L H VL
Sbjct: 259 NFSVVAVDEEQIAANLVEYGPLAIGINAAYMQTYIGG-------VSCPYICGRHLDHGVL 311

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 219
           LVGYG            PYW+++NSWG    D+G++KI RG+N    CG++ +
Sbjct: 312 LVGYGASGFAPSRFKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKCGVDSM 364



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 11/91 (12%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLV 990
            +E G  A GI        I  V     C  + L H VLLVGYG          + PYW++
Sbjct: 275  VEYGPLAIGINAAYMQTYIGGVSCPYICGRH-LDHGVLLVGYGASGFAPSRFKEKPYWII 333

Query: 991  RNSWGPIGPDEGFFKIERGNNA---CGIEQI 1018
            +NSWG    D+G++KI RG+N    CG++ +
Sbjct: 334  KNSWGENWGDKGYYKICRGSNVRNKCGVDSM 364


>gi|9634237|ref|NP_037776.1| ORF16 cathepsin [Spodoptera exigua MNPV]
 gi|37077857|sp|Q9J8B9.1|CATV_NPVSE RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|6960476|gb|AAF33546.1|AF169823_16 ORF16 cathepsin [Spodoptera exigua MNPV]
          Length = 337

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 159/315 (50%), Gaps = 34/315 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 709
           F+ FI +  +QY +++E K R+  F+ +    ++K+ R     Y  + F+D    EI+ +
Sbjct: 40  FEKFITQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNEIVIR 99

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 764
            TG           +A  E        +  DGP     P ++DWR  N      DQ  CG
Sbjct: 100 HTG-----------LASGELGLNFCETIVVDGPAQRQRPVSFDWRSMNKITSVKDQGMCG 148

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLES 823
           +CW F+  G LE QYAIK  +L++ S+ QLV+C     GCDG     + E   +  G+E 
Sbjct: 149 ACWRFASLGALESQYAIKYDRLIDLSEQQLVDCDFVDMGCDGGLIHTAYEQIMKMGGVEQ 208

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLI 882
           E DY YK    E+  CA    K        + +     E ++ +L   GP+++ +++  +
Sbjct: 209 EFDYSYK---AERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAVDAVDL 265

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
            DY G  +      C    L HAVLLVGYG ++N+PYW+++NSWG    ++G+ ++ RG 
Sbjct: 266 TDYYGGIV----SFCENNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGV 321

Query: 943 NACG-IEQIAGYATI 956
           N+CG I ++A  A +
Sbjct: 322 NSCGMINELASSAQV 336



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 154/316 (48%), Gaps = 35/316 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 343
           F+ FI +  +QY +++E K R+  F+ +    ++K+ R     Y  + F+D    EI+ +
Sbjct: 40  FEKFITQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNEIVIR 99

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 398
            TG           +A  E        +  DGP     P ++DWR  N      DQ  CG
Sbjct: 100 HTG-----------LASGELGLNFCETIVVDGPAQRQRPVSFDWRSMNKITSVKDQGMCG 148

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           +CW F+  G LE QYAIK  +L++ S+ QLV+C     GC G        +     G+E 
Sbjct: 149 ACWRFASLGALESQYAIKYDRLIDLSEQQLVDCDFVDMGCDGGLIHTAYEQIMKMGGVEQ 208

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGSETMKKILYKYGPLSVGLNS-HL 516
           E DY Y+    E+  CA    K        + Y     E ++ +L   GP+++ +++  L
Sbjct: 209 EFDYSYK---AERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAVDAVDL 265

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
             +Y G         C    L HAVLLVGYG ++++PYW+ +NSWG    ++G+ ++ RG
Sbjct: 266 TDYYGGIV-----SFCENNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRG 320

Query: 577 NNACG-IEQIAGYATI 591
            N+CG I ++A  A +
Sbjct: 321 VNSCGMINELASSAQV 336



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 121/225 (53%), Gaps = 14/225 (6%)

Query: 8   DGPV----PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           DGP     P ++DWR  N      DQ  CG+CW F+  G LE QYAIK  +L++ S+ QL
Sbjct: 119 DGPAQRQRPVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQL 178

Query: 64  VECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           V+C     GCDG     + E   +  G+E E DY YK    E+  CA    K        
Sbjct: 179 VDCDFVDMGCDGGLIHTAYEQIMKMGGVEQEFDYSYK---AERQPCALKPHKFATGVRNC 235

Query: 123 FLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           + +     E ++ +L   GP+++ +++  + DY G  +      C    L HAVLLVGYG
Sbjct: 236 YRYVILNEERLEDLLRYVGPIAIAVDAVDLTDYYGGIV----SFCENNGLNHAVLLVGYG 291

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
            ++N+PYW+++NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 292 VENNVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 336



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYAT 1023
            C    L HAVLLVGYG ++++PYW+++NSWG    ++G+ ++ RG N+CG I ++A  A 
Sbjct: 276  CENNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQ 335

Query: 1024 I 1024
            +
Sbjct: 336  V 336


>gi|289741839|gb|ADD19667.1| cysteine proteinase cathepsin L [Glossina morsitans morsitans]
          Length = 365

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 156/319 (48%), Gaps = 28/319 (8%)

Query: 289 LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERY--GTSEFSDRSPE 338
           ++ F  F+ + G+ YA   E   R   F  + HK         H  Y    + F+D + E
Sbjct: 59  VKDFSDFVQQTGKSYATTAERTLREGVF--NAHKALVEAENQLHAGYELALNAFADLTKE 116

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E L +          E  V +R    ++ +++     +PD++DWR+     P   Q  CG
Sbjct: 117 EFLSQLTGNHKSPQAEAKVKNR----RLALKLNTTAKLPDSFDWREHGAVTPVKFQGKCG 172

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAG 455
           SCWAF++ G LEG    K+GKL+  S+  LV+C ++  G  GCDG  Q   +   + Q G
Sbjct: 173 SCWAFAVTGALEGHSFRKSGKLINLSEQNLVDCGEKAYGLDGCDGGYQEYGFEFISRQNG 232

Query: 456 LESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           +     Y Y +   +K  C+Y K+ K     G   +  N  ETMKK++   GPL+  +N+
Sbjct: 233 VAHGAKYLYVD---KKNTCSYRKTFKAAELKGFSVIPPNDEETMKKVVATLGPLACSINA 289

Query: 515 --HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
              L+ +  G      DE C+  +  H+VL+VGYG +DD  YW+ +NSW  +  +EG+F+
Sbjct: 290 LETLLLYKKGIYA---DEECNKDEPNHSVLVVGYGTEDDQDYWIVKNSWDNVWGEEGYFR 346

Query: 573 IERGNNACGIEQIAGYATI 591
           + RG N C I     Y  +
Sbjct: 347 LPRGKNFCKIASECSYPVL 365



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 157/319 (49%), Gaps = 29/319 (9%)

Query: 655 LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERY--GTSEFSDRSPE 704
           ++ F  F+ + G+ YA   E   R   F  + HK         H  Y    + F+D + E
Sbjct: 59  VKDFSDFVQQTGKSYATTAERTLREGVF--NAHKALVEAENQLHAGYELALNAFADLTKE 116

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E L +          E  V +R    ++ +++     +PD++DWR+     P   Q  CG
Sbjct: 117 EFLSQLTGNHKSPQAEAKVKNR----RLALKLNTTAKLPDSFDWREHGAVTPVKFQGKCG 172

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGC---FFEPSIEY-THQAG 820
           SCWAF++ G LEG    K+GKL+  S+  LV+C ++  G DGC   + E   E+ + Q G
Sbjct: 173 SCWAFAVTGALEGHSFRKSGKLINLSEQNLVDCGEKAYGLDGCDGGYQEYGFEFISRQNG 232

Query: 821 LESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           +     Y Y +   +K  C+Y K+ K     G   +  N  ETMKK++   GPL+  +N+
Sbjct: 233 VAHGAKYLYVD---KKNTCSYRKTFKAAELKGFSVIPPNDEETMKKVVATLGPLACSINA 289

Query: 880 --DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
              L+    G      DE C+  +  H+VL+VGYG +D+  YW+V+NSW  +  +EG+F+
Sbjct: 290 LETLLLYKKGIYA---DEECNKDEPNHSVLVVGYGTEDDQDYWIVKNSWDNVWGEEGYFR 346

Query: 938 IERGNNACGIEQIAGYATI 956
           + RG N C I     Y  +
Sbjct: 347 LPRGKNFCKIASECSYPVL 365



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 13/232 (5%)

Query: 1   MLMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
           + +++     +PD++DWR+     P   Q  CGSCWAF++ G LEG    K+GKL+  S+
Sbjct: 140 LALKLNTTAKLPDSFDWREHGAVTPVKFQGKCGSCWAFAVTGALEGHSFRKSGKLINLSE 199

Query: 61  SQLVECAKQCSGCDGC---FFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKS-KV 115
             LV+C ++  G DGC   + E   E+ + Q G+     Y Y +   +K  C+Y K+ K 
Sbjct: 200 QNLVDCGEKAYGLDGCDGGYQEYGFEFISRQNGVAHGAKYLYVD---KKNTCSYRKTFKA 256

Query: 116 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGH 173
               G   +  N  ETMKK++   GPL+  +N+   L+    G      DE C+  +  H
Sbjct: 257 AELKGFSVIPPNDEETMKKVVATLGPLACSINALETLLLYKKGIYA---DEECNKDEPNH 313

Query: 174 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +VL+VGYG +D+  YW+V+NSW  +  +EG+F++ RG N C I     Y  +
Sbjct: 314 SVLVVGYGTEDDQDYWIVKNSWDNVWGEEGYFRLPRGKNFCKIASECSYPVL 365



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            DE C+  +  H+VL+VGYG +DD  YW+V+NSW  +  +EG+F++ RG N C I     Y
Sbjct: 303  DEECNKDEPNHSVLVVGYGTEDDQDYWIVKNSWDNVWGEEGYFRLPRGKNFCKIASECSY 362

Query: 1022 ATI 1024
              +
Sbjct: 363  PVL 365


>gi|348551380|ref|XP_003461508.1| PREDICTED: pro-cathepsin H-like [Cavia porcellus]
          Length = 335

 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 159/319 (49%), Gaps = 36/319 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 709
           FK+++++  +QY+  E    R + F     K + H K     +   ++FSD S +EI  K
Sbjct: 35  FKSWMMQHQKQYSAKEH-HHRQQTFARNWKKINAHNKGNHTFKMALNQFSDMSFDEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +             GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  RKYLWSEP--QNCSATKSNY------FRGTGPYPTSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI +GK++  ++ QLV+CA+  +  GC+G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAVAIASGKMLSLAEQQLVDCAQDFNNHGCEGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD ++   N  E M + +  Y P+S    +  D 
Sbjct: 204 TYPYQGKDGH---CRFQPQKAIAFV-KDVVNITLNDEEAMVEAVALYNPVSFAFEVTEDF 259

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           I   +G     +  +C  +P  + HAVL VGYG Q+ +PYW+V+NSWG     +G+F IE
Sbjct: 260 ISYQSGI---YSSTSCHKTPDKVNHAVLAVGYGVQNGVPYWIVKNSWGTAWGQDGYFLIE 316

Query: 940 RGNNACGIEQIAGYATIDV 958
           RG N CG+   A +    V
Sbjct: 317 RGKNMCGLAACASFPIPQV 335



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 154/321 (47%), Gaps = 39/321 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 343
           FK+++++  +QY+  E    R + F     K + H K     +   ++FSD S +EI  K
Sbjct: 35  FKSWMMQHQKQYSAKEH-HHRQQTFARNWKKINAHNKGNHTFKMALNQFSDMSFDEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +             GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  RKYLWSEP--QNCSATKSNY------FRGTGPYPTSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI +GK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAVAIASGKMLSLAEQQLVDCAQDFNNHGCEGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G    C +   K   F  KD   +  N  E M + +  Y P+S         
Sbjct: 204 TYPYQGKDGH---CRFQPQKAIAFV-KDVVNITLNDEEAMVEAVALYNPVSFAFEVTEDF 259

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
            S+    Y+ T   K     +P  + HAVL VGYG Q+ +PYW+ +NSWG     +G+F 
Sbjct: 260 ISYQSGIYSSTSCHK-----TPDKVNHAVLAVGYGVQNGVPYWIVKNSWGTAWGQDGYFL 314

Query: 573 IERGNNACGIEQIAGYATIDV 593
           IERG N CG+   A +    V
Sbjct: 315 IERGKNMCGLAACASFPIPQV 335



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 121/229 (52%), Gaps = 17/229 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI +GK++  ++ QLV+CA
Sbjct: 114 GPYPTSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAVAIASGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC+G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD +
Sbjct: 174 QDFNNHGCEGGLPSQAFEYILYNKGIMGEDTYPYQGKDGH---CRFQPQKAIAFV-KDVV 229

Query: 125 H--FNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +   N  E M + +  Y P+S    +  D I   +G     +  +C  +P  + HAVL V
Sbjct: 230 NITLNDEEAMVEAVALYNPVSFAFEVTEDFISYQSGI---YSSTSCHKTPDKVNHAVLAV 286

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           GYG Q+ +PYW+V+NSWG     +G+F IERG N CG+   A +    V
Sbjct: 287 GYGVQNGVPYWIVKNSWGTAWGQDGYFLIERGKNMCGLAACASFPIPQV 335



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 39/61 (63%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            +P  + HAVL VGYG Q+ +PYW+V+NSWG     +G+F IERG N CG+   A +    
Sbjct: 275  TPDKVNHAVLAVGYGVQNGVPYWIVKNSWGTAWGQDGYFLIERGKNMCGLAACASFPIPQ 334

Query: 1026 V 1026
            V
Sbjct: 335  V 335


>gi|258406688|gb|ACV72067.1| putative cysteine protease [Lathyrus sativus]
          Length = 350

 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 151/317 (47%), Gaps = 34/317 (10%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G+ Y + +E+K RF+ F ++       +K+   Y  G + F+D        
Sbjct: 50  SFARFANRYGKLYDSVDEMKLRFKIFSENLELIRSTNKRRLSYKLGVNHFAD-------- 101

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 766
              + W E    R+ A  +     L    K  D  +PD  DWRK+ +     DQ  CGSC
Sbjct: 102 ---WTWEEFKSHRLGA-AQNCSATLKGNHKITDANLPDEKDWRKEGIVSEVKDQGHCGSC 157

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLES 823
           W FS  G LE  YA   GK +  S+ QLV+CA   +  GC G     + EY  +  GLE+
Sbjct: 158 WTFSTTGALESAYAQAFGKNISLSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLET 217

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 882
           E+ YPY  +NG    C +    V L   G   +     + +K  +    P+SV    +++
Sbjct: 218 EETYPYTGSNG---LCKFTSENVALKVLGSVNITLGSEDELKHAVAFARPVSVAF--EVV 272

Query: 883 HDYNGTPIRKNDETC---SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           HD+          T    +P D+ HAVL VGYG +D IPYW ++NSWG    D G+FK+E
Sbjct: 273 HDFRLYKSGVYTSTACGNTPMDVNHAVLAVGYGIEDGIPYWHIKNSWGGDWGDHGYFKME 332

Query: 940 RGNNACGIEQIAGYATI 956
            G N CG+   + Y  +
Sbjct: 333 MGKNMCGVATCSSYPVV 349



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 144/315 (45%), Gaps = 29/315 (9%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G+ Y + +E+K RF+ F ++       +K+   Y  G + F+D        
Sbjct: 50  SFARFANRYGKLYDSVDEMKLRFKIFSENLELIRSTNKRRLSYKLGVNHFAD-------- 101

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 400
              + W E    R+ A  +     L    K  D  +PD  DWRK+ +     DQ  CGSC
Sbjct: 102 ---WTWEEFKSHRLGA-AQNCSATLKGNHKITDANLPDEKDWRKEGIVSEVKDQGHCGSC 157

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLES 458
           W FS  G LE  YA   GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GLE+
Sbjct: 158 WTFSTTGALESAYAQAFGKNISLSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLET 217

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSVGLNS-HL 516
           E+ YPY   NG    C +    V L   G   +     + +K  +    P+SV     H 
Sbjct: 218 EETYPYTGSNG---LCKFTSENVALKVLGSVNITLGSEDELKHAVAFARPVSVAFEVVHD 274

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y            +P D+ HAVL VGYG +D IPYW  +NSWG    D G+FK+E G
Sbjct: 275 FRLYKSGVYTSTACGNTPMDVNHAVLAVGYGIEDGIPYWHIKNSWGGDWGDHGYFKMEMG 334

Query: 577 NNACGIEQIAGYATI 591
            N CG+   + Y  +
Sbjct: 335 KNMCGVATCSSYPVV 349



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 115/225 (51%), Gaps = 12/225 (5%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +PD  DWRK+ +     DQ  CGSCW FS  G LE  YA   GK +  S+ QLV+CA
Sbjct: 130 DANLPDEKDWRKEGIVSEVKDQGHCGSCWTFSTTGALESAYAQAFGKNISLSEQQLVDCA 189

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDF 123
              +  GC G     + EY  +  GLE+E+ YPY  +NG    C +    V L   G   
Sbjct: 190 GAFNNFGCSGGLPSQAFEYIKYNGGLETEETYPYTGSNG---LCKFTSENVALKVLGSVN 246

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC---SPYDLGHAVLLVGY 180
           +     + +K  +    P+SV    +++HD+          T    +P D+ HAVL VGY
Sbjct: 247 ITLGSEDELKHAVAFARPVSVAF--EVVHDFRLYKSGVYTSTACGNTPMDVNHAVLAVGY 304

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           G +D IPYW ++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 305 GIEDGIPYWHIKNSWGGDWGDHGYFKMEMGKNMCGVATCSSYPVV 349


>gi|3377952|emb|CAA08906.1| cysteine proteinase [Cicer arietinum]
          Length = 362

 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 156/323 (48%), Gaps = 39/323 (12%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 704
           N    F  F  K  + YA  EE   RF  FK +  K   H++      +G ++FSD +  
Sbjct: 42  NAEHHFTTFKSKFSKSYATKEEHDYRFGVFKSNLKKAKLHQKLDPSAEHGVTKFSDLTAS 101

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E   +  F   ++   R+ A  +K       +     +P+ +DWR+K    P  DQ +CG
Sbjct: 102 EF--RRQFLGLKKRL-RLPAHAQKAP-----ILPTNNLPEDFDWREKGAVTPVKDQGSCG 153

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCWAFS  G LEG   + TGKLV  S+ QLV+C   C         SGC+G     + EY
Sbjct: 154 SCWAFSTTGALEGANYLATGKLVSLSEQQLVDCDHVCDPDEYNSCDSGCNGGLMNNAFEY 213

Query: 816 THQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
             Q+ G+  E+DY Y   +G    C +DKSK+        +     + +   L K GPL+
Sbjct: 214 LLQSGGVVREQDYSYTGRDGS---CKFDKSKIAASVSNFSVVSVDEDQIAANLVKNGPLA 270

Query: 875 VLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYG------KQDNIPYWLVRNSWG 927
           V +N+  +  Y +G         C+   L H VLLVG+G      +    PYW+++NSWG
Sbjct: 271 VAINAAWMQTYMSGVSC---PYICAKSRLDHGVLLVGFGNGFAPIRLKEKPYWIIKNSWG 327

Query: 928 PIGPDEGFFKIERGNNACGIEQI 950
               +EG++KI RG N CG++ +
Sbjct: 328 QNWGEEGYYKICRGRNICGVDSM 350



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 157/323 (48%), Gaps = 38/323 (11%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 338
           N    F  F  K  + YA  EE   RF  FK +  K   H++      +G ++FSD +  
Sbjct: 42  NAEHHFTTFKSKFSKSYATKEEHDYRFGVFKSNLKKAKLHQKLDPSAEHGVTKFSDLTAS 101

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E   +  F   ++   R+ A  +K       +     +P+ +DWR+K    P  DQ +CG
Sbjct: 102 EF--RRQFLGLKKRL-RLPAHAQKAP-----ILPTNNLPEDFDWREKGAVTPVKDQGSCG 153

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEY 450
           SCWAFS  G LEG   + TGKLV  S+ QLV+C   C     + C  GC+G  +    EY
Sbjct: 154 SCWAFSTTGALEGANYLATGKLVSLSEQQLVDCDHVCDPDEYNSCDSGCNGGLMNNAFEY 213

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
             Q+ G+  E+DY Y   +G    C +DKSK+        +     + +   L K GPL+
Sbjct: 214 LLQSGGVVREQDYSYTGRDGS---CKFDKSKIAASVSNFSVVSVDEDQIAANLVKNGPLA 270

Query: 510 VGLNSHLIHFY-NGTPIRKNDETCSPYDLGHAVLLVGYG------KQDDIPYWLARNSWG 562
           V +N+  +  Y +G         C+   L H VLLVG+G      +  + PYW+ +NSWG
Sbjct: 271 VAINAAWMQTYMSGVSC---PYICAKSRLDHGVLLVGFGNGFAPIRLKEKPYWIIKNSWG 327

Query: 563 PIGPDEGFFKIERGNNACGIEQI 585
               +EG++KI RG N CG++ +
Sbjct: 328 QNWGEEGYYKICRGRNICGVDSM 350



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 118/226 (52%), Gaps = 23/226 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K    P  DQ  CGSCWAFS  G LEG   + TGKLV  S+ QLV+C   C
Sbjct: 131 LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLVSLSEQQLVDCDHVC 190

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  Q+ G+  E+DY Y   +G    C +DKSK+     
Sbjct: 191 DPDEYNSCDSGCNGGLMNNAFEYLLQSGGVVREQDYSYTGRDGS---CKFDKSKIAASVS 247

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVG 179
              +     + +   L K GPL+V +N+  +  Y +G         C+   L H VLLVG
Sbjct: 248 NFSVVSVDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSC---PYICAKSRLDHGVLLVG 304

Query: 180 YG------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           +G      +    PYW+++NSWG    +EG++KI RG N CG++ +
Sbjct: 305 FGNGFAPIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNICGVDSM 350



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 6/60 (10%)

Query: 965  CSPYDLGHAVLLVGYG------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            C+   L H VLLVG+G      +  + PYW+++NSWG    +EG++KI RG N CG++ +
Sbjct: 291  CAKSRLDHGVLLVGFGNGFAPIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNICGVDSM 350


>gi|297824991|ref|XP_002880378.1| hypothetical protein ARALYDRAFT_481008 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326217|gb|EFH56637.1| hypothetical protein ARALYDRAFT_481008 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 360

 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 173/383 (45%), Gaps = 69/383 (18%)

Query: 603 KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 662
           + +  +  +F+   V+ C     L  ++ D+   +V  L+ E           + F  F 
Sbjct: 5   RVLFSVSLLFVFVSVSICGDEDLLIRQVVDEAEPKV--LSSE-----------DHFTLFK 51

Query: 663 VKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEEILCKT---- 710
            K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E   K     
Sbjct: 52  KKFGKDYGSIEEHYYRFSVFKANLRRAMRHQKMDPSARHGVTQFSDLTGSEFRRKHLGVT 111

Query: 711 -GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
            GFK  +   +  +     +             P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 112 GGFKLPKDANQAPILPTHNL-------------PEEFDWRDRGAVTPVKNQGSCGSCWSF 158

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG + + TGKLV  S+ QLV+C  +C         SGC+G     + EYT +  
Sbjct: 159 STTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTG 218

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+DYPY   +G    C  D+SK+        +     + +   L K GPL+V +N+
Sbjct: 219 GLMREEDYPYTGTDGG--SCKLDRSKIVASVSNFSVVSINEDQIAANLVKNGPLAVAINA 276

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLL+GYG       +    PYW+++NSWG 
Sbjct: 277 AYMQTYIGG-------VSCPYICSRRLNHGVLLMGYGSSGYSQARLKEKPYWIIKNSWGE 329

Query: 929 IGPDEGFFKIERGNNACGIEQIA 951
              + GF+KI +G N CG++ + 
Sbjct: 330 SWGENGFYKICKGRNICGVDSLV 352



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 173/383 (45%), Gaps = 68/383 (17%)

Query: 237 KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 296
           + +  +  +F+   V+ C     L  ++ D+   +V  L+ E           + F  F 
Sbjct: 5   RVLFSVSLLFVFVSVSICGDEDLLIRQVVDEAEPKV--LSSE-----------DHFTLFK 51

Query: 297 VKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEEILCKT---- 344
            K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E   K     
Sbjct: 52  KKFGKDYGSIEEHYYRFSVFKANLRRAMRHQKMDPSARHGVTQFSDLTGSEFRRKHLGVT 111

Query: 345 -GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
            GFK  +   +  +     +             P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 112 GGFKLPKDANQAPILPTHNL-------------PEEFDWRDRGAVTPVKNQGSCGSCWSF 158

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG + + TGKLV  S+ QLV+C  +C      S   GC+G  +    EYT +  
Sbjct: 159 STTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTG 218

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+DYPY   +G    C  D+SK+        +     + +   L K GPL+V +N+
Sbjct: 219 GLMREEDYPYTGTDGG--SCKLDRSKIVASVSNFSVVSINEDQIAANLVKNGPLAVAINA 276

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLL+GYG       +  + PYW+ +NSWG 
Sbjct: 277 AYMQTYIGG-------VSCPYICSRRLNHGVLLMGYGSSGYSQARLKEKPYWIIKNSWGE 329

Query: 564 IGPDEGFFKIERGNNACGIEQIA 586
              + GF+KI +G N CG++ + 
Sbjct: 330 SWGENGFYKICKGRNICGVDSLV 352



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 117/231 (50%), Gaps = 30/231 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR +    P  +Q  CGSCW+FS  G LEG + + TGKLV  S+ QLV+C  +C
Sbjct: 131 LPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHEC 190

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +  GL  E+DYPY   +G    C  D+SK+     
Sbjct: 191 DPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGTDGG--SCKLDRSKIVASVS 248

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 249 NFSVVSINEDQIAANLVKNGPLAVAINAAYMQTYIGG-------VSCPYICSRRLNHGVL 301

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           L+GYG       +    PYW+++NSWG    + GF+KI +G N CG++ + 
Sbjct: 302 LMGYGSSGYSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLV 352



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 7/57 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 1019
            L H VLL+GYG       +  + PYW+++NSWG    + GF+KI +G N CG++ + 
Sbjct: 296  LNHGVLLMGYGSSGYSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLV 352


>gi|1706261|sp|Q10717.1|CYSP2_MAIZE RecName: Full=Cysteine proteinase 2; Flags: Precursor
 gi|644490|dbj|BAA08245.1| cysteine proteinase [Zea mays]
          Length = 360

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 170/377 (45%), Gaps = 31/377 (8%)

Query: 593 VVIQRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNE 652
           +V +RL +    ++   A  +  G A    +  +TDR    + + V   A  G       
Sbjct: 1   MVPRRLFVLAVVVLADTAAVVNSGFADSNPIRPVTDRAASALESTV--FAALGR----TR 54

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPE 704
           + L  F  F V+ G+ Y +  E+ +RF  F +               R G + F+D S E
Sbjct: 55  DALR-FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWE 113

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E    T    ++     +  +       +        +P+  DWR+  +  P  +Q  CG
Sbjct: 114 EFRA-TRLGAAQNCSATLTGNHRMRAAAV-------ALPETKDWREDGIVSPVKNQGHCG 165

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSIEYT-HQAGL 821
           SCW FS  G LE  Y   TGK +  S+ QLV+C  A    GC+G     + EY  +  GL
Sbjct: 166 SCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGL 225

Query: 822 ESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           ++E+ YPY+  NG  KFK   +   VK+    + +     + +K  +    P+SV     
Sbjct: 226 DTEESYPYQGVNGICKFK--NENVGVKVLDSVN-ITLGAEDELKDAVGLVRPVSVAFEVI 282

Query: 881 LIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
                  + +  +D    +P D+ HAVL VGYG +D +PYWL++NSWG    DEG+FK+E
Sbjct: 283 TGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKME 342

Query: 940 RGNNACGIEQIAGYATI 956
            G N CG+   A Y  +
Sbjct: 343 MGKNMCGVATCASYPIV 359



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 166/377 (44%), Gaps = 30/377 (7%)

Query: 227 VVIQRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNE 286
           +V +RL +    ++   A  +  G A    +  +TDR    + + V   A  G       
Sbjct: 1   MVPRRLFVLAVVVLADTAAVVNSGFADSNPIRPVTDRAASALESTV--FAALGR----TR 54

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPE 338
           + L  F  F V+ G+ Y +  E+ +RF  F +               R G + F+D S E
Sbjct: 55  DALR-FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWE 113

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E    T    ++     +  +       +        +P+  DWR+  +  P  +Q  CG
Sbjct: 114 EFRA-TRLGAAQNCSATLTGNHRMRAAAV-------ALPETKDWREDGIVSPVKNQGHCG 165

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGL 456
           SCW FS  G LE  Y   TGK +  S+ QLV+C    +  G   GL  Q  EY  +  GL
Sbjct: 166 SCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGL 225

Query: 457 ESEKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           ++E+ YPY+  NG  KFK   +   VK+    + +     + +K  +    P+SV     
Sbjct: 226 DTEESYPYQGVNGICKFK--NENVGVKVLDSVN-ITLGAEDELKDAVGLVRPVSVAFEVI 282

Query: 516 L-IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
                Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    DEG+FK+E
Sbjct: 283 TGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKME 342

Query: 575 RGNNACGIEQIAGYATI 591
            G N CG+   A Y  +
Sbjct: 343 MGKNMCGVATCASYPIV 359



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 116/220 (52%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 68
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK +  S+ QLV+C  A 
Sbjct: 143 LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAF 202

Query: 69  QCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHF 126
              GC+G     + EY  +  GL++E+ YPY+  NG  KFK   +   VK+    + +  
Sbjct: 203 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFK--NENVGVKVLDSVN-ITL 259

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDN 185
              + +K  +    P+SV            + +  +D    +P D+ HAVL VGYG +D 
Sbjct: 260 GAEDELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDG 319

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 320 VPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 41/59 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +P D+ HAVL VGYG +D +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 301  TPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359


>gi|312282841|dbj|BAJ34286.1| unnamed protein product [Thellungiella halophila]
          Length = 358

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 151/314 (48%), Gaps = 28/314 (8%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y N EEIK RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNAEEIKLRFSIFKENLDLIRSTNKKRLSYKLGVNQFADLTWQE--- 114

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
              F+ ++    +  +   K    L E      +P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 115 ---FQRNKLGAAQNCSATLKGSHKLTE----AALPETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA   +  GC+G     + EY     GL++E+
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEE 227

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
            YPY   +G    C Y    V +       +     + +K  +    P+S+         
Sbjct: 228 AYPYTGKDG---TCKYSAENVGVQVLDSVNITLGAEDELKHAVGLVRPVSIAFEVVKSFR 284

Query: 885 YNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
              + +   D  C  +P D+ HAVL VGYG +D +PYWL++NSWG    D+G+FK+E G 
Sbjct: 285 LYKSGVY-TDSHCGNTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGADWGDKGYFKMEMGK 343

Query: 943 NACGIEQIAGYATI 956
           N CGI   A Y  +
Sbjct: 344 NMCGIATCASYPVV 357



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 148/313 (47%), Gaps = 25/313 (7%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y N EEIK RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNAEEIKLRFSIFKENLDLIRSTNKKRLSYKLGVNQFADLTWQE--- 114

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
              F+ ++    +  +   K    L E      +P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 115 ---FQRNKLGAAQNCSATLKGSHKLTE----AALPETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY     GL++E+
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEE 227

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-HLIH 518
            YPY   +G    C Y    V +          G+E  +K  +    P+S+         
Sbjct: 228 AYPYTGKDG---TCKYSAENVGVQVLDSVNITLGAEDELKHAVGLVRPVSIAFEVVKSFR 284

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    D+G+FK+E G N
Sbjct: 285 LYKSGVYTDSHCGNTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGADWGDKGYFKMEMGKN 344

Query: 579 ACGIEQIAGYATI 591
            CGI   A Y  +
Sbjct: 345 MCGIATCASYPVV 357



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 111/224 (49%), Gaps = 10/224 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y    GK +  S+ QLV+CA
Sbjct: 138 EAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCA 197

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
              +  GC+G     + EY     GL++E+ YPY   +G    C Y    V +       
Sbjct: 198 GAFNNYGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKDG---TCKYSAENVGVQVLDSVN 254

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYG 181
           +     + +K  +    P+S+            + +   D  C  +P D+ HAVL VGYG
Sbjct: 255 ITLGAEDELKHAVGLVRPVSIAFEVVKSFRLYKSGVY-TDSHCGNTPMDVNHAVLAVGYG 313

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +D +PYWL++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 314 IEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVV 357


>gi|33945878|emb|CAE45589.1| papain-like cysteine proteinase-like protein 2 [Lotus japonicus]
          Length = 361

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 150/323 (46%), Gaps = 48/323 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 709
           F  F  + G+ YA +EE   RF  FK + H+            +G + FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTRFSDLTPME---- 100

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CGSCW+F
Sbjct: 101 --FRHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWREHGAVTPVKNQGSCGSCWSF 155

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVEC-AKQC---------SGCDGCFFEPSIEYT-HQ 818
           S  G LEG + + TGKLV  S+ QLV+C  +QC         SGC G     + EY  + 
Sbjct: 156 SATGALEGAHFLSTGKLVSLSEQQLVDCDHEQCDPEEAGSCDSGCKGGLMNSAFEYILNN 215

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
            G+  E+DYPY    G    C +D++K+        +     + +   L K GPL+V +N
Sbjct: 216 GGVMREEDYPYSGTAGG--TCKFDQTKIAASVANFSVVSRDEDQIAANLVKNGPLAVAIN 273

Query: 879 SDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQD-------NIPYWLVRNSWG 927
           +  +  Y G           PY     L H VLLVGYG +          PYW+++NSWG
Sbjct: 274 AVYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWG 326

Query: 928 PIGPDEGFFKIERGNNACGIEQI 950
               + G++KI RG N CG++ +
Sbjct: 327 ENWGENGYYKICRGRNVCGVDSM 349



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 148/323 (45%), Gaps = 47/323 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 343
           F  F  + G+ YA +EE   RF  FK + H+            +G + FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTRFSDLTPME---- 100

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CGSCW+F
Sbjct: 101 --FRHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWREHGAVTPVKNQGSCGSCWSF 155

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVEC-AKQCSG--CGGCDG------LEQPIEYT-HQ 453
           S  G LEG + + TGKLV  S+ QLV+C  +QC     G CD       +    EY  + 
Sbjct: 156 SATGALEGAHFLSTGKLVSLSEQQLVDCDHEQCDPEEAGSCDSGCKGGLMNSAFEYILNN 215

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
            G+  E+DYPY    G    C +D++K+        +     + +   L K GPL+V +N
Sbjct: 216 GGVMREEDYPYSGTAGG--TCKFDQTKIAASVANFSVVSRDEDQIAANLVKNGPLAVAIN 273

Query: 514 SHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQD-------DIPYWLARNSWG 562
           +  +  Y G           PY     L H VLLVGYG +          PYW+ +NSWG
Sbjct: 274 AVYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWG 326

Query: 563 PIGPDEGFFKIERGNNACGIEQI 585
               + G++KI RG N CG++ +
Sbjct: 327 ENWGENGYYKICRGRNVCGVDSM 349



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 115/231 (49%), Gaps = 31/231 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC-AKQ 69
           +P  +DWR+     P  +Q  CGSCW+FS  G LEG + + TGKLV  S+ QLV+C  +Q
Sbjct: 128 LPKDFDWREHGAVTPVKNQGSCGSCWSFSATGALEGAHFLSTGKLVSLSEQQLVDCDHEQ 187

Query: 70  C---------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
           C         SGC G     + EY  +  G+  E+DYPY    G    C +D++K+    
Sbjct: 188 CDPEEAGSCDSGCKGGLMNSAFEYILNNGGVMREEDYPYSGTAGG--TCKFDQTKIAASV 245

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 175
               +     + +   L K GPL+V +N+  +  Y G           PY     L H V
Sbjct: 246 ANFSVVSRDEDQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYVCSKKLNHGV 298

Query: 176 LLVGYGKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LLVGYG +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 299 LLVGYGSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 349



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYGKQD-------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 294  LNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 349


>gi|440910969|gb|ELR60703.1| Cathepsin H, partial [Bos grunniens mutus]
          Length = 329

 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 161/314 (51%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHE-RYGTSEFSDRSPEEILCK 709
           F++++V+  ++Y++ EE   R + F  +         + H  + G ++FSD S +E+  K
Sbjct: 29  FQSWMVQHQKKYSS-EEYYHRLQVFASNLREINAHNARNHTFKMGLNQFSDMSFDEL--K 85

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 86  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWT 137

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGKL   ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 138 FSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 197

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G+   C Y  SK   F  KD   +  N  E M + +  + P+S    + +D 
Sbjct: 198 TYPYRGQDGD---CKYQPSKAIAFV-KDVANITLNDEEAMVEAVALHNPVSFAFEVTADF 253

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG++  IPYW+V+NSWGP    +G+F IE
Sbjct: 254 MMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIE 310

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A +
Sbjct: 311 RGKNMCGLAACASF 324



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 160/314 (50%), Gaps = 35/314 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHE-RYGTSEFSDRSPEEILCK 343
           F++++V+  ++Y++ EE   R + F  +         + H  + G ++FSD S +E+  K
Sbjct: 29  FQSWMVQHQKKYSS-EEYYHRLQVFASNLREINAHNARNHTFKMGLNQFSDMSFDEL--K 85

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 86  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWT 137

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGKL   ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 138 FSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 197

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVG--LNSHL 516
            YPYR  +G+   C Y  SK   F  KD   +  N  E M + +  + P+S    + +  
Sbjct: 198 TYPYRGQDGD---CKYQPSKAIAFV-KDVANITLNDEEAMVEAVALHNPVSFAFEVTADF 253

Query: 517 IHFYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
           + +  G     +  +C  +P  + HAVL VGYG++  IPYW+ +NSWGP    +G+F IE
Sbjct: 254 MMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIE 310

Query: 575 RGNNACGIEQIAGY 588
           RG N CG+   A +
Sbjct: 311 RGKNMCGLAACASF 324



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 120/224 (53%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL   ++ QLV+CA
Sbjct: 108 GPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCA 167

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPY+  +G+   C Y  SK   F  KD  
Sbjct: 168 QNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGD---CKYQPSKAIAFV-KDVA 223

Query: 124 -LHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
            +  N  E M + +  + P+S    + +D +    G     +  +C  +P  + HAVL V
Sbjct: 224 NITLNDEEAMVEAVALHNPVSFAFEVTADFMMYRKGI---YSSTSCHKTPDKVNHAVLAV 280

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG++  IPYW+V+NSWGP    +G+F IERG N CG+   A +
Sbjct: 281 GYGEEKGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACASF 324



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG++  IPYW+V+NSWGP    +G+F IERG N CG+   A +
Sbjct: 269  TPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACASF 324


>gi|15320768|ref|NP_203280.1| V-CATH [Epiphyas postvittana NPV]
 gi|37077652|sp|Q91GE3.1|CATV_NPVEP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|15213236|gb|AAK85675.1| V-CATH [Epiphyas postvittana NPV]
          Length = 323

 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 32/314 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 709
           F+ F+ +  +QY ++ E   R++ F+ +              Y  ++FSD S +E + K 
Sbjct: 28  FEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRNDTAVYKINKFSDLSKDETIAKY 87

Query: 710 TGFKWSERTY---ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
           TG      T    E +V DR             G  P  +DWR+ N      +Q  CG+C
Sbjct: 88  TGLSLPLHTQNFCEVVVLDRPP-----------GKGPLEFDWRRFNKITSVKNQGMCGAC 136

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEK 825
           WAF+    LE Q+AI   +L+  S+ Q+++C     GC+G     + E      G++ E 
Sbjct: 137 WAFATLASLESQFAIAHDRLINLSEQQMIDCDSVDVGCEGGLLHTAFEAIISMGGVQIEN 196

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSETMKKILYKYGPLSVLLNSDLIHD 884
           DYPY+++N     C  D +K  +   +   +     E +K +L   GP+ V +++  I +
Sbjct: 197 DYPYESSNN---YCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILN 253

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    I+     C+   L HAVLLVGYG ++N+PYW+++NSWG    ++GFFKI++  NA
Sbjct: 254 YEQGIIK----YCANNGLNHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNVNA 309

Query: 945 CGIE-QIAGYATID 957
           CGI+ ++A  A I+
Sbjct: 310 CGIKNELASTAEIN 323



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 154/315 (48%), Gaps = 33/315 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 343
           F+ F+ +  +QY ++ E   R++ F+ +              Y  ++FSD S +E + K 
Sbjct: 28  FEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRNDTAVYKINKFSDLSKDETIAKY 87

Query: 344 TGFKWSERTY---ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
           TG      T    E +V DR             G  P  +DWR+ N      +Q  CG+C
Sbjct: 88  TGLSLPLHTQNFCEVVVLDRPP-----------GKGPLEFDWRRFNKITSVKNQGMCGAC 136

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIE-YTHQAGLESE 459
           WAF+    LE Q+AI   +L+  S+ Q+++C     GC G   L    E      G++ E
Sbjct: 137 WAFATLASLESQFAIAHDRLINLSEQQMIDCDSVDVGCEG-GLLHTAFEAIISMGGVQIE 195

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN-GSETMKKILYKYGPLSVGLNSHLIH 518
            DYPY + N     C  D +K  +   +   Y     E +K +L   GP+ V +++  I 
Sbjct: 196 NDYPYESSNN---YCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDIL 252

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    I+     C+   L HAVLLVGYG ++++PYW+ +NSWG    ++GFFKI++  N
Sbjct: 253 NYEQGIIK----YCANNGLNHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNVN 308

Query: 579 ACGIE-QIAGYATID 592
           ACGI+ ++A  A I+
Sbjct: 309 ACGIKNELASTAEIN 323



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 123/221 (55%), Gaps = 10/221 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+    LE Q+AI   +L+  S+ Q+++C  
Sbjct: 110 GKGPLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCDS 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              GC+G     + E      G++ E DYPY+++N     C  D +K  +   +   +  
Sbjct: 170 VDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNN---YCRMDPTKFVVGVKQCNRYIT 226

Query: 128 -GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
              E +K +L   GP+ V +++  I +Y    I+     C+   L HAVLLVGYG ++N+
Sbjct: 227 IYEEKLKDVLRLAGPIPVAIDASDILNYEQGIIK----YCANNGLNHAVLLVGYGVENNV 282

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATID 226
           PYW+++NSWG    ++GFFKI++  NACGI+ ++A  A I+
Sbjct: 283 PYWILKNSWGTDWGEQGFFKIQQNVNACGIKNELASTAEIN 323



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C+   L HAVLLVGYG ++++PYW+++NSWG    ++GFFKI++  NACGI+ ++A  A 
Sbjct: 262  CANNGLNHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNVNACGIKNELASTAE 321

Query: 1024 ID 1025
            I+
Sbjct: 322  IN 323


>gi|162460343|ref|NP_001105479.1| cysteine protease2 precursor [Zea mays]
 gi|1491774|emb|CAA68192.1| cysteine protease [Zea mays]
          Length = 360

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 146/312 (46%), Gaps = 24/312 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           F  F V+ G+ Y +  E+ +RF  F +               R G + F+D S EE    
Sbjct: 59  FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRA- 117

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           T    ++     +  +       +        +P+  DWR+  +  P  +Q  CGSCW F
Sbjct: 118 TRLGAAQNCSATLTGNHRMRAAAV-------ALPETKDWREDGIVSPVKNQGHCGSCWTF 170

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSIEYT-HQAGLESEKD 826
           S  G LE  Y   TGK +  S+ QLV+C  A    GC+G     + EY  +  GL++E+ 
Sbjct: 171 STTGALEAAYTQATGKPISLSEQQLVDCGLAFNNFGCNGGLPSQAFEYIKYNGGLDTEES 230

Query: 827 YPYKNANG-EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           YPY+  NG  KFK   +   VK+    + +     + +K  +    P+SV          
Sbjct: 231 YPYQGVNGISKFK--NENVGVKVLDSVN-ITLGAEDELKDAVGLVRPVSVAFEVITGFRL 287

Query: 886 NGTPIRKNDET-CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
             + +  +D    +P D+ HAVL VGYG +D +PYWL++NSWG    DEG+FK+E G N 
Sbjct: 288 YKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNM 347

Query: 945 CGIEQIAGYATI 956
           CG+   A Y  +
Sbjct: 348 CGVATCASYPIV 359



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 142/312 (45%), Gaps = 23/312 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           F  F V+ G+ Y +  E+ +RF  F +               R G + F+D S EE    
Sbjct: 59  FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRA- 117

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           T    ++     +  +       +        +P+  DWR+  +  P  +Q  CGSCW F
Sbjct: 118 TRLGAAQNCSATLTGNHRMRAAAV-------ALPETKDWREDGIVSPVKNQGHCGSCWTF 170

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKD 461
           S  G LE  Y   TGK +  S+ QLV+C    +  G   GL  Q  EY  +  GL++E+ 
Sbjct: 171 STTGALEAAYTQATGKPISLSEQQLVDCGLAFNNFGCNGGLPSQAFEYIKYNGGLDTEES 230

Query: 462 YPYRNGNG-EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL-IHF 519
           YPY+  NG  KFK   +   VK+    + +     + +K  +    P+SV          
Sbjct: 231 YPYQGVNGISKFK--NENVGVKVLDSVN-ITLGAEDELKDAVGLVRPVSVAFEVITGFRL 287

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
           Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    DEG+FK+E G N 
Sbjct: 288 YKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNM 347

Query: 580 CGIEQIAGYATI 591
           CG+   A Y  +
Sbjct: 348 CGVATCASYPIV 359



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 116/220 (52%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 68
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK +  S+ QLV+C  A 
Sbjct: 143 LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGLAF 202

Query: 69  QCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANG-EKFKCAYDKSKVKLFTGKDFLHF 126
              GC+G     + EY  +  GL++E+ YPY+  NG  KFK   +   VK+    + +  
Sbjct: 203 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGISKFK--NENVGVKVLDSVN-ITL 259

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDN 185
              + +K  +    P+SV            + +  +D    +P D+ HAVL VGYG +D 
Sbjct: 260 GAEDELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDG 319

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 320 VPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 41/59 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +P D+ HAVL VGYG +D +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 301  TPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359


>gi|47779249|gb|AAT38521.1| cysteine protease [Bombyx mori NPV]
          Length = 323

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 28/337 (8%)

Query: 632 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 685
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 686 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 804 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--NGS 860
           C+G     + E      G++ E DYPY+  N     C  + +K  L   KD   +     
Sbjct: 174 CNGGLLHTAFEANCRMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYIIVYE 229

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++NIPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 956
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 165/337 (48%), Gaps = 27/337 (8%)

Query: 266 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 319
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 320 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 438 CGGCDGLEQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGS 495
           C G   L    E      G++ E DYPY   N     C  + +K  +     + Y     
Sbjct: 174 CNG-GLLHTAFEANCRMGGVQLESDYPYEADNN---NCRMNSNKFLVQVKDCYRYIIVYE 229

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           E +K +L   GP+ + +++  I  Y    I+     C    L HAVLLVGYG +++IPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 591
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 120/221 (54%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C  
Sbjct: 110 GKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF 169

Query: 69  QCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G     + E      G++ E DYPY+  N     C  + +K  L   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEANCRMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYI 225

Query: 127 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 282 IPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IPYW  +N+WG    ++GFF++++  NACG+  ++A  A 
Sbjct: 262  CFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAV 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|77735725|ref|NP_001029557.1| pro-cathepsin H precursor [Bos taurus]
 gi|115312126|sp|Q3T0I2.1|CATH_BOVIN RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|74267711|gb|AAI02387.1| Cathepsin H [Bos taurus]
 gi|296475480|tpg|DAA17595.1| TPA: cathepsin H precursor [Bos taurus]
          Length = 335

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 161/314 (51%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHE-RYGTSEFSDRSPEEILCK 709
           F++++V+  ++Y++ EE   R + F  +         + H  + G ++FSD S +E+  K
Sbjct: 35  FQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDEL--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 92  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGKL   ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G+   C Y  SK   F  KD   +  N  E M + +  + P+S    + +D 
Sbjct: 204 TYPYRGQDGD---CKYQPSKAIAFV-KDVANITLNDEEAMVEAVALHNPVSFAFEVTADF 259

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG++  IPYW+V+NSWGP    +G+F IE
Sbjct: 260 MMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIE 316

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A +
Sbjct: 317 RGKNMCGLAACASF 330



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 160/314 (50%), Gaps = 35/314 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHE-RYGTSEFSDRSPEEILCK 343
           F++++V+  ++Y++ EE   R + F  +         + H  + G ++FSD S +E+  K
Sbjct: 35  FQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDEL--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 92  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGKL   ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVG--LNSHL 516
            YPYR  +G+   C Y  SK   F  KD   +  N  E M + +  + P+S    + +  
Sbjct: 204 TYPYRGQDGD---CKYQPSKAIAFV-KDVANITLNDEEAMVEAVALHNPVSFAFEVTADF 259

Query: 517 IHFYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
           + +  G     +  +C  +P  + HAVL VGYG++  IPYW+ +NSWGP    +G+F IE
Sbjct: 260 MMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIE 316

Query: 575 RGNNACGIEQIAGY 588
           RG N CG+   A +
Sbjct: 317 RGKNMCGLAACASF 330



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 120/224 (53%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL   ++ QLV+CA
Sbjct: 114 GPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPY+  +G+   C Y  SK   F  KD  
Sbjct: 174 QNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGD---CKYQPSKAIAFV-KDVA 229

Query: 124 -LHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
            +  N  E M + +  + P+S    + +D +    G     +  +C  +P  + HAVL V
Sbjct: 230 NITLNDEEAMVEAVALHNPVSFAFEVTADFMMYRKGI---YSSTSCHKTPDKVNHAVLAV 286

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG++  IPYW+V+NSWGP    +G+F IERG N CG+   A +
Sbjct: 287 GYGEEKGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACASF 330



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG++  IPYW+V+NSWGP    +G+F IERG N CG+   A +
Sbjct: 275  TPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACASF 330


>gi|31981819|ref|NP_034115.2| cathepsin W preproprotein [Mus musculus]
 gi|341940311|sp|P56203.2|CATW_MOUSE RecName: Full=Cathepsin W; AltName: Full=Lymphopain; Flags:
           Precursor
 gi|26353368|dbj|BAC40314.1| unnamed protein product [Mus musculus]
 gi|44890089|gb|AAS48498.1| cathepsin W precursor [Mus musculus]
 gi|148701190|gb|EDL33137.1| cathepsin W, isoform CRA_b [Mus musculus]
 gi|162317774|gb|AAI56226.1| Cathepsin W [synthetic construct]
 gi|162318342|gb|AAI56999.1| Cathepsin W [synthetic construct]
          Length = 371

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 166/343 (48%), Gaps = 40/343 (11%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y N  E   R   F     Q    + E  GT+EF     SD + EE 
Sbjct: 38  EVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEF 97

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G    ER+ ER     +KVE           VP   DWRK KN+     +Q +C  
Sbjct: 98  GQLYG---QERSPERTPNMTKKVESNTW----GESVPRTCDWRKAKNIISSVKNQGSCKC 150

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + A  ++  + IK  + V+ S  +L++C +  +GC+G F ++  +   + +GL SE
Sbjct: 151 CWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGNGCNGGFVWDAYLTVLNNSGLASE 210

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIH 883
           KDYP++  + +  +C   K K K+   +DF    N  + +   L  +GP++V +N  L+ 
Sbjct: 211 KDYPFQ-GDRKPHRCLAKKYK-KVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQ 268

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-----------------DNIPYWLVRNSW 926
            Y    I+    +C P  + H+VLLVG+GK+                  + PYW+++NSW
Sbjct: 269 HYQKGVIKATPSSCDPRQVDHSVLLVGFGKEKEGMQTGTVLSHSRKRRHSSPYWILKNSW 328

Query: 927 GPIGPDEGFFKIERGNNACGIEQIAGYATID--VVKNDETCSP 967
           G    ++G+F++ RGNN CG+ +    A +D  V K   +C P
Sbjct: 329 GAHWGEKGYFRLYRGNNTCGVTKYPFTAQVDSPVKKARTSCPP 371



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 37/336 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y N  E   R   F     Q    + E  GT+EF     SD + EE 
Sbjct: 38  EVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEF 97

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G    ER+ ER     +KVE           VP   DWRK KN+     +Q +C  
Sbjct: 98  GQLYG---QERSPERTPNMTKKVESNTW----GESVPRTCDWRKAKNIISSVKNQGSCKC 150

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + A  ++  + IK  + V+ S  +L++C +  +GC G    +  +   + +GL SE
Sbjct: 151 CWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGNGCNGGFVWDAYLTVLNNSGLASE 210

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           KDYP++ G+ +  +C   K K K+   +DF +  N  + +   L  +GP++V +N  L+ 
Sbjct: 211 KDYPFQ-GDRKPHRCLAKKYK-KVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQ 268

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-----------------IPYWLARNSW 561
            Y    I+    +C P  + H+VLLVG+GK+ +                  PYW+ +NSW
Sbjct: 269 HYQKGVIKATPSSCDPRQVDHSVLLVGFGKEKEGMQTGTVLSHSRKRRHSSPYWILKNSW 328

Query: 562 GPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQR 597
           G    ++G+F++ RGNN CG+ +    A +D  +++
Sbjct: 329 GAHWGEKGYFRLYRGNNTCGVTKYPFTAQVDSPVKK 364



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 128/241 (53%), Gaps = 22/241 (9%)

Query: 11  VPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           VP   DWRK KN+     +Q  C  CWA + A  ++  + IK  + V+ S  +L++C + 
Sbjct: 126 VPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCERC 185

Query: 70  CSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-N 127
            +GC+G F ++  +   + +GL SEKDYP++  + +  +C   K K K+   +DF    N
Sbjct: 186 GNGCNGGFVWDAYLTVLNNSGLASEKDYPFQ-GDRKPHRCLAKKYK-KVAWIQDFTMLSN 243

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ---- 183
             + +   L  +GP++V +N  L+  Y    I+    +C P  + H+VLLVG+GK+    
Sbjct: 244 NEQAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKEKEGM 303

Query: 184 -------------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQ 230
                         + PYW+++NSWG    ++G+F++ RGNN CG+ +    A +D  ++
Sbjct: 304 QTGTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRGNNTCGVTKYPFTAQVDSPVK 363

Query: 231 R 231
           +
Sbjct: 364 K 364


>gi|403258371|ref|XP_003921746.1| PREDICTED: pro-cathepsin H [Saimiri boliviensis boliviensis]
          Length = 336

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 154/318 (48%), Gaps = 43/318 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+ +EE   R + F  +  K +         +   ++F+D S  EI  K
Sbjct: 35  FKSWMAKHHKTYSREEEYHHRLQTFASNWRKINAHNNGNHTFKMAVNQFADMSFAEI--K 92

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 93  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 144

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 145 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 204

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVLLNSDLIH 883
            YPY+   G+   C +   K   F  KD  +      + M + +  Y P+S     ++  
Sbjct: 205 TYPYQ---GKDSDCKFQPGKAIGFV-KDVANITIYDEDAMVEAVALYNPVSFAF--EVTQ 258

Query: 884 D--------YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
           D        Y+ T   K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+
Sbjct: 259 DFMMYKRGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGY 313

Query: 936 FKIERGNNACGIEQIAGY 953
           F IERG N CG+   A Y
Sbjct: 314 FLIERGKNMCGLAACASY 331



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 153/316 (48%), Gaps = 38/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+ +EE   R + F  +  K +         +   ++F+D S  EI  K
Sbjct: 35  FKSWMAKHHKTYSREEEYHHRLQTFASNWRKINAHNNGNHTFKMAVNQFADMSFAEI--K 92

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 93  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 144

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 145 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 204

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGL---NSH 515
            YPY+   G+   C +   K   F  KD   +     + M + +  Y P+S         
Sbjct: 205 TYPYQ---GKDSDCKFQPGKAIGFV-KDVANITIYDEDAMVEAVALYNPVSFAFEVTQDF 260

Query: 516 LIH---FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +++    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 261 MMYKRGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 315

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 316 IERGKNMCGLAACASY 331



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 117/228 (51%), Gaps = 25/228 (10%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 115 GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 174

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+   G+   C +   K   F  KD  
Sbjct: 175 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQ---GKDSDCKFQPGKAIGFV-KDVA 230

Query: 125 HFN--GSETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHA 174
           +      + M + +  Y P+S     ++  D        Y+ T   K     +P  + HA
Sbjct: 231 NITIYDEDAMVEAVALYNPVSFAF--EVTQDFMMYKRGIYSSTSCHK-----TPDKVNHA 283

Query: 175 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           VL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 284 VLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 331



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 276  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 331


>gi|118150|sp|P25804.1|CYSP_PEA RecName: Full=Cysteine proteinase 15A; AltName:
           Full=Turgor-responsive protein 15A; Flags: Precursor
 gi|20679|emb|CAA38242.1| unnamed protein product [Pisum sativum]
          Length = 363

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 159/338 (47%), Gaps = 57/338 (16%)

Query: 650 DNE-----NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTS 696
           DNE     N    F +F  K  + YA  EE   RF  FK +    K H+       +G +
Sbjct: 35  DNEEDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGIT 94

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRK 750
           +FSD +  E             + R     +K  ++    +K  P+      P+ +DWR+
Sbjct: 95  KFSDLTASE-------------FRRQFLGLKKRLRLPAHAQK-APILPTTNLPEDFDWRE 140

Query: 751 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--------- 801
           K    P  DQ +CGSCWAFS  G LEG + + TGKLV  S+ QLV+C   C         
Sbjct: 141 KGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCD 200

Query: 802 SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
           SGC+G     + EY  ++ G+  EKDY Y   +G    C +DKSKV        +     
Sbjct: 201 SGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGS---CKFDKSKVVASVSNFSVVTLDE 257

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYGK------ 913
           + +   L K GPL+V +N+  +  Y +G         C+   L H VLLVG+GK      
Sbjct: 258 DQIAANLVKNGPLAVAINAAWMQTYMSGVSC---PYVCAKSRLDHGVLLVGFGKGAYAPI 314

Query: 914 -QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
                PYW+++NSWG    ++G++KI RG N CG++ +
Sbjct: 315 RLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSM 352



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 159/338 (47%), Gaps = 56/338 (16%)

Query: 284 DNE-----NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTS 330
           DNE     N    F +F  K  + YA  EE   RF  FK +    K H+       +G +
Sbjct: 35  DNEEDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGIT 94

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRK 384
           +FSD +  E             + R     +K  ++    +K  P+      P+ +DWR+
Sbjct: 95  KFSDLTASE-------------FRRQFLGLKKRLRLPAHAQK-APILPTTNLPEDFDWRE 140

Query: 385 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGC 438
           K    P  DQ +CGSCWAFS  G LEG + + TGKLV  S+ QLV+C   C      S  
Sbjct: 141 KGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCD 200

Query: 439 GGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
            GC+G  +    EY  ++ G+  EKDY Y   +G    C +DKSKV        +     
Sbjct: 201 SGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGS---CKFDKSKVVASVSNFSVVTLDE 257

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFY-NGTPIRKNDETCSPYDLGHAVLLVGYGK------ 548
           + +   L K GPL+V +N+  +  Y +G         C+   L H VLLVG+GK      
Sbjct: 258 DQIAANLVKNGPLAVAINAAWMQTYMSGVSC---PYVCAKSRLDHGVLLVGFGKGAYAPI 314

Query: 549 -QDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
              + PYW+ +NSWG    ++G++KI RG N CG++ +
Sbjct: 315 RLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSM 352



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 119/227 (52%), Gaps = 24/227 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K    P  DQ  CGSCWAFS  G LEG + + TGKLV  S+ QLV+C   C
Sbjct: 132 LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVC 191

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  ++ G+  EKDY Y   +G    C +DKSKV     
Sbjct: 192 DPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGS---CKFDKSKVVASVS 248

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVG 179
              +     + +   L K GPL+V +N+  +  Y +G         C+   L H VLLVG
Sbjct: 249 NFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSC---PYVCAKSRLDHGVLLVG 305

Query: 180 YGK-------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           +GK           PYW+++NSWG    ++G++KI RG N CG++ +
Sbjct: 306 FGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSM 352



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 7/62 (11%)

Query: 964  TCSPYDLGHAVLLVGYGK-------QDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
             C+   L H VLLVG+GK         + PYW+++NSWG    ++G++KI RG N CG++
Sbjct: 291  VCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVD 350

Query: 1017 QI 1018
             +
Sbjct: 351  SM 352


>gi|33242870|gb|AAQ01139.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 167/338 (49%), Gaps = 22/338 (6%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 327
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 381
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCG 439
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GCG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 440 GCDGLEQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSET 497
           G   ++Q  +Y T   GL++E+ YPY   + E   C +D S V     G   +       
Sbjct: 180 G-GLMDQAFQYITANGGLDTEESYPYTATDDE--PCKFDNSSVGATLVGYKDVKSGNEHA 236

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD---IPY 554
           +K+ +   GP+SV +++    F   +    ++  CS   L H VL VGYG  +D     +
Sbjct: 237 LKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAF 296

Query: 555 WLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           W+ +NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 297 WIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 165/337 (48%), Gaps = 21/337 (6%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 693
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 747
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCD 805
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GC 
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 806 GCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETM 863
           G   + + +Y T   GL++E+ YPY   + E   C +D S V     G   +       +
Sbjct: 180 GGLMDQAFQYITANGGLDTEESYPYTATDDE--PCKFDNSSVGATLVGYKDVKSGNEHAL 237

Query: 864 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---IPYW 920
           K+ +   GP+SV +++        +    ++  CS   L H VL VGYG  ++     +W
Sbjct: 238 KRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFW 297

Query: 921 LVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 298 IVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 10/228 (4%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           + +G +P + DWR  ++     DQ +CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+
Sbjct: 109 DDNGTLPKSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVD 168

Query: 66  CAKQC--SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK 121
           C+K     GC G   + + +Y T   GL++E+ YPY   + E   C +D S V     G 
Sbjct: 169 CSKDFGNQGCGGGLMDQAFQYITANGGLDTEESYPYTATDDE--PCKFDNSSVGATLVGY 226

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
             +       +K+ +   GP+SV +++        +    ++  CS   L H VL VGYG
Sbjct: 227 KDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYG 286

Query: 182 KQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 287 AMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|426248750|ref|XP_004018122.1| PREDICTED: pro-cathepsin H [Ovis aries]
          Length = 355

 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 160/314 (50%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHE-RYGTSEFSDRSPEEILCK 709
           F++++V+  ++Y++ EE   R + F  +         + H  + G ++FSD S  E+  K
Sbjct: 55  FQSWMVQHQKKYSS-EEYHHRLQVFASNLREINAHNARNHTFKMGLNQFSDMSFAEL--K 111

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWR+K N   P  +Q +CGSCW 
Sbjct: 112 RKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWREKGNFVTPVKNQGSCGSCWT 163

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGKL   ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 164 FSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 223

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G+   C Y  SK   F  KD   +  N  E M + +  Y P+S    + +D 
Sbjct: 224 TYPYRGEDGD---CKYQPSKAIAFV-KDVANITLNDEEAMVEAVALYNPVSFAFEVTADF 279

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG++  IPYW+V+NSWGP    +G+F IE
Sbjct: 280 MMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPHWGMKGYFLIE 336

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A +
Sbjct: 337 RGKNMCGLAACASF 350



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 158/314 (50%), Gaps = 35/314 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHE-RYGTSEFSDRSPEEILCK 343
           F++++V+  ++Y++ EE   R + F  +         + H  + G ++FSD S  E+  K
Sbjct: 55  FQSWMVQHQKKYSS-EEYHHRLQVFASNLREINAHNARNHTFKMGLNQFSDMSFAEL--K 111

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWR+K N   P  +Q +CGSCW 
Sbjct: 112 RKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWREKGNFVTPVKNQGSCGSCWT 163

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGKL   ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 164 FSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 223

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVG--LNSHL 516
            YPYR   GE   C Y  SK   F  KD   +  N  E M + +  Y P+S    + +  
Sbjct: 224 TYPYR---GEDGDCKYQPSKAIAFV-KDVANITLNDEEAMVEAVALYNPVSFAFEVTADF 279

Query: 517 IHFYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
           + +  G     +  +C  +P  + HAVL VGYG++  IPYW+ +NSWGP    +G+F IE
Sbjct: 280 MMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPHWGMKGYFLIE 336

Query: 575 RGNNACGIEQIAGY 588
           RG N CG+   A +
Sbjct: 337 RGKNMCGLAACASF 350



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 120/224 (53%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWR+K N   P  +Q  CGSCW FS  G LE   AI TGKL   ++ QLV+CA
Sbjct: 134 GPYPPSMDWREKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCA 193

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPY+  +G+   C Y  SK   F  KD  
Sbjct: 194 QNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGEDGD---CKYQPSKAIAFV-KDVA 249

Query: 124 -LHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
            +  N  E M + +  Y P+S    + +D +    G     +  +C  +P  + HAVL V
Sbjct: 250 NITLNDEEAMVEAVALYNPVSFAFEVTADFMMYRKGI---YSSTSCHKTPDKVNHAVLAV 306

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG++  IPYW+V+NSWGP    +G+F IERG N CG+   A +
Sbjct: 307 GYGEEKGIPYWIVKNSWGPHWGMKGYFLIERGKNMCGLAACASF 350



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG++  IPYW+V+NSWGP    +G+F IERG N CG+   A +
Sbjct: 295  TPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPHWGMKGYFLIERGKNMCGLAACASF 350


>gi|393717160|gb|AFN21082.1| V-Cath [Bombyx mori NPV]
 gi|393717442|gb|AFN21362.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 28/337 (8%)

Query: 632 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 685
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 686 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 804 CDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--NGS 860
           C+G     + E      G++ E DYPY+  N     C  + +K  L   KD   +     
Sbjct: 174 CNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYIIVYE 229

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++NIPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 956
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 165/337 (48%), Gaps = 27/337 (8%)

Query: 266 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 319
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 320 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 438 CGGCDGLEQPIE-YTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG-S 495
           C G   L    E      G++ E DYPY   N     C  + +K  +     + Y     
Sbjct: 174 CNG-GLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKFLVQVKDCYRYIIVYE 229

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           E +K +L   GP+ + +++  I  Y    I+     C    L HAVLLVGYG +++IPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 591
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 120/221 (54%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C  
Sbjct: 110 GKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G     + E      G++ E DYPY+  N     C  + +K  L   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYI 225

Query: 127 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 282 IPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IPYW  +N+WG    ++GFF++++  NACG+  ++A  A 
Sbjct: 262  CFDSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAV 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|2582055|gb|AAB82455.1| lymphopain [Mus musculus]
          Length = 371

 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 166/343 (48%), Gaps = 40/343 (11%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y N  E   R   F     Q    + E  GT+EF     SD + EE 
Sbjct: 38  EVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEF 97

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G    ER+ ER     +KVE           VP   DWRK KN+     +Q +C  
Sbjct: 98  GQLYG---QERSPERTPNMTKKVESNTW----GESVPRTCDWRKAKNIISSVKNQGSCKC 150

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + A  ++  + IK  + V+ S  +L++C +  +GC+G F ++  +   + +GL SE
Sbjct: 151 CWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGNGCNGGFVWDAYLTVLNNSGLASE 210

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIH 883
           KDYP++  + +  +C   K K K+   +DF    N  + +   L  +GP++V +N  L+ 
Sbjct: 211 KDYPFQ-GDRKPHRCLAKKYK-KVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQ 268

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGK-----------------QDNIPYWLVRNSW 926
            Y    I+    +C P  + H+VLLVG+GK                 + + PYW+++NSW
Sbjct: 269 HYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSW 328

Query: 927 GPIGPDEGFFKIERGNNACGIEQIAGYATID--VVKNDETCSP 967
           G    ++G+F++ RGNN CG+ +    A +D  V K   +C P
Sbjct: 329 GAHWGEKGYFRLYRGNNTCGVTKYPFTAQVDSPVKKARTSCPP 371



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 37/336 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y N  E   R   F     Q    + E  GT+EF     SD + EE 
Sbjct: 38  EVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEF 97

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G    ER+ ER     +KVE           VP   DWRK KN+     +Q +C  
Sbjct: 98  GQLYG---QERSPERTPNMTKKVESNTW----GESVPRTCDWRKAKNIISSVKNQGSCKC 150

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + A  ++  + IK  + V+ S  +L++C +  +GC G    +  +   + +GL SE
Sbjct: 151 CWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGNGCNGGFVWDAYLTVLNNSGLASE 210

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           KDYP++ G+ +  +C   K K K+   +DF +  N  + +   L  +GP++V +N  L+ 
Sbjct: 211 KDYPFQ-GDRKPHRCLAKKYK-KVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQ 268

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-----------------IPYWLARNSW 561
            Y    I+    +C P  + H+VLLVG+GK+ +                  PYW+ +NSW
Sbjct: 269 HYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSW 328

Query: 562 GPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQR 597
           G    ++G+F++ RGNN CG+ +    A +D  +++
Sbjct: 329 GAHWGEKGYFRLYRGNNTCGVTKYPFTAQVDSPVKK 364



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 128/241 (53%), Gaps = 22/241 (9%)

Query: 11  VPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           VP   DWRK KN+     +Q  C  CWA + A  ++  + IK  + V+ S  +L++C + 
Sbjct: 126 VPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCERC 185

Query: 70  CSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-N 127
            +GC+G F ++  +   + +GL SEKDYP++  + +  +C   K K K+   +DF    N
Sbjct: 186 GNGCNGGFVWDAYLTVLNNSGLASEKDYPFQ-GDRKPHRCLAKKYK-KVAWIQDFTMLSN 243

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK----- 182
             + +   L  +GP++V +N  L+  Y    I+    +C P  + H+VLLVG+GK     
Sbjct: 244 NEQAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGM 303

Query: 183 ------------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQ 230
                       + + PYW+++NSWG    ++G+F++ RGNN CG+ +    A +D  ++
Sbjct: 304 QTGTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRGNNTCGVTKYPFTAQVDSPVK 363

Query: 231 R 231
           +
Sbjct: 364 K 364


>gi|393660044|gb|AFN09033.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 28/337 (8%)

Query: 632 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 685
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 686 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 804 CDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--NGS 860
           C+G     + E      G++ E DYPY+  N     C  + +K  L   KD   +     
Sbjct: 174 CNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYIIVYE 229

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++NIPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 956
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 165/337 (48%), Gaps = 27/337 (8%)

Query: 266 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 319
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 320 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 438 CGGCDGLEQPIE-YTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGS 495
           C G   L    E      G++ E DYPY   N     C  + +K  +     + Y     
Sbjct: 174 CNG-GLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKFLVQVKDCYRYIIVYE 229

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           E +K +L   GP+ + +++  I  Y    I+     C    L HAVLLVGYG +++IPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 591
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 120/221 (54%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C  
Sbjct: 110 GKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G     + E      G++ E DYPY+  N     C  + +K  L   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYI 225

Query: 127 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 282 IPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IPYW  +N+WG    ++GFF++++  NACG+  ++A  A 
Sbjct: 262  CFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAV 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|296213765|ref|XP_002753411.1| PREDICTED: pro-cathepsin H [Callithrix jacchus]
          Length = 336

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 155/318 (48%), Gaps = 43/318 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+ +EE  +R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMAKHHKTYSREEEYHQRLQTFASNWRKINAHNNGNHTFKMAVNQFSDMSFAEI--K 92

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK +   P  +Q ACGSCW 
Sbjct: 93  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGHFVSPVKNQGACGSCWT 144

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 145 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNNGIMGED 204

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVLLNSDLIH 883
            YPY+   G+   C +   K   F  KD  +      + M + +  Y P+S     ++  
Sbjct: 205 TYPYQ---GKDSDCKFQPGKAIGFV-KDVANITIYDEDAMVEAVALYNPVSFAF--EVTQ 258

Query: 884 D--------YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
           D        Y+ T   K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+
Sbjct: 259 DFMMYKRGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGY 313

Query: 936 FKIERGNNACGIEQIAGY 953
           F IERG N CG+   A Y
Sbjct: 314 FLIERGKNMCGLAACASY 331



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 154/316 (48%), Gaps = 38/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+ +EE  +R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMAKHHKTYSREEEYHQRLQTFASNWRKINAHNNGNHTFKMAVNQFSDMSFAEI--K 92

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK +   P  +Q ACGSCW 
Sbjct: 93  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGHFVSPVKNQGACGSCWT 144

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 145 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNNGIMGED 204

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGL---NSH 515
            YPY+   G+   C +   K   F  KD   +     + M + +  Y P+S         
Sbjct: 205 TYPYQ---GKDSDCKFQPGKAIGFV-KDVANITIYDEDAMVEAVALYNPVSFAFEVTQDF 260

Query: 516 LIH---FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +++    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 261 MMYKRGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 315

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 316 IERGKNMCGLAACASY 331



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 117/228 (51%), Gaps = 25/228 (10%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK +   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 115 GPYPPSVDWRKKGHFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 174

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+   G+   C +   K   F  KD  
Sbjct: 175 QDFNNHGCQGGLPSQAFEYILYNNGIMGEDTYPYQ---GKDSDCKFQPGKAIGFV-KDVA 230

Query: 125 HFN--GSETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHA 174
           +      + M + +  Y P+S     ++  D        Y+ T   K     +P  + HA
Sbjct: 231 NITIYDEDAMVEAVALYNPVSFAF--EVTQDFMMYKRGIYSSTSCHK-----TPDKVNHA 283

Query: 175 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           VL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 284 VLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 331



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 276  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 331


>gi|290980288|ref|XP_002672864.1| predicted protein [Naegleria gruberi]
 gi|284086444|gb|EFC40120.1| predicted protein [Naegleria gruberi]
          Length = 356

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 37/330 (11%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-KHERY-------GTSEFSDRSPEEIL 707
           + F  F  K  + Y   +    R++ FKQ+  + + E Y       G + FSD +P+E  
Sbjct: 35  QLFTQFRRKHVKLYGTKQVQDRRYQIFKQNVERARFENYLTERDNMGVTRFSDLTPDEF- 93

Query: 708 CKTGFKWSERT----YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
            K+ F     T     E +   R+      + +++    P  +DWR+ N   P  DQ  C
Sbjct: 94  -KSMFLMKSYTPKQARELLSGMRQYPANAKLTMKQVSDAPKEFDWREHNAVTPVKDQGNC 152

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC----------SGCDGCFFEPSI 813
           GSCW FS  G +EG YA KTGKL+  S+ QLV+C   C          +GC+G     S 
Sbjct: 153 GSCWTFSTTGNVEGMYAAKTGKLISLSEQQLVDCDHNCVVWEGEKTCNAGCNGGLMWSSF 212

Query: 814 EY-THQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILYKYG 871
           E+     GL +E+ YPY+  +    +C ++ S  V   +   F+  N  E M   L   G
Sbjct: 213 EHIIKTGGLVTEESYPYEAVDN---RCRFNVSNAVVKISNWTFVSSNEDE-MAAWLANNG 268

Query: 872 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI-----PYWLVRNSW 926
           P+++ +N+D +  Y    +  N   C P +L H VL+VGYG++         YW+V+NSW
Sbjct: 269 PIAIAINADYLQYYRKGIL--NPSRCDPEELNHGVLIVGYGEEKAANGKVEKYWIVKNSW 326

Query: 927 GPIGPDEGFFKIERGNNACGIEQIAGYATI 956
                ++G+ ++ RG   CG+  +   A I
Sbjct: 327 SASWGEKGYVRVLRGKGVCGLNAVPSSALI 356



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 34/329 (10%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-KHERY-------GTSEFSDRSPEEIL 341
           + F  F  K  + Y   +    R++ FKQ+  + + E Y       G + FSD +P+E  
Sbjct: 35  QLFTQFRRKHVKLYGTKQVQDRRYQIFKQNVERARFENYLTERDNMGVTRFSDLTPDEF- 93

Query: 342 CKTGFKWSERT----YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
            K+ F     T     E +   R+      + +++    P  +DWR+ N   P  DQ  C
Sbjct: 94  -KSMFLMKSYTPKQARELLSGMRQYPANAKLTMKQVSDAPKEFDWREHNAVTPVKDQGNC 152

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-------SGCGGCDGLEQPIEY 450
           GSCW FS  G +EG YA KTGKL+  S+ QLV+C   C       +   GC+G      +
Sbjct: 153 GSCWTFSTTGNVEGMYAAKTGKLISLSEQQLVDCDHNCVVWEGEKTCNAGCNGGLMWSSF 212

Query: 451 TH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGP 507
            H     GL +E+ YPY   +    +C ++ S   +         +  + M   L   GP
Sbjct: 213 EHIIKTGGLVTEESYPYEAVDN---RCRFNVSNAVVKISNWTFVSSNEDEMAAWLANNGP 269

Query: 508 LSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI-----PYWLARNSWG 562
           +++ +N+  + +Y    +  N   C P +L H VL+VGYG++         YW+ +NSW 
Sbjct: 270 IAIAINADYLQYYRKGIL--NPSRCDPEELNHGVLIVGYGEEKAANGKVEKYWIVKNSWS 327

Query: 563 PIGPDEGFFKIERGNNACGIEQIAGYATI 591
               ++G+ ++ RG   CG+  +   A I
Sbjct: 328 ASWGEKGYVRVLRGKGVCGLNAVPSSALI 356



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 23/240 (9%)

Query: 3   MEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
           + +++    P  +DWR+ N   P  DQ +CGSCW FS  G +EG YA KTGKL+  S+ Q
Sbjct: 123 LTMKQVSDAPKEFDWREHNAVTPVKDQGNCGSCWTFSTTGNVEGMYAAKTGKLISLSEQQ 182

Query: 63  LVECAKQC----------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYD 111
           LV+C   C          +GC+G     S E+     GL +E+ YPY+  +    +C ++
Sbjct: 183 LVDCDHNCVVWEGEKTCNAGCNGGLMWSSFEHIIKTGGLVTEESYPYEAVDN---RCRFN 239

Query: 112 KSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD 170
            S  V   +   F+  N  E M   L   GP+++ +N+D +  Y    +  N   C P +
Sbjct: 240 VSNAVVKISNWTFVSSNEDE-MAAWLANNGPIAIAINADYLQYYRKGIL--NPSRCDPEE 296

Query: 171 LGHAVLLVGYGKQDNI-----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           L H VL+VGYG++         YW+V+NSW     ++G+ ++ RG   CG+  +   A I
Sbjct: 297 LNHGVLIVGYGEEKAANGKVEKYWIVKNSWSASWGEKGYVRVLRGKGVCGLNAVPSSALI 356


>gi|242044818|ref|XP_002460280.1| hypothetical protein SORBIDRAFT_02g025920 [Sorghum bicolor]
 gi|241923657|gb|EER96801.1| hypothetical protein SORBIDRAFT_02g025920 [Sorghum bicolor]
          Length = 363

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 161/340 (47%), Gaps = 27/340 (7%)

Query: 630 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 689
           +TD+  + +++  + G+L    + +   F  F V+ G+ Y +  E+++RF  F +     
Sbjct: 37  VTDRAASALES-TVFGALGRTRDAL--RFARFAVRYGKSYESAAEVQKRFRIFSESLQLV 93

Query: 690 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
                     R G + FSD S EE   +     + +     +A   ++    +       
Sbjct: 94  RSTNRKGLSYRLGINRFSDMSWEEF--RATRLGAAQNCSATLAGNHRMRAAAV------A 145

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +P   DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK +  S+ QLV+C K  
Sbjct: 146 LPKTKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGKPF 205

Query: 802 S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHF 857
           +  GC+G     + EY  +  GL++E+ YPYK  NG   FK   +   VK+    + +  
Sbjct: 206 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYKGVNGICDFKA--ENVGVKVLDSVN-ITL 262

Query: 858 NGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
              + +K  +    P+SV     +    Y       +    +P D+ HAVL VGYG ++ 
Sbjct: 263 GAEDELKDAVALVRPVSVAFQVVNGFRQYKSGVYTSDSCGNTPMDVNHAVLAVGYGVENG 322

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           +PYWL++NSWG    D+G+FK+E G N CG+   A Y  +
Sbjct: 323 VPYWLIKNSWGADWGDKGYFKMEMGKNMCGVATCASYPIV 362



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 163/345 (47%), Gaps = 36/345 (10%)

Query: 264 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 323
           +TD+  + +++  + G+L    + +   F  F V+ G+ Y +  E+++RF  F +     
Sbjct: 37  VTDRAASALES-TVFGALGRTRDAL--RFARFAVRYGKSYESAAEVQKRFRIFSESLQLV 93

Query: 324 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
                     R G + FSD S EE   +     + +     +A   ++    +       
Sbjct: 94  RSTNRKGLSYRLGINRFSDMSWEEF--RATRLGAAQNCSATLAGNHRMRAAAV------A 145

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P   DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK +  S+ QLV+C K  
Sbjct: 146 LPKTKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGKPF 205

Query: 436 SGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYF 492
           +  G   GL  Q  EY  +  GL++E+ YPY+  NG   FK   +   VK+    + +  
Sbjct: 206 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYKGVNGICDFKA--ENVGVKVLDSVN-ITL 262

Query: 493 NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKN----DETC--SPYDLGHAVLLVGY 546
              + +K  +    P+SV          NG    K+     ++C  +P D+ HAVL VGY
Sbjct: 263 GAEDELKDAVALVRPVSVAF-----QVVNGFRQYKSGVYTSDSCGNTPMDVNHAVLAVGY 317

Query: 547 GKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           G ++ +PYWL +NSWG    D+G+FK+E G N CG+   A Y  +
Sbjct: 318 GVENGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGVATCASYPIV 362



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 114/220 (51%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P   DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK +  S+ QLV+C K  
Sbjct: 146 LPKTKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGKPF 205

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHF 126
           +  GC+G     + EY  +  GL++E+ YPYK  NG   FK   +   VK+    + +  
Sbjct: 206 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYKGVNGICDFKA--ENVGVKVLDSVN-ITL 262

Query: 127 NGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              + +K  +    P+SV     +    Y       +    +P D+ HAVL VGYG ++ 
Sbjct: 263 GAEDELKDAVALVRPVSVAFQVVNGFRQYKSGVYTSDSCGNTPMDVNHAVLAVGYGVENG 322

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +PYWL++NSWG    D+G+FK+E G N CG+   A Y  +
Sbjct: 323 VPYWLIKNSWGADWGDKGYFKMEMGKNMCGVATCASYPIV 362



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V   ++C  +P D+ HAVL VGYG ++ +PYWL++NSWG    D+G+FK+E G N CG+ 
Sbjct: 295  VYTSDSCGNTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGVA 354

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 355  TCASYPIV 362


>gi|343477445|emb|CCD11724.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
          Length = 380

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 152/320 (47%), Gaps = 28/320 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC+G   + + ++   +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTNDFGCEGGLMDDAFKWIVSSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI---LYKYGPLSVLL 877
           + +E+ YPY +  G    C  DKS  K+   K   H +  E    I   L K GP+++ +
Sbjct: 208 VFTEQSYPYASGGGNVPAC--DKSG-KVVGAKIRDHVDLPEDENAIAEWLAKNGPVAIAV 264

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           ++     Y G  +     +C    L H VLLVGY      PYW+++NSW     +EG+ +
Sbjct: 265 DATSFQSYTGGVLT----SCISEHLDHGVLLVGYDDTSKPPYWIIKNSWSKGWGEEGYIR 320

Query: 938 IERGNNACGIEQIAGYATID 957
           IE+G N C ++ +   A + 
Sbjct: 321 IEKGTNQCLMKNLPSSAVVS 340



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 151/319 (47%), Gaps = 25/319 (7%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   D   + I  +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTNDFGCEGGLMDDAFKWIVSSNKGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN 513
           + +E+ YPY +G G    C  DKS KV     +D +     E  + + L K GP+++ ++
Sbjct: 208 VFTEQSYPYASGGGNVPAC--DKSGKVVGAKIRDHVDLPEDENAIAEWLAKNGPVAIAVD 265

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           +     Y G  +     +C    L H VLLVGY      PYW+ +NSW     +EG+ +I
Sbjct: 266 ATSFQSYTGGVLT----SCISEHLDHGVLLVGYDDTSKPPYWIIKNSWSKGWGEEGYIRI 321

Query: 574 ERGNNACGIEQIAGYATID 592
           E+G N C ++ +   A + 
Sbjct: 322 EKGTNQCLMKNLPSSAVVS 340



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 113/224 (50%), Gaps = 13/224 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P+A DWRKK    P  DQ  CGSCWAFS  G +EGQ+ +   +L   S+  LV C  
Sbjct: 124 GKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC+G   + + ++   +++  + +E+ YPY +  G    C  DKS  K+   K   H
Sbjct: 184 NDFGCEGGLMDDAFKWIVSSNKGNVFTEQSYPYASGGGNVPAC--DKSG-KVVGAKIRDH 240

Query: 126 FNGSETMKKI---LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            +  E    I   L K GP+++ +++     Y G  +     +C    L H VLLVGY  
Sbjct: 241 VDLPEDENAIAEWLAKNGPVAIAVDATSFQSYTGGVLT----SCISEHLDHGVLLVGYDD 296

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
               PYW+++NSW     +EG+ +IE+G N C ++ +   A + 
Sbjct: 297 TSKPPYWIIKNSWSKGWGEEGYIRIEKGTNQCLMKNLPSSAVVS 340


>gi|312306194|gb|ADQ73946.1| cathepsin L [Paralithodes camtschaticus]
          Length = 324

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 151/324 (46%), Gaps = 39/324 (12%)

Query: 289 LETFKAFIVKRGRQYANDEEIKERFEYFKQDGH---KKHERYGTSE---------FSDRS 336
             +F  F V+ GRQYA  +E + R   + Q+       +E+Y   E         F D +
Sbjct: 19  FTSFHQFKVQYGRQYATAQEERYRSSVYDQNMEFIEAHNEQYTNGEVTYMLAINQFGDMT 78

Query: 337 PEEI--LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            EEI  +       SE     ++  R            D  +P   DWR K    P  DQ
Sbjct: 79  NEEINAVMNGLLPASESRGVAVLGGR------------DDTLPAEVDWRTKGAVTPVKDQ 126

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH-- 452
            ACGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +  G  GC G      +T+  
Sbjct: 127 KACGSCWAFSATGSLEGQHFLKDGKLVSLSEQNLVDCSTK-QGDHGCGGGLMDFAFTYIK 185

Query: 453 -QAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSETMKKILYKYGPLSV 510
              G+++E  YPY   +G   KC Y+ +      TG   +  +  + ++K +   GP+SV
Sbjct: 186 DNGGIDTEASYPYEATDG---KCQYNPANSGATVTGYVDVEHDSEDALQKAVATIGPISV 242

Query: 511 GLNS--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +++     HFY+       D+ CS   L H VL VGYG QD   YWL +NSW     + 
Sbjct: 243 AIDASRSTFHFYHKGVYY--DKECSSTSLDHGVLAVGYGTQDGTDYWLVKNSWNITWGNH 300

Query: 569 GFFKIERG-NNACGIEQIAGYATI 591
           GF ++ R  NN CGI   A Y  +
Sbjct: 301 GFIEMSRNRNNNCGIATQASYPLV 324



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 151/323 (46%), Gaps = 38/323 (11%)

Query: 655 LETFKAFIVKRGRQYANDEEIKERFEYFKQDGH---KKHERYGTSE---------FSDRS 702
             +F  F V+ GRQYA  +E + R   + Q+       +E+Y   E         F D +
Sbjct: 19  FTSFHQFKVQYGRQYATAQEERYRSSVYDQNMEFIEAHNEQYTNGEVTYMLAINQFGDMT 78

Query: 703 PEEI--LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            EEI  +       SE     ++  R            D  +P   DWR K    P  DQ
Sbjct: 79  NEEINAVMNGLLPASESRGVAVLGGR------------DDTLPAEVDWRTKGAVTPVKDQ 126

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH- 817
            ACGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +    GC G   + +  Y   
Sbjct: 127 KACGSCWAFSATGSLEGQHFLKDGKLVSLSEQNLVDCSTKQGDHGCGGGLMDFAFTYIKD 186

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVL 876
             G+++E  YPY+  +G   KC Y+ +      TG   +  +  + ++K +   GP+SV 
Sbjct: 187 NGGIDTEASYPYEATDG---KCQYNPANSGATVTGYVDVEHDSEDALQKAVATIGPISVA 243

Query: 877 LNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEG 934
           +++     H Y+       D+ CS   L H VL VGYG QD   YWLV+NSW     + G
Sbjct: 244 IDASRSTFHFYHKGVYY--DKECSSTSLDHGVLAVGYGTQDGTDYWLVKNSWNITWGNHG 301

Query: 935 FFKIERG-NNACGIEQIAGYATI 956
           F ++ R  NN CGI   A Y  +
Sbjct: 302 FIEMSRNRNNNCGIATQASYPLV 324



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 117/226 (51%), Gaps = 12/226 (5%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +D  +P   DWR K    P  DQ  CGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C
Sbjct: 104 RDDTLPAEVDWRTKGAVTPVKDQKACGSCWAFSATGSLEGQHFLKDGKLVSLSEQNLVDC 163

Query: 67  AKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKD 122
           + +    GC G   + +  Y     G+++E  YPY+  +G   KC Y+ +      TG  
Sbjct: 164 STKQGDHGCGGGLMDFAFTYIKDNGGIDTEASYPYEATDG---KCQYNPANSGATVTGYV 220

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
            +  +  + ++K +   GP+SV +++     H Y+       D+ CS   L H VL VGY
Sbjct: 221 DVEHDSEDALQKAVATIGPISVAIDASRSTFHFYHKGVYY--DKECSSTSLDHGVLAVGY 278

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           G QD   YWLV+NSW     + GF ++ R  NN CGI   A Y  +
Sbjct: 279 GTQDGTDYWLVKNSWNITWGNHGFIEMSRNRNNNCGIATQASYPLV 324



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            D+ CS   L H VL VGYG QD   YWLV+NSW     + GF ++ R  NN CGI   A 
Sbjct: 261  DKECSSTSLDHGVLAVGYGTQDGTDYWLVKNSWNITWGNHGFIEMSRNRNNNCGIATQAS 320

Query: 1021 YATI 1024
            Y  +
Sbjct: 321  YPLV 324


>gi|37651368|ref|NP_932731.1| cathepsin [Choristoneura fumiferana DEF MNPV]
 gi|82024252|sp|Q6VTL7.1|CATV_NPVCD RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|37499277|gb|AAQ91676.1| cathepsin [Choristoneura fumiferana DEF MNPV]
          Length = 324

 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 160/304 (52%), Gaps = 28/304 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEILCK 709
           F+ F+    + Y++  E   RF+ F+ +  +           +Y  ++FSD S +E + K
Sbjct: 28  FEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISK 87

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCW 767
            TG           + ++   E +++    D GP+   +DWR+ N      +Q  CG+CW
Sbjct: 88  YTGLSLP-------LQNQNFCEVVVLNRPPDKGPLE--FDWRRLNKVTSVKNQGTCGACW 138

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKD 826
           AF+  G LE Q+AIK  +L+  S+ QL++C     GCDG     + E   +  G+++E D
Sbjct: 139 AFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDMGCDGGLLHTAYEAVMNMGGIQAEND 198

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           YPY+  NG+   C  + +K  +   K + +     E +K +L   GPL V +++  I +Y
Sbjct: 199 YPYEANNGD---CRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVNY 255

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
               IR     C+ + L HAVLLVGY  ++ +P+W+++N+WG    ++G+F++++  NAC
Sbjct: 256 KRGVIR----YCANHGLNHAVLLVGYAVENGVPFWILKNTWGTDWGEQGYFRVQQNINAC 311

Query: 946 GIEQ 949
           GI+ 
Sbjct: 312 GIQN 315



 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEILCK 343
           F+ F+    + Y++  E   RF+ F+ +  +           +Y  ++FSD S +E + K
Sbjct: 28  FEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISK 87

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCW 401
            TG           + ++   E +++    D GP+   +DWR+ N      +Q  CG+CW
Sbjct: 88  YTGLSLP-------LQNQNFCEVVVLNRPPDKGPLE--FDWRRLNKVTSVKNQGTCGACW 138

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKD 461
           AF+  G LE Q+AIK  +L+  S+ QL++C     GC G           +  G+++E D
Sbjct: 139 AFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDMGCDGGLLHTAYEAVMNMGGIQAEND 198

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGSETMKKILYKYGPLSVGLNSHLIHFY 520
           YPY   NG+   C  + +K  +   K + Y     E +K +L   GPL V +++  I  Y
Sbjct: 199 YPYEANNGD---CRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVNY 255

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
               IR     C+ + L HAVLLVGY  ++ +P+W+ +N+WG    ++G+F++++  NAC
Sbjct: 256 KRGVIR----YCANHGLNHAVLLVGYAVENGVPFWILKNTWGTDWGEQGYFRVQQNINAC 311

Query: 581 GIEQ 584
           GI+ 
Sbjct: 312 GIQN 315



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 120/209 (57%), Gaps = 9/209 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ QL++C     
Sbjct: 114 PLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDM 173

Query: 72  GCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGS 129
           GCDG     + E   +  G+++E DYPY+  NG+   C  + +K  +   K + +     
Sbjct: 174 GCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGD---CRLNAAKFVVKVKKCYRYVLMFE 230

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           E +K +L   GPL V +++  I +Y    IR     C+ + L HAVLLVGY  ++ +P+W
Sbjct: 231 EKLKDLLRIVGPLPVAIDASDIVNYKRGVIR----YCANHGLNHAVLLVGYAVENGVPFW 286

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           +++N+WG    ++G+F++++  NACGI+ 
Sbjct: 287 ILKNTWGTDWGEQGYFRVQQNINACGIQN 315



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 40/53 (75%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 1017
            C+ + L HAVLLVGY  ++ +P+W+++N+WG    ++G+F++++  NACGI+ 
Sbjct: 263  CANHGLNHAVLLVGYAVENGVPFWILKNTWGTDWGEQGYFRVQQNINACGIQN 315


>gi|237643659|ref|YP_002884349.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus]
 gi|229358205|gb|ACQ57300.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus]
          Length = 323

 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 28/337 (8%)

Query: 632 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 685
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 686 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVIILDQPPGKGP 113

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 804 CDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--NGS 860
           C+G     + E      G++ E DYPY+  N     C  + +K  L   KD   +     
Sbjct: 174 CNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYIIVYE 229

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++NIPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 956
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 165/337 (48%), Gaps = 27/337 (8%)

Query: 266 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 319
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 320 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVIILDQPPGKGP 113

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 438 CGGCDGLEQPIE-YTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGS 495
           C G   L    E      G++ E DYPY   N     C  + +K  +     + Y     
Sbjct: 174 CNG-GLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKFLVQVKDCYRYIIVYE 229

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           E +K +L   GP+ + +++  I  Y    I+     C    L HAVLLVGYG +++IPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 591
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 120/221 (54%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C  
Sbjct: 110 GKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G     + E      G++ E DYPY+  N     C  + +K  L   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN---CRMNSNKF-LVQVKDCYRYI 225

Query: 127 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 282 IPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IPYW  +N+WG    ++GFF++++  NACG+  ++A  A 
Sbjct: 262  CFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAV 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|6649577|gb|AAF21462.1|U69121_1 cysteine proteinase PWCP2 [Paragonimus westermani]
          Length = 260

 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/272 (34%), Positives = 136/272 (50%), Gaps = 24/272 (8%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 4   ELYEQFKRXYGKVYANEDDQK-RFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEF 62

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
             K         Y     + ++V+++     K    P+  DWR K       +Q +CGSC
Sbjct: 63  AAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAKGAVTAVENQGSCGSC 111

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEK 460
           WAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC G       +E  H  GLES+ 
Sbjct: 112 WAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAADGCNGGWPASSYLEIMHMGGLESQD 171

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY 520
           DYPY    G K +C  +K ++              +     L ++GPLS  LN+  + +Y
Sbjct: 172 DYPYA---GVKEQCFMEKERLLAKIDDSIALXPSEDDNAAYLAEHGPLSTLLNAITLQYY 228

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI 552
               I  +   CSP DL HAVL VGY K+ D+
Sbjct: 229 QSGIIHPSYXXCSPVDLNHAVLTVGYDKEGDM 260



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/273 (36%), Positives = 143/273 (52%), Gaps = 27/273 (9%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 4   ELYEQFKRXYGKVYANEDDQK-RFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEF 62

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
             K         Y     + ++V+++     K    P+  DWR K       +Q +CGSC
Sbjct: 63  AAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAKGAVTAVENQGSCGSC 111

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS-IEYTHQAGLESEK 825
           WAFS AG +EGQ+ IKTG+LV  SK QLV+C +   GC+G +   S +E  H  GLES+ 
Sbjct: 112 WAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAADGCNGGWPASSYLEIMHMGGLESQD 171

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHD 884
           DYPY    G K +C  +K ++ L    D +    SE      L ++GPLS LLN+  +  
Sbjct: 172 DYPYA---GVKEQCFMEKERL-LAKIDDSIALXPSEDDNAAYLAEHGPLSTLLNAITLQY 227

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 917
           Y    I  +   CSP DL HAVL VGY K+ ++
Sbjct: 228 YQSGIIHPSYXXCSPVDLNHAVLTVGYDKEGDM 260



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 100/178 (56%), Gaps = 6/178 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P+  DWR K       +Q  CGSCWAFS AG +EGQ+ IKTG+LV  SK QLV+C +  
Sbjct: 87  APERIDWRAKGAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAA 146

Query: 71  SGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G +   S +E  H  GLES+ DYPY    G K +C  +K ++ L    D +    S
Sbjct: 147 DGCNGGWPASSYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERL-LAKIDDSIALXPS 202

Query: 130 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           E      L ++GPLS LLN+  +  Y    I  +   CSP DL HAVL VGY K+ ++
Sbjct: 203 EDDNAAYLAEHGPLSTLLNAITLQYYQSGIIHPSYXXCSPVDLNHAVLTVGYDKEGDM 260


>gi|410914437|ref|XP_003970694.1| PREDICTED: cathepsin O-like [Takifugu rubripes]
          Length = 328

 Score =  152 bits (384), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 34/306 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSDRSPEE 705
           F+ F  + GR Y  +    +R  +F Q+   +H             +YG ++FSD S  E
Sbjct: 32  FEWFRERFGRNYEVNSPQFDRRLFFFQESTTRHAYLNSFSAASQSAKYGINQFSDLSQRE 91

Query: 706 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
                     +  Y R  ADR          +K   +P  +DWR   +  P  +Q ACGS
Sbjct: 92  F---------QDLYLRASADRAPA----FSGQKAEGLPAKFDWRDHAIVAPVQNQQACGS 138

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA--GLES 823
           CWAFS+ G ++  +AI   +LVE S  Q+++C+ Q  GC+G     ++++  Q    L  
Sbjct: 139 CWAFSVVGAVQSVHAIGGSQLVELSVQQVLDCSFQNKGCNGGTPVAALKWLTQTRVKLVP 198

Query: 824 EKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           + +YPYK        F  ++    VK FT  DF      E M   L K+GPLSV++++  
Sbjct: 199 QSEYPYKAQTRMCHFFSGSHGGVGVKNFTALDF--SGQEEAMMGHLVKHGPLSVVVDALS 256

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
             DY G  I+ +   CS     HAVL+VGY    +IPYW+V+NSWG    D+G+  ++ G
Sbjct: 257 WQDYLGGIIQYH---CSSKRSNHAVLVVGYDTTGDIPYWIVQNSWGTTWGDKGYVYMKVG 313

Query: 942 NNACGI 947
           +N CGI
Sbjct: 314 SNICGI 319



 Score =  143 bits (360), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 99/306 (32%), Positives = 145/306 (47%), Gaps = 33/306 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSDRSPEE 339
           F+ F  + GR Y  +    +R  +F Q+   +H             +YG ++FSD S  E
Sbjct: 32  FEWFRERFGRNYEVNSPQFDRRLFFFQESTTRHAYLNSFSAASQSAKYGINQFSDLSQRE 91

Query: 340 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
                     +  Y R  ADR          +K   +P  +DWR   +  P  +Q ACGS
Sbjct: 92  F---------QDLYLRASADRAPA----FSGQKAEGLPAKFDWRDHAIVAPVQNQQACGS 138

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH-QAGLES 458
           CWAFS+ G ++  +AI   +LVE S  Q+++C+ Q  GC G   +      T  +  L  
Sbjct: 139 CWAFSVVGAVQSVHAIGGSQLVELSVQQVLDCSFQNKGCNGGTPVAALKWLTQTRVKLVP 198

Query: 459 EKDYPYRNGNG--EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL 516
           + +YPY+        F  ++    VK FT  DF      E M   L K+GPLSV +++  
Sbjct: 199 QSEYPYKAQTRMCHFFSGSHGGVGVKNFTALDF--SGQEEAMMGHLVKHGPLSVVVDALS 256

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y G  I+ +   CS     HAVL+VGY    DIPYW+ +NSWG    D+G+  ++ G
Sbjct: 257 WQDYLGGIIQYH---CSSKRSNHAVLVVGYDTTGDIPYWIVQNSWGTTWGDKGYVYMKVG 313

Query: 577 NNACGI 582
           +N CGI
Sbjct: 314 SNICGI 319



 Score =  137 bits (346), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 9/215 (4%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           +K   +P  +DWR   +  P  +Q  CGSCWAFS+ G ++  +AI   +LVE S  Q+++
Sbjct: 110 QKAEGLPAKFDWRDHAIVAPVQNQQACGSCWAFSVVGAVQSVHAIGGSQLVELSVQQVLD 169

Query: 66  CAKQCSGCDGCFFEPSIEYTHQA--GLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGK 121
           C+ Q  GC+G     ++++  Q    L  + +YPYK        F  ++    VK FT  
Sbjct: 170 CSFQNKGCNGGTPVAALKWLTQTRVKLVPQSEYPYKAQTRMCHFFSGSHGGVGVKNFTAL 229

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           DF      E M   L K+GPLSV++++    DY G  I+ +   CS     HAVL+VGY 
Sbjct: 230 DF--SGQEEAMMGHLVKHGPLSVVVDALSWQDYLGGIIQYH---CSSKRSNHAVLVVGYD 284

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
              +IPYW+V+NSWG    D+G+  ++ G+N CGI
Sbjct: 285 TTGDIPYWIVQNSWGTTWGDKGYVYMKVGSNICGI 319



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/51 (50%), Positives = 34/51 (66%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS     HAVL+VGY    DIPYW+V+NSWG    D+G+  ++ G+N CGI
Sbjct: 269  CSSKRSNHAVLVVGYDTTGDIPYWIVQNSWGTTWGDKGYVYMKVGSNICGI 319


>gi|393717301|gb|AFN21222.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 169/337 (50%), Gaps = 28/337 (8%)

Query: 632 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 685
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 686 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 804 CDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--NGS 860
           C+G     + E      G++ E DYPY+  N     C  + +K  L   KD   +     
Sbjct: 174 CNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYIIVYE 229

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N+PYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENNVPYW 285

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 956
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 165/337 (48%), Gaps = 27/337 (8%)

Query: 266 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 319
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 320 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 438 CGGCDGLEQPIE-YTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGS 495
           C G   L    E      G++ E DYPY   N     C  + +K  +     + Y     
Sbjct: 174 CNG-GLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKFLVQVKDCYRYIIVYE 229

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           E +K +L   GP+ + +++  I  Y    I+     C    L HAVLLVGYG ++++PYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENNVPYW 285

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 591
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 120/221 (54%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C  
Sbjct: 110 GKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G     + E      G++ E DYPY+  N     C  + +K  L   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYI 225

Query: 127 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           +PYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 282 VPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG ++++PYW  +N+WG    ++GFF++++  NACG+  ++A  A 
Sbjct: 262  CFDSGLNHAVLLVGYGVENNVPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAV 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|340370388|ref|XP_003383728.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 398

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 118/219 (53%), Gaps = 6/219 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD  DWR+K    P  DQ  CGSCWAFS  G LEGQ+ I TG LV  S+ QLV+C+ + 
Sbjct: 183 APDTVDWREKGAVTPIKDQGQCGSCWAFSAIGSLEGQHFINTGNLVSLSEQQLVDCSLKN 242

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNG 128
            GC+G     + +Y    AG ESE DYPY   NG    C YD SK V   TG   L    
Sbjct: 243 DGCNGGMLSTAFKYIESVAGEESETDYPYTAKNG---TCQYDPSKAVAKVTGYTALPSGD 299

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            +++   +   GP+SV +++        +     +++CS + L H VL+VGYG +D   Y
Sbjct: 300 EDSLNDAVTSKGPISVCIDASHKSFQLYSEGVYYEKSCSYFLLDHCVLVVGYGTEDTADY 359

Query: 189 WLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATID 226
           WLV+NSWG     +G+ ++ R   N CGI   A Y  ++
Sbjct: 360 WLVKNSWGTSWGMKGYIRMSRNRKNNCGIATNAAYPLVN 398



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 118/219 (53%), Gaps = 6/219 (2%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            PD  DWR+K    P  DQ  CGSCWAFS  G LEGQ+ I TG LV  S+ QLV+C+ + 
Sbjct: 183 APDTVDWREKGAVTPIKDQGQCGSCWAFSAIGSLEGQHFINTGNLVSLSEQQLVDCSLKN 242

Query: 802 SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNG 859
            GC+G     + +Y    AG ESE DYPY   NG    C YD SK V   TG   L    
Sbjct: 243 DGCNGGMLSTAFKYIESVAGEESETDYPYTAKNG---TCQYDPSKAVAKVTGYTALPSGD 299

Query: 860 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 919
            +++   +   GP+SV +++        +     +++CS + L H VL+VGYG +D   Y
Sbjct: 300 EDSLNDAVTSKGPISVCIDASHKSFQLYSEGVYYEKSCSYFLLDHCVLVVGYGTEDTADY 359

Query: 920 WLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATID 957
           WLV+NSWG     +G+ ++ R   N CGI   A Y  ++
Sbjct: 360 WLVKNSWGTSWGMKGYIRMSRNRKNNCGIATNAAYPLVN 398



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/220 (40%), Positives = 117/220 (53%), Gaps = 7/220 (3%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            PD  DWR+K    P  DQ  CGSCWAFS  G LEGQ+ I TG LV  S+ QLV+C+ + 
Sbjct: 183 APDTVDWREKGAVTPIKDQGQCGSCWAFSAIGSLEGQHFINTGNLVSLSEQQLVDCSLKN 242

Query: 436 SGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSK-VKLFTGKDFLYFN 493
            GC G   L    +Y    AG ESE DYPY   NG    C YD SK V   TG   L   
Sbjct: 243 DGCNG-GMLSTAFKYIESVAGEESETDYPYTAKNG---TCQYDPSKAVAKVTGYTALPSG 298

Query: 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIP 553
             +++   +   GP+SV +++    F   +     +++CS + L H VL+VGYG +D   
Sbjct: 299 DEDSLNDAVTSKGPISVCIDASHKSFQLYSEGVYYEKSCSYFLLDHCVLVVGYGTEDTAD 358

Query: 554 YWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATID 592
           YWL +NSWG     +G+ ++ R   N CGI   A Y  ++
Sbjct: 359 YWLVKNSWGTSWGMKGYIRMSRNRKNNCGIATNAAYPLVN 398



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           G VP++ DWRKK    P   Q  CG  W + I G +E QY IKTG LV  S  Q+++CA
Sbjct: 109 GNVPNSIDWRKKGAVTPVSSQGQCG-VWPWPIVGSVESQYFIKTGTLVPLSVQQILDCA 166



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           G VP++ DWRKK    P   Q  CG  W + I G +E QY IKTG LV  S  Q+++CA
Sbjct: 109 GNVPNSIDWRKKGAVTPVSSQGQCG-VWPWPIVGSVESQYFIKTGTLVPLSVQQILDCA 166



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           G VP++ DWRKK    P   Q  CG  W + I G +E QY IKTG LV  S  Q+++CA
Sbjct: 109 GNVPNSIDWRKKGAVTPVSSQGQCG-VWPWPIVGSVESQYFIKTGTLVPLSVQQILDCA 166



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAG 1020
            +++CS + L H VL+VGYG +D   YWLV+NSWG     +G+ ++ R   N CGI   A 
Sbjct: 334  EKSCSYFLLDHCVLVVGYGTEDTADYWLVKNSWGTSWGMKGYIRMSRNRKNNCGIATNAA 393

Query: 1021 YATID 1025
            Y  ++
Sbjct: 394  YPLVN 398


>gi|427778331|gb|JAA54617.1| Putative cysteine proteinase cathepsin f [Rhipicephalus pulchellus]
          Length = 361

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 178/371 (47%), Gaps = 53/371 (14%)

Query: 259 SLTDRITDQVVARVDTLA-IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK 317
           S+  RI+  +  +  T A +   L    E  L  F  F     + Y + EE + RF  FK
Sbjct: 2   SIVTRISGVLDPKDLTFAYLSKHLKLSQERSL--FSVFARTYNKTYKDKEEHEARFMIFK 59

Query: 318 QDGHK---------KHERYGTSEFSDRSPEEILCKTGFKWSERTY---ERIVADREKVEK 365
            +  +             YG +EFSD SP E          ER Y   ++ +A+ +   K
Sbjct: 60  NNLKRIALFNRLEEGTAHYGLTEFSDLSPSEF---------ERHYLGLKKDLAEHKAEVK 110

Query: 366 MLMEVEKDGPVPDAWDWRKKNVT------GPAG------------DQAACGSCWAFSIAG 407
            +     + P+PD +DWR K         G  G            +Q  CGSCWAFS+ G
Sbjct: 111 PIKVGPVNEPLPDLFDWRTKGAVTEVKNQGMCGSCWAFSXXTEVKNQGMCGSCWAFSVTG 170

Query: 408 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 467
            +EGQ+ +   KL+  S+ +LV+C     GC G    +         GLE+E +YPY+  
Sbjct: 171 NVEGQWFLSRSKLLSLSEQELVDCDHGDHGCKGGYMGQAMKAVIEMGGLETESEYPYKGV 230

Query: 468 NGE-KFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIR 526
           +G  +F     K++V+ F G   L  N +E +   L K+GP+S+G+N++ + FY G    
Sbjct: 231 DGTCEFNKTESKARVQSFVG---LPQNETE-LAYWLMKHGPVSIGINANAMQFYFGGISH 286

Query: 527 KNDETCSPYDLGHAVLLVGYG------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
                CSP DL H VLLVG+G      ++  +PYW+ +NSWG    ++G++++ RG+  C
Sbjct: 287 PWKFLCSPTDLDHGVLLVGFGVDKRSFRRKPVPYWIVKNSWGKYWGEKGYYRVYRGDGTC 346

Query: 581 GIEQIAGYATI 591
           G+ Q+A  A +
Sbjct: 347 GVNQMALSAVV 357



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 180/371 (48%), Gaps = 54/371 (14%)

Query: 625 SLTDRITDQVVARVDTLA-IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK 683
           S+  RI+  +  +  T A +   L    E  L  F  F     + Y + EE + RF  FK
Sbjct: 2   SIVTRISGVLDPKDLTFAYLSKHLKLSQERSL--FSVFARTYNKTYKDKEEHEARFMIFK 59

Query: 684 QDGHK---------KHERYGTSEFSDRSPEEILCKTGFKWSERTY---ERIVADREKVEK 731
            +  +             YG +EFSD SP E          ER Y   ++ +A+ +   K
Sbjct: 60  NNLKRIALFNRLEEGTAHYGLTEFSDLSPSEF---------ERHYLGLKKDLAEHKAEVK 110

Query: 732 MLMEVEKDGPVPDAWDWRKKNVT------GPAG------------DQAACGSCWAFSIAG 773
            +     + P+PD +DWR K         G  G            +Q  CGSCWAFS+ G
Sbjct: 111 PIKVGPVNEPLPDLFDWRTKGAVTEVKNQGMCGSCWAFSXXTEVKNQGMCGSCWAFSVTG 170

Query: 774 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNA 832
            +EGQ+ +   KL+  S+ +LV+C     GC G +   +++      GLE+E +YPYK  
Sbjct: 171 NVEGQWFLSRSKLLSLSEQELVDCDHGDHGCKGGYMGQAMKAVIEMGGLETESEYPYKGV 230

Query: 833 NGE-KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIR 891
           +G  +F     K++V+ F G   L  N +E +   L K+GP+S+ +N++ +  Y G    
Sbjct: 231 DGTCEFNKTESKARVQSFVG---LPQNETE-LAYWLMKHGPVSIGINANAMQFYFGGISH 286

Query: 892 KNDETCSPYDLGHAVLLVGYG------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                CSP DL H VLLVG+G      ++  +PYW+V+NSWG    ++G++++ RG+  C
Sbjct: 287 PWKFLCSPTDLDHGVLLVGFGVDKRSFRRKPVPYWIVKNSWGKYWGEKGYYRVYRGDGTC 346

Query: 946 GIEQIAGYATI 956
           G+ Q+A  A +
Sbjct: 347 GVNQMALSAVV 357



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 131/242 (54%), Gaps = 30/242 (12%)

Query: 10  PVPDAWDWRKKNVT------GPAG------------DQADCGSCWAFSIAGMLEGQYAIK 51
           P+PD +DWR K         G  G            +Q  CGSCWAFS+ G +EGQ+ + 
Sbjct: 120 PLPDLFDWRTKGAVTEVKNQGMCGSCWAFSXXTEVKNQGMCGSCWAFSVTGNVEGQWFLS 179

Query: 52  TGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGE-KFKCA 109
             KL+  S+ +LV+C     GC G +   +++      GLE+E +YPYK  +G  +F   
Sbjct: 180 RSKLLSLSEQELVDCDHGDHGCKGGYMGQAMKAVIEMGGLETESEYPYKGVDGTCEFNKT 239

Query: 110 YDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY 169
             K++V+ F G   L  N +E +   L K+GP+S+ +N++ +  Y G         CSP 
Sbjct: 240 ESKARVQSFVG---LPQNETE-LAYWLMKHGPVSIGINANAMQFYFGGISHPWKFLCSPT 295

Query: 170 DLGHAVLLVGYG------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 223
           DL H VLLVG+G      ++  +PYW+V+NSWG    ++G++++ RG+  CG+ Q+A  A
Sbjct: 296 DLDHGVLLVGFGVDKRSFRRKPVPYWIVKNSWGKYWGEKGYYRVYRGDGTCGVNQMALSA 355

Query: 224 TI 225
            +
Sbjct: 356 VV 357


>gi|444724527|gb|ELW65130.1| Cathepsin W [Tupaia chinensis]
          Length = 491

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 164/327 (50%), Gaps = 36/327 (11%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E F  F ++  R Y++  E   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 166 EVFALFQIQYNRSYSSPAEHARRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTDEEF 225

Query: 707 LCKTGFKWSERTYE--RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
                     + Y+  ++  +  ++ + +  +++  PVP   DWRK  +  P  +Q  C 
Sbjct: 226 ---------SQVYKQPKVPGEVPRMVRKVRSLKQGKPVPPTCDWRKARIISPIRNQKNCS 276

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLES 823
            CWA + A  +E Q+ I+  + V+ S  +L++C +   GC G + ++  I   + +GL S
Sbjct: 277 CCWAMAAADNIEAQWGIRYNQSVKVSVQELLDCGRCGDGCKGGWVWDAFITVLNNSGLAS 336

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EKDYPY+ +N +  +C   ++KV     +DF+    +E  + + L  +GP++V +N   +
Sbjct: 337 EKDYPYQ-SNVDPQRCRVKRNKVAWI--QDFIMLQDNEQIIAQYLASHGPITVTINMKPL 393

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI-----------PYWLVRNSWGPIGP 931
             Y          TC P+ + H+VLLVG+G   ++           PYW+++NSWG    
Sbjct: 394 KQYRKGVFEATPATCDPWLVDHSVLLVGFGSSKSVKGMRAGTASSKPYWILKNSWGAKWG 453

Query: 932 DEGFFKIERGNNACGIEQIAGYATIDV 958
           ++G+F++ RG+N CGI +    A +++
Sbjct: 454 EKGYFRLHRGSNTCGIAKYPLTARVEL 480



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 162/331 (48%), Gaps = 35/331 (10%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E F  F ++  R Y++  E   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 166 EVFALFQIQYNRSYSSPAEHARRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTDEEF 225

Query: 341 LCKTGFKWSERTYE--RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
                     + Y+  ++  +  ++ + +  +++  PVP   DWRK  +  P  +Q  C 
Sbjct: 226 ---------SQVYKQPKVPGEVPRMVRKVRSLKQGKPVPPTCDWRKARIISPIRNQKNCS 276

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
            CWA + A  +E Q+ I+  + V+ S  +L++C +   GC G    +  I   + +GL S
Sbjct: 277 CCWAMAAADNIEAQWGIRYNQSVKVSVQELLDCGRCGDGCKGGWVWDAFITVLNNSGLAS 336

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLI 517
           EKDYPY++ N +  +C   ++KV     +DF+    +E  + + L  +GP++V +N   +
Sbjct: 337 EKDYPYQS-NVDPQRCRVKRNKVAWI--QDFIMLQDNEQIIAQYLASHGPITVTINMKPL 393

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI-----------PYWLARNSWGPIGP 566
             Y          TC P+ + H+VLLVG+G    +           PYW+ +NSWG    
Sbjct: 394 KQYRKGVFEATPATCDPWLVDHSVLLVGFGSSKSVKGMRAGTASSKPYWILKNSWGAKWG 453

Query: 567 DEGFFKIERGNNACGIEQIAGYATIDVVIQR 597
           ++G+F++ RG+N CGI +    A +++  QR
Sbjct: 454 EKGYFRLHRGSNTCGIAKYPLTARVELPDQR 484



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 132/243 (54%), Gaps = 16/243 (6%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           +  +++  PVP   DWRK  +  P  +Q +C  CWA + A  +E Q+ I+  + V+ S  
Sbjct: 245 VRSLKQGKPVPPTCDWRKARIISPIRNQKNCSCCWAMAAADNIEAQWGIRYNQSVKVSVQ 304

Query: 62  QLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           +L++C +   GC G + ++  I   + +GL SEKDYPY+ +N +  +C   ++KV     
Sbjct: 305 ELLDCGRCGDGCKGGWVWDAFITVLNNSGLASEKDYPYQ-SNVDPQRCRVKRNKVAWI-- 361

Query: 121 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
           +DF+    +E  + + L  +GP++V +N   +  Y          TC P+ + H+VLLVG
Sbjct: 362 QDFIMLQDNEQIIAQYLASHGPITVTINMKPLKQYRKGVFEATPATCDPWLVDHSVLLVG 421

Query: 180 YGKQDNI-----------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVV 228
           +G   ++           PYW+++NSWG    ++G+F++ RG+N CGI +    A +++ 
Sbjct: 422 FGSSKSVKGMRAGTASSKPYWILKNSWGAKWGEKGYFRLHRGSNTCGIAKYPLTARVELP 481

Query: 229 IQR 231
            QR
Sbjct: 482 DQR 484



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 11/74 (14%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDI-----------PYWLVRNSWGPIGPDEGFFKIERGNNA 1012
            TC P+ + H+VLLVG+G    +           PYW+++NSWG    ++G+F++ RG+N 
Sbjct: 407  TCDPWLVDHSVLLVGFGSSKSVKGMRAGTASSKPYWILKNSWGAKWGEKGYFRLHRGSNT 466

Query: 1013 CGIEQIAGYATIDV 1026
            CGI +    A +++
Sbjct: 467  CGIAKYPLTARVEL 480


>gi|9630927|ref|NP_047524.1| Cystein Protease [Bombyx mori NPV]
 gi|1168798|sp|P41721.1|CATV_NPVBM RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|540066|gb|AAB49542.1| cysteine protease [Bombyx mori NPV]
 gi|3745946|gb|AAC63793.1| Cystein Protease [Bombyx mori NPV]
          Length = 323

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 28/337 (8%)

Query: 632 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 685
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 686 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 804 CDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--NGS 860
           C+G     + E      G++ E DYPY+  N     C  + +K  L   KD   +     
Sbjct: 174 CNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYIIVYE 229

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++NIPYW
Sbjct: 230 EKLKDLLPLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 956
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 165/337 (48%), Gaps = 27/337 (8%)

Query: 266 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 319
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 320 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAG 173

Query: 438 CGGCDGLEQPIE-YTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGS 495
           C G   L    E      G++ E DYPY   N     C  + +K  +     + Y     
Sbjct: 174 CNG-GLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKFLVQVKDCYRYIIVYE 229

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           E +K +L   GP+ + +++  I  Y    I+     C    L HAVLLVGYG +++IPYW
Sbjct: 230 EKLKDLLPLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 591
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 120/221 (54%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q+++C  
Sbjct: 110 GKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G     + E      G++ E DYPY+  N     C  + +K  L   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYI 225

Query: 127 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 226 IVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 282 IPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IPYW  +N+WG    ++GFF++++  NACG+  ++A  A 
Sbjct: 262  CFDSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAV 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|258618831|gb|ACV84238.1| cysteine proteinase L [Anisakis simplex]
          Length = 411

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 173/363 (47%), Gaps = 22/363 (6%)

Query: 600 LEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFK 659
           L  + +++     LL G ++ L + ++  +        V+ + +  +   ++   ++ F 
Sbjct: 47  LSLRKLVIAVLTLLLVGCSALLFVMTIY-QAEMHSSNPVEEILLRENYPREDFAYIDQFI 105

Query: 660 AFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEILCKTG 711
            F+   GR+Y    E +ERF+ F        K    K++ ++G + F+D S EE+   T 
Sbjct: 106 DFMNVYGRKYHGYHETRERFQNFVNNMKYIKKIQQGKQNVQFGITRFADWSEEEMKSMT- 164

Query: 712 FKWSERTYERIVADRE----KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
               E     +  DRE      E      +  G  P+++DWR KNV     DQ  CGSCW
Sbjct: 165 --CGEEPNMEMRYDREYYDGSYEDEFTLYDGFGGRPESFDWRSKNVVTDIKDQQRCGSCW 222

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDY 827
           AF   G++E   AI    LV  S+ QLV+C    +GCDG +   +++Y    G+  E+ Y
Sbjct: 223 AFGAVGVVESMNAIAKNPLVSLSEQQLVDCDMNDNGCDGGYRPYALQYIRHNGIVPEELY 282

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDY 885
           PY     +  K      +V + T K ++  N S     + YK GPLSV +N   DL H Y
Sbjct: 283 PYAGKELDSCKLNTTVQRVYVKTVK-YIRRNESAMADFVFYK-GPLSVGINVTKDLFH-Y 339

Query: 886 NGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
                  + E C     G HA+ +VGYG Q+   YW+++NSWG     +GFF  +RG N+
Sbjct: 340 QSGVFTPSKEDCEQNPQGTHALAVVGYGSQNGEDYWIIKNSWGKRWGMDGFFLYKRGANS 399

Query: 945 CGI 947
           CGI
Sbjct: 400 CGI 402



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 174/366 (47%), Gaps = 27/366 (7%)

Query: 234 LEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFK 293
           L  + +++     LL G ++ L + ++  +        V+ + +  +   ++   ++ F 
Sbjct: 47  LSLRKLVIAVLTLLLVGCSALLFVMTIY-QAEMHSSNPVEEILLRENYPREDFAYIDQFI 105

Query: 294 AFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEILCKTG 345
            F+   GR+Y    E +ERF+ F        K    K++ ++G + F+D S EE+   T 
Sbjct: 106 DFMNVYGRKYHGYHETRERFQNFVNNMKYIKKIQQGKQNVQFGITRFADWSEEEMKSMT- 164

Query: 346 FKWSERTYERIVADRE----KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
               E     +  DRE      E      +  G  P+++DWR KNV     DQ  CGSCW
Sbjct: 165 --CGEEPNMEMRYDREYYDGSYEDEFTLYDGFGGRPESFDWRSKNVVTDIKDQQRCGSCW 222

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQP--IEYTHQAGLESE 459
           AF   G++E   AI    LV  S+ QLV+C    +   GCDG  +P  ++Y    G+  E
Sbjct: 223 AFGAVGVVESMNAIAKNPLVSLSEQQLVDCDMNDN---GCDGGYRPYALQYIRHNGIVPE 279

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN--SHLI 517
           + YPY     +  K      +V + T K ++  N S     + YK GPLSVG+N    L 
Sbjct: 280 ELYPYAGKELDSCKLNTTVQRVYVKTVK-YIRRNESAMADFVFYK-GPLSVGINVTKDLF 337

Query: 518 HFYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
           H+ +G     + E C     G HA+ +VGYG Q+   YW+ +NSWG     +GFF  +RG
Sbjct: 338 HYQSGV-FTPSKEDCEQNPQGTHALAVVGYGSQNGEDYWIIKNSWGKRWGMDGFFLYKRG 396

Query: 577 NNACGI 582
            N+CGI
Sbjct: 397 ANSCGI 402



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 112/211 (53%), Gaps = 6/211 (2%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P+++DWR KNV     DQ  CGSCWAF   G++E   AI    LV  S+ QLV+C  
Sbjct: 195 GGRPESFDWRSKNVVTDIKDQQRCGSCWAFGAVGVVESMNAIAKNPLVSLSEQQLVDCDM 254

Query: 69  QCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
             +GCDG +   +++Y    G+  E+ YPY     +  K      +V + T K ++  N 
Sbjct: 255 NDNGCDGGYRPYALQYIRHNGIVPEELYPYAGKELDSCKLNTTVQRVYVKTVK-YIRRNE 313

Query: 129 SETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDN 185
           S     + YK GPLSV +N   DL H Y       + E C     G HA+ +VGYG Q+ 
Sbjct: 314 SAMADFVFYK-GPLSVGINVTKDLFH-YQSGVFTPSKEDCEQNPQGTHALAVVGYGSQNG 371

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
             YW+++NSWG     +GFF  +RG N+CGI
Sbjct: 372 EDYWIIKNSWGKRWGMDGFFLYKRGANSCGI 402



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 31/44 (70%)

Query: 972  HAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            HA+ +VGYG Q+   YW+++NSWG     +GFF  +RG N+CGI
Sbjct: 359  HALAVVGYGSQNGEDYWIIKNSWGKRWGMDGFFLYKRGANSCGI 402


>gi|38045864|gb|AAR08900.1| cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 123/228 (53%), Gaps = 15/228 (6%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
            D  VP++ DWR+        DQ DCGSCWAFS  G +EGQY       + FS+ QLV+C
Sbjct: 104 NDRAVPESIDWREFGYVTEVKDQGDCGSCWAFSATGAMEGQYMKNQKANISFSEQQLVDC 163

Query: 67  AKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDF 123
           +      GC G F E + EY ++ GLE+E  YPYK    E+  C YD +  V    G  F
Sbjct: 164 SGDYGNRGCSGGFMEHAYEYLYEVGLETESSYPYK---AEEGPCKYDSRLGVAKVNGFYF 220

Query: 124 LHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
            HF     +  ++   GP +V ++  SD +    G    +N   CS   L HA+L+VGYG
Sbjct: 221 DHFGVESKLAHLVGDKGPAAVAVDVESDFLMYRGGIYASRN---CSSEKLNHAMLVVGYG 277

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVV 228
            QD   YW+V+NSWG +  D G+ ++ R  +N CG   IA +A++ VV
Sbjct: 278 TQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCG---IASFASLPVV 322



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 139/274 (50%), Gaps = 25/274 (9%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKN 752
           G ++F+D + EE   K         Y R +     +    +  E  D  VP++ DWR+  
Sbjct: 68  GLNQFTDMTFEEFKAK---------YLREIPRASDIHSHGIPYEANDRAVPESIDWREFG 118

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFE 810
                 DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+      GC G F E
Sbjct: 119 YVTEVKDQGDCGSCWAFSATGAMEGQYMKNQKANISFSEQQLVDCSGDYGNRGCSGGFME 178

Query: 811 PSIEYTHQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSETMKKILYK 869
            + EY ++ GLE+E  YPYK    E+  C YD +  V    G  F HF     +  ++  
Sbjct: 179 HAYEYLYEVGLETESSYPYK---AEEGPCKYDSRLGVAKVNGFYFDHFGVESKLAHLVGD 235

Query: 870 YGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927
            GP +V ++  SD +    G    +N   CS   L HA+L+VGYG QD   YW+V+NSWG
Sbjct: 236 KGPAAVAVDVESDFLMYRGGIYASRN---CSSEKLNHAMLVVGYGTQDGTDYWIVKNSWG 292

Query: 928 PIGPDEGFFKIERG-NNACGIEQIAGYATIDVVK 960
            +  D G+ ++ R  +N CG   IA +A++ VV+
Sbjct: 293 SLWGDHGYIRMARNRDNMCG---IASFASLPVVE 323



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 137/274 (50%), Gaps = 26/274 (9%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKN 386
           G ++F+D + EE   K         Y R +     +    +  E  D  VP++ DWR+  
Sbjct: 68  GLNQFTDMTFEEFKAK---------YLREIPRASDIHSHGIPYEANDRAVPESIDWREFG 118

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--L 444
                 DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+    G  GC G  +
Sbjct: 119 YVTEVKDQGDCGSCWAFSATGAMEGQYMKNQKANISFSEQQLVDCSGD-YGNRGCSGGFM 177

Query: 445 EQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLYFNGSETMKKILY 503
           E   EY ++ GLE+E  YPY+    E+  C YD +  V    G  F +F     +  ++ 
Sbjct: 178 EHAYEYLYEVGLETESSYPYK---AEEGPCKYDSRLGVAKVNGFYFDHFGVESKLAHLVG 234

Query: 504 KYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
             GP +V ++  S  + +  G    +N   CS   L HA+L+VGYG QD   YW+ +NSW
Sbjct: 235 DKGPAAVAVDVESDFLMYRGGIYASRN---CSSEKLNHAMLVVGYGTQDGTDYWIVKNSW 291

Query: 562 GPIGPDEGFFKIERG-NNACGIEQIAGYATIDVV 594
           G +  D G+ ++ R  +N CG   IA +A++ VV
Sbjct: 292 GSLWGDHGYIRMARNRDNMCG---IASFASLPVV 322



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYA 1022
             CS   L HA+L+VGYG QD   YW+V+NSWG +  D G+ ++ R  +N CGI   A   
Sbjct: 261  NCSSEKLNHAMLVVGYGTQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCGIASFASLP 320

Query: 1023 TID 1025
             ++
Sbjct: 321  VVE 323


>gi|255543801|ref|XP_002512963.1| cysteine protease, putative [Ricinus communis]
 gi|223547974|gb|EEF49466.1| cysteine protease, putative [Ricinus communis]
          Length = 373

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 157/322 (48%), Gaps = 49/322 (15%)

Query: 669 YANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSERTYE 720
           YA+ EE   RF+ FK +  +  +H++      +G ++FSD +  E      F+       
Sbjct: 69  YASQEEHDYRFKIFKSNLRRAERHQKLDPTATHGVTQFSDLTHSE------FRRQFLGLR 122

Query: 721 RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYA 780
           R+   ++  E  ++       +P  +DWR+K       +Q +CGSCW+FS  G LEG   
Sbjct: 123 RLRLPKDANEAPMLPTND---LPADFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGANY 179

Query: 781 IKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYK 830
           + TGKLV  S+ QLV+C  +C         SGC+G     + EYT +A GL  E+DYPY 
Sbjct: 180 LATGKLVSLSEQQLVDCDHECDPAEEGACDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 239

Query: 831 NANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPI 890
               ++  C +DK+K+        +     + +   L K GPL+V +N+  +  Y G   
Sbjct: 240 GT--DRGACQFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-- 295

Query: 891 RKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIE 939
                   PY     L H VLLVGYG       +    PYW+++NSWG    + G++KI 
Sbjct: 296 -----VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGENWGESGYYKIC 350

Query: 940 RGNNACGIEQIAGYATIDVVKN 961
           RG N CG++ +   +T+  V+ 
Sbjct: 351 RGRNICGVDSMV--STVAAVQT 370



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 152/311 (48%), Gaps = 46/311 (14%)

Query: 303 YANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSERTYE 354
           YA+ EE   RF+ FK +  +  +H++      +G ++FSD +  E      F+       
Sbjct: 69  YASQEEHDYRFKIFKSNLRRAERHQKLDPTATHGVTQFSDLTHSE------FRRQFLGLR 122

Query: 355 RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYA 414
           R+   ++  E  ++       +P  +DWR+K       +Q +CGSCW+FS  G LEG   
Sbjct: 123 RLRLPKDANEAPMLPTND---LPADFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGANY 179

Query: 415 IKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEYTHQA-GLESEKDYPYR 465
           + TGKLV  S+ QLV+C  +C       C  GC+G  +    EYT +A GL  E+DYPY 
Sbjct: 180 LATGKLVSLSEQQLVDCDHECDPAEEGACDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 239

Query: 466 NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPI 525
               ++  C +DK+K+        +     + +   L K GPL+V +N+  +  Y G   
Sbjct: 240 --GTDRGACQFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-- 295

Query: 526 RKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIE 574
                   PY     L H VLLVGYG       +  + PYW+ +NSWG    + G++KI 
Sbjct: 296 -----VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGENWGESGYYKIC 350

Query: 575 RGNNACGIEQI 585
           RG N CG++ +
Sbjct: 351 RGRNICGVDSM 361



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 117/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K       +Q  CGSCW+FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 141 LPADFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGANYLATGKLVSLSEQQLVDCDHEC 200

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY     ++  C +DK+K+     
Sbjct: 201 DPAEEGACDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT--DRGACQFDKTKIAAKVA 258

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 259 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVL 311

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 312 LVGYGSAGYAPIRMKEKPYWIIKNSWGENWGESGYYKICRGRNICGVDSM 361



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 306  LDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGENWGESGYYKICRGRNICGVDSM 361


>gi|226477902|emb|CAX72658.1| Cathepsin L precursor [Schistosoma japonicum]
 gi|226488903|emb|CAX74801.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 156/324 (48%), Gaps = 28/324 (8%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSD 700
           NI   +K F +   R Y N  E  +RF  F  +  K  E            + G + F+D
Sbjct: 57  NIGAAWKFFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTD 116

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
           ++  E+    G+    R+  RI     K +       +   +PD  DWR+     P  +Q
Sbjct: 117 KTEYELRKLRGY----RSACRIA----KPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQ 168

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH- 817
             CGSCWAFS  G +EGQ+  KT +LV  S+ QL++C+K    +GC+G   + + +Y   
Sbjct: 169 GQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRD 228

Query: 818 QAGLESEKDYPYKNANG-EKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSV 875
             G++SE  YPY + +G E  +C ++ + +    TG   +H      +   +   GP+SV
Sbjct: 229 NEGIDSEISYPYISGDGDENVRCLFNSTNIMAQVTGYINIHEGDERALMNAVATIGPVSV 288

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPY--DLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +N+ L           +D  C+    DL H VLLVGYG +D  PYWL++NSWG    D+
Sbjct: 289 AINAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDK 348

Query: 934 GFFKIER-GNNACGIEQIAGYATI 956
           G+ KI +   N CG+   A Y  +
Sbjct: 349 GYVKILKDSKNMCGVASAASYPLV 372



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 157/325 (48%), Gaps = 29/325 (8%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSD 334
           NI   +K F +   R Y N  E  +RF  F  +  K  E            + G + F+D
Sbjct: 57  NIGAAWKFFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTD 116

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
           ++  E+    G+    R+  RI     K +       +   +PD  DWR+     P  +Q
Sbjct: 117 KTEYELRKLRGY----RSACRIA----KPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQ 168

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCWAFS  G +EGQ+  KT +LV  S+ QL++C+K   G  GC+G  ++   +Y  
Sbjct: 169 GQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSY-GNNGCEGGLMDLAFQYVR 227

Query: 453 -QAGLESEKDYPYRNGNG-EKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLS 509
              G++SE  YPY +G+G E  +C ++ + +    TG   ++      +   +   GP+S
Sbjct: 228 DNEGIDSEISYPYISGDGDENVRCLFNSTNIMAQVTGYINIHEGDERALMNAVATIGPVS 287

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY--DLGHAVLLVGYGKQDDIPYWLARNSWGPIGPD 567
           V +N+ L  F        +D  C+    DL H VLLVGYG +D  PYWL +NSWG    D
Sbjct: 288 VAINAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGD 347

Query: 568 EGFFKIER-GNNACGIEQIAGYATI 591
           +G+ KI +   N CG+   A Y  +
Sbjct: 348 KGYVKILKDSKNMCGVASAASYPLV 372



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 120/223 (53%), Gaps = 8/223 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR+     P  +Q  CGSCWAFS  G +EGQ+  KT +LV  S+ QL++C+K  
Sbjct: 150 LPDRVDWRRNGAVTPVKNQGQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSY 209

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-EKFKCAYDKSKVKL-FTGKDFLH 125
             +GC+G   + + +Y     G++SE  YPY + +G E  +C ++ + +    TG   +H
Sbjct: 210 GNNGCEGGLMDLAFQYVRDNEGIDSEISYPYISGDGDENVRCLFNSTNIMAQVTGYINIH 269

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY--DLGHAVLLVGYGKQ 183
                 +   +   GP+SV +N+ L           +D  C+    DL H VLLVGYG +
Sbjct: 270 EGDERALMNAVATIGPVSVAINAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIE 329

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           D  PYWL++NSWG    D+G+ KI +   N CG+   A Y  +
Sbjct: 330 DGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCGVASAASYPLV 372



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 18/119 (15%)

Query: 924  NSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKN---------------DETCSPY 968
            NS   +    G+  I  G+    +  +A    + V  N               D  C+  
Sbjct: 254  NSTNIMAQVTGYINIHEGDERALMNAVATIGPVSVAINAGLSSFSMYKSGIYSDPECASA 313

Query: 969  --DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 1024
              DL H VLLVGYG +D  PYWL++NSWG    D+G+ KI +   N CG+   A Y  +
Sbjct: 314  SEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCGVASAASYPLV 372


>gi|28932706|gb|AAO60047.1| midgut cysteine proteinase 4 [Rhipicephalus appendiculatus]
          Length = 345

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 24/273 (8%)

Query: 329 TSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
            + F+D +P+E++   TG+K             +++ ++ +     G  P+  +WR+   
Sbjct: 87  VNHFADMTPDEVVANYTGYK---------PPSAQQLAEIPLYAPLFGDTPEFIEWRENGF 137

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQP 447
             P  +Q  CGSCWAFS  G LEGQ   +T +L+  S+  L++CA Q  G  GC+G + P
Sbjct: 138 VTPVKNQGQCGSCWAFSSTGALEGQVFKRTRRLISLSEQNLMDCAGQRYGNNGCNGGQMP 197

Query: 448 --IEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKS---KVKLFTGKDFLYFNGSETMKKI 501
              +Y   A GL++E  YPYR G    F+C +  S   +     G   +       ++  
Sbjct: 198 GAFQYVQDAGGLDTEARYPYRQGT--NFQCQFSNSFEARRVSVNGHTRVPPRNERVLQDA 255

Query: 502 LYKYGPLSVGLNSH---LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLAR 558
           +   GP+S+ +N+     + + NG      +  C P  L HAVLLVGYG++  +PYW+ +
Sbjct: 256 VANVGPISIAINASPQTFMFYKNGI---YGEPNCDPRGLNHAVLLVGYGEERGVPYWIVK 312

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           NSWGP   + G+ KI R  N CG+ Q   +  +
Sbjct: 313 NSWGPGWGEGGYIKILRNRNVCGMSQDPSFPNL 345



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 137/273 (50%), Gaps = 25/273 (9%)

Query: 695 TSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
            + F+D +P+E++   TG+K             +++ ++ +     G  P+  +WR+   
Sbjct: 87  VNHFADMTPDEVVANYTGYK---------PPSAQQLAEIPLYAPLFGDTPEFIEWRENGF 137

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFE 810
             P  +Q  CGSCWAFS  G LEGQ   +T +L+  S+  L++CA Q    +GC+G    
Sbjct: 138 VTPVKNQGQCGSCWAFSSTGALEGQVFKRTRRLISLSEQNLMDCAGQRYGNNGCNGGQMP 197

Query: 811 PSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKS---KVKLFTGKDFLHFNGSETMKKI 866
            + +Y   AG L++E  YPY+   G  F+C +  S   +     G   +       ++  
Sbjct: 198 GAFQYVQDAGGLDTEARYPYRQ--GTNFQCQFSNSFEARRVSVNGHTRVPPRNERVLQDA 255

Query: 867 LYKYGPLSVLLNSD---LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 923
           +   GP+S+ +N+     +   NG      +  C P  L HAVLLVGYG++  +PYW+V+
Sbjct: 256 VANVGPISIAINASPQTFMFYKNGI---YGEPNCDPRGLNHAVLLVGYGEERGVPYWIVK 312

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           NSWGP   + G+ KI R  N CG+ Q   +  +
Sbjct: 313 NSWGPGWGEGGYIKILRNRNVCGMSQDPSFPNL 345



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 15/227 (6%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P+  +WR+     P  +Q  CGSCWAFS  G LEGQ   +T +L+  S+  L++CA 
Sbjct: 124 GDTPEFIEWRENGFVTPVKNQGQCGSCWAFSSTGALEGQVFKRTRRLISLSEQNLMDCAG 183

Query: 69  Q---CSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKS---KVKLFTGK 121
           Q    +GC+G     + +Y   AG L++E  YPY+   G  F+C +  S   +     G 
Sbjct: 184 QRYGNNGCNGGQMPGAFQYVQDAGGLDTEARYPYRQ--GTNFQCQFSNSFEARRVSVNGH 241

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSD---LIHDYNGTPIRKNDETCSPYDLGHAVLLV 178
             +       ++  +   GP+S+ +N+     +   NG      +  C P  L HAVLLV
Sbjct: 242 TRVPPRNERVLQDAVANVGPISIAINASPQTFMFYKNGI---YGEPNCDPRGLNHAVLLV 298

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GYG++  +PYW+V+NSWGP   + G+ KI R  N CG+ Q   +  +
Sbjct: 299 GYGEERGVPYWIVKNSWGPGWGEGGYIKILRNRNVCGMSQDPSFPNL 345



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 41/66 (62%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +  +  C P  L HAVLLVGYG++  +PYW+V+NSWGP   + G+ KI R  N CG+ Q 
Sbjct: 280  IYGEPNCDPRGLNHAVLLVGYGEERGVPYWIVKNSWGPGWGEGGYIKILRNRNVCGMSQD 339

Query: 1019 AGYATI 1024
              +  +
Sbjct: 340  PSFPNL 345


>gi|55735421|gb|AAV59468.1| cathepsin [Bombyx mori NPV]
          Length = 323

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 168/337 (49%), Gaps = 28/337 (8%)

Query: 632 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 685
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 686 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
             +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDFVDAG 173

Query: 804 CDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--S 860
           C+G     + E      G++ E DYPY+  N     C  + +K  L   KD   +     
Sbjct: 174 CNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN---CRMNSNKF-LVQVKDCYRYITVYE 229

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++NIPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 956
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 164/337 (48%), Gaps = 27/337 (8%)

Query: 266 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 319
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 320 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDFVDAG 173

Query: 438 CGGCDGLEQPIE-YTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG-S 495
           C G   L    E      G++ E DYPY   N     C  + +K  +     + Y     
Sbjct: 174 CNG-GLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKFLVQVKDCYRYITVYE 229

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           E +K +L   GP+ + +++  I  Y    I+     C    L HAVLLVGYG +++IPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 591
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 119/221 (53%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ Q+++C  
Sbjct: 110 GKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GC+G     + E      G++ E DYPY+  N     C  + +K  L   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN---CRMNSNKF-LVQVKDCYRYI 225

Query: 128 G--SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 226 TVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 282 IPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IPYW  +N+WG    ++GFF++++  NACG+  ++A  A 
Sbjct: 262  CFDSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAV 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|395852405|ref|XP_003798729.1| PREDICTED: cathepsin W [Otolemur garnettii]
          Length = 367

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 170/337 (50%), Gaps = 34/337 (10%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK----KHERYGTSEF-----SDRSPEEI 706
           E FK F V+  R Y+N  E   R + F  +  K    + E  GT+EF     SD + EE 
Sbjct: 40  EVFKLFQVQFNRSYSNPAEHSRRLDIFAHNLAKAQQLQEEDLGTAEFGMTSLSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGS 765
               G       +++ V +  ++ + +   ++   +P   DWR K  +     +Q  C  
Sbjct: 100 GKIFG-------HQKAVGEVPRMGRKVGSEQQGETLPRTCDWRNKAGIISRIKNQENCKC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + A  +E  + IK  + VE S  +L++C +   GC G F ++  I   + +GL SE
Sbjct: 153 CWAMAAADNIEALWGIKYHQSVEVSVQELLDCNRCGDGCQGGFVWDAFITVLNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIH 883
           KDYP+K A+ +  +C  +K + K+   +DF+    +E  + + L  +GP++V +N  L+ 
Sbjct: 213 KDYPFK-ASVKTHRCLANKYR-KVAWIQDFIMLEDNEHKIAQYLATHGPITVTINMKLLQ 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-----------NIPYWLVRNSWGPIGPD 932
            Y    I+    TC P  + H+VLLVG+G +            + PYW+++NSWG    +
Sbjct: 271 HYKKGVIKAKPTTCDPQLVNHSVLLVGFGAETVSSQSHLRPHRSTPYWILKNSWGAHWGE 330

Query: 933 EGFFKIERGNNACGIEQIAGYATID--VVKNDETCSP 967
           EG+F++ RG+N+CGI +    A +D  V K   +C P
Sbjct: 331 EGYFRLHRGSNSCGITKYPFTARVDQPVRKLPVSCPP 367



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 164/331 (49%), Gaps = 31/331 (9%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK----KHERYGTSEF-----SDRSPEEI 340
           E FK F V+  R Y+N  E   R + F  +  K    + E  GT+EF     SD + EE 
Sbjct: 40  EVFKLFQVQFNRSYSNPAEHSRRLDIFAHNLAKAQQLQEEDLGTAEFGMTSLSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGS 399
               G       +++ V +  ++ + +   ++   +P   DWR K  +     +Q  C  
Sbjct: 100 GKIFG-------HQKAVGEVPRMGRKVGSEQQGETLPRTCDWRNKAGIISRIKNQENCKC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + A  +E  + IK  + VE S  +L++C +   GC G    +  I   + +GL SE
Sbjct: 153 CWAMAAADNIEALWGIKYHQSVEVSVQELLDCNRCGDGCQGGFVWDAFITVLNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIH 518
           KDYP++  + +  +C  +K + K+   +DF+    +E  + + L  +GP++V +N  L+ 
Sbjct: 213 KDYPFK-ASVKTHRCLANKYR-KVAWIQDFIMLEDNEHKIAQYLATHGPITVTINMKLLQ 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-----------DIPYWLARNSWGPIGPD 567
            Y    I+    TC P  + H+VLLVG+G +              PYW+ +NSWG    +
Sbjct: 271 HYKKGVIKAKPTTCDPQLVNHSVLLVGFGAETVSSQSHLRPHRSTPYWILKNSWGAHWGE 330

Query: 568 EGFFKIERGNNACGIEQIAGYATIDVVIQRL 598
           EG+F++ RG+N+CGI +    A +D  +++L
Sbjct: 331 EGYFRLHRGSNSCGITKYPFTARVDQPVRKL 361



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 130/236 (55%), Gaps = 16/236 (6%)

Query: 11  VPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           +P   DWR K  +     +Q +C  CWA + A  +E  + IK  + VE S  +L++C + 
Sbjct: 128 LPRTCDWRNKAGIISRIKNQENCKCCWAMAAADNIEALWGIKYHQSVEVSVQELLDCNRC 187

Query: 70  CSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
             GC G F ++  I   + +GL SEKDYP+K A+ +  +C  +K + K+   +DF+    
Sbjct: 188 GDGCQGGFVWDAFITVLNNSGLASEKDYPFK-ASVKTHRCLANKYR-KVAWIQDFIMLED 245

Query: 129 SE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD--- 184
           +E  + + L  +GP++V +N  L+  Y    I+    TC P  + H+VLLVG+G +    
Sbjct: 246 NEHKIAQYLATHGPITVTINMKLLQHYKKGVIKAKPTTCDPQLVNHSVLLVGFGAETVSS 305

Query: 185 --------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQRL 232
                   + PYW+++NSWG    +EG+F++ RG+N+CGI +    A +D  +++L
Sbjct: 306 QSHLRPHRSTPYWILKNSWGAHWGEEGYFRLHRGSNSCGITKYPFTARVDQPVRKL 361



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 11/73 (15%)

Query: 964  TCSPYDLGHAVLLVGYGKQD-----------DIPYWLVRNSWGPIGPDEGFFKIERGNNA 1012
            TC P  + H+VLLVG+G +              PYW+++NSWG    +EG+F++ RG+N+
Sbjct: 283  TCDPQLVNHSVLLVGFGAETVSSQSHLRPHRSTPYWILKNSWGAHWGEEGYFRLHRGSNS 342

Query: 1013 CGIEQIAGYATID 1025
            CGI +    A +D
Sbjct: 343  CGITKYPFTARVD 355


>gi|255550445|ref|XP_002516273.1| cysteine protease, putative [Ricinus communis]
 gi|223544759|gb|EEF46275.1| cysteine protease, putative [Ricinus communis]
          Length = 358

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 149/315 (47%), Gaps = 30/315 (9%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTS------EFSDRSPEEILC 708
           +F  F+ + G++Y +++E+K RF  F +  D  +   R G S      +F+D        
Sbjct: 58  SFSRFVYRHGKRYQSEDEMKMRFAIFSENLDFIRSTNRKGLSYTLAVNDFAD-------- 109

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRKKNVTGPAGDQAACGSCW 767
                W E    R+ A +          +  G  +PD  DWR+  +  P  +Q  CGSCW
Sbjct: 110 ---LTWQEFQKHRLGAAQNCSATTKGNHKLTGVALPDTKDWREVGIVSPVKNQGHCGSCW 166

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESE 824
            FS  G LE  Y    GK +  S+ QLV+CA   +  GC G     + EY  +  GLE+E
Sbjct: 167 TFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNFGCHGGLPSQAFEYIKYNGGLETE 226

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSDLIH 883
           + YPY    GE   C +    V +       +     + +K+ +    P+SV        
Sbjct: 227 EAYPY---TGEDGACKFSSENVGIQVLDSVNITLGAEDELKEAVGLVRPVSVAFEVVSGF 283

Query: 884 DYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
            +  + +  +D TC  +P D+ HAVL VGYG +D +PYWLV+NSWG    D G+FK+E G
Sbjct: 284 RFYKSGVYTSD-TCGSTPMDVNHAVLAVGYGVEDGVPYWLVKNSWGENWGDHGYFKMEMG 342

Query: 942 NNACGIEQIAGYATI 956
            N CG+   A Y  +
Sbjct: 343 KNMCGVATCASYPVV 357



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 145/314 (46%), Gaps = 27/314 (8%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTS------EFSDRSPEEILC 342
           +F  F+ + G++Y +++E+K RF  F +  D  +   R G S      +F+D        
Sbjct: 58  SFSRFVYRHGKRYQSEDEMKMRFAIFSENLDFIRSTNRKGLSYTLAVNDFAD-------- 109

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRKKNVTGPAGDQAACGSCW 401
                W E    R+ A +          +  G  +PD  DWR+  +  P  +Q  CGSCW
Sbjct: 110 ---LTWQEFQKHRLGAAQNCSATTKGNHKLTGVALPDTKDWREVGIVSPVKNQGHCGSCW 166

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESE 459
            FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GLE+E
Sbjct: 167 TFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNFGCHGGLPSQAFEYIKYNGGLETE 226

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-HLI 517
           + YPY    GE   C +    V +          G+E  +K+ +    P+SV        
Sbjct: 227 EAYPY---TGEDGACKFSSENVGIQVLDSVNITLGAEDELKEAVGLVRPVSVAFEVVSGF 283

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FY       +    +P D+ HAVL VGYG +D +PYWL +NSWG    D G+FK+E G 
Sbjct: 284 RFYKSGVYTSDTCGSTPMDVNHAVLAVGYGVEDGVPYWLVKNSWGENWGDHGYFKMEMGK 343

Query: 578 NACGIEQIAGYATI 591
           N CG+   A Y  +
Sbjct: 344 NMCGVATCASYPVV 357



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 113/221 (51%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD  DWR+  +  P  +Q  CGSCW FS  G LE  Y    GK +  S+ QLV+CA   
Sbjct: 141 LPDTKDWREVGIVSPVKNQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAF 200

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
           +  GC G     + EY  +  GLE+E+ YPY    GE   C +    V +       +  
Sbjct: 201 NNFGCHGGLPSQAFEYIKYNGGLETEEAYPY---TGEDGACKFSSENVGIQVLDSVNITL 257

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQD 184
              + +K+ +    P+SV         +  + +  +D TC  +P D+ HAVL VGYG +D
Sbjct: 258 GAEDELKEAVGLVRPVSVAFEVVSGFRFYKSGVYTSD-TCGSTPMDVNHAVLAVGYGVED 316

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +PYWLV+NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 317 GVPYWLVKNSWGENWGDHGYFKMEMGKNMCGVATCASYPVV 357



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V   +TC  +P D+ HAVL VGYG +D +PYWLV+NSWG    D G+FK+E G N CG+ 
Sbjct: 290  VYTSDTCGSTPMDVNHAVLAVGYGVEDGVPYWLVKNSWGENWGDHGYFKMEMGKNMCGVA 349

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 350  TCASYPVV 357


>gi|292397748|ref|YP_003517814.1| cathepsin [Lymantria xylina MNPV]
 gi|291065465|gb|ADD73783.1| cathepsin [Lymantria xylina MNPV]
          Length = 335

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 158/307 (51%), Gaps = 34/307 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER-----------YGTSEFSDRSPEEI 706
           F++F+    + Y +D E  +R+  FK + H+ + +           YG ++FSD S  E+
Sbjct: 35  FESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYGINKFSDLSKSEL 94

Query: 707 LCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
           + K TG    +R      A       +L +    GP+   +DWR++N      +Q ACG+
Sbjct: 95  IAKFTGLSIPQR------ASNFCKTIVLNQPPDKGPL--HFDWREQNKVTSIKNQGACGA 146

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESE 824
           CWAF+    +E Q+A++  +LV+ S+ QL++C     GC+G     +  E     G+++E
Sbjct: 147 CWAFATLASVESQFAMRHNRLVDLSEQQLIDCDSVDMGCNGGLLHTAFEEIIRMGGVQAE 206

Query: 825 KDYPYKNANGEKFKCAYDKSK---VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SD 880
            DYP+    G   +C  D+ +   V L     ++  N  E +K +L   GP+ + ++ +D
Sbjct: 207 LDYPFV---GRDRRCGVDRHRPYVVSLVGCYRYVMVN-EEKLKDLLRAVGPIPMAIDAAD 262

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
           +++ Y G        +C    L HAVLLVGYG ++ +PYW  +N+WG    + G+F++ +
Sbjct: 263 IVNYYRGVI-----SSCENNGLNHAVLLVGYGVENGVPYWAFKNTWGDDWGENGYFRVRQ 317

Query: 941 GNNACGI 947
             NACG+
Sbjct: 318 NINACGM 324



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 158/309 (51%), Gaps = 37/309 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER-----------YGTSEFSDRSPEEI 340
           F++F+    + Y +D E  +R+  FK + H+ + +           YG ++FSD S  E+
Sbjct: 35  FESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYGINKFSDLSKSEL 94

Query: 341 LCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
           + K TG    +R      A       +L +    GP+   +DWR++N      +Q ACG+
Sbjct: 95  IAKFTGLSIPQR------ASNFCKTIVLNQPPDKGPL--HFDWREQNKVTSIKNQGACGA 146

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI--EYTHQAGLE 457
           CWAF+    +E Q+A++  +LV+ S+ QL++C     GC G  GL      E     G++
Sbjct: 147 CWAFATLASVESQFAMRHNRLVDLSEQQLIDCDSVDMGCNG--GLLHTAFEEIIRMGGVQ 204

Query: 458 SEKDYPYRNGNGEKFKCAYDKSK---VKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN- 513
           +E DYP+    G   +C  D+ +   V L     ++  N  E +K +L   GP+ + ++ 
Sbjct: 205 AELDYPFV---GRDRRCGVDRHRPYVVSLVGCYRYVMVN-EEKLKDLLRAVGPIPMAIDA 260

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           + ++++Y G        +C    L HAVLLVGYG ++ +PYW  +N+WG    + G+F++
Sbjct: 261 ADIVNYYRGVI-----SSCENNGLNHAVLLVGYGVENGVPYWAFKNTWGDDWGENGYFRV 315

Query: 574 ERGNNACGI 582
            +  NACG+
Sbjct: 316 RQNINACGM 324



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 115/210 (54%), Gaps = 14/210 (6%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  +DWR++N      +Q  CG+CWAF+    +E Q+A++  +LV+ S+ QL++C     
Sbjct: 124 PLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLVDLSEQQLIDCDSVDM 183

Query: 72  GCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSK---VKLFTGKDFLHFN 127
           GC+G     +  E     G+++E DYP+    G   +C  D+ +   V L     ++  N
Sbjct: 184 GCNGGLLHTAFEEIIRMGGVQAELDYPFV---GRDRRCGVDRHRPYVVSLVGCYRYVMVN 240

Query: 128 GSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
             E +K +L   GP+ + ++ +D+++ Y G        +C    L HAVLLVGYG ++ +
Sbjct: 241 -EEKLKDLLRAVGPIPMAIDAADIVNYYRGVI-----SSCENNGLNHAVLLVGYGVENGV 294

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           PYW  +N+WG    + G+F++ +  NACG+
Sbjct: 295 PYWAFKNTWGDDWGENGYFRVRQNINACGM 324



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 35/53 (66%)

Query: 963  ETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
             +C    L HAVLLVGYG ++ +PYW  +N+WG    + G+F++ +  NACG+
Sbjct: 272  SSCENNGLNHAVLLVGYGVENGVPYWAFKNTWGDDWGENGYFRVRQNINACGM 324


>gi|18407961|ref|NP_566880.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
 gi|73622182|sp|Q8RWQ9.1|ALEUL_ARATH RecName: Full=Thiol protease aleurain-like; Flags: Precursor
 gi|20147207|gb|AAM10319.1| AT3g45310/F18N11_70 [Arabidopsis thaliana]
 gi|332644500|gb|AEE78021.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
          Length = 358

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 149/313 (47%), Gaps = 25/313 (7%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGTS--EFSDRSPEEILC 342
           +F  F  + G++Y + EE+K RF  FK++       +KK   Y  S  +F+D + +E   
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQ- 116

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
               ++     +   A  +   K+      +  VPD  DWR+  +  P  +Q  CGSCW 
Sbjct: 117 ----RYKLGAAQNCSATLKGSHKI-----TEATVPDTKDWREDGIVSPVKEQGHCGSCWT 167

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GL++E+
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEE 227

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-HLIH 518
            YPY   +G    C +    + +          G+E  +K  +    P+SV     H   
Sbjct: 228 AYPYTGKDG---GCKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVHEFR 284

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY       N    +P D+ HAVL VGYG +DD+PYWL +NSWG    D G+FK+E G N
Sbjct: 285 FYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKN 344

Query: 579 ACGIEQIAGYATI 591
            CG+   + Y  +
Sbjct: 345 MCGVATCSSYPVV 357



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 152/315 (48%), Gaps = 30/315 (9%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGTS--EFSDRSPEEILC 708
           +F  F  + G++Y + EE+K RF  FK++       +KK   Y  S  +F+D + +E   
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQ- 116

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
               ++     +   A  +   K+      +  VPD  DWR+  +  P  +Q  CGSCW 
Sbjct: 117 ----RYKLGAAQNCSATLKGSHKI-----TEATVPDTKDWREDGIVSPVKEQGHCGSCWT 167

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA   +  GC G     + EY  +  GL++E+
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEE 227

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
            YPY   +G    C +    + +       +     + +K  +    P+SV    +++H+
Sbjct: 228 AYPYTGKDG---GCKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAF--EVVHE 282

Query: 885 ---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
              Y       N    +P D+ HAVL VGYG +D++PYWL++NSWG    D G+FK+E G
Sbjct: 283 FRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMG 342

Query: 942 NNACGIEQIAGYATI 956
            N CG+   + Y  +
Sbjct: 343 KNMCGVATCSSYPVV 357



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 114/225 (50%), Gaps = 12/225 (5%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  VPD  DWR+  +  P  +Q  CGSCW FS  G LE  Y    GK +  S+ QLV+CA
Sbjct: 138 EATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCA 197

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
              +  GC G     + EY  +  GL++E+ YPY   +G    C +    + +       
Sbjct: 198 GTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG---GCKFSAKNIGVQVRDSVN 254

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGY 180
           +     + +K  +    P+SV    +++H+   Y       N    +P D+ HAVL VGY
Sbjct: 255 ITLGAEDELKHAVGLVRPVSVAF--EVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGY 312

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           G +D++PYWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 313 GVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMCGVATCSSYPVV 357



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V    TC  +P D+ HAVL VGYG +DD+PYWL++NSWG    D G+FK+E G N CG+ 
Sbjct: 290  VFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMCGVA 349

Query: 1017 QIAGYATI 1024
              + Y  +
Sbjct: 350  TCSSYPVV 357


>gi|158524604|gb|ABW71226.1| cysteine protease [Nicotiana tabacum]
          Length = 360

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 150/313 (47%), Gaps = 26/313 (8%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKK---HERYGTSEFSDRSPEEILC 708
           +F  F  + G++Y + EEIK+RFE F  +      H K     + G +EF+D        
Sbjct: 60  SFVRFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD-------- 111

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
                W E   +R+ A +         V+  +  +P+  DWR+  +  P  +Q  CGSCW
Sbjct: 112 ---LTWDEFRRDRLGAAQNCSATTKGNVKLTNAVLPETKDWREDGIVSPVKNQGKCGSCW 168

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESE 824
            FS  G LE  Y+   GK +  S+ QLV+CA   +  GC+G     + EY     GL++E
Sbjct: 169 TFSTTGALEAAYSQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTE 228

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIH 883
           + YPY   NG   K + +   VK+    + +     + +K  +    P+S+         
Sbjct: 229 EAYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAEDELKYAVALVRPVSIAFEVIKGFK 286

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
            Y        +   +P D+ HAVL VGYG ++ +PYWL++NSWG    D+G+FK+E G N
Sbjct: 287 QYKSGVYSSTECGNTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDDGYFKMEMGKN 346

Query: 944 ACGIEQIAGYATI 956
            CGI   A Y  +
Sbjct: 347 MCGIATCASYPVV 359



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 151/318 (47%), Gaps = 35/318 (11%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKK---HERYGTSEFSDRSPEEILC 342
           +F  F  + G++Y + EEIK+RFE F  +      H K     + G +EF+D        
Sbjct: 60  SFVRFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD-------- 111

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
                W E   +R+ A +         V+  +  +P+  DWR+  +  P  +Q  CGSCW
Sbjct: 112 ---LTWDEFRRDRLGAAQNCSATTKGNVKLTNAVLPETKDWREDGIVSPVKNQGKCGSCW 168

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESE 459
            FS  G LE  Y+   GK +  S+ QLV+CA   +  G   GL  Q  EY     GL++E
Sbjct: 169 TFSTTGALEAAYSQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTE 228

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSV------GLN 513
           + YPY   NG   K + +   VK+    + +     + +K  +    P+S+      G  
Sbjct: 229 EAYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAEDELKYAVALVRPVSIAFEVIKGFK 286

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
            +    Y+ T         +P D+ HAVL VGYG ++ +PYWL +NSWG    D+G+FK+
Sbjct: 287 QYKSGVYSSTECGN-----TPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDDGYFKM 341

Query: 574 ERGNNACGIEQIAGYATI 591
           E G N CGI   A Y  +
Sbjct: 342 EMGKNMCGIATCASYPVV 359



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 113/222 (50%), Gaps = 6/222 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y+   GK +  S+ QLV+CA
Sbjct: 140 NAVLPETKDWREDGIVSPVKNQGKCGSCWTFSTTGALEAAYSQAFGKGISLSEQQLVDCA 199

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
              +  GC+G     + EY     GL++E+ YPY   NG   K + +   VK+    + +
Sbjct: 200 GAFNNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNG-LCKFSSENVGVKVIDSVN-I 257

Query: 125 HFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
                + +K  +    P+S+          Y        +   +P D+ HAVL VGYG +
Sbjct: 258 TLGAEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYSSTECGNTPMDVNHAVLAVGYGVE 317

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           + +PYWL++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 318 NGVPYWLIKNSWGADWGDDGYFKMEMGKNMCGIATCASYPVV 359


>gi|323454466|gb|EGB10336.1| hypothetical protein AURANDRAFT_22962 [Aureococcus anophagefferens]
          Length = 416

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 163/342 (47%), Gaps = 30/342 (8%)

Query: 648 TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFS 699
           T D  +    F  FI +  + Y    E  +RF  F ++            H  +G + F+
Sbjct: 79  TLDTRDQKSLFDQFIDEYSKSYDTTHEYNDRFTIFSKNLNYIDALNTQNPHALFGLNVFA 138

Query: 700 DRSPEEILCKTGFKWSERTYERIV----ADREKVEKMLMEVEKD-GPVPDAWDWRKKNVT 754
           D++ EE   +     S   Y R+     +D           E D G +PD +DWR+    
Sbjct: 139 DQTEEERSKRRMTDPSITNYTRVGWASGSDCAACNLYPAFGEYDMGNLPDDFDWRELGAV 198

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
               +QA CGSCW+FS A  LEG + + TG L  ++  QLVEC     GCDG +   +++
Sbjct: 199 TRVKNQAYCGSCWSFSTAADLEGTHYLATGDLESYAPQQLVECNTMNLGCDGGYPFAAMQ 258

Query: 815 Y-THQAGLESEKDYPYK-----NANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILY 868
           Y +H  G+ + +  PYK     N   E    A+      +  G D+        M+  L 
Sbjct: 259 YLSHFGGMVTWETMPYKKIELLNEKLEDGDVAHISGWQMVAMGADY-----ESLMRVTLV 313

Query: 869 KYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-----IPYWLV 922
           K GPLS+  N++ +  Y +G     +  TC P  L HAVL+VGYG Q       +PYW++
Sbjct: 314 KNGPLSIAFNANGMDYYVHGVDGDGDMFTCDPTSLDHAVLVVGYGVQHTDGNGKVPYWVI 373

Query: 923 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKNDET 964
           +NSW  +  ++G++++ RG+NACG+  +  ++ +    +D++
Sbjct: 374 KNSWDDVWGEDGYYRLVRGSNACGVANMVVHSIVKSTTDDDS 415



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 153/334 (45%), Gaps = 29/334 (8%)

Query: 282 TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFS 333
           T D  +    F  FI +  + Y    E  +RF  F ++            H  +G + F+
Sbjct: 79  TLDTRDQKSLFDQFIDEYSKSYDTTHEYNDRFTIFSKNLNYIDALNTQNPHALFGLNVFA 138

Query: 334 DRSPEEILCKTGFKWSERTYERIV----ADREKVEKMLMEVEKD-GPVPDAWDWRKKNVT 388
           D++ EE   +     S   Y R+     +D           E D G +PD +DWR+    
Sbjct: 139 DQTEEERSKRRMTDPSITNYTRVGWASGSDCAACNLYPAFGEYDMGNLPDDFDWRELGAV 198

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
               +QA CGSCW+FS A  LEG + + TG L  ++  QLVEC     GC G        
Sbjct: 199 TRVKNQAYCGSCWSFSTAADLEGTHYLATGDLESYAPQQLVECNTMNLGCDGGYPFAAMQ 258

Query: 449 EYTHQAGLESEKDYPYR-----NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
             +H  G+ + +  PY+     N   E    A+      +  G D+        M+  L 
Sbjct: 259 YLSHFGGMVTWETMPYKKIELLNEKLEDGDVAHISGWQMVAMGADY-----ESLMRVTLV 313

Query: 504 KYGPLSVGLNSHLIHFY-NGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-----IPYWLA 557
           K GPLS+  N++ + +Y +G     +  TC P  L HAVL+VGYG Q       +PYW+ 
Sbjct: 314 KNGPLSIAFNANGMDYYVHGVDGDGDMFTCDPTSLDHAVLVVGYGVQHTDGNGKVPYWVI 373

Query: 558 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           +NSW  +  ++G++++ RG+NACG+  +  ++ +
Sbjct: 374 KNSWDDVWGEDGYYRLVRGSNACGVANMVVHSIV 407



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 17/229 (7%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +PD +DWR+        +QA CGSCW+FS A  LEG + + TG L  ++  QLVEC  
Sbjct: 184 GNLPDDFDWRELGAVTRVKNQAYCGSCWSFSTAADLEGTHYLATGDLESYAPQQLVECNT 243

Query: 69  QCSGCDGCFFEPSIEY-THQAGLESEKDYPYK-----NANGEKFKCAYDKSKVKLFTGKD 122
              GCDG +   +++Y +H  G+ + +  PYK     N   E    A+      +  G D
Sbjct: 244 MNLGCDGGYPFAAMQYLSHFGGMVTWETMPYKKIELLNEKLEDGDVAHISGWQMVAMGAD 303

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYG 181
           +        M+  L K GPLS+  N++ +  Y +G     +  TC P  L HAVL+VGYG
Sbjct: 304 Y-----ESLMRVTLVKNGPLSIAFNANGMDYYVHGVDGDGDMFTCDPTSLDHAVLVVGYG 358

Query: 182 KQDN-----IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            Q       +PYW+++NSW  +  ++G++++ RG+NACG+  +  ++ +
Sbjct: 359 VQHTDGNGKVPYWVIKNSWDDVWGEDGYYRLVRGSNACGVANMVVHSIV 407



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 5/66 (7%)

Query: 964  TCSPYDLGHAVLLVGYGKQDD-----IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            TC P  L HAVL+VGYG Q       +PYW+++NSW  +  ++G++++ RG+NACG+  +
Sbjct: 342  TCDPTSLDHAVLVVGYGVQHTDGNGKVPYWVIKNSWDDVWGEDGYYRLVRGSNACGVANM 401

Query: 1019 AGYATI 1024
              ++ +
Sbjct: 402  VVHSIV 407


>gi|302774134|ref|XP_002970484.1| hypothetical protein SELMODRAFT_93661 [Selaginella moellendorffii]
 gi|300162000|gb|EFJ28614.1| hypothetical protein SELMODRAFT_93661 [Selaginella moellendorffii]
          Length = 343

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 169/369 (45%), Gaps = 45/369 (12%)

Query: 603 KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 662
           KA+ +I  V LL  V  C     L      QV   ++   +EG            FK F+
Sbjct: 3   KALAII-LVGLLILVVCCSSSNRLDIGKIRQVTDNLEVKDVEGH-----------FKHFM 50

Query: 663 VKRGRQYANDEEIKERFEYF-----------KQDGHKKHERYGTSEFSDRSPEEILCKTG 711
            K G+ Y   EE   R + F           KQD    H   G + F+D +PEE+    G
Sbjct: 51  QKFGKVYGTTEEYVHRLKVFQANLAHVMSLKKQDPTAIH---GITSFADLTPEELSRFLG 107

Query: 712 FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSI 771
           F+       +  ++R   +  L+  +    +P+A+DWR+     P   Q  CGSCW FS 
Sbjct: 108 FR-------KAYSNRVVNQAPLLPTDN---LPEAFDWREHGAVTPVKFQGRCGSCWTFST 157

Query: 772 AGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKN 831
            G++EG   +KTGKL+  S+ QL++C  + +GC+G     + EY    GLE+E+DYPY+ 
Sbjct: 158 TGVVEGANFLKTGKLISLSEEQLIDCDYKDNGCEGGDMLSAYEYVKARGLEAEEDYPYEE 217

Query: 832 ANGEKFK-----CAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 886
             G + K     C Y  SKV              + +   L K GPLS+ L  +++  Y 
Sbjct: 218 L-GYRHKPVRGPCRYQPSKVVATIANYSRVSEDEDQIAANLVKNGPLSIALRGNVLFTYE 276

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
           G         C P ++ H VLLVGYG ++ + YW  +N+W     + G+F++ RG   C 
Sbjct: 277 GGV--ACPRIC-PGEINHGVLLVGYGVENGLRYWTFKNTWTDEFGENGYFRLCRGVGVCD 333

Query: 947 IEQIAGYAT 955
           +    G  +
Sbjct: 334 MNSEVGTVS 342



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 168/370 (45%), Gaps = 46/370 (12%)

Query: 237 KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 296
           KA+ +I  V LL  V  C     L      QV   ++   +EG            FK F+
Sbjct: 3   KALAII-LVGLLILVVCCSSSNRLDIGKIRQVTDNLEVKDVEGH-----------FKHFM 50

Query: 297 VKRGRQYANDEEIKERFEYF-----------KQDGHKKHERYGTSEFSDRSPEEILCKTG 345
            K G+ Y   EE   R + F           KQD    H   G + F+D +PEE+    G
Sbjct: 51  QKFGKVYGTTEEYVHRLKVFQANLAHVMSLKKQDPTAIH---GITSFADLTPEELSRFLG 107

Query: 346 FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSI 405
           F+       +  ++R   +  L+  +    +P+A+DWR+     P   Q  CGSCW FS 
Sbjct: 108 FR-------KAYSNRVVNQAPLLPTDN---LPEAFDWREHGAVTPVKFQGRCGSCWTFST 157

Query: 406 AGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYR 465
            G++EG   +KTGKL+  S+ QL++C  + +GC G D L    EY    GLE+E+DYPY 
Sbjct: 158 TGVVEGANFLKTGKLISLSEEQLIDCDYKDNGCEGGDML-SAYEYVKARGLEAEEDYPYE 216

Query: 466 NGNGEKFK-----CAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY 520
              G + K     C Y  SKV              + +   L K GPLS+ L  +++  Y
Sbjct: 217 E-LGYRHKPVRGPCRYQPSKVVATIANYSRVSEDEDQIAANLVKNGPLSIALRGNVLFTY 275

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
            G         C P ++ H VLLVGYG ++ + YW  +N+W     + G+F++ RG   C
Sbjct: 276 EGGV--ACPRIC-PGEINHGVLLVGYGVENGLRYWTFKNTWTDEFGENGYFRLCRGVGVC 332

Query: 581 GIEQIAGYAT 590
            +    G  +
Sbjct: 333 DMNSEVGTVS 342



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 9/219 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+A+DWR+     P   Q  CGSCW FS  G++EG   +KTGKL+  S+ QL++C  + 
Sbjct: 128 LPEAFDWREHGAVTPVKFQGRCGSCWTFSTTGVVEGANFLKTGKLISLSEEQLIDCDYKD 187

Query: 71  SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFK-----CAYDKSKVKLFTGKDFLH 125
           +GC+G     + EY    GLE+E+DYPY+   G + K     C Y  SKV          
Sbjct: 188 NGCEGGDMLSAYEYVKARGLEAEEDYPYEEL-GYRHKPVRGPCRYQPSKVVATIANYSRV 246

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L K GPLS+ L  +++  Y G         C P ++ H VLLVGYG ++ 
Sbjct: 247 SEDEDQIAANLVKNGPLSIALRGNVLFTYEGGV--ACPRIC-PGEINHGVLLVGYGVENG 303

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           + YW  +N+W     + G+F++ RG   C +    G  +
Sbjct: 304 LRYWTFKNTWTDEFGENGYFRLCRGVGVCDMNSEVGTVS 342



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 32/57 (56%)

Query: 967  PYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            P ++ H VLLVGYG ++ + YW  +N+W     + G+F++ RG   C +    G  +
Sbjct: 286  PGEINHGVLLVGYGVENGLRYWTFKNTWTDEFGENGYFRLCRGVGVCDMNSEVGTVS 342


>gi|449516391|ref|XP_004165230.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 387

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 158/323 (48%), Gaps = 46/323 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY------GTSEFSDRSPEEILCK 709
           F  F  + G+ YA +EE   RF+ FK +  +  +H+ +      G ++FSD +P E   +
Sbjct: 59  FSLFKRRFGKSYATEEEHDRRFKIFKANMRRAERHQSFDPSAIHGVTQFSDLTPFEF--R 116

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F        R+  D      +  E      +P  +DWR+        +Q +CGSCW+F
Sbjct: 117 KAFLGLRGHRLRLPVDTNAAPILPTE-----NLPIDFDWRQHGGVTRVKNQGSCGSCWSF 171

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG   + TG+LV  S+ QLV+C  +C         SGC+G     + EYT +A 
Sbjct: 172 STTGALEGANFLATGELVSLSEQQLVDCDHECDPEEEDACDSGCNGGLMNSAFEYTLKAG 231

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETMKKILYKYGPLSVLL 877
           GL  E+DYPY  A  ++  C +DKSK+   +  +F   N    + +   L K GPL++ +
Sbjct: 232 GLMKEQDYPY--AGIDRNTCNFDKSKIAA-SIANFSVVNSIDEDQIAANLVKNGPLAIAI 288

Query: 878 NSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNIP-------YWLVRNSWG 927
           N+  +  Y G    P       CS   L H VLLVGYG     P       YW+++NSWG
Sbjct: 289 NAVFMQTYIGGVSCPF-----ICSKR-LDHGVLLVGYGSAGYAPIRMRDKDYWIIKNSWG 342

Query: 928 PIGPDEGFFKIERGNNACGIEQI 950
               + G++KI RG N CG++ +
Sbjct: 343 ESWGENGYYKICRGRNICGVDSL 365



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 45/323 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY------GTSEFSDRSPEEILCK 343
           F  F  + G+ YA +EE   RF+ FK +  +  +H+ +      G ++FSD +P E   +
Sbjct: 59  FSLFKRRFGKSYATEEEHDRRFKIFKANMRRAERHQSFDPSAIHGVTQFSDLTPFEF--R 116

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F        R+  D      +  E      +P  +DWR+        +Q +CGSCW+F
Sbjct: 117 KAFLGLRGHRLRLPVDTNAAPILPTE-----NLPIDFDWRQHGGVTRVKNQGSCGSCWSF 171

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEYTHQA- 454
           S  G LEG   + TG+LV  S+ QLV+C  +C       C  GC+G  +    EYT +A 
Sbjct: 172 STTGALEGANFLATGELVSLSEQQLVDCDHECDPEEEDACDSGCNGGLMNSAFEYTLKAG 231

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG--SETMKKILYKYGPLSVGL 512
           GL  E+DYPY     ++  C +DKSK+   +  +F   N    + +   L K GPL++ +
Sbjct: 232 GLMKEQDYPY--AGIDRNTCNFDKSKIAA-SIANFSVVNSIDEDQIAANLVKNGPLAIAI 288

Query: 513 NSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLARNSWG 562
           N+  +  Y G    P       CS   L H VLLVGYG       +  D  YW+ +NSWG
Sbjct: 289 NAVFMQTYIGGVSCPF-----ICSKR-LDHGVLLVGYGSAGYAPIRMRDKDYWIIKNSWG 342

Query: 563 PIGPDEGFFKIERGNNACGIEQI 585
               + G++KI RG N CG++ +
Sbjct: 343 ESWGENGYYKICRGRNICGVDSL 365



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 120/231 (51%), Gaps = 31/231 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+        +Q  CGSCW+FS  G LEG   + TG+LV  S+ QLV+C  +C
Sbjct: 144 LPIDFDWRQHGGVTRVKNQGSCGSCWSFSTTGALEGANFLATGELVSLSEQQLVDCDHEC 203

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+DYPY  A  ++  C +DKSK+   + 
Sbjct: 204 DPEEEDACDSGCNGGLMNSAFEYTLKAGGLMKEQDYPY--AGIDRNTCNFDKSKIAA-SI 260

Query: 121 KDFLHFNG--SETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAV 175
            +F   N    + +   L K GPL++ +N+  +  Y G    P       CS   L H V
Sbjct: 261 ANFSVVNSIDEDQIAANLVKNGPLAIAINAVFMQTYIGGVSCPF-----ICSKR-LDHGV 314

Query: 176 LLVGYGKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LLVGYG     P       YW+++NSWG    + G++KI RG N CG++ +
Sbjct: 315 LLVGYGSAGYAPIRMRDKDYWIIKNSWGESWGENGYYKICRGRNICGVDSL 365


>gi|38344381|emb|CAD40319.2| OSJNBb0054B09.3 [Oryza sativa Japonica Group]
 gi|116309071|emb|CAH66180.1| OSIGBa0130O15.4 [Oryza sativa Indica Group]
 gi|116309098|emb|CAH66205.1| OSIGBa0148D14.11 [Oryza sativa Indica Group]
          Length = 381

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 169/340 (49%), Gaps = 50/340 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           F +F  + GR Y +  E   R   F  +  +  +H+R      +G ++FSD +P E   +
Sbjct: 58  FASFERRFGRTYRDAGERAYRMSVFAANLRRARRHQRLDPTATHGVTKFSDLTPGEF--R 115

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F    R     +   E  E  ++    DG +PD +DWR+    GP  DQ +CGSCW+F
Sbjct: 116 DRFLGLRRPSLEGLVGGEPHEAPILPT--DG-LPDDFDWREHGAVGPVKDQGSCGSCWSF 172

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S +G LEG + + TGKL   S+ Q+V+C  +C         SGC+G     +  Y  ++ 
Sbjct: 173 STSGALEGAHFLATGKLEVLSEQQMVDCDHECDASESRACDSGCNGGLMTTAFSYLMKSG 232

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLN 878
           GL+SEKDYPY    G +  C +DKSK+ +   K+F   + +E  +   L K+GPL++ +N
Sbjct: 233 GLQSEKDYPYA---GRENTCKFDKSKI-VAQVKNFSVISVNEDQIAANLVKHGPLAIAIN 288

Query: 879 SDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DNIPYWLVRNSWG 927
           +  +  Y G           P+     L H VLLVGYG            PYW+++NSWG
Sbjct: 289 AAYMQTYIGG-------VSCPFICGRHLDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWG 341

Query: 928 PIGPDEGFFKIERG---NNACGIEQIAGYAT-IDVVKNDE 963
               ++G++KI RG    N CG++ +    T I   K +E
Sbjct: 342 ENWGEKGYYKICRGPHDKNKCGVDSMVSSVTAIHTSKKEE 381



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 163/331 (49%), Gaps = 48/331 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           F +F  + GR Y +  E   R   F  +  +  +H+R      +G ++FSD +P E   +
Sbjct: 58  FASFERRFGRTYRDAGERAYRMSVFAANLRRARRHQRLDPTATHGVTKFSDLTPGEF--R 115

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F    R     +   E  E  ++    DG +PD +DWR+    GP  DQ +CGSCW+F
Sbjct: 116 DRFLGLRRPSLEGLVGGEPHEAPILPT--DG-LPDDFDWREHGAVGPVKDQGSCGSCWSF 172

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC------GGCDGLEQPIEYTH---QA 454
           S +G LEG + + TGKL   S+ Q+V+C  +C          GC+G      +++     
Sbjct: 173 STSGALEGAHFLATGKLEVLSEQQMVDCDHECDASESRACDSGCNGGLMTTAFSYLMKSG 232

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN 513
           GL+SEKDYPY    G +  C +DKSK+ +   K+F   + +E  +   L K+GPL++ +N
Sbjct: 233 GLQSEKDYPY---AGRENTCKFDKSKI-VAQVKNFSVISVNEDQIAANLVKHGPLAIAIN 288

Query: 514 SHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DDIPYWLARNSWG 562
           +  +  Y G           P+     L H VLLVGYG          + PYW+ +NSWG
Sbjct: 289 AAYMQTYIGG-------VSCPFICGRHLDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWG 341

Query: 563 PIGPDEGFFKIERG---NNACGIEQIAGYAT 590
               ++G++KI RG    N CG++ +    T
Sbjct: 342 ENWGEKGYYKICRGPHDKNKCGVDSMVSSVT 372



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 127/239 (53%), Gaps = 36/239 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR+    GP  DQ  CGSCW+FS +G LEG + + TGKL   S+ Q+V+C  +C
Sbjct: 145 LPDDFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHEC 204

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     +  Y  ++ GL+SEKDYPY    G +  C +DKSK+ +   
Sbjct: 205 DASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYA---GRENTCKFDKSKI-VAQV 260

Query: 121 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 175
           K+F   + +E  +   L K+GPL++ +N+  +  Y G           P+     L H V
Sbjct: 261 KNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIGG-------VSCPFICGRHLDHGV 313

Query: 176 LLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 224
           LLVGYG            PYW+++NSWG    ++G++KI RG    N CG++ +    T
Sbjct: 314 LLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVT 372



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 10/64 (15%)

Query: 970  LGHAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIA 1019
            L H VLLVGYG          + PYW+++NSWG    ++G++KI RG    N CG++ + 
Sbjct: 309  LDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMV 368

Query: 1020 GYAT 1023
               T
Sbjct: 369  SSVT 372


>gi|945081|gb|AAC49361.1| P21 [Petunia x hybrida]
          Length = 358

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 145/314 (46%), Gaps = 28/314 (8%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEILC 708
           +F  F  + G++Y + EEIK+RF+ F          +      + G +EFSD        
Sbjct: 58  SFARFARRYGKRYDSVEEIKQRFDIFLDNLEMINSHNDKGLSYKLGVNEFSD-------- 109

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
                W E   +R+ A +         ++ +D  +P+  DWR+  +  P  +Q  CGSCW
Sbjct: 110 ---LTWDEFRRDRLGAAQNCSATTKGNLKLRDAVLPETKDWREAGIVSPVKNQGKCGSCW 166

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESE 824
            FS  G LE  Y  K GK +  S+ QLV+CA   +  GC+G     + EY     GLE+E
Sbjct: 167 TFSTTGALEAAYTQKFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLETE 226

Query: 825 KDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLI 882
           + YPY   NG    C +    V +  T    +     + +K  +    P+SV        
Sbjct: 227 EAYPYTGKNG---LCKFSSQNVGVKVTDSVNITLGAEDELKYAVALVRPVSVAFEVVKGF 283

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y        +   +P D+ HAVL VGYG +  +P+WL++NSWG    D  +FK+E GN
Sbjct: 284 KQYKSGVYTSTECGTTPMDVNHAVLAVGYGVEYGVPFWLIKNSWGADWGDNAYFKMEMGN 343

Query: 943 NACGIEQIAGYATI 956
           + CGI   A Y  +
Sbjct: 344 DMCGIATCASYPVV 357



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 145/319 (45%), Gaps = 37/319 (11%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEILC 342
           +F  F  + G++Y + EEIK+RF+ F          +      + G +EFSD        
Sbjct: 58  SFARFARRYGKRYDSVEEIKQRFDIFLDNLEMINSHNDKGLSYKLGVNEFSD-------- 109

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
                W E   +R+ A +         ++ +D  +P+  DWR+  +  P  +Q  CGSCW
Sbjct: 110 ---LTWDEFRRDRLGAAQNCSATTKGNLKLRDAVLPETKDWREAGIVSPVKNQGKCGSCW 166

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESE 459
            FS  G LE  Y  K GK +  S+ QLV+CA   +  G   GL  Q  EY     GLE+E
Sbjct: 167 TFSTTGALEAAYTQKFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLETE 226

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSV------GL 512
           + YPY   NG    C +    V +  T    +     + +K  +    P+SV      G 
Sbjct: 227 EAYPYTGKNG---LCKFSSQNVGVKVTDSVNITLGAEDELKYAVALVRPVSVAFEVVKGF 283

Query: 513 NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y  T         +P D+ HAVL VGYG +  +P+WL +NSWG    D  +FK
Sbjct: 284 KQYKSGVYTSTEC-----GTTPMDVNHAVLAVGYGVEYGVPFWLIKNSWGADWGDNAYFK 338

Query: 573 IERGNNACGIEQIAGYATI 591
           +E GN+ CGI   A Y  +
Sbjct: 339 MEMGNDMCGIATCASYPVV 357



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 110/224 (49%), Gaps = 8/224 (3%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +D  +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y  K GK +  S+ QLV+C
Sbjct: 137 RDAVLPETKDWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYTQKFGKGISLSEQQLVDC 196

Query: 67  AKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKD 122
           A   +  GC+G     + EY     GLE+E+ YPY   NG    C +    V +  T   
Sbjct: 197 AGAFNNFGCNGGLPSQAFEYIKSNGGLETEEAYPYTGKNG---LCKFSSQNVGVKVTDSV 253

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
            +     + +K  +    P+SV          Y        +   +P D+ HAVL VGYG
Sbjct: 254 NITLGAEDELKYAVALVRPVSVAFEVVKGFKQYKSGVYTSTECGTTPMDVNHAVLAVGYG 313

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +  +P+WL++NSWG    D  +FK+E GN+ CGI   A Y  +
Sbjct: 314 VEYGVPFWLIKNSWGADWGDNAYFKMEMGNDMCGIATCASYPVV 357


>gi|56758090|gb|AAW27185.1| SJCHGC06231 protein [Schistosoma japonicum]
          Length = 372

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 155/324 (47%), Gaps = 28/324 (8%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSD 700
           NI   +K F +   R Y N  E  +RF  F  +  K  E            + G + F+D
Sbjct: 57  NIGAAWKFFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTD 116

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
           ++  E+    G+    R+  RI     K +       +   +PD  DWR+     P  +Q
Sbjct: 117 KTEYELRKLRGY----RSACRIA----KPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQ 168

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH- 817
             CGSCWAFS  G +EGQ+  KT +LV  S+ QL++C+K    +GC+G   + + +Y   
Sbjct: 169 GQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRD 228

Query: 818 QAGLESEKDYPYKNANG-EKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSV 875
             G++SE  YPY + +G E  +C ++ + +    TG   +H      +   +   GP+SV
Sbjct: 229 NKGIDSEISYPYISGDGDENVRCLFNSTNIMAQVTGYINIHEGDERALMNAVATIGPVSV 288

Query: 876 LLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +N+ L     Y        +   +  DL H VLLVGYG +D  PYWL++NSWG    D+
Sbjct: 289 AINAGLPSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDK 348

Query: 934 GFFKIER-GNNACGIEQIAGYATI 956
           G+ KI +   N CG+   A Y  +
Sbjct: 349 GYVKILKDSKNMCGVASAASYPLV 372



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 157/325 (48%), Gaps = 29/325 (8%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSD 334
           NI   +K F +   R Y N  E  +RF  F  +  K  E            + G + F+D
Sbjct: 57  NIGAAWKFFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTD 116

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
           ++  E+    G+    R+  RI     K +       +   +PD  DWR+     P  +Q
Sbjct: 117 KTEYELRKLRGY----RSACRIA----KPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQ 168

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCWAFS  G +EGQ+  KT +LV  S+ QL++C+K   G  GC+G  ++   +Y  
Sbjct: 169 GQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSY-GNNGCEGGLMDLAFQYVR 227

Query: 453 -QAGLESEKDYPYRNGNG-EKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLS 509
              G++SE  YPY +G+G E  +C ++ + +    TG   ++      +   +   GP+S
Sbjct: 228 DNKGIDSEISYPYISGDGDENVRCLFNSTNIMAQVTGYINIHEGDERALMNAVATIGPVS 287

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY--DLGHAVLLVGYGKQDDIPYWLARNSWGPIGPD 567
           V +N+ L  F        +D  C+    DL H VLLVGYG +D  PYWL +NSWG    D
Sbjct: 288 VAINAGLPSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGD 347

Query: 568 EGFFKIER-GNNACGIEQIAGYATI 591
           +G+ KI +   N CG+   A Y  +
Sbjct: 348 KGYVKILKDSKNMCGVASAASYPLV 372



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 119/223 (53%), Gaps = 8/223 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR+     P  +Q  CGSCWAFS  G +EGQ+  KT +LV  S+ QL++C+K  
Sbjct: 150 LPDRVDWRRNGAVTPVKNQGQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSY 209

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-EKFKCAYDKSKVKL-FTGKDFLH 125
             +GC+G   + + +Y     G++SE  YPY + +G E  +C ++ + +    TG   +H
Sbjct: 210 GNNGCEGGLMDLAFQYVRDNKGIDSEISYPYISGDGDENVRCLFNSTNIMAQVTGYINIH 269

Query: 126 FNGSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
                 +   +   GP+SV +N+ L     Y        +   +  DL H VLLVGYG +
Sbjct: 270 EGDERALMNAVATIGPVSVAINAGLPSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIE 329

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           D  PYWL++NSWG    D+G+ KI +   N CG+   A Y  +
Sbjct: 330 DGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCGVASAASYPLV 372



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 18/119 (15%)

Query: 924  NSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKN---------------DETCSPY 968
            NS   +    G+  I  G+    +  +A    + V  N               D  C+  
Sbjct: 254  NSTNIMAQVTGYINIHEGDERALMNAVATIGPVSVAINAGLPSFSMYKSGIYSDPECASA 313

Query: 969  --DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 1024
              DL H VLLVGYG +D  PYWL++NSWG    D+G+ KI +   N CG+   A Y  +
Sbjct: 314  SEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCGVASAASYPLV 372


>gi|343473370|emb|CCD14732.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 153/320 (47%), Gaps = 28/320 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ AC
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPEAVDWRKKGAVTPVKDQGAC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   + S+++   +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTTDYGCRGGLMDKSLQWIVSSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI---LYKYGPLSVLL 877
           + + + YPY +  G+   C  +KS  K+   K   H N  +    I   L K GP+++ +
Sbjct: 208 VFTAQSYPYASGGGKMPPC--NKSG-KVVGAKISGHINLPKDENAIAEWLAKNGPVAIAV 264

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           ++     Y G  +     +C    L H VLLVGY      PYW+++NSW     +EG+ +
Sbjct: 265 DATSFLGYKGGVL----TSCISKGLDHDVLLVGYNDTSKPPYWIIKNSWSKGWGEEGYIR 320

Query: 938 IERGNNACGIEQIAGYATID 957
           IE+G N C ++  A  A + 
Sbjct: 321 IEKGTNQCLMKNYARSAVVS 340



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 144/317 (45%), Gaps = 21/317 (6%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ AC
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPEAVDWRKKGAVTPVKDQGAC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   D   Q I  +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTTDYGCRGGLMDKSLQWIVSSNKGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           + + + YPY +G G+   C      V                + + L K GP+++ +++ 
Sbjct: 208 VFTAQSYPYASGGGKMPPCNKSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVDAT 267

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
               Y G  +     +C    L H VLLVGY      PYW+ +NSW     +EG+ +IE+
Sbjct: 268 SFLGYKGGVL----TSCISKGLDHDVLLVGYNDTSKPPYWIIKNSWSKGWGEEGYIRIEK 323

Query: 576 GNNACGIEQIAGYATID 592
           G N C ++  A  A + 
Sbjct: 324 GTNQCLMKNYARSAVVS 340



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 113/224 (50%), Gaps = 13/224 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P+A DWRKK    P  DQ  CGSCWAFS  G +EGQ+ +   +L   S+  LV C  
Sbjct: 124 GKAPEAVDWRKKGAVTPVKDQGACGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G   + S+++   +++  + + + YPY +  G+   C  +KS  K+   K   H
Sbjct: 184 TDYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPC--NKSG-KVVGAKISGH 240

Query: 126 FNGSETMKKI---LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            N  +    I   L K GP+++ +++     Y G  +     +C    L H VLLVGY  
Sbjct: 241 INLPKDENAIAEWLAKNGPVAIAVDATSFLGYKGGVL----TSCISKGLDHDVLLVGYND 296

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
               PYW+++NSW     +EG+ +IE+G N C ++  A  A + 
Sbjct: 297 TSKPPYWIIKNSWSKGWGEEGYIRIEKGTNQCLMKNYARSAVVS 340


>gi|225706914|gb|ACO09303.1| Cathepsin H precursor [Osmerus mordax]
          Length = 328

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 162/316 (51%), Gaps = 34/316 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEILCK 709
           FK+++++  +QY + EE   R + F        + +G     R G + FSD + +E   +
Sbjct: 30  FKSWMMQHNKQY-DIEEYYHRLQIFIENKMKIERHNGGNHKYRMGLNTFSDMTFDEF--R 86

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
           + F  +E   +   A +         V   G  PD+ DWRKK N      +Q  CGSCW 
Sbjct: 87  SSFLLTEP--QNCSATKGT------HVSSKGLYPDSVDWRKKGNYVTNVKNQGPCGSCWT 138

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGKL++ S+ QLV+CA+  +  GC+G     + EY  +  GL +E 
Sbjct: 139 FSTTGCLESVTAISTGKLLQLSEQQLVDCAQAFNNHGCNGGLPSQAFEYIKYNKGLMTED 198

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI--LYKYGPLSVL--LNSDL 881
           DYPY   +G    C +   +   F  KD ++    + M  +  + +  P+S+   + SD 
Sbjct: 199 DYPYTAQDG---TCKFKPERAAAFV-KDVVNITMYDEMGMVDAVARLNPVSMAYEVTSDF 254

Query: 882 IHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
           +H ++G  +  + E  +  D + HAVL VGY +++  PYW+V+NSWGP    +G+F IER
Sbjct: 255 MHYHSG--VYSSSECHNTTDTVNHAVLAVGYDEENVTPYWIVKNSWGPFWGMKGYFFIER 312

Query: 941 GNNACGIEQIAGYATI 956
           G N CG+   + Y  +
Sbjct: 313 GKNMCGLSACSSYPLV 328



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 159/316 (50%), Gaps = 33/316 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEILCK 343
           FK+++++  +QY + EE   R + F        + +G     R G + FSD + +E   +
Sbjct: 30  FKSWMMQHNKQY-DIEEYYHRLQIFIENKMKIERHNGGNHKYRMGLNTFSDMTFDEF--R 86

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
           + F  +E   +   A +         V   G  PD+ DWRKK N      +Q  CGSCW 
Sbjct: 87  SSFLLTEP--QNCSATKGT------HVSSKGLYPDSVDWRKKGNYVTNVKNQGPCGSCWT 138

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGKL++ S+ QLV+CA+  +  G   GL  Q  EY  +  GL +E 
Sbjct: 139 FSTTGCLESVTAISTGKLLQLSEQQLVDCAQAFNNHGCNGGLPSQAFEYIKYNKGLMTED 198

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKI--LYKYGPLSVG--LNSHL 516
           DYPY   +G    C +   +   F  KD +     + M  +  + +  P+S+   + S  
Sbjct: 199 DYPYTAQDG---TCKFKPERAAAFV-KDVVNITMYDEMGMVDAVARLNPVSMAYEVTSDF 254

Query: 517 IHFYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
           +H+++G  +  + E  +  D + HAVL VGY +++  PYW+ +NSWGP    +G+F IER
Sbjct: 255 MHYHSG--VYSSSECHNTTDTVNHAVLAVGYDEENVTPYWIVKNSWGPFWGMKGYFFIER 312

Query: 576 GNNACGIEQIAGYATI 591
           G N CG+   + Y  +
Sbjct: 313 GKNMCGLSACSSYPLV 328



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/231 (36%), Positives = 126/231 (54%), Gaps = 15/231 (6%)

Query: 4   EVEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
            V   G  PD+ DWRKK N      +Q  CGSCW FS  G LE   AI TGKL++ S+ Q
Sbjct: 104 HVSSKGLYPDSVDWRKKGNYVTNVKNQGPCGSCWTFSTTGCLESVTAISTGKLLQLSEQQ 163

Query: 63  LVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
           LV+CA+  +  GC+G     + EY  +  GL +E DYPY   +G    C +   +   F 
Sbjct: 164 LVDCAQAFNNHGCNGGLPSQAFEYIKYNKGLMTEDDYPYTAQDG---TCKFKPERAAAFV 220

Query: 120 GKDFLHFNGSETMKKI--LYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYD-LGHA 174
            KD ++    + M  +  + +  P+S+   + SD +H ++G  +  + E  +  D + HA
Sbjct: 221 -KDVVNITMYDEMGMVDAVARLNPVSMAYEVTSDFMHYHSG--VYSSSECHNTTDTVNHA 277

Query: 175 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           VL VGY +++  PYW+V+NSWGP    +G+F IERG N CG+   + Y  +
Sbjct: 278 VLAVGYDEENVTPYWIVKNSWGPFWGMKGYFFIERGKNMCGLSACSSYPLV 328



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            + HAVL VGY +++  PYW+V+NSWGP    +G+F IERG N CG+   + Y  +
Sbjct: 274  VNHAVLAVGYDEENVTPYWIVKNSWGPFWGMKGYFFIERGKNMCGLSACSSYPLV 328


>gi|109082090|ref|XP_001108862.1| PREDICTED: cathepsin H isoform 2 [Macaca mulatta]
          Length = 335

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 154/316 (48%), Gaps = 40/316 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVLLNSD--- 880
            YPY+  +G+   C +   K   F  KD  +      E M + +  Y P+S         
Sbjct: 204 TYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 881 LIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           +I+    Y+ T   K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F 
Sbjct: 260 MIYKTGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 314

Query: 938 IERGNNACGIEQIAGY 953
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 153/316 (48%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGL---NSH 515
            YPY+  +G+   C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 204 TYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 516 LIH---FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +I+    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 MIYKTGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 118/226 (52%), Gaps = 21/226 (9%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  
Sbjct: 174 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVA 229

Query: 125 HFN--GSETMKKILYKYGPLSVLLNSD---LIHD---YNGTPIRKNDETCSPYDLGHAVL 176
           +      E M + +  Y P+S         +I+    Y+ T   K     +P  + HAVL
Sbjct: 230 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMIYKTGIYSSTSCHK-----TPDKVNHAVL 284

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
            VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 285 AVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|9631045|ref|NP_047715.1| cathepsin-like proteinase [Lymantria dispar MNPV]
 gi|13124028|sp|Q9YMP9.1|CATV_NPVLD RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|3822313|gb|AAC70264.1| cathepsin-like proteinase [Lymantria dispar MNPV]
          Length = 356

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 160/317 (50%), Gaps = 35/317 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER-----------YGTSEFSDRSPEEI 706
           F++F+    + Y +D E  +R+  FK + H+ + +           Y  ++FSD S  E+
Sbjct: 56  FESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSEL 115

Query: 707 LCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
           + K TG    ER             K ++  +     P  +DWR++N      +Q ACG+
Sbjct: 116 IAKFTGLSIPERV--------SNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGA 167

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESE 824
           CWAF+    +E Q+A++  +L++ S+ QL++C     GC+G     +  E     G+++E
Sbjct: 168 CWAFATLASVESQFAMRHNRLIDLSEQQLIDCDSVDMGCNGGLLHTAFEEIMRMGGVQTE 227

Query: 825 KDYPYKNANGEKFKCAYDKSK---VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SD 880
            DYP+    G   +C  D+ +   V L     ++  N  E +K +L   GP+ + ++ +D
Sbjct: 228 LDYPFV---GRNRRCGLDRHRPYVVSLVGCYRYVMVN-EEKLKDLLRAVGPIPMAIDAAD 283

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
           +++ Y G        +C    L HAVLLVGYG ++ +PYW+ +N+WG    + G+F++ +
Sbjct: 284 IVNYYRGVI-----SSCENNGLNHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQ 338

Query: 941 GNNACG-IEQIAGYATI 956
             NACG +  +A  A +
Sbjct: 339 NVNACGMVNDLASTAVL 355



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 160/319 (50%), Gaps = 38/319 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER-----------YGTSEFSDRSPEEI 340
           F++F+    + Y +D E  +R+  FK + H+ + +           Y  ++FSD S  E+
Sbjct: 56  FESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSEL 115

Query: 341 LCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
           + K TG    ER             K ++  +     P  +DWR++N      +Q ACG+
Sbjct: 116 IAKFTGLSIPERV--------SNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGA 167

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI--EYTHQAGLE 457
           CWAF+    +E Q+A++  +L++ S+ QL++C     GC G  GL      E     G++
Sbjct: 168 CWAFATLASVESQFAMRHNRLIDLSEQQLIDCDSVDMGCNG--GLLHTAFEEIMRMGGVQ 225

Query: 458 SEKDYPYRNGNGEKFKCAYDKSK---VKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN- 513
           +E DYP+    G   +C  D+ +   V L     ++  N  E +K +L   GP+ + ++ 
Sbjct: 226 TELDYPFV---GRNRRCGLDRHRPYVVSLVGCYRYVMVN-EEKLKDLLRAVGPIPMAIDA 281

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           + ++++Y G        +C    L HAVLLVGYG ++ +PYW+ +N+WG    + G+F++
Sbjct: 282 ADIVNYYRGVI-----SSCENNGLNHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRV 336

Query: 574 ERGNNACG-IEQIAGYATI 591
            +  NACG +  +A  A +
Sbjct: 337 RQNVNACGMVNDLASTAVL 355



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 120/220 (54%), Gaps = 15/220 (6%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  +DWR++N      +Q  CG+CWAF+    +E Q+A++  +L++ S+ QL++C     
Sbjct: 145 PLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCDSVDM 204

Query: 72  GCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSK---VKLFTGKDFLHFN 127
           GC+G     + E      G+++E DYP+    G   +C  D+ +   V L     ++  N
Sbjct: 205 GCNGGLLHTAFEEIMRMGGVQTELDYPFV---GRNRRCGLDRHRPYVVSLVGCYRYVMVN 261

Query: 128 GSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
             E +K +L   GP+ + +++ D+++ Y G        +C    L HAVLLVGYG ++ +
Sbjct: 262 -EEKLKDLLRAVGPIPMAIDAADIVNYYRGVI-----SSCENNGLNHAVLLVGYGVENGV 315

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 225
           PYW+ +N+WG    + G+F++ +  NACG +  +A  A +
Sbjct: 316 PYWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLASTAVL 355



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 963  ETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGY 1021
             +C    L HAVLLVGYG ++ +PYW+ +N+WG    + G+F++ +  NACG +  +A  
Sbjct: 293  SSCENNGLNHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLAST 352

Query: 1022 ATI 1024
            A +
Sbjct: 353  AVL 355


>gi|195997891|ref|XP_002108814.1| hypothetical protein TRIADDRAFT_20325 [Trichoplax adhaerens]
 gi|190589590|gb|EDV29612.1| hypothetical protein TRIADDRAFT_20325 [Trichoplax adhaerens]
          Length = 333

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 150/316 (47%), Gaps = 29/316 (9%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK------KHERYGTSEFSDRSPEEI 706
           ++L  FK+FI    R Y   EE + RF+ FK++  +          YG ++F+D + EE 
Sbjct: 31  DLLARFKSFITDYNRNYTTKEEHEFRFQTFKKNFRRIASTNANGATYGVNKFADWTDEE- 89

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWR--KKNVTGPAGDQAACG 764
                FK  E    R V  +E V   L         P + DWR  K+N+ GP  +Q  CG
Sbjct: 90  -----FK--ELLGNRQVPTQEIVNSELHHSLSTAKFPSSLDWREHKRNIVGPVRNQGRCG 142

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT--HQAGLE 822
            CWAFS    +   +A+      E S  QL+ C     GC G  F  +  +   ++  LE
Sbjct: 143 CCWAFSTVETIASAWALAGNSFTELSVQQLLSCDNMDGGCRGGSFYLACNWLTKNRVPLE 202

Query: 823 SEKDYPYKNANGEKFKCAYDKSK----VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
           +E   PY    G++ KC    +     +K FT  +F+ +  S +M   L + GPLS+ ++
Sbjct: 203 TESANPYL---GKRDKCVKHATNTGIILKKFTTSNFI-YQESSSMIAALNQNGPLSIAVD 258

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +    DY G  I+ +   C    L HAV +VGY     +PYW+VRNSWG    D G+  I
Sbjct: 259 ATSWRDYVGGIIQHH---CDGKVLNHAVQVVGYKLDAPVPYWIVRNSWGEDFGDHGYIYI 315

Query: 939 ERGNNACGIEQIAGYA 954
           + G N CGI +  G+ 
Sbjct: 316 KMGKNVCGIAESVGWV 331



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 149/321 (46%), Gaps = 38/321 (11%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK------KHERYGTSEFSDRSPEEI 340
           ++L  FK+FI    R Y   EE + RF+ FK++  +          YG ++F+D + EE 
Sbjct: 31  DLLARFKSFITDYNRNYTTKEEHEFRFQTFKKNFRRIASTNANGATYGVNKFADWTDEE- 89

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWR--KKNVTGPAGDQAACG 398
                FK  E    R V  +E V   L         P + DWR  K+N+ GP  +Q  CG
Sbjct: 90  -----FK--ELLGNRQVPTQEIVNSELHHSLSTAKFPSSLDWREHKRNIVGPVRNQGRCG 142

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG------CDGLEQPIEYTH 452
            CWAFS    +   +A+      E S  QL+ C     GC G      C+ L +     +
Sbjct: 143 CCWAFSTVETIASAWALAGNSFTELSVQQLLSCDNMDGGCRGGSFYLACNWLTK-----N 197

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSK----VKLFTGKDFLYFNGSETMKKILYKYGPL 508
           +  LE+E   PY    G++ KC    +     +K FT  +F+Y   S +M   L + GPL
Sbjct: 198 RVPLETESANPYL---GKRDKCVKHATNTGIILKKFTTSNFIY-QESSSMIAALNQNGPL 253

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           S+ +++     Y G  I+ +   C    L HAV +VGY     +PYW+ RNSWG    D 
Sbjct: 254 SIAVDATSWRDYVGGIIQHH---CDGKVLNHAVQVVGYKLDAPVPYWIVRNSWGEDFGDH 310

Query: 569 GFFKIERGNNACGIEQIAGYA 589
           G+  I+ G N CGI +  G+ 
Sbjct: 311 GYIYIKMGKNVCGIAESVGWV 331



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 110/220 (50%), Gaps = 15/220 (6%)

Query: 12  PDAWDWR--KKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P + DWR  K+N+ GP  +Q  CG CWAFS    +   +A+      E S  QL+ C   
Sbjct: 119 PSSLDWREHKRNIVGPVRNQGRCGCCWAFSTVETIASAWALAGNSFTELSVQQLLSCDNM 178

Query: 70  CSGCDGCFFEPSIEYT--HQAGLESEKDYPYKNANGEKFKCAYDKSK----VKLFTGKDF 123
             GC G  F  +  +   ++  LE+E   PY    G++ KC    +     +K FT  +F
Sbjct: 179 DGGCRGGSFYLACNWLTKNRVPLETESANPYL---GKRDKCVKHATNTGIILKKFTTSNF 235

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           + +  S +M   L + GPLS+ +++    DY G  I+ +   C    L HAV +VGY   
Sbjct: 236 I-YQESSSMIAALNQNGPLSIAVDATSWRDYVGGIIQHH---CDGKVLNHAVQVVGYKLD 291

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 223
             +PYW+VRNSWG    D G+  I+ G N CGI +  G+ 
Sbjct: 292 APVPYWIVRNSWGEDFGDHGYIYIKMGKNVCGIAESVGWV 331



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 33/58 (56%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 1022
            C    L HAV +VGY     +PYW+VRNSWG    D G+  I+ G N CGI +  G+ 
Sbjct: 274  CDGKVLNHAVQVVGYKLDAPVPYWIVRNSWGEDFGDHGYIYIKMGKNVCGIAESVGWV 331


>gi|345798093|ref|XP_536212.3| PREDICTED: pro-cathepsin H [Canis lupus familiaris]
          Length = 350

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 160/315 (50%), Gaps = 36/315 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 343
           FK++ V+  ++Y+++E + +R + F     K + H       + G ++FSD +  EI  K
Sbjct: 49  FKSWAVQHQKKYSSEEYL-QRLQTFVGNWRKINAHNAGNHTFKMGLNQFSDMNFAEI--K 105

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P   DWRKK     P  +Q +CGSCW 
Sbjct: 106 HKYLWSEP--QNCSATKGNY------LRGTGPYPPFVDWRKKGKFVSPVKNQGSCGSCWT 157

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGGCDGLEQPIEYT-HQAGLESE 459
           FS  G LE   AIK+GKL+  ++ QLV+CA+  +  GC G     Q  EY  +  G+  E
Sbjct: 158 FSTTGALESAIAIKSGKLLSLAEQQLVDCAQNFNNHGCQGYGAPLQAFEYIRYNKGIMGE 217

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVG--LNSH 515
             YPY+  +G+   C Y  SK   F  KD   +  N  + M + +  Y P+S    + S 
Sbjct: 218 DSYPYKGQDGD---CKYQPSKAIAFV-KDVANITINDEQAMVEAVALYNPVSFAFEVTSD 273

Query: 516 LIHFYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
            + +  G     +  +C  +P  + HAVL VGYG+Q+ IPYW+ +NSWGP     G+F +
Sbjct: 274 FMMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEQNGIPYWIVKNSWGPQWGMNGYFLM 330

Query: 574 ERGNNACGIEQIAGY 588
           ERG N CG+   A Y
Sbjct: 331 ERGKNMCGLAACASY 345



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 163/316 (51%), Gaps = 39/316 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 709
           FK++ V+  ++Y+++E + +R + F     K + H       + G ++FSD +  EI  K
Sbjct: 49  FKSWAVQHQKKYSSEEYL-QRLQTFVGNWRKINAHNAGNHTFKMGLNQFSDMNFAEI--K 105

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P   DWRKK     P  +Q +CGSCW 
Sbjct: 106 HKYLWSEP--QNCSATKGNY------LRGTGPYPPFVDWRKKGKFVSPVKNQGSCGSCWT 157

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEP--SIEYT-HQAGLES 823
           FS  G LE   AIK+GKL+  ++ QLV+CA+  +  GC G +  P  + EY  +  G+  
Sbjct: 158 FSTTGALESAIAIKSGKLLSLAEQQLVDCAQNFNNHGCQG-YGAPLQAFEYIRYNKGIMG 216

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVL--LNS 879
           E  YPYK  +G+   C Y  SK   F  KD   +  N  + M + +  Y P+S    + S
Sbjct: 217 EDSYPYKGQDGD---CKYQPSKAIAFV-KDVANITINDEQAMVEAVALYNPVSFAFEVTS 272

Query: 880 DLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           D +    G     +  +C  +P  + HAVL VGYG+Q+ IPYW+V+NSWGP     G+F 
Sbjct: 273 DFMMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEQNGIPYWIVKNSWGPQWGMNGYFL 329

Query: 938 IERGNNACGIEQIAGY 953
           +ERG N CG+   A Y
Sbjct: 330 MERGKNMCGLAACASY 345



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 122/226 (53%), Gaps = 20/226 (8%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P   DWRKK     P  +Q  CGSCW FS  G LE   AIK+GKL+  ++ QLV+CA
Sbjct: 128 GPYPPFVDWRKKGKFVSPVKNQGSCGSCWTFSTTGALESAIAIKSGKLLSLAEQQLVDCA 187

Query: 68  KQCS--GCDGCFFEP--SIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           +  +  GC G +  P  + EY  +  G+  E  YPYK  +G+   C Y  SK   F  KD
Sbjct: 188 QNFNNHGCQG-YGAPLQAFEYIRYNKGIMGEDSYPYKGQDGD---CKYQPSKAIAFV-KD 242

Query: 123 F--LHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVL 176
              +  N  + M + +  Y P+S    + SD +    G     +  +C  +P  + HAVL
Sbjct: 243 VANITINDEQAMVEAVALYNPVSFAFEVTSDFMMYRKGI---YSSTSCHKTPDKVNHAVL 299

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
            VGYG+Q+ IPYW+V+NSWGP     G+F +ERG N CG+   A Y
Sbjct: 300 AVGYGEQNGIPYWIVKNSWGPQWGMNGYFLMERGKNMCGLAACASY 345



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+Q+ IPYW+V+NSWGP     G+F +ERG N CG+   A Y
Sbjct: 290  TPDKVNHAVLAVGYGEQNGIPYWIVKNSWGPQWGMNGYFLMERGKNMCGLAACASY 345


>gi|309380130|gb|ADO65978.1| cathepsin L [Eriocheir sinensis]
 gi|309380134|gb|ADO65980.1| cathepsin L [Eriocheir sinensis]
          Length = 325

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 159/325 (48%), Gaps = 39/325 (12%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHERY---------GTSEFSDR 701
            L  ++ F  + G+QY + +E   R   ++Q+    +  +E+Y           ++F D 
Sbjct: 18  TLNEWQQFKARYGKQYRSTKEDSYRQSVYEQNQEFINSHNEQYENGLVSFTLAMNQFGDM 77

Query: 702 SPEEI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
           + EEI     GF          ++  +KV +  M       +PD  DWR K    P  DQ
Sbjct: 78  TTEEINAAMNGF----------LSAGKKVPRGTMYQPLVDELPDTVDWRDKGAVTPVKDQ 127

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH- 817
            ACGSCWAFS  G LEGQ+ + TGKLV  S+  LV+C+ +    GC G   + +  Y   
Sbjct: 128 KACGSCWAFSATGSLEGQHFLSTGKLVSLSEQNLVDCSDKYGNFGCGGGLMDNAFRYIKD 187

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHFNGSE-TMKKILYKYGPLS 874
             G+++E+ YPY+  NG    C ++   V   L +  D  H  GSE  ++K + + GP+S
Sbjct: 188 NNGIDTEESYPYEAKNG---PCRFNSDNVGATLSSYVDIQH--GSEDDLQKAVAEKGPVS 242

Query: 875 VLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           V ++  +   H Y+       DE CS   L H VL VGYG  D+  YWLV+NSW     D
Sbjct: 243 VAIDASTSTFHFYSRGIYY--DEKCSSSFLDHGVLAVGYGTDDSSDYWLVKNSWNETWGD 300

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
            G+ K+ R  NN CGI   A Y  +
Sbjct: 301 SGYIKMSRNRNNNCGIASQASYPVV 325



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 156/325 (48%), Gaps = 38/325 (11%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHERY---------GTSEFSDR 335
            L  ++ F  + G+QY + +E   R   ++Q+    +  +E+Y           ++F D 
Sbjct: 18  TLNEWQQFKARYGKQYRSTKEDSYRQSVYEQNQEFINSHNEQYENGLVSFTLAMNQFGDM 77

Query: 336 SPEEI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
           + EEI     GF          ++  +KV +  M       +PD  DWR K    P  DQ
Sbjct: 78  TTEEINAAMNGF----------LSAGKKVPRGTMYQPLVDELPDTVDWRDKGAVTPVKDQ 127

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGGCDGL-EQPIEYT 451
            ACGSCWAFS  G LEGQ+ + TGKLV  S+  LV+C+ +    GCGG  GL +    Y 
Sbjct: 128 KACGSCWAFSATGSLEGQHFLSTGKLVSLSEQNLVDCSDKYGNFGCGG--GLMDNAFRYI 185

Query: 452 H-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLS 509
               G+++E+ YPY   NG    C ++   V           +GSE  ++K + + GP+S
Sbjct: 186 KDNNGIDTEESYPYEAKNG---PCRFNSDNVGATLSSYVDIQHGSEDDLQKAVAEKGPVS 242

Query: 510 VGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPD 567
           V ++  +   HFY+       DE CS   L H VL VGYG  D   YWL +NSW     D
Sbjct: 243 VAIDASTSTFHFYSRGIYY--DEKCSSSFLDHGVLAVGYGTDDSSDYWLVKNSWNETWGD 300

Query: 568 EGFFKIERG-NNACGIEQIAGYATI 591
            G+ K+ R  NN CGI   A Y  +
Sbjct: 301 SGYIKMSRNRNNNCGIASQASYPVV 325



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/224 (39%), Positives = 119/224 (53%), Gaps = 16/224 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD  DWR K    P  DQ  CGSCWAFS  G LEGQ+ + TGKLV  S+  LV+C+ + 
Sbjct: 109 LPDTVDWRDKGAVTPVKDQKACGSCWAFSATGSLEGQHFLSTGKLVSLSEQNLVDCSDKY 168

Query: 71  S--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLH 125
              GC G   + +  Y     G+++E+ YPY+  NG    C ++   V   L +  D  H
Sbjct: 169 GNFGCGGGLMDNAFRYIKDNNGIDTEESYPYEAKNG---PCRFNSDNVGATLSSYVDIQH 225

Query: 126 FNGSE-TMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
             GSE  ++K + + GP+SV ++  +   H Y+       DE CS   L H VL VGYG 
Sbjct: 226 --GSEDDLQKAVAEKGPVSVAIDASTSTFHFYSRGIYY--DEKCSSSFLDHGVLAVGYGT 281

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            D+  YWLV+NSW     D G+ K+ R  NN CGI   A Y  +
Sbjct: 282 DDSSDYWLVKNSWNETWGDSGYIKMSRNRNNNCGIASQASYPVV 325



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE CS   L H VL VGYG  D   YWLV+NSW     D G+ K+ R  NN CGI   A 
Sbjct: 262  DEKCSSSFLDHGVLAVGYGTDDSSDYWLVKNSWNETWGDSGYIKMSRNRNNNCGIASQAS 321

Query: 1021 YATI 1024
            Y  +
Sbjct: 322  YPVV 325


>gi|194689248|gb|ACF78708.1| unknown [Zea mays]
 gi|414885653|tpg|DAA61667.1| TPA: cysteine protease2 [Zea mays]
          Length = 360

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 146/312 (46%), Gaps = 24/312 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           F  F V+ G+ Y +  E+ +RF  F +               R G + F+D S EE    
Sbjct: 59  FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRA- 117

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           T    ++     +  +       +        +P+  DWR+  +  P  +Q  CGSCW F
Sbjct: 118 TRLGAAQNCSATLTGNHRMRAAAV-------ALPETKDWREDGIVSPVKNQGHCGSCWTF 170

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSIEYT-HQAGLESEKD 826
           S  G LE  Y   TGK +  S+ QL++C  A    GC+G     + EY  +  GL++E+ 
Sbjct: 171 STTGALEAAYTQATGKPISLSEQQLIDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEES 230

Query: 827 YPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           YPY+  NG  KFK   +   VK+    + +     + +K  +    P+SV          
Sbjct: 231 YPYQGVNGICKFK--NENVGVKVLDSVN-ITLGAEDELKDAVGLVRPVSVAFEVITGFRL 287

Query: 886 NGTPIRKNDET-CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
             + +  +D    +P D+ HAVL VGYG +D +PYWL++NSWG    DEG+FK+E G N 
Sbjct: 288 YKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNM 347

Query: 945 CGIEQIAGYATI 956
           CG+   A Y  +
Sbjct: 348 CGVATCASYPIV 359



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 142/312 (45%), Gaps = 23/312 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           F  F V+ G+ Y +  E+ +RF  F +               R G + F+D S EE    
Sbjct: 59  FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRA- 117

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           T    ++     +  +       +        +P+  DWR+  +  P  +Q  CGSCW F
Sbjct: 118 TRLGAAQNCSATLTGNHRMRAAAV-------ALPETKDWREDGIVSPVKNQGHCGSCWTF 170

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKD 461
           S  G LE  Y   TGK +  S+ QL++C    +  G   GL  Q  EY  +  GL++E+ 
Sbjct: 171 STTGALEAAYTQATGKPISLSEQQLIDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEES 230

Query: 462 YPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL-IHF 519
           YPY+  NG  KFK   +   VK+    + +     + +K  +    P+SV          
Sbjct: 231 YPYQGVNGICKFK--NENVGVKVLDSVN-ITLGAEDELKDAVGLVRPVSVAFEVITGFRL 287

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
           Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    DEG+FK+E G N 
Sbjct: 288 YKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNM 347

Query: 580 CGIEQIAGYATI 591
           CG+   A Y  +
Sbjct: 348 CGVATCASYPIV 359



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 116/220 (52%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 68
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK +  S+ QL++C  A 
Sbjct: 143 LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLIDCGFAF 202

Query: 69  QCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHF 126
              GC+G     + EY  +  GL++E+ YPY+  NG  KFK   +   VK+    + +  
Sbjct: 203 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFK--NENVGVKVLDSVN-ITL 259

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDN 185
              + +K  +    P+SV            + +  +D    +P D+ HAVL VGYG +D 
Sbjct: 260 GAEDELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDG 319

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 320 VPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 41/59 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +P D+ HAVL VGYG +D +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 301  TPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359


>gi|13928758|ref|NP_113748.1| cathepsin K precursor [Rattus norvegicus]
 gi|12585195|sp|O35186.1|CATK_RAT RecName: Full=Cathepsin K; Flags: Precursor
 gi|2305208|gb|AAB65743.1| cathepsin K [Rattus norvegicus]
 gi|50927597|gb|AAH78793.1| Cathepsin K [Rattus norvegicus]
 gi|149030667|gb|EDL85704.1| cathepsin K, isoform CRA_a [Rattus norvegicus]
          Length = 329

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 136/265 (51%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG         R+   R      L   E +G VPD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGL--------RVPPSRSFSNDTLYTPEWEGRVPDSIDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS AG LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSENYGCGGGYMTTAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  Q  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQQNGGIDSEDAYPYV---GQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE C   ++ HAVL+VGYG Q    YW+++NSWG    +
Sbjct: 245 VSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYVLLARNKNNACGITNLASFPKM 329



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 136/266 (51%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG         R+   R      L   E +G VPD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGL--------RVPPSRSFSNDTLYTPEWEGRVPDSIDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS AG LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSENYGCGG-GYMTTAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  Q  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQQNGGIDSEDAYPYV---GQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE C   ++ HAVL+VGYG Q    YW+ +NSWG    
Sbjct: 244 PVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYVLLARNKNNACGITNLASFPKM 329



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 123/227 (54%), Gaps = 6/227 (2%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           L   E +G VPD+ D+RKK    P  +Q  CGSCWAFS AG LEGQ   KTGKL+  S  
Sbjct: 106 LYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQ 165

Query: 62  QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFT 119
            LV+C  +  GC G +   + +Y  Q  G++SE  YPY    G+   C Y+ + K     
Sbjct: 166 NLVDCVSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYV---GQDESCMYNATAKAAKCR 222

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
           G   +     + +K+ + + GP+SV +++ L      +     DE C   ++ HAVL+VG
Sbjct: 223 GYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVG 282

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           YG Q    YW+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 283 YGTQKGNKYWIIKNSWGESWGNKGYVLLARNKNNACGITNLASFPKM 329



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C   ++ HAVL+VGYG Q    YW+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARNKNNACGITNLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|402875039|ref|XP_003901328.1| PREDICTED: pro-cathepsin H [Papio anubis]
          Length = 335

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 154/318 (48%), Gaps = 44/318 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVLLNSDLIH 883
            YPY+  +G+   C +   K   F  KD  +      E M + +  Y P+S     ++  
Sbjct: 204 TYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAF--EVTQ 257

Query: 884 D--------YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
           D        Y+ T   K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+
Sbjct: 258 DFMMYKTGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGY 312

Query: 936 FKIERGNNACGIEQIAGY 953
           F IERG N CG+   A Y
Sbjct: 313 FLIERGKNMCGLAACASY 330



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 151/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G+   C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 204 TYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 MMYKTGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 118/228 (51%), Gaps = 25/228 (10%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  
Sbjct: 174 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVA 229

Query: 125 HFN--GSETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHA 174
           +      E M + +  Y P+S     ++  D        Y+ T   K     +P  + HA
Sbjct: 230 NITIYDEEAMVEAVALYNPVSFAF--EVTQDFMMYKTGIYSSTSCHK-----TPDKVNHA 282

Query: 175 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           VL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 283 VLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|27819101|gb|AAO23117.1| cysteine proteinase [Bombyx mori NPV]
          Length = 323

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 168/337 (49%), Gaps = 28/337 (8%)

Query: 632 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 685
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 686 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q++ C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIGCDFVDAG 173

Query: 804 CDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--NGS 860
           C+G     + E      G++ E DYPY+  N     C  + +K  L   KD   +     
Sbjct: 174 CNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYIIVYE 229

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++NIPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 956
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 164/337 (48%), Gaps = 27/337 (8%)

Query: 266 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 319
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 320 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q++ C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIGCDFVDAG 173

Query: 438 CGGCDGLEQPIE-YTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGS 495
           C G   L    E      G++ E DYPY   N     C  + +K  +     + Y     
Sbjct: 174 CNG-GLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKFLVQVKDCYRYIIVYE 229

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           E +K +L   GP+ + +++  I  Y    I+     C    L HAVLLVGYG +++IPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 591
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 119/221 (53%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ Q++ C  
Sbjct: 110 GKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIGCDF 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G     + E      G++ E DYPY+  N     C  + +K  L   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYI 225

Query: 127 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 282 IPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IPYW  +N+WG    ++GFF++++  NACG+  ++A  A 
Sbjct: 262  CFDSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAV 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|218185|dbj|BAA14404.1| oryzain gamma precursor [Oryza sativa Japonica Group]
          Length = 362

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 145/315 (46%), Gaps = 31/315 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           F  F V+ G++Y +  E++ RF  F +               R G + F+D S       
Sbjct: 62  FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMS------- 114

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVE-KDGP-VPDAWDWRKKNVTGPAGDQAACGSCW 767
               W E    R+ A +     +      +D P +P+  DWR+  +  P  DQ  CGSCW
Sbjct: 115 ----WEEFQASRLGAAQNCSATLAGNHRMRDAPALPETKDWREDGIVSPVKDQGHCGSCW 170

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESE 824
            FS  G LE +Y   TG  V  S+ QL +CA + +  GC G     + EY  +  GL++E
Sbjct: 171 PFSTTGSLEARYTQATGPPVSLSEQQLADCATRYNNFGCSGGLPSQAFEYIKYNGGLDTE 230

Query: 825 KDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DL 881
           + YPY   NG    C Y  + + VK+    + +     + +K  +    P+SV     + 
Sbjct: 231 EAYPYTGVNG---ICHYKPENAGVKVLDSVN-ITLVAEDELKNAVGLVRPVSVAFQVING 286

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
              Y       +    SP D+ HAVL VGYG ++ +PYWL++NSWG    D G+F +E G
Sbjct: 287 FRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFTMEMG 346

Query: 942 NNACGIEQIAGYATI 956
            N CGI   A Y  +
Sbjct: 347 KNMCGIATCASYPIV 361



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 143/315 (45%), Gaps = 30/315 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           F  F V+ G++Y +  E++ RF  F +               R G + F+D S       
Sbjct: 62  FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMS------- 114

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVE-KDGP-VPDAWDWRKKNVTGPAGDQAACGSCW 401
               W E    R+ A +     +      +D P +P+  DWR+  +  P  DQ  CGSCW
Sbjct: 115 ----WEEFQASRLGAAQNCSATLAGNHRMRDAPALPETKDWREDGIVSPVKDQGHCGSCW 170

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESE 459
            FS  G LE +Y   TG  V  S+ QL +CA + +  G   GL  Q  EY  +  GL++E
Sbjct: 171 PFSTTGSLEARYTQATGPPVSLSEQQLADCATRYNNFGCSGGLPSQAFEYIKYNGGLDTE 230

Query: 460 KDYPYRNGNGEKFKCAY--DKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS-HL 516
           + YPY   NG    C Y  + + VK+    +       E +K  +    P+SV     + 
Sbjct: 231 EAYPYTGVNG---ICHYKPENAGVKVLDSVNITLVAEDE-LKNAVGLVRPVSVAFQVING 286

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y       +    SP D+ HAVL VGYG ++ +PYWL +NSWG    D G+F +E G
Sbjct: 287 FRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFTMEMG 346

Query: 577 NNACGIEQIAGYATI 591
            N CGI   A Y  +
Sbjct: 347 KNMCGIATCASYPIV 361



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 115/226 (50%), Gaps = 11/226 (4%)

Query: 7   KDGP-VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           +D P +P+  DWR+  +  P  DQ  CGSCW FS  G LE +Y   TG  V  S+ QL +
Sbjct: 140 RDAPALPETKDWREDGIVSPVKDQGHCGSCWPFSTTGSLEARYTQATGPPVSLSEQQLAD 199

Query: 66  CAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTG 120
           CA + +  GC G     + EY  +  GL++E+ YPY   NG    C Y  + + VK+   
Sbjct: 200 CATRYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENAGVKVLDS 256

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
            + +     + +K  +    P+SV     +    Y       +    SP D+ HAVL VG
Sbjct: 257 VN-ITLVAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVG 315

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           YG ++ +PYWL++NSWG    D G+F +E G N CGI   A Y  +
Sbjct: 316 YGVENGVPYWLIKNSWGADWGDNGYFTMEMGKNMCGIATCASYPIV 361



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 39/59 (66%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            SP D+ HAVL VGYG ++ +PYWL++NSWG    D G+F +E G N CGI   A Y  +
Sbjct: 303  SPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFTMEMGKNMCGIATCASYPIV 361


>gi|226468424|emb|CAX69889.1| Temporarily Assigned Gene name [Schistosoma japonicum]
          Length = 454

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 150/318 (47%), Gaps = 27/318 (8%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRS 336
           EN+ E +  F +   +QY ++ + ++RF  FK +  K       ER    YG + +SD +
Sbjct: 151 ENVGEMYAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLT 209

Query: 337 PEEILCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            +E   +T     W   +    ++ R +V          G +P+ +DWRKK       +Q
Sbjct: 210 TDE-FSRTHLTAPWRASSKRNTISPRREV----------GDIPNNFDWRKKGAVTEVKNQ 258

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQA 454
             CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC G              
Sbjct: 259 GMCGSCWAFSTTGNIESQWFRKTGKLLSLSEQQLVDCDNLDDGCNGGLPSNAYESIIRMG 318

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E +YPY   N    KC    + V  +             +   LY +  +SVG+N+
Sbjct: 319 GLMLEDNYPYDAKNE---KCHLKVANVAAYINSSVNLTQDESELAIWLYHHSAISVGMNA 375

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIPYWLARNSWGPIGPDEGFFKI 573
            L+ FY           CS Y L HAVLLVGYG  + + P+W+ +NSWG    ++G+F++
Sbjct: 376 LLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGEKGYFRM 435

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+  CGI   A  A I
Sbjct: 436 YRGDGTCGINTDATSALI 453



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 153/320 (47%), Gaps = 32/320 (10%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRS 702
           EN+ E +  F +   +QY ++ + ++RF  FK +  K       ER    YG + +SD +
Sbjct: 151 ENVGEMYAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLT 209

Query: 703 PEEILCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            +E   +T     W   +    ++ R +V          G +P+ +DWRKK       +Q
Sbjct: 210 TDE-FSRTHLTAPWRASSKRNTISPRREV----------GDIPNNFDWRKKGAVTEVKNQ 258

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---TH 817
             CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC+G    PS  Y     
Sbjct: 259 GMCGSCWAFSTTGNIESQWFRKTGKLLSLSEQQLVDCDNLDDGCNGGL--PSNAYESIIR 316

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             GL  E +YPY   N    KC    + V  +             +   LY +  +SV +
Sbjct: 317 MGGLMLEDNYPYDAKNE---KCHLKVANVAAYINSSVNLTQDESELAIWLYHHSAISVGM 373

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFF 936
           N+ L+  Y           CS Y L HAVLLVGYG  + N P+W+V+NSWG    ++G+F
Sbjct: 374 NALLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGEKGYF 433

Query: 937 KIERGNNACGIEQIAGYATI 956
           ++ RG+  CGI   A  A I
Sbjct: 434 RMYRGDGTCGINTDATSALI 453



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 112/221 (50%), Gaps = 9/221 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P+ +DWRKK       +Q  CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C  
Sbjct: 238 GDIPNNFDWRKKGAVTEVKNQGMCGSCWAFSTTGNIESQWFRKTGKLLSLSEQQLVDCDN 297

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC+G    PS  Y       GL  E +YPY   N    KC    + V  +       
Sbjct: 298 LDDGCNGGL--PSNAYESIIRMGGLMLEDNYPYDAKNE---KCHLKVANVAAYINSSVNL 352

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQD 184
                 +   LY +  +SV +N+ L+  Y           CS Y L HAVLLVGYG  + 
Sbjct: 353 TQDESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSEK 412

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           N P+W+V+NSWG    ++G+F++ RG+  CGI   A  A I
Sbjct: 413 NEPFWIVKNSWGVEWGEKGYFRMYRGDGTCGINTDATSALI 453


>gi|33242880|gb|AAQ01144.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 170/339 (50%), Gaps = 24/339 (7%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 327
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREK-VEKMLMEVE-----KDGPVPDAWD 381
             +     S    + K G    E  ++RI+    K V+K L+  E      +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDNDDNGTLPKSVD 119

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCG 439
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GCG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 440 GCDGLEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKV--KLFTGKDFLYFNGSE 496
           G   ++Q  +Y     GL++E+ YPY   + +   C +D S V   L   KD    N   
Sbjct: 180 G-GLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLIGYKDVKSSN-EH 235

Query: 497 TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD---IP 553
            +K+ +   GP+SV +++    F   +    ++  CS   L H VL+VGYG  +D     
Sbjct: 236 ALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLVVGYGAMNDNSHQA 295

Query: 554 YWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           +W+ +NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 296 FWIVKNSWGPNWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 168/338 (49%), Gaps = 23/338 (6%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 693
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREK-VEKMLMEVE-----KDGPVPDAWD 747
             +     S    + K G    E  ++RI+    K V+K L+  E      +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDNDDNGTLPKSVD 119

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCD 805
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GC 
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 806 GCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHFNGSET 862
           G   + + +Y     GL++E+ YPY   + +   C +D S V   L   KD    N    
Sbjct: 180 GGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLIGYKDVKSSN-EHA 236

Query: 863 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---IPY 919
           +K+ +   GP+SV +++        +    ++  CS   L H VL+VGYG  ++     +
Sbjct: 237 LKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLVVGYGAMNDNSHQAF 296

Query: 920 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 297 WIVKNSWGPNWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 124/229 (54%), Gaps = 12/229 (5%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           + +G +P + DWR  ++     DQ +CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+
Sbjct: 109 DDNGTLPKSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVD 168

Query: 66  CAKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTG 120
           C+K     GC G   + + +Y     GL++E+ YPY   + +   C +D S V   L   
Sbjct: 169 CSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLIGY 226

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
           KD    N    +K+ +   GP+SV +++        +    ++  CS   L H VL+VGY
Sbjct: 227 KDVKSSN-EHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLVVGY 285

Query: 181 GKQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           G  ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 286 GAMNDNSHQAFWIVKNSWGPNWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|391333246|ref|XP_003741030.1| PREDICTED: digestive cysteine proteinase 2-like [Metaseiulus
           occidentalis]
          Length = 327

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/267 (35%), Positives = 131/267 (49%), Gaps = 17/267 (6%)

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           R G S F+D +PEEI   T    S+ T         K      +      + +A DWR+ 
Sbjct: 70  RMGLSRFTDATPEEIRSLTCLNISDST------STGKSNGNSFDTIDITELSEAVDWRQN 123

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  DQ  CGSCWAF+  G +EGQY  KTG+LV  S+  LV+C +   GC+G +F  
Sbjct: 124 GYVTPVKDQGKCGSCWAFAATGAVEGQYFKKTGQLVSLSEQNLVDCDRSSDGCEGGYFYE 183

Query: 812 SIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYK 869
           S EY     G+ +E  Y Y+   G    C +    +    +G+D +     E + K +  
Sbjct: 184 SFEYIRSNGGIATESSYGYEATAG---SCRFTADSIGATVSGRDSVASGDEEALLKAVAS 240

Query: 870 YGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
            GP+SV ++  D    Y+       D  CS     HAVL+VGYG +    YWLV+NSWG 
Sbjct: 241 IGPISVTIDVIDTFRHYSSGVYY--DAECSSSSRNHAVLVVGYGTEAGGDYWLVKNSWGT 298

Query: 929 IGPDEGFFKIER--GNNACGIEQIAGY 953
              ++G+ K+ R  GNN CGI   AGY
Sbjct: 299 SFGEQGYIKMARNKGNN-CGIASEAGY 324



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 114/217 (52%), Gaps = 11/217 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           + +A DWR+     P  DQ  CGSCWAF+  G +EGQY  KTG+LV  S+  LV+C +  
Sbjct: 114 LSEAVDWRQNGYVTPVKDQGKCGSCWAFAATGAVEGQYFKKTGQLVSLSEQNLVDCDRSS 173

Query: 71  SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNG 128
            GC+G +F  S EY     G+ +E  Y Y+   G    C +    +    +G+D +    
Sbjct: 174 DGCEGGYFYESFEYIRSNGGIATESSYGYEATAG---SCRFTADSIGATVSGRDSVASGD 230

Query: 129 SETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
            E + K +   GP+SV ++  D    Y+       D  CS     HAVL+VGYG +    
Sbjct: 231 EEALLKAVASIGPISVTIDVIDTFRHYSSGVYY--DAECSSSSRNHAVLVVGYGTEAGGD 288

Query: 188 YWLVRNSWGPIGPDEGFFKIER--GNNACGIEQIAGY 222
           YWLV+NSWG    ++G+ K+ R  GNN CGI   AGY
Sbjct: 289 YWLVKNSWGTSFGEQGYIKMARNKGNN-CGIASEAGY 324



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 125/268 (46%), Gaps = 18/268 (6%)

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           R G S F+D +PEEI   T    S+ T         K      +      + +A DWR+ 
Sbjct: 70  RMGLSRFTDATPEEIRSLTCLNISDST------STGKSNGNSFDTIDITELSEAVDWRQN 123

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
               P  DQ  CGSCWAF+  G +EGQY  KTG+LV  S+  LV+C +   GC G    E
Sbjct: 124 GYVTPVKDQGKCGSCWAFAATGAVEGQYFKKTGQLVSLSEQNLVDCDRSSDGCEGGYFYE 183

Query: 446 QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSETMKKILYK 504
                    G+ +E  Y Y    G    C +    +    +G+D +     E + K +  
Sbjct: 184 SFEYIRSNGGIATESSYGYEATAG---SCRFTADSIGATVSGRDSVASGDEEALLKAVAS 240

Query: 505 YGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWG 562
            GP+SV ++      H+ +G      D  CS     HAVL+VGYG +    YWL +NSWG
Sbjct: 241 IGPISVTIDVIDTFRHYSSGVYY---DAECSSSSRNHAVLVVGYGTEAGGDYWLVKNSWG 297

Query: 563 PIGPDEGFFKIER--GNNACGIEQIAGY 588
               ++G+ K+ R  GNN CGI   AGY
Sbjct: 298 TSFGEQGYIKMARNKGNN-CGIASEAGY 324



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 13/79 (16%)

Query: 955  TIDVVKN----------DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFF 1004
            TIDV+            D  CS     HAVL+VGYG +    YWLV+NSWG    ++G+ 
Sbjct: 247  TIDVIDTFRHYSSGVYYDAECSSSSRNHAVLVVGYGTEAGGDYWLVKNSWGTSFGEQGYI 306

Query: 1005 KIER--GNNACGIEQIAGY 1021
            K+ R  GNN CGI   AGY
Sbjct: 307  KMARNKGNN-CGIASEAGY 324


>gi|119964630|ref|YP_950826.1| cathepsin [Maruca vitrata MNPV]
 gi|119514473|gb|ABL76048.1| cathepsin [Maruca vitrata MNPV]
          Length = 324

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 162/312 (51%), Gaps = 29/312 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 709
           F+ F+++  + Y ++ E   RF+ F+        ++ +    +Y  ++FSD S +E + K
Sbjct: 28  FEEFVLQFNKNYGSEIEKLRRFKIFQHNLNEIINKNQNDSAAKYEINKFSDLSKDETIAK 87

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
            TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWA
Sbjct: 88  YTGLSLPIQT--------QNFCKVIVLDQPPGKGPFEFDWRRLNKVTNVKNQGVCGACWA 139

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDY 827
           F+    LE Q+A+K  +L++ S+ Q+++C    +GC+G     + E      G++ EKDY
Sbjct: 140 FAALASLESQFAMKHNQLIDLSEQQMIDCDSVDAGCNGGLLHTAFEAVIKMGGVQLEKDY 199

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDY 885
           PY+ AN     C  + +K  L   KD   +     E +K +L   GP+ + +++  I +Y
Sbjct: 200 PYEAANN---NCRMNSNKF-LVKVKDCYRYIIVYEEKLKDLLRSVGPIPMAIDAADIVNY 255

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
               I+     C    L HAVLLVGYG ++NIPYW  +N+WG    + G+F++++  NAC
Sbjct: 256 KQGIIK----YCLNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGESGYFRLQQNINAC 311

Query: 946 GIE-QIAGYATI 956
           G+  ++A  A I
Sbjct: 312 GMRNELASTAVI 323



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 157/312 (50%), Gaps = 28/312 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 343
           F+ F+++  + Y ++ E   RF+ F+        ++ +    +Y  ++FSD S +E + K
Sbjct: 28  FEEFVLQFNKNYGSEIEKLRRFKIFQHNLNEIINKNQNDSAAKYEINKFSDLSKDETIAK 87

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
            TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWA
Sbjct: 88  YTGLSLPIQT--------QNFCKVIVLDQPPGKGPFEFDWRRLNKVTNVKNQGVCGACWA 139

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIE-YTHQAGLESEKD 461
           F+    LE Q+A+K  +L++ S+ Q+++C    +GC G   L    E      G++ EKD
Sbjct: 140 FAALASLESQFAMKHNQLIDLSEQQMIDCDSVDAGCNG-GLLHTAFEAVIKMGGVQLEKD 198

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG-SETMKKILYKYGPLSVGLNSHLIHFY 520
           YPY   N     C  + +K  +     + Y     E +K +L   GP+ + +++  I  Y
Sbjct: 199 YPYEAANN---NCRMNSNKFLVKVKDCYRYIIVYEEKLKDLLRSVGPIPMAIDAADIVNY 255

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
               I+     C    L HAVLLVGYG +++IPYW  +N+WG    + G+F++++  NAC
Sbjct: 256 KQGIIK----YCLNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGESGYFRLQQNINAC 311

Query: 581 GIE-QIAGYATI 591
           G+  ++A  A I
Sbjct: 312 GMRNELASTAVI 323



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 121/221 (54%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+    LE Q+A+K  +L++ S+ Q+++C  
Sbjct: 111 GKGPFEFDWRRLNKVTNVKNQGVCGACWAFAALASLESQFAMKHNQLIDLSEQQMIDCDS 170

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G     + E      G++ EKDYPY+ AN     C  + +K  L   KD   + 
Sbjct: 171 VDAGCNGGLLHTAFEAVIKMGGVQLEKDYPYEAANN---NCRMNSNKF-LVKVKDCYRYI 226

Query: 127 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 227 IVYEEKLKDLLRSVGPIPMAIDAADIVNYKQGIIK----YCLNSGLNHAVLLVGYGVENN 282

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IPYW  +N+WG    + G+F++++  NACG+  ++A  A I
Sbjct: 283 IPYWTFKNTWGTDWGESGYFRLQQNINACGMRNELASTAVI 323



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IPYW  +N+WG    + G+F++++  NACG+  ++A  A 
Sbjct: 263  CLNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGESGYFRLQQNINACGMRNELASTAV 322

Query: 1024 I 1024
            I
Sbjct: 323  I 323


>gi|2351557|gb|AAB68595.1| cathepsin [Choristoneura fumiferana MNPV]
          Length = 324

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 160/304 (52%), Gaps = 28/304 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEILCK 709
           F+ F+    + Y++  E   RF+ F+ +  +           +Y  ++FSD S +E + K
Sbjct: 28  FEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISK 87

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCW 767
            TG           + ++   E +++    D GP+   +DWR+ N      +Q  CG+CW
Sbjct: 88  YTGLSLP-------LQNQNFCEVVVLNRPPDKGPLE--FDWRRLNKVTSVKNQGTCGACW 138

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKD 826
           AF+  G LE Q+AIK  +L+  S+ QL++C     GCDG     + E   +  G+++E D
Sbjct: 139 AFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDMGCDGGLLHTAYEAVMNMGGIQAEND 198

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG-SETMKKILYKYGPLSVLLNSDLIHDY 885
           YPY+  NG+   C  + +K  +   K + +     E +K +L   GP+ V +++  I +Y
Sbjct: 199 YPYEANNGD---CRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNY 255

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                R   + C+ + L HAVLLVGY  Q+ +P+W+++N+WG    ++G+F++++  NAC
Sbjct: 256 K----RGIMKYCANHGLNHAVLLVGYAVQNGVPFWILKNTWGADWGEQGYFRVQQNINAC 311

Query: 946 GIEQ 949
           GI+ 
Sbjct: 312 GIQN 315



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 158/307 (51%), Gaps = 33/307 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEILCK 343
           F+ F+    + Y++  E   RF+ F+ +  +           +Y  ++FSD S +E + K
Sbjct: 28  FEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISK 87

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCW 401
            TG           + ++   E +++    D GP+   +DWR+ N      +Q  CG+CW
Sbjct: 88  YTGLSLP-------LQNQNFCEVVVLNRPPDKGPLE--FDWRRLNKVTSVKNQGTCGACW 138

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI--EYTHQAGLESE 459
           AF+  G LE Q+AIK  +L+  S+ QL++C     GC G  GL         +  G+++E
Sbjct: 139 AFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDMGCDG--GLLHTAYEAVMNMGGIQAE 196

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG-SETMKKILYKYGPLSVGLN-SHLI 517
            DYPY   NG+   C  + +K  +   K + Y     E +K +L   GP+ V ++ S ++
Sbjct: 197 NDYPYEANNGD---CRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIV 253

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
           ++  G       + C+ + L HAVLLVGY  Q+ +P+W+ +N+WG    ++G+F++++  
Sbjct: 254 NYKRGIM-----KYCANHGLNHAVLLVGYAVQNGVPFWILKNTWGADWGEQGYFRVQQNI 308

Query: 578 NACGIEQ 584
           NACGI+ 
Sbjct: 309 NACGIQN 315



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 120/209 (57%), Gaps = 9/209 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  +DWR+ N      +Q  CG+CWAF+  G LE Q+AIK  +L+  S+ QL++C     
Sbjct: 114 PLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDM 173

Query: 72  GCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG-S 129
           GCDG     + E   +  G+++E DYPY+  NG+   C  + +K  +   K + +     
Sbjct: 174 GCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGD---CRANAAKFVVKVKKCYRYITVFE 230

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           E +K +L   GP+ V +++  I +Y     R   + C+ + L HAVLLVGY  Q+ +P+W
Sbjct: 231 EKLKDLLRSVGPIPVAIDASDIVNYK----RGIMKYCANHGLNHAVLLVGYAVQNGVPFW 286

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           +++N+WG    ++G+F++++  NACGI+ 
Sbjct: 287 ILKNTWGADWGEQGYFRVQQNINACGIQN 315



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 40/53 (75%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 1017
            C+ + L HAVLLVGY  Q+ +P+W+++N+WG    ++G+F++++  NACGI+ 
Sbjct: 263  CANHGLNHAVLLVGYAVQNGVPFWILKNTWGADWGEQGYFRVQQNINACGIQN 315


>gi|327358519|gb|AEA51106.1| cathepsin F, partial [Oryzias melastigma]
          Length = 255

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 115/215 (53%), Gaps = 3/215 (1%)

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
           D+WDWR      P  +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +LV+C      
Sbjct: 44  DSWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLLSLSEQELVDCDGLDQA 103

Query: 438 CGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET 497
           C G              GLE+E DY Y    G+K +C +   KV  +           + 
Sbjct: 104 CRGGLPSNAYEAIEKLGGLETETDYSY---TGKKQRCDFTNRKVAAYINSSVELPKDEKE 160

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLA 557
           +   L + GP+SV LN+  + FY           C+P+ + HAVLLVGYG+++ IP+W  
Sbjct: 161 IAAWLAENGPISVALNAFAMQFYKKGVSHPWKIFCNPWMIDHAVLLVGYGERNGIPFWAI 220

Query: 558 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           +NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 221 KNSWGEDYGEQGYYYLHRGSNACGINKMGSSAVVN 255



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 4/215 (1%)

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
           D+WDWR      P  +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +LV+C      
Sbjct: 44  DSWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLLSLSEQELVDCDGLDQA 103

Query: 804 CDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 862
           C G     + E   +  GLE+E DY Y    G+K +C +   KV  +           + 
Sbjct: 104 CRGGLPSNAYEAIEKLGGLETETDYSY---TGKKQRCDFTNRKVAAYINSSVELPKDEKE 160

Query: 863 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 922
           +   L + GP+SV LN+  +  Y           C+P+ + HAVLLVGYG+++ IP+W +
Sbjct: 161 IAAWLAENGPISVALNAFAMQFYKKGVSHPWKIFCNPWMIDHAVLLVGYGERNGIPFWAI 220

Query: 923 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           +NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 221 KNSWGEDYGEQGYYYLHRGSNACGINKMGSSAVVN 255



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 4/215 (1%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           D+WDWR      P  +Q  CGSCWAFS+ G +EGQ+ +K G L+  S+ +LV+C      
Sbjct: 44  DSWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIEGQWFLKNGTLLSLSEQELVDCDGLDQA 103

Query: 73  CDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           C G     + E   +  GLE+E DY Y    G+K +C +   KV  +           + 
Sbjct: 104 CRGGLPSNAYEAIEKLGGLETETDYSY---TGKKQRCDFTNRKVAAYINSSVELPKDEKE 160

Query: 132 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 191
           +   L + GP+SV LN+  +  Y           C+P+ + HAVLLVGYG+++ IP+W +
Sbjct: 161 IAAWLAENGPISVALNAFAMQFYKKGVSHPWKIFCNPWMIDHAVLLVGYGERNGIPFWAI 220

Query: 192 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 221 KNSWGEDYGEQGYYYLHRGSNACGINKMGSSAVVN 255



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 46/61 (75%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P+ + HAVLLVGYG+++ IP+W ++NSWG    ++G++ + RG+NACGI ++   A +
Sbjct: 195  CNPWMIDHAVLLVGYGERNGIPFWAIKNSWGEDYGEQGYYYLHRGSNACGINKMGSSAVV 254

Query: 1025 D 1025
            +
Sbjct: 255  N 255


>gi|297297049|ref|XP_002804951.1| PREDICTED: cathepsin H [Macaca mulatta]
          Length = 323

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 154/316 (48%), Gaps = 40/316 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 23  FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 79

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 80  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 131

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 132 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 191

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVLLNSD--- 880
            YPY+  +G+   C +   K   F  KD  +      E M + +  Y P+S         
Sbjct: 192 TYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 247

Query: 881 LIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           +I+    Y+ T   K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F 
Sbjct: 248 MIYKTGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 302

Query: 938 IERGNNACGIEQIAGY 953
           IERG N CG+   A Y
Sbjct: 303 IERGKNMCGLAACASY 318



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 153/316 (48%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 23  FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 79

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 80  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 131

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 132 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 191

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGL---NSH 515
            YPY+  +G+   C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 192 TYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 247

Query: 516 LIH---FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +I+    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 248 MIYKTGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 302

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 303 IERGKNMCGLAACASY 318



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 118/226 (52%), Gaps = 21/226 (9%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 102 GPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 161

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  
Sbjct: 162 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVA 217

Query: 125 HFN--GSETMKKILYKYGPLSVLLNSD---LIHD---YNGTPIRKNDETCSPYDLGHAVL 176
           +      E M + +  Y P+S         +I+    Y+ T   K     +P  + HAVL
Sbjct: 218 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMIYKTGIYSSTSCHK-----TPDKVNHAVL 272

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
            VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 273 AVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 318



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 263  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 318


>gi|146335576|gb|ABQ23397.1| cathepsin L [Trypanosoma carassii]
          Length = 456

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 144/328 (43%), Gaps = 23/328 (7%)

Query: 651 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRS 702
           N  +   F AF  + G+ Y +  E   R   F++             H ++G ++FSD +
Sbjct: 29  NGGLAAQFAAFKAEHGKSYTSAAEEGYRMRVFEESMKAAQAHAAANPHAKFGVTKFSDLT 88

Query: 703 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
            EE   KT +                 ++    V   G  PD WDWRKK    P  DQ  
Sbjct: 89  HEEF--KTLYA------NGAAHFAAAAKRARRPVSVTGTAPDEWDWRKKGAVTPVKDQGH 140

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQA 819
           CGSCW FS  G +EGQ+A+   +L   S+  LV C  +  GC G   + + E+    +  
Sbjct: 141 CGSCWTFSTTGNIEGQWAVAGNELTNLSEQMLVSCDARDYGCSGGLMDNAFEWIVNQNDG 200

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
            + +E+ YPY + +G+   C     KV           N  E M   L   GP+S+ +++
Sbjct: 201 FVFTEESYPYASGSGDAPLCDVGGRKVGATIKGHVGLPNDEEKMAAWLAANGPISIAVDA 260

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           D    Y G  +      C    L H VLLVGY K  N PYW+++NSWGP   + G+ ++ 
Sbjct: 261 DSFKAYKGGVLTG----CEEGQLDHGVLLVGYNKVANPPYWIIKNSWGPNWGEHGYIRVG 316

Query: 940 RGNNACGIEQIAGYATIDVVKNDETCSP 967
            G N C +   A  A +     + T +P
Sbjct: 317 FGTNQCNLNSYACSAIVGGPIPNTTTAP 344



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 138/317 (43%), Gaps = 22/317 (6%)

Query: 285 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRS 336
           N  +   F AF  + G+ Y +  E   R   F++             H ++G ++FSD +
Sbjct: 29  NGGLAAQFAAFKAEHGKSYTSAAEEGYRMRVFEESMKAAQAHAAANPHAKFGVTKFSDLT 88

Query: 337 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
            EE   KT +                 ++    V   G  PD WDWRKK    P  DQ  
Sbjct: 89  HEEF--KTLYA------NGAAHFAAAAKRARRPVSVTGTAPDEWDWRKKGAVTPVKDQGH 140

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQA 454
           CGSCW FS  G +EGQ+A+   +L   S+  LV C  +  GC G   D   + I   +  
Sbjct: 141 CGSCWTFSTTGNIEGQWAVAGNELTNLSEQMLVSCDARDYGCSGGLMDNAFEWIVNQNDG 200

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
            + +E+ YPY +G+G+   C     KV           N  E M   L   GP+S+ +++
Sbjct: 201 FVFTEESYPYASGSGDAPLCDVGGRKVGATIKGHVGLPNDEEKMAAWLAANGPISIAVDA 260

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
                Y G  +      C    L H VLLVGY K  + PYW+ +NSWGP   + G+ ++ 
Sbjct: 261 DSFKAYKGGVLTG----CEEGQLDHGVLLVGYNKVANPPYWIIKNSWGPNWGEHGYIRVG 316

Query: 575 RGNNACGIEQIAGYATI 591
            G N C +   A  A +
Sbjct: 317 FGTNQCNLNSYACSAIV 333



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 108/224 (48%), Gaps = 7/224 (3%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           V   G  PD WDWRKK    P  DQ  CGSCW FS  G +EGQ+A+   +L   S+  LV
Sbjct: 114 VSVTGTAPDEWDWRKKGAVTPVKDQGHCGSCWTFSTTGNIEGQWAVAGNELTNLSEQMLV 173

Query: 65  ECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 121
            C  +  GC G   + + E+    +   + +E+ YPY + +G+   C     KV      
Sbjct: 174 SCDARDYGCSGGLMDNAFEWIVNQNDGFVFTEESYPYASGSGDAPLCDVGGRKVGATIKG 233

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
                N  E M   L   GP+S+ +++D    Y G  +      C    L H VLLVGY 
Sbjct: 234 HVGLPNDEEKMAAWLAANGPISIAVDADSFKAYKGGVLTG----CEEGQLDHGVLLVGYN 289

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           K  N PYW+++NSWGP   + G+ ++  G N C +   A  A +
Sbjct: 290 KVANPPYWIIKNSWGPNWGEHGYIRVGFGTNQCNLNSYACSAIV 333


>gi|355692920|gb|EHH27523.1| Cathepsin H, partial [Macaca mulatta]
          Length = 305

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 154/318 (48%), Gaps = 44/318 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 5   FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 61

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 62  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 113

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 114 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 173

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVLLNSDLIH 883
            YPY+  +G+   C +   K   F  KD  +      E M + +  Y P+S     ++  
Sbjct: 174 TYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYAEEAMVEAVALYNPVSFAF--EVTQ 227

Query: 884 D--------YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
           D        Y+ T   K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+
Sbjct: 228 DFMMYKTGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGY 282

Query: 936 FKIERGNNACGIEQIAGY 953
           F IERG N CG+   A Y
Sbjct: 283 FLIERGKNMCGLAACASY 300



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 151/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 5   FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 61

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 62  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 113

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 114 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 173

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G+   C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 174 TYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYAEEAMVEAVALYNPVSFAFEVTQDF 229

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 230 MMYKTGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 284

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 285 IERGKNMCGLAACASY 300



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 118/228 (51%), Gaps = 25/228 (10%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 84  GPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 143

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  
Sbjct: 144 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVA 199

Query: 125 HFN--GSETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHA 174
           +      E M + +  Y P+S     ++  D        Y+ T   K     +P  + HA
Sbjct: 200 NITIYAEEAMVEAVALYNPVSFAF--EVTQDFMMYKTGIYSSTSCHK-----TPDKVNHA 252

Query: 175 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           VL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 253 VLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 300



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 245  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 300


>gi|33333700|gb|AAQ11968.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 160/314 (50%), Gaps = 33/314 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 334
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE L     +         V   +  E + ME +      DA DWR++    PA DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNSEDIDMEEK------DAVDWREEGAVTPAKDQ 130

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +  G  GC G  + Q  ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             G+++E+ YPY    G +  C   KS   +   K +++    + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 513 NSHLIHFYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +  + FY+   +   DE C       DL H VL+VGYG ++ + YW+ +NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 569 GFFKIERGNNACGI 582
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 159/314 (50%), Gaps = 34/314 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 700
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE L     +         V   +  E + ME +      DA DWR++    PA DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNSEDIDMEEK------DAVDWREEGAVTPAKDQ 130

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFEPSIEYTH 817
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +    +GC G     + ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             G+++E+ YPY+   G +  C   KS   +   K ++     + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 878 NSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +  +  Y+   +   DE C       DL H VL+VGYG ++ + YW+V+NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 934 GFFKIERGNNACGI 947
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 15/211 (7%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 69
           DA DWR++    PA DQA+CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +   
Sbjct: 114 DAVDWREEGAVTPAKDQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYG 173

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K ++     
Sbjct: 174 NNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDE 228

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDN 185
           + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VGYG ++ 
Sbjct: 229 QEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENG 285

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 286 VDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 35/47 (74%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            DL H VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 270  DLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|343476707|emb|CCD12272.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 149/317 (47%), Gaps = 24/317 (7%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVTVS-TGKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EGQ+ +    L   S+  LV C  +  GC G   + + ++   +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVTGHNLTSLSEQMLVSCDTEDLGCAGGLMDNAFKWIVSSNRHN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNS 879
           + +E+ YPY +  G    C     KV     +D +     E  + + L K GP+++ ++S
Sbjct: 208 VFTEESYPYASKGGNVPPCRMS-GKVVGAKIRDHVDLPKDENAIAEWLAKNGPVAIAVDS 266

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
                Y G  +     +C    L H VLLVGY      PYW+++NSW     +EG+ +IE
Sbjct: 267 TSFQSYTGGVL----TSCISKQLDHGVLLVGYDDTSKPPYWIIKNSWSKGWGEEGYIRIE 322

Query: 940 RGNNACGIEQIAGYATI 956
           +G N C ++  A  A +
Sbjct: 323 KGTNQCLVKNYATSAVV 339



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 147/317 (46%), Gaps = 23/317 (7%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVTVS-TGKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
           GSCWAFS  G +EGQ+ +    L   S+  LV C  +  GC G   D   + I  +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVTGHNLTSLSEQMLVSCDTEDLGCAGGLMDNAFKWIVSSNRHN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS 514
           + +E+ YPY +  G    C     KV     +D +     E  + + L K GP+++ ++S
Sbjct: 208 VFTEESYPYASKGGNVPPCRMS-GKVVGAKIRDHVDLPKDENAIAEWLAKNGPVAIAVDS 266

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
                Y G  +     +C    L H VLLVGY      PYW+ +NSW     +EG+ +IE
Sbjct: 267 TSFQSYTGGVL----TSCISKQLDHGVLLVGYDDTSKPPYWIIKNSWSKGWGEEGYIRIE 322

Query: 575 RGNNACGIEQIAGYATI 591
           +G N C ++  A  A +
Sbjct: 323 KGTNQCLVKNYATSAVV 339



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 9/221 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P+A DWRKK    P  DQ  CGSCWAFS  G +EGQ+ +    L   S+  LV C  
Sbjct: 124 GKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIGNIEGQWKVTGHNLTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
           +  GC G   + + ++   +++  + +E+ YPY +  G    C     KV     +D + 
Sbjct: 184 EDLGCAGGLMDNAFKWIVSSNRHNVFTEESYPYASKGGNVPPCRMS-GKVVGAKIRDHVD 242

Query: 126 FNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
               E  + + L K GP+++ ++S     Y G  +     +C    L H VLLVGY    
Sbjct: 243 LPKDENAIAEWLAKNGPVAIAVDSTSFQSYTGGVL----TSCISKQLDHGVLLVGYDDTS 298

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
             PYW+++NSW     +EG+ +IE+G N C ++  A  A +
Sbjct: 299 KPPYWIIKNSWSKGWGEEGYIRIEKGTNQCLVKNYATSAVV 339


>gi|343471318|emb|CCD16236.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 153/316 (48%), Gaps = 32/316 (10%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 704 EEILCK--TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
           EE       G K+     ER         + ++ V   G  P A DWRKK    P  DQ 
Sbjct: 95  EEFRATYLNGAKYYAAALER--------PRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQG 145

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQ 818
           +CGSCWAF+  G +EGQ+ I   +L   S+  LV C      C G F + + ++   +++
Sbjct: 146 SCGSCWAFAATGNIEGQWKIAGHELTSLSEQMLVSCDTTEDNCRGGFADRAFKWIVSSNK 205

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI---LYKYGPLSV 875
             + +E+ YPY + +G    C  +KS  K+   K   H N  +    I   L + GP+++
Sbjct: 206 GNVFTEESYPYASTDGYVPPC--NKSG-KVVGAKISGHINLPKDENAIAEWLARNGPVAI 262

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
            +++    DY G  +     +CS   L H VLLVGY      PYW+++NSW     +EG+
Sbjct: 263 AVDASTFLDYKGGVL----TSCSSEGLSHDVLLVGYNDTSKPPYWIIKNSWDKEWGEEGY 318

Query: 936 FKIERGNNACGIEQIA 951
            +IE+G N C +++ A
Sbjct: 319 IRIEKGTNLCLMKEYA 334



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 142/313 (45%), Gaps = 25/313 (7%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 338 EEILCK--TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
           EE       G K+     ER         + ++ V   G  P A DWRKK    P  DQ 
Sbjct: 95  EEFRATYLNGAKYYAAALER--------PRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQG 145

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQ 453
           +CGSCWAF+  G +EGQ+ I   +L   S+  LV C      C G   D   + I  +++
Sbjct: 146 SCGSCWAFAATGNIEGQWKIAGHELTSLSEQMLVSCDTTEDNCRGGFADRAFKWIVSSNK 205

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
             + +E+ YPY + +G    C      V                + + L + GP+++ ++
Sbjct: 206 GNVFTEESYPYASTDGYVPPCNKSGKVVGAKISGHINLPKDENAIAEWLARNGPVAIAVD 265

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           +     Y G  +     +CS   L H VLLVGY      PYW+ +NSW     +EG+ +I
Sbjct: 266 ASTFLDYKGGVL----TSCSSEGLSHDVLLVGYNDTSKPPYWIIKNSWDKEWGEEGYIRI 321

Query: 574 ERGNNACGIEQIA 586
           E+G N C +++ A
Sbjct: 322 EKGTNLCLMKEYA 334



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 13/218 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWRKK    P  DQ  CGSCWAF+  G +EGQ+ I   +L   S+  LV C  
Sbjct: 124 GKAPPAVDWRKKGAVTPVKDQGSCGSCWAFAATGNIEGQWKIAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
               C G F + + ++   +++  + +E+ YPY + +G    C  +KS  K+   K   H
Sbjct: 184 TEDNCRGGFADRAFKWIVSSNKGNVFTEESYPYASTDGYVPPC--NKSG-KVVGAKISGH 240

Query: 126 FNGSETMKKI---LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            N  +    I   L + GP+++ +++    DY G  +     +CS   L H VLLVGY  
Sbjct: 241 INLPKDENAIAEWLARNGPVAIAVDASTFLDYKGGVL----TSCSSEGLSHDVLLVGYND 296

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
               PYW+++NSW     +EG+ +IE+G N C +++ A
Sbjct: 297 TSKPPYWIIKNSWDKEWGEEGYIRIEKGTNLCLMKEYA 334


>gi|291410711|ref|XP_002721635.1| PREDICTED: cathepsin H [Oryctolagus cuniculus]
          Length = 333

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 165/333 (49%), Gaps = 39/333 (11%)

Query: 641 LAIEGSLTFDNENILE-TFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-------- 691
           L   G+  F   N+ +  FK+++ +  ++Y+  EE   R + F ++  K +         
Sbjct: 15  LGAPGADAFSANNLEKFHFKSWMSQHHKKYS-AEEYPRRLQTFVRNWRKINAHNNGNHTF 73

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           + G ++FSD S  EI  K  + W+E   +   A +         +   GP P + DWRKK
Sbjct: 74  QMGLNQFSDMSFAEI--KHKYLWTEP--QNCSATKSNY------LRGTGPYPSSVDWRKK 123

Query: 752 -NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCF 808
            N   P  +Q ACGSCW FS  G LE   AI  GK++  ++ QLV+CA+  +  GC+G  
Sbjct: 124 GNFVSPVKNQGACGSCWTFSTTGALESAVAIAGGKMLSLAEQQLVDCAQNFNNHGCEGGL 183

Query: 809 FEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKK 865
              + EY  +  G+  E  YPY+   G   +C +   K   F  KD   +  N  E M +
Sbjct: 184 PSQAFEYILYNKGIMGEDSYPYRAMEG---RCKFQPQKAIAFV-KDVANITLNDEEAMVE 239

Query: 866 ILYKYGPLSVLLNSDLIHDYNGTPIRK---NDETC--SPYDLGHAVLLVGYGKQDNIPYW 920
            +  Y P+S     ++  D+     RK   +  +C  +P  + HAVL VGYG+++ +PYW
Sbjct: 240 AVALYNPVSFAF--EVTEDF--MQYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGVPYW 295

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
           +V+NSWG      G+F IERG N CG+   A Y
Sbjct: 296 IVKNSWGSHWGMNGYFYIERGKNMCGLAACASY 328



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 159/334 (47%), Gaps = 40/334 (11%)

Query: 275 LAIEGSLTFDNENILE-TFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-------- 325
           L   G+  F   N+ +  FK+++ +  ++Y+  EE   R + F ++  K +         
Sbjct: 15  LGAPGADAFSANNLEKFHFKSWMSQHHKKYS-AEEYPRRLQTFVRNWRKINAHNNGNHTF 73

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           + G ++FSD S  EI  K  + W+E   +   A +         +   GP P + DWRKK
Sbjct: 74  QMGLNQFSDMSFAEI--KHKYLWTEP--QNCSATKSNY------LRGTGPYPSSVDWRKK 123

Query: 386 -NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL 444
            N   P  +Q ACGSCW FS  G LE   AI  GK++  ++ QLV+CA+  +  G   GL
Sbjct: 124 GNFVSPVKNQGACGSCWTFSTTGALESAVAIAGGKMLSLAEQQLVDCAQNFNNHGCEGGL 183

Query: 445 -EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKK 500
             Q  EY  +  G+  E  YPYR   G   +C +   K   F  KD   +  N  E M +
Sbjct: 184 PSQAFEYILYNKGIMGEDSYPYRAMEG---RCKFQPQKAIAFV-KDVANITLNDEEAMVE 239

Query: 501 ILYKYGPLSVGLN------SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPY 554
            +  Y P+S           +    Y+ T   K     +P  + HAVL VGYG+++ +PY
Sbjct: 240 AVALYNPVSFAFEVTEDFMQYRKGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGVPY 294

Query: 555 WLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
           W+ +NSWG      G+F IERG N CG+   A Y
Sbjct: 295 WIVKNSWGSHWGMNGYFYIERGKNMCGLAACASY 328



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 19/225 (8%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI  GK++  ++ QLV+CA
Sbjct: 112 GPYPSSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAVAIAGGKMLSLAEQQLVDCA 171

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC+G     + EY  +  G+  E  YPY+   G   +C +   K   F  KD  
Sbjct: 172 QNFNNHGCEGGLPSQAFEYILYNKGIMGEDSYPYRAMEG---RCKFQPQKAIAFV-KDVA 227

Query: 124 -LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK---NDETC--SPYDLGHAVLL 177
            +  N  E M + +  Y P+S     ++  D+     RK   +  +C  +P  + HAVL 
Sbjct: 228 NITLNDEEAMVEAVALYNPVSFAF--EVTEDF--MQYRKGIYSSTSCHKTPDKVNHAVLA 283

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           VGYG+++ +PYW+V+NSWG      G+F IERG N CG+   A Y
Sbjct: 284 VGYGEENGVPYWIVKNSWGSHWGMNGYFYIERGKNMCGLAACASY 328



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 38/56 (67%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ +PYW+V+NSWG      G+F IERG N CG+   A Y
Sbjct: 273  TPDKVNHAVLAVGYGEENGVPYWIVKNSWGSHWGMNGYFYIERGKNMCGLAACASY 328


>gi|4581057|gb|AAD24589.1|AF139913_1 cysteine protease [Trypanosoma congolense]
          Length = 440

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 152/319 (47%), Gaps = 26/319 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPPAIDWRKKGAVTPVKDQGQC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
            S WAFS  G +EGQ+ I   +L   S+  LV C     GC G F +P+ ++   +++  
Sbjct: 148 HSSWAFSAIGNIEGQWKIAGHELTSLSEQMLVSCDTNDFGCGGGFSDPAFKWIVSSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLN 878
           + +E+ YPY +  G    C  DKS KV     +D +     E  + + L K GP+++ ++
Sbjct: 208 VFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDRVDLPRDENAIAEWLAKKGPVAIAVD 265

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +     Y G  +     +C    L H VLLVGY      PYW+++NSWG    +EG+ +I
Sbjct: 266 ATSFQSYTGGVL----TSCISEHLDHGVLLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRI 321

Query: 939 ERGNNACGIEQIAGYATID 957
           E+G N C ++ +   A + 
Sbjct: 322 EKGTNQCLMKNLPSSAVVS 340



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 150/321 (46%), Gaps = 29/321 (9%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPPAIDWRKKGAVTPVKDQGQC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQP----IEYTHQ 453
            S WAFS  G +EGQ+ I   +L   S+  LV C     GCGG  G   P    I  +++
Sbjct: 148 HSSWAFSAIGNIEGQWKIAGHELTSLSEQMLVSCDTNDFGCGG--GFSDPAFKWIVSSNK 205

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVG 511
             + +E+ YPY +G G    C  DKS KV     +D +     E  + + L K GP+++ 
Sbjct: 206 GNVFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDRVDLPRDENAIAEWLAKKGPVAIA 263

Query: 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           +++     Y G  +     +C    L H VLLVGY      PYW+ +NSWG    +EG+ 
Sbjct: 264 VDATSFQSYTGGVL----TSCISEHLDHGVLLVGYDDTSKPPYWIIKNSWGKGWGEEGYI 319

Query: 572 KIERGNNACGIEQIAGYATID 592
           +IE+G N C ++ +   A + 
Sbjct: 320 RIEKGTNQCLMKNLPSSAVVS 340



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 113/223 (50%), Gaps = 11/223 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWRKK    P  DQ  C S WAFS  G +EGQ+ I   +L   S+  LV C  
Sbjct: 124 GKAPPAIDWRKKGAVTPVKDQGQCHSSWAFSAIGNIEGQWKIAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFL 124
              GC G F +P+ ++   +++  + +E+ YPY +  G    C  DKS KV     +D +
Sbjct: 184 NDFGCGGGFSDPAFKWIVSSNKGNVFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDRV 241

Query: 125 HFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
                E  + + L K GP+++ +++     Y G  +     +C    L H VLLVGY   
Sbjct: 242 DLPRDENAIAEWLAKKGPVAIAVDATSFQSYTGGVL----TSCISEHLDHGVLLVGYDDT 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
              PYW+++NSWG    +EG+ +IE+G N C ++ +   A + 
Sbjct: 298 SKPPYWIIKNSWGKGWGEEGYIRIEKGTNQCLMKNLPSSAVVS 340


>gi|302793594|ref|XP_002978562.1| hypothetical protein SELMODRAFT_109056 [Selaginella moellendorffii]
 gi|300153911|gb|EFJ20548.1| hypothetical protein SELMODRAFT_109056 [Selaginella moellendorffii]
          Length = 343

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 151/314 (48%), Gaps = 33/314 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF-----------KQDGHKKHERYGTSEFSDRSPEEI 706
           FK F+ K G+ Y   EE   R + F           KQD    H   G + F+D +PEE+
Sbjct: 46  FKHFMQKFGKVYGTTEEYVHRLKVFQANLVHVMSLKKQDPTAIH---GITSFADLTPEEL 102

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
               GF+       +  ++R   +  L+  +    +P+A+DWR+     P   Q  CGSC
Sbjct: 103 SRFLGFR-------KAYSNRVVNQAPLLPTDN---LPEAFDWREHGAVTPVKFQGRCGSC 152

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKD 826
           W FS  G++EG   +KTGKL+  S+ QL++C  + +GC+G     + EY    GLE+++D
Sbjct: 153 WTFSTTGVVEGANFLKTGKLISLSEEQLIDCDYKDNGCEGGDMLSAYEYVKARGLEADED 212

Query: 827 YPYKNANGEKFK-----CAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           YPY+   G + K     C Y  SKV              + +   L K GPLS+ L  ++
Sbjct: 213 YPYEEL-GYRHKPVRGPCRYQPSKVVATIANYSRVSEDEDQIAANLVKNGPLSIALRGNV 271

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +  Y G         C P ++ H VLLVGYG ++ + YW  +NSW     + G+F++ RG
Sbjct: 272 LFTYEGGV--ACPRIC-PGEINHGVLLVGYGVENGLRYWTFKNSWTDEFGENGYFRLCRG 328

Query: 942 NNACGIEQIAGYAT 955
              C +    G  +
Sbjct: 329 VGVCDMTSEVGTVS 342



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 150/315 (47%), Gaps = 34/315 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF-----------KQDGHKKHERYGTSEFSDRSPEEI 340
           FK F+ K G+ Y   EE   R + F           KQD    H   G + F+D +PEE+
Sbjct: 46  FKHFMQKFGKVYGTTEEYVHRLKVFQANLVHVMSLKKQDPTAIH---GITSFADLTPEEL 102

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
               GF+       +  ++R   +  L+  +    +P+A+DWR+     P   Q  CGSC
Sbjct: 103 SRFLGFR-------KAYSNRVVNQAPLLPTDN---LPEAFDWREHGAVTPVKFQGRCGSC 152

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEK 460
           W FS  G++EG   +KTGKL+  S+ QL++C  + +GC G D L    EY    GLE+++
Sbjct: 153 WTFSTTGVVEGANFLKTGKLISLSEEQLIDCDYKDNGCEGGDML-SAYEYVKARGLEADE 211

Query: 461 DYPYRNGNGEKFK-----CAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           DYPY    G + K     C Y  SKV              + +   L K GPLS+ L  +
Sbjct: 212 DYPYEE-LGYRHKPVRGPCRYQPSKVVATIANYSRVSEDEDQIAANLVKNGPLSIALRGN 270

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
           ++  Y G         C P ++ H VLLVGYG ++ + YW  +NSW     + G+F++ R
Sbjct: 271 VLFTYEGGV--ACPRIC-PGEINHGVLLVGYGVENGLRYWTFKNSWTDEFGENGYFRLCR 327

Query: 576 GNNACGIEQIAGYAT 590
           G   C +    G  +
Sbjct: 328 GVGVCDMTSEVGTVS 342



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 9/219 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+A+DWR+     P   Q  CGSCW FS  G++EG   +KTGKL+  S+ QL++C  + 
Sbjct: 128 LPEAFDWREHGAVTPVKFQGRCGSCWTFSTTGVVEGANFLKTGKLISLSEEQLIDCDYKD 187

Query: 71  SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFK-----CAYDKSKVKLFTGKDFLH 125
           +GC+G     + EY    GLE+++DYPY+   G + K     C Y  SKV          
Sbjct: 188 NGCEGGDMLSAYEYVKARGLEADEDYPYEEL-GYRHKPVRGPCRYQPSKVVATIANYSRV 246

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L K GPLS+ L  +++  Y G         C P ++ H VLLVGYG ++ 
Sbjct: 247 SEDEDQIAANLVKNGPLSIALRGNVLFTYEGGV--ACPRIC-PGEINHGVLLVGYGVENG 303

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           + YW  +NSW     + G+F++ RG   C +    G  +
Sbjct: 304 LRYWTFKNSWTDEFGENGYFRLCRGVGVCDMTSEVGTVS 342



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)

Query: 967  PYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            P ++ H VLLVGYG ++ + YW  +NSW     + G+F++ RG   C +    G  +
Sbjct: 286  PGEINHGVLLVGYGVENGLRYWTFKNSWTDEFGENGYFRLCRGVGVCDMTSEVGTVS 342


>gi|343474734|emb|CCD13687.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 524

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 114 QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 173

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +     +  A   K  + ++ V   G  P A DWRKK    P  DQ +C
Sbjct: 174 EE------FRATYLNGAKYYAAALKRPRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQGSC 226

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAF+  G +EGQ+ I   +L   S+  LV C      C G F + + ++   +++  
Sbjct: 227 GSCWAFAAIGNIEGQWKIAGHELTSLSEQMLVSCDTTEDNCGGGFADRAFKWIVSSNKGN 286

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI---LYKYGPLSVLL 877
           + +E+ YPY + +G    C  +KS  K+   K   H N  +    I   L + GP+++ +
Sbjct: 287 VFTERSYPYASIDGYVPPC--NKSG-KVVGAKISGHINLPKDENAIAEWLARNGPVAIAV 343

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           ++    DY G  +     +CS   + H VLLVGY      PYW+++NSW     +EG+ +
Sbjct: 344 DASTFLDYKGGVL----TSCSSKHVNHEVLLVGYNDTSKPPYWIIKNSWDKEWGEEGYIR 399

Query: 938 IERGNNACGIEQIA 951
           IE+G N C +++ A
Sbjct: 400 IEKGTNLCLMKEYA 413



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 144/311 (46%), Gaps = 21/311 (6%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 114 QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 173

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +     +  A   K  + ++ V   G  P A DWRKK    P  DQ +C
Sbjct: 174 EE------FRATYLNGAKYYAAALKRPRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQGSC 226

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
           GSCWAF+  G +EGQ+ I   +L   S+  LV C      CGG   D   + I  +++  
Sbjct: 227 GSCWAFAAIGNIEGQWKIAGHELTSLSEQMLVSCDTTEDNCGGGFADRAFKWIVSSNKGN 286

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           + +E+ YPY + +G    C      V                + + L + GP+++ +++ 
Sbjct: 287 VFTERSYPYASIDGYVPPCNKSGKVVGAKISGHINLPKDENAIAEWLARNGPVAIAVDAS 346

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
               Y G  +     +CS   + H VLLVGY      PYW+ +NSW     +EG+ +IE+
Sbjct: 347 TFLDYKGGVL----TSCSSKHVNHEVLLVGYNDTSKPPYWIIKNSWDKEWGEEGYIRIEK 402

Query: 576 GNNACGIEQIA 586
           G N C +++ A
Sbjct: 403 GTNLCLMKEYA 413



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 13/218 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWRKK    P  DQ  CGSCWAF+  G +EGQ+ I   +L   S+  LV C  
Sbjct: 203 GKAPPAVDWRKKGAVTPVKDQGSCGSCWAFAAIGNIEGQWKIAGHELTSLSEQMLVSCDT 262

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
               C G F + + ++   +++  + +E+ YPY + +G    C  +KS  K+   K   H
Sbjct: 263 TEDNCGGGFADRAFKWIVSSNKGNVFTERSYPYASIDGYVPPC--NKSG-KVVGAKISGH 319

Query: 126 FNGSETMKKI---LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            N  +    I   L + GP+++ +++    DY G  +     +CS   + H VLLVGY  
Sbjct: 320 INLPKDENAIAEWLARNGPVAIAVDASTFLDYKGGVL----TSCSSKHVNHEVLLVGYND 375

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
               PYW+++NSW     +EG+ +IE+G N C +++ A
Sbjct: 376 TSKPPYWIIKNSWDKEWGEEGYIRIEKGTNLCLMKEYA 413


>gi|356565778|ref|XP_003551114.1| PREDICTED: thiol protease aleurain-like [Glycine max]
          Length = 353

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 147/314 (46%), Gaps = 27/314 (8%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y + +EI+ RF  F       +  +++   Y  G + F+D        
Sbjct: 53  SFARFARRHGKRYRSVDEIRNRFRIFSDNLKLIRSTNRRSLTYTLGVNHFAD-------- 104

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
              + W E T  ++ A +     +       D  +PD  DWRK+ +     DQ  CGSCW
Sbjct: 105 ---WTWEEFTRHKLGAPQNCSATLKGNHRLTDAVLPDEKDWRKEGIVSQVKDQGNCGSCW 161

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESE 459
            FS  G LE  YA   GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GL++E
Sbjct: 162 TFSTTGALEAAYAQAFGKNISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKYNGGLDTE 221

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SHLI 517
           + YPY   +G    C +    V +          G+E  +K+ +    P+SV    +   
Sbjct: 222 EAYPYTGKDG---VCKFTAKNVAVRVIDSINITLGAEDELKQAVAFVRPVSVAFEVAKDF 278

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            FYN           +P D+ HAVL VGYG +D +PYW+ +NSWG    D G+FK+E G 
Sbjct: 279 RFYNNGVYTSTICGSTPMDVNHAVLAVGYGVEDGVPYWIIKNSWGSNWGDNGYFKMELGK 338

Query: 578 NACGIEQIAGYATI 591
           N CG+   A Y  +
Sbjct: 339 NMCGVATCASYPVV 352



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 147/314 (46%), Gaps = 28/314 (8%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y + +EI+ RF  F       +  +++   Y  G + F+D        
Sbjct: 53  SFARFARRHGKRYRSVDEIRNRFRIFSDNLKLIRSTNRRSLTYTLGVNHFAD-------- 104

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
              + W E T  ++ A +     +       D  +PD  DWRK+ +     DQ  CGSCW
Sbjct: 105 ---WTWEEFTRHKLGAPQNCSATLKGNHRLTDAVLPDEKDWRKEGIVSQVKDQGNCGSCW 161

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESE 824
            FS  G LE  YA   GK +  S+ QLV+CA   +  GC+G     + EY  +  GL++E
Sbjct: 162 TFSTTGALEAAYAQAFGKNISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKYNGGLDTE 221

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLN-SDLI 882
           + YPY   +G    C +    V +       +     + +K+ +    P+SV    +   
Sbjct: 222 EAYPYTGKDG---VCKFTAKNVAVRVIDSINITLGAEDELKQAVAFVRPVSVAFEVAKDF 278

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             YN           +P D+ HAVL VGYG +D +PYW+++NSWG    D G+FK+E G 
Sbjct: 279 RFYNNGVYTSTICGSTPMDVNHAVLAVGYGVEDGVPYWIIKNSWGSNWGDNGYFKMELGK 338

Query: 943 NACGIEQIAGYATI 956
           N CG+   A Y  +
Sbjct: 339 NMCGVATCASYPVV 352



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 113/223 (50%), Gaps = 8/223 (3%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +PD  DWRK+ +     DQ +CGSCW FS  G LE  YA   GK +  S+ QLV+CA
Sbjct: 133 DAVLPDEKDWRKEGIVSQVKDQGNCGSCWTFSTTGALEAAYAQAFGKNISLSEQQLVDCA 192

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
              +  GC+G     + EY  +  GL++E+ YPY   +G    C +    V +       
Sbjct: 193 GAFNNFGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG---VCKFTAKNVAVRVIDSIN 249

Query: 124 LHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +     + +K+ +    P+SV    +     YN           +P D+ HAVL VGYG 
Sbjct: 250 ITLGAEDELKQAVAFVRPVSVAFEVAKDFRFYNNGVYTSTICGSTPMDVNHAVLAVGYGV 309

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +D +PYW+++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 310 EDGVPYWIIKNSWGSNWGDNGYFKMELGKNMCGVATCASYPVV 352


>gi|6978721|ref|NP_037071.1| pro-cathepsin H precursor [Rattus norvegicus]
 gi|115729|sp|P00786.1|CATH_RAT RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|55886|emb|CAA68699.1| cathepsin H pre-pro-peptide [Rattus norvegicus]
 gi|55391460|gb|AAH85352.1| Cathepsin H [Rattus norvegicus]
 gi|149018921|gb|EDL77562.1| cathepsin H, isoform CRA_a [Rattus norvegicus]
 gi|226475|prf||1514114A cathepsin H
          Length = 333

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 148/315 (46%), Gaps = 28/315 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           F +++ +  + Y+   E   R + F  +  K           + G ++FSD S  EI  K
Sbjct: 33  FTSWMKQHQKTYS-SREYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEI--K 89

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK NV  P  +Q ACGSCW 
Sbjct: 90  HKYLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWT 141

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI +GK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 142 FSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGED 201

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLN-SDLIH 883
            YPY   NG+   C ++  K   F      +  N    M + +  Y P+S     ++   
Sbjct: 202 SYPYIGKNGQ---CKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFM 258

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
            Y       N    +P  + HAVL VGYG+Q+ + YW+V+NSWG    + G+F IERG N
Sbjct: 259 MYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKN 318

Query: 944 ACGIEQIAGYATIDV 958
            CG+   A Y    V
Sbjct: 319 MCGLAACASYPIPQV 333



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 146/315 (46%), Gaps = 27/315 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           F +++ +  + Y+   E   R + F  +  K           + G ++FSD S  EI  K
Sbjct: 33  FTSWMKQHQKTYS-SREYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEI--K 89

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK NV  P  +Q ACGSCW 
Sbjct: 90  HKYLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWT 141

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI +GK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 142 FSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGED 201

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN-SHLIH 518
            YPY   NG+   C ++  K   F      +  N    M + +  Y P+S     +    
Sbjct: 202 SYPYIGKNGQ---CKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFM 258

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y       N    +P  + HAVL VGYG+Q+ + YW+ +NSWG    + G+F IERG N
Sbjct: 259 MYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKN 318

Query: 579 ACGIEQIAGYATIDV 593
            CG+   A Y    V
Sbjct: 319 MCGLAACASYPIPQV 333



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 114/225 (50%), Gaps = 9/225 (4%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK NV  P  +Q  CGSCW FS  G LE   AI +GK++  ++ QLV+CA
Sbjct: 112 GPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCA 171

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPY   NG+   C ++  K   F      
Sbjct: 172 QNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQ---CKFNPEKAVAFVKNVVN 228

Query: 124 LHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +  N    M + +  Y P+S     ++    Y       N    +P  + HAVL VGYG+
Sbjct: 229 ITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGE 288

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           Q+ + YW+V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 289 QNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLAACASYPIPQV 333



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V +  +C  +P  + HAVL VGYG+Q+ + YW+V+NSWG    + G+F IERG N CG+ 
Sbjct: 264  VYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLA 323

Query: 1017 QIAGYATIDV 1026
              A Y    V
Sbjct: 324  ACASYPIPQV 333


>gi|195455847|ref|XP_002074892.1| GK22908 [Drosophila willistoni]
 gi|194170977|gb|EDW85878.1| GK22908 [Drosophila willistoni]
          Length = 381

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 158/325 (48%), Gaps = 32/325 (9%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYGTS-------EFSD 334
           N ++ F  F+ + G+ YA+  E   R   F+      D        GTS        FSD
Sbjct: 69  NNVQDFGDFLQQTGKTYASAAEQALRQGVFEGSQNLVDSANAAFAAGTSTFTSAVNAFSD 128

Query: 335 RSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 393
            +  E L + TGFK S     R+ A R+ VE   +  E   P+PD++DWR+K    P   
Sbjct: 129 LTHLEFLKQLTGFKKSAEGESRVAAARQAVE---VPAE---PIPDSFDWREKGGVTPVKH 182

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH- 452
           Q  CGSCW F+  G +EG    KT +L   S+  LV+C     G  GCDG  Q   +   
Sbjct: 183 QGTCGSCWTFAATGAIEGHLFRKTNQLPNLSEQNLVDCGPLNFGLNGCDGGCQEYAFAFL 242

Query: 453 ---QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFT-GKDFLYFNGSETMKKILYKYGPL 508
              Q G+ SE  Y Y +   ++  C+Y + + + +  G   +  N  + +KK++   GP+
Sbjct: 243 KEAQRGIASEAKYTYVD---KRDVCSYTEKQAEAYVHGLATVTPNDEDLLKKVVATLGPV 299

Query: 509 SVGL--NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
              L  +  L+H+  G     ++ETC+  +L HAVL+VGYG ++   YW  +NSWG    
Sbjct: 300 GCSLFADEALLHYEKGI---FSNETCNGQELNHAVLVVGYGSENGQDYWTIKNSWGENWG 356

Query: 567 DEGFFKIERGNNACGIEQIAGYATI 591
           + G+F++ RG N CGI     Y  +
Sbjct: 357 ESGYFRLIRGQNFCGISLECSYPIV 381



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 161/325 (49%), Gaps = 33/325 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYGTS-------EFSD 700
           N ++ F  F+ + G+ YA+  E   R   F+      D        GTS        FSD
Sbjct: 69  NNVQDFGDFLQQTGKTYASAAEQALRQGVFEGSQNLVDSANAAFAAGTSTFTSAVNAFSD 128

Query: 701 RSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 759
            +  E L + TGFK S     R+ A R+ VE   +  E   P+PD++DWR+K    P   
Sbjct: 129 LTHLEFLKQLTGFKKSAEGESRVAAARQAVE---VPAE---PIPDSFDWREKGGVTPVKH 182

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK---QCSGCDGCFFEPSIEYT 816
           Q  CGSCW F+  G +EG    KT +L   S+  LV+C       +GCDG   E +  + 
Sbjct: 183 QGTCGSCWTFAATGAIEGHLFRKTNQLPNLSEQNLVDCGPLNFGLNGCDGGCQEYAFAFL 242

Query: 817 HQA--GLESEKDYPYKNANGEKFKCAYDKSKVKLFT-GKDFLHFNGSETMKKILYKYGPL 873
            +A  G+ SE  Y Y +   ++  C+Y + + + +  G   +  N  + +KK++   GP+
Sbjct: 243 KEAQRGIASEAKYTYVD---KRDVCSYTEKQAEAYVHGLATVTPNDEDLLKKVVATLGPV 299

Query: 874 SVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGP 931
              L +D  L+H   G     ++ETC+  +L HAVL+VGYG ++   YW ++NSWG    
Sbjct: 300 GCSLFADEALLHYEKGI---FSNETCNGQELNHAVLVVGYGSENGQDYWTIKNSWGENWG 356

Query: 932 DEGFFKIERGNNACGIEQIAGYATI 956
           + G+F++ RG N CGI     Y  +
Sbjct: 357 ESGYFRLIRGQNFCGISLECSYPIV 381



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 120/224 (53%), Gaps = 14/224 (6%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK- 68
           P+PD++DWR+K    P   Q  CGSCW F+  G +EG    KT +L   S+  LV+C   
Sbjct: 164 PIPDSFDWREKGGVTPVKHQGTCGSCWTFAATGAIEGHLFRKTNQLPNLSEQNLVDCGPL 223

Query: 69  --QCSGCDGCFFEPSIEYTHQA--GLESEKDYPYKNANGEKFKCAYDKSKVKLFT-GKDF 123
               +GCDG   E +  +  +A  G+ SE  Y Y +   ++  C+Y + + + +  G   
Sbjct: 224 NFGLNGCDGGCQEYAFAFLKEAQRGIASEAKYTYVD---KRDVCSYTEKQAEAYVHGLAT 280

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           +  N  + +KK++   GP+   L +D  L+H   G     ++ETC+  +L HAVL+VGYG
Sbjct: 281 VTPNDEDLLKKVVATLGPVGCSLFADEALLHYEKGI---FSNETCNGQELNHAVLVVGYG 337

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            ++   YW ++NSWG    + G+F++ RG N CGI     Y  +
Sbjct: 338 SENGQDYWTIKNSWGENWGESGYFRLIRGQNFCGISLECSYPIV 381


>gi|33333708|gb|AAQ11972.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 159/314 (50%), Gaps = 33/314 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 334
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +  G  GC G  + Q  ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQ 190

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             G+++E+ YPY    G +  C   KS   +   K +++    + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 513 NSHLIHFYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +  + FY+   +   DETC       DL H VL+VGYG ++ + YW+ +NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DETCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 569 GFFKIERGNNACGI 582
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 158/314 (50%), Gaps = 34/314 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 700
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFEPSIEYTH 817
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +    +GC G     + ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQ 190

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             G+++E+ YPY+   G +  C   KS   +   K ++     + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 878 NSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +  +  Y+   +   DETC       DL H VL+VGYG ++ + YW+V+NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DETCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 934 GFFKIERGNNACGI 947
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 15/211 (7%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 69
           DA DWR++    P  DQA+CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +   
Sbjct: 114 DAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYG 173

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K ++     
Sbjct: 174 NNGCRGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDE 228

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDN 185
           + M + +   GP++V + +  +  Y+   +   DETC       DL H VL+VGYG ++ 
Sbjct: 229 QEMARTVAAKGPVAVAIEASQLSFYDKGIV---DETCRCSNKREDLNHGVLVVGYGSENG 285

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 286 VDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 4/58 (6%)

Query: 962  DETC----SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            DETC       DL H VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 259  DETCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|8347420|dbj|BAA96501.1| cysteine protease [Nicotiana tabacum]
          Length = 360

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 151/314 (48%), Gaps = 28/314 (8%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKK---HERYGTSEFSDRSPEEILC 708
           +F  F  + G++Y + EEIK+RFE F  +      H K     + G +EF+D        
Sbjct: 60  SFARFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD-------- 111

Query: 709 KTGFKWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
                W E   +R+ A +      K  ++V  +  +P+  DWR+  +  P  +Q  CGSC
Sbjct: 112 ---LTWDEFRRDRLGAAQNCSATTKGNLKV-TNVVLPETKDWREAGIVSPVKNQGKCGSC 167

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLES 823
           W FS  G LE  Y+   GK +  S+ QLV+CA   +  GC+G     + EY     GL++
Sbjct: 168 WTFSTTGALEAAYSQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDT 227

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLI 882
           E+ YPY   NG   K + +   VK+    + +     + +K  +    P+S+        
Sbjct: 228 EEAYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAEDELKYAVALVRPVSIAFEVIKGF 285

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y        +   +P D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G 
Sbjct: 286 KQYKSGVYTSTECGNTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGK 345

Query: 943 NACGIEQIAGYATI 956
           N CGI   A Y  +
Sbjct: 346 NMCGIATCASYPVV 359



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 151/319 (47%), Gaps = 37/319 (11%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKK---HERYGTSEFSDRSPEEILC 342
           +F  F  + G++Y + EEIK+RFE F  +      H K     + G +EF+D        
Sbjct: 60  SFARFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD-------- 111

Query: 343 KTGFKWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
                W E   +R+ A +      K  ++V  +  +P+  DWR+  +  P  +Q  CGSC
Sbjct: 112 ---LTWDEFRRDRLGAAQNCSATTKGNLKV-TNVVLPETKDWREAGIVSPVKNQGKCGSC 167

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLES 458
           W FS  G LE  Y+   GK +  S+ QLV+CA   +  G   GL  Q  EY     GL++
Sbjct: 168 WTFSTTGALEAAYSQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDT 227

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSV------GL 512
           E+ YPY   NG   K + +   VK+    + +     + +K  +    P+S+      G 
Sbjct: 228 EEAYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAEDELKYAVALVRPVSIAFEVIKGF 285

Query: 513 NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y  T         +P D+ HAVL VGYG ++ +PYWL +NSWG    D G+FK
Sbjct: 286 KQYKSGVYTSTECGN-----TPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFK 340

Query: 573 IERGNNACGIEQIAGYATI 591
           +E G N CGI   A Y  +
Sbjct: 341 MEMGKNMCGIATCASYPVV 359



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 111/219 (50%), Gaps = 6/219 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y+   GK +  S+ QLV+CA   
Sbjct: 143 LPETKDWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYSQAFGKGISLSEQQLVDCAGAF 202

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +  GC+G     + EY     GL++E+ YPY   NG   K + +   VK+    + +   
Sbjct: 203 NNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLG 260

Query: 128 GSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
             + +K  +    P+S+          Y        +   +P D+ HAVL VGYG ++ +
Sbjct: 261 AEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGNTPMDVNHAVLAVGYGVENGV 320

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 321 PYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVV 359


>gi|343477225|emb|CCD11889.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 152/320 (47%), Gaps = 28/320 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ AC
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQGAC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   + S+++   +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTTDYGCRGGLMDKSLQWIVSSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI---LYKYGPLSVLL 877
           + + + YPY +  G+   C  +KS  K+   K   H N  +    I   L K GP+++ +
Sbjct: 208 VFTAQSYPYASGGGKMPPC--NKSG-KVVGAKISGHINLPKDENAIAEWLAKNGPVAIAV 264

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           ++     Y G  +     +C    L H VLLVGY      PYW+++NSW     +EG+ +
Sbjct: 265 DATSFLGYKGGVL----TSCISKGLDHDVLLVGYDDTSKPPYWIIKNSWSKGWGEEGYIR 320

Query: 938 IERGNNACGIEQIAGYATID 957
           IE+G N C ++  A  A + 
Sbjct: 321 IEKGTNQCLMKNYARSAVVS 340



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 143/317 (45%), Gaps = 21/317 (6%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ AC
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQGAC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   D   Q I  +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTTDYGCRGGLMDKSLQWIVSSNKGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           + + + YPY +G G+   C      V                + + L K GP+++ +++ 
Sbjct: 208 VFTAQSYPYASGGGKMPPCNKSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVDAT 267

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
               Y G  +     +C    L H VLLVGY      PYW+ +NSW     +EG+ +IE+
Sbjct: 268 SFLGYKGGVL----TSCISKGLDHDVLLVGYDDTSKPPYWIIKNSWSKGWGEEGYIRIEK 323

Query: 576 GNNACGIEQIAGYATID 592
           G N C ++  A  A + 
Sbjct: 324 GTNQCLMKNYARSAVVS 340



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 112/224 (50%), Gaps = 13/224 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWRKK    P  DQ  CGSCWAFS  G +EGQ+ +   +L   S+  LV C  
Sbjct: 124 GKAPPAVDWRKKGAVTPVKDQGACGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G   + S+++   +++  + + + YPY +  G+   C  +KS  K+   K   H
Sbjct: 184 TDYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPC--NKSG-KVVGAKISGH 240

Query: 126 FNGSETMKKI---LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            N  +    I   L K GP+++ +++     Y G  +     +C    L H VLLVGY  
Sbjct: 241 INLPKDENAIAEWLAKNGPVAIAVDATSFLGYKGGVL----TSCISKGLDHDVLLVGYDD 296

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
               PYW+++NSW     +EG+ +IE+G N C ++  A  A + 
Sbjct: 297 TSKPPYWIIKNSWSKGWGEEGYIRIEKGTNQCLMKNYARSAVVS 340


>gi|15824704|gb|AAL09448.1| cysteine protease [Leishmania donovani]
          Length = 353

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 155/340 (45%), Gaps = 31/340 (9%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 685
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 17  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 76

Query: 686 GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 740
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 77  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 132

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
                 DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C   
Sbjct: 133 ------DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNI 186

Query: 801 CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
             GC+G   E ++++    H   + +E  YPY +A G +  C +D   V           
Sbjct: 187 DDGCNGGLMEQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIAGYMSLP 245

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 917
           +  E +   + K GP++V +++     Y G  +      C    L H VL+VG+ +Q   
Sbjct: 246 HDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAKP 301

Query: 918 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           PYW+V+NSWG    ++G+ ++  G+N C ++  A  ATID
Sbjct: 302 PYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATID 341



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 153/341 (44%), Gaps = 32/341 (9%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 319
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 17  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 76

Query: 320 GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 374
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 77  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 132

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
                 DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C   
Sbjct: 133 ------DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNI 186

Query: 435 CSGCGGCDGLEQPIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY 491
             GC G   +EQ +++    H   + +E  YPY +  G +  C +D   V          
Sbjct: 187 DDGCNG-GLMEQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIAGYMSL 244

Query: 492 FNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
            +  E +   + K GP++V +++     Y G  +      C    L H VL+VG+ +Q  
Sbjct: 245 PHDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAK 300

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
            PYW+ +NSWG    ++G+ ++  G+N C ++  A  ATID
Sbjct: 301 PPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATID 341



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 111/214 (51%), Gaps = 8/214 (3%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C     GC+G
Sbjct: 133 DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNIDDGCNG 192

Query: 76  CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 132
              E ++++    H   + +E  YPY +A G +  C +D   V           +  E +
Sbjct: 193 GLMEQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIAGYMSLPHDEEEI 251

Query: 133 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 192
              + K GP++V +++     Y G  +      C    L H VL+VG+ +Q   PYW+V+
Sbjct: 252 AAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAKPPYWIVK 307

Query: 193 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           NSWG    ++G+ ++  G+N C ++  A  ATID
Sbjct: 308 NSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATID 341



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 38/61 (62%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L H VL+VG+ +Q   PYW+V+NSWG    ++G+ ++  G+N C ++  A  ATI
Sbjct: 281  CFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATI 340

Query: 1025 D 1025
            D
Sbjct: 341  D 341


>gi|66803148|ref|XP_635417.1| cysteine proteinase 1 [Dictyostelium discoideum AX4]
 gi|166201987|sp|P04988.2|CYSP1_DICDI RecName: Full=Cysteine proteinase 1; Flags: Precursor
 gi|60463731|gb|EAL61909.1| cysteine proteinase 1 [Dictyostelium discoideum AX4]
          Length = 343

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 153/330 (46%), Gaps = 45/330 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD------------GHKKHERYGTSEFSDRSPEE 339
           F  F  K  ++Y++ EE  ERFE FK +             HK   ++G ++F+D S +E
Sbjct: 29  FLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87

Query: 340 ILCKTGFK-WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
                 FK +     E I  D   V   L + E    +P A+DWR +    P  +Q  CG
Sbjct: 88  ------FKNYYLNNKEAIFTDDLPVADYLDD-EFINSIPTAFDWRTRGAVTPVKNQGQCG 140

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCG-GCDGLEQPIEYT 451
           SCW+FS  G +EGQ+ I   KLV  S+  LV+C  +C        C  GC+G  QP  Y 
Sbjct: 141 SCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYN 200

Query: 452 H---QAGLESEKDYPYRNGNGEK--FKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYG 506
           +     G+++E  YPY    G +  F  A   +K+  FT    +       M   +   G
Sbjct: 201 YIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFT----MIPKNETVMAGYIVSTG 256

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI-----PYWLARNSW 561
           PL++  ++    FY G      D  C+P  L H +L+VGY  ++ I     PYW+ +NSW
Sbjct: 257 PLAIAADAVEWQFYIGGVF---DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSW 313

Query: 562 GPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           G    ++G+  + RG N CG+      + I
Sbjct: 314 GADWGEQGYIYLRRGKNTCGVSNFVSTSII 343



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 151/330 (45%), Gaps = 46/330 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD------------GHKKHERYGTSEFSDRSPEE 705
           F  F  K  ++Y++ EE  ERFE FK +             HK   ++G ++F+D S +E
Sbjct: 29  FLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87

Query: 706 ILCKTGFK-WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
                 FK +     E I  D   V   L + E    +P A+DWR +    P  +Q  CG
Sbjct: 88  ------FKNYYLNNKEAIFTDDLPVADYLDD-EFINSIPTAFDWRTRGAVTPVKNQGQCG 140

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC----------SGCDGCFFEPSIE 814
           SCW+FS  G +EGQ+ I   KLV  S+  LV+C  +C           GC+G     +  
Sbjct: 141 SCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYN 200

Query: 815 Y-THQAGLESEKDYPYKNANGEK--FKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG 871
           Y     G+++E  YPY    G +  F  A   +K+  FT    +       M   +   G
Sbjct: 201 YIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFT----MIPKNETVMAGYIVSTG 256

Query: 872 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-----NIPYWLVRNSW 926
           PL++  ++     Y G      D  C+P  L H +L+VGY  ++     N+PYW+V+NSW
Sbjct: 257 PLAIAADAVEWQFYIGGVF---DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSW 313

Query: 927 GPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           G    ++G+  + RG N CG+      + I
Sbjct: 314 GADWGEQGYIYLRRGKNTCGVSNFVSTSII 343



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 111/233 (47%), Gaps = 25/233 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P A+DWR +    P  +Q  CGSCW+FS  G +EGQ+ I   KLV  S+  LV+C  +C
Sbjct: 118 IPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHEC 177

Query: 71  ----------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEK--FKCAYDKSKVKL 117
                      GC+G     +  Y     G+++E  YPY    G +  F  A   +K+  
Sbjct: 178 MEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISN 237

Query: 118 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
           FT    +       M   +   GPL++  ++     Y G      D  C+P  L H +L+
Sbjct: 238 FT----MIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVF---DIPCNPNSLDHGILI 290

Query: 178 VGYGKQD-----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           VGY  ++     N+PYW+V+NSWG    ++G+  + RG N CG+      + I
Sbjct: 291 VGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 343



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 5/68 (7%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDI-----PYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            D  C+P  L H +L+VGY  ++ I     PYW+V+NSWG    ++G+  + RG N CG+ 
Sbjct: 276  DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVS 335

Query: 1017 QIAGYATI 1024
                 + I
Sbjct: 336  NFVSTSII 343


>gi|261289811|ref|XP_002611767.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
 gi|229297139|gb|EEN67777.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
          Length = 336

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 168/341 (49%), Gaps = 26/341 (7%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 327
           ++  V T+A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVITMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFTFEKNTIKIAEHN 59

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVA---DREKVEKMLMEVE-----KDGPVPDA 379
             +     S    + K G    E  ++RI+       KV K L+  E      +G +P +
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKVNKPLLGSEVGDNDDNGTLPKS 119

Query: 380 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSG 437
            DWR   +     DQ  CGSCWAFS  G LEGQ+A KTGKLV+ S+ QLV+C+K     G
Sbjct: 120 VDWRNSAMVSEVKDQGECGSCWAFSTTGSLEGQHANKTGKLVDLSEQQLVDCSKDFGNQG 179

Query: 438 CGGCDGLEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKV--KLFTGKDFLYFNG 494
           CGG   ++Q  +Y     GL++E+ YPY   + +   C +D S V   L   KD    N 
Sbjct: 180 CGG-GLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLIGYKDVKSGN- 235

Query: 495 SETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD--- 551
              +K+ +   GP+SV +++    F   +    ++  CS   L H VL+VGYG  +D   
Sbjct: 236 EHALKRAVATVGPISVAIDAGHESFQFYSSGVYDEPQCSSEQLDHGVLVVGYGAMNDNSH 295

Query: 552 IPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
             +W+ +NSWGP   D+G+  + R  +N CGI   A Y  +
Sbjct: 296 QAFWIVKNSWGPNWGDQGYIMMSRNKDNQCGIATSASYPLV 336



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 166/340 (48%), Gaps = 25/340 (7%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 693
           ++  V T+A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVITMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFTFEKNTIKIAEHN 59

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVA---DREKVEKMLMEVE-----KDGPVPDA 745
             +     S    + K G    E  ++RI+       KV K L+  E      +G +P +
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKVNKPLLGSEVGDNDDNGTLPKS 119

Query: 746 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSG 803
            DWR   +     DQ  CGSCWAFS  G LEGQ+A KTGKLV+ S+ QLV+C+K     G
Sbjct: 120 VDWRNSAMVSEVKDQGECGSCWAFSTTGSLEGQHANKTGKLVDLSEQQLVDCSKDFGNQG 179

Query: 804 CDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHFNGS 860
           C G   + + +Y     GL++E+ YPY   + +   C +D S V   L   KD    N  
Sbjct: 180 CGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLIGYKDVKSGN-E 236

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---I 917
             +K+ +   GP+SV +++        +    ++  CS   L H VL+VGYG  ++    
Sbjct: 237 HALKRAVATVGPISVAIDAGHESFQFYSSGVYDEPQCSSEQLDHGVLVVGYGAMNDNSHQ 296

Query: 918 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
            +W+V+NSWGP   D+G+  + R  +N CGI   A Y  +
Sbjct: 297 AFWIVKNSWGPNWGDQGYIMMSRNKDNQCGIATSASYPLV 336



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 123/229 (53%), Gaps = 12/229 (5%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           + +G +P + DWR   +     DQ +CGSCWAFS  G LEGQ+A KTGKLV+ S+ QLV+
Sbjct: 111 DDNGTLPKSVDWRNSAMVSEVKDQGECGSCWAFSTTGSLEGQHANKTGKLVDLSEQQLVD 170

Query: 66  CAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTG 120
           C+K     GC G   + + +Y     GL++E+ YPY   + +   C +D S V   L   
Sbjct: 171 CSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLIGY 228

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
           KD    N    +K+ +   GP+SV +++        +    ++  CS   L H VL+VGY
Sbjct: 229 KDVKSGN-EHALKRAVATVGPISVAIDAGHESFQFYSSGVYDEPQCSSEQLDHGVLVVGY 287

Query: 181 GKQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           G  ++     +W+V+NSWGP   D+G+  + R  +N CGI   A Y  +
Sbjct: 288 GAMNDNSHQAFWIVKNSWGPNWGDQGYIMMSRNKDNQCGIATSASYPLV 336


>gi|156046107|gb|ABU42573.1| cathepsin H variant 2 [Sus scrofa]
          Length = 321

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 156/314 (49%), Gaps = 50/314 (15%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 709
           FK+++V+  ++Y+  EE   R + F     K D H       + G ++FSD S +EI  K
Sbjct: 35  FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKIDAHNAGNHTFKLGLNQFSDMSFDEIRHK 93

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 94  --YLWSEP--QNCSATKGNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDY 827
           FS  G LE   AI TGK++  ++ QLV+CA+            + EY  +  G+  E  Y
Sbjct: 144 FSTTGALESAVAIATGKMLSLAEQQLVDCAQ------------NFEYIRYNKGIMGEDTY 191

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSV---LLNSDLI 882
           PYK   G+   C +   K   F  KD   +  N  E M + +  Y P+S    + N  L+
Sbjct: 192 PYK---GQDDHCKFQPDKAIAFV-KDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLM 247

Query: 883 HD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IE
Sbjct: 248 YRKGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIE 302

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 303 RGKNMCGLAACASY 316



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/315 (34%), Positives = 153/315 (48%), Gaps = 51/315 (16%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 343
           FK+++V+  ++Y+  EE   R + F     K D H       + G ++FSD S +EI  K
Sbjct: 35  FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKIDAHNAGNHTFKLGLNQFSDMSFDEIRHK 93

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 94  --YLWSEP--QNCSATKGNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT-HQAGLESEKD 461
           FS  G LE   AI TGK++  ++ QLV+CA             Q  EY  +  G+  E  
Sbjct: 144 FSTTGALESAVAIATGKMLSLAEQQLVDCA-------------QNFEYIRYNKGIMGEDT 190

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGL---NSHL 516
           YPY+   G+   C +   K   F  KD   +  N  E M + +  Y P+S      N  L
Sbjct: 191 YPYK---GQDDHCKFQPDKAIAFV-KDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFL 246

Query: 517 IH---FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           ++    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F I
Sbjct: 247 MYRKGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLI 301

Query: 574 ERGNNACGIEQIAGY 588
           ERG N CG+   A Y
Sbjct: 302 ERGKNMCGLAACASY 316



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 116/224 (51%), Gaps = 31/224 (13%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--L 124
           +            + EY  +  G+  E  YPYK   G+   C +   K   F  KD   +
Sbjct: 174 Q------------NFEYIRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-KDVANI 217

Query: 125 HFNGSETMKKILYKYGPLSV---LLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLV 178
             N  E M + +  Y P+S    + N  L++    Y+ T   K     +P  + HAVL V
Sbjct: 218 TMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNHAVLAV 272

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 273 GYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 316



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 261  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 316


>gi|33333696|gb|AAQ11966.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 159/314 (50%), Gaps = 33/314 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 334
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +  G  GC G  + Q  ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQ 190

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             G+++E+ YPY    G +  C   KS   +   K +++    + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 513 NSHLIHFYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +  + FY+   +   DETC       DL H VL+VGYG ++ + YW+ +NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DETCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 569 GFFKIERGNNACGI 582
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 158/314 (50%), Gaps = 34/314 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 700
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFEPSIEYTH 817
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +    +GC G     + ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQ 190

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             G+++E+ YPY+   G +  C   KS   +   K ++     + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 878 NSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +  +  Y+   +   DETC       DL H VL+VGYG ++ + YW+V+NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DETCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 934 GFFKIERGNNACGI 947
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 15/211 (7%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 69
           DA DWR++    P  DQA+CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +   
Sbjct: 114 DAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYG 173

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K ++     
Sbjct: 174 NNGCRGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDE 228

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDN 185
           + M + +   GP++V + +  +  Y+   +   DETC       DL H VL+VGYG ++ 
Sbjct: 229 QEMARTVAAKGPVAVAIEASQLSFYDKGIV---DETCRCSNKREDLNHGVLVVGYGSENG 285

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 286 VDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 4/58 (6%)

Query: 962  DETC----SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            DETC       DL H VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 259  DETCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|398014254|ref|XP_003860318.1| cysteine peptidase A (CBA) [Leishmania donovani]
 gi|13518086|gb|AAK27384.1| cysteine proteinase-like protein [Leishmania donovani]
 gi|322498538|emb|CBZ33611.1| cysteine peptidase A (CBA) [Leishmania donovani]
          Length = 354

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 155/340 (45%), Gaps = 31/340 (9%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 685
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 18  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 77

Query: 686 GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 740
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 78  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 133

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
                 DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C   
Sbjct: 134 ------DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNI 187

Query: 801 CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
             GC+G   E ++++    H   + +E  YPY +A G +  C +D   V           
Sbjct: 188 DDGCNGGLMEQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIAGYMSLP 246

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 917
           +  E +   + K GP++V +++     Y G  +      C    L H VL+VG+ +Q   
Sbjct: 247 HDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAKP 302

Query: 918 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           PYW+V+NSWG    ++G+ ++  G+N C ++  A  ATID
Sbjct: 303 PYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATID 342



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 153/341 (44%), Gaps = 32/341 (9%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 319
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 18  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 77

Query: 320 GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 374
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 78  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 133

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
                 DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C   
Sbjct: 134 ------DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNI 187

Query: 435 CSGCGGCDGLEQPIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY 491
             GC G   +EQ +++    H   + +E  YPY +  G +  C +D   V          
Sbjct: 188 DDGCNG-GLMEQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIAGYMSL 245

Query: 492 FNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
            +  E +   + K GP++V +++     Y G  +      C    L H VL+VG+ +Q  
Sbjct: 246 PHDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAK 301

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
            PYW+ +NSWG    ++G+ ++  G+N C ++  A  ATID
Sbjct: 302 PPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATID 342



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 111/214 (51%), Gaps = 8/214 (3%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C     GC+G
Sbjct: 134 DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNIDDGCNG 193

Query: 76  CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 132
              E ++++    H   + +E  YPY +A G +  C +D   V           +  E +
Sbjct: 194 GLMEQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIAGYMSLPHDEEEI 252

Query: 133 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 192
              + K GP++V +++     Y G  +      C    L H VL+VG+ +Q   PYW+V+
Sbjct: 253 AAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAKPPYWIVK 308

Query: 193 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           NSWG    ++G+ ++  G+N C ++  A  ATID
Sbjct: 309 NSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATID 342



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 38/61 (62%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L H VL+VG+ +Q   PYW+V+NSWG    ++G+ ++  G+N C ++  A  ATI
Sbjct: 282  CFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATI 341

Query: 1025 D 1025
            D
Sbjct: 342  D 342


>gi|391328505|ref|XP_003738729.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 323

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 32/311 (10%)

Query: 665 RGRQYANDEEIKERFEYFKQ----DGHK-KHE------RYGTSEFSDRSPEEILCKTGFK 713
            G+ Y +DEE   R  ++K     + H  +H+      R G ++F+D + EE     G K
Sbjct: 26  HGKSYGHDEEHFRRQLFYKSVAKINAHNLRHDLGLTTYRMGLNKFTDMTSEEFRNFKGLK 85

Query: 714 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 773
           +     +R   +  + +K L+       +P   DWR+K    P  +Q  CGSCWAFS  G
Sbjct: 86  FDATKTKR---NGTRFQKELL----GEALPTQVDWREKGYVTPVKNQGQCGSCWAFSTTG 138

Query: 774 MLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYK 830
            LEGQ+   TGKLV  S+  LV+C++    +GC+G   +    Y  Q  G+++E+ YPY 
Sbjct: 139 SLEGQHFKATGKLVSLSEQNLVDCSRVEGNNGCNGGLMDNGFTYIQQNGGIDTEESYPYT 198

Query: 831 NANGEKFKCAYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNS--DLIHDYN 886
             +G+   CA++++ V     K F+         ++  +   GP+SV +++  D    Y 
Sbjct: 199 GKDGD---CAFNENSVGARV-KGFVDVPQRDEAALQAAVASVGPVSVAIDASNDSFQYYK 254

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NAC 945
                 ++ +CS   L H VL+VGYG ++ + YWLV+NSWGP    +G+ K+ R   N C
Sbjct: 255 EGVY--DEPSCSFSQLDHGVLVVGYGTENGVDYWLVKNSWGPTWGQDGYIKMMRNKENQC 312

Query: 946 GIEQIAGYATI 956
           GI  +A Y T+
Sbjct: 313 GIASMASYPTV 323



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 158/310 (50%), Gaps = 29/310 (9%)

Query: 299 RGRQYANDEEIKERFEYFKQ----DGHK-KHE------RYGTSEFSDRSPEEILCKTGFK 347
            G+ Y +DEE   R  ++K     + H  +H+      R G ++F+D + EE     G K
Sbjct: 26  HGKSYGHDEEHFRRQLFYKSVAKINAHNLRHDLGLTTYRMGLNKFTDMTSEEFRNFKGLK 85

Query: 348 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 407
           +     +R   +  + +K L+       +P   DWR+K    P  +Q  CGSCWAFS  G
Sbjct: 86  FDATKTKR---NGTRFQKELL----GEALPTQVDWREKGYVTPVKNQGQCGSCWAFSTTG 138

Query: 408 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQ-AGLESEKDYPY 464
            LEGQ+   TGKLV  S+  LV+C++   G  GC+G  ++    Y  Q  G+++E+ YPY
Sbjct: 139 SLEGQHFKATGKLVSLSEQNLVDCSR-VEGNNGCNGGLMDNGFTYIQQNGGIDTEESYPY 197

Query: 465 RNGNGEKFKCAYDKSKVKLFTGKDFLYF--NGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
              +G+   CA++++ V     K F+         ++  +   GP+SV +++    F   
Sbjct: 198 TGKDGD---CAFNENSVGARV-KGFVDVPQRDEAALQAAVASVGPVSVAIDASNDSFQYY 253

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN-NACG 581
                ++ +CS   L H VL+VGYG ++ + YWL +NSWGP    +G+ K+ R   N CG
Sbjct: 254 KEGVYDEPSCSFSQLDHGVLVVGYGTENGVDYWLVKNSWGPTWGQDGYIKMMRNKENQCG 313

Query: 582 IEQIAGYATI 591
           I  +A Y T+
Sbjct: 314 IASMASYPTV 323



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 122/223 (54%), Gaps = 14/223 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK-- 68
           +P   DWR+K    P  +Q  CGSCWAFS  G LEGQ+   TGKLV  S+  LV+C++  
Sbjct: 107 LPTQVDWREKGYVTPVKNQGQCGSCWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSRVE 166

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   +    Y  Q  G+++E+ YPY   +G+   CA++++ V     K F+   
Sbjct: 167 GNNGCNGGLMDNGFTYIQQNGGIDTEESYPYTGKDGD---CAFNENSVGARV-KGFVDVP 222

Query: 127 -NGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
                 ++  +   GP+SV +++  D    Y       ++ +CS   L H VL+VGYG +
Sbjct: 223 QRDEAALQAAVASVGPVSVAIDASNDSFQYYKEGVY--DEPSCSFSQLDHGVLVVGYGTE 280

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           + + YWLV+NSWGP    +G+ K+ R   N CGI  +A Y T+
Sbjct: 281 NGVDYWLVKNSWGPTWGQDGYIKMMRNKENQCGIASMASYPTV 323



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V ++ +CS   L H VL+VGYG ++ + YWLV+NSWGP    +G+ K+ R   N CGI  
Sbjct: 257  VYDEPSCSFSQLDHGVLVVGYGTENGVDYWLVKNSWGPTWGQDGYIKMMRNKENQCGIAS 316

Query: 1018 IAGYATI 1024
            +A Y T+
Sbjct: 317  MASYPTV 323


>gi|31982433|ref|NP_031828.2| cathepsin K precursor [Mus musculus]
 gi|12644320|sp|P55097.2|CATK_MOUSE RecName: Full=Cathepsin K; Flags: Precursor
 gi|3550487|emb|CAA06825.1| cathepsin K [Mus musculus]
 gi|12834090|dbj|BAB22783.1| unnamed protein product [Mus musculus]
 gi|28277388|gb|AAH46320.1| Cathepsin K [Mus musculus]
 gi|74209960|dbj|BAE21279.1| unnamed protein product [Mus musculus]
 gi|148706870|gb|EDL38817.1| cathepsin K, isoform CRA_a [Mus musculus]
          Length = 329

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 136/265 (51%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG         RI   R      L   E +G VPD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGL--------RIPPSRSYSNDTLYTPEWEGRVPDSIDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS AG LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTENYGCGGGYMTTAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  Q  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQQNGGIDSEDAYPYV---GQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE C   ++ HAVL+VGYG Q    +W+++NSWG    +
Sbjct: 245 ISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYALLARNKNNACGITNMASFPKM 329



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 136/266 (51%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG         RI   R      L   E +G VPD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGL--------RIPPSRSYSNDTLYTPEWEGRVPDSIDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS AG LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTENYGCGG-GYMTTAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  Q  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQQNGGIDSEDAYPYV---GQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE C   ++ HAVL+VGYG Q    +W+ +NSWG    
Sbjct: 244 PISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYALLARNKNNACGITNMASFPKM 329



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 123/227 (54%), Gaps = 6/227 (2%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           L   E +G VPD+ D+RKK    P  +Q  CGSCWAFS AG LEGQ   KTGKL+  S  
Sbjct: 106 LYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQ 165

Query: 62  QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFT 119
            LV+C  +  GC G +   + +Y  Q  G++SE  YPY    G+   C Y+ + K     
Sbjct: 166 NLVDCVTENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYV---GQDESCMYNATAKAAKCR 222

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
           G   +     + +K+ + + GP+SV +++ L      +     DE C   ++ HAVL+VG
Sbjct: 223 GYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVG 282

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           YG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 283 YGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMASFPKM 329



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C   ++ HAVL+VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|1163075|emb|CAA81061.1| cysteine proteinase [Trypanosoma congolense]
          Length = 442

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 152/320 (47%), Gaps = 28/320 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 30  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 89

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ AC
Sbjct: 90  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQGAC 142

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   + S+++   +++  
Sbjct: 143 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTTDYGCRGGLMDKSLQWIVSSNKGN 202

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI---LYKYGPLSVLL 877
           + + + YPY +  G+   C  +KS  K+   K   H N  +    I   L K GP+++ +
Sbjct: 203 VFTAQSYPYASGGGKMPPC--NKSG-KVVGAKISGHINLPKDENAIAEWLAKNGPVAIAV 259

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           ++     Y G  +     +C    L H VLLVGY      PYW+++NSW     +EG+ +
Sbjct: 260 DATSFLGYKGGVL----TSCISKGLDHDVLLVGYDDTSKPPYWIIKNSWSKGWGEEGYIR 315

Query: 938 IERGNNACGIEQIAGYATID 957
           IE+G N C ++  A  A + 
Sbjct: 316 IEKGTNQCLMKNYARSAVVS 335



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 143/317 (45%), Gaps = 21/317 (6%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 30  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 89

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ AC
Sbjct: 90  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQGAC 142

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   D   Q I  +++  
Sbjct: 143 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTTDYGCRGGLMDKSLQWIVSSNKGN 202

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           + + + YPY +G G+   C      V                + + L K GP+++ +++ 
Sbjct: 203 VFTAQSYPYASGGGKMPPCNKSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVDAT 262

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
               Y G  +     +C    L H VLLVGY      PYW+ +NSW     +EG+ +IE+
Sbjct: 263 SFLGYKGGVL----TSCISKGLDHDVLLVGYDDTSKPPYWIIKNSWSKGWGEEGYIRIEK 318

Query: 576 GNNACGIEQIAGYATID 592
           G N C ++  A  A + 
Sbjct: 319 GTNQCLMKNYARSAVVS 335



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 112/224 (50%), Gaps = 13/224 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWRKK    P  DQ  CGSCWAFS  G +EGQ+ +   +L   S+  LV C  
Sbjct: 119 GKAPPAVDWRKKGAVTPVKDQGACGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDT 178

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G   + S+++   +++  + + + YPY +  G+   C  +KS  K+   K   H
Sbjct: 179 TDYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPC--NKSG-KVVGAKISGH 235

Query: 126 FNGSETMKKI---LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            N  +    I   L K GP+++ +++     Y G  +     +C    L H VLLVGY  
Sbjct: 236 INLPKDENAIAEWLAKNGPVAIAVDATSFLGYKGGVL----TSCISKGLDHDVLLVGYDD 291

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
               PYW+++NSW     +EG+ +IE+G N C ++  A  A + 
Sbjct: 292 TSKPPYWIIKNSWSKGWGEEGYIRIEKGTNQCLMKNYARSAVVS 335


>gi|338717354|ref|XP_001492337.3| PREDICTED: pro-cathepsin H-like [Equus caballus]
          Length = 323

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 159/315 (50%), Gaps = 38/315 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++V+  ++Y+  EE   R + F  +  K +         R G ++FS  +  E+  K
Sbjct: 23  FKSWMVQHQKKYS-SEEYHHRLQTFVSNWRKINAHNTGNHTFRMGLNQFSAMNFAEL--K 79

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q  CGSCW 
Sbjct: 80  HKYLWSEP--QNCSATKGNY------LRGAGPYPPSVDWRKKGNFVSPVKNQGGCGSCWT 131

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI +GKL+  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 132 FSTTGALESAVAIASGKLLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 191

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVLLNSDLIH 883
            YPYK  +G+   C +  +K   F  KD   +  N  + M + +  Y P+S     ++  
Sbjct: 192 TYPYKGQDGD---CKFQPNKAIAFV-KDVANITLNDEKAMVEAVALYNPVSFAF--EVTE 245

Query: 884 DYNGTPIRK---NDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           D+     RK   +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F I
Sbjct: 246 DF--MMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPHWGMNGYFLI 303

Query: 939 ERGNNACGIEQIAGY 953
           ERG N CG+   A Y
Sbjct: 304 ERGKNMCGLAACASY 318



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 154/316 (48%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++V+  ++Y+  EE   R + F  +  K +         R G ++FS  +  E+  K
Sbjct: 23  FKSWMVQHQKKYS-SEEYHHRLQTFVSNWRKINAHNTGNHTFRMGLNQFSAMNFAEL--K 79

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q  CGSCW 
Sbjct: 80  HKYLWSEP--QNCSATKGNY------LRGAGPYPPSVDWRKKGNFVSPVKNQGGCGSCWT 131

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI +GKL+  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 132 FSTTGALESAVAIASGKLLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGED 191

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G+   C +  +K   F  KD   +  N  + M + +  Y P+S         
Sbjct: 192 TYPYKGQDGD---CKFQPNKAIAFV-KDVANITLNDEKAMVEAVALYNPVSFAFEVTEDF 247

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 248 MMYRKGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPHWGMNGYFL 302

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 303 IERGKNMCGLAACASY 318



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 122/225 (54%), Gaps = 19/225 (8%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI +GKL+  ++ QLV+CA
Sbjct: 102 GPYPPSVDWRKKGNFVSPVKNQGGCGSCWTFSTTGALESAVAIASGKLLSLAEQQLVDCA 161

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPYK  +G+   C +  +K   F  KD  
Sbjct: 162 QNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDGD---CKFQPNKAIAFV-KDVA 217

Query: 124 -LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK---NDETC--SPYDLGHAVLL 177
            +  N  + M + +  Y P+S     ++  D+     RK   +  +C  +P  + HAVL 
Sbjct: 218 NITLNDEKAMVEAVALYNPVSFAF--EVTEDF--MMYRKGIYSSTSCHKTPDKVNHAVLA 273

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 274 VGYGEENGIPYWIVKNSWGPHWGMNGYFLIERGKNMCGLAACASY 318



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 263  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPHWGMNGYFLIERGKNMCGLAACASY 318


>gi|355778231|gb|EHH63267.1| Cathepsin H, partial [Macaca fascicularis]
          Length = 305

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 154/318 (48%), Gaps = 44/318 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 5   FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 61

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 62  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 113

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 114 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 173

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVLLNSDLIH 883
            YPY+  +G+   C +   K   F  KD  +      E M + +  Y P+S     ++  
Sbjct: 174 TYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAF--EVTQ 227

Query: 884 D--------YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
           D        Y+ T   K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+
Sbjct: 228 DFMMYKTGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGY 282

Query: 936 FKIERGNNACGIEQIAGY 953
           F IERG N CG+   A Y
Sbjct: 283 FLIERGKNMCGLAACASY 300



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 151/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 5   FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 61

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 62  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 113

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 114 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 173

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G+   C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 174 TYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 229

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 230 MMYKTGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 284

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 285 IERGKNMCGLAACASY 300



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 118/228 (51%), Gaps = 25/228 (10%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 84  GPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 143

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  
Sbjct: 144 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVA 199

Query: 125 HFN--GSETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHA 174
           +      E M + +  Y P+S     ++  D        Y+ T   K     +P  + HA
Sbjct: 200 NITIYDEEAMVEAVALYNPVSFAF--EVTQDFMMYKTGIYSSTSCHK-----TPDKVNHA 252

Query: 175 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           VL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 253 VLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 300



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 245  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 300


>gi|13491752|gb|AAK27969.1|AF242373_1 cysteine protease [Ipomoea batatas]
          Length = 366

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 159/335 (47%), Gaps = 47/335 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCK 709
           F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD +P E   +
Sbjct: 49  FTVFKRRFGKVYASDEEHDYRLSEFKANMRRAKQHQELDPAAVHGVTQFSDLTPTEF--R 106

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F    R   +  AD  K   +L   E    +P  +DWR      P  +Q  CGSC +F
Sbjct: 107 RKFLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQGTCGSCCSF 160

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG   + TGKLV  S+ QLV+C  +C         SGC+G     + EYT +A 
Sbjct: 161 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAG 220

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GL  E+D+PY   + +   C +DK+K+        +     + +   L K GPL+V +N+
Sbjct: 221 GLMREEDHPYTGNDLQ--VCRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINA 278

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +    PYW+++NSWG 
Sbjct: 279 VFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGE 331

Query: 929 IGPDEGFFKIERGNNACGIEQ-IAGYATIDVVKND 962
              + G++KI RG N CG++  ++  A +    +D
Sbjct: 332 SWGENGYYKICRGRNVCGVDSMVSTVAAVSTTTSD 366



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 155/322 (48%), Gaps = 45/322 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCK 343
           F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD +P E   +
Sbjct: 49  FTVFKRRFGKVYASDEEHDYRLSEFKANMRRAKQHQELDPAAVHGVTQFSDLTPTEF--R 106

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F    R   +  AD  K   +L   E    +P  +DWR      P  +Q  CGSC +F
Sbjct: 107 RKFLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQGTCGSCCSF 160

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG   + TGKLV  S+ QLV+C  +C      S   GC+G  +    EYT +A 
Sbjct: 161 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAG 220

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E+D+PY  GN  +  C +DK+K+        +     + +   L K GPL+V +N+
Sbjct: 221 GLMREEDHPY-TGNDLQV-CRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINA 278

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  + PYW+ +NSWG 
Sbjct: 279 VFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGE 331

Query: 564 IGPDEGFFKIERGNNACGIEQI 585
              + G++KI RG N CG++ +
Sbjct: 332 SWGENGYYKICRGRNVCGVDSM 353



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 115/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR      P  +Q  CGSC +FS  G LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 133 LPSDFDWRDHGAVTPVKNQGTCGSCCSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 192

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +A GL  E+D+PY   + +   C +DK+K+     
Sbjct: 193 DPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDHPYTGNDLQ--VCRFDKTKIAAKVA 250

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVL 303

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 353



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLV 990
            ++ G  A  I  +     I  V     CS   L H VLLVGYG       +  + PYW++
Sbjct: 267  VKNGPLAVAINAVFMQTYIGGVSCPYICSKR-LDHGVLLVGYGSAGYAPIRMKEKPYWII 325

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    + G++KI RG N CG++ +
Sbjct: 326  KNSWGESWGENGYYKICRGRNVCGVDSM 353


>gi|26245875|gb|AAN77413.1| digestive cysteine protease intestain [Leptinotarsa decemlineata]
          Length = 287

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 139/288 (48%), Gaps = 25/288 (8%)

Query: 678 RFEYFKQDGHKKHERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 735
           R E   Q+  +    Y  G ++F+D +PEE +            ER    R+   K L E
Sbjct: 16  RIEEHNQNFSRGLSTYEMGVNKFADLTPEEFM------------ERFRPLRKTKPKFLSE 63

Query: 736 VEK---DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 792
             K   DG +P   DW K+        Q +CGSCWAFS  G +E    IKTGKL+  S+ 
Sbjct: 64  QAKFNFDGDLPAEVDWTKQGAVTEVKSQGSCGSCWAFSTTGSVESHNFIKTGKLISLSEQ 123

Query: 793 QLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTG 851
           QLV+C K  SGC G + + ++EY    G+ SE DYPY+  N     C ++ SK  +    
Sbjct: 124 QLVDCVKNNSGCAGGWMDIALEYIEADGIMSEDDYPYEERNT---TCRFNNSKAAVQIKS 180

Query: 852 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 909
              +  N    ++K +   GP+ V +   +        I  ND  C  +  DL HAVL+ 
Sbjct: 181 YKAIKKNDEIDLQKAVALEGPVPVAIEVTIAFQLYARGIL-NDPQCKNTEGDLTHAVLVT 239

Query: 910 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
           GYG QD   YW+V+NSWG     +G+ ++ R  +N CGI   A Y  +
Sbjct: 240 GYGSQDGKDYWIVKNSWGAEYGMDGYLRMSRNADNQCGIATRASYPVL 287



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 136/289 (47%), Gaps = 26/289 (8%)

Query: 312 RFEYFKQDGHKKHERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 369
           R E   Q+  +    Y  G ++F+D +PEE +            ER    R+   K L E
Sbjct: 16  RIEEHNQNFSRGLSTYEMGVNKFADLTPEEFM------------ERFRPLRKTKPKFLSE 63

Query: 370 VEK---DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 426
             K   DG +P   DW K+        Q +CGSCWAFS  G +E    IKTGKL+  S+ 
Sbjct: 64  QAKFNFDGDLPAEVDWTKQGAVTEVKSQGSCGSCWAFSTTGSVESHNFIKTGKLISLSEQ 123

Query: 427 QLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FT 485
           QLV+C K  SGC G   ++  +EY    G+ SE DYPY   N     C ++ SK  +   
Sbjct: 124 QLVDCVKNNSGCAG-GWMDIALEYIEADGIMSEDDYPYEERNT---TCRFNNSKAAVQIK 179

Query: 486 GKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETC--SPYDLGHAVLL 543
               +  N    ++K +   GP+ V +   +        I  ND  C  +  DL HAVL+
Sbjct: 180 SYKAIKKNDEIDLQKAVALEGPVPVAIEVTIAFQLYARGIL-NDPQCKNTEGDLTHAVLV 238

Query: 544 VGYGKQDDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
            GYG QD   YW+ +NSWG     +G+ ++ R  +N CGI   A Y  +
Sbjct: 239 TGYGSQDGKDYWIVKNSWGAEYGMDGYLRMSRNADNQCGIATRASYPVL 287



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 113/222 (50%), Gaps = 8/222 (3%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           DG +P   DW K+        Q  CGSCWAFS  G +E    IKTGKL+  S+ QLV+C 
Sbjct: 70  DGDLPAEVDWTKQGAVTEVKSQGSCGSCWAFSTTGSVESHNFIKTGKLISLSEQQLVDCV 129

Query: 68  KQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHF 126
           K  SGC G + + ++EY    G+ SE DYPY+  N     C ++ SK  +       +  
Sbjct: 130 KNNSGCAGGWMDIALEYIEADGIMSEDDYPYEERNT---TCRFNNSKAAVQIKSYKAIKK 186

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQD 184
           N    ++K +   GP+ V +   +        I  ND  C  +  DL HAVL+ GYG QD
Sbjct: 187 NDEIDLQKAVALEGPVPVAIEVTIAFQLYARGIL-NDPQCKNTEGDLTHAVLVTGYGSQD 245

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
              YW+V+NSWG     +G+ ++ R  +N CGI   A Y  +
Sbjct: 246 GKDYWIVKNSWGAEYGMDGYLRMSRNADNQCGIATRASYPVL 287


>gi|442754503|gb|JAA69411.1| Putative cathepsin l-like cysteine proteinase b [Ixodes ricinus]
          Length = 335

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 159/327 (48%), Gaps = 46/327 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KH-ERYG---------TSEFSDRSPEE 705
           + AF  K G+ Y ++ E   R + + ++ HK  KH E+Y           +EF D    E
Sbjct: 27  WSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNEFGDMLHHE 86

Query: 706 IL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
            +  + GFK   R Y+     RE    +  E  +D  +P   DWR K    P  +Q  CG
Sbjct: 87  FVSTRNGFK---RNYKD--QPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQGQCG 141

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTH-QAGL 821
           SCWAFS  G LEGQ+  K+G +V  S+  LV+C+     +GC+G   + + +Y     G+
Sbjct: 142 SCWAFSATGSLEGQHFRKSGSMVSLSEQNLVDCSTDFGNNGCEGGLMDNAFKYIRANKGI 201

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSET-MKKILYKYGPLSVLLN- 878
           ++EK YPY   NG    C + KS V   T   F+    GSET +KK +   GP+SV ++ 
Sbjct: 202 DTEKSYPY---NGTDGTCHFKKSTVGA-TDSGFVDIKEGSETQLKKAVATVGPISVAIDA 257

Query: 879 --------SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
                   SD ++D         +  C    L H VL+VGYG  +   YWLV+NSWG   
Sbjct: 258 SHESFQFYSDGVYD---------EPECDSESLDHGVLVVGYGTLNGTDYWLVKNSWGTTW 308

Query: 931 PDEGFFKIERG-NNACGIEQIAGYATI 956
            DEG+ ++ R   N CGI   A Y  +
Sbjct: 309 GDEGYIRMSRNKKNQCGIASSASYPLV 335



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 154/318 (48%), Gaps = 27/318 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KH-ERYG---------TSEFSDRSPEE 339
           + AF  K G+ Y ++ E   R + + ++ HK  KH E+Y           +EF D    E
Sbjct: 27  WSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNEFGDMLHHE 86

Query: 340 IL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
            +  + GFK   R Y+     RE    +  E  +D  +P   DWR K    P  +Q  CG
Sbjct: 87  FVSTRNGFK---RNYKD--QPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQGQCG 141

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH-QAG 455
           SCWAFS  G LEGQ+  K+G +V  S+  LV+C+    G  GC+G  ++   +Y     G
Sbjct: 142 SCWAFSATGSLEGQHFRKSGSMVSLSEQNLVDCSTDF-GNNGCEGGLMDNAFKYIRANKG 200

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNS 514
           +++EK YPY   NG    C + KS V            GSET +KK +   GP+SV +++
Sbjct: 201 IDTEKSYPY---NGTDGTCHFKKSTVGATDSGFVDIKEGSETQLKKAVATVGPISVAIDA 257

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
               F   +    ++  C    L H VL+VGYG  +   YWL +NSWG    DEG+ ++ 
Sbjct: 258 SHESFQFYSDGVYDEPECDSESLDHGVLVVGYGTLNGTDYWLVKNSWGTTWGDEGYIRMS 317

Query: 575 RG-NNACGIEQIAGYATI 591
           R   N CGI   A Y  +
Sbjct: 318 RNKKNQCGIASSASYPLV 335



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/234 (36%), Positives = 120/234 (51%), Gaps = 28/234 (11%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +D  +P   DWR K    P  +Q  CGSCWAFS  G LEGQ+  K+G +V  S+  LV+C
Sbjct: 115 EDFSLPKTVDWRTKGAVTPVKNQGQCGSCWAFSATGSLEGQHFRKSGSMVSLSEQNLVDC 174

Query: 67  AKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +     +GC+G   + + +Y     G+++EK YPY   NG    C + KS V   T   F
Sbjct: 175 STDFGNNGCEGGLMDNAFKYIRANKGIDTEKSYPY---NGTDGTCHFKKSTVGA-TDSGF 230

Query: 124 LHFN-GSET-MKKILYKYGPLSVLLN---------SDLIHDYNGTPIRKNDETCSPYDLG 172
           +    GSET +KK +   GP+SV ++         SD ++D         +  C    L 
Sbjct: 231 VDIKEGSETQLKKAVATVGPISVAIDASHESFQFYSDGVYD---------EPECDSESLD 281

Query: 173 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           H VL+VGYG  +   YWLV+NSWG    DEG+ ++ R   N CGI   A Y  +
Sbjct: 282 HGVLVVGYGTLNGTDYWLVKNSWGTTWGDEGYIRMSRNKKNQCGIASSASYPLV 335



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 957  DVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGI 1015
            D V ++  C    L H VL+VGYG  +   YWLV+NSWG    DEG+ ++ R   N CGI
Sbjct: 267  DGVYDEPECDSESLDHGVLVVGYGTLNGTDYWLVKNSWGTTWGDEGYIRMSRNKKNQCGI 326

Query: 1016 EQIAGYATI 1024
               A Y  +
Sbjct: 327  ASSASYPLV 335


>gi|94420703|gb|ABF18679.1| cysteine protease [Medicago sativa]
          Length = 350

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 156/317 (49%), Gaps = 34/317 (10%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y   +E+K RF+ F ++       +KK   Y  G + F+D + EE   
Sbjct: 50  SFARFANRYGKRYDTVDEMKRRFKIFSENLQLIESTNKKRLGYTLGVNHFADWTWEEF-- 107

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           ++    + +     +    ++  +++  EKD        WRK+ +     DQ  CGSCW 
Sbjct: 108 RSHRLGAAQNCSATLKGNHRITDVVLPAEKD--------WRKEGIVSEVKDQGHCGSCWT 159

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  YA   GK +  S+ QLV+CA   +  GC+G     + EY  +  GLE+E+
Sbjct: 160 FSTTGALESAYAQAFGKNISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKYNGGLETEE 219

Query: 826 DYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
            YPY   NG    C +    V +   G   +     + +K  +    P+SV    +++ D
Sbjct: 220 AYPYTGQNG---PCKFTSEDVAVQVLGSVNITLGAEDELKHAVAFARPVSVAF--EVVDD 274

Query: 885 YNGTPIRK---NDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +     +K      TC  +P D+ HAVL VGYG +D +PYWL++NSWG    D G+FK+E
Sbjct: 275 FR--LYKKGVYTSTTCGNTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGGEWGDHGYFKME 332

Query: 940 RGNNACGIEQIAGYATI 956
            G N CG+   + Y  +
Sbjct: 333 MGKNMCGVATCSSYPVV 349



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 149/314 (47%), Gaps = 27/314 (8%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y   +E+K RF+ F ++       +KK   Y  G + F+D + EE   
Sbjct: 50  SFARFANRYGKRYDTVDEMKRRFKIFSENLQLIESTNKKRLGYTLGVNHFADWTWEEF-- 107

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           ++    + +     +    ++  +++  EKD        WRK+ +     DQ  CGSCW 
Sbjct: 108 RSHRLGAAQNCSATLKGNHRITDVVLPAEKD--------WRKEGIVSEVKDQGHCGSCWT 159

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  YA   GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GLE+E+
Sbjct: 160 FSTTGALESAYAQAFGKNISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKYNGGLETEE 219

Query: 461 DYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
            YPY   NG    C +    V +   G   +     + +K  +    P+SV     +  F
Sbjct: 220 AYPYTGQNG---PCKFTSEDVAVQVLGSVNITLGAEDELKHAVAFARPVSVAFEV-VDDF 275

Query: 520 YNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
                      TC  +P D+ HAVL VGYG +D +PYWL +NSWG    D G+FK+E G 
Sbjct: 276 RLYKKGVYTSTTCGNTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGGEWGDHGYFKMEMGK 335

Query: 578 NACGIEQIAGYATI 591
           N CG+   + Y  +
Sbjct: 336 NMCGVATCSSYPVV 349



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 117/227 (51%), Gaps = 16/227 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRK+ +     DQ  CGSCW FS  G LE  YA   GK +  S+ QLV+CA
Sbjct: 130 DVVLPAEKDWRKEGIVSEVKDQGHCGSCWTFSTTGALESAYAQAFGKNISLSEQQLVDCA 189

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDF 123
              +  GC+G     + EY  +  GLE+E+ YPY   NG    C +    V +   G   
Sbjct: 190 GAFNNFGCNGGLPSQAFEYIKYNGGLETEEAYPYTGQNG---PCKFTSEDVAVQVLGSVN 246

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK---NDETC--SPYDLGHAVLLV 178
           +     + +K  +    P+SV    +++ D+     +K      TC  +P D+ HAVL V
Sbjct: 247 ITLGAEDELKHAVAFARPVSVAF--EVVDDFR--LYKKGVYTSTTCGNTPMDVNHAVLAV 302

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GYG +D +PYWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 303 GYGIEDGVPYWLIKNSWGGEWGDHGYFKMEMGKNMCGVATCSSYPVV 349



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V    TC  +P D+ HAVL VGYG +D +PYWL++NSWG    D G+FK+E G N CG+ 
Sbjct: 282  VYTSTTCGNTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGGEWGDHGYFKMEMGKNMCGVA 341

Query: 1017 QIAGYATI 1024
              + Y  +
Sbjct: 342  TCSSYPVV 349


>gi|417399160|gb|JAA46608.1| Putative pro-cathepsin h [Desmodus rotundus]
          Length = 336

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 153/321 (47%), Gaps = 40/321 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ +  + Y+  EE + R + F  +  K  E        + G + FSD +  E   K
Sbjct: 36  FKSWMEQHQKTYS-AEEYRHRLQTFASNQRKIKEHNARNHTFKMGINPFSDMTFAEF--K 92

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK     P  +Q  CGSCW 
Sbjct: 93  RRYLWSEP--QNCSATKSNY------LRGHGPYPTSVDWRKKGRFVSPVKNQGGCGSCWT 144

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AIKTGK++  S+ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 145 FSTTGALESAIAIKTGKMLSLSEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMEED 204

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVL--LNSDL 881
            YPY+   G+   C +   K   F  KD   +  N    M + +  Y P+S    + SD 
Sbjct: 205 SYPYE---GKDSNCRFQPEKAIAFV-KDVANITLNDEAAMVEAVALYNPVSFAFEVTSDF 260

Query: 882 I----HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           +      Y+ T   K     +P  + HAVL VGYG+Q+  PYW+V+NSWGP     G+F 
Sbjct: 261 MLYRKGIYSSTSCHK-----TPDKVNHAVLAVGYGEQNGKPYWIVKNSWGPYWGMNGYFL 315

Query: 938 IERGNNACGIEQIAGYATIDV 958
           IERG N CG+   A Y    V
Sbjct: 316 IERGTNMCGLAACASYPIPQV 336



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 151/319 (47%), Gaps = 35/319 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ +  + Y+  EE + R + F  +  K  E        + G + FSD +  E   K
Sbjct: 36  FKSWMEQHQKTYS-AEEYRHRLQTFASNQRKIKEHNARNHTFKMGINPFSDMTFAEF--K 92

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK     P  +Q  CGSCW 
Sbjct: 93  RRYLWSEP--QNCSATKSNY------LRGHGPYPTSVDWRKKGRFVSPVKNQGGCGSCWT 144

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AIKTGK++  S+ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 145 FSTTGALESAIAIKTGKMLSLSEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMEED 204

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVG--LNSHL 516
            YPY    G+   C +   K   F  KD   +  N    M + +  Y P+S    + S  
Sbjct: 205 SYPYE---GKDSNCRFQPEKAIAFV-KDVANITLNDEAAMVEAVALYNPVSFAFEVTSDF 260

Query: 517 IHFYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
           + +  G     +  +C  +P  + HAVL VGYG+Q+  PYW+ +NSWGP     G+F IE
Sbjct: 261 MLYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEQNGKPYWIVKNSWGPYWGMNGYFLIE 317

Query: 575 RGNNACGIEQIAGYATIDV 593
           RG N CG+   A Y    V
Sbjct: 318 RGTNMCGLAACASYPIPQV 336



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/231 (38%), Positives = 118/231 (51%), Gaps = 21/231 (9%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK     P  +Q  CGSCW FS  G LE   AIKTGK++  S+ QLV+CA
Sbjct: 115 GPYPTSVDWRKKGRFVSPVKNQGGCGSCWTFSTTGALESAIAIKTGKMLSLSEQQLVDCA 174

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPY+   G+   C +   K   F  KD  
Sbjct: 175 QNFNNHGCQGGLPSQAFEYIRYNKGIMEEDSYPYE---GKDSNCRFQPEKAIAFV-KDVA 230

Query: 124 -LHFNGSETMKKILYKYGPLSVL--LNSDLI----HDYNGTPIRKNDETCSPYDLGHAVL 176
            +  N    M + +  Y P+S    + SD +      Y+ T   K     +P  + HAVL
Sbjct: 231 NITLNDEAAMVEAVALYNPVSFAFEVTSDFMLYRKGIYSSTSCHK-----TPDKVNHAVL 285

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
            VGYG+Q+  PYW+V+NSWGP     G+F IERG N CG+   A Y    V
Sbjct: 286 AVGYGEQNGKPYWIVKNSWGPYWGMNGYFLIERGTNMCGLAACASYPIPQV 336



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 39/61 (63%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            +P  + HAVL VGYG+Q+  PYW+V+NSWGP     G+F IERG N CG+   A Y    
Sbjct: 276  TPDKVNHAVLAVGYGEQNGKPYWIVKNSWGPYWGMNGYFLIERGTNMCGLAACASYPIPQ 335

Query: 1026 V 1026
            V
Sbjct: 336  V 336


>gi|343978787|gb|AEM76722.1| cathepsin L-like proteinase [Triatoma brasiliensis]
          Length = 330

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 166/345 (48%), Gaps = 39/345 (11%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK----- 322
           ++  V  +A+  +  F N N  E ++ F V  G+ Y N  E   R + F  +  +     
Sbjct: 4   LLVAVAVIAVSCANRFYNIN-PEEWETFKVVHGKNYKNQFEEMFRRKIFMNNKKRIEAHN 62

Query: 323 -KHE------RYGTSEFSDRSPEEI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 374
            K+E      +   + F D    EI     GFK +  T         K E  +     D 
Sbjct: 63  AKYEQGEVSYKMKMNHFGDLMSHEIKALMNGFKMTPNT---------KREGKIYFPSND- 112

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
            +P + DWR+K    P  DQ  CGSCW+FS  G LEGQ  +K GKLV  S+  L++C+K+
Sbjct: 113 KLPKSVDWRQKGAVTPVKDQGQCGSCWSFSATGSLEGQIFLKKGKLVSLSEQNLMDCSKE 172

Query: 435 CSGCGGCDG--LEQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY 491
             G  GC+G  +++  +Y +   G+++E  YPY       + C + K KV    G D  Y
Sbjct: 173 -YGNNGCEGGLMDKAFQYVSDNKGIDTESSYPYE---ARDYACRFKKDKV---GGTDKGY 225

Query: 492 FNGSE----TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG 547
            +  E     ++  L   GP+SV +++    F+  +    N+  CS YDL H VL VGYG
Sbjct: 226 VDIPEGDEKALQNALATVGPISVAIDASHESFHFYSEGVYNEPYCSSYDLDHGVLAVGYG 285

Query: 548 KQDDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
            ++   YWL +NSWGP   + G+ KI R + N CGI  +A Y  +
Sbjct: 286 TENGQDYWLVKNSWGPSWGESGYIKIARNHSNHCGIASMASYPIV 330



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 167/342 (48%), Gaps = 34/342 (9%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK----- 688
           ++  V  +A+  +  F N N  E ++ F V  G+ Y N  E   R + F  +  +     
Sbjct: 4   LLVAVAVIAVSCANRFYNIN-PEEWETFKVVHGKNYKNQFEEMFRRKIFMNNKKRIEAHN 62

Query: 689 -KHE------RYGTSEFSDRSPEEI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 740
            K+E      +   + F D    EI     GFK +  T         K E  +     D 
Sbjct: 63  AKYEQGEVSYKMKMNHFGDLMSHEIKALMNGFKMTPNT---------KREGKIYFPSND- 112

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
            +P + DWR+K    P  DQ  CGSCW+FS  G LEGQ  +K GKLV  S+  L++C+K+
Sbjct: 113 KLPKSVDWRQKGAVTPVKDQGQCGSCWSFSATGSLEGQIFLKKGKLVSLSEQNLMDCSKE 172

Query: 801 --CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
              +GC+G   + + +Y +   G+++E  YPY+      + C + K KV   T K ++  
Sbjct: 173 YGNNGCEGGLMDKAFQYVSDNKGIDTESSYPYE---ARDYACRFKKDKVG-GTDKGYVDI 228

Query: 858 -NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 915
             G E  ++  L   GP+SV +++     +  +    N+  CS YDL H VL VGYG ++
Sbjct: 229 PEGDEKALQNALATVGPISVAIDASHESFHFYSEGVYNEPYCSSYDLDHGVLAVGYGTEN 288

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
              YWLV+NSWGP   + G+ KI R + N CGI  +A Y  +
Sbjct: 289 GQDYWLVKNSWGPSWGESGYIKIARNHSNHCGIASMASYPIV 330



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 124/221 (56%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P + DWR+K    P  DQ  CGSCW+FS  G LEGQ  +K GKLV  S+  L++C+K+ 
Sbjct: 114 LPKSVDWRQKGAVTPVKDQGQCGSCWSFSATGSLEGQIFLKKGKLVSLSEQNLMDCSKEY 173

Query: 70  -CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + + +Y +   G+++E  YPY+      + C + K KV   T K ++   
Sbjct: 174 GNNGCEGGLMDKAFQYVSDNKGIDTESSYPYE---ARDYACRFKKDKVG-GTDKGYVDIP 229

Query: 127 NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            G E  ++  L   GP+SV +++     +  +    N+  CS YDL H VL VGYG ++ 
Sbjct: 230 EGDEKALQNALATVGPISVAIDASHESFHFYSEGVYNEPYCSSYDLDHGVLAVGYGTENG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YWLV+NSWGP   + G+ KI R + N CGI  +A Y  +
Sbjct: 290 QDYWLVKNSWGPSWGESGYIKIARNHSNHCGIASMASYPIV 330



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 16/111 (14%)

Query: 930  GPDEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAV 974
            G D+G+  I  G+       +A    I V               V N+  CS YDL H V
Sbjct: 220  GTDKGYVDIPEGDEKALQNALATVGPISVAIDASHESFHFYSEGVYNEPYCSSYDLDHGV 279

Query: 975  LLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
            L VGYG ++   YWLV+NSWGP   + G+ KI R + N CGI  +A Y  +
Sbjct: 280  LAVGYGTENGQDYWLVKNSWGPSWGESGYIKIARNHSNHCGIASMASYPIV 330


>gi|332252750|ref|XP_003275518.1| PREDICTED: pro-cathepsin H [Nomascus leucogenys]
          Length = 335

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 153/314 (48%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHHKTYST-EEYHHRLQMFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD  +      E M + +  Y P+S    +  D 
Sbjct: 204 TYPYQGKDGY---CKFRPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IE
Sbjct: 260 MMYRRGI---YSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIE 316

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 317 RGKNMCGLAACASY 330



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 152/316 (48%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHHKTYST-EEYHHRLQMFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGL---NSH 515
            YPY+  +G    C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 204 TYPYQGKDGY---CKFRPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 516 LIH---FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +++    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 MMYRRGIYSSTSCHK-----TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 174 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGY---CKFRPGKAIGFV-KDVA 229

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 230 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRRGI---YSSTSCHKTPDKVNHAVLAV 286

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 287 GYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|23577865|ref|NP_703114.1| viral cathepsin [Rachiplusia ou MNPV]
 gi|37077115|sp|Q8B9D5.1|CATV_NPVR1 RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|23476510|gb|AAN28057.1| viral cathepsin [Rachiplusia ou MNPV]
          Length = 323

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 157/311 (50%), Gaps = 28/311 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 709
           F+ F+ +  + Y ++ E   RF+ F+ +             +Y  ++FSD S +E + K 
Sbjct: 28  FEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQNDSAKYEINKFSDLSKDETIAKY 87

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWAF
Sbjct: 88  TGLSLPIQT--------QNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAF 139

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYP 828
           +    LE Q+AIK  +L+  S+ Q+++C    +GC+G     + E      G++ E DYP
Sbjct: 140 ATLASLESQFAIKHNQLINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYP 199

Query: 829 YKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETMKKILYKYGPLSVLLNSDLIHDYN 886
           Y+  N     C  + +K  L   KD   +     E +K +L   GP+ + +++  I +Y 
Sbjct: 200 YEADNN---NCRMNTNKF-LVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYK 255

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
              I+     C    L HAVLLVGYG ++NIPYW  +N+WG    +EGFF++++  NACG
Sbjct: 256 QGIIK----YCFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEEGFFRVQQNINACG 311

Query: 947 IE-QIAGYATI 956
           +  ++A  A I
Sbjct: 312 MRNELASTAVI 322



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 153/311 (49%), Gaps = 27/311 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 343
           F+ F+ +  + Y ++ E   RF+ F+ +             +Y  ++FSD S +E + K 
Sbjct: 28  FEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQNDSAKYEINKFSDLSKDETIAKY 87

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWAF
Sbjct: 88  TGLSLPIQT--------QNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAF 139

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIE-YTHQAGLESEKDY 462
           +    LE Q+AIK  +L+  S+ Q+++C    +GC G   L    E      G++ E DY
Sbjct: 140 ATLASLESQFAIKHNQLINLSEQQMIDCDFVDAGCNG-GLLHTAFEAIIKMGGVQLESDY 198

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG-SETMKKILYKYGPLSVGLNSHLIHFYN 521
           PY   N     C  + +K  +     + Y     E +K +L   GP+ + +++  I  Y 
Sbjct: 199 PYEADNN---NCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYK 255

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
              I+     C    L HAVLLVGYG +++IPYW  +N+WG    +EGFF++++  NACG
Sbjct: 256 QGIIK----YCFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEEGFFRVQQNINACG 311

Query: 582 IE-QIAGYATI 591
           +  ++A  A I
Sbjct: 312 MRNELASTAVI 322



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 119/221 (53%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ Q+++C  
Sbjct: 110 GKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GC+G     + E      G++ E DYPY+  N     C  + +K  L   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNTNKF-LVQVKDCYRYI 225

Query: 128 G--SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 226 TVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IPYW  +N+WG    +EGFF++++  NACG+  ++A  A I
Sbjct: 282 IPYWTFKNTWGTDWGEEGFFRVQQNINACGMRNELASTAVI 322



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IPYW  +N+WG    +EGFF++++  NACG+  ++A  A 
Sbjct: 262  CFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEEGFFRVQQNINACGMRNELASTAV 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|33242878|gb|AAQ01143.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 167/338 (49%), Gaps = 22/338 (6%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 327
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILVAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREK-VEKMLMEVE-----KDGPVPDAWD 381
             +     S    + K G    E  ++RI+    K V+K L+  E      +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDNDDNGTLPKSVD 119

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCG 439
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GCG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 440 GCDGLEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSET 497
           G   ++Q  +Y     GL++E+ YPY   + +   C +D S V     G   +       
Sbjct: 180 G-GLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGYKDVKSGNEHA 236

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD---IPY 554
           +K+ +   GP+SV +++    F   +    ++  CS   L H VL VGYG  +D     +
Sbjct: 237 LKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAF 296

Query: 555 WLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           W+ +NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 297 WIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 165/337 (48%), Gaps = 21/337 (6%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 693
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILVAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREK-VEKMLMEVE-----KDGPVPDAWD 747
             +     S    + K G    E  ++RI+    K V+K L+  E      +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDNDDNGTLPKSVD 119

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCD 805
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GC 
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 806 GCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETM 863
           G   + + +Y     GL++E+ YPY   + +   C +D S V     G   +       +
Sbjct: 180 GGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGYKDVKSGNEHAL 237

Query: 864 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---IPYW 920
           K+ +   GP+SV +++        +    ++  CS   L H VL VGYG  ++     +W
Sbjct: 238 KRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFW 297

Query: 921 LVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 298 IVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 121/228 (53%), Gaps = 10/228 (4%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           + +G +P + DWR  ++     DQ +CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+
Sbjct: 109 DDNGTLPKSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVD 168

Query: 66  CAKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK 121
           C+K     GC G   + + +Y     GL++E+ YPY   + +   C +D S V     G 
Sbjct: 169 CSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGY 226

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
             +       +K+ +   GP+SV +++        +    ++  CS   L H VL VGYG
Sbjct: 227 KDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYG 286

Query: 182 KQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 287 AMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|728637|emb|CAA59441.1| cathepsin l [Litopenaeus vannamei]
          Length = 326

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 160/324 (49%), Gaps = 34/324 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYG-------TSEFSD 334
           ++ + ++ F  + GR+YA+ +E + R   F+Q     D H      G        ++F D
Sbjct: 18  SLRQQWQNFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EEI+          T    +    +    +++ + D  +P+  DWR K    P  DQ
Sbjct: 78  MTSEEIVA---------TMNGFLGAPTRRPAAVLKAD-DETLPEKVDWRTKGAVTPVKDQ 127

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYTH- 452
             CGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +    G   GL +Q   Y   
Sbjct: 128 KQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCSDKFGNMGCMGGLMDQAFRYIKA 187

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVG 511
             G+++E  YPY   +G   KC +D S V           +GSE+ +KK +   GP+SVG
Sbjct: 188 NKGIDTEDSYPYEAQDG---KCRFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVG 244

Query: 512 LNS--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDE 568
           +++     HFY+ T +  +D  CS   L H VL VGYG  ++   +WL +NSW     D+
Sbjct: 245 IDASQSTFHFYH-TGVYHDDH-CSSTMLDHGVLAVGYGSDENGGDFWLVKNSWNTSWGDK 302

Query: 569 GFFKIERG-NNACGIEQIAGYATI 591
           G+ K+ R  NN CGI   A Y  +
Sbjct: 303 GYIKMSRNRNNNCGIASQASYPLV 326



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 158/324 (48%), Gaps = 35/324 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYG-------TSEFSD 700
           ++ + ++ F  + GR+YA+ +E + R   F+Q     D H      G        ++F D
Sbjct: 18  SLRQQWQNFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EEI+          T    +    +    +++ + D  +P+  DWR K    P  DQ
Sbjct: 78  MTSEEIVA---------TMNGFLGAPTRRPAAVLKAD-DETLPEKVDWRTKGAVTPVKDQ 127

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH- 817
             CGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +    GC G   + +  Y   
Sbjct: 128 KQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCSDKFGNMGCMGGLMDQAFRYIKA 187

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVL 876
             G+++E  YPY+  +G   KC +D S V    TG   +       +KK +   GP+SV 
Sbjct: 188 NKGIDTEDSYPYEAQDG---KCRFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVG 244

Query: 877 LNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDE 933
           +++     H Y+ T +  +D  CS   L H VL VGYG  +N   +WLV+NSW     D+
Sbjct: 245 IDASQSTFHFYH-TGVYHDDH-CSSTMLDHGVLAVGYGSDENGGDFWLVKNSWNTSWGDK 302

Query: 934 GFFKIERG-NNACGIEQIAGYATI 956
           G+ K+ R  NN CGI   A Y  +
Sbjct: 303 GYIKMSRNRNNNCGIASQASYPLV 326



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 119/226 (52%), Gaps = 13/226 (5%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P+  DWR K    P  DQ  CGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+
Sbjct: 106 DETLPEKVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCS 165

Query: 68  KQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 123
            +    GC G   + +  Y     G+++E  YPY+  +G   KC +D S V    TG   
Sbjct: 166 DKFGNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQDG---KCRFDASNVGATDTGYVD 222

Query: 124 LHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           +       +KK +   GP+SV +++     H Y+ T +  +D  CS   L H VL VGYG
Sbjct: 223 VEHGSESALKKAVATIGPISVGIDASQSTFHFYH-TGVYHDDH-CSSTMLDHGVLAVGYG 280

Query: 182 KQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +N   +WLV+NSW     D+G+ K+ R  NN CGI   A Y  +
Sbjct: 281 SDENGGDFWLVKNSWNTSWGDKGYIKMSRNRNNNCGIASQASYPLV 326



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D G+  +E G+ +   + +A    I V               V +D+ CS   L H VL 
Sbjct: 217  DTGYVDVEHGSESALKKAVATIGPISVGIDASQSTFHFYHTGVYHDDHCSSTMLDHGVLA 276

Query: 977  VGYGKQDDI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG  ++   +WLV+NSW     D+G+ K+ R  NN CGI   A Y  +
Sbjct: 277  VGYGSDENGGDFWLVKNSWNTSWGDKGYIKMSRNRNNNCGIASQASYPLV 326


>gi|1617037|emb|CAA26255.1| cysteine proteinase I precursor [Dictyostelium discoideum]
          Length = 343

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 151/329 (45%), Gaps = 43/329 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD------------GHKKHERYGTSEFSDRSPEE 339
           F  F  K  ++Y++ EE  ERFE FK +             HK   ++G ++F+D S +E
Sbjct: 29  FLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87

Query: 340 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
                   +     E I  D   V   L + E    +P A+DWR +    P  +Q  CGS
Sbjct: 88  FK-----NYYLNNKEAIFTDDLPVADYLDD-EFINSIPTAFDWRTRGAVTPVKNQGQCGS 141

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCG-GCDGLEQPIEYTH 452
           CW+FS  G +EGQ+ I   KLV  S+  LV+C  +C        C  GC+G  QP  Y +
Sbjct: 142 CWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNY 201

Query: 453 ---QAGLESEKDYPYRNGNGEK--FKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGP 507
                G+++E  YPY    G +  F  A   +K+  FT    +       M   +   GP
Sbjct: 202 IIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFT----MIPKNETVMAGYIVSTGP 257

Query: 508 LSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI-----PYWLARNSWG 562
           L++  ++    FY G      D  C+P  L H +L+VGY  ++ I     PYW+ +NSWG
Sbjct: 258 LAIAADAVEWQFYIGGVF---DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWG 314

Query: 563 PIGPDEGFFKIERGNNACGIEQIAGYATI 591
               ++G+  + RG N CG+      + I
Sbjct: 315 ADWGEQGYIYLRRGKNTCGVSNFVSTSII 343



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 149/329 (45%), Gaps = 44/329 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD------------GHKKHERYGTSEFSDRSPEE 705
           F  F  K  ++Y++ EE  ERFE FK +             HK   ++G ++F+D S +E
Sbjct: 29  FLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87

Query: 706 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
                   +     E I  D   V   L + E    +P A+DWR +    P  +Q  CGS
Sbjct: 88  FK-----NYYLNNKEAIFTDDLPVADYLDD-EFINSIPTAFDWRTRGAVTPVKNQGQCGS 141

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC----------SGCDGCFFEPSIEY 815
           CW+FS  G +EGQ+ I   KLV  S+  LV+C  +C           GC+G     +  Y
Sbjct: 142 CWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNY 201

Query: 816 -THQAGLESEKDYPYKNANGEK--FKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGP 872
                G+++E  YPY    G +  F  A   +K+  FT    +       M   +   GP
Sbjct: 202 IIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFT----MIPKNETVMAGYIVSTGP 257

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-----NIPYWLVRNSWG 927
           L++  ++     Y G      D  C+P  L H +L+VGY  ++     N+PYW+V+NSWG
Sbjct: 258 LAIAADAVEWQFYIGGVF---DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWG 314

Query: 928 PIGPDEGFFKIERGNNACGIEQIAGYATI 956
               ++G+  + RG N CG+      + I
Sbjct: 315 ADWGEQGYIYLRRGKNTCGVSNFVSTSII 343



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 111/233 (47%), Gaps = 25/233 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P A+DWR +    P  +Q  CGSCW+FS  G +EGQ+ I   KLV  S+  LV+C  +C
Sbjct: 118 IPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHEC 177

Query: 71  ----------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEK--FKCAYDKSKVKL 117
                      GC+G     +  Y     G+++E  YPY    G +  F  A   +K+  
Sbjct: 178 MEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISN 237

Query: 118 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
           FT    +       M   +   GPL++  ++     Y G      D  C+P  L H +L+
Sbjct: 238 FT----MIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVF---DIPCNPNSLDHGILI 290

Query: 178 VGYGKQD-----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           VGY  ++     N+PYW+V+NSWG    ++G+  + RG N CG+      + I
Sbjct: 291 VGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 343



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 5/68 (7%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDI-----PYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            D  C+P  L H +L+VGY  ++ I     PYW+V+NSWG    ++G+  + RG N CG+ 
Sbjct: 276  DIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVS 335

Query: 1017 QIAGYATI 1024
                 + I
Sbjct: 336  NFVSTSII 343


>gi|357473427|ref|XP_003606998.1| Cysteine proteinase [Medicago truncatula]
 gi|355508053|gb|AES89195.1| Cysteine proteinase [Medicago truncatula]
          Length = 362

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 156/323 (48%), Gaps = 47/323 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCK 709
           F  F  K G+ Y++ +E   RF+ FK + +  K+H+       +G + FSD +P E    
Sbjct: 48  FNLFKHKFGKVYSSKDEHDYRFKIFKSNLNRAKRHQLMDPSAVHGVTRFSDLTPRE---- 103

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+ S      +   ++     ++  +    +P  +DWR+K       +Q +CGSCW+F
Sbjct: 104 --FRKSVLGLRGVGLPKDANAAPILPTDN---LPKDFDWREKGAVTAVKNQGSCGSCWSF 158

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG + + TGKLV  S+ QLV+C  +C         +GC+G     + EY  ++ 
Sbjct: 159 STTGALEGAHFLSTGKLVSLSEQQLVDCDHECDPEQPGSCDAGCNGGLMNSAFEYILKSG 218

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           G+  E+DYPY     ++  C +DK K+        +     + +   L K GPL++ LN+
Sbjct: 219 GVMREEDYPYSGT--DRGSCKFDKKKIAASVANFSVVSLDEDQIAANLVKNGPLAIALNA 276

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG       +    PYW+++NSWG 
Sbjct: 277 VYMQTYVGG-------VSCPYICSKRLDHGVLLVGYGSGAYSPIRLKEKPYWIIKNSWGE 329

Query: 929 IGPDEGFFKIERGNNACGIEQIA 951
              + G++KI RG N CG++ + 
Sbjct: 330 TWGENGYYKICRGRNICGVDSMV 352



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 156/323 (48%), Gaps = 46/323 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCK 343
           F  F  K G+ Y++ +E   RF+ FK + +  K+H+       +G + FSD +P E    
Sbjct: 48  FNLFKHKFGKVYSSKDEHDYRFKIFKSNLNRAKRHQLMDPSAVHGVTRFSDLTPRE---- 103

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+ S      +   ++     ++  +    +P  +DWR+K       +Q +CGSCW+F
Sbjct: 104 --FRKSVLGLRGVGLPKDANAAPILPTDN---LPKDFDWREKGAVTAVKNQGSCGSCWSF 158

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA- 454
           S  G LEG + + TGKLV  S+ QLV+C  +C      S   GC+G  +    EY  ++ 
Sbjct: 159 STTGALEGAHFLSTGKLVSLSEQQLVDCDHECDPEQPGSCDAGCNGGLMNSAFEYILKSG 218

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           G+  E+DYPY     ++  C +DK K+        +     + +   L K GPL++ LN+
Sbjct: 219 GVMREEDYPY--SGTDRGSCKFDKKKIAASVANFSVVSLDEDQIAANLVKNGPLAIALNA 276

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG       +  + PYW+ +NSWG 
Sbjct: 277 VYMQTYVGG-------VSCPYICSKRLDHGVLLVGYGSGAYSPIRLKEKPYWIIKNSWGE 329

Query: 564 IGPDEGFFKIERGNNACGIEQIA 586
              + G++KI RG N CG++ + 
Sbjct: 330 TWGENGYYKICRGRNICGVDSMV 352



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 116/231 (50%), Gaps = 30/231 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K       +Q  CGSCW+FS  G LEG + + TGKLV  S+ QLV+C  +C
Sbjct: 131 LPKDFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGAHFLSTGKLVSLSEQQLVDCDHEC 190

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC+G     + EY  ++ G+  E+DYPY     ++  C +DK K+     
Sbjct: 191 DPEQPGSCDAGCNGGLMNSAFEYILKSGGVMREEDYPYSGT--DRGSCKFDKKKIAASVA 248

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL++ LN+  +  Y G           PY     L H VL
Sbjct: 249 NFSVVSLDEDQIAANLVKNGPLAIALNAVYMQTYVGG-------VSCPYICSKRLDHGVL 301

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ + 
Sbjct: 302 LVGYGSGAYSPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNICGVDSMV 352



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 7/57 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 1019
            L H VLLVGYG       +  + PYW+++NSWG    + G++KI RG N CG++ + 
Sbjct: 296  LDHGVLLVGYGSGAYSPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNICGVDSMV 352


>gi|33242872|gb|AAQ01140.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 166/338 (49%), Gaps = 22/338 (6%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 327
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 381
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCG 439
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GCG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSSKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 440 GCDGLEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSET 497
           G   ++Q  +Y     GL++E+ YPY   + +   C +D S V     G   +       
Sbjct: 180 G-GLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGYKDVKSGNEHA 236

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD---IPY 554
           +K+ +   GP+SV +++    F   +    ++  CS   L H VL VGYG  +D     +
Sbjct: 237 LKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAF 296

Query: 555 WLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           W+ +NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 297 WIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 21/337 (6%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 693
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 747
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCD 805
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GC 
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSSKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 806 GCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETM 863
           G   + + +Y     GL++E+ YPY   + +   C +D S V     G   +       +
Sbjct: 180 GGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGYKDVKSGNEHAL 237

Query: 864 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---IPYW 920
           K+ +   GP+SV +++        +    ++  CS   L H VL VGYG  ++     +W
Sbjct: 238 KRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFW 297

Query: 921 LVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 298 IVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 121/228 (53%), Gaps = 10/228 (4%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           + +G +P + DWR  ++     DQ +CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+
Sbjct: 109 DDNGTLPKSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSSKTGKLVDLSEQQLVD 168

Query: 66  CAKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK 121
           C+K     GC G   + + +Y     GL++E+ YPY   + +   C +D S V     G 
Sbjct: 169 CSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGY 226

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
             +       +K+ +   GP+SV +++        +    ++  CS   L H VL VGYG
Sbjct: 227 KDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYG 286

Query: 182 KQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 287 AMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|403352840|gb|EJY75943.1| Oryzain gamma chain [Oxytricha trifallax]
          Length = 338

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 162/340 (47%), Gaps = 37/340 (10%)

Query: 630 ITDQVVARVDTLAIEGSLTFDNENIL----ETFKAFIVKRGRQYANDEEIKERFEYFKQD 685
            T  +V  V   ++  S  F  E+ L    E F  +I + G+ YA   E ++R + F + 
Sbjct: 4   FTLAIVGIVSLSSVFASDAFLKESGLVSSTEEFLNYIARFGKSYATKAEFQKRAKLFLKT 63

Query: 686 GHKKHE----------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 735
             +  +          R G ++FSD + EE     G K SE  ++        V    ++
Sbjct: 64  KMEIMQAASSNSVPTFRLGFNQFSDWTEEEFQAILGNKPSEEEHD--------VYHEHLK 115

Query: 736 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 795
           + +D  +P + DWR   V  P  DQ  CGSCWAFS A  +E  +AI+ GKL   S+ QLV
Sbjct: 116 ILEDAILPASKDWRDDGVVNPVKDQGRCGSCWAFSTAAGVESHFAIQFGKLYSLSEQQLV 175

Query: 796 EC--AKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 853
           +C  A   +GC+G       +Y    GLE E DYPY  A+G    C  DKSK+  +  +D
Sbjct: 176 DCSTAYDNAGCNGGLATQGYDYVKSYGLEQEADYPYLAADG---TCHRDKSKIVAYV-ED 231

Query: 854 F--LHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 910
           F  +       +K  L   GP SV ++ S +  +Y    +     T     L HA+L VG
Sbjct: 232 FHTVQTLSPSQLKAALATQGPASVSVDASGVFKNYQSGILNAGCGT----SLNHAILAVG 287

Query: 911 YGKQDNIPYWLVRNSWGPIGPDEGFFK--IERGNNACGIE 948
           YG ++   Y++VRNSWGP   + G+ +  I  G   CG++
Sbjct: 288 YGVENGQEYYIVRNSWGPSWGENGYIRLAIVEGQGTCGVQ 327



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 157/340 (46%), Gaps = 36/340 (10%)

Query: 264 ITDQVVARVDTLAIEGSLTFDNENIL----ETFKAFIVKRGRQYANDEEIKERFEYFKQD 319
            T  +V  V   ++  S  F  E+ L    E F  +I + G+ YA   E ++R + F + 
Sbjct: 4   FTLAIVGIVSLSSVFASDAFLKESGLVSSTEEFLNYIARFGKSYATKAEFQKRAKLFLKT 63

Query: 320 GHKKHE----------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 369
             +  +          R G ++FSD + EE     G K SE  ++        V    ++
Sbjct: 64  KMEIMQAASSNSVPTFRLGFNQFSDWTEEEFQAILGNKPSEEEHD--------VYHEHLK 115

Query: 370 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 429
           + +D  +P + DWR   V  P  DQ  CGSCWAFS A  +E  +AI+ GKL   S+ QLV
Sbjct: 116 ILEDAILPASKDWRDDGVVNPVKDQGRCGSCWAFSTAAGVESHFAIQFGKLYSLSEQQLV 175

Query: 430 ECAKQCSGCGGCDGL-EQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKD 488
           +C+      G   GL  Q  +Y    GLE E DYPY   +G    C  DKSK+  +  +D
Sbjct: 176 DCSTAYDNAGCNGGLATQGYDYVKSYGLEQEADYPYLAADG---TCHRDKSKIVAYV-ED 231

Query: 489 FLYFN--GSETMKKILYKYGPLSVGLN-SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVG 545
           F          +K  L   GP SV ++ S +   Y    +     T     L HA+L VG
Sbjct: 232 FHTVQTLSPSQLKAALATQGPASVSVDASGVFKNYQSGILNAGCGT----SLNHAILAVG 287

Query: 546 YGKQDDIPYWLARNSWGPIGPDEGFFK--IERGNNACGIE 583
           YG ++   Y++ RNSWGP   + G+ +  I  G   CG++
Sbjct: 288 YGVENGQEYYIVRNSWGPSWGENGYIRLAIVEGQGTCGVQ 327



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 116/222 (52%), Gaps = 15/222 (6%)

Query: 3   MEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
           +++ +D  +P + DWR   V  P  DQ  CGSCWAFS A  +E  +AI+ GKL   S+ Q
Sbjct: 114 LKILEDAILPASKDWRDDGVVNPVKDQGRCGSCWAFSTAAGVESHFAIQFGKLYSLSEQQ 173

Query: 63  LVEC--AKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           LV+C  A   +GC+G       +Y    GLE E DYPY  A+G    C  DKSK+  +  
Sbjct: 174 LVDCSTAYDNAGCNGGLATQGYDYVKSYGLEQEADYPYLAADG---TCHRDKSKIVAYV- 229

Query: 121 KDF--LHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
           +DF  +       +K  L   GP SV ++ S +  +Y    +     T     L HA+L 
Sbjct: 230 EDFHTVQTLSPSQLKAALATQGPASVSVDASGVFKNYQSGILNAGCGT----SLNHAILA 285

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFK--IERGNNACGIE 217
           VGYG ++   Y++VRNSWGP   + G+ +  I  G   CG++
Sbjct: 286 VGYGVENGQEYYIVRNSWGPSWGENGYIRLAIVEGQGTCGVQ 327



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFK--IERGNNACGIE 1016
             L HA+L VGYG ++   Y++VRNSWGP   + G+ +  I  G   CG++
Sbjct: 278  SLNHAILAVGYGVENGQEYYIVRNSWGPSWGENGYIRLAIVEGQGTCGVQ 327


>gi|410493601|ref|YP_006908539.1| V-CATH [Epinotia aporema granulovirus]
 gi|354805035|gb|AER41457.1| V-CATH [Epinotia aporema granulovirus]
          Length = 329

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 155/313 (49%), Gaps = 26/313 (8%)

Query: 649 FDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSD 700
           +D  N    F  F++K  + YA DEE   ++E F+ +    +E+        Y  +  SD
Sbjct: 19  YDLNNSQALFDDFVIKYNKVYATDEERAAKYEIFRNNLVVINEKNSKTTNALYDINRLSD 78

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            +  E+L  TGF       ++ +   ++ E +L+       +P ++DWR  N   P  +Q
Sbjct: 79  LNKNELLRSTGFS---VNLKKNLNPSKECEYVLVADAPSRSLPASFDWRANNAVTPVKNQ 135

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE---YTH 817
             CGSCWAFS    +E  YAIK G  V+ ++  L+ C    + C+G     ++E      
Sbjct: 136 LDCGSCWAFSTIANIESLYAIKYGVEVDLAEQYLLNCDYTNNNCNGGLMHWALENILIND 195

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSV 875
             G+  E+  PY    GE   C  DK +  LFT  +   FN     T++++L + GP+SV
Sbjct: 196 NGGVVEERHAPYV---GEVTAC--DKEEY-LFTITNCKRFNLVNEHTLQQLLIENGPISV 249

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEG 934
            ++   I DY       +D   S   L HAVLLVGYG   N IPYW+ +NSWG    ++G
Sbjct: 250 AIDVFDILDYKQGI---SDNCRSDNGLNHAVLLVGYGVSINGIPYWVFKNSWGDDWGEQG 306

Query: 935 FFKIERGNNACGI 947
           FF++ R  N+CG+
Sbjct: 307 FFRVRRDINSCGM 319



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 31/316 (9%)

Query: 283 FDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSD 334
           +D  N    F  F++K  + YA DEE   ++E F+ +    +E+        Y  +  SD
Sbjct: 19  YDLNNSQALFDDFVIKYNKVYATDEERAAKYEIFRNNLVVINEKNSKTTNALYDINRLSD 78

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            +  E+L  TGF       ++ +   ++ E +L+       +P ++DWR  N   P  +Q
Sbjct: 79  LNKNELLRSTGFS---VNLKKNLNPSKECEYVLVADAPSRSLPASFDWRANNAVTPVKNQ 135

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE----QPIEY 450
             CGSCWAFS    +E  YAIK G  V+ ++  L+ C    + C G  GL     + I  
Sbjct: 136 LDCGSCWAFSTIANIESLYAIKYGVEVDLAEQYLLNCDYTNNNCNG--GLMHWALENILI 193

Query: 451 THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN--GSETMKKILYKYGPL 508
               G+  E+  PY    GE   C  DK +  LFT  +   FN     T++++L + GP+
Sbjct: 194 NDNGGVVEERHAPYV---GEVTAC--DKEEY-LFTITNCKRFNLVNEHTLQQLLIENGPI 247

Query: 509 SVGLNSH-LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DDIPYWLARNSWGPIGP 566
           SV ++   ++ +  G      D   S   L HAVLLVGYG   + IPYW+ +NSWG    
Sbjct: 248 SVAIDVFDILDYKQGIS----DNCRSDNGLNHAVLLVGYGVSINGIPYWVFKNSWGDDWG 303

Query: 567 DEGFFKIERGNNACGI 582
           ++GFF++ R  N+CG+
Sbjct: 304 EQGFFRVRRDINSCGM 319



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 18/218 (8%)

Query: 8   DGP---VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           D P   +P ++DWR  N   P  +Q DCGSCWAFS    +E  YAIK G  V+ ++  L+
Sbjct: 111 DAPSRSLPASFDWRANNAVTPVKNQLDCGSCWAFSTIANIESLYAIKYGVEVDLAEQYLL 170

Query: 65  ECAKQCSGCDGCFFEPSIE---YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 121
            C    + C+G     ++E        G+  E+  PY    GE   C  DK +  LFT  
Sbjct: 171 NCDYTNNNCNGGLMHWALENILINDNGGVVEERHAPYV---GEVTAC--DKEEY-LFTIT 224

Query: 122 DFLHFN--GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
           +   FN     T++++L + GP+SV ++   I DY       +D   S   L HAVLLVG
Sbjct: 225 NCKRFNLVNEHTLQQLLIENGPISVAIDVFDILDYKQGI---SDNCRSDNGLNHAVLLVG 281

Query: 180 YGKQDN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           YG   N IPYW+ +NSWG    ++GFF++ R  N+CG+
Sbjct: 282 YGVSINGIPYWVFKNSWGDDWGEQGFFRVRRDINSCGM 319



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 970  LGHAVLLVGYGKQ-DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            L HAVLLVGYG   + IPYW+ +NSWG    ++GFF++ R  N+CG+
Sbjct: 273  LNHAVLLVGYGVSINGIPYWVFKNSWGDDWGEQGFFRVRRDINSCGM 319


>gi|242045644|ref|XP_002460693.1| hypothetical protein SORBIDRAFT_02g033270 [Sorghum bicolor]
 gi|241924070|gb|EER97214.1| hypothetical protein SORBIDRAFT_02g033270 [Sorghum bicolor]
          Length = 373

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 163/374 (43%), Gaps = 59/374 (15%)

Query: 625 SLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK- 683
           S  D    QV     + A  G+L    E     F AF+ + GR+Y+  EE   R   F  
Sbjct: 19  STDDGFIRQVTDGRRSRAGAGALGLLPE---AQFAAFVRRHGRRYSGPEEYARRLRVFAA 75

Query: 684 -------QDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLME 735
                          R+G + FSD + EE   + TG +               V++++M 
Sbjct: 76  NLARAAAHQALDPTARHGVTPFSDLTREEFEARLTGVR---------AGAGGDVQRLVMS 126

Query: 736 VEKDGP---------VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKL 786
                P         +P ++DWR K        Q ACGSCWAFS  G +EG   + TGKL
Sbjct: 127 GAPAAPPASQEEVSRLPASFDWRDKGAVTGVKMQGACGSCWAFSTTGAVEGANFLATGKL 186

Query: 787 VEFSKSQLVECAKQCS---------GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEK 836
           +E S+ QLV+C   CS         GC G     +  Y  ++ GL  ++ YPY  A G  
Sbjct: 187 LELSEQQLVDCDHTCSAVAQNECNNGCAGGLMTNAYAYLMKSGGLMEQRAYPYTGAPG-- 244

Query: 837 FKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRK 892
             C +D +K  +          G E  ++  L + GPL+V LN+  +  Y G    P+  
Sbjct: 245 -PCRFDPAKAAVRVANFTAVPAGDEAQIRAALVRRGPLAVGLNAAFMQTYVGGVSCPL-- 301

Query: 893 NDETCSPYDLGHAVLLVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNAC 945
               C    + H VLLVGYG +          PYW+++NSWG    ++G++++ RG+N C
Sbjct: 302 ---LCPRAWVNHGVLLVGYGARGFAALRLGYRPYWIIKNSWGERWGEQGYYRLCRGSNVC 358

Query: 946 GIEQIAGYATIDVV 959
           G++ +     +  V
Sbjct: 359 GVDSMVSAVAVAPV 372



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 160/374 (42%), Gaps = 58/374 (15%)

Query: 259 SLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK- 317
           S  D    QV     + A  G+L    E     F AF+ + GR+Y+  EE   R   F  
Sbjct: 19  STDDGFIRQVTDGRRSRAGAGALGLLPE---AQFAAFVRRHGRRYSGPEEYARRLRVFAA 75

Query: 318 -------QDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLME 369
                          R+G + FSD + EE   + TG +               V++++M 
Sbjct: 76  NLARAAAHQALDPTARHGVTPFSDLTREEFEARLTGVR---------AGAGGDVQRLVMS 126

Query: 370 VEKDGP---------VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKL 420
                P         +P ++DWR K        Q ACGSCWAFS  G +EG   + TGKL
Sbjct: 127 GAPAAPPASQEEVSRLPASFDWRDKGAVTGVKMQGACGSCWAFSTTGAVEGANFLATGKL 186

Query: 421 VEFSKSQLVECAKQCSGCG------GCDGLEQPIEYTH---QAGLESEKDYPYRNGNGEK 471
           +E S+ QLV+C   CS         GC G      Y +     GL  ++ YPY    G  
Sbjct: 187 LELSEQQLVDCDHTCSAVAQNECNNGCAGGLMTNAYAYLMKSGGLMEQRAYPY---TGAP 243

Query: 472 FKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNG---TPIRK 527
             C +D +K  +          G E  ++  L + GPL+VGLN+  +  Y G    P+  
Sbjct: 244 GPCRFDPAKAAVRVANFTAVPAGDEAQIRAALVRRGPLAVGLNAAFMQTYVGGVSCPL-- 301

Query: 528 NDETCSPYDLGHAVLLVGYGKQDDI-------PYWLARNSWGPIGPDEGFFKIERGNNAC 580
               C    + H VLLVGYG +          PYW+ +NSWG    ++G++++ RG+N C
Sbjct: 302 ---LCPRAWVNHGVLLVGYGARGFAALRLGYRPYWIIKNSWGERWGEQGYYRLCRGSNVC 358

Query: 581 GIEQIAGYATIDVV 594
           G++ +     +  V
Sbjct: 359 GVDSMVSAVAVAPV 372



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 29/239 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P ++DWR K        Q  CGSCWAFS  G +EG   + TGKL+E S+ QLV+C   C
Sbjct: 142 LPASFDWRDKGAVTGVKMQGACGSCWAFSTTGAVEGANFLATGKLLELSEQQLVDCDHTC 201

Query: 71  S---------GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           S         GC G     +  Y  ++ GL  ++ YPY  A G    C +D +K  +   
Sbjct: 202 SAVAQNECNNGCAGGLMTNAYAYLMKSGGLMEQRAYPYTGAPG---PCRFDPAKAAVRVA 258

Query: 121 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 176
                  G E  ++  L + GPL+V LN+  +  Y G    P+      C    + H VL
Sbjct: 259 NFTAVPAGDEAQIRAALVRRGPLAVGLNAAFMQTYVGGVSCPL-----LCPRAWVNHGVL 313

Query: 177 LVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVV 228
           LVGYG +          PYW+++NSWG    ++G++++ RG+N CG++ +     +  V
Sbjct: 314 LVGYGARGFAALRLGYRPYWIIKNSWGERWGEQGYYRLCRGSNVCGVDSMVSAVAVAPV 372


>gi|2765358|emb|CAA74241.1| cathepsin L [Litopenaeus vannamei]
          Length = 325

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 160/324 (49%), Gaps = 34/324 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYG-------TSEFSD 334
           ++ + ++ F  + GR+YA+ +E + R   F+Q     D H      G        ++F D
Sbjct: 17  SLRQQWQNFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 76

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EEI+          T    +    +    +++ + D  +P+  DWR K    P  DQ
Sbjct: 77  MTSEEIVA---------TMNGFLGAPTRRPAAVLKAD-DETLPEKVDWRTKGAVTPVKDQ 126

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYTH- 452
             CGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +    G   GL +Q   Y   
Sbjct: 127 KQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCSDKFRNMGCMGGLMDQAFRYIKA 186

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVG 511
             G+++E  YPY   +G   KC +D S V           +GSE+ +KK +   GP+SVG
Sbjct: 187 NKGIDTEDSYPYEAQDG---KCRFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVG 243

Query: 512 LNS--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDE 568
           +++     HFY+ T +  +D  CS   L H VL VGYG  ++   +WL +NSW     D+
Sbjct: 244 IDASQSTFHFYH-TGVYHDDH-CSSTMLDHGVLAVGYGSDENGGDFWLVKNSWNTSWGDK 301

Query: 569 GFFKIERG-NNACGIEQIAGYATI 591
           G+ K+ R  NN CGI   A Y  +
Sbjct: 302 GYIKMSRNRNNNCGIASQASYPLV 325



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 158/324 (48%), Gaps = 35/324 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYG-------TSEFSD 700
           ++ + ++ F  + GR+YA+ +E + R   F+Q     D H      G        ++F D
Sbjct: 17  SLRQQWQNFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 76

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EEI+          T    +    +    +++ + D  +P+  DWR K    P  DQ
Sbjct: 77  MTSEEIVA---------TMNGFLGAPTRRPAAVLKAD-DETLPEKVDWRTKGAVTPVKDQ 126

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH- 817
             CGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +    GC G   + +  Y   
Sbjct: 127 KQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCSDKFRNMGCMGGLMDQAFRYIKA 186

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVL 876
             G+++E  YPY+  +G   KC +D S V    TG   +       +KK +   GP+SV 
Sbjct: 187 NKGIDTEDSYPYEAQDG---KCRFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVG 243

Query: 877 LNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDE 933
           +++     H Y+ T +  +D  CS   L H VL VGYG  +N   +WLV+NSW     D+
Sbjct: 244 IDASQSTFHFYH-TGVYHDDH-CSSTMLDHGVLAVGYGSDENGGDFWLVKNSWNTSWGDK 301

Query: 934 GFFKIERG-NNACGIEQIAGYATI 956
           G+ K+ R  NN CGI   A Y  +
Sbjct: 302 GYIKMSRNRNNNCGIASQASYPLV 325



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 119/226 (52%), Gaps = 13/226 (5%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P+  DWR K    P  DQ  CGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+
Sbjct: 105 DETLPEKVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCS 164

Query: 68  KQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 123
            +    GC G   + +  Y     G+++E  YPY+  +G   KC +D S V    TG   
Sbjct: 165 DKFRNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQDG---KCRFDASNVGATDTGYVD 221

Query: 124 LHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           +       +KK +   GP+SV +++     H Y+ T +  +D  CS   L H VL VGYG
Sbjct: 222 VEHGSESALKKAVATIGPISVGIDASQSTFHFYH-TGVYHDDH-CSSTMLDHGVLAVGYG 279

Query: 182 KQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +N   +WLV+NSW     D+G+ K+ R  NN CGI   A Y  +
Sbjct: 280 SDENGGDFWLVKNSWNTSWGDKGYIKMSRNRNNNCGIASQASYPLV 325



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D G+  +E G+ +   + +A    I V               V +D+ CS   L H VL 
Sbjct: 216  DTGYVDVEHGSESALKKAVATIGPISVGIDASQSTFHFYHTGVYHDDHCSSTMLDHGVLA 275

Query: 977  VGYGKQDDI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG  ++   +WLV+NSW     D+G+ K+ R  NN CGI   A Y  +
Sbjct: 276  VGYGSDENGGDFWLVKNSWNTSWGDKGYIKMSRNRNNNCGIASQASYPLV 325


>gi|359492179|ref|XP_002280808.2| PREDICTED: cysteine proteinase RD19a-like [Vitis vinifera]
 gi|302142580|emb|CBI19783.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 156/353 (44%), Gaps = 56/353 (15%)

Query: 626 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 685
           L D +  QVV+  D L     L+ ++      F AF  +  + YA  EE   RF  FK +
Sbjct: 30  LDDLLIRQVVSNSDDL-----LSAEHH-----FAAFKARFRKTYATAEEHDYRFSIFKAN 79

Query: 686 GHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 737
             +            +G + FSD +P E           + Y  +   R  ++     + 
Sbjct: 80  LRRAKRNQLLDPSAVHGVTRFSDLTPAEF---------RQNYLGLKPLRFPIDTQQAPIL 130

Query: 738 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 797
               +P  +DWR         DQ  CGSCW+FS  G LEG + + TG LV  S+ QLV+C
Sbjct: 131 PTNDLPTDFDWRDHGAVTAVKDQGECGSCWSFSTTGALEGAHFLATGNLVSLSEQQLVDC 190

Query: 798 AKQCS---------GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVK 847
             +C          GC+G     + EY  +A G+   +DYPY   +G    C +DK+K+ 
Sbjct: 191 DHECDPEEYGACDRGCNGGLMNTAFEYILKAGGVVRGEDYPYTGTDGH---CKFDKTKIA 247

Query: 848 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGH 904
                        + +   L K GPL+V +N+  +  Y G    P       CS   L H
Sbjct: 248 ASVSNFSTVSIDEDQIAANLVKNGPLAVGINAIFMQSYAGGVSCPF-----ICST-SLNH 301

Query: 905 AVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
            VLLVGYG            PYWL++NSWG    + G++KI RG+N CG++ +
Sbjct: 302 GVLLVGYGSAGYSPIRFKEKPYWLLKNSWGQNWGEHGYYKICRGHNICGVDSM 354



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 158/353 (44%), Gaps = 55/353 (15%)

Query: 260 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 319
           L D +  QVV+  D L     L+ ++      F AF  +  + YA  EE   RF  FK +
Sbjct: 30  LDDLLIRQVVSNSDDL-----LSAEHH-----FAAFKARFRKTYATAEEHDYRFSIFKAN 79

Query: 320 GHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 371
             +            +G + FSD +P E           + Y  +   R  ++     + 
Sbjct: 80  LRRAKRNQLLDPSAVHGVTRFSDLTPAEF---------RQNYLGLKPLRFPIDTQQAPIL 130

Query: 372 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 431
               +P  +DWR         DQ  CGSCW+FS  G LEG + + TG LV  S+ QLV+C
Sbjct: 131 PTNDLPTDFDWRDHGAVTAVKDQGECGSCWSFSTTGALEGAHFLATGNLVSLSEQQLVDC 190

Query: 432 AKQC-----SGCG-GCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVK 482
             +C       C  GC+G  +    EY  +A G+   +DYPY   +G    C +DK+K+ 
Sbjct: 191 DHECDPEEYGACDRGCNGGLMNTAFEYILKAGGVVRGEDYPYTGTDGH---CKFDKTKIA 247

Query: 483 LFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG---TPIRKNDETCSPYDLGH 539
                        + +   L K GPL+VG+N+  +  Y G    P       CS   L H
Sbjct: 248 ASVSNFSTVSIDEDQIAANLVKNGPLAVGINAIFMQSYAGGVSCPF-----ICST-SLNH 301

Query: 540 AVLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
            VLLVGYG          + PYWL +NSWG    + G++KI RG+N CG++ +
Sbjct: 302 GVLLVGYGSAGYSPIRFKEKPYWLLKNSWGQNWGEHGYYKICRGHNICGVDSM 354



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 113/229 (49%), Gaps = 29/229 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         DQ +CGSCW+FS  G LEG + + TG LV  S+ QLV+C  +C
Sbjct: 135 LPTDFDWRDHGAVTAVKDQGECGSCWSFSTTGALEGAHFLATGNLVSLSEQQLVDCDHEC 194

Query: 71  S---------GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                     GC+G     + EY  +A G+   +DYPY   +G    C +DK+K+     
Sbjct: 195 DPEEYGACDRGCNGGLMNTAFEYILKAGGVVRGEDYPYTGTDGH---CKFDKTKIAASVS 251

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLL 177
                    + +   L K GPL+V +N+  +  Y G    P       CS   L H VLL
Sbjct: 252 NFSTVSIDEDQIAANLVKNGPLAVGINAIFMQSYAGGVSCPF-----ICST-SLNHGVLL 305

Query: 178 VGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           VGYG            PYWL++NSWG    + G++KI RG+N CG++ +
Sbjct: 306 VGYGSAGYSPIRFKEKPYWLLKNSWGQNWGEHGYYKICRGHNICGVDSM 354



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 24/112 (21%)

Query: 914  QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHA 973
            +D I   LV+N  GP+           G NA  ++  AG  +   +     CS   L H 
Sbjct: 260  EDQIAANLVKN--GPLAV---------GINAIFMQSYAGGVSCPFI-----CST-SLNHG 302

Query: 974  VLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            VLLVGYG          + PYWL++NSWG    + G++KI RG+N CG++ +
Sbjct: 303  VLLVGYGSAGYSPIRFKEKPYWLLKNSWGQNWGEHGYYKICRGHNICGVDSM 354


>gi|6649575|gb|AAF21461.1|U69120_1 cysteine proteinase PWCP1 [Paragonimus westermani]
          Length = 427

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 149/317 (47%), Gaps = 40/317 (12%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRS 336
           +N    F+ F  K  + Y++D    +R+  FK         Q   K    YG ++FSD S
Sbjct: 121 QNTSRLFEEFQRKFRKSYSSD--TAKRYALFKYNLLKMQLIQRLEKGTANYGITKFSDLS 178

Query: 337 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
            EE      F+ S    +R  +   ++E  +        +P ++DWR         DQ  
Sbjct: 179 AEE------FRHSLANMKRRKSKGSQMETAIFPTTIQS-LPPSFDWRANGAVTEVKDQGM 231

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI--EYTHQA 454
           CGSCWAF+  G +EGQ+  KT KL+  S+ QL++C  +   C G  GL +    E     
Sbjct: 232 CGSCWAFATTGNIEGQWFRKTNKLISLSEQQLLDCDTKDEACNG--GLPEWAYDEIVKMG 289

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKK-------ILYKYGP 507
           GL SEKDYPY          A  +    L       Y NGS T+          L + GP
Sbjct: 290 GLMSEKDYPYE---------AMKEQSCHLRRPNISAYINGSATLPSDEAKLAAWLVQNGP 340

Query: 508 LSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI--PYWLARNSWGPIG 565
           +SVG+N++ + FY G         CS   L HAVLLVGYG    +  PYW+ +NSWG   
Sbjct: 341 ISVGVNANFLQFYLGGISHPPHMLCSEAGLDHAVLLVGYGVSTFLRRPYWIVKNSWGGGW 400

Query: 566 PDEGFFKIERGNNACGI 582
            ++G+F++ RG+  CGI
Sbjct: 401 GEKGYFRMYRGDGTCGI 417



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 147/308 (47%), Gaps = 23/308 (7%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRS 702
           +N    F+ F  K  + Y++D    +R+  FK         Q   K    YG ++FSD S
Sbjct: 121 QNTSRLFEEFQRKFRKSYSSD--TAKRYALFKYNLLKMQLIQRLEKGTANYGITKFSDLS 178

Query: 703 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
            EE      F+ S    +R  +   ++E  +        +P ++DWR         DQ  
Sbjct: 179 AEE------FRHSLANMKRRKSKGSQMETAIFPTTIQS-LPPSFDWRANGAVTEVKDQGM 231

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGL 821
           CGSCWAF+  G +EGQ+  KT KL+  S+ QL++C  +   C+G   E +  E     GL
Sbjct: 232 CGSCWAFATTGNIEGQWFRKTNKLISLSEQQLLDCDTKDEACNGGLPEWAYDEIVKMGGL 291

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
            SEKDYPY+    +   C   +  +  +        +    +   L + GP+SV +N++ 
Sbjct: 292 MSEKDYPYEAMKEQ--SCHLRRPNISAYINGSATLPSDEAKLAAWLVQNGPISVGVNANF 349

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI--PYWLVRNSWGPIGPDEGFFKIE 939
           +  Y G         CS   L HAVLLVGYG    +  PYW+V+NSWG    ++G+F++ 
Sbjct: 350 LQFYLGGISHPPHMLCSEAGLDHAVLLVGYGVSTFLRRPYWIVKNSWGGGWGEKGYFRMY 409

Query: 940 RGNNACGI 947
           RG+  CGI
Sbjct: 410 RGDGTCGI 417



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 109/209 (52%), Gaps = 5/209 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P ++DWR         DQ  CGSCWAF+  G +EGQ+  KT KL+  S+ QL++C  + 
Sbjct: 211 LPPSFDWRANGAVTEVKDQGMCGSCWAFATTGNIEGQWFRKTNKLISLSEQQLLDCDTKD 270

Query: 71  SGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
             C+G   E +  E     GL SEKDYPY+    +   C   +  +  +        +  
Sbjct: 271 EACNGGLPEWAYDEIVKMGGLMSEKDYPYEAMKEQ--SCHLRRPNISAYINGSATLPSDE 328

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI--P 187
             +   L + GP+SV +N++ +  Y G         CS   L HAVLLVGYG    +  P
Sbjct: 329 AKLAAWLVQNGPISVGVNANFLQFYLGGISHPPHMLCSEAGLDHAVLLVGYGVSTFLRRP 388

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           YW+V+NSWG    ++G+F++ RG+  CGI
Sbjct: 389 YWIVKNSWGGGWGEKGYFRMYRGDGTCGI 417


>gi|33333694|gb|AAQ11965.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 161/323 (49%), Gaps = 33/323 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 334
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +  G  GC G  + Q  ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQ 190

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             G+++E+ YPY    G +  C   KS   +   K +++    + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 513 NSHLIHFYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +  + FY+   +   DE C       DL H VL+VGYG ++ + YW+ +NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DEKCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+F++++   ACGI+    Y  +
Sbjct: 303 GYFRLKKDVKACGIDYYNTYPIL 325



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 160/323 (49%), Gaps = 34/323 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 700
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFEPSIEYTH 817
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +    +GC G     + ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQ 190

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             G+++E+ YPY+   G +  C   KS   +   K ++     + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 878 NSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +  +  Y+   +   DE C       DL H VL+VGYG ++ + YW+V+NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DEKCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+F++++   ACGI+    Y  +
Sbjct: 303 GYFRLKKDVKACGIDYYNTYPIL 325



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 120/220 (54%), Gaps = 15/220 (6%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 69
           DA DWR++    P  DQA+CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +   
Sbjct: 114 DAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYG 173

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K ++     
Sbjct: 174 NNGCRGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDE 228

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDN 185
           + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VGYG ++ 
Sbjct: 229 QEMARTVAAKGPVAVAIEASQLSFYDKGIV---DEKCRCSNKREDLNHGVLVVGYGSENG 285

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           + YW+V+NSWG    ++G+F++++   ACGI+    Y  +
Sbjct: 286 VDYWIVKNSWGADWGEKGYFRLKKDVKACGIDYYNTYPIL 325



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 38/56 (67%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            DL H VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI+    Y  +
Sbjct: 270  DLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIDYYNTYPIL 325


>gi|16506813|gb|AAL23961.1|AF426247_1 cathepsin H [Homo sapiens]
          Length = 335

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 153/314 (48%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNYGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD  +      E M + +  Y P+S    +  D 
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IE
Sbjct: 260 MMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIE 316

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 317 RGKNMCGLAACASY 330



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 150/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNYGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G    C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 MMYRTGIYSSTSCHK-----TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 174 QDFNNYGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVA 229

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 230 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAV 286

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 287 GYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|56755191|gb|AAW25775.1| SJCHGC00511 protein [Schistosoma japonicum]
          Length = 454

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 150/318 (47%), Gaps = 27/318 (8%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRS 336
           EN+ E +  F +   +QY ++ + ++RF  FK +  K       ER    YG + +SD +
Sbjct: 151 ENVGEMYAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLT 209

Query: 337 PEEILCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            +E   +T     W   +    ++ R +V          G +P+ +DWR+K       +Q
Sbjct: 210 TDE-FSRTHLTAPWRASSKRNTISPRREV----------GDIPNNFDWREKGAVTEVKNQ 258

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQA 454
             CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC G              
Sbjct: 259 GMCGSCWAFSTTGNIESQWFRKTGKLLSLSEQQLVDCDSLDDGCNGGLPSNAYESIIRMG 318

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E +YPY   N    KC    + V  +             +   LY +  +SVG+N+
Sbjct: 319 GLMLEDNYPYDAKNE---KCHLKVANVAAYINSSVNLTQDESELAIWLYHHSAISVGMNA 375

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIPYWLARNSWGPIGPDEGFFKI 573
            L+ FY           CS Y L HAVLLVGYG  + + P+W+ +NSWG    ++G+F++
Sbjct: 376 LLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGEKGYFRM 435

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+  CGI   A  A I
Sbjct: 436 YRGDGTCGINTDATSALI 453



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 153/320 (47%), Gaps = 32/320 (10%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRS 702
           EN+ E +  F +   +QY ++ + ++RF  FK +  K       ER    YG + +SD +
Sbjct: 151 ENVGEMYAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLT 209

Query: 703 PEEILCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            +E   +T     W   +    ++ R +V          G +P+ +DWR+K       +Q
Sbjct: 210 TDE-FSRTHLTAPWRASSKRNTISPRREV----------GDIPNNFDWREKGAVTEVKNQ 258

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---TH 817
             CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC+G    PS  Y     
Sbjct: 259 GMCGSCWAFSTTGNIESQWFRKTGKLLSLSEQQLVDCDSLDDGCNGGL--PSNAYESIIR 316

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             GL  E +YPY   N    KC    + V  +             +   LY +  +SV +
Sbjct: 317 MGGLMLEDNYPYDAKNE---KCHLKVANVAAYINSSVNLTQDESELAIWLYHHSAISVGM 373

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFF 936
           N+ L+  Y           CS Y L HAVLLVGYG  + N P+W+V+NSWG    ++G+F
Sbjct: 374 NALLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGEKGYF 433

Query: 937 KIERGNNACGIEQIAGYATI 956
           ++ RG+  CGI   A  A I
Sbjct: 434 RMYRGDGTCGINTDATSALI 453



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 112/221 (50%), Gaps = 9/221 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P+ +DWR+K       +Q  CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C  
Sbjct: 238 GDIPNNFDWREKGAVTEVKNQGMCGSCWAFSTTGNIESQWFRKTGKLLSLSEQQLVDCDS 297

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC+G    PS  Y       GL  E +YPY   N    KC    + V  +       
Sbjct: 298 LDDGCNGGL--PSNAYESIIRMGGLMLEDNYPYDAKNE---KCHLKVANVAAYINSSVNL 352

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQD 184
                 +   LY +  +SV +N+ L+  Y           CS Y L HAVLLVGYG  + 
Sbjct: 353 TQDESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSEK 412

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           N P+W+V+NSWG    ++G+F++ RG+  CGI   A  A I
Sbjct: 413 NEPFWIVKNSWGVEWGEKGYFRMYRGDGTCGINTDATSALI 453


>gi|29710|emb|CAA34734.1| unnamed protein product [Homo sapiens]
          Length = 335

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 153/314 (48%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNYGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD  +      E M + +  Y P+S    +  D 
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IE
Sbjct: 260 MMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIE 316

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 317 RGKNMCGLAACASY 330



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 150/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNYGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G    C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 MMYRTGIYSSTSCHK-----TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 174 QDFNNYGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVA 229

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 230 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAV 286

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 287 GYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|294462776|gb|ADE76932.1| unknown [Picea sitchensis]
          Length = 403

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 186/409 (45%), Gaps = 67/409 (16%)

Query: 584 QIAGYATIDVVIQRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQV---VARVDT 640
           ++A +A I ++I   +      +L+        +A C+ L  ++ +I+  +     RV  
Sbjct: 14  RVASFAVISILIISSMAGYNTNLLV--------LAGCMFLLVISTQISFSLGLDNGRVSE 65

Query: 641 LAIEGSLT--FDNENILET-----FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 692
                 +T  F+ E++L       F  FIV+ G+ Y+  EE   R   F+++  K  E  
Sbjct: 66  GGFIAQVTEKFNREHLLNLRSKTLFDKFIVEHGKVYSTIEEYVRRLRIFEKNLLKAAENQ 125

Query: 693 -------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV--EKMLMEVEKDGPVP 743
                  +G + FSD +  E          E  Y  ++  R+ +  EK   E+     +P
Sbjct: 126 ALDPTAVHGITPFSDLTEYEF---------ESRYTGLLGVRQGLVNEKQTAEILPVDDLP 176

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-- 801
             +DWR+K        Q  CGSCWAFS  G++EG   + TGKL+  S+ QL++C  +C  
Sbjct: 177 ANFDWREKGAVTEVKTQGNCGSCWAFSTTGVVEGANFLATGKLLNLSEQQLIDCDHKCDP 236

Query: 802 -------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGK 852
                  +GC G     +  Y  +A G+E  K+YPY    G+ KF       K   FT  
Sbjct: 237 LNTKACDNGCHGGLMTNAYNYLMEAGGIEEAKNYPYTGVQGDCKFNPDLAAVKAINFTTV 296

Query: 853 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLV 909
           +       + +   L K+GPL+V LN+  +  Y G    P+      CS   + H VLLV
Sbjct: 297 NL----DEKQIAANLVKHGPLAVGLNAAFMQTYIGGVSCPL-----ICSKRFINHGVLLV 347

Query: 910 GYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 951
           GYG +          PYW+++NSWG    + G++K+ RG+  CG+ ++ 
Sbjct: 348 GYGHKGFALLRLGYRPYWIIKNSWGKRWGEHGYYKLCRGHGECGMNKMV 396



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 186/409 (45%), Gaps = 66/409 (16%)

Query: 218 QIAGYATIDVVIQRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQV---VARVDT 274
           ++A +A I ++I   +      +L+        +A C+ L  ++ +I+  +     RV  
Sbjct: 14  RVASFAVISILIISSMAGYNTNLLV--------LAGCMFLLVISTQISFSLGLDNGRVSE 65

Query: 275 LAIEGSLT--FDNENILET-----FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 326
                 +T  F+ E++L       F  FIV+ G+ Y+  EE   R   F+++  K  E  
Sbjct: 66  GGFIAQVTEKFNREHLLNLRSKTLFDKFIVEHGKVYSTIEEYVRRLRIFEKNLLKAAENQ 125

Query: 327 -------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV--EKMLMEVEKDGPVP 377
                  +G + FSD +  E          E  Y  ++  R+ +  EK   E+     +P
Sbjct: 126 ALDPTAVHGITPFSDLTEYEF---------ESRYTGLLGVRQGLVNEKQTAEILPVDDLP 176

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-- 435
             +DWR+K        Q  CGSCWAFS  G++EG   + TGKL+  S+ QL++C  +C  
Sbjct: 177 ANFDWREKGAVTEVKTQGNCGSCWAFSTTGVVEGANFLATGKLLNLSEQQLIDCDHKCDP 236

Query: 436 ---SGC-GGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGE-KFKCAYDKSKVKLFTGK 487
                C  GC G  +     Y  +A G+E  K+YPY    G+ KF       K   FT  
Sbjct: 237 LNTKACDNGCHGGLMTNAYNYLMEAGGIEEAKNYPYTGVQGDCKFNPDLAAVKAINFTTV 296

Query: 488 DFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLV 544
           +       + +   L K+GPL+VGLN+  +  Y G    P+      CS   + H VLLV
Sbjct: 297 NL----DEKQIAANLVKHGPLAVGLNAAFMQTYIGGVSCPL-----ICSKRFINHGVLLV 347

Query: 545 GYGKQDDI-------PYWLARNSWGPIGPDEGFFKIERGNNACGIEQIA 586
           GYG +          PYW+ +NSWG    + G++K+ RG+  CG+ ++ 
Sbjct: 348 GYGHKGFALLRLGYRPYWIIKNSWGKRWGEHGYYKLCRGHGECGMNKMV 396



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 116/231 (50%), Gaps = 30/231 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K        Q +CGSCWAFS  G++EG   + TGKL+  S+ QL++C  +C
Sbjct: 175 LPANFDWREKGAVTEVKTQGNCGSCWAFSTTGVVEGANFLATGKLLNLSEQQLIDCDHKC 234

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE-KFKCAYDKSKVKLFT 119
                    +GC G     +  Y  +A G+E  K+YPY    G+ KF       K   FT
Sbjct: 235 DPLNTKACDNGCHGGLMTNAYNYLMEAGGIEEAKNYPYTGVQGDCKFNPDLAAVKAINFT 294

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 176
             +       + +   L K+GPL+V LN+  +  Y G    P+      CS   + H VL
Sbjct: 295 TVNL----DEKQIAANLVKHGPLAVGLNAAFMQTYIGGVSCPL-----ICSKRFINHGVL 345

Query: 177 LVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           LVGYG +          PYW+++NSWG    + G++K+ RG+  CG+ ++ 
Sbjct: 346 LVGYGHKGFALLRLGYRPYWIIKNSWGKRWGEHGYYKLCRGHGECGMNKMV 396



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLV 990
            ++ G  A G+        I  V     CS   + H VLLVGYG +          PYW++
Sbjct: 308  VKHGPLAVGLNAAFMQTYIGGVSCPLICSKRFINHGVLLVGYGHKGFALLRLGYRPYWII 367

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQIA 1019
            +NSWG    + G++K+ RG+  CG+ ++ 
Sbjct: 368  KNSWGKRWGEHGYYKLCRGHGECGMNKMV 396


>gi|23110955|ref|NP_004381.2| pro-cathepsin H preproprotein [Homo sapiens]
 gi|288558851|sp|P09668.4|CATH_HUMAN RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|119619549|gb|EAW99143.1| cathepsin H [Homo sapiens]
          Length = 335

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 153/314 (48%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD  +      E M + +  Y P+S    +  D 
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IE
Sbjct: 260 MMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIE 316

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 317 RGKNMCGLAACASY 330



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 150/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G    C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 MMYRTGIYSSTSCHK-----TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 174 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVA 229

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 230 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAV 286

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 287 GYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|61372279|gb|AAX43816.1| cathepsin H [synthetic construct]
          Length = 336

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 153/314 (48%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD  +      E M + +  Y P+S    +  D 
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IE
Sbjct: 260 MMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIE 316

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 317 RGKNMCGLAACASY 330



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 150/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G    C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 MMYRTGIYSSTSCHK-----TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 174 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVA 229

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 230 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAV 286

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 287 GYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|60827884|gb|AAX36817.1| cathepsin H [synthetic construct]
          Length = 336

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 153/314 (48%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD  +      E M + +  Y P+S    +  D 
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IE
Sbjct: 260 MMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIE 316

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 317 RGKNMCGLAACASY 330



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 150/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G    C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 MMYRTGIYSSTSCHK-----TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 174 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVA 229

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 230 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAV 286

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 287 GYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|268581031|ref|XP_002645498.1| Hypothetical protein CBG22748 [Caenorhabditis briggsae]
          Length = 379

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 168/358 (46%), Gaps = 50/358 (13%)

Query: 607 LIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRG 666
           +I AVFL+  + S   L  +  R T     R + L                F  F+ K  
Sbjct: 45  VILAVFLIFVLFSSCALREMGKRKT--ATQRYEVL----------------FDEFLYKFN 86

Query: 667 RQYANDEEIKERFEYFK------QDGHKKHE--RYGTSEFSDRSPEEILCKTGFKWSERT 718
           R Y++ EE K R+  F       ++  +KH    +  +EF+D             WSE  
Sbjct: 87  RLYSSQEEYKYRYHIFVHNVREFEEEERKHPGLDFDINEFTD-------------WSEEE 133

Query: 719 YERIVADREKVEKMLMEVEKDGPV-------PDAWDWRKKNVTGPAGDQAACGSCWAFSI 771
             +++ D++ V++    V  +G V       P + DWR +    P  +Q  CGSCWAF+ 
Sbjct: 134 LRKMIVDKKNVKEEKNAVRFEGSVLSSGIKRPASIDWRDQGKLTPIKNQGQCGSCWAFAT 193

Query: 772 AGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKN 831
              +E Q+AIK G LV  S+ ++V+C  + +GC G +   ++ +  + GLE+EK YPY  
Sbjct: 194 VAAIEAQHAIKKGILVSLSEQEMVDCDGRNNGCSGGYRPYAMRFVKENGLETEKSYPYSA 253

Query: 832 ANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPI 890
              +  +C   ++  K++     +     E +   +   GP++  +N    ++ Y     
Sbjct: 254 LKHD--QCMLHQNDTKVYIDDYRMLSTSEENIADWVGTKGPVTFGMNVVKAMYSYRSGIF 311

Query: 891 RKNDETCSPYDLG-HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
             + E C+   +G HA+ +VGYG +    YW+V+NSWG     +G+F++ RG N+CG+
Sbjct: 312 NPSAEDCAEKSMGAHALTIVGYGGEGTSAYWIVKNSWGTSWGSDGYFRLARGVNSCGL 369



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 166/359 (46%), Gaps = 51/359 (14%)

Query: 241 LIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRG 300
           +I AVFL+  + S   L  +  R T     R + L                F  F+ K  
Sbjct: 45  VILAVFLIFVLFSSCALREMGKRKT--ATQRYEVL----------------FDEFLYKFN 86

Query: 301 RQYANDEEIKERFEYFK------QDGHKKHE--RYGTSEFSDRSPEEILCKTGFKWSERT 352
           R Y++ EE K R+  F       ++  +KH    +  +EF+D             WSE  
Sbjct: 87  RLYSSQEEYKYRYHIFVHNVREFEEEERKHPGLDFDINEFTD-------------WSEEE 133

Query: 353 YERIVADREKVEKMLMEVEKDGPV-------PDAWDWRKKNVTGPAGDQAACGSCWAFSI 405
             +++ D++ V++    V  +G V       P + DWR +    P  +Q  CGSCWAF+ 
Sbjct: 134 LRKMIVDKKNVKEEKNAVRFEGSVLSSGIKRPASIDWRDQGKLTPIKNQGQCGSCWAFAT 193

Query: 406 AGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYR 465
              +E Q+AIK G LV  S+ ++V+C  + +GC G       + +  + GLE+EK YPY 
Sbjct: 194 VAAIEAQHAIKKGILVSLSEQEMVDCDGRNNGCSG-GYRPYAMRFVKENGLETEKSYPYS 252

Query: 466 NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN-SHLIHFYNGTP 524
               +  +C   ++  K++     +     E +   +   GP++ G+N    ++ Y    
Sbjct: 253 ALKHD--QCMLHQNDTKVYIDDYRMLSTSEENIADWVGTKGPVTFGMNVVKAMYSYRSGI 310

Query: 525 IRKNDETCSPYDLG-HAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
              + E C+   +G HA+ +VGYG +    YW+ +NSWG     +G+F++ RG N+CG+
Sbjct: 311 FNPSAEDCAEKSMGAHALTIVGYGGEGTSAYWIVKNSWGTSWGSDGYFRLARGVNSCGL 369



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 4/207 (1%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P + DWR +    P  +Q  CGSCWAF+    +E Q+AIK G LV  S+ ++V+C  + +
Sbjct: 165 PASIDWRDQGKLTPIKNQGQCGSCWAFATVAAIEAQHAIKKGILVSLSEQEMVDCDGRNN 224

Query: 72  GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           GC G +   ++ +  + GLE+EK YPY     +  +C   ++  K++     +     E 
Sbjct: 225 GCSGGYRPYAMRFVKENGLETEKSYPYSALKHD--QCMLHQNDTKVYIDDYRMLSTSEEN 282

Query: 132 MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYW 189
           +   +   GP++  +N    ++ Y       + E C+   +G HA+ +VGYG +    YW
Sbjct: 283 IADWVGTKGPVTFGMNVVKAMYSYRSGIFNPSAEDCAEKSMGAHALTIVGYGGEGTSAYW 342

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGI 216
           +V+NSWG     +G+F++ RG N+CG+
Sbjct: 343 IVKNSWGTSWGSDGYFRLARGVNSCGL 369


>gi|33333704|gb|AAQ11970.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 161/323 (49%), Gaps = 33/323 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 334
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAIDWREEGAVTPVKDQ 130

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +  G  GC G  + Q  ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             G+++E+ YPY    G +  C   KS   +   K +++    + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 513 NSHLIHFYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +  + FY+   +   DE C       DL H VL+VGYG ++ + YW+ +NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+F++++   ACGI     Y  +
Sbjct: 303 GYFRLKKDVKACGIGTYNTYPVL 325



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 160/323 (49%), Gaps = 34/323 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 700
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAIDWREEGAVTPVKDQ 130

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFEPSIEYTH 817
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +    +GC G     + ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             G+++E+ YPY+   G +  C   KS   +   K ++     + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 878 NSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +  +  Y+   +   DE C       DL H VL+VGYG ++ + YW+V+NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+F++++   ACGI     Y  +
Sbjct: 303 GYFRLKKDVKACGIGTYNTYPVL 325



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 119/220 (54%), Gaps = 15/220 (6%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 69
           DA DWR++    P  DQA+CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +   
Sbjct: 114 DAIDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYG 173

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K ++     
Sbjct: 174 NNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDE 228

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDN 185
           + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VGYG ++ 
Sbjct: 229 QEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENG 285

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           + YW+V+NSWG    ++G+F++++   ACGI     Y  +
Sbjct: 286 VDYWIVKNSWGADWGEKGYFRLKKDVKACGIGTYNTYPVL 325



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 37/56 (66%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            DL H VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI     Y  +
Sbjct: 270  DLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIGTYNTYPVL 325


>gi|387915132|gb|AFK11175.1| cathspsin H [Callorhinchus milii]
          Length = 330

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 151/316 (47%), Gaps = 34/316 (10%)

Query: 655 LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEI 706
           + +FK ++ +  + Y++ EE   R   F Q+  K  E        R G ++FSD +  E 
Sbjct: 27  IVSFKTWMTQHNKHYSS-EEYSYRLRTFIQNKRKVEEHNSGRHSYRMGLNQFSDMTFSE- 84

Query: 707 LCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAAC 763
                FK  +  R  +   A R         V   GP PD  DWR K N   P  +Q  C
Sbjct: 85  -----FKKLYLLREPQNCSATRGN------HVLSMGPYPDFVDWRTKGNYVTPVKNQGGC 133

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCDGCFFEPSIEYT-HQAG 820
           GSCW FS  G LE   AIKTGKL+  ++ QLV+CA   +  GC+G     + EY  +  G
Sbjct: 134 GSCWTFSTTGCLESAIAIKTGKLLSLAEQQLVDCAGAYKNHGCNGGLPSQAFEYIKYNGG 193

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGK--DFLHFNGSETMKKILYKYGPLSVLLN 878
           LE+EKDYPY     +   C Y  +K   F  +  +   ++ +  +  +  +  P+S+   
Sbjct: 194 LEAEKDYPY---TAQDQHCQYQPNKAVAFVKEVVNITQYDENGIVDAVA-RLNPVSIAFE 249

Query: 879 -SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
            +D    Y G     ++   +P  + HAVL VGYG Q+   YW+V+NSWGP     G+F 
Sbjct: 250 VTDDFFQYEGGVYSNSNCDSTPDKVNHAVLAVGYGVQNGTKYWIVKNSWGPEWGLNGYFY 309

Query: 938 IERGNNACGIEQIAGY 953
           I RG N CG+     Y
Sbjct: 310 IIRGKNMCGLAACPSY 325



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 144/315 (45%), Gaps = 31/315 (9%)

Query: 289 LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEI 340
           + +FK ++ +  + Y++ EE   R   F Q+  K  E        R G ++FSD +  E 
Sbjct: 27  IVSFKTWMTQHNKHYSS-EEYSYRLRTFIQNKRKVEEHNSGRHSYRMGLNQFSDMTFSE- 84

Query: 341 LCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAAC 397
                FK  +  R  +   A R         V   GP PD  DWR K N   P  +Q  C
Sbjct: 85  -----FKKLYLLREPQNCSATRGN------HVLSMGPYPDFVDWRTKGNYVTPVKNQGGC 133

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAG 455
           GSCW FS  G LE   AIKTGKL+  ++ QLV+CA      G   GL  Q  EY  +  G
Sbjct: 134 GSCWTFSTTGCLESAIAIKTGKLLSLAEQQLVDCAGAYKNHGCNGGLPSQAFEYIKYNGG 193

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNS 514
           LE+EKDYPY     +   C Y  +K   F  +        E  +   + +  P+S+    
Sbjct: 194 LEAEKDYPY---TAQDQHCQYQPNKAVAFVKEVVNITQYDENGIVDAVARLNPVSIAFEV 250

Query: 515 HLIHF-YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
               F Y G     ++   +P  + HAVL VGYG Q+   YW+ +NSWGP     G+F I
Sbjct: 251 TDDFFQYEGGVYSNSNCDSTPDKVNHAVLAVGYGVQNGTKYWIVKNSWGPEWGLNGYFYI 310

Query: 574 ERGNNACGIEQIAGY 588
            RG N CG+     Y
Sbjct: 311 IRGKNMCGLAACPSY 325



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 115/221 (52%), Gaps = 11/221 (4%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP PD  DWR K N   P  +Q  CGSCW FS  G LE   AIKTGKL+  ++ QLV+CA
Sbjct: 109 GPYPDFVDWRTKGNYVTPVKNQGGCGSCWTFSTTGCLESAIAIKTGKLLSLAEQQLVDCA 168

Query: 68  K--QCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK--D 122
              +  GC+G     + EY  +  GLE+EKDYPY     +   C Y  +K   F  +  +
Sbjct: 169 GAYKNHGCNGGLPSQAFEYIKYNGGLEAEKDYPY---TAQDQHCQYQPNKAVAFVKEVVN 225

Query: 123 FLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
              ++ +  +  +  +  P+S+    +D    Y G     ++   +P  + HAVL VGYG
Sbjct: 226 ITQYDENGIVDAVA-RLNPVSIAFEVTDDFFQYEGGVYSNSNCDSTPDKVNHAVLAVGYG 284

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
            Q+   YW+V+NSWGP     G+F I RG N CG+     Y
Sbjct: 285 VQNGTKYWIVKNSWGPEWGLNGYFYIIRGKNMCGLAACPSY 325



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V ++  C  +P  + HAVL VGYG Q+   YW+V+NSWGP     G+F I RG N CG+ 
Sbjct: 261  VYSNSNCDSTPDKVNHAVLAVGYGVQNGTKYWIVKNSWGPEWGLNGYFYIIRGKNMCGLA 320

Query: 1017 QIAGY 1021
                Y
Sbjct: 321  ACPSY 325


>gi|114658412|ref|XP_001153217.1| PREDICTED: pro-cathepsin H isoform 6 [Pan troglodytes]
 gi|397478882|ref|XP_003810764.1| PREDICTED: pro-cathepsin H [Pan paniscus]
 gi|12803323|gb|AAH02479.1| Cathepsin H [Homo sapiens]
 gi|60655259|gb|AAX32193.1| cathepsin H [synthetic construct]
 gi|123979560|gb|ABM81609.1| cathepsin H [synthetic construct]
 gi|123994193|gb|ABM84698.1| cathepsin H [synthetic construct]
 gi|189054474|dbj|BAG37247.1| unnamed protein product [Homo sapiens]
 gi|410254318|gb|JAA15126.1| cathepsin H [Pan troglodytes]
 gi|410294916|gb|JAA26058.1| cathepsin H [Pan troglodytes]
 gi|410331109|gb|JAA34501.1| cathepsin H [Pan troglodytes]
          Length = 335

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 153/314 (48%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD  +      E M + +  Y P+S    +  D 
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IE
Sbjct: 260 MMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIE 316

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 317 RGKNMCGLAACASY 330



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 150/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G    C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 MMYRTGIYSSTSCHK-----TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 174 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVA 229

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 230 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAV 286

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 287 GYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|14349349|gb|AAC38833.2| cysteine protease [Leishmania chagasi]
          Length = 353

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 155/340 (45%), Gaps = 31/340 (9%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 685
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 17  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 76

Query: 686 GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 740
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 77  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 132

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
                 DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C   
Sbjct: 133 ------DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNI 186

Query: 801 CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
             GC+G   + ++++    H   + +E  YPY +A G +  C +D   V           
Sbjct: 187 DDGCNGGLMQQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIAGYMSLP 245

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 917
           +  E +   + K GP++V +++     Y G  +      C    L H VL+VG+ +Q   
Sbjct: 246 HDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAKP 301

Query: 918 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           PYW+V+NSWG    ++G+ ++  G+N C ++  A  ATID
Sbjct: 302 PYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATID 341



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 153/341 (44%), Gaps = 32/341 (9%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 319
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 17  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 76

Query: 320 GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 374
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 77  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 132

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
                 DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C   
Sbjct: 133 ------DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNI 186

Query: 435 CSGCGGCDGLEQPIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY 491
             GC G   ++Q +++    H   + +E  YPY +  G +  C +D   V          
Sbjct: 187 DDGCNG-GLMQQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIAGYMSL 244

Query: 492 FNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
            +  E +   + K GP++V +++     Y G  +      C    L H VL+VG+ +Q  
Sbjct: 245 PHDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAK 300

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
            PYW+ +NSWG    ++G+ ++  G+N C ++  A  ATID
Sbjct: 301 PPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATID 341



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 8/214 (3%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C     GC+G
Sbjct: 133 DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNIDDGCNG 192

Query: 76  CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 132
              + ++++    H   + +E  YPY +A G +  C +D   V           +  E +
Sbjct: 193 GLMQQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIAGYMSLPHDEEEI 251

Query: 133 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 192
              + K GP++V +++     Y G  +      C    L H VL+VG+ +Q   PYW+V+
Sbjct: 252 AAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAKPPYWIVK 307

Query: 193 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           NSWG    ++G+ ++  G+N C ++  A  ATID
Sbjct: 308 NSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATID 341



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 38/61 (62%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L H VL+VG+ +Q   PYW+V+NSWG    ++G+ ++  G+N C ++  A  ATI
Sbjct: 281  CFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTATI 340

Query: 1025 D 1025
            D
Sbjct: 341  D 341


>gi|33242874|gb|AAQ01141.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 166/338 (49%), Gaps = 22/338 (6%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 327
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 381
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCG 439
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GCG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 440 GCDGLEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSET 497
           G   ++Q  +Y     GL++E+ YPY   + +   C +D S V     G   +       
Sbjct: 180 G-GLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGYKDVKSGNEHA 236

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD---IPY 554
           +K+ +   GP+SV +++    F   +    ++  CS   L H VL VGYG  +D     +
Sbjct: 237 LKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAF 296

Query: 555 WLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           W+ +NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 297 WIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 21/337 (6%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 693
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 747
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCD 805
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GC 
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 806 GCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETM 863
           G   + + +Y     GL++E+ YPY   + +   C +D S V     G   +       +
Sbjct: 180 GGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGYKDVKSGNEHAL 237

Query: 864 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---IPYW 920
           K+ +   GP+SV +++        +    ++  CS   L H VL VGYG  ++     +W
Sbjct: 238 KRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFW 297

Query: 921 LVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 298 IVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 121/228 (53%), Gaps = 10/228 (4%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           + +G +P + DWR  ++     DQ +CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+
Sbjct: 109 DDNGTLPKSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVD 168

Query: 66  CAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK 121
           C+K     GC G   + + +Y     GL++E+ YPY   + +   C +D S V     G 
Sbjct: 169 CSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGY 226

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
             +       +K+ +   GP+SV +++        +    ++  CS   L H VL VGYG
Sbjct: 227 KDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYG 286

Query: 182 KQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 287 AMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|171948778|gb|ACB59246.1| cathepsin H [Sus scrofa]
          Length = 297

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 108/304 (35%), Positives = 150/304 (49%), Gaps = 41/304 (13%)

Query: 307 EEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVA 358
           EE   R + F  +  K +         + G ++FSD S +EI  K  + WSE   +   A
Sbjct: 8   EEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHK--YLWSEP--QNCSA 63

Query: 359 DREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKT 417
            +         +   GP P + DWRKK N   P  +Q +CGSCW FS  G LE   AI T
Sbjct: 64  TKGNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIAT 117

Query: 418 GKLVEFSKSQLVECAKQCS--GC-GGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKF 472
           GK++  ++ QLV+CA+  +  GC GG  GL  Q  EY  +  G+  E  YPY+   G+  
Sbjct: 118 GKMLSLAEQQLVDCAQNFNNHGCQGGLPGLPSQAFEYIRYNKGIMGEDTYPYK---GQDD 174

Query: 473 KCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGL---NSHLIH---FYNGTP 524
            C +   K   F  KD   +  N  E M + +  Y P+S      N  L++    Y+ T 
Sbjct: 175 HCKFQPDKAIAFV-KDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTS 233

Query: 525 IRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQ 584
             K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F IERG N CG+  
Sbjct: 234 CHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAA 288

Query: 585 IAGY 588
            A Y
Sbjct: 289 CASY 292



 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 149/304 (49%), Gaps = 42/304 (13%)

Query: 673 EEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVA 724
           EE   R + F  +  K +         + G ++FSD S +EI  K  + WSE   +   A
Sbjct: 8   EEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHK--YLWSEP--QNCSA 63

Query: 725 DREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKT 783
            +         +   GP P + DWRKK N   P  +Q +CGSCW FS  G LE   AI T
Sbjct: 64  TKGNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIAT 117

Query: 784 GKLVEFSKSQLVECAKQCS--GCDGCFF---EPSIEYT-HQAGLESEKDYPYKNANGEKF 837
           GK++  ++ QLV+CA+  +  GC G        + EY  +  G+  E  YPYK   G+  
Sbjct: 118 GKMLSLAEQQLVDCAQNFNNHGCQGGLPGLPSQAFEYIRYNKGIMGEDTYPYK---GQDD 174

Query: 838 KCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSV---LLNSDLIHD---YNGTP 889
            C +   K   F  KD   +  N  E M + +  Y P+S    + N  L++    Y+ T 
Sbjct: 175 HCKFQPDKAIAFV-KDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTS 233

Query: 890 IRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 949
             K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+  
Sbjct: 234 CHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAA 288

Query: 950 IAGY 953
            A Y
Sbjct: 289 CASY 292



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/229 (38%), Positives = 120/229 (52%), Gaps = 24/229 (10%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 73  GPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCA 132

Query: 68  KQCS--GCDGCFF---EPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 121
           +  +  GC G        + EY  +  G+  E  YPYK   G+   C +   K   F  K
Sbjct: 133 QNFNNHGCQGGLPGLPSQAFEYIRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-K 188

Query: 122 DF--LHFNGSETMKKILYKYGPLSV---LLNSDLIHD---YNGTPIRKNDETCSPYDLGH 173
           D   +  N  E M + +  Y P+S    + N  L++    Y+ T   K     +P  + H
Sbjct: 189 DVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNH 243

Query: 174 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           AVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 244 AVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 292



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 237  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 292


>gi|195624522|gb|ACG34091.1| thiol protease aleurain precursor [Zea mays]
          Length = 360

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 144/313 (46%), Gaps = 26/313 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           F  F V+ G+ Y +  E+ +RF  F +               R G + F+D S EE    
Sbjct: 59  FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRA- 117

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           T    ++     +  +       +        +P+  DWR+  +  P  +Q  CGSCW F
Sbjct: 118 TRLGAAQNCSATLTGNHRMRAAAV-------ALPETKDWREDGIVSPVKNQGHCGSCWTF 170

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSIEYT-HQAGLESEKD 826
           S  G LE  Y   TGK +  S+ QL++C  A    GC+G     + EY  +  GL++E+ 
Sbjct: 171 STTGALEAAYTQATGKPISLSEQQLIDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEES 230

Query: 827 YPYKNANGEKFKCAYDKSKV--KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           YPY+  NG    C +    V  K+    + +     + +K  +    P+SV         
Sbjct: 231 YPYQGVNG---ICKFKNENVGFKVLDSVN-ITLGAEDELKDAVGLVRPVSVAFEVITGFR 286

Query: 885 YNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
              + +  +D    +P D+ HAVL VGYG +D +PYWL++NSWG    DEG+FK+E G N
Sbjct: 287 LYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKN 346

Query: 944 ACGIEQIAGYATI 956
            CG+   A Y  +
Sbjct: 347 MCGVATCASYPIV 359



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 140/313 (44%), Gaps = 25/313 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           F  F V+ G+ Y +  E+ +RF  F +               R G + F+D S EE    
Sbjct: 59  FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRA- 117

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           T    ++     +  +       +        +P+  DWR+  +  P  +Q  CGSCW F
Sbjct: 118 TRLGAAQNCSATLTGNHRMRAAAV-------ALPETKDWREDGIVSPVKNQGHCGSCWTF 170

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKD 461
           S  G LE  Y   TGK +  S+ QL++C    +  G   GL  Q  EY  +  GL++E+ 
Sbjct: 171 STTGALEAAYTQATGKPISLSEQQLIDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEES 230

Query: 462 YPYRNGNGEKFKCAYDKSKV--KLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL-IH 518
           YPY+  NG    C +    V  K+    + +     + +K  +    P+SV         
Sbjct: 231 YPYQGVNG---ICKFKNENVGFKVLDSVN-ITLGAEDELKDAVGLVRPVSVAFEVITGFR 286

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    DEG+FK+E G N
Sbjct: 287 LYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKN 346

Query: 579 ACGIEQIAGYATI 591
            CG+   A Y  +
Sbjct: 347 MCGVATCASYPIV 359



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 114/221 (51%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 68
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK +  S+ QL++C  A 
Sbjct: 143 LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLIDCGFAF 202

Query: 69  QCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLH 125
              GC+G     + EY  +  GL++E+ YPY+  NG    C +    V  K+    + + 
Sbjct: 203 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNG---ICKFKNENVGFKVLDSVN-IT 258

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQD 184
               + +K  +    P+SV            + +  +D    +P D+ HAVL VGYG +D
Sbjct: 259 LGAEDELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVED 318

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 319 GVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 41/59 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +P D+ HAVL VGYG +D +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 301  TPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359


>gi|16506815|gb|AAL23962.1|AF426248_1 truncated cathepsin H [Homo sapiens]
          Length = 323

 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 153/314 (48%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 23  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 79

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 80  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 131

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 132 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNYGCQGGLPSQAFEYILYNKGIMGED 191

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD  +      E M + +  Y P+S    +  D 
Sbjct: 192 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 247

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IE
Sbjct: 248 MMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIE 304

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 305 RGKNMCGLAACASY 318



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 150/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 23  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 79

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 80  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 131

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 132 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNYGCQGGLPSQAFEYILYNKGIMGED 191

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G    C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 192 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 247

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 248 MMYRTGIYSSTSCHK-----TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFL 302

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 303 IERGKNMCGLAACASY 318



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 102 GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 161

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 162 QDFNNYGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVA 217

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 218 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAV 274

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275 GYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 318



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 263  TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 318


>gi|356541074|ref|XP_003539008.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 363

 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 155/323 (47%), Gaps = 49/323 (15%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           F  F  + G+ YA+ EE   RFE FK +  +  +H+       +G + FSD +  E   K
Sbjct: 48  FLDFKRRFGKAYASQEEHNYRFEVFKANMRRARRHQSLDPSAAHGVTRFSDLTASEFRNK 107

Query: 710 T-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
             G +       R+ ++  K   +  +      +P  +DWR      P  +Q +CGSCW+
Sbjct: 108 VLGLRGV-----RLPSNANKAPILPTD-----NLPSDFDWRDHGAVTPVKNQGSCGSCWS 157

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA 819
           FS  G LEG + + TG+LV  S+ QLV+C  +C         SGC+G     + EY  ++
Sbjct: 158 FSTTGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYILKS 217

Query: 820 -GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
            G+  E+DYPY     ++  C +DK+K+        +     + +   L K GPL+V +N
Sbjct: 218 GGVMREEDYPYSGT--DRGNCKFDKAKIAASVANFSVISLDEDQIAANLVKNGPLAVAIN 275

Query: 879 SDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWG 927
           +  +  Y G           PY     L H VLLVGYG       +    P+W+++NSWG
Sbjct: 276 AAYMQTYIGG-------VSCPYICSRRLDHGVLLVGYGSGAYAPIRMKEKPFWIIKNSWG 328

Query: 928 PIGPDEGFFKIERGNNACGIEQI 950
               + G++KI RG N CG++ +
Sbjct: 329 ENWGENGYYKICRGRNICGVDSM 351



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 159/335 (47%), Gaps = 49/335 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           F  F  + G+ YA+ EE   RFE FK +  +  +H+       +G + FSD +  E   K
Sbjct: 48  FLDFKRRFGKAYASQEEHNYRFEVFKANMRRARRHQSLDPSAAHGVTRFSDLTASEFRNK 107

Query: 344 T-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
             G +       R+ ++  K   +  +      +P  +DWR      P  +Q +CGSCW+
Sbjct: 108 VLGLRGV-----RLPSNANKAPILPTD-----NLPSDFDWRDHGAVTPVKNQGSCGSCWS 157

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA 454
           FS  G LEG + + TG+LV  S+ QLV+C  +C      S   GC+G  +    EY  ++
Sbjct: 158 FSTTGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYILKS 217

Query: 455 -GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
            G+  E+DYPY     ++  C +DK+K+        +     + +   L K GPL+V +N
Sbjct: 218 GGVMREEDYPY--SGTDRGNCKFDKAKIAASVANFSVISLDEDQIAANLVKNGPLAVAIN 275

Query: 514 SHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWG 562
           +  +  Y G           PY     L H VLLVGYG       +  + P+W+ +NSWG
Sbjct: 276 AAYMQTYIGG-------VSCPYICSRRLDHGVLLVGYGSGAYAPIRMKEKPFWIIKNSWG 328

Query: 563 PIGPDEGFFKIERGNNACGIEQ-IAGYATIDVVIQ 596
               + G++KI RG N CG++  ++  A +    Q
Sbjct: 329 ENWGENGYYKICRGRNICGVDSMVSTVAAVHTTTQ 363



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 31/242 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR      P  +Q  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 131 LPSDFDWRDHGAVTPVKNQGSCGSCWSFSTTGALEGAHFLSTGELVSLSEQQLVDCDHEC 190

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  ++ G+  E+DYPY     ++  C +DK+K+     
Sbjct: 191 DPEEAGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPYSGT--DRGNCKFDKAKIAASVA 248

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 249 NFSVISLDEDQIAANLVKNGPLAVAINAAYMQTYIGG-------VSCPYICSRRLDHGVL 301

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVV 228
           LVGYG       +    P+W+++NSWG    + G++KI RG N CG++  ++  A +   
Sbjct: 302 LVGYGSGAYAPIRMKEKPFWIIKNSWGENWGENGYYKICRGRNICGVDSMVSTVAAVHTT 361

Query: 229 IQ 230
            Q
Sbjct: 362 TQ 363



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + P+W+++NSWG    + G++KI RG N CG++ +
Sbjct: 296  LDHGVLLVGYGSGAYAPIRMKEKPFWIIKNSWGENWGENGYYKICRGRNICGVDSM 351


>gi|449270628|gb|EMC81287.1| Cathepsin H, partial [Columba livia]
          Length = 261

 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 123/231 (53%), Gaps = 13/231 (5%)

Query: 736 VEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 794
           +   GP PD+ DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL+  ++ QL
Sbjct: 36  LRSSGPYPDSIDWRKKGNYVTPVKNQGPCGSCWTFSTTGCLESAIAIATGKLLSLAEQQL 95

Query: 795 VECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 851
           V+CA+  +  GC G     + EY  +  GL  E  YPY+  NG    C +   K   F  
Sbjct: 96  VDCAQAFNNHGCSGGLPSQAFEYILYNRGLMGEDTYPYRAENG---TCKFQPEKAIAFV- 151

Query: 852 KDFLHFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 907
           +D ++      + M + + K+ P+S    + S+ +H   G       E  +P  + HAVL
Sbjct: 152 RDVINITQYDEDGMVEAVGKHNPVSFAFEVTSNFMHYRKGVYSNPRCEH-TPDKVNHAVL 210

Query: 908 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
            VGYG++D  P+W+V+NSWGP+   +G+F IERG N CG+   A Y    V
Sbjct: 211 AVGYGEEDGTPFWIVKNSWGPLWGMDGYFLIERGKNMCGLAACASYPVPQV 261



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 123/231 (53%), Gaps = 13/231 (5%)

Query: 5   VEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           +   GP PD+ DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL+  ++ QL
Sbjct: 36  LRSSGPYPDSIDWRKKGNYVTPVKNQGPCGSCWTFSTTGCLESAIAIATGKLLSLAEQQL 95

Query: 64  VECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           V+CA+  +  GC G     + EY  +  GL  E  YPY+  NG    C +   K   F  
Sbjct: 96  VDCAQAFNNHGCSGGLPSQAFEYILYNRGLMGEDTYPYRAENG---TCKFQPEKAIAFV- 151

Query: 121 KDFLHFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 176
           +D ++      + M + + K+ P+S    + S+ +H   G       E  +P  + HAVL
Sbjct: 152 RDVINITQYDEDGMVEAVGKHNPVSFAFEVTSNFMHYRKGVYSNPRCEH-TPDKVNHAVL 210

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
            VGYG++D  P+W+V+NSWGP+   +G+F IERG N CG+   A Y    V
Sbjct: 211 AVGYGEEDGTPFWIVKNSWGPLWGMDGYFLIERGKNMCGLAACASYPVPQV 261



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 89/231 (38%), Positives = 122/231 (52%), Gaps = 12/231 (5%)

Query: 370 VEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 428
           +   GP PD+ DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL+  ++ QL
Sbjct: 36  LRSSGPYPDSIDWRKKGNYVTPVKNQGPCGSCWTFSTTGCLESAIAIATGKLLSLAEQQL 95

Query: 429 VECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTG 486
           V+CA+  +  G   GL  Q  EY  +  GL  E  YPYR  NG    C +   K   F  
Sbjct: 96  VDCAQAFNNHGCSGGLPSQAFEYILYNRGLMGEDTYPYRAENG---TCKFQPEKAIAFV- 151

Query: 487 KDFLYFN--GSETMKKILYKYGPLSVG--LNSHLIHFYNGTPIRKNDETCSPYDLGHAVL 542
           +D +       + M + + K+ P+S    + S+ +H+  G       E  +P  + HAVL
Sbjct: 152 RDVINITQYDEDGMVEAVGKHNPVSFAFEVTSNFMHYRKGVYSNPRCEH-TPDKVNHAVL 210

Query: 543 LVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 593
            VGYG++D  P+W+ +NSWGP+   +G+F IERG N CG+   A Y    V
Sbjct: 211 AVGYGEEDGTPFWIVKNSWGPLWGMDGYFLIERGKNMCGLAACASYPVPQV 261



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 41/61 (67%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            +P  + HAVL VGYG++D  P+W+V+NSWGP+   +G+F IERG N CG+   A Y    
Sbjct: 201  TPDKVNHAVLAVGYGEEDGTPFWIVKNSWGPLWGMDGYFLIERGKNMCGLAACASYPVPQ 260

Query: 1026 V 1026
            V
Sbjct: 261  V 261


>gi|1594287|gb|AAC48340.1| cathepsin L-like cysteine proteinase [Toxocara canis]
          Length = 360

 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 170/335 (50%), Gaps = 27/335 (8%)

Query: 634 VVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQD---GHKK 689
           VVA+  ++  E       E  +L+ F+ FI K  + Y ++EE  ERF  +  +     K 
Sbjct: 25  VVAKNQSVKFEKEYDLTRELRLLDRFEEFIRKYDKVYDSNEEFAERFRIYVNNMLEAQKL 84

Query: 690 HER-------YGTSEFSDRSPEE----ILCKTGFKWSERTYERIVADREKVEKMLMEVEK 738
           ++R       YG +EF+D +  E    +L K  FK   +    I +  +  E +L   E+
Sbjct: 85  NQRNRDYGTIYGENEFADWNVNEFREILLPKDFFKNLRKKSTFIDSFIDPPETVLARREE 144

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
              +PD +DWR  NV  P   Q  CGSCWAF+  G +E  YA+ TG+L   S+ QL++C 
Sbjct: 145 ---IPDHFDWRPYNVVTPVKSQFKCGSCWAFATVGTVESAYALGTGELRSLSEQQLLDCN 201

Query: 799 KQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
            + + CDG   + ++ Y +  GL  E DYPY     +  +   + +++K      FLH +
Sbjct: 202 LENNACDGGDVDKALRYVYDEGLMREYDYPYVAHRQDTCQLRGETTRIKAAV---FLHQD 258

Query: 859 GSETMKKILYKYGPLSVLLNSDL-IHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQD- 915
            +  +  +L+ YGP++V +N    +  Y G     +   C    +G H++ +VGYG  + 
Sbjct: 259 EASIIDWLLH-YGPVNVGINVTADMKAYKGGVYTPDKWECENKIIGTHSINIVGYGTWNA 317

Query: 916 -NIPYWLVRNSWG-PIGPDEGFFKIERGNNACGIE 948
            N  YW+V+NSWG   G ++G+    RG N+CGIE
Sbjct: 318 TNQKYWIVKNSWGQSYGIEDGYVYFARGINSCGIE 352



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 172/336 (51%), Gaps = 28/336 (8%)

Query: 268 VVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQD---GHKK 323
           VVA+  ++  E       E  +L+ F+ FI K  + Y ++EE  ERF  +  +     K 
Sbjct: 25  VVAKNQSVKFEKEYDLTRELRLLDRFEEFIRKYDKVYDSNEEFAERFRIYVNNMLEAQKL 84

Query: 324 HER-------YGTSEFSDRSPEE----ILCKTGFKWSERTYERIVADREKVEKMLMEVEK 372
           ++R       YG +EF+D +  E    +L K  FK   +    I +  +  E +L   E+
Sbjct: 85  NQRNRDYGTIYGENEFADWNVNEFREILLPKDFFKNLRKKSTFIDSFIDPPETVLARREE 144

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
              +PD +DWR  NV  P   Q  CGSCWAF+  G +E  YA+ TG+L   S+ QL++C 
Sbjct: 145 ---IPDHFDWRPYNVVTPVKSQFKCGSCWAFATVGTVESAYALGTGELRSLSEQQLLDCN 201

Query: 433 KQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            + + C G D +++ + Y +  GL  E DYPY     +  +   + +++K      FL+ 
Sbjct: 202 LENNACDGGD-VDKALRYVYDEGLMREYDYPYVAHRQDTCQLRGETTRIKAAV---FLHQ 257

Query: 493 NGSETMKKILYKYGPLSVGLN-SHLIHFYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQD 550
           + +  +  +L+ YGP++VG+N +  +  Y G     +   C    +G H++ +VGYG  +
Sbjct: 258 DEASIIDWLLH-YGPVNVGINVTADMKAYKGGVYTPDKWECENKIIGTHSINIVGYGTWN 316

Query: 551 --DIPYWLARNSWG-PIGPDEGFFKIERGNNACGIE 583
             +  YW+ +NSWG   G ++G+    RG N+CGIE
Sbjct: 317 ATNQKYWIVKNSWGQSYGIEDGYVYFARGINSCGIE 352



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 116/212 (54%), Gaps = 9/212 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR  NV  P   Q  CGSCWAF+  G +E  YA+ TG+L   S+ QL++C  + 
Sbjct: 145 IPDHFDWRPYNVVTPVKSQFKCGSCWAFATVGTVESAYALGTGELRSLSEQQLLDCNLEN 204

Query: 71  SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 130
           + CDG   + ++ Y +  GL  E DYPY     +  +   + +++K      FLH + + 
Sbjct: 205 NACDGGDVDKALRYVYDEGLMREYDYPYVAHRQDTCQLRGETTRIKAAV---FLHQDEAS 261

Query: 131 TMKKILYKYGPLSVLLNSDL-IHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQD--NI 186
            +  +L+ YGP++V +N    +  Y G     +   C    +G H++ +VGYG  +  N 
Sbjct: 262 IIDWLLH-YGPVNVGINVTADMKAYKGGVYTPDKWECENKIIGTHSINIVGYGTWNATNQ 320

Query: 187 PYWLVRNSWG-PIGPDEGFFKIERGNNACGIE 217
            YW+V+NSWG   G ++G+    RG N+CGIE
Sbjct: 321 KYWIVKNSWGQSYGIEDGYVYFARGINSCGIE 352



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 3/48 (6%)

Query: 972  HAVLLVGYGKQD--DIPYWLVRNSWG-PIGPDEGFFKIERGNNACGIE 1016
            H++ +VGYG  +  +  YW+V+NSWG   G ++G+    RG N+CGIE
Sbjct: 305  HSINIVGYGTWNATNQKYWIVKNSWGQSYGIEDGYVYFARGINSCGIE 352


>gi|33333712|gb|AAQ11974.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 33/314 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 334
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +  G  GC G  + Q  ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             G+++E+ YPY    G +  C   KS   +   K +++    + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 513 NSHLIHFYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +  + FY+   +   DE C       DL H VL+VGYG ++ + YW+ +NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 569 GFFKIERGNNACGI 582
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 158/314 (50%), Gaps = 34/314 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 700
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFEPSIEYTH 817
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +    +GC G     + ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             G+++E+ YPY+   G +  C   KS   +   K ++     + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 878 NSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +  +  Y+   +   DE C       DL H VL+VGYG ++ + YW+V+NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 934 GFFKIERGNNACGI 947
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 15/211 (7%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 69
           DA DWR++    P  DQA+CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +   
Sbjct: 114 DAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYG 173

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K ++     
Sbjct: 174 NNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDE 228

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDN 185
           + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VGYG ++ 
Sbjct: 229 QEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENG 285

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 286 VDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 35/47 (74%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            DL H VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 270  DLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|297793593|ref|XP_002864681.1| hypothetical protein ARALYDRAFT_496172 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310516|gb|EFH40940.1| hypothetical protein ARALYDRAFT_496172 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 361

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 151/308 (49%), Gaps = 36/308 (11%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           TF  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  TFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKLTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA   +  GC+G     + EY     GL++E+
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAYNNYGCNGGLPSQAFEYIKSNGGLDTEE 227

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
            YPY   +G    C +    V +       +     + +K  +    P+S+    ++IH 
Sbjct: 228 AYPYIGKDG---TCKFSAENVGVQVLDSVNITLGAEDELKHAVGLVRPVSIAF--EVIHS 282

Query: 885 YNGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +    + K+    D  C  +P D+ HAVL VGYG +D +PYWL++NSWG    D+G+FK+
Sbjct: 283 FR---LYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKM 339

Query: 939 ERGNNACG 946
           E G N CG
Sbjct: 340 EMGKNMCG 347



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 143/303 (47%), Gaps = 25/303 (8%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           TF  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  TFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKLTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY     GL++E+
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAYNNYGCNGGLPSQAFEYIKSNGGLDTEE 227

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-HLIH 518
            YPY   +G    C +    V +          G+E  +K  +    P+S+     H   
Sbjct: 228 AYPYIGKDG---TCKFSAENVGVQVLDSVNITLGAEDELKHAVGLVRPVSIAFEVIHSFR 284

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    D+G+FK+E G N
Sbjct: 285 LYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKN 344

Query: 579 ACG 581
            CG
Sbjct: 345 MCG 347



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 18/218 (8%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y    GK +  S+ QLV+CA
Sbjct: 138 EAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCA 197

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
              +  GC+G     + EY     GL++E+ YPY   +G    C +    V +       
Sbjct: 198 GAYNNYGCNGGLPSQAFEYIKSNGGLDTEEAYPYIGKDG---TCKFSAENVGVQVLDSVN 254

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLL 177
           +     + +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL 
Sbjct: 255 ITLGAEDELKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYTDSHCGSTPMDVNHAVLA 309

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 215
           VGYG +D +PYWL++NSWG    D+G+FK+E G N CG
Sbjct: 310 VGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCG 347


>gi|145334857|ref|NP_001078774.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|332009932|gb|AED97315.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 361

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 154/307 (50%), Gaps = 34/307 (11%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA   +  GC+G     + EY     GL++EK
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEK 227

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
            YPY   + E  K + +   V++    + +     + +K  +    P+S+    ++IH +
Sbjct: 228 AYPYTGKD-ETCKFSAENVGVQVLNSVN-ITLGAEDELKHAVGLVRPVSIAF--EVIHSF 283

Query: 886 NGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
               + K+    D  C  +P D+ HAVL VGYG +D +PYWL++NSWG    D+G+FK+E
Sbjct: 284 R---LYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKME 340

Query: 940 RGNNACG 946
            G N CG
Sbjct: 341 MGKNMCG 347



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 145/302 (48%), Gaps = 23/302 (7%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY     GL++EK
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEK 227

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS-HLIHF 519
            YPY  G  E  K + +   V++    + +     + +K  +    P+S+     H    
Sbjct: 228 AYPY-TGKDETCKFSAENVGVQVLNSVN-ITLGAEDELKHAVGLVRPVSIAFEVIHSFRL 285

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
           Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    D+G+FK+E G N 
Sbjct: 286 YKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNM 345

Query: 580 CG 581
           CG
Sbjct: 346 CG 347



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 116/217 (53%), Gaps = 16/217 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y    GK +  S+ QLV+CA
Sbjct: 138 EAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCA 197

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
              +  GC+G     + EY     GL++EK YPY   + E  K + +   V++    + +
Sbjct: 198 GAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVN-I 255

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLV 178
                + +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL V
Sbjct: 256 TLGAEDELKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYTDSHCGSTPMDVNHAVLAV 310

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 215
           GYG +D +PYWL++NSWG    D+G+FK+E G N CG
Sbjct: 311 GYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCG 347


>gi|405971603|gb|EKC36430.1| Cathepsin L [Crassostrea gigas]
          Length = 360

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 157/320 (49%), Gaps = 31/320 (9%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSP 337
           + +K F +   + Y   EE   RFE F+++  K  E              G ++FSD   
Sbjct: 54  QAWKEFKILHDKTYDALEEESRRFEIFRENVQKIEEHNKLYHLGKKSYYLGVNQFSDLKH 113

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE +   G K  + + +            L+E       PD+ DWRKK       +Q  C
Sbjct: 114 EEFVKYNGLK--KTSLKDGGCSSYLAANNLVE-------PDSVDWRKKGYVTDVKNQGQC 164

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQ-A 454
           GSCW+FS  G LEGQ+  K+GKLV  S+SQLV+C+ Q  G  GC+G  ++   +Y     
Sbjct: 165 GSCWSFSTTGSLEGQHFRKSGKLVSLSESQLVDCS-QSFGNEGCNGGLMDNAFKYIKSVG 223

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLN 513
           GLESE+DYPY+   G    C +D +KV           +GSE+ +KK + + GP+SV ++
Sbjct: 224 GLESEEDYPYKPKQG---TCKFDDTKVAATDTGCVDVESGSESALKKAVSEVGPVSVAID 280

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEGFFK 572
           +    F +      ++  CS   L H VL VGYG  D    YW+ +NSWG    ++G+ K
Sbjct: 281 ASHSSFQSYAGGVYDEPECSSEQLDHGVLCVGYGTDDQGQDYWIVKNSWGAEWGEDGYVK 340

Query: 573 IERG-NNACGIEQIAGYATI 591
           + R   N CGI   A Y  +
Sbjct: 341 MSRNKKNQCGIATQASYPLV 360



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/321 (33%), Positives = 157/321 (48%), Gaps = 34/321 (10%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSP 703
           + +K F +   + Y   EE   RFE F+++  K  E              G ++FSD   
Sbjct: 54  QAWKEFKILHDKTYDALEEESRRFEIFRENVQKIEEHNKLYHLGKKSYYLGVNQFSDLKH 113

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE +   G K  + + +            L+E       PD+ DWRKK       +Q  C
Sbjct: 114 EEFVKYNGLK--KTSLKDGGCSSYLAANNLVE-------PDSVDWRKKGYVTDVKNQGQC 164

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQ-AG 820
           GSCW+FS  G LEGQ+  K+GKLV  S+SQLV+C++     GC+G   + + +Y     G
Sbjct: 165 GSCWSFSTTGSLEGQHFRKSGKLVSLSESQLVDCSQSFGNEGCNGGLMDNAFKYIKSVGG 224

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNS 879
           LESE+DYPYK   G    C +D +KV           +GSE+ +KK + + GP+SV +++
Sbjct: 225 LESEEDYPYKPKQG---TCKFDDTKVAATDTGCVDVESGSESALKKAVSEVGPVSVAIDA 281

Query: 880 --DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFF 936
                  Y G     ++  CS   L H VL VGYG  D    YW+V+NSWG    ++G+ 
Sbjct: 282 SHSSFQSYAGGVY--DEPECSSEQLDHGVLCVGYGTDDQGQDYWIVKNSWGAEWGEDGYV 339

Query: 937 KIERG-NNACGIEQIAGYATI 956
           K+ R   N CGI   A Y  +
Sbjct: 340 KMSRNKKNQCGIATQASYPLV 360



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/222 (39%), Positives = 122/222 (54%), Gaps = 13/222 (5%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC- 70
           PD+ DWRKK       +Q  CGSCW+FS  G LEGQ+  K+GKLV  S+SQLV+C++   
Sbjct: 144 PDSVDWRKKGYVTDVKNQGQCGSCWSFSTTGSLEGQHFRKSGKLVSLSESQLVDCSQSFG 203

Query: 71  -SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
             GC+G   + + +Y     GLESE+DYPYK   G    C +D +KV           +G
Sbjct: 204 NEGCNGGLMDNAFKYIKSVGGLESEEDYPYKPKQG---TCKFDDTKVAATDTGCVDVESG 260

Query: 129 SET-MKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           SE+ +KK + + GP+SV +++       Y G     ++  CS   L H VL VGYG  D 
Sbjct: 261 SESALKKAVSEVGPVSVAIDASHSSFQSYAGGVY--DEPECSSEQLDHGVLCVGYGTDDQ 318

Query: 186 -IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
              YW+V+NSWG    ++G+ K+ R   N CGI   A Y  +
Sbjct: 319 GQDYWIVKNSWGAEWGEDGYVKMSRNKKNQCGIATQASYPLV 360



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIE 1016
            V ++  CS   L H VL VGYG  D    YW+V+NSWG    ++G+ K+ R   N CGI 
Sbjct: 293  VYDEPECSSEQLDHGVLCVGYGTDDQGQDYWIVKNSWGAEWGEDGYVKMSRNKKNQCGIA 352

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 353  TQASYPLV 360


>gi|339244637|ref|XP_003378244.1| cathepsin F [Trichinella spiralis]
 gi|316972865|gb|EFV56511.1| cathepsin F [Trichinella spiralis]
          Length = 317

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 139/278 (50%), Gaps = 34/278 (12%)

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM---LMEVEKDGPVPDAWDWR 383
           YG + F+D + +E           +TY  ++     + K    L++V++    P+ +DWR
Sbjct: 13  YGPTIFADMTQDEF---------RKTYLNMLETSALLPKQRIALLKVDR----PNKFDWR 59

Query: 384 KKNVTGPAGDQA----------ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
             NV      Q            CGS WAFS    +E  +AIK G L+  S+ Q+++C K
Sbjct: 60  NYNVVTKVKRQVWHKMQKKFLGKCGSSWAFSTIANIESAWAIKFGDLISLSEQQIIDCDK 119

Query: 434 QCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN 493
              GC G   L+   E    +G+++E DYPY   +G    C  +K K+K++     L   
Sbjct: 120 INRGCRGGQPLKAYHEIIRMSGVQAESDYPYTGLHGS---CKLNKEKIKVYINDTVLLHK 176

Query: 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI- 552
              T+   LY++GP++V +N+ ++  Y    I+    +C+P  L H   ++GYGK+  + 
Sbjct: 177 NETTIANYLYEHGPVAVRMNADILMLYRKGIIKPTKSSCNPNFLNHGATIIGYGKESWLH 236

Query: 553 ----PYWLARNSWGPIGPDEGFFKIERGNNACGIEQIA 586
               PYW+ +NSWG    + G+F++ RGN ACG+ ++ 
Sbjct: 237 WWSNPYWIIKNSWGVDWGENGYFRLYRGNEACGVNRMV 274



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 140/278 (50%), Gaps = 35/278 (12%)

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM---LMEVEKDGPVPDAWDWR 749
           YG + F+D + +E           +TY  ++     + K    L++V++    P+ +DWR
Sbjct: 13  YGPTIFADMTQDEF---------RKTYLNMLETSALLPKQRIALLKVDR----PNKFDWR 59

Query: 750 KKNVTGPAGDQA----------ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
             NV      Q            CGS WAFS    +E  +AIK G L+  S+ Q+++C K
Sbjct: 60  NYNVVTKVKRQVWHKMQKKFLGKCGSSWAFSTIANIESAWAIKFGDLISLSEQQIIDCDK 119

Query: 800 QCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
              GC G    +   E    +G+++E DYPY   +G    C  +K K+K++     L   
Sbjct: 120 INRGCRGGQPLKAYHEIIRMSGVQAESDYPYTGLHGS---CKLNKEKIKVYINDTVLLHK 176

Query: 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI- 917
              T+   LY++GP++V +N+D++  Y    I+    +C+P  L H   ++GYGK+  + 
Sbjct: 177 NETTIANYLYEHGPVAVRMNADILMLYRKGIIKPTKSSCNPNFLNHGATIIGYGKESWLH 236

Query: 918 ----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 951
               PYW+++NSWG    + G+F++ RGN ACG+ ++ 
Sbjct: 237 WWSNPYWIIKNSWGVDWGENGYFRLYRGNEACGVNRMV 274



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 124/235 (52%), Gaps = 23/235 (9%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQA----------DCGSCWAFSIAGMLEGQYAIK 51
           L++V++    P+ +DWR  NV      Q            CGS WAFS    +E  +AIK
Sbjct: 47  LLKVDR----PNKFDWRNYNVVTKVKRQVWHKMQKKFLGKCGSSWAFSTIANIESAWAIK 102

Query: 52  TGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAY 110
            G L+  S+ Q+++C K   GC G    +   E    +G+++E DYPY   +G    C  
Sbjct: 103 FGDLISLSEQQIIDCDKINRGCRGGQPLKAYHEIIRMSGVQAESDYPYTGLHGS---CKL 159

Query: 111 DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD 170
           +K K+K++     L      T+   LY++GP++V +N+D++  Y    I+    +C+P  
Sbjct: 160 NKEKIKVYINDTVLLHKNETTIANYLYEHGPVAVRMNADILMLYRKGIIKPTKSSCNPNF 219

Query: 171 LGHAVLLVGYGKQDNI-----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           L H   ++GYGK+  +     PYW+++NSWG    + G+F++ RGN ACG+ ++ 
Sbjct: 220 LNHGATIIGYGKESWLHWWSNPYWIIKNSWGVDWGENGYFRLYRGNEACGVNRMV 274


>gi|33333706|gb|AAQ11971.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 33/314 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 334
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +  G  GC G  + Q  ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             G+++E+ YPY    G +  C   KS   +   K +++    + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 513 NSHLIHFYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +  + FY+   +   DE C       DL H VL+VGYG ++ + YW+ +NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 569 GFFKIERGNNACGI 582
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 158/314 (50%), Gaps = 34/314 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 700
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFEPSIEYTH 817
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +    +GC G     + ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             G+++E+ YPY+   G +  C   KS   +   K ++     + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 878 NSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +  +  Y+   +   DE C       DL H VL+VGYG ++ + YW+V+NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 934 GFFKIERGNNACGI 947
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 15/211 (7%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 69
           DA DWR++    P  DQA+CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +   
Sbjct: 114 DAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYG 173

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K ++     
Sbjct: 174 NNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDE 228

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDN 185
           + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VGYG ++ 
Sbjct: 229 QEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENG 285

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 286 VDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 35/47 (74%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            DL H VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 270  DLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|438000427|ref|YP_007250532.1| v-cath protein [Thysanoplusia orichalcea NPV]
 gi|429842964|gb|AGA16276.1| v-cath protein [Thysanoplusia orichalcea NPV]
          Length = 323

 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 162/311 (52%), Gaps = 28/311 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 709
           F+ F+ +  + Y+++ E   RF+ F+ +             +Y  ++FSD S +E + K 
Sbjct: 28  FEEFVHRFNKNYSSETEKLRRFKIFQHNLNEIINKNQNDSAKYEINKFSDLSKDETIAKY 87

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWAF
Sbjct: 88  TGLSLPTQT--------QNFCKVIILDQPPGKGPLDFDWRRLNKVTNVKNQGTCGACWAF 139

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYP 828
           +    LE QYAIK  +L+  S+ Q+++C    +GC+G     + E      G++ E DYP
Sbjct: 140 ATLASLESQYAIKHNQLINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYP 199

Query: 829 YKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETMKKILYKYGPLSVLLNSDLIHDYN 886
           Y+ AN    +   +K  V++   KD   +     E +K +L   GP+ + +++  I +Y 
Sbjct: 200 YE-ANNNNCRMNGNKFAVRV---KDCYRYVTVYEEKLKDLLRVAGPIPMAIDAADIVNYK 255

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
              IR     C    L HAVLLVGYG ++NIP+W+ +N+WG    ++G+F++++  NACG
Sbjct: 256 QGVIR----YCFNSGLNHAVLLVGYGVENNIPFWIFKNTWGTDWGEDGYFRVQQNINACG 311

Query: 947 IE-QIAGYATI 956
           +  ++A  ATI
Sbjct: 312 MRNELASIATI 322



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 155/311 (49%), Gaps = 27/311 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 343
           F+ F+ +  + Y+++ E   RF+ F+ +             +Y  ++FSD S +E + K 
Sbjct: 28  FEEFVHRFNKNYSSETEKLRRFKIFQHNLNEIINKNQNDSAKYEINKFSDLSKDETIAKY 87

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWAF
Sbjct: 88  TGLSLPTQT--------QNFCKVIILDQPPGKGPLDFDWRRLNKVTNVKNQGTCGACWAF 139

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIE-YTHQAGLESEKDY 462
           +    LE QYAIK  +L+  S+ Q+++C    +GC G   L    E      G++ E DY
Sbjct: 140 ATLASLESQYAIKHNQLINLSEQQMIDCDFVDAGCNG-GLLHTAFEAIIKMGGVQLESDY 198

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG-SETMKKILYKYGPLSVGLNSHLIHFYN 521
           PY         C  + +K  +     + Y     E +K +L   GP+ + +++  I  Y 
Sbjct: 199 PYE---ANNNNCRMNGNKFAVRVKDCYRYVTVYEEKLKDLLRVAGPIPMAIDAADIVNYK 255

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
              IR     C    L HAVLLVGYG +++IP+W+ +N+WG    ++G+F++++  NACG
Sbjct: 256 QGVIR----YCFNSGLNHAVLLVGYGVENNIPFWIFKNTWGTDWGEDGYFRVQQNINACG 311

Query: 582 IE-QIAGYATI 591
           +  ++A  ATI
Sbjct: 312 MRNELASIATI 322



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 123/221 (55%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+    LE QYAIK  +L+  S+ Q+++C  
Sbjct: 110 GKGPLDFDWRRLNKVTNVKNQGTCGACWAFATLASLESQYAIKHNQLINLSEQQMIDCDF 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GC+G     + E      G++ E DYPY+ AN    +   +K  V++   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ANNNNCRMNGNKFAVRV---KDCYRYV 225

Query: 128 G--SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    IR     C    L HAVLLVGYG ++N
Sbjct: 226 TVYEEKLKDLLRVAGPIPMAIDAADIVNYKQGVIR----YCFNSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IP+W+ +N+WG    ++G+F++++  NACG+  ++A  ATI
Sbjct: 282 IPFWIFKNTWGTDWGEDGYFRVQQNINACGMRNELASIATI 322



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 44/61 (72%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IP+W+ +N+WG    ++G+F++++  NACG+  ++A  AT
Sbjct: 262  CFNSGLNHAVLLVGYGVENNIPFWIFKNTWGTDWGEDGYFRVQQNINACGMRNELASIAT 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|1149525|emb|CAA64218.1| preprocathepsin K [Mus musculus]
          Length = 329

 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 136/265 (51%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG         RI   R      L   E +G VPD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGL--------RIPPSRSYSNDTLYTPEWEGRVPDSIDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS AG LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTENYGCGGGYMTTAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  Q  G++SE  +PY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQQNGGIDSEDAFPYV---GQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE C   ++ HAVL+VGYG Q    +W+++NSWG    +
Sbjct: 245 ISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYALLARNKNNACGITNMASFPKM 329



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 136/266 (51%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG         RI   R      L   E +G VPD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGL--------RIPPSRSYSNDTLYTPEWEGRVPDSIDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS AG LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTENYGCGG-GYMTTAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  Q  G++SE  +PY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQQNGGIDSEDAFPYV---GQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE C   ++ HAVL+VGYG Q    +W+ +NSWG    
Sbjct: 244 PISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYALLARNKNNACGITNMASFPKM 329



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 123/227 (54%), Gaps = 6/227 (2%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           L   E +G VPD+ D+RKK    P  +Q  CGSCWAFS AG LEGQ   KTGKL+  S  
Sbjct: 106 LYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQ 165

Query: 62  QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFT 119
            LV+C  +  GC G +   + +Y  Q  G++SE  +PY    G+   C Y+ + K     
Sbjct: 166 NLVDCVTENYGCGGGYMTTAFQYVQQNGGIDSEDAFPYV---GQDESCMYNATAKAAKCR 222

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
           G   +     + +K+ + + GP+SV +++ L      +     DE C   ++ HAVL+VG
Sbjct: 223 GYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVG 282

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           YG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 283 YGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMASFPKM 329



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C   ++ HAVL+VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|359492709|ref|XP_002280798.2| PREDICTED: cysteine proteinase RD19a-like [Vitis vinifera]
 gi|147841854|emb|CAN73591.1| hypothetical protein VITISV_022889 [Vitis vinifera]
 gi|302142582|emb|CBI19785.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 164/352 (46%), Gaps = 57/352 (16%)

Query: 628 DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH 687
           D +  QVV+  D L           N    F  F  K G+ YA  EE   RF  FK +  
Sbjct: 36  DLLIHQVVSDGDDLL----------NAEYQFAEFKTKFGKTYATAEEHDHRFNVFKANLR 85

Query: 688 --KKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD 739
             K+H+       +G ++FSD +P E      F+ +    +R+    +  +  ++  +  
Sbjct: 86  RAKRHQLLDPSAEHGVTQFSDLTPRE------FRQNYLGLKRLQLPADAQKAPILPTKD- 138

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
             +P  +DWR         DQ  CGSCW+FS  G LEG + + TG LV  S  QL++C  
Sbjct: 139 --LPTDFDWRDHGAVTAVKDQGYCGSCWSFSTIGALEGAHFLATGNLVSLSTQQLLDCDT 196

Query: 800 QC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLF 849
           +C          GC+G     + EY  +A G+  E+DYPY     ++  C ++K+K+   
Sbjct: 197 ECDPEEYDACDDGCNGGLMNNAFEYILKAGGVAQEEDYPYTGT--DRGLCRFNKTKIAAS 254

Query: 850 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHA 905
                +     + +   L K GPL+V +N+  +  Y      K+  +C PY     L H 
Sbjct: 255 VANFSVVSLDEDQIAANLVKNGPLAVGINAVFMQTY------KSGVSC-PYICSSTLDHG 307

Query: 906 VLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           VLLVGYG            PYW+++NSWG    ++G++KI RG+N CG++ +
Sbjct: 308 VLLVGYGSAGYSPIRFKEKPYWIIKNSWGESWGEQGYYKICRGHNICGVDSM 359



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 166/352 (47%), Gaps = 56/352 (15%)

Query: 262 DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH 321
           D +  QVV+  D L           N    F  F  K G+ YA  EE   RF  FK +  
Sbjct: 36  DLLIHQVVSDGDDLL----------NAEYQFAEFKTKFGKTYATAEEHDHRFNVFKANLR 85

Query: 322 --KKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD 373
             K+H+       +G ++FSD +P E      F+ +    +R+    +  +  ++  +  
Sbjct: 86  RAKRHQLLDPSAEHGVTQFSDLTPRE------FRQNYLGLKRLQLPADAQKAPILPTKD- 138

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
             +P  +DWR         DQ  CGSCW+FS  G LEG + + TG LV  S  QL++C  
Sbjct: 139 --LPTDFDWRDHGAVTAVKDQGYCGSCWSFSTIGALEGAHFLATGNLVSLSTQQLLDCDT 196

Query: 434 QC-----SGC-GGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLF 484
           +C       C  GC+G  +    EY  +A G+  E+DYPY     ++  C ++K+K+   
Sbjct: 197 ECDPEEYDACDDGCNGGLMNNAFEYILKAGGVAQEEDYPYT--GTDRGLCRFNKTKIAAS 254

Query: 485 TGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHA 540
                +     + +   L K GPL+VG+N+  +  Y      K+  +C PY     L H 
Sbjct: 255 VANFSVVSLDEDQIAANLVKNGPLAVGINAVFMQTY------KSGVSC-PYICSSTLDHG 307

Query: 541 VLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           VLLVGYG          + PYW+ +NSWG    ++G++KI RG+N CG++ +
Sbjct: 308 VLLVGYGSAGYSPIRFKEKPYWIIKNSWGESWGEQGYYKICRGHNICGVDSM 359



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 116/230 (50%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         DQ  CGSCW+FS  G LEG + + TG LV  S  QL++C  +C
Sbjct: 139 LPTDFDWRDHGAVTAVKDQGYCGSCWSFSTIGALEGAHFLATGNLVSLSTQQLLDCDTEC 198

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                     GC+G     + EY  +A G+  E+DYPY     ++  C ++K+K+     
Sbjct: 199 DPEEYDACDDGCNGGLMNNAFEYILKAGGVAQEEDYPYTGT--DRGLCRFNKTKIAASVA 256

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y      K+  +C PY     L H VL
Sbjct: 257 NFSVVSLDEDQIAANLVKNGPLAVGINAVFMQTY------KSGVSC-PYICSSTLDHGVL 309

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG            PYW+++NSWG    ++G++KI RG+N CG++ +
Sbjct: 310 LVGYGSAGYSPIRFKEKPYWIIKNSWGESWGEQGYYKICRGHNICGVDSM 359



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLV 990
            ++ G  A GI  +        V     CS   L H VLLVGYG          + PYW++
Sbjct: 273  VKNGPLAVGINAVFMQTYKSGVSCPYICSS-TLDHGVLLVGYGSAGYSPIRFKEKPYWII 331

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    ++G++KI RG+N CG++ +
Sbjct: 332  KNSWGESWGEQGYYKICRGHNICGVDSM 359


>gi|10441624|gb|AAG17127.1|AF190653_1 cathepsin L-like cysteine proteinase CAL1 [Diabrotica virgifera
           virgifera]
          Length = 322

 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 163/340 (47%), Gaps = 37/340 (10%)

Query: 269 VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHK 322
           +A    +   G+L+ +     + +++F V+ G+ Y N  E + RF  F+       + + 
Sbjct: 3   IAFAAVILSAGALSLN-----QHWESFKVQHGKVYKNPIEERVRFSVFQANLKTINEHNA 57

Query: 323 KHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV 376
           K+E+         ++F+D +PEE   K G +           +  K++K       +  V
Sbjct: 58  KYEQGLVGYTMAVNQFADMTPEEFKAKLGMQ---------AKNMPKIKKSRHVKNVNAEV 108

Query: 377 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 436
           PD+ DWR+K       DQ  CGSCWAFS  G LEGQ  I  GK    S+ +L++C+ +  
Sbjct: 109 PDSVDWRQKGAVLGVKDQGQCGSCWAFSATGSLEGQNYIVNGKSEPLSEQELLDCSVE-Y 167

Query: 437 GCGGCDG---LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN 493
           G G CD    +    E+  + G+ SE  YPY    G+   C     K  L        + 
Sbjct: 168 GNGDCDEGGLMTLAFEFVEENGIVSEASYPYEAIQGD---CRTTNDKAVLHIQGYNEVYP 224

Query: 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYD--LGHAVLLVGYGKQDD 551
             E +++ +   GP+S  + +  I F++      +D  C  Y   L H +L+VGYG+++ 
Sbjct: 225 SEEALRQAVGTVGPISAAIWAEPIQFFSSGIY--DDPNCLNYVEYLDHGILVVGYGEENG 282

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
            PYW+ +NSWG    +EG+F+++R    CG+ Q+A Y  +
Sbjct: 283 TPYWIVKNSWGATWGEEGYFRLKRNIALCGLAQMASYPVL 322



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 164/339 (48%), Gaps = 36/339 (10%)

Query: 635 VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHK 688
           +A    +   G+L+ +     + +++F V+ G+ Y N  E + RF  F+       + + 
Sbjct: 3   IAFAAVILSAGALSLN-----QHWESFKVQHGKVYKNPIEERVRFSVFQANLKTINEHNA 57

Query: 689 KHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV 742
           K+E+         ++F+D +PEE   K G +           +  K++K       +  V
Sbjct: 58  KYEQGLVGYTMAVNQFADMTPEEFKAKLGMQ---------AKNMPKIKKSRHVKNVNAEV 108

Query: 743 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 802
           PD+ DWR+K       DQ  CGSCWAFS  G LEGQ  I  GK    S+ +L++C+ +  
Sbjct: 109 PDSVDWRQKGAVLGVKDQGQCGSCWAFSATGSLEGQNYIVNGKSEPLSEQELLDCSVEYG 168

Query: 803 G--CD-GCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 859
              CD G     + E+  + G+ SE  YPY+   G+   C     K  L        +  
Sbjct: 169 NGDCDEGGLMTLAFEFVEENGIVSEASYPYEAIQGD---CRTTNDKAVLHIQGYNEVYPS 225

Query: 860 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD--LGHAVLLVGYGKQDNI 917
            E +++ +   GP+S  + ++ I  ++      +D  C  Y   L H +L+VGYG+++  
Sbjct: 226 EEALRQAVGTVGPISAAIWAEPIQFFSSGIY--DDPNCLNYVEYLDHGILVVGYGEENGT 283

Query: 918 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           PYW+V+NSWG    +EG+F+++R    CG+ Q+A Y  +
Sbjct: 284 PYWIVKNSWGATWGEEGYFRLKRNIALCGLAQMASYPVL 322



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 10/223 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  VPD+ DWR+K       DQ  CGSCWAFS  G LEGQ  I  GK    S+ +L++C+
Sbjct: 105 NAEVPDSVDWRQKGAVLGVKDQGQCGSCWAFSATGSLEGQNYIVNGKSEPLSEQELLDCS 164

Query: 68  KQCSG--CD-GCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
            +     CD G     + E+  + G+ SE  YPY+   G+   C     K  L       
Sbjct: 165 VEYGNGDCDEGGLMTLAFEFVEENGIVSEASYPYEAIQGD---CRTTNDKAVLHIQGYNE 221

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD--LGHAVLLVGYGK 182
            +   E +++ +   GP+S  + ++ I  ++      +D  C  Y   L H +L+VGYG+
Sbjct: 222 VYPSEEALRQAVGTVGPISAAIWAEPIQFFSSGIY--DDPNCLNYVEYLDHGILVVGYGE 279

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           ++  PYW+V+NSWG    +EG+F+++R    CG+ Q+A Y  +
Sbjct: 280 ENGTPYWIVKNSWGATWGEEGYFRLKRNIALCGLAQMASYPVL 322



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 959  VKNDETCSPYD--LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            + +D  C  Y   L H +L+VGYG+++  PYW+V+NSWG    +EG+F+++R    CG+ 
Sbjct: 255  IYDDPNCLNYVEYLDHGILVVGYGEENGTPYWIVKNSWGATWGEEGYFRLKRNIALCGLA 314

Query: 1017 QIAGYATI 1024
            Q+A Y  +
Sbjct: 315  QMASYPVL 322


>gi|146215994|gb|ABQ10199.1| cysteine protease Cp1 [Actinidia deliciosa]
          Length = 358

 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 147/318 (46%), Gaps = 36/318 (11%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y   EE K RF  F ++       +KK   Y  G + F+D + EE   
Sbjct: 58  SFARFAHRYGKRYETAEETKLRFAIFSENLKLIRSHNKKGLSYTLGVNHFADWTWEE--- 114

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
              F+       +  +   K    L E      +P+  DWR   +  P  DQ  CGSCW 
Sbjct: 115 ---FRRHRLGAAQNCSATTKGNHKLTEE----ALPEMKDWRVSGIVSPVKDQGHCGSCWT 167

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA   +  GC G     + EY  +  GL++E+
Sbjct: 168 FSTTGALEAAYKQAFGKGISLSEQQLVDCAGAFNNFGCSGGLPSQAFEYVKYNGGLDTEE 227

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
            YPY   NGE   C +    V +       +     + +K  +    P+SV         
Sbjct: 228 AYPYTGKNGE---CKFSSENVGVQVLDSVNITLGAEDELKHAVAFVRPVSVAFQV----- 279

Query: 885 YNGTPIRK----NDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            NG  + K      +TC  +P D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+
Sbjct: 280 VNGFRLYKEGVYTSDTCGRTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDSGYFKM 339

Query: 939 ERGNNACGIEQIAGYATI 956
           E G N CG+   A Y  I
Sbjct: 340 EMGKNMCGVATCASYPVI 357



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 147/318 (46%), Gaps = 35/318 (11%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y   EE K RF  F ++       +KK   Y  G + F+D + EE   
Sbjct: 58  SFARFAHRYGKRYETAEETKLRFAIFSENLKLIRSHNKKGLSYTLGVNHFADWTWEE--- 114

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
              F+       +  +   K    L E      +P+  DWR   +  P  DQ  CGSCW 
Sbjct: 115 ---FRRHRLGAAQNCSATTKGNHKLTEE----ALPEMKDWRVSGIVSPVKDQGHCGSCWT 167

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GL++E+
Sbjct: 168 FSTTGALEAAYKQAFGKGISLSEQQLVDCAGAFNNFGCSGGLPSQAFEYVKYNGGLDTEE 227

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIHF 519
            YPY   NGE   C +    V +          G+E  +K  +    P+SV         
Sbjct: 228 AYPYTGKNGE---CKFSSENVGVQVLDSVNITLGAEDELKHAVAFVRPVSVAF-----QV 279

Query: 520 YNGTPIRK----NDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
            NG  + K      +TC  +P D+ HAVL VGYG ++ +PYWL +NSWG    D G+FK+
Sbjct: 280 VNGFRLYKEGVYTSDTCGRTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDSGYFKM 339

Query: 574 ERGNNACGIEQIAGYATI 591
           E G N CG+   A Y  I
Sbjct: 340 EMGKNMCGVATCASYPVI 357



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 18/225 (8%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR   +  P  DQ  CGSCW FS  G LE  Y    GK +  S+ QLV+CA   
Sbjct: 141 LPEMKDWRVSGIVSPVKDQGHCGSCWTFSTTGALEAAYKQAFGKGISLSEQQLVDCAGAF 200

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
           +  GC G     + EY  +  GL++E+ YPY   NGE   C +    V +       +  
Sbjct: 201 NNFGCSGGLPSQAFEYVKYNGGLDTEEAYPYTGKNGE---CKFSSENVGVQVLDSVNITL 257

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETC--SPYDLGHAVLLVGY 180
              + +K  +    P+SV          NG  + K      +TC  +P D+ HAVL VGY
Sbjct: 258 GAEDELKHAVAFVRPVSVAFQV-----VNGFRLYKEGVYTSDTCGRTPMDVNHAVLAVGY 312

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           G ++ +PYWL++NSWG    D G+FK+E G N CG+   A Y  I
Sbjct: 313 GVENGVPYWLIKNSWGADWGDSGYFKMEMGKNMCGVATCASYPVI 357


>gi|91085677|ref|XP_971867.1| PREDICTED: similar to cathepsin L-like protein; cysteine proteinase
           [Tribolium castaneum]
 gi|270011032|gb|EFA07480.1| cathepsin L precursor [Tribolium castaneum]
          Length = 329

 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 160/322 (49%), Gaps = 24/322 (7%)

Query: 648 TFDNENILETFKAFIVKRGRQYANDEE---IKERFEYFKQDGHKKHERY---------GT 695
           T D  ++ E ++ F  K GR +   +E    K  F+   Q+    +ERY         G 
Sbjct: 13  TSDASSLNEKWENFKQKHGRNFLFSKEEFFRKSLFQKKLQEIEDHNERYRKGLETYEMGI 72

Query: 696 SEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           ++FSD + +E+   T G +      E I+   +      + + + G +P ++DWR + V 
Sbjct: 73  NKFSDYTDDELFSYTHGLQLPSELPEPII---KISPNATLSLSRAG-LPSSFDWRSRGVI 128

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LE  Y I+ G +V  S+ QLV+C +Q  GC G +   +  
Sbjct: 129 TPVKNQRNCGSCWAFSTNGALEAHYKIRRGSVVTLSEQQLVDCVRQAFGCRGGWMTDAYM 188

Query: 815 Y-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGP 872
           Y     G+  +++YPYK + G    C +  SK K+   G  +L     E +K ++   GP
Sbjct: 189 YIARNGGINLDRNYPYKASAGP---CRFQASKPKVTIRGYAYLTGPNEEMLKHMVVTQGP 245

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++       G  +  N  +C+     HAV++VGYG+++   YWLV+NSWG     
Sbjct: 246 VSVAIDASGRFASYGGGVYYN-PSCARNKFTHAVVIVGYGRENGQDYWLVKNSWGRDWGL 304

Query: 933 EGFFKIERG-NNACGIEQIAGY 953
            G+ K+ R  NN CGI   A Y
Sbjct: 305 GGYIKMARNRNNHCGIASKASY 326



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 159/323 (49%), Gaps = 25/323 (7%)

Query: 282 TFDNENILETFKAFIVKRGRQYANDEE---IKERFEYFKQDGHKKHERY---------GT 329
           T D  ++ E ++ F  K GR +   +E    K  F+   Q+    +ERY         G 
Sbjct: 13  TSDASSLNEKWENFKQKHGRNFLFSKEEFFRKSLFQKKLQEIEDHNERYRKGLETYEMGI 72

Query: 330 SEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           ++FSD + +E+   T G +      E I+   +      + + + G +P ++DWR + V 
Sbjct: 73  NKFSDYTDDELFSYTHGLQLPSELPEPII---KISPNATLSLSRAG-LPSSFDWRSRGVI 128

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LE  Y I+ G +V  S+ QLV+C +Q  GC G    +  +
Sbjct: 129 TPVKNQRNCGSCWAFSTNGALEAHYKIRRGSVVTLSEQQLVDCVRQAFGCRGGWMTDAYM 188

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG--SETMKKILYKYG 506
                 G+  +++YPY+   G    C +  SK K+ T + + Y  G   E +K ++   G
Sbjct: 189 YIARNGGINLDRNYPYKASAGP---CRFQASKPKV-TIRGYAYLTGPNEEMLKHMVVTQG 244

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++       G  +  N  +C+     HAV++VGYG+++   YWL +NSWG    
Sbjct: 245 PVSVAIDASGRFASYGGGVYYN-PSCARNKFTHAVVIVGYGRENGQDYWLVKNSWGRDWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGY 588
             G+ K+ R  NN CGI   A Y
Sbjct: 304 LGGYIKMARNRNNHCGIASKASY 326



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 117/215 (54%), Gaps = 7/215 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P ++DWR + V  P  +Q +CGSCWAFS  G LE  Y I+ G +V  S+ QLV+C +Q 
Sbjct: 116 LPSSFDWRSRGVITPVKNQRNCGSCWAFSTNGALEAHYKIRRGSVVTLSEQQLVDCVRQA 175

Query: 71  SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG 128
            GC G +   +  Y     G+  +++YPYK + G    C +  SK K+   G  +L    
Sbjct: 176 FGCRGGWMTDAYMYIARNGGINLDRNYPYKASAGP---CRFQASKPKVTIRGYAYLTGPN 232

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            E +K ++   GP+SV +++       G  +  N  +C+     HAV++VGYG+++   Y
Sbjct: 233 EEMLKHMVVTQGPVSVAIDASGRFASYGGGVYYN-PSCARNKFTHAVVIVGYGRENGQDY 291

Query: 189 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 222
           WLV+NSWG      G+ K+ R  NN CGI   A Y
Sbjct: 292 WLVKNSWGRDWGLGGYIKMARNRNNHCGIASKASY 326



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)

Query: 930  GPDEGFFK---IERGNNACGIEQIAGYATIDV-VKNDETCSPYDLGHAVLLVGYGKQDDI 985
            GP+E   K   + +G  +  I+    +A+    V  + +C+     HAV++VGYG+++  
Sbjct: 230  GPNEEMLKHMVVTQGPVSVAIDASGRFASYGGGVYYNPSCARNKFTHAVVIVGYGRENGQ 289

Query: 986  PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 1021
             YWLV+NSWG      G+ K+ R  NN CGI   A Y
Sbjct: 290  DYWLVKNSWGRDWGLGGYIKMARNRNNHCGIASKASY 326


>gi|440907378|gb|ELR57532.1| Cathepsin W [Bos grunniens mutus]
          Length = 382

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 163/355 (45%), Gaps = 51/355 (14%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 704
           + E F+ F ++  R Y N  E   R + F Q+  K             +G ++FSD + E
Sbjct: 38  LKEVFRLFQMQYNRSYPNPAEYARRLDIFAQNLAKAQRLQEEDLGTAEFGVTQFSDLTEE 97

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E +   G         ++  +   V + +   E     P   DWRK        DQ  C 
Sbjct: 98  EFVQLYG--------SQVAGEALGVSRKVGSEEWGESEPRTCDWRKVGPISLVRDQRNCN 149

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKS--------QLVECAKQCSGCDGCF-FEPSIEY 815
            CWA + AG +E  +AIK    VE S          +L++C +  +GC G F ++  +  
Sbjct: 150 CCWAMAAAGNIEALWAIKFRHFVEVSVQRMAGGRGWELLDCDRCGNGCRGGFVWDAFLTV 209

Query: 816 THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLS 874
            + +GL SEKDYP+ + +G+  +C   K K K+   +DF+     E +M + L   GP++
Sbjct: 210 LNNSGLASEKDYPF-DGSGKTHRCLAKKYK-KVAWIQDFIILQACEQSMARHLATEGPIT 267

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------Q 914
           V +N  L+  Y    I+    TC P  + H+VLLVG+GK                    +
Sbjct: 268 VTINMTLLQQYQKGVIKATPTTCDPTQVDHSVLLVGFGKTKSGEGRQGKAASFGSYARPR 327

Query: 915 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKNDE--TCSP 967
            ++ YW ++NSWGP   +EG+F++ RG+N CGI +    A ++  K     +C P
Sbjct: 328 RSMAYWTLKNSWGPQWGEEGYFRLHRGSNTCGITKFPVTARVEKPKKQHQVSCPP 382



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 156/343 (45%), Gaps = 48/343 (13%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 338
           + E F+ F ++  R Y N  E   R + F Q+  K             +G ++FSD + E
Sbjct: 38  LKEVFRLFQMQYNRSYPNPAEYARRLDIFAQNLAKAQRLQEEDLGTAEFGVTQFSDLTEE 97

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E +   G         ++  +   V + +   E     P   DWRK        DQ  C 
Sbjct: 98  EFVQLYG--------SQVAGEALGVSRKVGSEEWGESEPRTCDWRKVGPISLVRDQRNCN 149

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKS--------QLVECAKQCSGCGGCDGLEQPIEY 450
            CWA + AG +E  +AIK    VE S          +L++C +  +GC G    +  +  
Sbjct: 150 CCWAMAAAGNIEALWAIKFRHFVEVSVQRMAGGRGWELLDCDRCGNGCRGGFVWDAFLTV 209

Query: 451 THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLS 509
            + +GL SEKDYP+ +G+G+  +C   K K K+   +DF+     E +M + L   GP++
Sbjct: 210 LNNSGLASEKDYPF-DGSGKTHRCLAKKYK-KVAWIQDFIILQACEQSMARHLATEGPIT 267

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------Q 549
           V +N  L+  Y    I+    TC P  + H+VLLVG+GK                    +
Sbjct: 268 VTINMTLLQQYQKGVIKATPTTCDPTQVDHSVLLVGFGKTKSGEGRQGKAASFGSYARPR 327

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
             + YW  +NSWGP   +EG+F++ RG+N CGI +    A ++
Sbjct: 328 RSMAYWTLKNSWGPQWGEEGYFRLHRGSNTCGITKFPVTARVE 370



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 124/245 (50%), Gaps = 32/245 (13%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS--------QL 63
           P   DWRK        DQ +C  CWA + AG +E  +AIK    VE S          +L
Sbjct: 128 PRTCDWRKVGPISLVRDQRNCNCCWAMAAAGNIEALWAIKFRHFVEVSVQRMAGGRGWEL 187

Query: 64  VECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           ++C +  +GC G F ++  +   + +GL SEKDYP+ + +G+  +C   K K K+   +D
Sbjct: 188 LDCDRCGNGCRGGFVWDAFLTVLNNSGLASEKDYPF-DGSGKTHRCLAKKYK-KVAWIQD 245

Query: 123 FLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           F+     E +M + L   GP++V +N  L+  Y    I+    TC P  + H+VLLVG+G
Sbjct: 246 FIILQACEQSMARHLATEGPITVTINMTLLQQYQKGVIKATPTTCDPTQVDHSVLLVGFG 305

Query: 182 K--------------------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 221
           K                    + ++ YW ++NSWGP   +EG+F++ RG+N CGI +   
Sbjct: 306 KTKSGEGRQGKAASFGSYARPRRSMAYWTLKNSWGPQWGEEGYFRLHRGSNTCGITKFPV 365

Query: 222 YATID 226
            A ++
Sbjct: 366 TARVE 370



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 20/82 (24%)

Query: 964  TCSPYDLGHAVLLVGYGK--------------------QDDIPYWLVRNSWGPIGPDEGF 1003
            TC P  + H+VLLVG+GK                    +  + YW ++NSWGP   +EG+
Sbjct: 289  TCDPTQVDHSVLLVGFGKTKSGEGRQGKAASFGSYARPRRSMAYWTLKNSWGPQWGEEGY 348

Query: 1004 FKIERGNNACGIEQIAGYATID 1025
            F++ RG+N CGI +    A ++
Sbjct: 349  FRLHRGSNTCGITKFPVTARVE 370


>gi|426379977|ref|XP_004056662.1| PREDICTED: pro-cathepsin H [Gorilla gorilla gorilla]
          Length = 335

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 153/314 (48%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           F++++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FRSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD  +      E M + +  Y P+S    +  D 
Sbjct: 204 TYPYQGKDGY---CKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IE
Sbjct: 260 MMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPKWGMNGYFLIE 316

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 317 RGKNMCGLAACASY 330



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 150/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           F++++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FRSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G    C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 204 TYPYQGKDGY---CKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 MMYRTGIYSSTSCHK-----TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPKWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 174 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGY---CKFQPGKAIGFV-KDVA 229

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 230 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAV 286

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 287 GYGEKNGIPYWIVKNSWGPKWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPKWGMNGYFLIERGKNMCGLAACASY 330


>gi|343476708|emb|CCD12273.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 363

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 26/319 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  PDA DWRKK    P  D+  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVTVST-GKAPDAVDWRKKGAVTPVRDERLC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
            S WAFS  G +EGQ+ +   +L   S+  L+ C  +  GC G   + + ++   +++  
Sbjct: 148 DSSWAFSAIGNIEGQWKVAGHELTSLSEQMLLSCDTREDGCGGGLMDRAFQWIVSSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLN 878
           + +E+ YPY + +G+  +C  +KS KV      D++     E  + + L K GP+++ + 
Sbjct: 208 VFTEQSYPYASTDGDVPRC--NKSGKVVGAKISDYVDLPQDENAIAEWLAKNGPVAIAVE 265

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +  +  Y G  +     +C    L H VLLVGY      PYW+++NSWG    +EG+ +I
Sbjct: 266 ATSLQRYTGGVL----TSCISEQLDHGVLLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRI 321

Query: 939 ERGNNACGIEQIAGYATID 957
           E+G N C ++  A  A + 
Sbjct: 322 EKGTNQCLMKNYASSAVVS 340



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 154/319 (48%), Gaps = 25/319 (7%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  PDA DWRKK    P  D+  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVTVST-GKAPDAVDWRKKGAVTPVRDERLC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
            S WAFS  G +EGQ+ +   +L   S+  L+ C  +  GCGG   D   Q I  +++  
Sbjct: 148 DSSWAFSAIGNIEGQWKVAGHELTSLSEQMLLSCDTREDGCGGGLMDRAFQWIVSSNKGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN 513
           + +E+ YPY + +G+  +C  +KS KV      D++     E  + + L K GP+++ + 
Sbjct: 208 VFTEQSYPYASTDGDVPRC--NKSGKVVGAKISDYVDLPQDENAIAEWLAKNGPVAIAVE 265

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           +  +  Y G  +     +C    L H VLLVGY      PYW+ +NSWG    +EG+ +I
Sbjct: 266 ATSLQRYTGGVL----TSCISEQLDHGVLLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRI 321

Query: 574 ERGNNACGIEQIAGYATID 592
           E+G N C ++  A  A + 
Sbjct: 322 EKGTNQCLMKNYASSAVVS 340



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 11/223 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  PDA DWRKK    P  D+  C S WAFS  G +EGQ+ +   +L   S+  L+ C  
Sbjct: 124 GKAPDAVDWRKKGAVTPVRDERLCDSSWAFSAIGNIEGQWKVAGHELTSLSEQMLLSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFL 124
           +  GC G   + + ++   +++  + +E+ YPY + +G+  +C  +KS KV      D++
Sbjct: 184 REDGCGGGLMDRAFQWIVSSNKGNVFTEQSYPYASTDGDVPRC--NKSGKVVGAKISDYV 241

Query: 125 HFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
                E  + + L K GP+++ + +  +  Y G  +     +C    L H VLLVGY   
Sbjct: 242 DLPQDENAIAEWLAKNGPVAIAVEATSLQRYTGGVL----TSCISEQLDHGVLLVGYDDT 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
              PYW+++NSWG    +EG+ +IE+G N C ++  A  A + 
Sbjct: 298 SKPPYWIIKNSWGKGWGEEGYIRIEKGTNQCLMKNYASSAVVS 340



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C    L H VLLVGY      PYW+++NSWG    +EG+ +IE+G N C ++  A  A 
Sbjct: 279  SCISEQLDHGVLLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRIEKGTNQCLMKNYASSAV 338

Query: 1024 ID 1025
            + 
Sbjct: 339  VS 340


>gi|297804580|ref|XP_002870174.1| hypothetical protein ARALYDRAFT_915142 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316010|gb|EFH46433.1| hypothetical protein ARALYDRAFT_915142 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 373

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 158/334 (47%), Gaps = 49/334 (14%)

Query: 650 DNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEF 698
           ++E++L     F  F  K  + YA  EE   RF  FK +  +            +G ++F
Sbjct: 44  NDEHLLNAEHHFSLFKSKYEKTYATQEEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQF 103

Query: 699 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 758
           SD +P+E   +  F   +R   R+  D +        +     +P  +DWR++    P  
Sbjct: 104 SDLTPKEF--RRKFLGLKRRGFRLPTDTQTAP-----ILPTSDLPTEFDWREQGAVTPVK 156

Query: 759 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFF 809
           +Q  CGSCW+FS  G LEG + + T +LV  S+ QLV+C  +C         SGC G   
Sbjct: 157 NQGMCGSCWSFSAIGALEGAHFLATKELVSLSEQQLVDCDHECDPAQANSCDSGCSGGLM 216

Query: 810 EPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILY 868
             + EY  +A GL  E+DYPY   +     C +DKSK+        +  +  + +   L 
Sbjct: 217 NNAFEYALKAGGLMKEEDYPYTGRDNT--ACKFDKSKIAASVSNFSVVSSDEDQIAANLV 274

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNI 917
           K+GPL++ +N+  +  Y G           PY       H VLLVG+G       +    
Sbjct: 275 KHGPLAIAINAMWMQTYIGG-------VSCPYVCSKSQDHGVLLVGFGSSGYAPIRLKEK 327

Query: 918 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQI 950
           PYW+++NSWG +  + G++KI RG +N CG++ +
Sbjct: 328 PYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTM 361



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 159/334 (47%), Gaps = 48/334 (14%)

Query: 284 DNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEF 332
           ++E++L     F  F  K  + YA  EE   RF  FK +  +            +G ++F
Sbjct: 44  NDEHLLNAEHHFSLFKSKYEKTYATQEEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQF 103

Query: 333 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 392
           SD +P+E   +  F   +R   R+  D +        +     +P  +DWR++    P  
Sbjct: 104 SDLTPKEF--RRKFLGLKRRGFRLPTDTQTAP-----ILPTSDLPTEFDWREQGAVTPVK 156

Query: 393 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--L 444
           +Q  CGSCW+FS  G LEG + + T +LV  S+ QLV+C  +C     + C  GC G  +
Sbjct: 157 NQGMCGSCWSFSAIGALEGAHFLATKELVSLSEQQLVDCDHECDPAQANSCDSGCSGGLM 216

Query: 445 EQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
               EY  +A GL  E+DYPY   +     C +DKSK+        +  +  + +   L 
Sbjct: 217 NNAFEYALKAGGLMKEEDYPYTGRDNT--ACKFDKSKIAASVSNFSVVSSDEDQIAANLV 274

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDI 552
           K+GPL++ +N+  +  Y G           PY       H VLLVG+G       +  + 
Sbjct: 275 KHGPLAIAINAMWMQTYIGG-------VSCPYVCSKSQDHGVLLVGFGSSGYAPIRLKEK 327

Query: 553 PYWLARNSWGPIGPDEGFFKIERG-NNACGIEQI 585
           PYW+ +NSWG +  + G++KI RG +N CG++ +
Sbjct: 328 PYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTM 361



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 118/231 (51%), Gaps = 31/231 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR++    P  +Q  CGSCW+FS  G LEG + + T +LV  S+ QLV+C  +C
Sbjct: 140 LPTEFDWREQGAVTPVKNQGMCGSCWSFSAIGALEGAHFLATKELVSLSEQQLVDCDHEC 199

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC G     + EY  +A GL  E+DYPY   +     C +DKSK+     
Sbjct: 200 DPAQANSCDSGCSGGLMNNAFEYALKAGGLMKEEDYPYTGRDNT--ACKFDKSKIAASVS 257

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +  +  + +   L K+GPL++ +N+  +  Y G           PY       H VL
Sbjct: 258 NFSVVSSDEDQIAANLVKHGPLAIAINAMWMQTYIGG-------VSCPYVCSKSQDHGVL 310

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQI 219
           LVG+G       +    PYW+++NSWG +  + G++KI RG +N CG++ +
Sbjct: 311 LVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTM 361



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 8/55 (14%)

Query: 972  HAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQI 1018
            H VLLVG+G       +  + PYW+++NSWG +  + G++KI RG +N CG++ +
Sbjct: 307  HGVLLVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTM 361


>gi|397133545|gb|AFO10079.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus S2]
          Length = 323

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 167/337 (49%), Gaps = 28/337 (8%)

Query: 632 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 685
           ++++  +   A+  S  +D       F+ F+ +  + Y ++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIN 61

Query: 686 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KDQNDSAKYEINKFSDLSKDETIAKYTGLSLPIQT--------QNFCKVIVLDQPPGKGP 113

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
             +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDFVDAG 173

Query: 804 CDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--S 860
           C+G     + E      G++ E DYPY+  N     C  + +K  L   KD   +     
Sbjct: 174 CNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN---CRMNSNKF-LVQVKDCYRYITVYE 229

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++NIPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 956
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 163/337 (48%), Gaps = 27/337 (8%)

Query: 266 DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 319
           ++++  +   A+  S  +D       F+ F+ +  + Y ++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIN 61

Query: 320 -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KDQNDSAKYEINKFSDLSKDETIAKYTGLSLPIQT--------QNFCKVIVLDQPPGKGP 113

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ Q+++C    +G
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDFVDAG 173

Query: 438 CGGCDGLEQPIE-YTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG-S 495
           C G   L    E      G++ E DYPY   N     C  + +K  +     + Y     
Sbjct: 174 CNG-GLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKFLVQVKDCYRYITVYE 229

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           E +K +L   GP+ + +++  I  Y    I+     C    L HAVLLVGYG +++IPYW
Sbjct: 230 EKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 591
             +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 119/221 (53%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ Q+++C  
Sbjct: 110 GKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GC+G     + E      G++ E DYPY+  N     C  + +K  L   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN---CRMNSNKF-LVQVKDCYRYI 225

Query: 128 G--SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 226 TVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 282 IPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IPYW  +N+WG    ++GFF++++  NACG+  ++A  A 
Sbjct: 262  CFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAV 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|48145879|emb|CAG33162.1| CTSH [Homo sapiens]
          Length = 335

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 152/314 (48%), Gaps = 36/314 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 709
           FK++  K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWTSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD  +      E M + +  Y P+S    +  D 
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 882 IHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           +    G     +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IE
Sbjct: 260 MMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIE 316

Query: 940 RGNNACGIEQIAGY 953
           RG N CG+   A Y
Sbjct: 317 RGKNMCGLAACASY 330



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 149/316 (47%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 343
           FK++  K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWTSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI TGK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+  +G    C +   K   F  KD   +     E M + +  Y P+S         
Sbjct: 204 TYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDF 259

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG+++ IPYW+ +NSWGP     G+F 
Sbjct: 260 MMYRTGIYSSTSCHK-----TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 114 GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 174 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVA 229

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 230 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAV 286

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 287 GYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|79331505|ref|NP_001032106.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|332009931|gb|AED97314.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 357

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 157/317 (49%), Gaps = 35/317 (11%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 708
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA   +  GC+G     + EY     GL++EK
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEK 227

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
            YPY   + E  K + +   V++    + +     + +K  +    P+S+    ++IH +
Sbjct: 228 AYPYTGKD-ETCKFSAENVGVQVLNSVN-ITLGAEDELKHAVGLVRPVSIAF--EVIHSF 283

Query: 886 NGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
               + K+    D  C  +P D+ HAVL VGYG +D +PYWL++NSWG    D+G+FK+E
Sbjct: 284 R---LYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKME 340

Query: 940 RGNNACGIEQIAGYATI 956
            G N C I   A Y  +
Sbjct: 341 MGKNMC-IATCASYPVV 356



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 148/312 (47%), Gaps = 24/312 (7%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 342
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY     GL++EK
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEK 227

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS-HLIHF 519
            YPY  G  E  K + +   V++    + +     + +K  +    P+S+     H    
Sbjct: 228 AYPY-TGKDETCKFSAENVGVQVLNSVN-ITLGAEDELKHAVGLVRPVSIAFEVIHSFRL 285

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
           Y       +    +P D+ HAVL VGYG +D +PYWL +NSWG    D+G+FK+E G N 
Sbjct: 286 YKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNM 345

Query: 580 CGIEQIAGYATI 591
           C I   A Y  +
Sbjct: 346 C-IATCASYPVV 356



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 119/227 (52%), Gaps = 17/227 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y    GK +  S+ QLV+CA
Sbjct: 138 EAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCA 197

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
              +  GC+G     + EY     GL++EK YPY   + E  K + +   V++    + +
Sbjct: 198 GAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVN-I 255

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLV 178
                + +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL V
Sbjct: 256 TLGAEDELKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYTDSHCGSTPMDVNHAVLAV 310

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GYG +D +PYWL++NSWG    D+G+FK+E G N C I   A Y  +
Sbjct: 311 GYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMC-IATCASYPVV 356


>gi|71482942|gb|AAZ32410.1| cysteine proteinase aleuran type [Nicotiana benthamiana]
          Length = 360

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 145/312 (46%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKK---HERYGTSEFSDRSPEEILCK 709
           F  F  + G++Y   EEIK+RFE F  +      H K     + G +EF+D         
Sbjct: 61  FARFAHRYGKRYETVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD--------- 111

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPV-PDAWDWRKKNVTGPAGDQAACGSCWA 768
               W E   +R+ A +         ++    V P+  DWR+  +  P  +Q  CGSCW 
Sbjct: 112 --ITWDEFRRDRLGAAQNCSATTKGNLKLTNVVLPETKDWREAGIVSPVKNQGKCGSCWT 169

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA   +  GC+G     + EY     GL++E+
Sbjct: 170 FSTTGALEAAYGQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTEE 229

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHD 884
            YPY   NG   K + +   VK+    + +     + +K  +    P+S+          
Sbjct: 230 AYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAEDELKYAVALVRPVSIAFEVIKGFKQ 287

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y        +   +P D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N 
Sbjct: 288 YKSGVYTSTECGNTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNM 347

Query: 945 CGIEQIAGYATI 956
           CGI   A Y  +
Sbjct: 348 CGIATCASYPVV 359



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 145/317 (45%), Gaps = 35/317 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKK---HERYGTSEFSDRSPEEILCK 343
           F  F  + G++Y   EEIK+RFE F  +      H K     + G +EF+D         
Sbjct: 61  FARFAHRYGKRYETVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD--------- 111

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPV-PDAWDWRKKNVTGPAGDQAACGSCWA 402
               W E   +R+ A +         ++    V P+  DWR+  +  P  +Q  CGSCW 
Sbjct: 112 --ITWDEFRRDRLGAAQNCSATTKGNLKLTNVVLPETKDWREAGIVSPVKNQGKCGSCWT 169

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY     GL++E+
Sbjct: 170 FSTTGALEAAYGQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTEE 229

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSV------GLNS 514
            YPY   NG   K + +   VK+    + +     + +K  +    P+S+      G   
Sbjct: 230 AYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAEDELKYAVALVRPVSIAFEVIKGFKQ 287

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
           +    Y  T         +P D+ HAVL VGYG ++ +PYWL +NSWG    D G+FK+E
Sbjct: 288 YKSGVYTSTECGN-----TPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKME 342

Query: 575 RGNNACGIEQIAGYATI 591
            G N CGI   A Y  +
Sbjct: 343 MGKNMCGIATCASYPVV 359



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 110/219 (50%), Gaps = 6/219 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y    GK +  S+ QLV+CA   
Sbjct: 143 LPETKDWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYGQAFGKGISLSEQQLVDCAGAF 202

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +  GC+G     + EY     GL++E+ YPY   NG   K + +   VK+    + +   
Sbjct: 203 NNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLG 260

Query: 128 GSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
             + +K  +    P+S+          Y        +   +P D+ HAVL VGYG ++ +
Sbjct: 261 AEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGNTPMDVNHAVLAVGYGVENGV 320

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 321 PYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVV 359


>gi|33333702|gb|AAQ11969.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 158/314 (50%), Gaps = 33/314 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 334
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +  G  GC G  + Q  ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             G+++E+ YPY    G +  C   KS   +   K +++    + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 513 NSHLIHFYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +  + FY+   +   DE C       DL H VL+VGYG ++ + YW+ +NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 569 GFFKIERGNNACGI 582
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 34/314 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 700
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFEPSIEYTH 817
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +    +GC G     + ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             G+++E+ YPY+   G +  C   KS   +   K ++     + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 878 NSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +  +  Y+   +   DE C       DL H VL+VGYG ++ + YW+V+NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 934 GFFKIERGNNACGI 947
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 15/211 (7%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 69
           DA DWR++    P  DQA+CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +   
Sbjct: 114 DAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYG 173

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K ++     
Sbjct: 174 NNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDE 228

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDN 185
           + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VGYG ++ 
Sbjct: 229 QEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVGYGSENG 285

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 286 VDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 35/47 (74%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            DL H VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 270  DLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|203341|gb|AAA63484.1| cathepsin H [Rattus norvegicus]
          Length = 298

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 134/273 (49%), Gaps = 19/273 (6%)

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           + G ++FSD S  EI  K  + WSE   +   A +         +   GP P + DWRKK
Sbjct: 39  KMGLNQFSDMSFAEI--KHKYLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKK 88

Query: 752 -NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCF 808
            NV  P  +Q ACGSCW FS  G LE   AI +GK++  ++ QLV+CA+  +  GC G  
Sbjct: 89  GNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGL 148

Query: 809 FEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKI 866
              + EY  +  G+  E  YPY   NG+   C ++  K   F      +  N    M + 
Sbjct: 149 PSQAFEYILYNKGIMGEDSYPYIGKNGQ---CKFNPEKAVAFVKNVVNITLNDEAAMVEA 205

Query: 867 LYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNS 925
           +  Y P+S     ++    Y       N    +P  + HAVL VGYG+Q+ + YW+V+NS
Sbjct: 206 VALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNS 265

Query: 926 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
           WG    + G+F IERG N CG+   A Y    V
Sbjct: 266 WGSNWGNNGYFLIERGKNMCGLAACASYPIPQV 298



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 132/273 (48%), Gaps = 18/273 (6%)

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           + G ++FSD S  EI  K  + WSE   +   A +         +   GP P + DWRKK
Sbjct: 39  KMGLNQFSDMSFAEI--KHKYLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKK 88

Query: 386 -NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL 444
            NV  P  +Q ACGSCW FS  G LE   AI +GK++  ++ QLV+CA+  +  G   GL
Sbjct: 89  GNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGL 148

Query: 445 -EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKI 501
             Q  EY  +  G+  E  YPY   NG+   C ++  K   F      +  N    M + 
Sbjct: 149 PSQAFEYILYNKGIMGEDSYPYIGKNGQ---CKFNPEKAVAFVKNVVNITLNDEAAMVEA 205

Query: 502 LYKYGPLSVGLN-SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNS 560
           +  Y P+S     +     Y       N    +P  + HAVL VGYG+Q+ + YW+ +NS
Sbjct: 206 VALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNS 265

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 593
           WG    + G+F IERG N CG+   A Y    V
Sbjct: 266 WGSNWGNNGYFLIERGKNMCGLAACASYPIPQV 298



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 114/225 (50%), Gaps = 9/225 (4%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK NV  P  +Q  CGSCW FS  G LE   AI +GK++  ++ QLV+CA
Sbjct: 77  GPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCA 136

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPY   NG+   C ++  K   F      
Sbjct: 137 QNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQ---CKFNPEKAVAFVKNVVN 193

Query: 124 LHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +  N    M + +  Y P+S     ++    Y       N    +P  + HAVL VGYG+
Sbjct: 194 ITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGE 253

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           Q+ + YW+V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 254 QNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLAACASYPIPQV 298



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 39/61 (63%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            +P  + HAVL VGYG+Q+ + YW+V+NSWG    + G+F IERG N CG+   A Y    
Sbjct: 238  TPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLAACASYPIPQ 297

Query: 1026 V 1026
            V
Sbjct: 298  V 298


>gi|449452572|ref|XP_004144033.1| PREDICTED: thiol protease aleurain-like [Cucumis sativus]
 gi|449500499|ref|XP_004161114.1| PREDICTED: thiol protease aleurain-like [Cucumis sativus]
          Length = 356

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 143/312 (45%), Gaps = 26/312 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILCK 709
           F  F  + G++Y   EE+K RF  F +        +K+   Y  G ++F+D + EE    
Sbjct: 57  FARFAHRYGKKYETAEEMKLRFGIFLESLELIKSTNKQGLSYKLGVNQFADWTWEEF--- 113

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                  R +    A              D  +P++ DWRK  +  P  DQ  CGSCW F
Sbjct: 114 -------RKHRLGAAQNCSATTKGSHKLTDTALPESKDWRKDGIVSPVKDQGHCGSCWTF 166

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKD 826
           S  G LE  YA   GK +  S+ QLV+C +  +  GC+G     + EY  +  GL++E+ 
Sbjct: 167 STTGALEAAYAQAHGKGISLSEQQLVDCGRGFNNFGCNGGLPSQAFEYIKYNGGLDTEEA 226

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNS-DLIHD 884
           YPY   +G    C +    V +       +     + +K  +    P+SV          
Sbjct: 227 YPYTGVDGS---CKFVPENVGVQVIDSVNITLGAEDELKHAVAFVRPVSVAFEVVSGFRL 283

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y+      N    +P D+ HAVL VGYG +D IPYWL++NSWG    D G+FK+E G N 
Sbjct: 284 YSKGVYTSNSCGSTPMDVNHAVLAVGYGVEDGIPYWLIKNSWGGNWGDNGYFKMEMGKNM 343

Query: 945 CGIEQIAGYATI 956
           CG+   A Y  +
Sbjct: 344 CGVATCASYPIV 355



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 142/312 (45%), Gaps = 25/312 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILCK 343
           F  F  + G++Y   EE+K RF  F +        +K+   Y  G ++F+D + EE    
Sbjct: 57  FARFAHRYGKKYETAEEMKLRFGIFLESLELIKSTNKQGLSYKLGVNQFADWTWEEF--- 113

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                  R +    A              D  +P++ DWRK  +  P  DQ  CGSCW F
Sbjct: 114 -------RKHRLGAAQNCSATTKGSHKLTDTALPESKDWRKDGIVSPVKDQGHCGSCWTF 166

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKD 461
           S  G LE  YA   GK +  S+ QLV+C +  +  G   GL  Q  EY  +  GL++E+ 
Sbjct: 167 STTGALEAAYAQAHGKGISLSEQQLVDCGRGFNNFGCNGGLPSQAFEYIKYNGGLDTEEA 226

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-HLIHF 519
           YPY   +G    C +    V +          G+E  +K  +    P+SV          
Sbjct: 227 YPYTGVDGS---CKFVPENVGVQVIDSVNITLGAEDELKHAVAFVRPVSVAFEVVSGFRL 283

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
           Y+      N    +P D+ HAVL VGYG +D IPYWL +NSWG    D G+FK+E G N 
Sbjct: 284 YSKGVYTSNSCGSTPMDVNHAVLAVGYGVEDGIPYWLIKNSWGGNWGDNGYFKMEMGKNM 343

Query: 580 CGIEQIAGYATI 591
           CG+   A Y  +
Sbjct: 344 CGVATCASYPIV 355



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 112/223 (50%), Gaps = 8/223 (3%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P++ DWRK  +  P  DQ  CGSCW FS  G LE  YA   GK +  S+ QLV+C 
Sbjct: 136 DTALPESKDWRKDGIVSPVKDQGHCGSCWTFSTTGALEAAYAQAHGKGISLSEQQLVDCG 195

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC+G     + EY  +  GL++E+ YPY   +G    C +    V +       
Sbjct: 196 RGFNNFGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGVDGS---CKFVPENVGVQVIDSVN 252

Query: 124 LHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +     + +K  +    P+SV          Y+      N    +P D+ HAVL VGYG 
Sbjct: 253 ITLGAEDELKHAVAFVRPVSVAFEVVSGFRLYSKGVYTSNSCGSTPMDVNHAVLAVGYGV 312

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +D IPYWL++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 313 EDGIPYWLIKNSWGGNWGDNGYFKMEMGKNMCGVATCASYPIV 355


>gi|20136379|gb|AAM11647.1|AF490984_1 cathepsin L, partial [Fasciola hepatica]
          Length = 311

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 116/222 (52%), Gaps = 12/222 (5%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
            VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+  
Sbjct: 92  AVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGP 151

Query: 70  C--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHF 126
              +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG   +H 
Sbjct: 152 WGNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGYYTVHS 208

Query: 127 NGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
                +K ++   GP +V ++  SD +   +G       +TCSP  + HAVL VGYG QD
Sbjct: 209 GSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGTQD 265

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
              YW+V+NSWG    + G+ ++ R   N CGI  +A  A +
Sbjct: 266 GTDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASLASVAMV 307



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 115/222 (51%), Gaps = 12/222 (5%)

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
            VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+  
Sbjct: 92  AVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGP 151

Query: 801 C--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHF 857
              +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG   +H 
Sbjct: 152 WGNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGYYTVHS 208

Query: 858 NGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 915
                +K ++   GP +V ++  SD +   +G       +TCSP  + HAVL VGYG QD
Sbjct: 209 GSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGTQD 265

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
              YW+V+NSWG    + G+ ++ R   N CGI  +A  A +
Sbjct: 266 GTDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASLASVAMV 307



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 15/224 (6%)

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
            VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+  
Sbjct: 92  AVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGP 151

Query: 435 CSGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLY 491
             G  GC G  +E   +Y  Q GLE+E  YPY    G+   C Y+K   V   TG  +  
Sbjct: 152 W-GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGY-YTV 206

Query: 492 FNGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
            +GSE  +K ++   GP +V ++  S  + + +G       +TCSP  + HAVL VGYG 
Sbjct: 207 HSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGT 263

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           QD   YW+ +NSWG    + G+ ++ R   N CGI  +A  A +
Sbjct: 264 QDGTDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASLASVAMV 307



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 17/107 (15%)

Query: 934  GFFKIERGN-----NACGIEQIAGYATIDV----------VKNDETCSPYDLGHAVLLVG 978
            G++ +  G+     N  G E  A  A +DV          +   +TCSP  + HAVL VG
Sbjct: 202  GYYTVHSGSEVELKNLVGAEGPAAVA-VDVESDFMMYRSGIYQSQTCSPLRVNHAVLAVG 260

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
            YG QD   YW+V+NSWG    + G+ ++ R   N CGI  +A  A +
Sbjct: 261  YGTQDGTDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASLASVAMV 307


>gi|33333698|gb|AAQ11967.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 158/314 (50%), Gaps = 33/314 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 334
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +  G  GC G  + Q  ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQ 190

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             G+++E+ YPY    G +  C   KS   +   K +++    + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 513 NSHLIHFYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +  + FY+   +   DE C       DL H VL+VGYG ++ + YW+ +NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DEKCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 569 GFFKIERGNNACGI 582
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 34/314 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 700
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFEPSIEYTH 817
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +    +GC G     + ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQ 190

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             G+++E+ YPY+   G +  C   KS   +   K ++     + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 878 NSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +  +  Y+   +   DE C       DL H VL+VGYG ++ + YW+V+NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DEKCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 934 GFFKIERGNNACGI 947
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 15/211 (7%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 69
           DA DWR++    P  DQA+CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +   
Sbjct: 114 DAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYG 173

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K ++     
Sbjct: 174 NNGCRGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTYVFPLDE 228

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDN 185
           + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VGYG ++ 
Sbjct: 229 QEMARTVAAKGPVAVAIEASQLSFYDKGIV---DEKCRCSNKREDLNHGVLVVGYGSENG 285

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 286 VDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 35/47 (74%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            DL H VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 270  DLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|27728675|gb|AAO18731.1| cysteine protease [Gossypium hirsutum]
          Length = 389

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 156/323 (48%), Gaps = 28/323 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFK------------QDGHKKHERYGTSEFS 699
           E +LE F+ +  K  + Y + EE ++RFE FK            +  +K     G ++F+
Sbjct: 43  ERVLEIFQQWKEKHRKVYRHAEEAEKRFENFKGNLKYILERNAKRKANKWEHHVGLNKFA 102

Query: 700 DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 759
           D S EE       K  +   + I   R    K+     +    P + DWR   V     D
Sbjct: 103 DMSNEEFRKAYLSKVKKPINKGITLSRNMRRKV-----QSCDAPSSLDWRNYGVVTAVKD 157

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQ 818
           Q +CGSCWAFS  G +EG  A+ TG L+  S+ +LVEC     GC+G + + + E+  + 
Sbjct: 158 QGSCGSCWAFSSTGAMEGINALVTGDLISLSEQELVECDTSNYGCEGGYMDYAFEWVINN 217

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
            G++SE DYPY   +G    C   K + K+ +   +     S++         P+SV ++
Sbjct: 218 GGIDSESDYPYTGVDG---TCNTTKEETKVVSIDGYQDVEQSDSALLCAVAQQPVSVGID 274

Query: 879 SDLIHDYNGTPIRKNDETCS--PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFF 936
              I D+        D +CS  P D+ HAVL+VGYG +D+  YW+V+NSWG     +G+F
Sbjct: 275 GSAI-DFQLYTGGIYDGSCSDDPDDIDHAVLIVGYGSEDSEEYWIVKNSWGTSWGIDGYF 333

Query: 937 KIERGNN----ACGIEQIAGYAT 955
            ++R  +     C +  +A Y T
Sbjct: 334 YLKRDTDLPYGVCAVNAMASYPT 356



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 154/326 (47%), Gaps = 33/326 (10%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFK------------QDGHKKHERYGTSEFS 333
           E +LE F+ +  K  + Y + EE ++RFE FK            +  +K     G ++F+
Sbjct: 43  ERVLEIFQQWKEKHRKVYRHAEEAEKRFENFKGNLKYILERNAKRKANKWEHHVGLNKFA 102

Query: 334 DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 393
           D S EE       K  +   + I   R    K+     +    P + DWR   V     D
Sbjct: 103 DMSNEEFRKAYLSKVKKPINKGITLSRNMRRKV-----QSCDAPSSLDWRNYGVVTAVKD 157

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT-H 452
           Q +CGSCWAFS  G +EG  A+ TG L+  S+ +LVEC     GC G   ++   E+  +
Sbjct: 158 QGSCGSCWAFSSTGAMEGINALVTGDLISLSEQELVECDTSNYGCEG-GYMDYAFEWVIN 216

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             G++SE DYPY   +G    C   K + K+ +   +     S++         P+SVG+
Sbjct: 217 NGGIDSESDYPYTGVDG---TCNTTKEETKVVSIDGYQDVEQSDSALLCAVAQQPVSVGI 273

Query: 513 NSHLIHF--YNGTPIRKNDETCS--PYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           +   I F  Y G      D +CS  P D+ HAVL+VGYG +D   YW+ +NSWG     +
Sbjct: 274 DGSAIDFQLYTGGIY---DGSCSDDPDDIDHAVLIVGYGSEDSEEYWIVKNSWGTSWGID 330

Query: 569 GFFKIERGNN----ACGIEQIAGYAT 590
           G+F ++R  +     C +  +A Y T
Sbjct: 331 GYFYLKRDTDLPYGVCAVNAMASYPT 356



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 115/221 (52%), Gaps = 11/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P + DWR   V     DQ  CGSCWAFS  G +EG  A+ TG L+  S+ +LVEC    
Sbjct: 140 APSSLDWRNYGVVTAVKDQGSCGSCWAFSSTGAMEGINALVTGDLISLSEQELVECDTSN 199

Query: 71  SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G + + + E+  +  G++SE DYPY   +G    C   K + K+ +   +     S
Sbjct: 200 YGCEGGYMDYAFEWVINNGGIDSESDYPYTGVDG---TCNTTKEETKVVSIDGYQDVEQS 256

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS--PYDLGHAVLLVGYGKQDNIP 187
           ++         P+SV ++   I D+        D +CS  P D+ HAVL+VGYG +D+  
Sbjct: 257 DSALLCAVAQQPVSVGIDGSAI-DFQLYTGGIYDGSCSDDPDDIDHAVLIVGYGSEDSEE 315

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNN----ACGIEQIAGYAT 224
           YW+V+NSWG     +G+F ++R  +     C +  +A Y T
Sbjct: 316 YWIVKNSWGTSWGIDGYFYLKRDTDLPYGVCAVNAMASYPT 356



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 6/68 (8%)

Query: 962  DETCS--PYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNN----ACGI 1015
            D +CS  P D+ HAVL+VGYG +D   YW+V+NSWG     +G+F ++R  +     C +
Sbjct: 289  DGSCSDDPDDIDHAVLIVGYGSEDSEEYWIVKNSWGTSWGIDGYFYLKRDTDLPYGVCAV 348

Query: 1016 EQIAGYAT 1023
              +A Y T
Sbjct: 349  NAMASYPT 356


>gi|25956267|dbj|BAC41322.1| hypothetical protein [Lotus japonicus]
          Length = 358

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 147/322 (45%), Gaps = 47/322 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 709
           F  F  + G+ YA +EE   RF  FK + H+            +G ++FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTQFSDLTPME---- 100

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F+ S      +    +     ++  +    +P  +DWR      P  +Q +CGSCW+F
Sbjct: 101 --FQHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWRGHGAVTPVKNQGSCGSCWSF 155

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG---------CFFEPSIEYT-HQA 819
           S  G LEG + + TG+LV  S+ QLV+C  QC   +               + EY  +  
Sbjct: 156 SATGALEGAHFLSTGELVSLSEQQLVDCDHQCDPEEAGSCGSGCNGGLMNSAFEYILNNG 215

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           G+  E+DYPY   NG    C +DK+K+        +     + +   L K GPL+V +N+
Sbjct: 216 GVMREEDYPYSGTNGG--TCKFDKAKIAASVANFSVVSRDEDQIAANLVKNGPLAVAINA 273

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQD-------NIPYWLVRNSWGP 928
             +  Y G           PY     L H VLLVGYG +          PYW+++NSWG 
Sbjct: 274 VYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGE 326

Query: 929 IGPDEGFFKIERGNNACGIEQI 950
              + G++KI RG N CG++ +
Sbjct: 327 NWGENGYYKICRGRNICGVDSM 348



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 145/322 (45%), Gaps = 46/322 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 343
           F  F  + G+ YA +EE   RF  FK + H+            +G ++FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTQFSDLTPME---- 100

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F+ S      +    +     ++  +    +P  +DWR      P  +Q +CGSCW+F
Sbjct: 101 --FQHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWRGHGAVTPVKNQGSCGSCWSF 155

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--------SGCGGCDGLEQPIEYT-HQA 454
           S  G LEG + + TG+LV  S+ QLV+C  QC                +    EY  +  
Sbjct: 156 SATGALEGAHFLSTGELVSLSEQQLVDCDHQCDPEEAGSCGSGCNGGLMNSAFEYILNNG 215

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           G+  E+DYPY   NG    C +DK+K+        +     + +   L K GPL+V +N+
Sbjct: 216 GVMREEDYPYSGTNGG--TCKFDKAKIAASVANFSVVSRDEDQIAANLVKNGPLAVAINA 273

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQD-------DIPYWLARNSWGP 563
             +  Y G           PY     L H VLLVGYG +          PYW+ +NSWG 
Sbjct: 274 VYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGE 326

Query: 564 IGPDEGFFKIERGNNACGIEQI 585
              + G++KI RG N CG++ +
Sbjct: 327 NWGENGYYKICRGRNICGVDSM 348



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 111/230 (48%), Gaps = 30/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR      P  +Q  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C  QC
Sbjct: 128 LPKDFDWRGHGAVTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHQC 187

Query: 71  SGCDG---------CFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
              +               + EY  +  G+  E+DYPY   NG    C +DK+K+     
Sbjct: 188 DPEEAGSCGSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNGG--TCKFDKAKIAASVA 245

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 246 NFSVVSRDEDQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYVCSKKLNHGVL 298

Query: 177 LVGYGKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 299 LVGYGSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSM 348



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYGKQD-------DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 293  LNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSM 348


>gi|226469954|emb|CAX70258.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 155/324 (47%), Gaps = 28/324 (8%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSD 700
           NI   +K F +   R Y N  E  +RF  F  +  K  E            + G + F+D
Sbjct: 57  NIGAAWKFFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTD 116

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
           ++  E+    G+    R+  RI     K +       +   +PD  DWR+     P  +Q
Sbjct: 117 KTEYELRKLRGY----RSACRIA----KPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQ 168

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH- 817
             CGSCWAFS  G +EGQ+  KT +LV  S+ QL++C+K    +GC+G   + + +Y   
Sbjct: 169 GQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRD 228

Query: 818 QAGLESEKDYPYKNANG-EKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSV 875
             G++SE  YPY + +G E  +C ++ + +    TG   +H      +   +   GP+SV
Sbjct: 229 NEGIDSEISYPYISGDGDENVRCLFNFTNIMAQVTGYINIHEGDERALMNAVTTIGPVSV 288

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPY--DLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +N+ L           +D  C+    DL H VLLVGYG +D  PYWL++NSWG    D+
Sbjct: 289 AINAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDK 348

Query: 934 GFFKIER-GNNACGIEQIAGYATI 956
           G+ KI +   N C +   A Y  +
Sbjct: 349 GYVKILKDSKNMCSVASAASYPLV 372



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 156/325 (48%), Gaps = 29/325 (8%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSD 334
           NI   +K F +   R Y N  E  +RF  F  +  K  E            + G + F+D
Sbjct: 57  NIGAAWKFFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTD 116

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
           ++  E+    G+    R+  RI     K +       +   +PD  DWR+     P  +Q
Sbjct: 117 KTEYELRKLRGY----RSACRIA----KPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQ 168

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCWAFS  G +EGQ+  KT +LV  S+ QL++C+K   G  GC+G  ++   +Y  
Sbjct: 169 GQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSY-GNNGCEGGLMDLAFQYVR 227

Query: 453 -QAGLESEKDYPYRNGNG-EKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLS 509
              G++SE  YPY +G+G E  +C ++ + +    TG   ++      +   +   GP+S
Sbjct: 228 DNEGIDSEISYPYISGDGDENVRCLFNFTNIMAQVTGYINIHEGDERALMNAVTTIGPVS 287

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY--DLGHAVLLVGYGKQDDIPYWLARNSWGPIGPD 567
           V +N+ L  F        +D  C+    DL H VLLVGYG +D  PYWL +NSWG    D
Sbjct: 288 VAINAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGD 347

Query: 568 EGFFKIER-GNNACGIEQIAGYATI 591
           +G+ KI +   N C +   A Y  +
Sbjct: 348 KGYVKILKDSKNMCSVASAASYPLV 372



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 119/223 (53%), Gaps = 8/223 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR+     P  +Q  CGSCWAFS  G +EGQ+  KT +LV  S+ QL++C+K  
Sbjct: 150 LPDRVDWRRNGAVTPVKNQGQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSY 209

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-EKFKCAYDKSKVKL-FTGKDFLH 125
             +GC+G   + + +Y     G++SE  YPY + +G E  +C ++ + +    TG   +H
Sbjct: 210 GNNGCEGGLMDLAFQYVRDNEGIDSEISYPYISGDGDENVRCLFNFTNIMAQVTGYINIH 269

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY--DLGHAVLLVGYGKQ 183
                 +   +   GP+SV +N+ L           +D  C+    DL H VLLVGYG +
Sbjct: 270 EGDERALMNAVTTIGPVSVAINAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIE 329

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           D  PYWL++NSWG    D+G+ KI +   N C +   A Y  +
Sbjct: 330 DGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCSVASAASYPLV 372



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 1024
            DL H VLLVGYG +D  PYWL++NSWG    D+G+ KI +   N C +   A Y  +
Sbjct: 316  DLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCSVASAASYPLV 372


>gi|40806502|gb|AAR92156.1| putative cysteine protease 3 [Iris x hollandica]
          Length = 292

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 49/290 (16%)

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAW 746
           +G ++FSD +P E          +RTY  +     K +K L+    + P+      P+ +
Sbjct: 16  HGVTQFSDLTPGEF---------KRTYLGL----RKGKKHLVGSAHEAPLLPTNDLPEDF 62

Query: 747 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 801
           DWR K       +Q +CGSCW+FS +G LEG   + TGKL   S+ Q+V+C  +C     
Sbjct: 63  DWRDKGAVTGVKNQGSCGSCWSFSTSGALEGANFLATGKLETLSEQQMVDCDHECDAEEP 122

Query: 802 ----SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 856
                GC+G     + +Y  +  GLESEKDYPY     ++  C +D+SK+K       + 
Sbjct: 123 DDCDQGCNGGLMNTAFQYLQKVGGLESEKDYPYTGT--DRGTCKFDESKIKASVHNFSVV 180

Query: 857 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 912
               E +   L K+GPL++ +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 181 SIDEEQIAANLVKHGPLAIAINAVFMQTYIGG-------VSCPYICGKHLDHGVLLVGYG 233

Query: 913 -------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 955
                  +    PYW+++NSWG    + G++KI RG N CG++ +    T
Sbjct: 234 SAGYAPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSMVSTVT 283



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 48/290 (16%)

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAW 380
           +G ++FSD +P E          +RTY  +     K +K L+    + P+      P+ +
Sbjct: 16  HGVTQFSDLTPGEF---------KRTYLGL----RKGKKHLVGSAHEAPLLPTNDLPEDF 62

Query: 381 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG--- 437
           DWR K       +Q +CGSCW+FS +G LEG   + TGKL   S+ Q+V+C  +C     
Sbjct: 63  DWRDKGAVTGVKNQGSCGSCWSFSTSGALEGANFLATGKLETLSEQQMVDCDHECDAEEP 122

Query: 438 --CG-GCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY 491
             C  GC+G  +    +Y  +  GLESEKDYPY     ++  C +D+SK+K       + 
Sbjct: 123 DDCDQGCNGGLMNTAFQYLQKVGGLESEKDYPYT--GTDRGTCKFDESKIKASVHNFSVV 180

Query: 492 FNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG 547
               E +   L K+GPL++ +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 181 SIDEEQIAANLVKHGPLAIAINAVFMQTYIGG-------VSCPYICGKHLDHGVLLVGYG 233

Query: 548 -------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 590
                  +  + PYW+ +NSWG    + G++KI RG N CG++ +    T
Sbjct: 234 SAGYAPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSMVSTVT 283



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 119/235 (50%), Gaps = 30/235 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR K       +Q  CGSCW+FS +G LEG   + TGKL   S+ Q+V+C  +C
Sbjct: 58  LPEDFDWRDKGAVTGVKNQGSCGSCWSFSTSGALEGANFLATGKLETLSEQQMVDCDHEC 117

Query: 71  ---------SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                     GC+G     + +Y  +  GLESEKDYPY     ++  C +D+SK+K    
Sbjct: 118 DAEEPDDCDQGCNGGLMNTAFQYLQKVGGLESEKDYPYTGT--DRGTCKFDESKIKASVH 175

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     E +   L K+GPL++ +N+  +  Y G           PY     L H VL
Sbjct: 176 NFSVVSIDEEQIAANLVKHGPLAIAINAVFMQTYIGG-------VSCPYICGKHLDHGVL 228

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +    T
Sbjct: 229 LVGYGSAGYAPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSMVSTVT 283



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 7/61 (11%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 1022
            L H VLLVGYG       +  + PYW+++NSWG    + G++KI RG N CG++ +    
Sbjct: 223  LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSMVSTV 282

Query: 1023 T 1023
            T
Sbjct: 283  T 283


>gi|9627870|ref|NP_054157.1| viral cathepsin-like protein [Autographa californica
           nucleopolyhedrovirus]
 gi|114680178|ref|YP_758591.1| viral cathepsin [Plutella xylostella multiple nucleopolyhedrovirus]
 gi|115751|sp|P25783.1|CATV_NPVAC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|332491|gb|AAA46752.1| viral cathepsin [Autographa californica nucleopolyhedrovirus]
 gi|559196|gb|AAA66757.1| viral cathepsin-like protein [Autographa californica
           nucleopolyhedrovirus]
 gi|113015253|gb|ABE68510.1| viral cathepsin [Plutella xylostella multiple nucleopolyhedrovirus]
          Length = 323

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 157/311 (50%), Gaps = 28/311 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 709
           F+ F+ +  + Y ++ E   RF+ F+ +             +Y  ++FSD S +E + K 
Sbjct: 28  FEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQNDSAKYEINKFSDLSKDETIAKY 87

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWAF
Sbjct: 88  TGLSLPIQT--------QNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAF 139

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYP 828
           +    LE Q+AIK  +L+  S+ Q+++C    +GC+G     + E      G++ E DYP
Sbjct: 140 ATLASLESQFAIKHNQLINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYP 199

Query: 829 YKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETMKKILYKYGPLSVLLNSDLIHDYN 886
           Y+  N     C  + +K  L   KD   +     E +K +L   GP+ + +++  I +Y 
Sbjct: 200 YEADNNN---CRMNSNKF-LVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYK 255

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
              I+     C    L HAVLLVGYG ++NIPYW  +N+WG    ++GFF++++  NACG
Sbjct: 256 QGIIK----YCFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACG 311

Query: 947 IE-QIAGYATI 956
           +  ++A  A I
Sbjct: 312 MRNELASTAVI 322



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 27/311 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 343
           F+ F+ +  + Y ++ E   RF+ F+ +             +Y  ++FSD S +E + K 
Sbjct: 28  FEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQNDSAKYEINKFSDLSKDETIAKY 87

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWAF
Sbjct: 88  TGLSLPIQT--------QNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAF 139

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIE-YTHQAGLESEKDY 462
           +    LE Q+AIK  +L+  S+ Q+++C    +GC G   L    E      G++ E DY
Sbjct: 140 ATLASLESQFAIKHNQLINLSEQQMIDCDFVDAGCNG-GLLHTAFEAIIKMGGVQLESDY 198

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG-SETMKKILYKYGPLSVGLNSHLIHFYN 521
           PY   N     C  + +K  +     + Y     E +K +L   GP+ + +++  I  Y 
Sbjct: 199 PYEADNN---NCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYK 255

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
              I+     C    L HAVLLVGYG +++IPYW  +N+WG    ++GFF++++  NACG
Sbjct: 256 QGIIK----YCFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACG 311

Query: 582 IE-QIAGYATI 591
           +  ++A  A I
Sbjct: 312 MRNELASTAVI 322



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 119/221 (53%), Gaps = 12/221 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR+ N      +Q  CG+CWAF+    LE Q+AIK  +L+  S+ Q+++C  
Sbjct: 110 GKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF 169

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GC+G     + E      G++ E DYPY+  N     C  + +K  L   KD   + 
Sbjct: 170 VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN---CRMNSNKF-LVQVKDCYRYI 225

Query: 128 G--SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               E +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++N
Sbjct: 226 TVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENN 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 225
           IPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 282 IPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYAT 1023
            C    L HAVLLVGYG +++IPYW  +N+WG    ++GFF++++  NACG+  ++A  A 
Sbjct: 262  CFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAV 321

Query: 1024 I 1024
            I
Sbjct: 322  I 322


>gi|13124011|sp|Q9YWK4.1|CATV_NPVBS RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|3882976|gb|AAC77812.1| cathepsin [Buzura suppressaria NPV]
          Length = 331

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 154/311 (49%), Gaps = 24/311 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 709
           F+ F+    + Y +  E + RF  F+Q   + + +        Y  ++F+D S  EI+ K
Sbjct: 31  FETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISK 90

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
            TG     +T            K ++  +  G  P  +DWR++N      +Q ACG+CWA
Sbjct: 91  YTGLNMPVQT--------TNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWA 142

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG-LESEKDY 827
           F+    +E QYAIK    ++ S+ Q+++C     GCDG     + E   Q G L  E +Y
Sbjct: 143 FATLASIESQYAIKNNVHIDLSEQQMIDCDYVDMGCDGGLLHTAFEQMIQMGELVQEHEY 202

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG 887
           PY   N        +   VK+     ++ F   E +K +L   GP+ + +++  I +Y+ 
Sbjct: 203 PYAGVNKPCELRGDETGVVKVKGCYRYVVFR-EEKLKDLLRAVGPIPMAIDASGIVNYHH 261

Query: 888 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
             I      C  Y L HAVLLVGYG ++N+P+W  +N+WG    +EG+F++ +  +ACG+
Sbjct: 262 GIIH----YCENYGLNHAVLLVGYGVENNVPFWTFKNTWGKDWGEEGYFRVRQNVDACGM 317

Query: 948 -EQIAGYATID 957
             ++A  A ID
Sbjct: 318 TNELASSAVID 328



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 155/313 (49%), Gaps = 27/313 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 343
           F+ F+    + Y +  E + RF  F+Q   + + +        Y  ++F+D S  EI+ K
Sbjct: 31  FETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISK 90

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
            TG     +T            K ++  +  G  P  +DWR++N      +Q ACG+CWA
Sbjct: 91  YTGLNMPVQT--------TNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWA 142

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAG-LESEKD 461
           F+    +E QYAIK    ++ S+ Q+++C     GC G   L    E   Q G L  E +
Sbjct: 143 FATLASIESQYAIKNNVHIDLSEQQMIDCDYVDMGCDG-GLLHTAFEQMIQMGELVQEHE 201

Query: 462 YPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN-SHLIHFY 520
           YPY   N        +   VK+     ++ F   E +K +L   GP+ + ++ S +++++
Sbjct: 202 YPYAGVNKPCELRGDETGVVKVKGCYRYVVFR-EEKLKDLLRAVGPIPMAIDASGIVNYH 260

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
           +G         C  Y L HAVLLVGYG ++++P+W  +N+WG    +EG+F++ +  +AC
Sbjct: 261 HGII-----HYCENYGLNHAVLLVGYGVENNVPFWTFKNTWGKDWGEEGYFRVRQNVDAC 315

Query: 581 GI-EQIAGYATID 592
           G+  ++A  A ID
Sbjct: 316 GMTNELASSAVID 328



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 117/220 (53%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR++N      +Q  CG+CWAF+    +E QYAIK    ++ S+ Q+++C  
Sbjct: 114 GKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY 173

Query: 69  QCSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              GCDG     + E   Q G L  E +YPY   N        +   VK+     ++ F 
Sbjct: 174 VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFR 233

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E +K +L   GP+ + +++  I +Y+   I      C  Y L HAVLLVGYG ++N+P
Sbjct: 234 -EEKLKDLLRAVGPIPMAIDASGIVNYHHGIIH----YCENYGLNHAVLLVGYGVENNVP 288

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYATID 226
           +W  +N+WG    +EG+F++ +  +ACG+  ++A  A ID
Sbjct: 289 FWTFKNTWGKDWGEEGYFRVRQNVDACGMTNELASSAVID 328



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYAT 1023
            C  Y L HAVLLVGYG ++++P+W  +N+WG    +EG+F++ +  +ACG+  ++A  A 
Sbjct: 267  CENYGLNHAVLLVGYGVENNVPFWTFKNTWGKDWGEEGYFRVRQNVDACGMTNELASSAV 326

Query: 1024 ID 1025
            ID
Sbjct: 327  ID 328


>gi|356545108|ref|XP_003540987.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 365

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 155/323 (47%), Gaps = 49/323 (15%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           F  F  + G+ Y +++E   R++ FK +  +  +H+       +G + FSD +P E   K
Sbjct: 50  FLEFKRRFGKAYDSEDEHDYRYKVFKANMRRARRHQSLDPSAAHGVTRFSDLTPSEFRNK 109

Query: 710 T-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
             G +       R+  D  K   +  +      +P  +DWR      P  +Q +CGSCW+
Sbjct: 110 VLGLRGV-----RLPLDANKAPILPTD-----NLPSDFDWRDHGAVTPVKNQGSCGSCWS 159

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA 819
           FS  G LEG + + TG+LV  S+ QLV+C  +C         SGC+G     + EY  ++
Sbjct: 160 FSTTGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYILKS 219

Query: 820 -GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
            G+  E+DYPY  A  +   C +DK+K+        +     + +   L K GPL+V +N
Sbjct: 220 GGVMREEDYPYSGA--DSGTCKFDKTKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 277

Query: 879 SDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWG 927
           +  +  Y G           PY     L H VLLVGYG       +    P+W+++NSWG
Sbjct: 278 AAYMQTYIGG-------VSCPYVCSRRLNHGVLLVGYGSGAYAPIRMKEKPFWIIKNSWG 330

Query: 928 PIGPDEGFFKIERGNNACGIEQI 950
               + G++KI RG N CG++ +
Sbjct: 331 ENWGENGYYKICRGRNICGVDSM 353



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 159/335 (47%), Gaps = 49/335 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           F  F  + G+ Y +++E   R++ FK +  +  +H+       +G + FSD +P E   K
Sbjct: 50  FLEFKRRFGKAYDSEDEHDYRYKVFKANMRRARRHQSLDPSAAHGVTRFSDLTPSEFRNK 109

Query: 344 T-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
             G +       R+  D  K   +  +      +P  +DWR      P  +Q +CGSCW+
Sbjct: 110 VLGLRGV-----RLPLDANKAPILPTD-----NLPSDFDWRDHGAVTPVKNQGSCGSCWS 159

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------SGCGGCDG--LEQPIEYTHQA 454
           FS  G LEG + + TG+LV  S+ QLV+C  +C      S   GC+G  +    EY  ++
Sbjct: 160 FSTTGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYILKS 219

Query: 455 -GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
            G+  E+DYPY     +   C +DK+K+        +     + +   L K GPL+V +N
Sbjct: 220 GGVMREEDYPY--SGADSGTCKFDKTKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 277

Query: 514 SHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWG 562
           +  +  Y G           PY     L H VLLVGYG       +  + P+W+ +NSWG
Sbjct: 278 AAYMQTYIGG-------VSCPYVCSRRLNHGVLLVGYGSGAYAPIRMKEKPFWIIKNSWG 330

Query: 563 PIGPDEGFFKIERGNNACGIEQ-IAGYATIDVVIQ 596
               + G++KI RG N CG++  ++  A++    Q
Sbjct: 331 ENWGENGYYKICRGRNICGVDSMVSTVASVHTTTQ 365



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 121/242 (50%), Gaps = 31/242 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR      P  +Q  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 133 LPSDFDWRDHGAVTPVKNQGSCGSCWSFSTTGALEGAHFLSTGELVSLSEQQLVDCDHEC 192

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  ++ G+  E+DYPY  A  +   C +DK+K+     
Sbjct: 193 DPEEPGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPYSGA--DSGTCKFDKTKIAASVA 250

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NFSVVSLDEDQIAANLVKNGPLAVAINAAYMQTYIGG-------VSCPYVCSRRLNHGVL 303

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDVV 228
           LVGYG       +    P+W+++NSWG    + G++KI RG N CG++  ++  A++   
Sbjct: 304 LVGYGSGAYAPIRMKEKPFWIIKNSWGENWGENGYYKICRGRNICGVDSMVSTVASVHTT 363

Query: 229 IQ 230
            Q
Sbjct: 364 TQ 365



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 970  LGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            L H VLLVGYG       +  + P+W+++NSWG    + G++KI RG N CG++ +
Sbjct: 298  LNHGVLLVGYGSGAYAPIRMKEKPFWIIKNSWGENWGENGYYKICRGRNICGVDSM 353


>gi|225431287|ref|XP_002275759.1| PREDICTED: cysteine proteinase RD19a isoform 1 [Vitis vinifera]
 gi|297735094|emb|CBI17456.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 151/322 (46%), Gaps = 47/322 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 709
           F  F  K G+ Y+  EE   RF  F+ +  +            +G + FSD +P+E    
Sbjct: 52  FGLFKAKFGKTYSTVEEHDYRFSVFEANLRRARRHQLLDPSAVHGVTRFSDLTPDEF--- 108

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                  R Y  +   R   +     +     +P  +DWR      P  DQ +CGSCW+F
Sbjct: 109 ------RRDYLGLKPLRLPADAQKAPILPTNDLPTDFDWRDHGAVTPVKDQGSCGSCWSF 162

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA- 819
           S  G LEG + + TG L+  S+ QLV+C  +C          GC+G     + EY  +A 
Sbjct: 163 SAIGALEGAHFLTTGNLISMSEQQLVDCDHECDPEEYGACDQGCNGGLMTSAFEYILKAG 222

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           G+E E+ YPY  +  ++  C ++KS++        +     + +   + K GPL+V +N+
Sbjct: 223 GVEREETYPYIGS--DRGSCKFNKSQIVASVSNFSVVSLDEDQIAANMVKNGPLAVGINA 280

Query: 880 DLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGP 928
             +  Y          +C PY    +L H V+LVGYG            PYW+++NSWG 
Sbjct: 281 VFMQTY------MKGVSC-PYICSRNLDHGVVLVGYGSAGYAPIRFKEKPYWIIKNSWGE 333

Query: 929 IGPDEGFFKIERGNNACGIEQI 950
              ++G++KI RG+NACG++ +
Sbjct: 334 SWGEDGYYKICRGHNACGVDSM 355



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 156/334 (46%), Gaps = 47/334 (14%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 343
           F  F  K G+ Y+  EE   RF  F+ +  +            +G + FSD +P+E    
Sbjct: 52  FGLFKAKFGKTYSTVEEHDYRFSVFEANLRRARRHQLLDPSAVHGVTRFSDLTPDEF--- 108

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                  R Y  +   R   +     +     +P  +DWR      P  DQ +CGSCW+F
Sbjct: 109 ------RRDYLGLKPLRLPADAQKAPILPTNDLPTDFDWRDHGAVTPVKDQGSCGSCWSF 162

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGCG-GCDG--LEQPIEYTHQA- 454
           S  G LEG + + TG L+  S+ QLV+C  +C       C  GC+G  +    EY  +A 
Sbjct: 163 SAIGALEGAHFLTTGNLISMSEQQLVDCDHECDPEEYGACDQGCNGGLMTSAFEYILKAG 222

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           G+E E+ YPY     ++  C ++KS++        +     + +   + K GPL+VG+N+
Sbjct: 223 GVEREETYPYI--GSDRGSCKFNKSQIVASVSNFSVVSLDEDQIAANMVKNGPLAVGINA 280

Query: 515 HLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DDIPYWLARNSWGP 563
             +  Y          +C PY    +L H V+LVGYG          + PYW+ +NSWG 
Sbjct: 281 VFMQTY------MKGVSC-PYICSRNLDHGVVLVGYGSAGYAPIRFKEKPYWIIKNSWGE 333

Query: 564 IGPDEGFFKIERGNNACGIE-QIAGYATIDVVIQ 596
              ++G++KI RG+NACG++  ++  A I    Q
Sbjct: 334 SWGEDGYYKICRGHNACGVDSMVSTVAAIQTTTQ 367



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 123/242 (50%), Gaps = 31/242 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR      P  DQ  CGSCW+FS  G LEG + + TG L+  S+ QLV+C  +C
Sbjct: 135 LPTDFDWRDHGAVTPVKDQGSCGSCWSFSAIGALEGAHFLTTGNLISMSEQQLVDCDHEC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                     GC+G     + EY  +A G+E E+ YPY  +  ++  C ++KS++     
Sbjct: 195 DPEEYGACDQGCNGGLMTSAFEYILKAGGVEREETYPYIGS--DRGSCKFNKSQIVASVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   + K GPL+V +N+  +  Y          +C PY    +L H V+
Sbjct: 253 NFSVVSLDEDQIAANMVKNGPLAVGINAVFMQTY------MKGVSC-PYICSRNLDHGVV 305

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATIDVV 228
           LVGYG            PYW+++NSWG    ++G++KI RG+NACG++  ++  A I   
Sbjct: 306 LVGYGSAGYAPIRFKEKPYWIIKNSWGESWGEDGYYKICRGHNACGVDSMVSTVAAIQTT 365

Query: 229 IQ 230
            Q
Sbjct: 366 TQ 367



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLV 990
            ++ G  A GI  +     +  V     CS  +L H V+LVGYG          + PYW++
Sbjct: 269  VKNGPLAVGINAVFMQTYMKGVSCPYICS-RNLDHGVVLVGYGSAGYAPIRFKEKPYWII 327

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    ++G++KI RG+NACG++ +
Sbjct: 328  KNSWGESWGEDGYYKICRGHNACGVDSM 355


>gi|2414683|emb|CAB16316.1| cysteine proteinase precursor [Vicia sativa]
          Length = 379

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 174/378 (46%), Gaps = 57/378 (15%)

Query: 617 VASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAFIVKRGRQYANDE 673
           VA  LC  +L+  +  + + +     +   L   + ++L T   FK F+    ++Y+  E
Sbjct: 15  VAIFLCALTLSSSLHHETLIQ----DVARKLELKDNDLLTTEKKFKLFMKDYSKKYSTTE 70

Query: 674 EIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEI-LCKTGFK--WSERTYERI 722
           E   R   F ++  K  E         +G ++FSD S EE     TGFK  +        
Sbjct: 71  EYLLRLGIFAKNMVKAAEHQALDPTAIHGVTQFSDLSEEEFERFYTGFKGGFPSSNAAGG 130

Query: 723 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 782
           VA    V+            P+ +DWR+K        Q  CGSCWAF+  G +EG   + 
Sbjct: 131 VAPPLDVKGF----------PENFDWREKGAVTGIKTQGKCGSCWAFTTTGSIEGANFLA 180

Query: 783 TGKLVEFSKSQLVECAKQC--------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNAN 833
           TGKLV  S+ QLV+C  +C        +GC+G     + +Y  +A GLE E  YPY  A 
Sbjct: 181 TGKLVSLSEQQLVDCDNKCDITKTSCDNGCNGGLMTTAYDYLMEAGGLEEETSYPYTGAQ 240

Query: 834 GEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TP 889
           GE   C +D +KV +    +F +    E  +   L  +GPL++ +N+  +  Y G    P
Sbjct: 241 GE---CKFDPNKVAVRV-SNFTNIPADENQIAAYLVNHGPLAIAVNAVFMQTYVGGVSCP 296

Query: 890 IRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGN 942
           +      CS   L H VLLVGY  +          PYW ++NSWG    ++G++K+ RG+
Sbjct: 297 L-----ICSKRRLNHGVLLVGYNAEGFSILRLRKKPYWTIKNSWGEQWGEKGYYKLCRGH 351

Query: 943 NACGIEQIAGYATIDVVK 960
             CG+  +   A +  ++
Sbjct: 352 GMCGMNTMVSAAMVTQIQ 369



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 171/377 (45%), Gaps = 56/377 (14%)

Query: 251 VASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAFIVKRGRQYANDE 307
           VA  LC  +L+  +  + + +     +   L   + ++L T   FK F+    ++Y+  E
Sbjct: 15  VAIFLCALTLSSSLHHETLIQ----DVARKLELKDNDLLTTEKKFKLFMKDYSKKYSTTE 70

Query: 308 EIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEI-LCKTGFK--WSERTYERI 356
           E   R   F ++  K  E         +G ++FSD S EE     TGFK  +        
Sbjct: 71  EYLLRLGIFAKNMVKAAEHQALDPTAIHGVTQFSDLSEEEFERFYTGFKGGFPSSNAAGG 130

Query: 357 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 416
           VA    V+            P+ +DWR+K        Q  CGSCWAF+  G +EG   + 
Sbjct: 131 VAPPLDVKGF----------PENFDWREKGAVTGIKTQGKCGSCWAFTTTGSIEGANFLA 180

Query: 417 TGKLVEFSKSQLVECAKQC----SGC-GGCDG--LEQPIEYTHQA-GLESEKDYPYRNGN 468
           TGKLV  S+ QLV+C  +C    + C  GC+G  +    +Y  +A GLE E  YPY    
Sbjct: 181 TGKLVSLSEQQLVDCDNKCDITKTSCDNGCNGGLMTTAYDYLMEAGGLEEETSYPYTGAQ 240

Query: 469 GEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNG---TP 524
           GE   C +D +KV +    +F      E  +   L  +GPL++ +N+  +  Y G    P
Sbjct: 241 GE---CKFDPNKVAVRV-SNFTNIPADENQIAAYLVNHGPLAIAVNAVFMQTYVGGVSCP 296

Query: 525 IRKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERGN 577
           +      CS   L H VLLVGY  +          PYW  +NSWG    ++G++K+ RG+
Sbjct: 297 L-----ICSKRRLNHGVLLVGYNAEGFSILRLRKKPYWTIKNSWGEQWGEKGYYKLCRGH 351

Query: 578 NACGIEQIAGYATIDVV 594
             CG+  +   A +  +
Sbjct: 352 GMCGMNTMVSAAMVTQI 368



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 120/237 (50%), Gaps = 29/237 (12%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC- 70
           P+ +DWR+K        Q  CGSCWAF+  G +EG   + TGKLV  S+ QLV+C  +C 
Sbjct: 141 PENFDWREKGAVTGIKTQGKCGSCWAFTTTGSIEGANFLATGKLVSLSEQQLVDCDNKCD 200

Query: 71  -------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
                  +GC+G     + +Y  +A GLE E  YPY  A GE   C +D +KV +    +
Sbjct: 201 ITKTSCDNGCNGGLMTTAYDYLMEAGGLEEETSYPYTGAQGE---CKFDPNKVAVRV-SN 256

Query: 123 FLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLV 178
           F +    E  +   L  +GPL++ +N+  +  Y G    P+      CS   L H VLLV
Sbjct: 257 FTNIPADENQIAAYLVNHGPLAIAVNAVFMQTYVGGVSCPL-----ICSKRRLNHGVLLV 311

Query: 179 GYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVV 228
           GY  +          PYW ++NSWG    ++G++K+ RG+  CG+  +   A +  +
Sbjct: 312 GYNAEGFSILRLRKKPYWTIKNSWGEQWGEKGYYKLCRGHGMCGMNTMVSAAMVTQI 368


>gi|5679322|gb|AAD46920.1|AF167986_1 putative cysteine proteinase GmPM33 [Glycine max]
          Length = 363

 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 171/375 (45%), Gaps = 59/375 (15%)

Query: 609 QAVFLLCGVASCLCLPSLT---DRITDQVVARVDTLAIEGSLTFDNENILET---FKAFI 662
            A+  L  V+  LC  +L+      T Q +AR   L        DNE +L T   FK F+
Sbjct: 7   HALMCLARVSLFLCALTLSAAHGSTTVQDIARKLKLG-------DNE-LLRTEKKFKVFM 58

Query: 663 VKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 722
              GR Y+ +EE   R   F Q+  +       +E     P  +   T F         +
Sbjct: 59  ENYGRSYSTEEEYLRRLGIFAQNMVR------AAEHQALDPTAVHGVTQFS--------L 104

Query: 723 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 782
                    +   +E DG +P+ +DWR+K        Q  CGSCWAFS  G +EG   + 
Sbjct: 105 PVSNNAAGGIAPPLEVDG-LPENFDWREKGAVTEVKLQGRCGSCWAFSTTGSIEGANFLA 163

Query: 783 TGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNA 832
           TGKLV  S  QL++C  +C         +GC+G     +  Y  ++ GLE E  YPY   
Sbjct: 164 TGKLVSLSDQQLLDCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPY--- 220

Query: 833 NGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---T 888
            GE+ +C +D  K+ +    +F +    E  +   L K GPL++ +N+  +  Y G    
Sbjct: 221 TGERGECKFDPEKIAVKI-TNFTNIPADENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSC 279

Query: 889 PIRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           P+      CS   L H VLLVGYG       +  N PYW+++NSWG    ++G++K+ RG
Sbjct: 280 PL-----ICSKKRLNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGEKWGEDGYYKLCRG 334

Query: 942 NNACGIEQIAGYATI 956
           +  CGI  +   A +
Sbjct: 335 HGMCGINTMVSAAMV 349



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 169/375 (45%), Gaps = 58/375 (15%)

Query: 243 QAVFLLCGVASCLCLPSLT---DRITDQVVARVDTLAIEGSLTFDNENILET---FKAFI 296
            A+  L  V+  LC  +L+      T Q +AR   L        DNE +L T   FK F+
Sbjct: 7   HALMCLARVSLFLCALTLSAAHGSTTVQDIARKLKLG-------DNE-LLRTEKKFKVFM 58

Query: 297 VKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 356
              GR Y+ +EE   R   F Q+  +       +E     P  +   T F         +
Sbjct: 59  ENYGRSYSTEEEYLRRLGIFAQNMVR------AAEHQALDPTAVHGVTQFS--------L 104

Query: 357 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 416
                    +   +E DG +P+ +DWR+K        Q  CGSCWAFS  G +EG   + 
Sbjct: 105 PVSNNAAGGIAPPLEVDG-LPENFDWREKGAVTEVKLQGRCGSCWAFSTTGSIEGANFLA 163

Query: 417 TGKLVEFSKSQLVECAKQC-----SGC-GGCDGLEQPIEYTH---QAGLESEKDYPYRNG 467
           TGKLV  S  QL++C  +C     + C  GC+G      Y +     GLE E  YPY   
Sbjct: 164 TGKLVSLSDQQLLDCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPY--- 220

Query: 468 NGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNG---T 523
            GE+ +C +D  K+ +    +F      E  +   L K GPL++G+N+  +  Y G    
Sbjct: 221 TGERGECKFDPEKIAVKI-TNFTNIPADENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSC 279

Query: 524 PIRKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIERG 576
           P+      CS   L H VLLVGYG       +  + PYW+ +NSWG    ++G++K+ RG
Sbjct: 280 PL-----ICSKKRLNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGEKWGEDGYYKLCRG 334

Query: 577 NNACGIEQIAGYATI 591
           +  CGI  +   A +
Sbjct: 335 HGMCGINTMVSAAMV 349



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 125/242 (51%), Gaps = 31/242 (12%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           +E DG +P+ +DWR+K        Q  CGSCWAFS  G +EG   + TGKLV  S  QL+
Sbjct: 118 LEVDG-LPENFDWREKGAVTEVKLQGRCGSCWAFSTTGSIEGANFLATGKLVSLSDQQLL 176

Query: 65  ECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK 114
           +C  +C         +GC+G     +  Y  ++ GLE E  YPY    GE+ +C +D  K
Sbjct: 177 DCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPY---TGERGECKFDPEK 233

Query: 115 VKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYD 170
           + +    +F +    E  +   L K GPL++ +N+  +  Y G    P+      CS   
Sbjct: 234 IAVKI-TNFTNIPADENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSCPL-----ICSKKR 287

Query: 171 LGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 223
           L H VLLVGYG       +  N PYW+++NSWG    ++G++K+ RG+  CGI  +   A
Sbjct: 288 LNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGEKWGEDGYYKLCRGHGMCGINTMVSAA 347

Query: 224 TI 225
            +
Sbjct: 348 MV 349


>gi|357619727|gb|EHJ72186.1| cathepsin [Danaus plexippus]
          Length = 336

 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 171/347 (49%), Gaps = 33/347 (9%)

Query: 611 VFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYA 670
           VF+LC +       S T       V+ V+ +      + D   IL  F+ FI +  ++Y 
Sbjct: 3   VFVLCAI-------SFTAAAPQNDVSDVEKVRKPVFYSMDEAPIL--FENFIREYNKKY- 52

Query: 671 NDEEIKERFEYFKQD-------GHKK-HERYGTSEFSDRSPEEIL-CKTGFKWSERTYER 721
           + +E +ERF+ F  +        HK  +  +G ++F+D S EE     TGFK  +   + 
Sbjct: 53  DSKEKEERFKIFVNNLKRINDLNHKSTNAVHGINKFTDLSKEEFKKFYTGFKPDKSFLDD 112

Query: 722 IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAI 781
            +       K   ++  +   P A+DWR K V     +Q  CGSCWAFS  G +E   AI
Sbjct: 113 NI-------KKPSQLSFNITAPPAFDWRDKGVVTRVKNQGTCGSCWAFSTIGNVESVNAI 165

Query: 782 KTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAY 841
           K G LVE S+ QLV+C  +   CD    + + +Y    G  SE+ YPYK   G    C Y
Sbjct: 166 KHGNLVELSEQQLVDCDSKDEACDSGLPDNAQQYLVSHGAISEQSYPYK---GYAANCTY 222

Query: 842 DKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY 900
           D S+V +    +F     SE  M + LY   PLS+++ ++++  Y    +   +E     
Sbjct: 223 DSSQV-VVRLSNFEKVVLSECQMAEKLYSTAPLSIVIAAEVLGTYTKGILV--NECEQSQ 279

Query: 901 DLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           DL HAVLLVGYG +    +W+++NSWG    + G+F+I+RG N   I
Sbjct: 280 DLNHAVLLVGYGNEGGTNFWILKNSWGTNWGEGGYFRIKRGVNCLMI 326



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 168/350 (48%), Gaps = 38/350 (10%)

Query: 245 VFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYA 304
           VF+LC +       S T       V+ V+ +      + D   IL  F+ FI +  ++Y 
Sbjct: 3   VFVLCAI-------SFTAAAPQNDVSDVEKVRKPVFYSMDEAPIL--FENFIREYNKKY- 52

Query: 305 NDEEIKERFEYFKQD-------GHKK-HERYGTSEFSDRSPEEIL-CKTGFKWSERTYER 355
           + +E +ERF+ F  +        HK  +  +G ++F+D S EE     TGFK  +   + 
Sbjct: 53  DSKEKEERFKIFVNNLKRINDLNHKSTNAVHGINKFTDLSKEEFKKFYTGFKPDKSFLDD 112

Query: 356 IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAI 415
            +       K   ++  +   P A+DWR K V     +Q  CGSCWAFS  G +E   AI
Sbjct: 113 NI-------KKPSQLSFNITAPPAFDWRDKGVVTRVKNQGTCGSCWAFSTIGNVESVNAI 165

Query: 416 KTGKLVEFSKSQLVECAKQCSGC--GGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFK 473
           K G LVE S+ QLV+C  +   C  G  D  +Q   Y    G  SE+ YPY+   G    
Sbjct: 166 KHGNLVELSEQQLVDCDSKDEACDSGLPDNAQQ---YLVSHGAISEQSYPYK---GYAAN 219

Query: 474 CAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETC 532
           C YD S+V +    +F     SE  M + LY   PLS+ + + ++  Y    +   +E  
Sbjct: 220 CTYDSSQV-VVRLSNFEKVVLSECQMAEKLYSTAPLSIVIAAEVLGTYTKGILV--NECE 276

Query: 533 SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
              DL HAVLLVGYG +    +W+ +NSWG    + G+F+I+RG N   I
Sbjct: 277 QSQDLNHAVLLVGYGNEGGTNFWILKNSWGTNWGEGGYFRIKRGVNCLMI 326



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 112/206 (54%), Gaps = 7/206 (3%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P A+DWR K V     +Q  CGSCWAFS  G +E   AIK G LVE S+ QLV+C  +  
Sbjct: 127 PPAFDWRDKGVVTRVKNQGTCGSCWAFSTIGNVESVNAIKHGNLVELSEQQLVDCDSKDE 186

Query: 72  GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE- 130
            CD    + + +Y    G  SE+ YPYK   G    C YD S+V +    +F     SE 
Sbjct: 187 ACDSGLPDNAQQYLVSHGAISEQSYPYK---GYAANCTYDSSQV-VVRLSNFEKVVLSEC 242

Query: 131 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 190
            M + LY   PLS+++ ++++  Y    +   +E     DL HAVLLVGYG +    +W+
Sbjct: 243 QMAEKLYSTAPLSIVIAAEVLGTYTKGILV--NECEQSQDLNHAVLLVGYGNEGGTNFWI 300

Query: 191 VRNSWGPIGPDEGFFKIERGNNACGI 216
           ++NSWG    + G+F+I+RG N   I
Sbjct: 301 LKNSWGTNWGEGGYFRIKRGVNCLMI 326



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 32/47 (68%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            DL HAVLLVGYG +    +W+++NSWG    + G+F+I+RG N   I
Sbjct: 280  DLNHAVLLVGYGNEGGTNFWILKNSWGTNWGEGGYFRIKRGVNCLMI 326


>gi|194741252|ref|XP_001953103.1| GF17600 [Drosophila ananassae]
 gi|190626162|gb|EDV41686.1| GF17600 [Drosophila ananassae]
          Length = 333

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 171/351 (48%), Gaps = 43/351 (12%)

Query: 630 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 689
           I + ++  +  LAI  ++ +  + + E + AF ++  + Y ++ E + RF+ F       
Sbjct: 2   IKNCLILFMLLLAIAHAVPYAQDILEEEWMAFKLEYNKVYQDETEEQLRFKIFN------ 55

Query: 690 HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG--------- 740
              Y     +  + +    K  F  +   +  ++ D E  + ML ++   G         
Sbjct: 56  ---YNKLLIARHNLKWAAGKVSFNLAVNKFADLL-DHEFQDLMLGKMSPSGSNFGSSTFL 111

Query: 741 -PV----PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 795
            PV    PDA DWRK     P  DQ +CGSCWAFS  G LEGQ+  KTG+L+  S+  L+
Sbjct: 112 PPVNLTLPDAVDWRKYGFVTPVKDQGSCGSCWAFSTTGSLEGQHFRKTGQLISLSEQNLI 171

Query: 796 ECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 854
           +C+   +GC     E +  Y     G+++E  YPY+ A  +   C + +  +   T   F
Sbjct: 172 DCSPGNNGCKNGAVEYAFRYIQSNKGIDTEISYPYEAAQNQ---CRFRRDTIGA-TSTGF 227

Query: 855 LHFNGSETMK--KILYKYGPLSVLLNSDL-----IHDYNGTPIRKNDETCSPYDLGHAVL 907
           +  N  + M+  + +   GP+SVL+NS L      HD  G     ND +C+P  L HAVL
Sbjct: 228 VKLNPGDEMELAQAVATVGPISVLINSSLDSFKFYHD--GV---YNDPSCNPNKLTHAVL 282

Query: 908 LVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
           +VGYG  D    +WLV+NSW     ++G+ KI+R  NN CGI   A Y  +
Sbjct: 283 VVGYGTDDRGGDFWLVKNSWSTHWGEQGYVKIKRNANNLCGIASNALYPLV 333



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 122/225 (54%), Gaps = 19/225 (8%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PDA DWRK     P  DQ  CGSCWAFS  G LEGQ+  KTG+L+  S+  L++C+   
Sbjct: 118 LPDAVDWRKYGFVTPVKDQGSCGSCWAFSTTGSLEGQHFRKTGQLISLSEQNLIDCSPGN 177

Query: 71  SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           +GC     E +  Y     G+++E  YPY+ A  +   C + +  +   T   F+  N  
Sbjct: 178 NGCKNGAVEYAFRYIQSNKGIDTEISYPYEAAQNQ---CRFRRDTIGA-TSTGFVKLNPG 233

Query: 130 ETMK--KILYKYGPLSVLLNSDL-----IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           + M+  + +   GP+SVL+NS L      HD  G     ND +C+P  L HAVL+VGYG 
Sbjct: 234 DEMELAQAVATVGPISVLINSSLDSFKFYHD--GV---YNDPSCNPNKLTHAVLVVGYGT 288

Query: 183 QDN-IPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
            D    +WLV+NSW     ++G+ KI+R  NN CGI   A Y  +
Sbjct: 289 DDRGGDFWLVKNSWSTHWGEQGYVKIKRNANNLCGIASNALYPLV 333



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 165/347 (47%), Gaps = 34/347 (9%)

Query: 264 ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 323
           I + ++  +  LAI  ++ +  + + E + AF ++  + Y ++ E + RF+ F       
Sbjct: 2   IKNCLILFMLLLAIAHAVPYAQDILEEEWMAFKLEYNKVYQDETEEQLRFKIFN------ 55

Query: 324 HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG--------- 374
              Y     +  + +    K  F  +   +  ++ D E  + ML ++   G         
Sbjct: 56  ---YNKLLIARHNLKWAAGKVSFNLAVNKFADLL-DHEFQDLMLGKMSPSGSNFGSSTFL 111

Query: 375 -PV----PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 429
            PV    PDA DWRK     P  DQ +CGSCWAFS  G LEGQ+  KTG+L+  S+  L+
Sbjct: 112 PPVNLTLPDAVDWRKYGFVTPVKDQGSCGSCWAFSTTGSLEGQHFRKTGQLISLSEQNLI 171

Query: 430 ECAKQCSGCGGCDGLEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKD 488
           +C+   +GC     +E    Y     G+++E  YPY     +   C + +  +   T   
Sbjct: 172 DCSPGNNGCKN-GAVEYAFRYIQSNKGIDTEISYPYEAAQNQ---CRFRRDTIGA-TSTG 226

Query: 489 FLYFNGSETMK--KILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGY 546
           F+  N  + M+  + +   GP+SV +NS L  F        ND +C+P  L HAVL+VGY
Sbjct: 227 FVKLNPGDEMELAQAVATVGPISVLINSSLDSFKFYHDGVYNDPSCNPNKLTHAVLVVGY 286

Query: 547 GKQDD-IPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           G  D    +WL +NSW     ++G+ KI+R  NN CGI   A Y  +
Sbjct: 287 GTDDRGGDFWLVKNSWSTHWGEQGYVKIKRNANNLCGIASNALYPLV 333



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 957  DVVKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIER-GNNACG 1014
            D V ND +C+P  L HAVL+VGYG  D    +WLV+NSW     ++G+ KI+R  NN CG
Sbjct: 264  DGVYNDPSCNPNKLTHAVLVVGYGTDDRGGDFWLVKNSWSTHWGEQGYVKIKRNANNLCG 323

Query: 1015 IEQIAGYATI 1024
            I   A Y  +
Sbjct: 324  IASNALYPLV 333


>gi|288804650|ref|YP_003429335.1| cathepsin [Pieris rapae granulovirus]
 gi|270161225|gb|ACZ63497.1| cathepsin [Pieris rapae granulovirus]
          Length = 339

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 159/314 (50%), Gaps = 20/314 (6%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSE 697
           ++T++ EN    F+ FI K  + YA D+E   ++E FK        ++   K+  +  + 
Sbjct: 24  TVTYNLENSDNIFEDFIKKYNKSYATDQERAIKYENFKNNLKMINDKNNGSKYAVFDINA 83

Query: 698 FSDRSPEEILCKT-GFKWSERTYERIVADREK-VEKMLMEVEKDGPVPDAWDWRKKNVTG 755
           FSD +  ++L +T GF+   +       D  K     +++ E    +P+++DWR K+   
Sbjct: 84  FSDLNKNDLLRRTTGFRMGLKKNSYYTPDVSKECNVQVIKSEPQIILPESFDWRDKHGVT 143

Query: 756 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE- 814
           P  +Q  CGSCWAFS    +E  Y IK  K ++ S+  L+ C    +GC G     ++E 
Sbjct: 144 PVKNQLECGSCWAFSAIANIESLYNIKHNKELDLSEQHLINCDSINNGCGGGLMHWALET 203

Query: 815 YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
              Q G+ SEKD PY    G    C   +  V + +G           ++++L   GP+S
Sbjct: 204 ILQQGGIVSEKDEPYY---GLDAVCKPKQFNVSI-SGCTRYVLKNENKLRELLIANGPIS 259

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           + ++   + DY         + C   + L HAVLLVGYG  +NIPYW+++NSWG    ++
Sbjct: 260 MAVDIIDVIDYKEGIT----DICENMNGLNHAVLLVGYGVHNNIPYWIMKNSWGEEWGEK 315

Query: 934 GFFKIERGNNACGI 947
           G+ +++R  N+CG+
Sbjct: 316 GYLRVQRNINSCGL 329



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 160/317 (50%), Gaps = 25/317 (7%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSE 331
           ++T++ EN    F+ FI K  + YA D+E   ++E FK        ++   K+  +  + 
Sbjct: 24  TVTYNLENSDNIFEDFIKKYNKSYATDQERAIKYENFKNNLKMINDKNNGSKYAVFDINA 83

Query: 332 FSDRSPEEILCKT-GFKWSERTYERIVADREK-VEKMLMEVEKDGPVPDAWDWRKKNVTG 389
           FSD +  ++L +T GF+   +       D  K     +++ E    +P+++DWR K+   
Sbjct: 84  FSDLNKNDLLRRTTGFRMGLKKNSYYTPDVSKECNVQVIKSEPQIILPESFDWRDKHGVT 143

Query: 390 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIE 449
           P  +Q  CGSCWAFS    +E  Y IK  K ++ S+  L+ C    +GCGG  GL     
Sbjct: 144 PVKNQLECGSCWAFSAIANIESLYNIKHNKELDLSEQHLINCDSINNGCGG--GLMHWAL 201

Query: 450 YT--HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGP 507
            T   Q G+ SEKD PY    G    C   +  V + +G           ++++L   GP
Sbjct: 202 ETILQQGGIVSEKDEPYY---GLDAVCKPKQFNVSI-SGCTRYVLKNENKLRELLIANGP 257

Query: 508 LSVGLN-SHLIHFYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           +S+ ++   +I +  G       + C   + L HAVLLVGYG  ++IPYW+ +NSWG   
Sbjct: 258 ISMAVDIIDVIDYKEGIT-----DICENMNGLNHAVLLVGYGVHNNIPYWIMKNSWGEEW 312

Query: 566 PDEGFFKIERGNNACGI 582
            ++G+ +++R  N+CG+
Sbjct: 313 GEKGYLRVQRNINSCGL 329



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 10/208 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+++DWR K+   P  +Q +CGSCWAFS    +E  Y IK  K ++ S+  L+ C    
Sbjct: 130 LPESFDWRDKHGVTPVKNQLECGSCWAFSAIANIESLYNIKHNKELDLSEQHLINCDSIN 189

Query: 71  SGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           +GC G     ++E    Q G+ SEKD PY    G    C   +  V + +G         
Sbjct: 190 NGCGGGLMHWALETILQQGGIVSEKDEPYY---GLDAVCKPKQFNVSI-SGCTRYVLKNE 245

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIPY 188
             ++++L   GP+S+ ++   + DY         + C   + L HAVLLVGYG  +NIPY
Sbjct: 246 NKLRELLIANGPISMAVDIIDVIDYKEGIT----DICENMNGLNHAVLLVGYGVHNNIPY 301

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGI 216
           W+++NSWG    ++G+ +++R  N+CG+
Sbjct: 302 WIMKNSWGEEWGEKGYLRVQRNINSCGL 329



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 36/46 (78%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            L HAVLLVGYG  ++IPYW+++NSWG    ++G+ +++R  N+CG+
Sbjct: 284  LNHAVLLVGYGVHNNIPYWIMKNSWGEEWGEKGYLRVQRNINSCGL 329


>gi|281350252|gb|EFB25836.1| hypothetical protein PANDA_012122 [Ailuropoda melanoleuca]
          Length = 294

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 147/301 (48%), Gaps = 35/301 (11%)

Query: 671 NDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCKTGFKWSERTYERI 722
           + EE + R   F     K + H       + G ++FSD S  EI  K  + WSE   +  
Sbjct: 6   SSEEYQHRLRTFVGNWRKINAHNAGNHTFKMGLNQFSDMSFAEI--KRKYLWSEP--QNC 61

Query: 723 VADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAI 781
            A +         +   GP P   DWRKK     P  +Q  CGSCW FS  G LE   AI
Sbjct: 62  SATKGNY------LRGTGPYPPFVDWRKKGKFVSPVKNQGGCGSCWTFSTTGALESAIAI 115

Query: 782 KTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFK 838
           KTGKL+  ++ QLV+CA+  +  GC G     + EY  +  G+  E  YPYK  +G+   
Sbjct: 116 KTGKLLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYIRYNRGIMGEDSYPYKGQDGD--- 172

Query: 839 CAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKND 894
           C +  SK   F  KD   +  N  + M + +  + P+S    +  D +    G     + 
Sbjct: 173 CKFQPSKAIAFV-KDVANITINDEQAMVEAVALFNPVSFAFEVTGDFMMYRKGV---YSS 228

Query: 895 ETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 952
            +C  +P  + HAVL VGYG+Q+ +PYW+V+NSWGP     G+F IERG N CG+   A 
Sbjct: 229 TSCHKTPDKVNHAVLAVGYGEQNGVPYWIVKNSWGPQWGMHGYFLIERGKNMCGLAACAS 288

Query: 953 Y 953
           Y
Sbjct: 289 Y 289



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 119/224 (53%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P   DWRKK     P  +Q  CGSCW FS  G LE   AIKTGKL+  ++ QLV+CA
Sbjct: 73  GPYPPFVDWRKKGKFVSPVKNQGGCGSCWTFSTTGALESAIAIKTGKLLSLAEQQLVDCA 132

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPYK  +G+   C +  SK   F  KD  
Sbjct: 133 QDFNNHGCQGGLPSQAFEYIRYNRGIMGEDSYPYKGQDGD---CKFQPSKAIAFV-KDVA 188

Query: 124 -LHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
            +  N  + M + +  + P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 189 NITINDEQAMVEAVALFNPVSFAFEVTGDFMMYRKGV---YSSTSCHKTPDKVNHAVLAV 245

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+Q+ +PYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 246 GYGEQNGVPYWIVKNSWGPQWGMHGYFLIERGKNMCGLAACASY 289



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 146/301 (48%), Gaps = 34/301 (11%)

Query: 305 NDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCKTGFKWSERTYERI 356
           + EE + R   F     K + H       + G ++FSD S  EI  K  + WSE   +  
Sbjct: 6   SSEEYQHRLRTFVGNWRKINAHNAGNHTFKMGLNQFSDMSFAEI--KRKYLWSEP--QNC 61

Query: 357 VADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAI 415
            A +         +   GP P   DWRKK     P  +Q  CGSCW FS  G LE   AI
Sbjct: 62  SATKGNY------LRGTGPYPPFVDWRKKGKFVSPVKNQGGCGSCWTFSTTGALESAIAI 115

Query: 416 KTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFK 473
           KTGKL+  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E  YPY+  +G+   
Sbjct: 116 KTGKLLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYIRYNRGIMGEDSYPYKGQDGD--- 172

Query: 474 CAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVG--LNSHLIHFYNGTPIRKND 529
           C +  SK   F  KD   +  N  + M + +  + P+S    +    + +  G     + 
Sbjct: 173 CKFQPSKAIAFV-KDVANITINDEQAMVEAVALFNPVSFAFEVTGDFMMYRKGV---YSS 228

Query: 530 ETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAG 587
            +C  +P  + HAVL VGYG+Q+ +PYW+ +NSWGP     G+F IERG N CG+   A 
Sbjct: 229 TSCHKTPDKVNHAVLAVGYGEQNGVPYWIVKNSWGPQWGMHGYFLIERGKNMCGLAACAS 288

Query: 588 Y 588
           Y
Sbjct: 289 Y 289



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+Q+ +PYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 234  TPDKVNHAVLAVGYGEQNGVPYWIVKNSWGPQWGMHGYFLIERGKNMCGLAACASY 289


>gi|33333714|gb|AAQ11975.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 323

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 162/329 (49%), Gaps = 48/329 (14%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 334
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE L         +    + +D    E      E D    DA DWRK+    P  +Q
Sbjct: 78  MTHEEFLDLLKL----QGVPALPSDAVYFE------ETDIEEKDAVDWRKEGAVTPVKNQ 127

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +  G  GC+G  + Q  ++  
Sbjct: 128 GHCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEYYGNEGCNGGLMGQAFDFVE 187

Query: 453 QAGLESEKDYPYR------NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYG 506
             G+++E+ YPY+        NGE        +KVK +     L  N  E  + +  K G
Sbjct: 188 DEGIQTEESYPYKAKRSICQMNGEYV------TKVKTY----HLLLNEQEIARAVSAK-G 236

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDDIPYWLARNSWG 562
           P++V +++  + FY+   +   DE C       DL H VL+VGYG ++ + YW+ +NSWG
Sbjct: 237 PVAVAIDASQLSFYDQGIV---DEKCKCSKKREDLNHGVLVVGYGSENGVDYWIVKNSWG 293

Query: 563 PIGPDEGFFKIERGNNACGIEQIAGYATI 591
               ++G+F++++   ACGI     Y  +
Sbjct: 294 ADWGEKGYFRLKKDVKACGIGNYNTYPVL 322



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 49/329 (14%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 700
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE L         +    + +D    E      E D    DA DWRK+    P  +Q
Sbjct: 78  MTHEEFLDLLKL----QGVPALPSDAVYFE------ETDIEEKDAVDWRKEGAVTPVKNQ 127

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---SGCDGCFFEPSIEYTH 817
             CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +     GC+G     + ++  
Sbjct: 128 GHCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEYYGNEGCNGGLMGQAFDFVE 187

Query: 818 QAGLESEKDYPYK------NANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG 871
             G+++E+ YPYK        NGE        +KVK +     L  N  E  + +  K G
Sbjct: 188 DEGIQTEESYPYKAKRSICQMNGEYV------TKVKTY----HLLLNEQEIARAVSAK-G 236

Query: 872 PLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927
           P++V +++  +  Y+   +   DE C       DL H VL+VGYG ++ + YW+V+NSWG
Sbjct: 237 PVAVAIDASQLSFYDQGIV---DEKCKCSKKREDLNHGVLVVGYGSENGVDYWIVKNSWG 293

Query: 928 PIGPDEGFFKIERGNNACGIEQIAGYATI 956
               ++G+F++++   ACGI     Y  +
Sbjct: 294 ADWGEKGYFRLKKDVKACGIGNYNTYPVL 322



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 121/233 (51%), Gaps = 27/233 (11%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           E D    DA DWRK+    P  +Q  CGSCWAFS  G +EGQ+  K G LV  S  +LV+
Sbjct: 104 ETDIEEKDAVDWRKEGAVTPVKNQGHCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVD 163

Query: 66  CAKQC---SGCDGCFFEPSIEYTHQAGLESEKDYPYK------NANGEKFKCAYDKSKVK 116
           CA +     GC+G     + ++    G+++E+ YPYK        NGE        +KVK
Sbjct: 164 CATEYYGNEGCNGGLMGQAFDFVEDEGIQTEESYPYKAKRSICQMNGEYV------TKVK 217

Query: 117 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLG 172
            +     L  N  E  + +  K GP++V +++  +  Y+   +   DE C       DL 
Sbjct: 218 TY----HLLLNEQEIARAVSAK-GPVAVAIDASQLSFYDQGIV---DEKCKCSKKREDLN 269

Query: 173 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           H VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI     Y  +
Sbjct: 270 HGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIGNYNTYPVL 322



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 37/56 (66%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            DL H VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI     Y  +
Sbjct: 267  DLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIGNYNTYPVL 322


>gi|473159|emb|CAA83538.1| cathepsin L [Schistosoma mansoni]
          Length = 317

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 168/333 (50%), Gaps = 33/333 (9%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK-----QDGHKKHE---- 691
           +AI   L+   ++I + +K   +K  + Y++  EI+ +  + +     Q  + +H+    
Sbjct: 1   VAIAQHLSLQYDDIWKQWK---LKYNKTYSDSNEIRRKAIFMRYVEKIQQHNLRHDLGLE 57

Query: 692 --RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWR 749
               G ++F D   EEI  KT    S+      + D +K E   +E+  D P+P  WDWR
Sbjct: 58  GYTMGLNQFCDMDWEEI--KT-IMLSKVFGNSPLWDDKKEE---LELSND-PLPSKWDWR 110

Query: 750 KKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGC 807
                 P  +Q  CGSCWAFS AG +EGQ   K  KL+  S+ QLV+C+ +    GC G 
Sbjct: 111 DHGAVTPVKNQGLCGSCWAFSAAGAVEGQLVKKHKKLISLSEQQLVDCSYKYGNDGCQGG 170

Query: 808 FFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKI 866
             + S  Y  +  +ESEKDY Y    G    C + KSK  +   K   L     E ++K 
Sbjct: 171 TMDQSFAYLEKYPIESEKDYKYI---GHDSSCHFRKSKGVVKVKKFVDLPARDEEKLQKA 227

Query: 867 LYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRN 924
           LY YGP+SV +++  DLI   +G    K    CS + L H VL VGYG+++   YWL++N
Sbjct: 228 LYHYGPISVAIDALDDLILYKSGIYESKQ---CSSFLLNHGVLAVGYGRENRKDYWLIKN 284

Query: 925 SWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           SWG      G+FK+ R  +N CGI   A +  +
Sbjct: 285 SWGTTWGMNGYFKLRRNKHNMCGIATNASFPLL 317



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 169/334 (50%), Gaps = 34/334 (10%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK-----QDGHKKHE---- 325
           +AI   L+   ++I + +K   +K  + Y++  EI+ +  + +     Q  + +H+    
Sbjct: 1   VAIAQHLSLQYDDIWKQWK---LKYNKTYSDSNEIRRKAIFMRYVEKIQQHNLRHDLGLE 57

Query: 326 --RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWR 383
               G ++F D   EEI  KT    S+      + D +K E   +E+  D P+P  WDWR
Sbjct: 58  GYTMGLNQFCDMDWEEI--KT-IMLSKVFGNSPLWDDKKEE---LELSND-PLPSKWDWR 110

Query: 384 KKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG 443
                 P  +Q  CGSCWAFS AG +EGQ   K  KL+  S+ QLV+C+ +  G  GC G
Sbjct: 111 DHGAVTPVKNQGLCGSCWAFSAAGAVEGQLVKKHKKLISLSEQQLVDCSYK-YGNDGCQG 169

Query: 444 --LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKK 500
             ++Q   Y  +  +ESEKDY Y    G    C + KSK  +   K   L     E ++K
Sbjct: 170 GTMDQSFAYLEKYPIESEKDYKYI---GHDSSCHFRKSKGVVKVKKFVDLPARDEEKLQK 226

Query: 501 ILYKYGPLSVGLNS--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLAR 558
            LY YGP+SV +++   LI + +G    K    CS + L H VL VGYG+++   YWL +
Sbjct: 227 ALYHYGPISVAIDALDDLILYKSGIYESKQ---CSSFLLNHGVLAVGYGRENRKDYWLIK 283

Query: 559 NSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           NSWG      G+FK+ R  +N CGI   A +  +
Sbjct: 284 NSWGTTWGMNGYFKLRRNKHNMCGIATNASFPLL 317



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 123/229 (53%), Gaps = 13/229 (5%)

Query: 3   MEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
           +E+  D P+P  WDWR      P  +Q  CGSCWAFS AG +EGQ   K  KL+  S+ Q
Sbjct: 96  LELSND-PLPSKWDWRDHGAVTPVKNQGLCGSCWAFSAAGAVEGQLVKKHKKLISLSEQQ 154

Query: 63  LVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           LV+C+ +    GC G   + S  Y  +  +ESEKDY Y    G    C + KSK  +   
Sbjct: 155 LVDCSYKYGNDGCQGGTMDQSFAYLEKYPIESEKDYKYI---GHDSSCHFRKSKGVVKVK 211

Query: 121 KDF-LHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
           K   L     E ++K LY YGP+SV +++  DLI   +G    K    CS + L H VL 
Sbjct: 212 KFVDLPARDEEKLQKALYHYGPISVAIDALDDLILYKSGIYESKQ---CSSFLLNHGVLA 268

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           VGYG+++   YWL++NSWG      G+FK+ R  +N CGI   A +  +
Sbjct: 269 VGYGRENRKDYWLIKNSWGTTWGMNGYFKLRRNKHNMCGIATNASFPLL 317



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 963  ETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 1021
            + CS + L H VL VGYG+++   YWL++NSWG      G+FK+ R  +N CGI   A +
Sbjct: 255  KQCSSFLLNHGVLAVGYGRENRKDYWLIKNSWGTTWGMNGYFKLRRNKHNMCGIATNASF 314

Query: 1022 ATI 1024
              +
Sbjct: 315  PLL 317


>gi|358334193|dbj|GAA43174.2| cysteine proteinase 3, partial [Clonorchis sinensis]
          Length = 374

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 157/331 (47%), Gaps = 41/331 (12%)

Query: 651 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEF 698
           N  +   ++ F V+  R+Y + +E   R   F Q   +  E            + G +EF
Sbjct: 60  NYTVHLAWEKFRVEFNRKYTDSQEQINRLNVFCQSFMRVREHNKAYEEGRVTFKRGINEF 119

Query: 699 SDRSPEEILCKTG-----FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           SDR P+E     G      K S  T+ ++ A                P P + DWR+   
Sbjct: 120 SDRFPDERQHACGGRINISKHSGSTFRKVAA----------------PAPQSIDWRRNGA 163

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCDGCFFEP 811
             P   Q  CG+CWAF+  G +EG+Y I   +L  FS  QLV+C +    +GC+G +   
Sbjct: 164 VTPVRRQGDCGACWAFAATGAIEGRYFIFEKRLETFSPQQLVDCIQGDTTNGCNGGYPSE 223

Query: 812 SIEYTHQA-GLESEKDYPYKN-ANGEKFK-CAYDKSKVKL-FTGKDFLHFNGSETMKKIL 867
           + EY     GLE E+DYPY + A G     C YD++K ++  T    L     E + + +
Sbjct: 224 AFEYVENVGGLELERDYPYVSVATGLPNPFCGYDQTKQQVKLTSHVILPSGDEEALLQAV 283

Query: 868 YKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNS 925
             YGP+++L ++      DY      + +   +  D+ HA+L+VGYG++   PYWLV+NS
Sbjct: 284 SIYGPIAILFDASHPSFKDYESDIYSEENCGTTLDDVTHAMLVVGYGEELGEPYWLVKNS 343

Query: 926 WGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           WG    ++G+ ++ RG N C +   + Y  +
Sbjct: 344 WGDKWGEKGYMRVRRGVNMCAVAGFSSYPLM 374



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 153/333 (45%), Gaps = 44/333 (13%)

Query: 285 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEF 332
           N  +   ++ F V+  R+Y + +E   R   F Q   +  E            + G +EF
Sbjct: 60  NYTVHLAWEKFRVEFNRKYTDSQEQINRLNVFCQSFMRVREHNKAYEEGRVTFKRGINEF 119

Query: 333 SDRSPEEILCKTG-----FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           SDR P+E     G      K S  T+ ++ A                P P + DWR+   
Sbjct: 120 SDRFPDERQHACGGRINISKHSGSTFRKVAA----------------PAPQSIDWRRNGA 163

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LE 445
             P   Q  CG+CWAF+  G +EG+Y I   +L  FS  QLV+C  Q     GC+G    
Sbjct: 164 VTPVRRQGDCGACWAFAATGAIEGRYFIFEKRLETFSPQQLVDCI-QGDTTNGCNGGYPS 222

Query: 446 QPIEYTHQA-GLESEKDYPY---RNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKK 500
           +  EY     GLE E+DYPY     G    F C YD++K ++  T    L     E + +
Sbjct: 223 EAFEYVENVGGLELERDYPYVSVATGLPNPF-CGYDQTKQQVKLTSHVILPSGDEEALLQ 281

Query: 501 ILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY--DLGHAVLLVGYGKQDDIPYWLAR 558
            +  YGP+++  ++    F +      ++E C     D+ HA+L+VGYG++   PYWL +
Sbjct: 282 AVSIYGPIAILFDASHPSFKDYESDIYSEENCGTTLDDVTHAMLVVGYGEELGEPYWLVK 341

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           NSWG    ++G+ ++ RG N C +   + Y  +
Sbjct: 342 NSWGDKWGEKGYMRVRRGVNMCAVAGFSSYPLM 374



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 8/225 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
            P P + DWR+     P   Q DCG+CWAF+  G +EG+Y I   +L  FS  QLV+C +
Sbjct: 150 APAPQSIDWRRNGAVTPVRRQGDCGACWAFAATGAIEGRYFIFEKRLETFSPQQLVDCIQ 209

Query: 69  --QCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKN-ANGEKFK-CAYDKSKVKL-FTGKD 122
               +GC+G +   + EY     GLE E+DYPY + A G     C YD++K ++  T   
Sbjct: 210 GDTTNGCNGGYPSEAFEYVENVGGLELERDYPYVSVATGLPNPFCGYDQTKQQVKLTSHV 269

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
            L     E + + +  YGP+++L ++      DY      + +   +  D+ HA+L+VGY
Sbjct: 270 ILPSGDEEALLQAVSIYGPIAILFDASHPSFKDYESDIYSEENCGTTLDDVTHAMLVVGY 329

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           G++   PYWLV+NSWG    ++G+ ++ RG N C +   + Y  +
Sbjct: 330 GEELGEPYWLVKNSWGDKWGEKGYMRVRRGVNMCAVAGFSSYPLM 374



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 37/56 (66%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            D+ HA+L+VGYG++   PYWLV+NSWG    ++G+ ++ RG N C +   + Y  +
Sbjct: 319  DVTHAMLVVGYGEELGEPYWLVKNSWGDKWGEKGYMRVRRGVNMCAVAGFSSYPLM 374


>gi|33242882|gb|AAQ01145.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 165/338 (48%), Gaps = 22/338 (6%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 327
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 381
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDSDDNGTLPKSVD 119

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCG 439
           WR  ++     DQ  CG CWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GCG
Sbjct: 120 WRNSHMVSEVKDQGECGPCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 440 GCDGLEQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSET 497
           G   ++Q  +Y     GL++E+ YPY   + +   C +D S V     G   +       
Sbjct: 180 G-GLMDQAFQYIPANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGYKDVKSGNEHA 236

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD---IPY 554
           +K+ +   GP+SV +++    F   +    ++  CS   L H VL VGYG  +D     +
Sbjct: 237 LKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAF 296

Query: 555 WLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           W+ +NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 297 WIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 163/337 (48%), Gaps = 21/337 (6%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 693
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 747
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDSDDNGTLPKSVD 119

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCD 805
           WR  ++     DQ  CG CWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GC 
Sbjct: 120 WRNSHMVSEVKDQGECGPCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 806 GCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETM 863
           G   + + +Y     GL++E+ YPY   + +   C +D S V     G   +       +
Sbjct: 180 GGLMDQAFQYIPANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGYKDVKSGNEHAL 237

Query: 864 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---IPYW 920
           K+ +   GP+SV +++        +    ++  CS   L H VL VGYG  ++     +W
Sbjct: 238 KRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFW 297

Query: 921 LVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 298 IVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 10/228 (4%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           + +G +P + DWR  ++     DQ +CG CWAFS  G LEGQ++ KTGKLV+ S+ QLV+
Sbjct: 109 DDNGTLPKSVDWRNSHMVSEVKDQGECGPCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVD 168

Query: 66  CAKQC--SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK 121
           C+K     GC G   + + +Y     GL++E+ YPY   + +   C +D S V     G 
Sbjct: 169 CSKDFGNQGCGGGLMDQAFQYIPANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGY 226

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
             +       +K+ +   GP+SV +++        +    ++  CS   L H VL VGYG
Sbjct: 227 KDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYG 286

Query: 182 KQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 287 AMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|344284284|ref|XP_003413898.1| PREDICTED: pro-cathepsin H-like [Loxodonta africana]
          Length = 335

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 152/311 (48%), Gaps = 30/311 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 709
           F++++ +  ++Y++ EE  +R + F     K + H       +   ++FSD +  EI  K
Sbjct: 35  FQSWMAQHQKKYSS-EEYHQRQQTFVSNWRKINAHNARNHTFKMALNQFSDMTFAEI--K 91

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +         +   GP P   DWRKK +   P  +Q ACGSCW 
Sbjct: 92  QKYLWSEP--QNCSATKGNY------LRGTGPYPPFVDWRKKGHFVSPVKNQGACGSCWT 143

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI  GKL+  ++ QLV+CAK  +  GC G     + EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIAGGKLLSLAEQQLVDCAKDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVLLN-SDLI 882
            YPYK   G+   C +   K   F  KD   +  N  E M + +  Y P+S     +D  
Sbjct: 204 TYPYK---GQDDVCKFQPKKAIAFV-KDVANITLNDEEAMVEAVALYNPVSFAFEVTDDF 259

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+           +P  + HAVL VGYG++  IPYW+V+NSWGP    +G+F IERG 
Sbjct: 260 MKYSKGIYSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPYWGMDGYFLIERGK 319

Query: 943 NACGIEQIAGY 953
           N CG+   A Y
Sbjct: 320 NMCGLAACASY 330



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 152/316 (48%), Gaps = 39/316 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 343
           F++++ +  ++Y++ EE  +R + F     K + H       +   ++FSD +  EI  K
Sbjct: 35  FQSWMAQHQKKYSS-EEYHQRQQTFVSNWRKINAHNARNHTFKMALNQFSDMTFAEI--K 91

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +         +   GP P   DWRKK +   P  +Q ACGSCW 
Sbjct: 92  QKYLWSEP--QNCSATKGNY------LRGTGPYPPFVDWRKKGHFVSPVKNQGACGSCWT 143

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI  GKL+  ++ QLV+CAK  +  G   GL  Q  EY  +  G+  E 
Sbjct: 144 FSTTGALESAIAIAGGKLLSLAEQQLVDCAKDFNNHGCQGGLPSQAFEYILYNKGIMGED 203

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLN----- 513
            YPY+   G+   C +   K   F  KD   +  N  E M + +  Y P+S         
Sbjct: 204 TYPYK---GQDDVCKFQPKKAIAFV-KDVANITLNDEEAMVEAVALYNPVSFAFEVTDDF 259

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
             +    Y+ T   K     +P  + HAVL VGYG++  IPYW+ +NSWGP    +G+F 
Sbjct: 260 MKYSKGIYSSTSCHK-----TPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPYWGMDGYFL 314

Query: 573 IERGNNACGIEQIAGY 588
           IERG N CG+   A Y
Sbjct: 315 IERGKNMCGLAACASY 330



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 113/221 (51%), Gaps = 11/221 (4%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P   DWRKK +   P  +Q  CGSCW FS  G LE   AI  GKL+  ++ QLV+CA
Sbjct: 114 GPYPPFVDWRKKGHFVSPVKNQGACGSCWTFSTTGALESAIAIAGGKLLSLAEQQLVDCA 173

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           K  +  GC G     + EY  +  G+  E  YPYK   G+   C +   K   F  KD  
Sbjct: 174 KDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYK---GQDDVCKFQPKKAIAFV-KDVA 229

Query: 124 -LHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
            +  N  E M + +  Y P+S     +D    Y+           +P  + HAVL VGYG
Sbjct: 230 NITLNDEEAMVEAVALYNPVSFAFEVTDDFMKYSKGIYSSTSCHKTPDKVNHAVLAVGYG 289

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           ++  IPYW+V+NSWGP    +G+F IERG N CG+   A Y
Sbjct: 290 EEKGIPYWIVKNSWGPYWGMDGYFLIERGKNMCGLAACASY 330



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG++  IPYW+V+NSWGP    +G+F IERG N CG+   A Y
Sbjct: 275  TPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPYWGMDGYFLIERGKNMCGLAACASY 330


>gi|310751866|gb|ADP09371.1| cathepsin L-like proteinase [Fasciola hepatica]
          Length = 326

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 117/217 (53%), Gaps = 12/217 (5%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
            VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C++ 
Sbjct: 107 AVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRP 166

Query: 70  C--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHF 126
              +GC G   E + EY  Q GLE+E  YPY+   G+   C Y+K   V   TG   +H 
Sbjct: 167 WGNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNKQLGVAKVTGYYTVHS 223

Query: 127 NGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
                +K ++   GP +V ++  SD +  Y+G   +   +TCSP  L HAVL VGYG Q 
Sbjct: 224 GSEVELKNLVGAEGPAAVAVDVESDFMM-YSGGIYQ--SQTCSPLGLNHAVLAVGYGTQG 280

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
              YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 281 GTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 116/217 (53%), Gaps = 12/217 (5%)

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
            VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C++ 
Sbjct: 107 AVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRP 166

Query: 801 C--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHF 857
              +GC G   E + EY  Q GLE+E  YPY+   G+   C Y+K   V   TG   +H 
Sbjct: 167 WGNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNKQLGVAKVTGYYTVHS 223

Query: 858 NGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 915
                +K ++   GP +V ++  SD +  Y+G   +   +TCSP  L HAVL VGYG Q 
Sbjct: 224 GSEVELKNLVGAEGPAAVAVDVESDFMM-YSGGIYQ--SQTCSPLGLNHAVLAVGYGTQG 280

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
              YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 281 GTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 115/219 (52%), Gaps = 15/219 (6%)

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
            VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C++ 
Sbjct: 107 AVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRP 166

Query: 435 CSGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLY 491
             G  GC G  +E   EY  Q GLE+E  YPYR   G+   C Y+K   V   TG  +  
Sbjct: 167 W-GNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNKQLGVAKVTGY-YTV 221

Query: 492 FNGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
            +GSE  +K ++   GP +V ++  S  + +  G       +TCSP  L HAVL VGYG 
Sbjct: 222 HSGSEVELKNLVGAEGPAAVAVDVESDFMMYSGGI---YQSQTCSPLGLNHAVLAVGYGT 278

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
           Q    YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 279 QGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 17/102 (16%)

Query: 934  GFFKIERGN-----NACGIEQIAGYATIDV----------VKNDETCSPYDLGHAVLLVG 978
            G++ +  G+     N  G E  A  A +DV          +   +TCSP  L HAVL VG
Sbjct: 217  GYYTVHSGSEVELKNLVGAEGPAAVA-VDVESDFMMYSGGIYQSQTCSPLGLNHAVLAVG 275

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 1019
            YG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 276  YGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317


>gi|166235890|ref|NP_031827.2| pro-cathepsin H preproprotein [Mus musculus]
 gi|341940309|sp|P49935.2|CATH_MOUSE RecName: Full=Pro-cathepsin H; AltName: Full=Cathepsin B3; AltName:
           Full=Cathepsin BA; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|74151776|dbj|BAE29677.1| unnamed protein product [Mus musculus]
 gi|74181999|dbj|BAE34071.1| unnamed protein product [Mus musculus]
 gi|74211659|dbj|BAE29188.1| unnamed protein product [Mus musculus]
 gi|74213518|dbj|BAE35569.1| unnamed protein product [Mus musculus]
 gi|148688954|gb|EDL20901.1| cathepsin H, isoform CRA_b [Mus musculus]
          Length = 333

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 153/316 (48%), Gaps = 30/316 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGT-----SEFSDRSPEEILCK 709
           FK+++ +  + Y+   E   R + F  +  K    ++R  T     ++FSD S  EI  K
Sbjct: 33  FKSWMKQHQKTYS-SVEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEI--K 89

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             F WSE   +   A +         +   GP P + DWRKK NV  P  +Q ACGSCW 
Sbjct: 90  HKFLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWT 141

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI +GK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 142 FSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEED 201

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVL--LNSDLI 882
            YPY    G+   C ++  K   F      +  N    M + +  Y P+S    +  D +
Sbjct: 202 SYPYI---GKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFL 258

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
              +G    K+    +P  + HAVL VGYG+Q+ + YW+V+NSWG    + G+F IERG 
Sbjct: 259 MYKSGVYSSKSCHK-TPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGK 317

Query: 943 NACGIEQIAGYATIDV 958
           N CG+   A Y    V
Sbjct: 318 NMCGLAACASYPIPQV 333



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 152/316 (48%), Gaps = 29/316 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGT-----SEFSDRSPEEILCK 343
           FK+++ +  + Y+   E   R + F  +  K    ++R  T     ++FSD S  EI  K
Sbjct: 33  FKSWMKQHQKTYS-SVEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEI--K 89

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             F WSE   +   A +         +   GP P + DWRKK NV  P  +Q ACGSCW 
Sbjct: 90  HKFLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWT 141

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI +GK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 142 FSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEED 201

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVG--LNSHLI 517
            YPY    G+   C ++  K   F      +  N    M + +  Y P+S    +    +
Sbjct: 202 SYPYI---GKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFL 258

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            + +G    K+    +P  + HAVL VGYG+Q+ + YW+ +NSWG    + G+F IERG 
Sbjct: 259 MYKSGVYSSKSCHK-TPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGK 317

Query: 578 NACGIEQIAGYATIDV 593
           N CG+   A Y    V
Sbjct: 318 NMCGLAACASYPIPQV 333



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 116/226 (51%), Gaps = 11/226 (4%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK NV  P  +Q  CGSCW FS  G LE   AI +GK++  ++ QLV+CA
Sbjct: 112 GPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMLSLAEQQLVDCA 171

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPY    G+   C ++  K   F      
Sbjct: 172 QAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYI---GKDSSCRFNPQKAVAFVKNVVN 228

Query: 124 LHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           +  N    M + +  Y P+S    +  D +   +G    K+    +P  + HAVL VGYG
Sbjct: 229 ITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHK-TPDKVNHAVLAVGYG 287

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           +Q+ + YW+V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 288 EQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAACASYPIPQV 333



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 2/70 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V + ++C  +P  + HAVL VGYG+Q+ + YW+V+NSWG    + G+F IERG N CG+ 
Sbjct: 264  VYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLA 323

Query: 1017 QIAGYATIDV 1026
              A Y    V
Sbjct: 324  ACASYPIPQV 333


>gi|149725427|ref|XP_001494683.1| PREDICTED: cathepsin W-like [Equus caballus]
          Length = 373

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 160/344 (46%), Gaps = 42/344 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           E F  F ++  R Y++  E   R + F ++  +             +G S FSD + EE 
Sbjct: 40  EVFTLFQIQYNRSYSSPAEYAHRLDIFARNLAQAQRLQEDDLGTAEFGVSPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGS 765
               G       + R  A    V + +   + +  VP   DW+K   V     +Q  C  
Sbjct: 100 GQLYG-------HRRAAAGAPHVGRKVESEKWEKTVPQTCDWQKAAGVISSVKNQEMCNC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  +AI   + VE S  QL++C +  +GC G F ++  +   + +GL SE
Sbjct: 153 CWAMAAAGNIEALWAITYHQSVEVSIQQLLDCDRCGNGCKGGFVWDAFLTVLNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIH 883
           KDYP++  + +  +C   K KV     +DF+     E  + + L  +GP++V +N  L+ 
Sbjct: 213 KDYPFR-GDAKPHRCQAKKPKVAWI--QDFIRLPEDEQKIAEYLATHGPITVTINMKLLQ 269

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI------------------PYWLVRNS 925
            Y    I+    TC P  L H+VLLVG+G   ++                   YW+++NS
Sbjct: 270 QYQKGVIKATPTTCDPQHLDHSVLLVGFGGGKSVEGRRPGAVSSQSRPRRSSSYWILKNS 329

Query: 926 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKNDE--TCSP 967
           WG    +EG+F++ RG+N CGI + A  A +D  +     +C P
Sbjct: 330 WGAKWGEEGYFRLHRGSNTCGITKYALTALVDQPRKKRPVSCPP 373



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 153/332 (46%), Gaps = 39/332 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           E F  F ++  R Y++  E   R + F ++  +             +G S FSD + EE 
Sbjct: 40  EVFTLFQIQYNRSYSSPAEYAHRLDIFARNLAQAQRLQEDDLGTAEFGVSPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGS 399
               G       + R  A    V + +   + +  VP   DW+K   V     +Q  C  
Sbjct: 100 GQLYG-------HRRAAAGAPHVGRKVESEKWEKTVPQTCDWQKAAGVISSVKNQEMCNC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  +AI   + VE S  QL++C +  +GC G    +  +   + +GL SE
Sbjct: 153 CWAMAAAGNIEALWAITYHQSVEVSIQQLLDCDRCGNGCKGGFVWDAFLTVLNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIH 518
           KDYP+R G+ +  +C   K KV     +DF+     E  + + L  +GP++V +N  L+ 
Sbjct: 213 KDYPFR-GDAKPHRCQAKKPKVAWI--QDFIRLPEDEQKIAEYLATHGPITVTINMKLLQ 269

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI------------------PYWLARNS 560
            Y    I+    TC P  L H+VLLVG+G    +                   YW+ +NS
Sbjct: 270 QYQKGVIKATPTTCDPQHLDHSVLLVGFGGGKSVEGRRPGAVSSQSRPRRSSSYWILKNS 329

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           WG    +EG+F++ RG+N CGI + A  A +D
Sbjct: 330 WGAKWGEEGYFRLHRGSNTCGITKYALTALVD 361



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 122/237 (51%), Gaps = 24/237 (10%)

Query: 11  VPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           VP   DW+K   V     +Q  C  CWA + AG +E  +AI   + VE S  QL++C + 
Sbjct: 128 VPQTCDWQKAAGVISSVKNQEMCNCCWAMAAAGNIEALWAITYHQSVEVSIQQLLDCDRC 187

Query: 70  CSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
            +GC G F ++  +   + +GL SEKDYP++  + +  +C   K KV     +DF+    
Sbjct: 188 GNGCKGGFVWDAFLTVLNNSGLASEKDYPFR-GDAKPHRCQAKKPKVAWI--QDFIRLPE 244

Query: 129 SET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI- 186
            E  + + L  +GP++V +N  L+  Y    I+    TC P  L H+VLLVG+G   ++ 
Sbjct: 245 DEQKIAEYLATHGPITVTINMKLLQQYQKGVIKATPTTCDPQHLDHSVLLVGFGGGKSVE 304

Query: 187 -----------------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
                             YW+++NSWG    +EG+F++ RG+N CGI + A  A +D
Sbjct: 305 GRRPGAVSSQSRPRRSSSYWILKNSWGAKWGEEGYFRLHRGSNTCGITKYALTALVD 361



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 18/80 (22%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDI------------------PYWLVRNSWGPIGPDEGFFK 1005
            TC P  L H+VLLVG+G    +                   YW+++NSWG    +EG+F+
Sbjct: 282  TCDPQHLDHSVLLVGFGGGKSVEGRRPGAVSSQSRPRRSSSYWILKNSWGAKWGEEGYFR 341

Query: 1006 IERGNNACGIEQIAGYATID 1025
            + RG+N CGI + A  A +D
Sbjct: 342  LHRGSNTCGITKYALTALVD 361


>gi|33242876|gb|AAQ01142.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 165/338 (48%), Gaps = 22/338 (6%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 327
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R    +++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFILEKNTVKIAEHN 59

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 381
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCG 439
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GCG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 440 GCDGLEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSET 497
           G   ++Q  +Y     GL++E+ YPY   + +   C +D S V     G   +       
Sbjct: 180 G-GLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGYKDVKSGNEHA 236

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD---IPY 554
           +K+ +   GP+SV +++    F   +    ++  CS   L H VL VGYG  +D     +
Sbjct: 237 LKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAF 296

Query: 555 WLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           W+ +NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 297 WIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 163/337 (48%), Gaps = 21/337 (6%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 693
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R    +++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFILEKNTVKIAEHN 59

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 747
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCD 805
           WR  ++     DQ  CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+C+K     GC 
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCG 179

Query: 806 GCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETM 863
           G   + + +Y     GL++E+ YPY   + +   C +D S V     G   +       +
Sbjct: 180 GGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGYKDVKSGNEHAL 237

Query: 864 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---IPYW 920
           K+ +   GP+SV +++        +    ++  CS   L H VL VGYG  ++     +W
Sbjct: 238 KRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFW 297

Query: 921 LVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 298 IVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 121/228 (53%), Gaps = 10/228 (4%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           + +G +P + DWR  ++     DQ +CGSCWAFS  G LEGQ++ KTGKLV+ S+ QLV+
Sbjct: 109 DDNGTLPKSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVD 168

Query: 66  CAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK 121
           C+K     GC G   + + +Y     GL++E+ YPY   + +   C +D S V     G 
Sbjct: 169 CSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKFDNSSVGATLVGY 226

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
             +       +K+ +   GP+SV +++        +    ++  CS   L H VL VGYG
Sbjct: 227 KDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLDHGVLAVGYG 286

Query: 182 KQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 287 AMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|356576257|ref|XP_003556249.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase 15A-like
           [Glycine max]
          Length = 374

 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 161/339 (47%), Gaps = 53/339 (15%)

Query: 650 DNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEF 698
           DNE +L T   FK F+   GR Y+  EE   R   F Q+  +  E         +G ++F
Sbjct: 44  DNE-LLRTEKKFKVFMENYGRSYSTREEYLRRLGIFSQNMLRAAEHQALDPTAVHGVTQF 102

Query: 699 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 758
           SD +  E          E+ Y            +   +E +G +P+ +DWR+K       
Sbjct: 103 SDLTEVEF---------EKLYTG-XPSTNTAGGVAPPLEVEG-LPENFDWREKGAVTEVK 151

Query: 759 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFF 809
            Q  CGSCWAFS  G +EG   + TGKLV  S+ QL++C  +C         +GC+G   
Sbjct: 152 IQGRCGSCWAFSTTGSIEGANFLATGKLVSLSEQQLLDCDNKCEITEKTSCDNGCNGGLM 211

Query: 810 EPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKIL 867
             +  Y  ++ GLE E  YPY    GE+ +C +D  K+ +    +F +    E  +   L
Sbjct: 212 TNAYNYLLESGGLEEESSYPY---TGERGECKFDPEKITVRI-TNFTNIPVDENQIAAYL 267

Query: 868 YKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYG-------KQDNI 917
            K GPL++ +N+  +  Y G    P+      CS   L H VLLVGYG       +  N 
Sbjct: 268 VKNGPLAMGVNAIFMQTYIGGVSCPL-----ICSKKRLNHGVLLVGYGAKGFSILRLGNK 322

Query: 918 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           PYW+++NSWG    ++G++K+ RG+  CGI  +   A +
Sbjct: 323 PYWIIKNSWGKKWGEDGYYKLCRGHGMCGINTMVSAAMV 361



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 159/339 (46%), Gaps = 52/339 (15%)

Query: 284 DNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEF 332
           DNE +L T   FK F+   GR Y+  EE   R   F Q+  +  E         +G ++F
Sbjct: 44  DNE-LLRTEKKFKVFMENYGRSYSTREEYLRRLGIFSQNMLRAAEHQALDPTAVHGVTQF 102

Query: 333 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 392
           SD +  E          E+ Y            +   +E +G +P+ +DWR+K       
Sbjct: 103 SDLTEVEF---------EKLYTG-XPSTNTAGGVAPPLEVEG-LPENFDWREKGAVTEVK 151

Query: 393 DQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDGLEQ 446
            Q  CGSCWAFS  G +EG   + TGKLV  S+ QL++C  +C     + C  GC+G   
Sbjct: 152 IQGRCGSCWAFSTTGSIEGANFLATGKLVSLSEQQLLDCDNKCEITEKTSCDNGCNGGLM 211

Query: 447 PIEYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKIL 502
              Y +     GLE E  YPY    GE+ +C +D  K+ +    +F      E  +   L
Sbjct: 212 TNAYNYLLESGGLEEESSYPY---TGERGECKFDPEKITVRI-TNFTNIPVDENQIAAYL 267

Query: 503 YKYGPLSVGLNSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYG-------KQDDI 552
            K GPL++G+N+  +  Y G    P+      CS   L H VLLVGYG       +  + 
Sbjct: 268 VKNGPLAMGVNAIFMQTYIGGVSCPL-----ICSKKRLNHGVLLVGYGAKGFSILRLGNK 322

Query: 553 PYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           PYW+ +NSWG    ++G++K+ RG+  CGI  +   A +
Sbjct: 323 PYWIIKNSWGKKWGEDGYYKLCRGHGMCGINTMVSAAMV 361



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 126/244 (51%), Gaps = 33/244 (13%)

Query: 3   MEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
           +EVE    +P+ +DWR+K        Q  CGSCWAFS  G +EG   + TGKLV  S+ Q
Sbjct: 130 LEVEG---LPENFDWREKGAVTEVKIQGRCGSCWAFSTTGSIEGANFLATGKLVSLSEQQ 186

Query: 63  LVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDK 112
           L++C  +C         +GC+G     +  Y  ++ GLE E  YPY    GE+ +C +D 
Sbjct: 187 LLDCDNKCEITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPY---TGERGECKFDP 243

Query: 113 SKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSP 168
            K+ +    +F +    E  +   L K GPL++ +N+  +  Y G    P+      CS 
Sbjct: 244 EKITVRI-TNFTNIPVDENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSCPL-----ICSK 297

Query: 169 YDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 221
             L H VLLVGYG       +  N PYW+++NSWG    ++G++K+ RG+  CGI  +  
Sbjct: 298 KRLNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGKKWGEDGYYKLCRGHGMCGINTMVS 357

Query: 222 YATI 225
            A +
Sbjct: 358 AAMV 361


>gi|21218381|gb|AAM44058.1|AF510740_1 cathepsin L1 [Schistosoma japonicum]
          Length = 317

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 149/318 (46%), Gaps = 27/318 (8%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRS 336
           EN+ E +  F +   +QY ++ + ++RF  FK +  K       ER    YG + +SD +
Sbjct: 14  ENVGEMYAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLT 72

Query: 337 PEEILCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            +E   +T     W   +    +  R +V          G +P+ +DWR+K       +Q
Sbjct: 73  TDE-FSRTHLTAPWRASSKRNTIPPRREV----------GDIPNNFDWREKGAVTEVKNQ 121

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQA 454
             CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC G              
Sbjct: 122 GMCGSCWAFSTTGNIESQWFRKTGKLLSLSEQQLVDCDSLDDGCNGGLPSNAYESIIRMG 181

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E +YPY   + +  KC      V  +             +   LY +  +SVG+N+
Sbjct: 182 GLMLEDNYPY---DAKNEKCHLKVGNVAAYINSSVNLTQDESELAIWLYHHSAISVGMNA 238

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIPYWLARNSWGPIGPDEGFFKI 573
            L+ FY           CS Y L HAVLLVGYG  + + P+W+ +NSWG    ++G+F++
Sbjct: 239 LLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGEKGYFRM 298

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+  CGI   A  A I
Sbjct: 299 YRGDGTCGINTGATSALI 316



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 151/320 (47%), Gaps = 32/320 (10%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRS 702
           EN+ E +  F +   +QY ++ + ++RF  FK +  K       ER    YG + +SD +
Sbjct: 14  ENVGEMYAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLT 72

Query: 703 PEEILCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            +E   +T     W   +    +  R +V          G +P+ +DWR+K       +Q
Sbjct: 73  TDE-FSRTHLTAPWRASSKRNTIPPRREV----------GDIPNNFDWREKGAVTEVKNQ 121

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---TH 817
             CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC+G    PS  Y     
Sbjct: 122 GMCGSCWAFSTTGNIESQWFRKTGKLLSLSEQQLVDCDSLDDGCNGGL--PSNAYESIIR 179

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             GL  E +YPY   N    KC      V  +             +   LY +  +SV +
Sbjct: 180 MGGLMLEDNYPYDAKNE---KCHLKVGNVAAYINSSVNLTQDESELAIWLYHHSAISVGM 236

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFF 936
           N+ L+  Y           CS Y L HAVLLVGYG  + N P+W+V+NSWG    ++G+F
Sbjct: 237 NALLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGEKGYF 296

Query: 937 KIERGNNACGIEQIAGYATI 956
           ++ RG+  CGI   A  A I
Sbjct: 297 RMYRGDGTCGINTGATSALI 316



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 111/221 (50%), Gaps = 9/221 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P+ +DWR+K       +Q  CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C  
Sbjct: 101 GDIPNNFDWREKGAVTEVKNQGMCGSCWAFSTTGNIESQWFRKTGKLLSLSEQQLVDCDS 160

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC+G    PS  Y       GL  E +YPY   N    KC      V  +       
Sbjct: 161 LDDGCNGGL--PSNAYESIIRMGGLMLEDNYPYDAKNE---KCHLKVGNVAAYINSSVNL 215

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQD 184
                 +   LY +  +SV +N+ L+  Y           CS Y L HAVLLVGYG  + 
Sbjct: 216 TQDESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSEK 275

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           N P+W+V+NSWG    ++G+F++ RG+  CGI   A  A I
Sbjct: 276 NEPFWIVKNSWGVEWGEKGYFRMYRGDGTCGINTGATSALI 316


>gi|50355621|dbj|BAD29959.1| cysteine protease [Daucus carota]
          Length = 361

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 167/362 (46%), Gaps = 36/362 (9%)

Query: 617 VASCLCLPSLTDRITDQVVARVDTLAI----EGSLTFDNENILETFKAFIVKRGRQYAND 672
           +  CLC  +        ++A +  L        S T    ++ E  + ++++ GR Y ++
Sbjct: 12  LVQCLCTSTTNMAFKHFMIAALILLGAWACQATSRTLPEASMFERHEQWMIQYGRVYKDE 71

Query: 673 EEIKERF----------EYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 722
            E   RF          E F +DG + + +   +EF+D++ EE      F+ S   Y+  
Sbjct: 72  AEKSVRFQIFMDNVKFIEEFNKDGRQSY-KLAVNEFADQTNEE------FQASRNGYKMA 124

Query: 723 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 782
           V+ R   +  L   E    VP + DWRKK    P  DQ  CGSCWAFS     EG   +K
Sbjct: 125 VSSRPS-QTTLFRYENVTAVPSSMDWRKKGAVTPVKDQGQCGSCWAFSTIAATEGITKLK 183

Query: 783 TGKLVEFSKSQLVECAK--QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKC 839
           TGKL+  S+ +LV+C K  +  GC+G + E   E+     G+  E  YPY  A+G     
Sbjct: 184 TGKLISLSEQELVDCDKTGEDQGCEGGYMEDGFEFIVKNKGIALEASYPYTAADG-TCNS 242

Query: 840 AYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCS 898
             + S+    +G + +  N    + K +    P+SV ++ S +   +  + +   +  C 
Sbjct: 243 KEEASRAAKISGYEKVPANSETALLKAVANQ-PVSVSIDASGVAFQFYSSGVFTGE--CG 299

Query: 899 PYDLGHAVLLVGYGK-QDNIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGY 953
             DL H V  VGYGK  D   YWLV+NSWG    D G+  ++RG  A    CGI   A Y
Sbjct: 300 T-DLDHGVTAVGYGKTSDGTKYWLVKNSWGASWGDSGYIMMQRGVAAKGGLCGIAMDASY 358

Query: 954 AT 955
            T
Sbjct: 359 PT 360



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 163/364 (44%), Gaps = 39/364 (10%)

Query: 251 VASCLCLPSLTDRITDQVVARVDTLAI----EGSLTFDNENILETFKAFIVKRGRQYAND 306
           +  CLC  +        ++A +  L        S T    ++ E  + ++++ GR Y ++
Sbjct: 12  LVQCLCTSTTNMAFKHFMIAALILLGAWACQATSRTLPEASMFERHEQWMIQYGRVYKDE 71

Query: 307 EEIKERF----------EYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 356
            E   RF          E F +DG + + +   +EF+D++ EE      F+ S   Y+  
Sbjct: 72  AEKSVRFQIFMDNVKFIEEFNKDGRQSY-KLAVNEFADQTNEE------FQASRNGYKMA 124

Query: 357 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 416
           V+ R   +  L   E    VP + DWRKK    P  DQ  CGSCWAFS     EG   +K
Sbjct: 125 VSSRPS-QTTLFRYENVTAVPSSMDWRKKGAVTPVKDQGQCGSCWAFSTIAATEGITKLK 183

Query: 417 TGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEY-THQAGLESEKDYPYRNGNGEKFK 473
           TGKL+  S+ +LV+C K      GC+G  +E   E+     G+  E  YPY   +G    
Sbjct: 184 TGKLISLSEQELVDCDKTGED-QGCEGGYMEDGFEFIVKNKGIALEASYPYTAADG-TCN 241

Query: 474 CAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLI--HFYNGTPIRKNDET 531
              + S+    +G + +  N    + K +    P+SV +++  +   FY+         T
Sbjct: 242 SKEEASRAAKISGYEKVPANSETALLKAVANQ-PVSVSIDASGVAFQFYSSGVFTGECGT 300

Query: 532 CSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEGFFKIERGNNA----CGIEQIA 586
               DL H V  VGYGK  D   YWL +NSWG    D G+  ++RG  A    CGI   A
Sbjct: 301 ----DLDHGVTAVGYGKTSDGTKYWLVKNSWGASWGDSGYIMMQRGVAAKGGLCGIAMDA 356

Query: 587 GYAT 590
            Y T
Sbjct: 357 SYPT 360



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 113/232 (48%), Gaps = 14/232 (6%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           L   E    VP + DWRKK    P  DQ  CGSCWAFS     EG   +KTGKL+  S+ 
Sbjct: 134 LFRYENVTAVPSSMDWRKKGAVTPVKDQGQCGSCWAFSTIAATEGITKLKTGKLISLSEQ 193

Query: 62  QLVECAK--QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
           +LV+C K  +  GC+G + E   E+     G+  E  YPY  A+G       + S+    
Sbjct: 194 ELVDCDKTGEDQGCEGGYMEDGFEFIVKNKGIALEASYPYTAADG-TCNSKEEASRAAKI 252

Query: 119 TGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
           +G + +  N    + K +    P+SV ++ S +   +  + +   +  C   DL H V  
Sbjct: 253 SGYEKVPANSETALLKAVANQ-PVSVSIDASGVAFQFYSSGVFTGE--CGT-DLDHGVTA 308

Query: 178 VGYGK-QDNIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYAT 224
           VGYGK  D   YWLV+NSWG    D G+  ++RG  A    CGI   A Y T
Sbjct: 309 VGYGKTSDGTKYWLVKNSWGASWGDSGYIMMQRGVAAKGGLCGIAMDASYPT 360



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 969  DLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYAT 1023
            DL H V  VGYGK  D   YWLV+NSWG    D G+  ++RG  A    CGI   A Y T
Sbjct: 301  DLDHGVTAVGYGKTSDGTKYWLVKNSWGASWGDSGYIMMQRGVAAKGGLCGIAMDASYPT 360


>gi|395502422|ref|XP_003755580.1| PREDICTED: pro-cathepsin H [Sarcophilus harrisii]
          Length = 334

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 124/228 (54%), Gaps = 15/228 (6%)

Query: 735 EVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 793
            V + GP P++ DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL+  ++ Q
Sbjct: 108 HVRRLGPYPESVDWRKKGNFVSPVKNQGGCGSCWTFSTTGGLESAVAIATGKLLSLAEQQ 167

Query: 794 LVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 850
           LV+CA+  +  GC+G     + EY  +  G+  E  YPY+  +G    C +  +K   F 
Sbjct: 168 LVDCAQDFNNHGCNGGLPSQAFEYIMYNKGIMGEDTYPYEGKDGT---CKFQPNKAIAFV 224

Query: 851 GKDFLHFNG--SETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDE-TCSPYDLGHA 905
            KD  +      E M + +  + P+S    +  D +  + G  I  N + + SP  + HA
Sbjct: 225 -KDVANITAYDEEAMTEAVAHHNPVSFAFEVTDDFLSYHKG--IYSNPKCSKSPDKVNHA 281

Query: 906 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
           VL VGYGK++ IPYW+V+NSWG    + G+F IERG N CG+   A Y
Sbjct: 282 VLAVGYGKENGIPYWIVKNSWGTSWGNNGYFLIERGKNMCGLADCASY 329



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 124/228 (54%), Gaps = 15/228 (6%)

Query: 4   EVEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
            V + GP P++ DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL+  ++ Q
Sbjct: 108 HVRRLGPYPESVDWRKKGNFVSPVKNQGGCGSCWTFSTTGGLESAVAIATGKLLSLAEQQ 167

Query: 63  LVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
           LV+CA+  +  GC+G     + EY  +  G+  E  YPY+  +G    C +  +K   F 
Sbjct: 168 LVDCAQDFNNHGCNGGLPSQAFEYIMYNKGIMGEDTYPYEGKDGT---CKFQPNKAIAFV 224

Query: 120 GKDFLHFNG--SETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDE-TCSPYDLGHA 174
            KD  +      E M + +  + P+S    +  D +  + G  I  N + + SP  + HA
Sbjct: 225 -KDVANITAYDEEAMTEAVAHHNPVSFAFEVTDDFLSYHKG--IYSNPKCSKSPDKVNHA 281

Query: 175 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           VL VGYGK++ IPYW+V+NSWG    + G+F IERG N CG+   A Y
Sbjct: 282 VLAVGYGKENGIPYWIVKNSWGTSWGNNGYFLIERGKNMCGLADCASY 329



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 120/228 (52%), Gaps = 14/228 (6%)

Query: 369 EVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 427
            V + GP P++ DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL+  ++ Q
Sbjct: 108 HVRRLGPYPESVDWRKKGNFVSPVKNQGGCGSCWTFSTTGGLESAVAIATGKLLSLAEQQ 167

Query: 428 LVECAKQCSGCGGCDGL-EQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFT 485
           LV+CA+  +  G   GL  Q  EY  +  G+  E  YPY   +G    C +  +K   F 
Sbjct: 168 LVDCAQDFNNHGCNGGLPSQAFEYIMYNKGIMGEDTYPYEGKDGT---CKFQPNKAIAFV 224

Query: 486 GKDFLYFNG--SETMKKILYKYGPLSVG--LNSHLIHFYNGTPIRKNDE-TCSPYDLGHA 540
            KD         E M + +  + P+S    +    + ++ G  I  N + + SP  + HA
Sbjct: 225 -KDVANITAYDEEAMTEAVAHHNPVSFAFEVTDDFLSYHKG--IYSNPKCSKSPDKVNHA 281

Query: 541 VLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
           VL VGYGK++ IPYW+ +NSWG    + G+F IERG N CG+   A Y
Sbjct: 282 VLAVGYGKENGIPYWIVKNSWGTSWGNNGYFLIERGKNMCGLADCASY 329



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            SP  + HAVL VGYGK++ IPYW+V+NSWG    + G+F IERG N CG+   A Y
Sbjct: 274  SPDKVNHAVLAVGYGKENGIPYWIVKNSWGTSWGNNGYFLIERGKNMCGLADCASY 329


>gi|309752918|gb|ADO85436.1| cathepsin [Pieris rapae granulovirus]
          Length = 339

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 158/314 (50%), Gaps = 20/314 (6%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSE 697
           ++T++ EN    F+ FI K  + YA D+E   ++E FK        ++   K   +  + 
Sbjct: 24  TVTYNLENSDNIFEDFIKKYNKSYATDQERAIKYENFKNNLKMINDKNNGSKDAVFDINA 83

Query: 698 FSDRSPEEILCKT-GFKWSERTYERIVADREK-VEKMLMEVEKDGPVPDAWDWRKKNVTG 755
           FSD +  ++L +T GF+   +       D  K     +++ E    +P+++DWR K+   
Sbjct: 84  FSDLNKNDLLRRTTGFRMGLKKNSYYTPDVSKECNVQVIKSEPQIILPESFDWRDKHGVT 143

Query: 756 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE- 814
           P  +Q  CGSCWAFS    +E  Y IK  K ++ S+  L+ C    +GC G     ++E 
Sbjct: 144 PVKNQLECGSCWAFSAIANIESLYNIKHNKELDLSEQHLINCDSINNGCGGGLMHWALET 203

Query: 815 YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
              Q G+ SEKD PY    G    C   +  V + +G           ++++L   GP+S
Sbjct: 204 ILQQGGIVSEKDEPYY---GLDAVCKPKQFNVSI-SGCTRYVLKNENKLRELLIANGPIS 259

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           + ++   + DY         + C   + L HAVLLVGYG  +NIPYW+++NSWG    ++
Sbjct: 260 MAVDIIDVIDYKEGIT----DICENMNGLNHAVLLVGYGVHNNIPYWIMKNSWGEEWGEK 315

Query: 934 GFFKIERGNNACGI 947
           G+ +++R  N+CG+
Sbjct: 316 GYLRVQRNINSCGL 329



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 159/317 (50%), Gaps = 25/317 (7%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSE 331
           ++T++ EN    F+ FI K  + YA D+E   ++E FK        ++   K   +  + 
Sbjct: 24  TVTYNLENSDNIFEDFIKKYNKSYATDQERAIKYENFKNNLKMINDKNNGSKDAVFDINA 83

Query: 332 FSDRSPEEILCKT-GFKWSERTYERIVADREK-VEKMLMEVEKDGPVPDAWDWRKKNVTG 389
           FSD +  ++L +T GF+   +       D  K     +++ E    +P+++DWR K+   
Sbjct: 84  FSDLNKNDLLRRTTGFRMGLKKNSYYTPDVSKECNVQVIKSEPQIILPESFDWRDKHGVT 143

Query: 390 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIE 449
           P  +Q  CGSCWAFS    +E  Y IK  K ++ S+  L+ C    +GCGG  GL     
Sbjct: 144 PVKNQLECGSCWAFSAIANIESLYNIKHNKELDLSEQHLINCDSINNGCGG--GLMHWAL 201

Query: 450 YT--HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGP 507
            T   Q G+ SEKD PY    G    C   +  V + +G           ++++L   GP
Sbjct: 202 ETILQQGGIVSEKDEPYY---GLDAVCKPKQFNVSI-SGCTRYVLKNENKLRELLIANGP 257

Query: 508 LSVGLN-SHLIHFYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           +S+ ++   +I +  G       + C   + L HAVLLVGYG  ++IPYW+ +NSWG   
Sbjct: 258 ISMAVDIIDVIDYKEGIT-----DICENMNGLNHAVLLVGYGVHNNIPYWIMKNSWGEEW 312

Query: 566 PDEGFFKIERGNNACGI 582
            ++G+ +++R  N+CG+
Sbjct: 313 GEKGYLRVQRNINSCGL 329



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 10/208 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+++DWR K+   P  +Q +CGSCWAFS    +E  Y IK  K ++ S+  L+ C    
Sbjct: 130 LPESFDWRDKHGVTPVKNQLECGSCWAFSAIANIESLYNIKHNKELDLSEQHLINCDSIN 189

Query: 71  SGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           +GC G     ++E    Q G+ SEKD PY    G    C   +  V + +G         
Sbjct: 190 NGCGGGLMHWALETILQQGGIVSEKDEPYY---GLDAVCKPKQFNVSI-SGCTRYVLKNE 245

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIPY 188
             ++++L   GP+S+ ++   + DY         + C   + L HAVLLVGYG  +NIPY
Sbjct: 246 NKLRELLIANGPISMAVDIIDVIDYKEGIT----DICENMNGLNHAVLLVGYGVHNNIPY 301

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGI 216
           W+++NSWG    ++G+ +++R  N+CG+
Sbjct: 302 WIMKNSWGEEWGEKGYLRVQRNINSCGL 329



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 36/46 (78%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            L HAVLLVGYG  ++IPYW+++NSWG    ++G+ +++R  N+CG+
Sbjct: 284  LNHAVLLVGYGVHNNIPYWIMKNSWGEEWGEKGYLRVQRNINSCGL 329


>gi|388521567|gb|AFK48845.1| unknown [Medicago truncatula]
          Length = 343

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 153/318 (48%), Gaps = 44/318 (13%)

Query: 661 FIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILCKTGF 712
           F  + G++Y   +E+K RF+ F ++       +KK   Y  G + F+D + EE   ++  
Sbjct: 47  FANRYGKRYDTVDEMKRRFKIFSENLQLIKSTNKKRLGYTLGVNHFADWTWEEF--RSHR 104

Query: 713 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 772
             + +     +    ++  +++  EKD        WRK+ +     DQ  CGSCW FS  
Sbjct: 105 LGAAQNCSATLKGNHRITDVVLPAEKD--------WRKEGIVSEVKDQGHCGSCWTFSTT 156

Query: 773 GMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPY 829
           G LE  YA   GK +  S+ QLV+CA   +  GC+G     + EY  +  GLE+E+ YPY
Sbjct: 157 GALESAYAQAFGKNISLSEQQLVDCAGAYNNFGCNGGLPSQAFEYIKYNGGLETEEVYPY 216

Query: 830 KNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD---- 884
              NG    C +    V +   G   +     + +K  +    P+SV     ++ D    
Sbjct: 217 TGQNG---LCKFTSENVAVQVLGSVNITLGAEDELKHAVAFARPVSVAF--QVVDDFRLY 271

Query: 885 ----YNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
               Y GT       TC  +P D+ HAVL VGYG +D +PYWL++NSWG    D G+FK+
Sbjct: 272 KKGVYTGT-------TCGSTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGGEWGDHGYFKM 324

Query: 939 ERGNNACGIEQIAGYATI 956
           E G N CG+   + Y  +
Sbjct: 325 EMGKNMCGVATCSSYPVV 342



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 149/316 (47%), Gaps = 39/316 (12%)

Query: 295 FIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILCKTGF 346
           F  + G++Y   +E+K RF+ F ++       +KK   Y  G + F+D + EE   ++  
Sbjct: 47  FANRYGKRYDTVDEMKRRFKIFSENLQLIKSTNKKRLGYTLGVNHFADWTWEEF--RSHR 104

Query: 347 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 406
             + +     +    ++  +++  EKD        WRK+ +     DQ  CGSCW FS  
Sbjct: 105 LGAAQNCSATLKGNHRITDVVLPAEKD--------WRKEGIVSEVKDQGHCGSCWTFSTT 156

Query: 407 GMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPY 464
           G LE  YA   GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GLE+E+ YPY
Sbjct: 157 GALESAYAQAFGKNISLSEQQLVDCAGAYNNFGCNGGLPSQAFEYIKYNGGLETEEVYPY 216

Query: 465 RNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSVGLNS------HLI 517
              NG    C +    V +   G   +     + +K  +    P+SV          +  
Sbjct: 217 TGQNG---LCKFTSENVAVQVLGSVNITLGAEDELKHAVAFARPVSVAFQVVDDFRLYKK 273

Query: 518 HFYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
             Y GT       TC  +P D+ HAVL VGYG +D +PYWL +NSWG    D G+FK+E 
Sbjct: 274 GVYTGT-------TCGSTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGGEWGDHGYFKMEM 326

Query: 576 GNNACGIEQIAGYATI 591
           G N CG+   + Y  +
Sbjct: 327 GKNMCGVATCSSYPVV 342



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 116/232 (50%), Gaps = 26/232 (11%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRK+ +     DQ  CGSCW FS  G LE  YA   GK +  S+ QLV+CA
Sbjct: 123 DVVLPAEKDWRKEGIVSEVKDQGHCGSCWTFSTTGALESAYAQAFGKNISLSEQQLVDCA 182

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDF 123
              +  GC+G     + EY  +  GLE+E+ YPY   NG    C +    V +   G   
Sbjct: 183 GAYNNFGCNGGLPSQAFEYIKYNGGLETEEVYPYTGQNG---LCKFTSENVAVQVLGSVN 239

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETC--SPYDLGH 173
           +     + +K  +    P+SV     ++ D        Y GT       TC  +P D+ H
Sbjct: 240 ITLGAEDELKHAVAFARPVSVAF--QVVDDFRLYKKGVYTGT-------TCGSTPMDVNH 290

Query: 174 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           AVL VGYG +D +PYWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 291 AVLAVGYGIEDGVPYWLIKNSWGGEWGDHGYFKMEMGKNMCGVATCSSYPVV 342


>gi|146084829|ref|XP_001465113.1| cysteine peptidase A (CPA) [Leishmania infantum JPCM5]
 gi|134069209|emb|CAM67356.1| cysteine peptidase A (CPA) [Leishmania infantum JPCM5]
          Length = 354

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 154/340 (45%), Gaps = 31/340 (9%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 685
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 18  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 77

Query: 686 GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 740
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 78  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 133

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
                 DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C   
Sbjct: 134 ------DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNI 187

Query: 801 CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
             GC+G   + ++++    H   + +E  YPY +A G +  C +D   V           
Sbjct: 188 DDGCNGGLMQQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIKGYMSLP 246

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 917
           +  E +   + K GP++V +++     Y G  +      C    L H VL+VG+ +Q   
Sbjct: 247 HDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAKP 302

Query: 918 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           PYW+V+NSWG    ++G+ ++  G+N C ++     ATID
Sbjct: 303 PYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYVVTATID 342



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 152/341 (44%), Gaps = 32/341 (9%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 319
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 18  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 77

Query: 320 GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 374
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 78  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 133

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
                 DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C   
Sbjct: 134 ------DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNI 187

Query: 435 CSGCGGCDGLEQPIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY 491
             GC G   ++Q +++    H   + +E  YPY +  G +  C +D   V          
Sbjct: 188 DDGCNG-GLMQQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIKGYMSL 245

Query: 492 FNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
            +  E +   + K GP++V +++     Y G  +      C    L H VL+VG+ +Q  
Sbjct: 246 PHDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAK 301

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
            PYW+ +NSWG    ++G+ ++  G+N C ++     ATID
Sbjct: 302 PPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYVVTATID 342



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 8/214 (3%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C     GC+G
Sbjct: 134 DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNIDDGCNG 193

Query: 76  CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 132
              + ++++    H   + +E  YPY +A G +  C +D   V           +  E +
Sbjct: 194 GLMQQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIKGYMSLPHDEEEI 252

Query: 133 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 192
              + K GP++V +++     Y G  +      C    L H VL+VG+ +Q   PYW+V+
Sbjct: 253 AAYVGKNGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAKPPYWIVK 308

Query: 193 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           NSWG    ++G+ ++  G+N C ++     ATID
Sbjct: 309 NSWGSSWGEKGYIRLAMGSNQCLLKNYVVTATID 342



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L H VL+VG+ +Q   PYW+V+NSWG    ++G+ ++  G+N C ++     ATI
Sbjct: 282  CFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYVVTATI 341

Query: 1025 D 1025
            D
Sbjct: 342  D 342


>gi|13905172|gb|AAH06878.1| Cathepsin H [Mus musculus]
          Length = 333

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 153/316 (48%), Gaps = 30/316 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGT-----SEFSDRSPEEILCK 709
           FK+++ +  + Y+   E   R + F  +  K    ++R  T     ++FSD S  EI  K
Sbjct: 33  FKSWMKQHQKTYS-SVEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEI--K 89

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             F WSE   +   A +         +   GP P + DWRKK NV  P  +Q ACGSCW 
Sbjct: 90  HKFLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVINQGACGSCWT 141

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI +GK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 142 FSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEED 201

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVL--LNSDLI 882
            YPY    G+   C ++  K   F      +  N    M + +  Y P+S    +  D +
Sbjct: 202 SYPYI---GKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFL 258

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
              +G    K+    +P  + HAVL VGYG+Q+ + YW+V+NSWG    + G+F IERG 
Sbjct: 259 MYKSGVYSSKSCHK-TPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGK 317

Query: 943 NACGIEQIAGYATIDV 958
           N CG+   A Y    V
Sbjct: 318 NMCGLAACASYPIPQV 333



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 152/316 (48%), Gaps = 29/316 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGT-----SEFSDRSPEEILCK 343
           FK+++ +  + Y+   E   R + F  +  K    ++R  T     ++FSD S  EI  K
Sbjct: 33  FKSWMKQHQKTYS-SVEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEI--K 89

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             F WSE   +   A +         +   GP P + DWRKK NV  P  +Q ACGSCW 
Sbjct: 90  HKFLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVINQGACGSCWT 141

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI +GK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 142 FSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEED 201

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVG--LNSHLI 517
            YPY    G+   C ++  K   F      +  N    M + +  Y P+S    +    +
Sbjct: 202 SYPYI---GKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFL 258

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            + +G    K+    +P  + HAVL VGYG+Q+ + YW+ +NSWG    + G+F IERG 
Sbjct: 259 MYKSGVYSSKSCHK-TPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGK 317

Query: 578 NACGIEQIAGYATIDV 593
           N CG+   A Y    V
Sbjct: 318 NMCGLAACASYPIPQV 333



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 116/226 (51%), Gaps = 11/226 (4%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK NV  P  +Q  CGSCW FS  G LE   AI +GK++  ++ QLV+CA
Sbjct: 112 GPYPSSMDWRKKGNVVSPVINQGACGSCWTFSTTGALESAVAIASGKMLSLAEQQLVDCA 171

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPY    G+   C ++  K   F      
Sbjct: 172 QAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYI---GKDSSCRFNPQKAVAFVKNVVN 228

Query: 124 LHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           +  N    M + +  Y P+S    +  D +   +G    K+    +P  + HAVL VGYG
Sbjct: 229 ITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHK-TPDKVNHAVLAVGYG 287

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           +Q+ + YW+V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 288 EQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAACASYPIPQV 333



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 2/70 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V + ++C  +P  + HAVL VGYG+Q+ + YW+V+NSWG    + G+F IERG N CG+ 
Sbjct: 264  VYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLA 323

Query: 1017 QIAGYATIDV 1026
              A Y    V
Sbjct: 324  ACASYPIPQV 333


>gi|224113123|ref|XP_002316398.1| predicted protein [Populus trichocarpa]
 gi|222865438|gb|EEF02569.1| predicted protein [Populus trichocarpa]
          Length = 327

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 48/333 (14%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEIL 707
           E FK FI +  ++YA  EE   RF  F ++  +  E         +G + F D + EE  
Sbjct: 12  EKFKMFIKEHNKEYATREEYVHRFGIFGKNLIRAVEHQALDPTAIHGVTPFMDLTEEEF- 70

Query: 708 CKTGFKWSERTYERIVADRE-KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
                   ER Y  ++      VEK  +       +PD++DWR+K        Q +CGSC
Sbjct: 71  --------ERMYAGVLGGGTVPVEKGSVSFMDASGLPDSFDWREKGAVTDVKIQGSCGSC 122

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTH 817
           WAFS  G +EG   I TGKL+  S+ QLV+C + C          GC G     +  Y  
Sbjct: 123 WAFSTTGSVEGANFIATGKLLNLSEQQLVDCDRVCDKTDKASCDDGCGGGLMTNAYRYLI 182

Query: 818 QA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSV 875
           +A GL+ E  YPY   +GE   C +D  K+ +    +F      E  +   L  +GPL++
Sbjct: 183 EAGGLQEESSYPYTGKSGE---CKFDPEKIAVKVA-NFTSIAVDENQIAANLVHHGPLAI 238

Query: 876 LLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNI-------PYWLVRNS 925
            LN+  +  Y G    P+      C    L H VLLVGYG +          PYW+++NS
Sbjct: 239 GLNAIFMQTYIGGVSCPL-----ICGKKWLNHGVLLVGYGARGYSILRFGYKPYWIIKNS 293

Query: 926 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
           WG    ++G++++ RG+  CG+ ++       V
Sbjct: 294 WGNHWGEKGYYRLCRGHGMCGMNKMVSAVVTKV 326



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 152/333 (45%), Gaps = 47/333 (14%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEIL 341
           E FK FI +  ++YA  EE   RF  F ++  +  E         +G + F D + EE  
Sbjct: 12  EKFKMFIKEHNKEYATREEYVHRFGIFGKNLIRAVEHQALDPTAIHGVTPFMDLTEEEF- 70

Query: 342 CKTGFKWSERTYERIVADRE-KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
                   ER Y  ++      VEK  +       +PD++DWR+K        Q +CGSC
Sbjct: 71  --------ERMYAGVLGGGTVPVEKGSVSFMDASGLPDSFDWREKGAVTDVKIQGSCGSC 122

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCGGCDGLEQPIEYT 451
           WAFS  G +EG   I TGKL+  S+ QLV+C + C          GCGG   +     Y 
Sbjct: 123 WAFSTTGSVEGANFIATGKLLNLSEQQLVDCDRVCDKTDKASCDDGCGG-GLMTNAYRYL 181

Query: 452 HQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSV 510
            +A GL+ E  YPY   +GE   C +D  K+ +              +   L  +GPL++
Sbjct: 182 IEAGGLQEESSYPYTGKSGE---CKFDPEKIAVKVANFTSIAVDENQIAANLVHHGPLAI 238

Query: 511 GLNSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLARNS 560
           GLN+  +  Y G    P+      C    L H VLLVGYG +          PYW+ +NS
Sbjct: 239 GLNAIFMQTYIGGVSCPL-----ICGKKWLNHGVLLVGYGARGYSILRFGYKPYWIIKNS 293

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 593
           WG    ++G++++ RG+  CG+ ++       V
Sbjct: 294 WGNHWGEKGYYRLCRGHGMCGMNKMVSAVVTKV 326



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 117/238 (49%), Gaps = 30/238 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD++DWR+K        Q  CGSCWAFS  G +EG   I TGKL+  S+ QLV+C + C
Sbjct: 98  LPDSFDWREKGAVTDVKIQGSCGSCWAFSTTGSVEGANFIATGKLLNLSEQQLVDCDRVC 157

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                     GC G     +  Y  +A GL+ E  YPY   +GE   C +D  K+ +   
Sbjct: 158 DKTDKASCDDGCGGGLMTNAYRYLIEAGGLQEESSYPYTGKSGE---CKFDPEKIAVKVA 214

Query: 121 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 176
            +F      E  +   L  +GPL++ LN+  +  Y G    P+      C    L H VL
Sbjct: 215 -NFTSIAVDENQIAANLVHHGPLAIGLNAIFMQTYIGGVSCPL-----ICGKKWLNHGVL 268

Query: 177 LVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           LVGYG +          PYW+++NSWG    ++G++++ RG+  CG+ ++       V
Sbjct: 269 LVGYGARGYSILRFGYKPYWIIKNSWGNHWGEKGYYRLCRGHGMCGMNKMVSAVVTKV 326



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLV 990
            +  G  A G+  I     I  V     C    L H VLLVGYG +          PYW++
Sbjct: 231  VHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGARGYSILRFGYKPYWII 290

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 1026
            +NSWG    ++G++++ RG+  CG+ ++       V
Sbjct: 291  KNSWGNHWGEKGYYRLCRGHGMCGMNKMVSAVVTKV 326


>gi|390337642|ref|XP_780653.3| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 159/334 (47%), Gaps = 33/334 (9%)

Query: 643 IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GHKK 689
           +  SL+    +  E +  +  + G++Y +DEE   R   ++++             GH  
Sbjct: 13  VVSSLSMSFTDFDEDWNEWKNEHGKRYLSDEEEASRRLIWQKNLDIVIKHNLKYDLGHFT 72

Query: 690 HERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPDAW 746
           ++  G ++F+D   EE +   TGF+         V+   K  K    +     G +P   
Sbjct: 73  YD-LGINQFTDLQNEEFVAMMTGFR---------VSGTSKAAKGSTFLPPNNVGELPKTV 122

Query: 747 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 806
           DWR K    P  DQ  CGSCWAFS  G +EGQ+   TGKLV  S+  LV+C+ + +GCDG
Sbjct: 123 DWRTKGYVTPVKDQGQCGSCWAFSTTGSVEGQHFKATGKLVSLSEQNLVDCSGRDAGCDG 182

Query: 807 CFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETMK 864
            F + + +Y   A G+++E  YPYK  +G   KC + K+ V    TG   +     + ++
Sbjct: 183 GFMDRAFQYIIDAGGIDTEASYPYKAVDG---KCHFKKANVGATVTGYTDVTSGSEKALQ 239

Query: 865 KILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVR 923
           K +   GP+SV +++  +   +      N+  C    L H VL VGYG   D   YW+V+
Sbjct: 240 KAVAHVGPISVAIDASHMSFQHYKSGVYNEPGCDSTVLDHGVLAVGYGTSSDGTDYWIVK 299

Query: 924 NSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           NSW       G+  + R  +N CGI   A Y  +
Sbjct: 300 NSWAETWGMNGYVWMSRNKDNQCGIATNASYPLV 333



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 115/221 (52%), Gaps = 7/221 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P   DWR K    P  DQ  CGSCWAFS  G +EGQ+   TGKLV  S+  LV+C+ 
Sbjct: 116 GELPKTVDWRTKGYVTPVKDQGQCGSCWAFSTTGSVEGQHFKATGKLVSLSEQNLVDCSG 175

Query: 69  QCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHF 126
           + +GCDG F + + +Y   A G+++E  YPYK  +G   KC + K+ V    TG   +  
Sbjct: 176 RDAGCDGGFMDRAFQYIIDAGGIDTEASYPYKAVDG---KCHFKKANVGATVTGYTDVTS 232

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDN 185
              + ++K +   GP+SV +++  +   +      N+  C    L H VL VGYG   D 
Sbjct: 233 GSEKALQKAVAHVGPISVAIDASHMSFQHYKSGVYNEPGCDSTVLDHGVLAVGYGTSSDG 292

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YW+V+NSW       G+  + R  +N CGI   A Y  +
Sbjct: 293 TDYWIVKNSWAETWGMNGYVWMSRNKDNQCGIATNASYPLV 333



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 158/335 (47%), Gaps = 34/335 (10%)

Query: 277 IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GHKK 323
           +  SL+    +  E +  +  + G++Y +DEE   R   ++++             GH  
Sbjct: 13  VVSSLSMSFTDFDEDWNEWKNEHGKRYLSDEEEASRRLIWQKNLDIVIKHNLKYDLGHFT 72

Query: 324 HERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPDAW 380
           ++  G ++F+D   EE +   TGF+         V+   K  K    +     G +P   
Sbjct: 73  YD-LGINQFTDLQNEEFVAMMTGFR---------VSGTSKAAKGSTFLPPNNVGELPKTV 122

Query: 381 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG 440
           DWR K    P  DQ  CGSCWAFS  G +EGQ+   TGKLV  S+  LV+C+ + +GC G
Sbjct: 123 DWRTKGYVTPVKDQGQCGSCWAFSTTGSVEGQHFKATGKLVSLSEQNLVDCSGRDAGCDG 182

Query: 441 CDGLEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSETM 498
              +++  +Y   A G+++E  YPY+  +G   KC + K+ V    TG   +     + +
Sbjct: 183 -GFMDRAFQYIIDAGGIDTEASYPYKAVDG---KCHFKKANVGATVTGYTDVTSGSEKAL 238

Query: 499 KKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLA 557
           +K +   GP+SV +++  + F +      N+  C    L H VL VGYG   D   YW+ 
Sbjct: 239 QKAVAHVGPISVAIDASHMSFQHYKSGVYNEPGCDSTVLDHGVLAVGYGTSSDGTDYWIV 298

Query: 558 RNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           +NSW       G+  + R  +N CGI   A Y  +
Sbjct: 299 KNSWAETWGMNGYVWMSRNKDNQCGIATNASYPLV 333



 Score = 47.0 bits (110), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIE 1016
            V N+  C    L H VL VGYG   D   YW+V+NSW       G+  + R  +N CGI 
Sbjct: 266  VYNEPGCDSTVLDHGVLAVGYGTSSDGTDYWIVKNSWAETWGMNGYVWMSRNKDNQCGIA 325

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 326  TNASYPLV 333


>gi|2499879|sp|Q40143.1|CYSP3_SOLLC RecName: Full=Cysteine proteinase 3; Flags: Precursor
 gi|1235545|emb|CAA88629.1| pre-pro-cysteine proteinase [Solanum lycopersicum]
          Length = 356

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 150/314 (47%), Gaps = 28/314 (8%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHERYGTS------EFSDRSPEEILC 708
           +F  F ++  ++Y + EEIK+RFE F  +    + H R G S      EF+D + +E   
Sbjct: 56  SFARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDE--- 112

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
              F+  +    +  +   K    L  V     +P+  DWRK  +  P   Q  CGSCW 
Sbjct: 113 ---FRKHKLGASQNCSATTKGNLKLTNV----VLPETKDWRKDGIVSPVKAQGKCGSCWT 165

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEK 825
           FS  G LE  YA   GK +  S+ QLV+CA   +  GC+G     + EY     GL++E+
Sbjct: 166 FSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEE 225

Query: 826 DYPYKNANGEKFKCAYDKSK--VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLI 882
            YPY   NG    C + ++   VK+ +  + +       +K  +    P+SV        
Sbjct: 226 AYPYTGKNG---ICKFSQANIGVKVISSVN-ITLGAEYELKYAVALVRPVSVAFEVVKGF 281

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y        +   +P D+ HAVL VGYG ++  PYWL++NSWG    ++G+FK+E G 
Sbjct: 282 KQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTPYWLIKNSWGADWGEDGYFKMEMGK 341

Query: 943 NACGIEQIAGYATI 956
           N CG+   A Y  +
Sbjct: 342 NMCGVATCASYPIV 355



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 149/318 (46%), Gaps = 35/318 (11%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHERYGTS------EFSDRSPEEILC 342
           +F  F ++  ++Y + EEIK+RFE F  +    + H R G S      EF+D + +E   
Sbjct: 56  SFARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDE--- 112

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
              F+  +    +  +   K    L  V     +P+  DWRK  +  P   Q  CGSCW 
Sbjct: 113 ---FRKHKLGASQNCSATTKGNLKLTNV----VLPETKDWRKDGIVSPVKAQGKCGSCWT 165

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYTH-QAGLESEK 460
           FS  G LE  YA   GK +  S+ QLV+CA   +  G   GL  Q  EY     GL++E+
Sbjct: 166 FSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEE 225

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSV------GLN 513
            YPY   NG    C + ++ + +          G+E  +K  +    P+SV      G  
Sbjct: 226 AYPYTGKNG---ICKFSQANIGVKVISSVNITLGAEYELKYAVALVRPVSVAFEVVKGFK 282

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
            +    Y  T         +P D+ HAVL VGYG ++  PYWL +NSWG    ++G+FK+
Sbjct: 283 QYKSGVYASTECGD-----TPMDVNHAVLAVGYGVENGTPYWLIKNSWGADWGEDGYFKM 337

Query: 574 ERGNNACGIEQIAGYATI 591
           E G N CG+   A Y  +
Sbjct: 338 EMGKNMCGVATCASYPIV 355



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 111/221 (50%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWRK  +  P   Q  CGSCW FS  G LE  YA   GK +  S+ QLV+CA   
Sbjct: 139 LPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAF 198

Query: 71  S--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSK--VKLFTGKDFLH 125
           +  GC+G     + EY     GL++E+ YPY   NG    C + ++   VK+ +  + + 
Sbjct: 199 NNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNG---ICKFSQANIGVKVISSVN-IT 254

Query: 126 FNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
                 +K  +    P+SV          Y        +   +P D+ HAVL VGYG ++
Sbjct: 255 LGAEYELKYAVALVRPVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVEN 314

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
             PYWL++NSWG    ++G+FK+E G N CG+   A Y  +
Sbjct: 315 GTPYWLIKNSWGADWGEDGYFKMEMGKNMCGVATCASYPIV 355


>gi|228244|prf||1801240B Cys protease 2
          Length = 323

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 161/364 (44%), Gaps = 61/364 (16%)

Query: 610 AVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 669
           AV  LCGVA     PS                              E FK    K GRQY
Sbjct: 4   AVLFLCGVALAAASPSW-----------------------------EHFKG---KYGRQY 31

Query: 670 ANDEEIKERFEYFKQDG------HKKHER------YGTSEFSDRSPEEILCKTGFKWSER 717
            + EE   R   F+Q+       +KK+E          ++F D + EE            
Sbjct: 32  VDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEF---------NA 82

Query: 718 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEG 777
             +  +  R     +    ++ GP     DWR K    P  DQ  CGSCWAFS  G LEG
Sbjct: 83  VMKGNIPRRSAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEG 142

Query: 778 QYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG 834
           Q+ +KTG L+  ++ QLV+C++     GC+G +   + +Y     G+++E  YPY+  +G
Sbjct: 143 QHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEASYPYEARDG 202

Query: 835 EKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 893
               C +D + V           +GSET +++ +   GP+SV +++        +     
Sbjct: 203 ---SCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYY 259

Query: 894 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 952
           + +CSP  L HAVL VGYG +    +WLV+NSW     D G+ K+ R  NN CGI  +A 
Sbjct: 260 EPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVAS 319

Query: 953 YATI 956
           Y  +
Sbjct: 320 YPLV 323



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 160/365 (43%), Gaps = 62/365 (16%)

Query: 244 AVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 303
           AV  LCGVA     PS                              E FK    K GRQY
Sbjct: 4   AVLFLCGVALAAASPSW-----------------------------EHFKG---KYGRQY 31

Query: 304 ANDEEIKERFEYFKQDG------HKKHER------YGTSEFSDRSPEEILCKTGFKWSER 351
            + EE   R   F+Q+       +KK+E          ++F D + EE            
Sbjct: 32  VDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEF---------NA 82

Query: 352 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEG 411
             +  +  R     +    ++ GP     DWR K    P  DQ  CGSCWAFS  G LEG
Sbjct: 83  VMKGNIPRRSAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEG 142

Query: 412 QYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGN 468
           Q+ +KTG L+  ++ QLV+C++   G  GC+G  +    +Y     G+++E  YPY   +
Sbjct: 143 QHFLKTGSLISLAEQQLVDCSRP-YGPQGCNGGWMNDAFDYIKANNGIDTEASYPYEARD 201

Query: 469 GEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRK 527
           G    C +D + V           +GSET +++ +   GP+SV +++    F   +    
Sbjct: 202 G---SCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVY 258

Query: 528 NDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIA 586
            + +CSP  L HAVL VGYG +    +WL +NSW     D G+ K+ R  NN CGI  +A
Sbjct: 259 YEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVA 318

Query: 587 GYATI 591
            Y  +
Sbjct: 319 SYPLV 323



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 120/225 (53%), Gaps = 8/225 (3%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           ++ GP     DWR K    P  DQ  CGSCWAFS  G LEGQ+ +KTG L+  ++ QLV+
Sbjct: 102 KETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVD 161

Query: 66  CAKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           C++     GC+G +   + +Y     G+++E  YPY+  +G    C +D + V       
Sbjct: 162 CSRPYGPQGCNGGWMNDAFDYIKANNGIDTEASYPYEARDG---SCRFDSNSVAATCSGH 218

Query: 123 FLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
               +GSET +++ +   GP+SV +++        +     + +CSP  L HAVL VGYG
Sbjct: 219 TNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYG 278

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            +    +WLV+NSW     D G+ K+ R  NN CGI  +A Y  +
Sbjct: 279 SEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVASYPLV 323



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            + +CSP  L HAVL VGYG +    +WLV+NSW     D G+ K+ R  NN CGI  +A 
Sbjct: 260  EPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVAS 319

Query: 1021 YATI 1024
            Y  +
Sbjct: 320  YPLV 323


>gi|342305190|dbj|BAK55649.1| cathepsin O [Oplegnathus fasciatus]
          Length = 338

 Score =  147 bits (370), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 103/307 (33%), Positives = 146/307 (47%), Gaps = 36/307 (11%)

Query: 658 FKAFIVKRGRQY-ANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSDRSPE 704
           F +F     R Y  N EE   R   F Q+  K+H             +YG + FSD S +
Sbjct: 42  FDSFREHFHRMYEVNGEEFNRRHLNF-QNATKRHAYLNSLSTAPQSAKYGINRFSDLSQK 100

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E             Y R  ADR  +   L    K   +P  +DWR K V  P  +Q ACG
Sbjct: 101 EF---------RGLYLRASADRAPLFSGL----KTEGLPAKFDWRDKAVVAPVQNQQACG 147

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA--GLE 822
           SCWAFS+ G ++  +AI    L + S  Q+++C+ Q  GC+G     ++ +  Q    L 
Sbjct: 148 SCWAFSVVGAMQSVHAIGGSPLAQLSVQQVLDCSFQNHGCNGGSPFRALTWLKQTRVKLV 207

Query: 823 SEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
            + +Y YK   G    F  ++    VK FT  DF      E M   L ++GPL+ ++++ 
Sbjct: 208 PQSEYSYKAETGICHFFSQSHAGVAVKNFTAHDF--SGQEEAMMGQLVEHGPLAAIVDAV 265

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
              DY G  I+ +   CS     HAVL+VGY    +IPYW+V+NSWG    +EG+  I+ 
Sbjct: 266 SWQDYLGGIIQHH---CSSQWSNHAVLVVGYNTTGDIPYWIVQNSWGTTWGNEGYVYIKI 322

Query: 941 GNNACGI 947
           G N CGI
Sbjct: 323 GGNVCGI 329



 Score =  138 bits (348), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 101/308 (32%), Positives = 141/308 (45%), Gaps = 37/308 (12%)

Query: 292 FKAFIVKRGRQY-ANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSDRSPE 338
           F +F     R Y  N EE   R   F Q+  K+H             +YG + FSD S +
Sbjct: 42  FDSFREHFHRMYEVNGEEFNRRHLNF-QNATKRHAYLNSLSTAPQSAKYGINRFSDLSQK 100

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E             Y R  ADR  +   L    K   +P  +DWR K V  P  +Q ACG
Sbjct: 101 EF---------RGLYLRASADRAPLFSGL----KTEGLPAKFDWRDKAVVAPVQNQQACG 147

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGL-- 456
           SCWAFS+ G ++  +AI    L + S  Q+++C+ Q  GC G     + + +  Q  +  
Sbjct: 148 SCWAFSVVGAMQSVHAIGGSPLAQLSVQQVLDCSFQNHGCNGGSPF-RALTWLKQTRVKL 206

Query: 457 --ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
             +SE  Y    G    F  ++    VK FT  DF      E M   L ++GPL+  +++
Sbjct: 207 VPQSEYSYKAETGICHFFSQSHAGVAVKNFTAHDF--SGQEEAMMGQLVEHGPLAAIVDA 264

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
                Y G  I+ +   CS     HAVL+VGY    DIPYW+ +NSWG    +EG+  I+
Sbjct: 265 VSWQDYLGGIIQHH---CSSQWSNHAVLVVGYNTTGDIPYWIVQNSWGTTWGNEGYVYIK 321

Query: 575 RGNNACGI 582
            G N CGI
Sbjct: 322 IGGNVCGI 329



 Score =  134 bits (338), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 9/210 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K V  P  +Q  CGSCWAFS+ G ++  +AI    L + S  Q+++C+ Q 
Sbjct: 125 LPAKFDWRDKAVVAPVQNQQACGSCWAFSVVGAMQSVHAIGGSPLAQLSVQQVLDCSFQN 184

Query: 71  SGCDGCFFEPSIEYTHQA--GLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHF 126
            GC+G     ++ +  Q    L  + +Y YK   G    F  ++    VK FT  DF   
Sbjct: 185 HGCNGGSPFRALTWLKQTRVKLVPQSEYSYKAETGICHFFSQSHAGVAVKNFTAHDF--S 242

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
              E M   L ++GPL+ ++++    DY G  I+ +   CS     HAVL+VGY    +I
Sbjct: 243 GQEEAMMGQLVEHGPLAAIVDAVSWQDYLGGIIQHH---CSSQWSNHAVLVVGYNTTGDI 299

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           PYW+V+NSWG    +EG+  I+ G N CGI
Sbjct: 300 PYWIVQNSWGTTWGNEGYVYIKIGGNVCGI 329



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/51 (52%), Positives = 33/51 (64%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS     HAVL+VGY    DIPYW+V+NSWG    +EG+  I+ G N CGI
Sbjct: 279  CSSQWSNHAVLVVGYNTTGDIPYWIVQNSWGTTWGNEGYVYIKIGGNVCGI 329


>gi|443724292|gb|ELU12369.1| hypothetical protein CAPTEDRAFT_165495 [Capitella teleta]
          Length = 351

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 157/342 (45%), Gaps = 28/342 (8%)

Query: 634 VVARVDTLAIEGSLTFDNENILETF-KAFIVKRGRQYANDEEIK------------ERFE 680
           +V   + L  +  L F N+   E   + F     R Y   EE++            E   
Sbjct: 19  MVPMTNILRPDTILRFPNQVPFEKLWQDFKTVHERNYGETEEMQRKEVFRNNLKKIEMHN 78

Query: 681 YFKQDGHKKHERYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKD 739
           Y    G K   R G ++F+D   +E      GF+ + RT       R+ +    +     
Sbjct: 79  YLHSQG-KSSYRMGINQFADMEVKEFASVVNGFRMNNRT-----KVRDHLHSHYISPAIP 132

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
             +P   DWRK+    P  DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  L++C+ 
Sbjct: 133 VSLPAEVDWRKEGYVTPIKDQGHCGSCWSFSTTGALEGQHFRKTGKLVSLSEQNLIDCST 192

Query: 800 Q--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFL 855
               +GC+G   + + +Y     G ++E  YPY+ A+G    C + K  V    TG   L
Sbjct: 193 SYGNNGCNGGVMDYAFQYIKDNDGDDTEDSYPYEAADG---PCRFKKEYVGATDTGYTDL 249

Query: 856 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 915
                E MK+ +   GP+SV +++             ++  C P  L H VL+VGYG + 
Sbjct: 250 PKGDEEKMKEAVAMVGPVSVAIDASHTSFQMYQSGVYDEVECDPEGLDHGVLVVGYGTEL 309

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
              YWLV+NSWG    DEG+ K+ R  NN CGI  +A Y  +
Sbjct: 310 GQDYWLVKNSWGTKWGDEGYIKMSRNKNNQCGISSMASYPLV 351



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 155/343 (45%), Gaps = 29/343 (8%)

Query: 268 VVARVDTLAIEGSLTFDNENILETF-KAFIVKRGRQYANDEEIK------------ERFE 314
           +V   + L  +  L F N+   E   + F     R Y   EE++            E   
Sbjct: 19  MVPMTNILRPDTILRFPNQVPFEKLWQDFKTVHERNYGETEEMQRKEVFRNNLKKIEMHN 78

Query: 315 YFKQDGHKKHERYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKD 373
           Y    G K   R G ++F+D   +E      GF+ + RT       R+ +    +     
Sbjct: 79  YLHSQG-KSSYRMGINQFADMEVKEFASVVNGFRMNNRT-----KVRDHLHSHYISPAIP 132

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
             +P   DWRK+    P  DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  L++C+ 
Sbjct: 133 VSLPAEVDWRKEGYVTPIKDQGHCGSCWSFSTTGALEGQHFRKTGKLVSLSEQNLIDCST 192

Query: 434 QCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDF 489
              G  GC+G  ++   +Y     G ++E  YPY   +G    C + K  V    TG   
Sbjct: 193 SY-GNNGCNGGVMDYAFQYIKDNDGDDTEDSYPYEAADG---PCRFKKEYVGATDTGYTD 248

Query: 490 LYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           L     E MK+ +   GP+SV +++    F        ++  C P  L H VL+VGYG +
Sbjct: 249 LPKGDEEKMKEAVAMVGPVSVAIDASHTSFQMYQSGVYDEVECDPEGLDHGVLVVGYGTE 308

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
               YWL +NSWG    DEG+ K+ R  NN CGI  +A Y  +
Sbjct: 309 LGQDYWLVKNSWGTKWGDEGYIKMSRNKNNQCGISSMASYPLV 351



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 116/220 (52%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P   DWRK+    P  DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  L++C+   
Sbjct: 135 LPAEVDWRKEGYVTPIKDQGHCGSCWSFSTTGALEGQHFRKTGKLVSLSEQNLIDCSTSY 194

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHF 126
             +GC+G   + + +Y     G ++E  YPY+ A+G    C + K  V    TG   L  
Sbjct: 195 GNNGCNGGVMDYAFQYIKDNDGDDTEDSYPYEAADG---PCRFKKEYVGATDTGYTDLPK 251

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
              E MK+ +   GP+SV +++             ++  C P  L H VL+VGYG +   
Sbjct: 252 GDEEKMKEAVAMVGPVSVAIDASHTSFQMYQSGVYDEVECDPEGLDHGVLVVGYGTELGQ 311

Query: 187 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            YWLV+NSWG    DEG+ K+ R  NN CGI  +A Y  +
Sbjct: 312 DYWLVKNSWGTKWGDEGYIKMSRNKNNQCGISSMASYPLV 351



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V ++  C P  L H VL+VGYG +    YWLV+NSWG    DEG+ K+ R  NN CGI  
Sbjct: 285  VYDEVECDPEGLDHGVLVVGYGTELGQDYWLVKNSWGTKWGDEGYIKMSRNKNNQCGISS 344

Query: 1018 IAGYATI 1024
            +A Y  +
Sbjct: 345  MASYPLV 351


>gi|211909240|gb|ACJ12893.1| cathepsin L1D [Fasciola hepatica]
          Length = 326

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 114/216 (52%), Gaps = 12/216 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + EY  Q GLE+E  YPY+   G+   C Y++   V   TG   LH  
Sbjct: 168 GNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNRQLGVAKVTGYYTLHSG 224

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++   GP +V ++  SD +   +G       +TCSP  L HAVL VGYG Q  
Sbjct: 225 NEAGLKSLVGSEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLGLNHAVLAVGYGTQGG 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 113/216 (52%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + EY  Q GLE+E  YPY+   G+   C Y++   V   TG   LH  
Sbjct: 168 GNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNRQLGVAKVTGYYTLHSG 224

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++   GP +V ++  SD +   +G       +TCSP  L HAVL VGYG Q  
Sbjct: 225 NEAGLKSLVGSEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLGLNHAVLAVGYGTQGG 281

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 112/217 (51%), Gaps = 13/217 (5%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC G  +E   EY  Q GLE+E  YPYR   G+   C Y++   V   TG   L+ 
Sbjct: 168 -GNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNRQLGVAKVTGYYTLHS 223

Query: 493 NGSETMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                +K ++   GP +V ++  S  + + +G       +TCSP  L HAVL VGYG Q 
Sbjct: 224 GNEAGLKSLVGSEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLGLNHAVLAVGYGTQG 280

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
              YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 281 GTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 17/102 (16%)

Query: 934  GFFKIERGNNACGIEQIAGY-----ATIDV----------VKNDETCSPYDLGHAVLLVG 978
            G++ +  GN A G++ + G        +DV          +   +TCSP  L HAVL VG
Sbjct: 217  GYYTLHSGNEA-GLKSLVGSEGPAAVAVDVESDFMMYRSGIYQSQTCSPLGLNHAVLAVG 275

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 1019
            YG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 276  YGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317


>gi|211909242|gb|ACJ12894.1| cathepsin L1D [Fasciola hepatica]
          Length = 326

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 114/216 (52%), Gaps = 12/216 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + EY  Q GLE+E  YPY+   G+   C Y++   V   TG   LH  
Sbjct: 168 GNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNRQLGVAKVTGYYTLHSG 224

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++   GP +V ++  SD +   +G       +TCSP  L HAVL VGYG Q  
Sbjct: 225 NEAGLKSLVGSEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLGLNHAVLAVGYGTQGG 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 113/216 (52%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + EY  Q GLE+E  YPY+   G+   C Y++   V   TG   LH  
Sbjct: 168 GNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNRQLGVAKVTGYYTLHSG 224

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++   GP +V ++  SD +   +G       +TCSP  L HAVL VGYG Q  
Sbjct: 225 NEAGLKSLVGSEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLGLNHAVLAVGYGTQGG 281

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 112/217 (51%), Gaps = 13/217 (5%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC G  +E   EY  Q GLE+E  YPYR   G+   C Y++   V   TG   L+ 
Sbjct: 168 -GNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNRQLGVAKVTGYYTLHS 223

Query: 493 NGSETMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                +K ++   GP +V ++  S  + + +G       +TCSP  L HAVL VGYG Q 
Sbjct: 224 GNEAGLKSLVGSEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLGLNHAVLAVGYGTQG 280

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
              YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 281 GTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 17/102 (16%)

Query: 934  GFFKIERGNNACGIEQIAGY-----ATIDV----------VKNDETCSPYDLGHAVLLVG 978
            G++ +  GN A G++ + G        +DV          +   +TCSP  L HAVL VG
Sbjct: 217  GYYTLHSGNEA-GLKSLVGSEGPAAVAVDVESDFMMYRSGIYQSQTCSPLGLNHAVLAVG 275

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 1019
            YG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 276  YGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317


>gi|318816588|ref|NP_001187996.1| cathepsin L precursor [Ictalurus punctatus]
 gi|308324547|gb|ADO29408.1| cathepsin L [Ictalurus punctatus]
          Length = 334

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 167/342 (48%), Gaps = 32/342 (9%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQ--------- 684
           V+  +  LA   S++ ++   LE F ++ +K G+ Y + EE  +R   + +         
Sbjct: 6   VITALVALASATSISLED---LE-FHSWKLKFGKIYKSVEEESQRKNTWLENRKLVLVHN 61

Query: 685 ---DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 741
              D   K  R G + F+D   +E   ++ FK    ++ R    R         ++  G 
Sbjct: 62  MLADQGIKSYRLGMTYFADMDNQEYR-QSVFKGCLGSFNRTKGHRAST----FLLQAGGA 116

Query: 742 V-PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
           V PD  DWR K       DQ  CGSCWAFS  G LEGQ   KTGKLV  S+ QLV+C+ +
Sbjct: 117 VLPDTVDWRDKGYVAEVKDQKNCGSCWAFSATGSLEGQTFRKTGKLVSLSEQQLVDCSGK 176

Query: 801 CS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLH 856
               GC G   + + EY     G+++E+ YPY+  +G+   C +  + V    TG   ++
Sbjct: 177 YGNMGCGGGLMDLAFEYIEDNKGIDTEESYPYEATDGD---CRFKPATVGATCTGYVDIN 233

Query: 857 FNGSETMKKILYKYGPLSVLLNSDLIH-DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 915
                 ++K +   GP+SV +++  I     G+ I  N+  CS  DL H VL VGYG  +
Sbjct: 234 SEDENALQKAVANIGPISVAIDAGHISFQLYGSGIY-NEPNCSSEDLDHGVLAVGYGTDN 292

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
              YWLV+NSWG    D+G+ K+ R  NN CGI   A Y  +
Sbjct: 293 QQDYWLVKNSWGLDWGDQGYIKMTRNKNNQCGIATAASYPLV 334



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 120/221 (54%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD  DWR K       DQ +CGSCWAFS  G LEGQ   KTGKLV  S+ QLV+C+ + 
Sbjct: 118 LPDTVDWRDKGYVAEVKDQKNCGSCWAFSATGSLEGQTFRKTGKLVSLSEQQLVDCSGKY 177

Query: 71  S--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHF 126
              GC G   + + EY     G+++E+ YPY+  +G+   C +  + V    TG   ++ 
Sbjct: 178 GNMGCGGGLMDLAFEYIEDNKGIDTEESYPYEATDGD---CRFKPATVGATCTGYVDINS 234

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIH-DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
                ++K +   GP+SV +++  I     G+ I  N+  CS  DL H VL VGYG  + 
Sbjct: 235 EDENALQKAVANIGPISVAIDAGHISFQLYGSGIY-NEPNCSSEDLDHGVLAVGYGTDNQ 293

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWLV+NSWG    D+G+ K+ R  NN CGI   A Y  +
Sbjct: 294 QDYWLVKNSWGLDWGDQGYIKMTRNKNNQCGIATAASYPLV 334



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 163/342 (47%), Gaps = 31/342 (9%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQ--------- 318
           V+  +  LA   S++ ++   LE F ++ +K G+ Y + EE  +R   + +         
Sbjct: 6   VITALVALASATSISLED---LE-FHSWKLKFGKIYKSVEEESQRKNTWLENRKLVLVHN 61

Query: 319 ---DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 375
              D   K  R G + F+D   +E   ++ FK    ++ R    R         ++  G 
Sbjct: 62  MLADQGIKSYRLGMTYFADMDNQEYR-QSVFKGCLGSFNRTKGHRAST----FLLQAGGA 116

Query: 376 V-PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
           V PD  DWR K       DQ  CGSCWAFS  G LEGQ   KTGKLV  S+ QLV+C+ +
Sbjct: 117 VLPDTVDWRDKGYVAEVKDQKNCGSCWAFSATGSLEGQTFRKTGKLVSLSEQQLVDCSGK 176

Query: 435 CS--GCGGCDGLEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFL 490
               GCGG   ++   EY     G+++E+ YPY   +G+   C +  + V    TG   +
Sbjct: 177 YGNMGCGG-GLMDLAFEYIEDNKGIDTEESYPYEATDGD---CRFKPATVGATCTGYVDI 232

Query: 491 YFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                  ++K +   GP+SV +++  I F        N+  CS  DL H VL VGYG  +
Sbjct: 233 NSEDENALQKAVANIGPISVAIDAGHISFQLYGSGIYNEPNCSSEDLDHGVLAVGYGTDN 292

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
              YWL +NSWG    D+G+ K+ R  NN CGI   A Y  +
Sbjct: 293 QQDYWLVKNSWGLDWGDQGYIKMTRNKNNQCGIATAASYPLV 334



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            + N+  CS  DL H VL VGYG  +   YWLV+NSWG    D+G+ K+ R  NN CGI  
Sbjct: 268  IYNEPNCSSEDLDHGVLAVGYGTDNQQDYWLVKNSWGLDWGDQGYIKMTRNKNNQCGIAT 327

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 328  AASYPLV 334


>gi|256077195|ref|XP_002574893.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230782|emb|CCD77199.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 456

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 148/318 (46%), Gaps = 28/318 (8%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRSP 337
           N+ E +  F +K  +QY   +EI  RF  FK +  K       ER    YG + +SD + 
Sbjct: 153 NVDEKYVQFKLKYRKQYHETDEI--RFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 210

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 211 DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 263

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG---CDGLEQPIEYTHQA 454
           GSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC G    +  E  I+     
Sbjct: 264 GSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGLPSNAYESIIK---MG 320

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E +YPY   N    KC      V ++             +   LY    +SVG+N+
Sbjct: 321 GLMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNA 377

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIPYWLARNSWGPIGPDEGFFKI 573
            L+ FY           CS Y L HAVLLVGYG  + + P+W+ +NSWG    + G+F++
Sbjct: 378 LLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRM 437

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+  CGI  +A  A I
Sbjct: 438 YRGDGTCGINTVATSALI 455



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 147/317 (46%), Gaps = 27/317 (8%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRSP 703
           N+ E +  F +K  +QY   +EI  RF  FK +  K       ER    YG + +SD + 
Sbjct: 153 NVDEKYVQFKLKYRKQYHETDEI--RFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 210

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 211 DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 263

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC+G    PS  Y       G
Sbjct: 264 GSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGL--PSNAYESIIKMGG 321

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           L  E +YPY   N    KC      V ++             +   LY    +SV +N+ 
Sbjct: 322 LMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNAL 378

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           L+  Y           CS Y L HAVLLVGYG  + N P+W+V+NSWG    + G+F++ 
Sbjct: 379 LLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMY 438

Query: 940 RGNNACGIEQIAGYATI 956
           RG+  CGI  +A  A I
Sbjct: 439 RGDGTCGINTVATSALI 455



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 109/219 (49%), Gaps = 9/219 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K       +Q  CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C    
Sbjct: 242 IPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLD 301

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC+G    PS  Y       GL  E +YPY   N    KC      V ++         
Sbjct: 302 DGCNGGL--PSNAYESIIKMGGLMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLTQ 356

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNI 186
               +   LY    +SV +N+ L+  Y           CS Y L HAVLLVGYG  + N 
Sbjct: 357 DETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNE 416

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           P+W+V+NSWG    + G+F++ RG+  CGI  +A  A I
Sbjct: 417 PFWIVKNSWGVEWGENGYFRMYRGDGTCGINTVATSALI 455


>gi|168047065|ref|XP_001775992.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672650|gb|EDQ59184.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 336

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 151/315 (47%), Gaps = 31/315 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHER---YGTSEFSDRSPEEILCK 709
           F  F  K  ++Y   EE+K RF  F +     + H K +       +EF+D + EE    
Sbjct: 29  FAGFAAKYKKEYKTVEELKHRFVTFLESVKLVETHNKGQHSYSLAVNEFADMTFEEF--- 85

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                  R    +  ++     +   V     +P   DWR++ +     +QA+CGSCW F
Sbjct: 86  -------RDSRLMKGEQNCSATVGNHVLTGESLPKTKDWREEGIVSQVKNQASCGSCWTF 138

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKD 826
           S  G LE  +A  TGK+V  S+ QLV+CA + +  GC G     + EY  +  G+++E  
Sbjct: 139 STTGALEAAHAQATGKMVLLSEQQLVDCAGEFNNFGCGGGLPSQAFEYIRYNGGIDTEDS 198

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHD- 884
           YPY   N +  +C + K+ +            G+ET +K  +    P+SV    +++HD 
Sbjct: 199 YPY---NAKDSQCRFHKNTIGAQVWDVVNITEGAETQLKHAIATMRPVSVAF--EVVHDF 253

Query: 885 --YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIERG 941
             YNG      +    P  + HAVL VGYG+ +N +PYW+++NSWG      G+F +E G
Sbjct: 254 RLYNGGVYTSLNCHTGPQTVNHAVLAVGYGEDENGVPYWIIKNSWGADWGMNGYFNMEMG 313

Query: 942 NNACGIEQIAGYATI 956
            N CG+   A Y  +
Sbjct: 314 KNMCGVATCASYPVV 328



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 149/315 (47%), Gaps = 30/315 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHER---YGTSEFSDRSPEEILCK 343
           F  F  K  ++Y   EE+K RF  F +     + H K +       +EF+D + EE    
Sbjct: 29  FAGFAAKYKKEYKTVEELKHRFVTFLESVKLVETHNKGQHSYSLAVNEFADMTFEEF--- 85

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                  R    +  ++     +   V     +P   DWR++ +     +QA+CGSCW F
Sbjct: 86  -------RDSRLMKGEQNCSATVGNHVLTGESLPKTKDWREEGIVSQVKNQASCGSCWTF 138

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGGCDGL-EQPIEYT-HQAGLESE 459
           S  G LE  +A  TGK+V  S+ QLV+CA + +  GCGG  GL  Q  EY  +  G+++E
Sbjct: 139 STTGALEAAHAQATGKMVLLSEQQLVDCAGEFNNFGCGG--GLPSQAFEYIRYNGGIDTE 196

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLN-SHLI 517
             YPY   N +  +C + K+ +            G+ET +K  +    P+SV     H  
Sbjct: 197 DSYPY---NAKDSQCRFHKNTIGAQVWDVVNITEGAETQLKHAIATMRPVSVAFEVVHDF 253

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEGFFKIERG 576
             YNG      +    P  + HAVL VGYG+ ++ +PYW+ +NSWG      G+F +E G
Sbjct: 254 RLYNGGVYTSLNCHTGPQTVNHAVLAVGYGEDENGVPYWIIKNSWGADWGMNGYFNMEMG 313

Query: 577 NNACGIEQIAGYATI 591
            N CG+   A Y  +
Sbjct: 314 KNMCGVATCASYPVV 328



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 118/223 (52%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P   DWR++ +     +QA CGSCW FS  G LE  +A  TGK+V  S+ QLV+CA + 
Sbjct: 111 LPKTKDWREEGIVSQVKNQASCGSCWTFSTTGALEAAHAQATGKMVLLSEQQLVDCAGEF 170

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +  GC G     + EY  +  G+++E  YPY   N +  +C + K+ +            
Sbjct: 171 NNFGCGGGLPSQAFEYIRYNGGIDTEDSYPY---NAKDSQCRFHKNTIGAQVWDVVNITE 227

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           G+ET +K  +    P+SV    +++HD   YNG      +    P  + HAVL VGYG+ 
Sbjct: 228 GAETQLKHAIATMRPVSVAF--EVVHDFRLYNGGVYTSLNCHTGPQTVNHAVLAVGYGED 285

Query: 184 DN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +N +PYW+++NSWG      G+F +E G N CG+   A Y  +
Sbjct: 286 ENGVPYWIIKNSWGADWGMNGYFNMEMGKNMCGVATCASYPVV 328



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 967  PYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            P  + HAVL VGYG+ ++ +PYW+++NSWG      G+F +E G N CG+   A Y  +
Sbjct: 270  PQTVNHAVLAVGYGEDENGVPYWIIKNSWGADWGMNGYFNMEMGKNMCGVATCASYPVV 328


>gi|348505824|ref|XP_003440460.1| PREDICTED: pro-cathepsin H-like [Oreochromis niloticus]
          Length = 324

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 157/316 (49%), Gaps = 34/316 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 709
           FK+++ +  ++Y N +E  +R + F ++  +  KH         G +EFSD +  E   +
Sbjct: 26  FKSWMAQYNKEY-NLKEYYQRLQIFTENKKRIDKHNEGNHSFTMGLNEFSDMTFSEF--R 82

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             F  SE   +   A +            +G +PD+ DWRKK N   P  +Q  CGSCW 
Sbjct: 83  KSFLMSEP--QNCSATKGNY------FSSNGLLPDSIDWRKKGNYVTPVKNQGGCGSCWT 134

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEY-THQAGLESEK 825
           FS  G LE   AI  GKLV  S+ QLV+CA+  +  GC+G     + EY  +  GL +E+
Sbjct: 135 FSTTGCLESVTAINKGKLVPLSEQQLVDCAQDFNNHGCNGGLPSQAFEYIMYNKGLMTEQ 194

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGK--DFLHFNGSETMKKILYKYGPLSVL--LNSDL 881
           DYPY    G   KC Y   K   F     +   +N  E M   +  + P+S    + SD 
Sbjct: 195 DYPYTAFEG---KCVYKPGKAAAFVNSVVNITAYNELE-MVDAVGTHNPVSFAFEVTSDF 250

Query: 882 IHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
           +  + G  +  + E  +  D + HAVL VGYG+++  PYW+V+NSWG      G+F IER
Sbjct: 251 MSYHQG--VYTSTECHNTTDKVNHAVLAVGYGQENGTPYWIVKNSWGSSWGMNGYFLIER 308

Query: 941 GNNACGIEQIAGYATI 956
           G N CG+   A +  +
Sbjct: 309 GKNMCGLAACASFPVV 324



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 155/316 (49%), Gaps = 33/316 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 343
           FK+++ +  ++Y N +E  +R + F ++  +  KH         G +EFSD +  E   +
Sbjct: 26  FKSWMAQYNKEY-NLKEYYQRLQIFTENKKRIDKHNEGNHSFTMGLNEFSDMTFSEF--R 82

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             F  SE   +   A +            +G +PD+ DWRKK N   P  +Q  CGSCW 
Sbjct: 83  KSFLMSEP--QNCSATKGNY------FSSNGLLPDSIDWRKKGNYVTPVKNQGGCGSCWT 134

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEY-THQAGLESEK 460
           FS  G LE   AI  GKLV  S+ QLV+CA+  +  G   GL  Q  EY  +  GL +E+
Sbjct: 135 FSTTGCLESVTAINKGKLVPLSEQQLVDCAQDFNNHGCNGGLPSQAFEYIMYNKGLMTEQ 194

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGK--DFLYFNGSETMKKILYKYGPLSVG--LNSHL 516
           DYPY    G   KC Y   K   F     +   +N  E M   +  + P+S    + S  
Sbjct: 195 DYPYTAFEG---KCVYKPGKAAAFVNSVVNITAYNELE-MVDAVGTHNPVSFAFEVTSDF 250

Query: 517 IHFYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
           + ++ G  +  + E  +  D + HAVL VGYG+++  PYW+ +NSWG      G+F IER
Sbjct: 251 MSYHQG--VYTSTECHNTTDKVNHAVLAVGYGQENGTPYWIVKNSWGSSWGMNGYFLIER 308

Query: 576 GNNACGIEQIAGYATI 591
           G N CG+   A +  +
Sbjct: 309 GKNMCGLAACASFPVV 324



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 121/227 (53%), Gaps = 15/227 (6%)

Query: 8   DGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +G +PD+ DWRKK N   P  +Q  CGSCW FS  G LE   AI  GKLV  S+ QLV+C
Sbjct: 104 NGLLPDSIDWRKKGNYVTPVKNQGGCGSCWTFSTTGCLESVTAINKGKLVPLSEQQLVDC 163

Query: 67  AKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK-- 121
           A+  +  GC+G     + EY  +  GL +E+DYPY    G   KC Y   K   F     
Sbjct: 164 AQDFNNHGCNGGLPSQAFEYIMYNKGLMTEQDYPYTAFEG---KCVYKPGKAAAFVNSVV 220

Query: 122 DFLHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLV 178
           +   +N  E M   +  + P+S    + SD +  + G  +  + E  +  D + HAVL V
Sbjct: 221 NITAYNELE-MVDAVGTHNPVSFAFEVTSDFMSYHQG--VYTSTECHNTTDKVNHAVLAV 277

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           GYG+++  PYW+V+NSWG      G+F IERG N CG+   A +  +
Sbjct: 278 GYGQENGTPYWIVKNSWGSSWGMNGYFLIERGKNMCGLAACASFPVV 324



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            + HAVL VGYG+++  PYW+V+NSWG      G+F IERG N CG+   A +  +
Sbjct: 270  VNHAVLAVGYGQENGTPYWIVKNSWGSSWGMNGYFLIERGKNMCGLAACASFPVV 324


>gi|7242888|dbj|BAA92495.1| cysteine protease [Vigna mungo]
          Length = 364

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 147/327 (44%), Gaps = 48/327 (14%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 704
           N    F  F  K G+ YA  EE   RF  FK +  +   H +      +G ++FSD +  
Sbjct: 45  NAEHHFSNFKAKFGKTYATKEEHDHRFGVFKSNLRRARLHAQLDPSAVHGVTKFSDLTAA 104

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E          +R +  +             +     +P  +DWR K       DQ ACG
Sbjct: 105 EF---------QRQFLGLKPLGLPANAQKAPILPTNNLPKDFDWRDKGAVTNVKDQGACG 155

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCW+FS  G LEG + + TG+LV  S+ QLV+C   C         SGC+G     + EY
Sbjct: 156 SCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEY 215

Query: 816 THQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
              A G++ E+DYPY    G    C +DKSK+        +     + +   L K GPL+
Sbjct: 216 ILGAGGVQREEDYPYA---GRDSSCKFDKSKIAASVANYSVISLDEDQIAANLVKNGPLA 272

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DNIPYWLVR 923
           V +N+  +  Y G           PY     L H V +VGYG+           PYW+++
Sbjct: 273 VGINAVYMQTYIGG-------VSCPYICAKRLDHGVQIVGYGESGYAPIRFKEKPYWIIK 325

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQI 950
           NSWG    + G++KI RG NACG++ +
Sbjct: 326 NSWGESWGENGYYKICRGQNACGVDSM 352



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 148/327 (45%), Gaps = 47/327 (14%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 338
           N    F  F  K G+ YA  EE   RF  FK +  +   H +      +G ++FSD +  
Sbjct: 45  NAEHHFSNFKAKFGKTYATKEEHDHRFGVFKSNLRRARLHAQLDPSAVHGVTKFSDLTAA 104

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E          +R +  +             +     +P  +DWR K       DQ ACG
Sbjct: 105 EF---------QRQFLGLKPLGLPANAQKAPILPTNNLPKDFDWRDKGAVTNVKDQGACG 155

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEY 450
           SCW+FS  G LEG + + TG+LV  S+ QLV+C   C       C  GC+G  +    EY
Sbjct: 156 SCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEY 215

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
              A G++ E+DYPY    G    C +DKSK+        +     + +   L K GPL+
Sbjct: 216 ILGAGGVQREEDYPYA---GRDSSCKFDKSKIAASVANYSVISLDEDQIAANLVKNGPLA 272

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DDIPYWLAR 558
           VG+N+  +  Y G           PY     L H V +VGYG+         + PYW+ +
Sbjct: 273 VGINAVYMQTYIGG-------VSCPYICAKRLDHGVQIVGYGESGYAPIRFKEKPYWIIK 325

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQI 585
           NSWG    + G++KI RG NACG++ +
Sbjct: 326 NSWGESWGENGYYKICRGQNACGVDSM 352



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 114/230 (49%), Gaps = 31/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K       DQ  CGSCW+FS  G LEG + + TG+LV  S+ QLV+C   C
Sbjct: 133 LPKDFDWRDKGAVTNVKDQGACGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVC 192

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY   A G++ E+DYPY    G    C +DKSK+     
Sbjct: 193 DPEEYGACDSGCNGGLMNNAFEYILGAGGVQREEDYPYA---GRDSSCKFDKSKIAASVA 249

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y G           PY     L H V 
Sbjct: 250 NYSVISLDEDQIAANLVKNGPLAVGINAVYMQTYIGG-------VSCPYICAKRLDHGVQ 302

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           +VGYG+           PYW+++NSWG    + G++KI RG NACG++ +
Sbjct: 303 IVGYGESGYAPIRFKEKPYWIIKNSWGESWGENGYYKICRGQNACGVDSM 352



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLV 990
            ++ G  A GI  +     I  V     C+   L H V +VGYG+         + PYW++
Sbjct: 266  VKNGPLAVGINAVYMQTYIGGVSCPYICAK-RLDHGVQIVGYGESGYAPIRFKEKPYWII 324

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    + G++KI RG NACG++ +
Sbjct: 325  KNSWGESWGENGYYKICRGQNACGVDSM 352


>gi|194352748|emb|CAQ00102.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 368

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 141/328 (42%), Gaps = 40/328 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 709
           F AF+ + G++Y+  EE   R   F                 R+G + FSD + EE   +
Sbjct: 50  FAAFVRRHGKEYSGPEEYARRLRVFAANVARAAAHQALDPGARHGVTPFSDLTREEFEAR 109

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
            TG   +                   EV     +P ++DWR K        Q  CGSCWA
Sbjct: 110 LTGLVGAGDVLRSARRMPAAAPATEEEVAA---LPASFDWRDKGAVTDVKMQGVCGSCWA 166

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY-THQ 818
           FS  G +EG   + TGKL++ S+ QLV+C   C         SGC G     +  Y    
Sbjct: 167 FSTTGAVEGANFVATGKLLDLSEQQLVDCDHTCDAVAKTECNSGCSGGLMTNAYRYLMSS 226

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
            GL  +  YPY  A G    C +D+ KV +            + M+  L + GPL+V LN
Sbjct: 227 GGLMEQAAYPYTGAQG---PCRFDRGKVAVRVANFTAVPLDEDQMRAALVRGGPLAVGLN 283

Query: 879 SDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGP 928
           +  +  Y G    P+      C    + H VLLVGYG +          PYWL++NSWG 
Sbjct: 284 AAFMQTYVGGVSCPL-----ICPRAMVNHGVLLVGYGARGFSALRLGYRPYWLIKNSWGA 338

Query: 929 IGPDEGFFKIERGNNACGIEQIAGYATI 956
              + G++K+ RG N CG++ +     +
Sbjct: 339 QWGEGGYYKLCRGRNVCGVDSMVSAVAV 366



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 140/328 (42%), Gaps = 39/328 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 343
           F AF+ + G++Y+  EE   R   F                 R+G + FSD + EE   +
Sbjct: 50  FAAFVRRHGKEYSGPEEYARRLRVFAANVARAAAHQALDPGARHGVTPFSDLTREEFEAR 109

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
            TG   +                   EV     +P ++DWR K        Q  CGSCWA
Sbjct: 110 LTGLVGAGDVLRSARRMPAAAPATEEEVAA---LPASFDWRDKGAVTDVKMQGVCGSCWA 166

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCG------GCDGLEQPIEYTH---Q 453
           FS  G +EG   + TGKL++ S+ QLV+C   C          GC G      Y +    
Sbjct: 167 FSTTGAVEGANFVATGKLLDLSEQQLVDCDHTCDAVAKTECNSGCSGGLMTNAYRYLMSS 226

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
            GL  +  YPY    G +  C +D+ KV +            + M+  L + GPL+VGLN
Sbjct: 227 GGLMEQAAYPY---TGAQGPCRFDRGKVAVRVANFTAVPLDEDQMRAALVRGGPLAVGLN 283

Query: 514 SHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLARNSWGP 563
           +  +  Y G    P+      C    + H VLLVGYG +          PYWL +NSWG 
Sbjct: 284 AAFMQTYVGGVSCPL-----ICPRAMVNHGVLLVGYGARGFSALRLGYRPYWLIKNSWGA 338

Query: 564 IGPDEGFFKIERGNNACGIEQIAGYATI 591
              + G++K+ RG N CG++ +     +
Sbjct: 339 QWGEGGYYKLCRGRNVCGVDSMVSAVAV 366



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 113/240 (47%), Gaps = 28/240 (11%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           E+   +P ++DWR K        Q  CGSCWAFS  G +EG   + TGKL++ S+ QLV+
Sbjct: 135 EEVAALPASFDWRDKGAVTDVKMQGVCGSCWAFSTTGAVEGANFVATGKLLDLSEQQLVD 194

Query: 66  CAKQC---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKV 115
           C   C         SGC G     +  Y     GL  +  YPY  A G    C +D+ KV
Sbjct: 195 CDHTCDAVAKTECNSGCSGGLMTNAYRYLMSSGGLMEQAAYPYTGAQG---PCRFDRGKV 251

Query: 116 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLG 172
            +            + M+  L + GPL+V LN+  +  Y G    P+      C    + 
Sbjct: 252 AVRVANFTAVPLDEDQMRAALVRGGPLAVGLNAAFMQTYVGGVSCPL-----ICPRAMVN 306

Query: 173 HAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           H VLLVGYG +          PYWL++NSWG    + G++K+ RG N CG++ +     +
Sbjct: 307 HGVLLVGYGARGFSALRLGYRPYWLIKNSWGAQWGEGGYYKLCRGRNVCGVDSMVSAVAV 366


>gi|3097321|dbj|BAA25899.1| Bd 30K [Glycine max]
 gi|84371705|gb|ABC56139.1| 34 kDa maturing seed protein [Glycine max]
 gi|195957142|gb|ACG59282.1| major allergen Gly m Bd 30K [Glycine max]
 gi|223452512|gb|ACM89583.1| maturing seed protein [Glycine max]
 gi|226432468|gb|ACO55749.1| Gly m Bd 30K allergen [Glycine max]
 gi|320090153|gb|ADW08728.1| P34 allergen [Glycine max]
 gi|320090155|gb|ADW08729.1| P34 allergen [Glycine max]
 gi|320090157|gb|ADW08730.1| P34 allergen [Glycine max]
 gi|320090159|gb|ADW08731.1| P34 allergen [Glycine max]
          Length = 379

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 163/323 (50%), Gaps = 34/323 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKH---ERYGTSEFSDRSPEEI 340
           F+ +  + GR Y N EE  +R E FK +         ++K     R G ++F+D +P+E 
Sbjct: 44  FQLWKSEHGRVYHNHEEEAKRLEIFKNNLNYIRDMNANRKSPHSHRLGLNKFADITPQE- 102

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
             K   +  +   ++I    +K++K   +   D P P +WDWRKK V      Q  CGS 
Sbjct: 103 FSKKYLQAPKDVSQQIKMANKKMKKE--QYSCDHP-PASWDWRKKGVITQVKYQGGCGSG 159

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE-QPIEYT-HQAGLES 458
           WAFS  G +E  +AI TG LV  S+ +LV+C ++  GC   +G   Q  E+     G+ +
Sbjct: 160 WAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESEGC--YNGWHYQSFEWVLEHGGIAT 217

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNG----SETMKKILYKY--GPLSVG 511
           + DYPYR   G   +C  +K + K+   G + L  +     SET +  L      P+SV 
Sbjct: 218 DDDYPYRAKEG---RCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVS 274

Query: 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           +++   H Y G  I   +   SPY + H VLLVGYG  D + YW+A+NSWG    ++G+ 
Sbjct: 275 IDAKDFHLYTGG-IYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGEDWGEDGYI 333

Query: 572 KIER--GN--NACGIEQIAGYAT 590
            I+R  GN    CG+   A Y T
Sbjct: 334 WIQRNTGNLLGVCGMNYFASYPT 356



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/321 (33%), Positives = 161/321 (50%), Gaps = 31/321 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKH---ERYGTSEFSDRSPEEI 706
           F+ +  + GR Y N EE  +R E FK +         ++K     R G ++F+D +P+E 
Sbjct: 44  FQLWKSEHGRVYHNHEEEAKRLEIFKNNLNYIRDMNANRKSPHSHRLGLNKFADITPQE- 102

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
             K   +  +   ++I    +K++K   +   D P P +WDWRKK V      Q  CGS 
Sbjct: 103 FSKKYLQAPKDVSQQIKMANKKMKKE--QYSCDHP-PASWDWRKKGVITQVKYQGGCGSG 159

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEK 825
           WAFS  G +E  +AI TG LV  S+ +LV+C ++  GC   +   S E+     G+ ++ 
Sbjct: 160 WAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESEGCYNGWHYQSFEWVLEHGGIATDD 219

Query: 826 DYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG----SETMKKILYKY--GPLSVLLN 878
           DYPY+   G   +C  +K + K+   G + L  +     SET +  L      P+SV ++
Sbjct: 220 DYPYRAKEG---RCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVSID 276

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +   H Y G  I   +   SPY + H VLLVGYG  D + YW+ +NSWG    ++G+  I
Sbjct: 277 AKDFHLYTGG-IYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGEDWGEDGYIWI 335

Query: 939 ER--GN--NACGIEQIAGYAT 955
           +R  GN    CG+   A Y T
Sbjct: 336 QRNTGNLLGVCGMNYFASYPT 356



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 119/229 (51%), Gaps = 17/229 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D P P +WDWRKK V      Q  CGS WAFS  G +E  +AI TG LV  S+ +LV+C 
Sbjct: 133 DHP-PASWDWRKKGVITQVKYQGGCGSGWAFSATGAIEAAHAIATGDLVSLSEQELVDCV 191

Query: 68  KQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLH 125
           ++  GC   +   S E+     G+ ++ DYPY+   G   +C  +K + K+   G + L 
Sbjct: 192 EESEGCYNGWHYQSFEWVLEHGGIATDDDYPYRAKEG---RCKANKIQDKVTIDGYETLI 248

Query: 126 FNG----SETMKKILYKY--GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
            +     SET +  L      P+SV +++   H Y G  I   +   SPY + H VLLVG
Sbjct: 249 MSDESTESETEQAFLSAILEQPISVSIDAKDFHLYTGG-IYDGENCTSPYGINHFVLLVG 307

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIER--GN--NACGIEQIAGYAT 224
           YG  D + YW+ +NSWG    ++G+  I+R  GN    CG+   A Y T
Sbjct: 308 YGSADGVDYWIAKNSWGEDWGEDGYIWIQRNTGNLLGVCGMNYFASYPT 356



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 5/70 (7%)

Query: 959  VKNDETC-SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER--GN--NAC 1013
            + + E C SPY + H VLLVGYG  D + YW+ +NSWG    ++G+  I+R  GN    C
Sbjct: 287  IYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGEDWGEDGYIWIQRNTGNLLGVC 346

Query: 1014 GIEQIAGYAT 1023
            G+   A Y T
Sbjct: 347  GMNYFASYPT 356


>gi|18414611|ref|NP_567489.1| Papain family cysteine protease [Arabidopsis thaliana]
 gi|2244977|emb|CAB10398.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|7268368|emb|CAB78661.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|14517442|gb|AAK62611.1| AT4g16190/dl4135w [Arabidopsis thaliana]
 gi|22136546|gb|AAM91059.1| AT4g16190/dl4135w [Arabidopsis thaliana]
 gi|22530956|gb|AAM96982.1| cysteine proteinase [Arabidopsis thaliana]
 gi|23397184|gb|AAN31875.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|110740834|dbj|BAE98514.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|332658313|gb|AEE83713.1| Papain family cysteine protease [Arabidopsis thaliana]
          Length = 373

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 172/379 (45%), Gaps = 57/379 (15%)

Query: 605 IMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAF 661
             LI A  L   + S +    ++  +TD  V  +  +  E     ++E +L     F  F
Sbjct: 7   FFLIAATLLAGSLGSTV----ISGEVTDGFVNPIRQVVPEE----NDEQLLNAEHHFTLF 58

Query: 662 IVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCKTGFK 713
             K  + YA   E   RF  FK +  +            +G ++FSD +P+E   +  F 
Sbjct: 59  KSKYEKTYATQVEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQFSDLTPKEF--RRKFL 116

Query: 714 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 773
             +R   R+  D +        +     +P  +DWR++    P  +Q  CGSCW+FS  G
Sbjct: 117 GLKRRGFRLPTDTQTAP-----ILPTSDLPTEFDWREQGAVTPVKNQGMCGSCWSFSAIG 171

Query: 774 MLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLES 823
            LEG + + T +LV  S+ QLV+C  +C         SGC G     + EY  +A GL  
Sbjct: 172 ALEGAHFLATKELVSLSEQQLVDCDHECDPAQANSCDSGCSGGLMNNAFEYALKAGGLMK 231

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 883
           E+DYPY     +   C +DKSK+        +  +  + +   L ++GPL++ +N+  + 
Sbjct: 232 EEDYPYTGR--DHTACKFDKSKIVASVSNFSVVSSDEDQIAANLVQHGPLAIAINAMWMQ 289

Query: 884 DYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPD 932
            Y G           PY       H VLLVG+G       +    PYW+++NSWG +  +
Sbjct: 290 TYIGG-------VSCPYVCSKSQDHGVLLVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGE 342

Query: 933 EGFFKIERG-NNACGIEQI 950
            G++KI RG +N CG++ +
Sbjct: 343 HGYYKICRGPHNMCGMDTM 361



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 173/379 (45%), Gaps = 56/379 (14%)

Query: 239 IMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAF 295
             LI A  L   + S +    ++  +TD  V  +  +  E     ++E +L     F  F
Sbjct: 7   FFLIAATLLAGSLGSTV----ISGEVTDGFVNPIRQVVPEE----NDEQLLNAEHHFTLF 58

Query: 296 IVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCKTGFK 347
             K  + YA   E   RF  FK +  +            +G ++FSD +P+E   +  F 
Sbjct: 59  KSKYEKTYATQVEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQFSDLTPKEF--RRKFL 116

Query: 348 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 407
             +R   R+  D +        +     +P  +DWR++    P  +Q  CGSCW+FS  G
Sbjct: 117 GLKRRGFRLPTDTQTAP-----ILPTSDLPTEFDWREQGAVTPVKNQGMCGSCWSFSAIG 171

Query: 408 MLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEYTHQA-GLES 458
            LEG + + T +LV  S+ QLV+C  +C     + C  GC G  +    EY  +A GL  
Sbjct: 172 ALEGAHFLATKELVSLSEQQLVDCDHECDPAQANSCDSGCSGGLMNNAFEYALKAGGLMK 231

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E+DYPY     +   C +DKSK+        +  +  + +   L ++GPL++ +N+  + 
Sbjct: 232 EEDYPYT--GRDHTACKFDKSKIVASVSNFSVVSSDEDQIAANLVQHGPLAIAINAMWMQ 289

Query: 519 FYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPD 567
            Y G           PY       H VLLVG+G       +  + PYW+ +NSWG +  +
Sbjct: 290 TYIGG-------VSCPYVCSKSQDHGVLLVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGE 342

Query: 568 EGFFKIERG-NNACGIEQI 585
            G++KI RG +N CG++ +
Sbjct: 343 HGYYKICRGPHNMCGMDTM 361



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 118/231 (51%), Gaps = 31/231 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR++    P  +Q  CGSCW+FS  G LEG + + T +LV  S+ QLV+C  +C
Sbjct: 140 LPTEFDWREQGAVTPVKNQGMCGSCWSFSAIGALEGAHFLATKELVSLSEQQLVDCDHEC 199

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC G     + EY  +A GL  E+DYPY     +   C +DKSK+     
Sbjct: 200 DPAQANSCDSGCSGGLMNNAFEYALKAGGLMKEEDYPYTGR--DHTACKFDKSKIVASVS 257

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +  +  + +   L ++GPL++ +N+  +  Y G           PY       H VL
Sbjct: 258 NFSVVSSDEDQIAANLVQHGPLAIAINAMWMQTYIGG-------VSCPYVCSKSQDHGVL 310

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQI 219
           LVG+G       +    PYW+++NSWG +  + G++KI RG +N CG++ +
Sbjct: 311 LVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTM 361



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 8/55 (14%)

Query: 972  HAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQI 1018
            H VLLVG+G       +  + PYW+++NSWG +  + G++KI RG +N CG++ +
Sbjct: 307  HGVLLVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTM 361


>gi|443698586|gb|ELT98517.1| hypothetical protein CAPTEDRAFT_128252 [Capitella teleta]
          Length = 324

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 164/349 (46%), Gaps = 35/349 (10%)

Query: 612 FLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYAN 671
            L C +A+ L  P + D   D++     T     S T+  E   E  + FI +R     N
Sbjct: 1   MLACCIAATLASPLVFDEALDEMWTLFKTTH---SKTYATE--AEDMRRFIWERHLNMIN 55

Query: 672 DEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK 731
              I+        D  K     G +E+ D +  E    +G+K ++ +      + E ++ 
Sbjct: 56  QHNIE-------ADLGKHTFSLGMNEYGDLTQHEYAAMSGYKMAKSSVGSSFLEPENLQ- 107

Query: 732 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 791
                     VP   DWR+K    P  +Q  CGSCWAFS  G LEGQ   KTG+L   S+
Sbjct: 108 ----------VPKTVDWREKGYVTPVKNQGQCGSCWAFSSTGSLEGQVFRKTGRLPSISE 157

Query: 792 SQLVECAKQ--CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL 848
             LV+C++     GC G   + +  Y  +  G++SEK YPY+  +GE   C Y KS   +
Sbjct: 158 QNLVDCSRDEGNMGCSGGLMDNAFTYIKKNMGIDSEKSYPYEAVDGE---CRYKKSD-SV 213

Query: 849 FTGKDFLHF-NGSET-MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHA 905
            T   F+   +G ET ++  +   GP+SV ++ S     +  T +   +  CS   L H 
Sbjct: 214 TTDSGFVDIPHGDETALRTAVASVGPVSVAIDASHTSFQFYKTGVY-TEANCSSTQLDHG 272

Query: 906 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGY 953
           VL+VGYG ++   YWLV+NSWG    + G+ K+ R + N CGI   A Y
Sbjct: 273 VLVVGYGVENGQDYWLVKNSWGASWGEAGYIKLARNHGNQCGIASQASY 321



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 161/349 (46%), Gaps = 34/349 (9%)

Query: 246 FLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYAN 305
            L C +A+ L  P + D   D++     T     S T+  E   E  + FI +R     N
Sbjct: 1   MLACCIAATLASPLVFDEALDEMWTLFKTTH---SKTYATE--AEDMRRFIWERHLNMIN 55

Query: 306 DEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK 365
              I+        D  K     G +E+ D +  E    +G+K ++ +      + E ++ 
Sbjct: 56  QHNIE-------ADLGKHTFSLGMNEYGDLTQHEYAAMSGYKMAKSSVGSSFLEPENLQ- 107

Query: 366 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 425
                     VP   DWR+K    P  +Q  CGSCWAFS  G LEGQ   KTG+L   S+
Sbjct: 108 ----------VPKTVDWREKGYVTPVKNQGQCGSCWAFSSTGSLEGQVFRKTGRLPSISE 157

Query: 426 SQLVECAKQCSGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVK 482
             LV+C++   G  GC G  ++    Y  +  G++SEK YPY   +GE   C Y KS   
Sbjct: 158 QNLVDCSRD-EGNMGCSGGLMDNAFTYIKKNMGIDSEKSYPYEAVDGE---CRYKKSD-S 212

Query: 483 LFTGKDFLYF-NGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHA 540
           + T   F+   +G ET ++  +   GP+SV +++    F         +  CS   L H 
Sbjct: 213 VTTDSGFVDIPHGDETALRTAVASVGPVSVAIDASHTSFQFYKTGVYTEANCSSTQLDHG 272

Query: 541 VLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGY 588
           VL+VGYG ++   YWL +NSWG    + G+ K+ R + N CGI   A Y
Sbjct: 273 VLVVGYGVENGQDYWLVKNSWGASWGEAGYIKLARNHGNQCGIASQASY 321



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 118/219 (53%), Gaps = 12/219 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           VP   DWR+K    P  +Q  CGSCWAFS  G LEGQ   KTG+L   S+  LV+C++  
Sbjct: 108 VPKTVDWREKGYVTPVKNQGQCGSCWAFSSTGSLEGQVFRKTGRLPSISEQNLVDCSRDE 167

Query: 70  -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
              GC G   + +  Y  +  G++SEK YPY+  +GE   C Y KS   + T   F+   
Sbjct: 168 GNMGCSGGLMDNAFTYIKKNMGIDSEKSYPYEAVDGE---CRYKKSD-SVTTDSGFVDIP 223

Query: 127 NGSET-MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
           +G ET ++  +   GP+SV ++ S     +  T +   +  CS   L H VL+VGYG ++
Sbjct: 224 HGDETALRTAVASVGPVSVAIDASHTSFQFYKTGVY-TEANCSSTQLDHGVLVVGYGVEN 282

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGY 222
              YWLV+NSWG    + G+ K+ R + N CGI   A Y
Sbjct: 283 GQDYWLVKNSWGASWGEAGYIKLARNHGNQCGIASQASY 321



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 16/109 (14%)

Query: 929  IGPDEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHA 973
            +  D GF  I  G+       +A    + V               V  +  CS   L H 
Sbjct: 213  VTTDSGFVDIPHGDETALRTAVASVGPVSVAIDASHTSFQFYKTGVYTEANCSSTQLDHG 272

Query: 974  VLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGY 1021
            VL+VGYG ++   YWLV+NSWG    + G+ K+ R + N CGI   A Y
Sbjct: 273  VLVVGYGVENGQDYWLVKNSWGASWGEAGYIKLARNHGNQCGIASQASY 321


>gi|74229834|gb|AAU14993.2| cysteine proteinase [Cryptobia salmositica]
          Length = 443

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 146/303 (48%), Gaps = 20/303 (6%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 709
           F  F     R YA+ +E ++RFE F  +  K            +G +EF+D + EE   +
Sbjct: 25  FGNFKAAHARNYASPDEERKRFEIFAGNMKKAAVLNRKNPMATFGPNEFADMTSEEFQTR 84

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                + R Y    A   K  K     E    V    DWR K    P  +Q ACGSCW+F
Sbjct: 85  HN---AARHYAAAKARPPKNTKTFTAEEIKAAVGQQIDWRLKGAVTPVKNQGACGSCWSF 141

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKD 826
           S  G +EGQ+AI TG+LV  S+ +LV C     GC+G   + +  +    H+  + +E +
Sbjct: 142 STTGNIEGQHAIATGQLVAVSEQELVSCDPIDDGCNGGLMDNAFGWLISAHKGQIATEAN 201

Query: 827 YPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG    C+   +SK    T   F     +E  M   ++K+GPLS+ +++     
Sbjct: 202 YPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEEDMAAFVFKHGPLSIGVDASTWQS 261

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y G  +      C    + H VL+VG+    + PYW+++NSW     +EG+ ++ +G+N 
Sbjct: 262 YAGGIMSY----CPQDQIDHGVLIVGFDDTASTPYWIIKNSWTANWGEEGYIRVAKGSNQ 317

Query: 945 CGI 947
           CG+
Sbjct: 318 CGL 320



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 144/303 (47%), Gaps = 19/303 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 343
           F  F     R YA+ +E ++RFE F  +  K            +G +EF+D + EE   +
Sbjct: 25  FGNFKAAHARNYASPDEERKRFEIFAGNMKKAAVLNRKNPMATFGPNEFADMTSEEFQTR 84

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                + R Y    A   K  K     E    V    DWR K    P  +Q ACGSCW+F
Sbjct: 85  HN---AARHYAAAKARPPKNTKTFTAEEIKAAVGQQIDWRLKGAVTPVKNQGACGSCWSF 141

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKD 461
           S  G +EGQ+AI TG+LV  S+ +LV C     GC G   D     +   H+  + +E +
Sbjct: 142 STTGNIEGQHAIATGQLVAVSEQELVSCDPIDDGCNGGLMDNAFGWLISAHKGQIATEAN 201

Query: 462 YPYRNGNGEKFKCAYD-KSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHF 519
           YPY +GNG    C+   +SK    T   F     +E  M   ++K+GPLS+G+++     
Sbjct: 202 YPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEEDMAAFVFKHGPLSIGVDASTWQS 261

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
           Y G  +      C    + H VL+VG+      PYW+ +NSW     +EG+ ++ +G+N 
Sbjct: 262 YAGGIMSY----CPQDQIDHGVLIVGFDDTASTPYWIIKNSWTANWGEEGYIRVAKGSNQ 317

Query: 580 CGI 582
           CG+
Sbjct: 318 CGL 320



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 9/206 (4%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR K    P  +Q  CGSCW+FS  G +EGQ+AI TG+LV  S+ +LV C     GC+G
Sbjct: 119 DWRLKGAVTPVKNQGACGSCWSFSTTGNIEGQHAIATGQLVAVSEQELVSCDPIDDGCNG 178

Query: 76  CFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSET 131
              + +  +    H+  + +E +YPY + NG    C+   +SK    T   F     +E 
Sbjct: 179 GLMDNAFGWLISAHKGQIATEANYPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEE 238

Query: 132 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 190
            M   ++K+GPLS+ +++     Y G  +      C    + H VL+VG+    + PYW+
Sbjct: 239 DMAAFVFKHGPLSIGVDASTWQSYAGGIMSY----CPQDQIDHGVLIVGFDDTASTPYWI 294

Query: 191 VRNSWGPIGPDEGFFKIERGNNACGI 216
           ++NSW     +EG+ ++ +G+N CG+
Sbjct: 295 IKNSWTANWGEEGYIRVAKGSNQCGL 320



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            C    + H VL+VG+      PYW+++NSW     +EG+ ++ +G+N CG+
Sbjct: 270  CPQDQIDHGVLIVGFDDTASTPYWIIKNSWTANWGEEGYIRVAKGSNQCGL 320


>gi|194320502|gb|ACF48469.1| cathepsin L [Triatoma brasiliensis]
          Length = 330

 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 123/223 (55%), Gaps = 14/223 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P   DWR+K    P  DQ  CGSCW+FS  G LEGQ  +KTGKLV  S+  LV+C+   
Sbjct: 114 LPKTVDWRQKGAVTPVKDQGQCGSCWSFSATGSLEGQVFLKTGKLVSLSEQNLVDCSTSY 173

Query: 70  -CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GC+G   + + +Y +   G+++E  YPY+     +  C + K+KV    G D  H +
Sbjct: 174 GNNGCEGGLMDQAFQYVSDNKGIDTEASYPYE---ARENTCRFKKNKV---GGTDKGHVD 227

Query: 128 ---GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
              G E  ++  L   GP+SV ++++       +    N+  CS YDL H VL VGYG +
Sbjct: 228 IPAGDEKALQNALATVGPISVAIDANHGSFQFYSKGVYNEPNCSSYDLDHGVLAVGYGTE 287

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           +   YWLV+NSWGP   + G+ KI R + N CGI  +A Y  +
Sbjct: 288 NGQDYWLVKNSWGPSWGENGYIKIARNHSNHCGIASMASYPLV 330



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 123/223 (55%), Gaps = 14/223 (6%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
           +P   DWR+K    P  DQ  CGSCW+FS  G LEGQ  +KTGKLV  S+  LV+C+   
Sbjct: 114 LPKTVDWRQKGAVTPVKDQGQCGSCWSFSATGSLEGQVFLKTGKLVSLSEQNLVDCSTSY 173

Query: 801 -CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
             +GC+G   + + +Y +   G+++E  YPY+     +  C + K+KV    G D  H +
Sbjct: 174 GNNGCEGGLMDQAFQYVSDNKGIDTEASYPYE---ARENTCRFKKNKV---GGTDKGHVD 227

Query: 859 ---GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
              G E  ++  L   GP+SV ++++       +    N+  CS YDL H VL VGYG +
Sbjct: 228 IPAGDEKALQNALATVGPISVAIDANHGSFQFYSKGVYNEPNCSSYDLDHGVLAVGYGTE 287

Query: 915 DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           +   YWLV+NSWGP   + G+ KI R + N CGI  +A Y  +
Sbjct: 288 NGQDYWLVKNSWGPSWGENGYIKIARNHSNHCGIASMASYPLV 330



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 15/224 (6%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P   DWR+K    P  DQ  CGSCW+FS  G LEGQ  +KTGKLV  S+  LV+C+   
Sbjct: 114 LPKTVDWRQKGAVTPVKDQGQCGSCWSFSATGSLEGQVFLKTGKLVSLSEQNLVDCSTSY 173

Query: 436 SGCGGCDG--LEQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            G  GC+G  ++Q  +Y +   G+++E  YPY      +  C + K+KV    G D  + 
Sbjct: 174 -GNNGCEGGLMDQAFQYVSDNKGIDTEASYPYE---ARENTCRFKKNKV---GGTDKGHV 226

Query: 493 N---GSE-TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
           +   G E  ++  L   GP+SV ++++   F   +    N+  CS YDL H VL VGYG 
Sbjct: 227 DIPAGDEKALQNALATVGPISVAIDANHGSFQFYSKGVYNEPNCSSYDLDHGVLAVGYGT 286

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           ++   YWL +NSWGP   + G+ KI R + N CGI  +A Y  +
Sbjct: 287 ENGQDYWLVKNSWGPSWGENGYIKIARNHSNHCGIASMASYPLV 330



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V N+  CS YDL H VL VGYG ++   YWLV+NSWGP   + G+ KI R + N CGI  
Sbjct: 264  VYNEPNCSSYDLDHGVLAVGYGTENGQDYWLVKNSWGPSWGENGYIKIARNHSNHCGIAS 323

Query: 1018 IAGYATI 1024
            +A Y  +
Sbjct: 324  MASYPLV 330


>gi|172050735|gb|ACB70169.1| cathepsin H transcript variant 3 [Sus scrofa]
          Length = 251

 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 121/226 (53%), Gaps = 21/226 (9%)

Query: 740 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           GP P + DWRKK N   P  +Q +CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 30  GPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCA 89

Query: 799 KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 854
           +  +  GC G     + EY  +  G+  E  YPYK   G+   C +   K   F  KD  
Sbjct: 90  QNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-KDVA 145

Query: 855 -LHFNGSETMKKILYKYGPLSV---LLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVL 907
            +  N  E M + +  Y P+S    + N  L++    Y+ T   K     +P  + HAVL
Sbjct: 146 NITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNHAVL 200

Query: 908 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
            VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 201 AVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 246



 Score =  146 bits (368), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 120/226 (53%), Gaps = 21/226 (9%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 30  GPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCA 89

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPYK   G+   C +   K   F  KD  
Sbjct: 90  QNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-KDVA 145

Query: 124 -LHFNGSETMKKILYKYGPLSV---LLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVL 176
            +  N  E M + +  Y P+S    + N  L++    Y+ T   K     +P  + HAVL
Sbjct: 146 NITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNHAVL 200

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
            VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 201 AVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 246



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 119/226 (52%), Gaps = 20/226 (8%)

Query: 374 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           GP P + DWRKK N   P  +Q +CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 30  GPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCA 89

Query: 433 KQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF- 489
           +  +  G   GL  Q  EY  +  G+  E  YPY+   G+   C +   K   F  KD  
Sbjct: 90  QNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-KDVA 145

Query: 490 -LYFNGSETMKKILYKYGPLSVGL---NSHLIH---FYNGTPIRKNDETCSPYDLGHAVL 542
            +  N  E M + +  Y P+S      N  L++    Y+ T   K     +P  + HAVL
Sbjct: 146 NITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNHAVL 200

Query: 543 LVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
            VGYG+++ IPYW+ +NSWGP     G+F IERG N CG+   A Y
Sbjct: 201 AVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 246



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 191  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 246


>gi|118123|sp|P25782.1|CYSP2_HOMAM RecName: Full=Digestive cysteine proteinase 2; Flags: Precursor
 gi|11053|emb|CAA45128.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 323

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 161/364 (44%), Gaps = 61/364 (16%)

Query: 610 AVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 669
           AV  LCGVA     PS                              E FK    K GRQY
Sbjct: 4   AVLFLCGVALAAASPSW-----------------------------EHFKG---KYGRQY 31

Query: 670 ANDEEIKERFEYFKQDG------HKKHER------YGTSEFSDRSPEEILCKTGFKWSER 717
            + EE   R   F+Q+       +KK+E          ++F D + EE            
Sbjct: 32  VDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEF---------NA 82

Query: 718 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEG 777
             +  +  R     +    ++ GP     DWR K    P  DQ  CGSCWAFS  G LEG
Sbjct: 83  VMKGNIPRRSAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEG 142

Query: 778 QYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG 834
           Q+ +KTG L+  ++ QLV+C++     GC+G +   + +Y     G+++E  YPY+  +G
Sbjct: 143 QHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDG 202

Query: 835 EKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 893
               C +D + V           +GSET +++ +   GP+SV +++        +     
Sbjct: 203 ---SCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYY 259

Query: 894 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 952
           + +CSP  L HAVL VGYG +    +WLV+NSW     D G+ K+ R  NN CGI  +A 
Sbjct: 260 EPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVAS 319

Query: 953 YATI 956
           Y  +
Sbjct: 320 YPLV 323



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 160/365 (43%), Gaps = 62/365 (16%)

Query: 244 AVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 303
           AV  LCGVA     PS                              E FK    K GRQY
Sbjct: 4   AVLFLCGVALAAASPSW-----------------------------EHFKG---KYGRQY 31

Query: 304 ANDEEIKERFEYFKQDG------HKKHER------YGTSEFSDRSPEEILCKTGFKWSER 351
            + EE   R   F+Q+       +KK+E          ++F D + EE            
Sbjct: 32  VDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEF---------NA 82

Query: 352 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEG 411
             +  +  R     +    ++ GP     DWR K    P  DQ  CGSCWAFS  G LEG
Sbjct: 83  VMKGNIPRRSAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEG 142

Query: 412 QYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGN 468
           Q+ +KTG L+  ++ QLV+C++   G  GC+G  +    +Y     G+++E  YPY   +
Sbjct: 143 QHFLKTGSLISLAEQQLVDCSRP-YGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARD 201

Query: 469 GEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRK 527
           G    C +D + V           +GSET +++ +   GP+SV +++    F   +    
Sbjct: 202 G---SCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVY 258

Query: 528 NDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIA 586
            + +CSP  L HAVL VGYG +    +WL +NSW     D G+ K+ R  NN CGI  +A
Sbjct: 259 YEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVA 318

Query: 587 GYATI 591
            Y  +
Sbjct: 319 SYPLV 323



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 120/225 (53%), Gaps = 8/225 (3%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           ++ GP     DWR K    P  DQ  CGSCWAFS  G LEGQ+ +KTG L+  ++ QLV+
Sbjct: 102 KETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVD 161

Query: 66  CAKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           C++     GC+G +   + +Y     G+++E  YPY+  +G    C +D + V       
Sbjct: 162 CSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDG---SCRFDSNSVAATCSGH 218

Query: 123 FLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
               +GSET +++ +   GP+SV +++        +     + +CSP  L HAVL VGYG
Sbjct: 219 TNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYG 278

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            +    +WLV+NSW     D G+ K+ R  NN CGI  +A Y  +
Sbjct: 279 SEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVASYPLV 323



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            + +CSP  L HAVL VGYG +    +WLV+NSW     D G+ K+ R  NN CGI  +A 
Sbjct: 260  EPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVAS 319

Query: 1021 YATI 1024
            Y  +
Sbjct: 320  YPLV 323


>gi|323451241|gb|EGB07119.1| hypothetical protein AURANDRAFT_54023 [Aureococcus anophagefferens]
          Length = 377

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 147/330 (44%), Gaps = 39/330 (11%)

Query: 650 DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSE---------FSD 700
           D E + E F  F+ K  + Y   EE   R   F Q+     E    +E         F+D
Sbjct: 57  DVEAVHEAFMTFMTKFEKTYETVEEWAHRLTVFAQNAKIVLEHDAKAEGFALGLDNQFAD 116

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE            +Y+++ +  +  +        D   P A DWR + V     +Q
Sbjct: 117 WTAEEFA----------SYQKLHSRPKPSQAGATHEVSDKAAPTAVDWRTEGVVADIKNQ 166

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---------CSGCDGCFFEP 811
            +CGSCW FS    +EG  A KTGKLV  S+  LV+C K+         C GC G   + 
Sbjct: 167 GSCGSCWTFSTVVSIEGAAARKTGKLVTLSEQNLVDCVKKDQIDGGDECCMGCSGGLMDN 226

Query: 812 SIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKIL 867
           + +Y       G+++E  Y Y   +G    CA+DK+ V            G E  +   L
Sbjct: 227 AFDYIIKNQDGGIDTEASYGYTGKDG---TCAFDKANVGATISNWTDVAVGDEVALADAL 283

Query: 868 YKYGPLSVLLN-SDLIHDYNGTPIR-KNDETCS--PYDLGHAVLLVGYGKQDNIPYWLVR 923
              GP+S+ L+ S     Y+G  ++ ++   CS  P    H V +VGYG  D + YW +R
Sbjct: 284 ANAGPVSIALDASKQWQLYSGGILKPRSILGCSSDPTHADHGVAIVGYGTDDGVDYWWIR 343

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
           NSWG    + G+ ++ERG NACG+   A Y
Sbjct: 344 NSWGTTWGESGYMRLERGVNACGVANFASY 373



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 147/330 (44%), Gaps = 38/330 (11%)

Query: 284 DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSE---------FSD 334
           D E + E F  F+ K  + Y   EE   R   F Q+     E    +E         F+D
Sbjct: 57  DVEAVHEAFMTFMTKFEKTYETVEEWAHRLTVFAQNAKIVLEHDAKAEGFALGLDNQFAD 116

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE            +Y+++ +  +  +        D   P A DWR + V     +Q
Sbjct: 117 WTAEEFA----------SYQKLHSRPKPSQAGATHEVSDKAAPTAVDWRTEGVVADIKNQ 166

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK--QCSG----CGGCDG--LEQ 446
            +CGSCW FS    +EG  A KTGKLV  S+  LV+C K  Q  G    C GC G  ++ 
Sbjct: 167 GSCGSCWTFSTVVSIEGAAARKTGKLVTLSEQNLVDCVKKDQIDGGDECCMGCSGGLMDN 226

Query: 447 PIEY---THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKIL 502
             +Y       G+++E  Y Y   +G    CA+DK+ V            G E  +   L
Sbjct: 227 AFDYIIKNQDGGIDTEASYGYTGKDG---TCAFDKANVGATISNWTDVAVGDEVALADAL 283

Query: 503 YKYGPLSVGLN-SHLIHFYNGTPIR-KNDETCS--PYDLGHAVLLVGYGKQDDIPYWLAR 558
              GP+S+ L+ S     Y+G  ++ ++   CS  P    H V +VGYG  D + YW  R
Sbjct: 284 ANAGPVSIALDASKQWQLYSGGILKPRSILGCSSDPTHADHGVAIVGYGTDDGVDYWWIR 343

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
           NSWG    + G+ ++ERG NACG+   A Y
Sbjct: 344 NSWGTTWGESGYMRLERGVNACGVANFASY 373



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/233 (34%), Positives = 113/233 (48%), Gaps = 20/233 (8%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
            D   P A DWR + V     +Q  CGSCW FS    +EG  A KTGKLV  S+  LV+C
Sbjct: 144 SDKAAPTAVDWRTEGVVADIKNQGSCGSCWTFSTVVSIEGAAARKTGKLVTLSEQNLVDC 203

Query: 67  AKQ---------CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSK 114
            K+         C GC G   + + +Y       G+++E  Y Y   +G    CA+DK+ 
Sbjct: 204 VKKDQIDGGDECCMGCSGGLMDNAFDYIIKNQDGGIDTEASYGYTGKDG---TCAFDKAN 260

Query: 115 VKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLN-SDLIHDYNGTPIR-KNDETCS--PY 169
           V            G E  +   L   GP+S+ L+ S     Y+G  ++ ++   CS  P 
Sbjct: 261 VGATISNWTDVAVGDEVALADALANAGPVSIALDASKQWQLYSGGILKPRSILGCSSDPT 320

Query: 170 DLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
              H V +VGYG  D + YW +RNSWG    + G+ ++ERG NACG+   A Y
Sbjct: 321 HADHGVAIVGYGTDDGVDYWWIRNSWGTTWGESGYMRLERGVNACGVANFASY 373



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 33/55 (60%)

Query: 967  PYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            P    H V +VGYG  D + YW +RNSWG    + G+ ++ERG NACG+   A Y
Sbjct: 319  PTHADHGVAIVGYGTDDGVDYWWIRNSWGTTWGESGYMRLERGVNACGVANFASY 373


>gi|414590229|tpg|DAA40800.1| TPA: putative cysteine protease family protein [Zea mays]
          Length = 381

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 149/329 (45%), Gaps = 41/329 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 709
           F AF+ + GR+Y+  +E   R   F                 R+G + FSD + EE   +
Sbjct: 60  FAAFVRRHGRRYSGPKEYARRLRVFAANLARAAAHQALDPTARHGVTPFSDLTREEFEAR 119

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
            TG +        +            EV +   +P ++DWR K        Q ACGSCWA
Sbjct: 120 LTGLRAGGDVQRLMSGVPAAPPASKEEVAR---LPASFDWRDKGAVTGVKTQGACGSCWA 176

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS---------GCDGCFFEPSIEYTHQA 819
           FS  G +EG   + TG+LV+ S+ QLV+C   CS         GC G     +  Y  ++
Sbjct: 177 FSTTGAVEGANFLATGELVDLSEQQLVDCDHTCSAVAQNECNNGCAGGLMTNAYSYLMES 236

Query: 820 -GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLL 877
            GL  +  YPY  A G    C +D ++V +          G E  ++  L + GPL+V L
Sbjct: 237 GGLMEQSAYPYTGAAG---PCRFDPTQVAVRVANFTAVPAGDEAQIRAALVRRGPLAVGL 293

Query: 878 NSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNI-------PYWLVRNSWG 927
           N+  +  Y G    P+      C    + H VLLVGYG +          PYW+++NSWG
Sbjct: 294 NAAFMQTYVGGVSCPL-----ICPRAWVNHGVLLVGYGARGFAALRLGYRPYWIIKNSWG 348

Query: 928 PIGPDEGFFKIERGNNACGIEQIAGYATI 956
               ++G++++ RG+N CG++ +     +
Sbjct: 349 KQWGEQGYYRLCRGSNVCGVDSMVSAVAV 377



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 147/329 (44%), Gaps = 40/329 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 343
           F AF+ + GR+Y+  +E   R   F                 R+G + FSD + EE   +
Sbjct: 60  FAAFVRRHGRRYSGPKEYARRLRVFAANLARAAAHQALDPTARHGVTPFSDLTREEFEAR 119

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
            TG +        +            EV +   +P ++DWR K        Q ACGSCWA
Sbjct: 120 LTGLRAGGDVQRLMSGVPAAPPASKEEVAR---LPASFDWRDKGAVTGVKTQGACGSCWA 176

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCG------GCDGLEQPIEYTH---Q 453
           FS  G +EG   + TG+LV+ S+ QLV+C   CS         GC G      Y++    
Sbjct: 177 FSTTGAVEGANFLATGELVDLSEQQLVDCDHTCSAVAQNECNNGCAGGLMTNAYSYLMES 236

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGL 512
            GL  +  YPY    G    C +D ++V +          G E  ++  L + GPL+VGL
Sbjct: 237 GGLMEQSAYPYTGAAG---PCRFDPTQVAVRVANFTAVPAGDEAQIRAALVRRGPLAVGL 293

Query: 513 NSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLARNSWG 562
           N+  +  Y G    P+      C    + H VLLVGYG +          PYW+ +NSWG
Sbjct: 294 NAAFMQTYVGGVSCPL-----ICPRAWVNHGVLLVGYGARGFAALRLGYRPYWIIKNSWG 348

Query: 563 PIGPDEGFFKIERGNNACGIEQIAGYATI 591
               ++G++++ RG+N CG++ +     +
Sbjct: 349 KQWGEQGYYRLCRGSNVCGVDSMVSAVAV 377



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 116/236 (49%), Gaps = 29/236 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P ++DWR K        Q  CGSCWAFS  G +EG   + TG+LV+ S+ QLV+C   C
Sbjct: 150 LPASFDWRDKGAVTGVKTQGACGSCWAFSTTGAVEGANFLATGELVDLSEQQLVDCDHTC 209

Query: 71  S---------GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           S         GC G     +  Y  ++ GL  +  YPY  A G    C +D ++V +   
Sbjct: 210 SAVAQNECNNGCAGGLMTNAYSYLMESGGLMEQSAYPYTGAAG---PCRFDPTQVAVRVA 266

Query: 121 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 176
                  G E  ++  L + GPL+V LN+  +  Y G    P+      C    + H VL
Sbjct: 267 NFTAVPAGDEAQIRAALVRRGPLAVGLNAAFMQTYVGGVSCPL-----ICPRAWVNHGVL 321

Query: 177 LVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           LVGYG +          PYW+++NSWG    ++G++++ RG+N CG++ +     +
Sbjct: 322 LVGYGARGFAALRLGYRPYWIIKNSWGKQWGEQGYYRLCRGSNVCGVDSMVSAVAV 377


>gi|157862759|gb|ABV90502.1| cathepsin L, partial [Fasciola gigantica]
          Length = 280

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 114/216 (52%), Gaps = 12/216 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 62  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNQRTSISFSEQQLVDCSGPW 121

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
              GC G   E + EY  Q GLE+E  YPY+   G+   C Y++   V   TG   +H  
Sbjct: 122 GNMGCSGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNRQLGVVKVTGYYTVHSG 178

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++   GP +V ++  SD +   +G       +TCSP+ L HAVL VGYG Q  
Sbjct: 179 SEVGLKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPFGLNHAVLAVGYGTQGG 235

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 236 TDYWIVKNSWGSSWGERGYIRMVRNRGNMCGIASMA 271



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 113/216 (52%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 62  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNQRTSISFSEQQLVDCSGPW 121

Query: 802 S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
              GC G   E + EY  Q GLE+E  YPY+   G+   C Y++   V   TG   +H  
Sbjct: 122 GNMGCSGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNRQLGVVKVTGYYTVHSG 178

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++   GP +V ++  SD +   +G       +TCSP+ L HAVL VGYG Q  
Sbjct: 179 SEVGLKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPFGLNHAVLAVGYGTQGG 235

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 236 TDYWIVKNSWGSSWGERGYIRMVRNRGNMCGIASMA 271



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 114/217 (52%), Gaps = 13/217 (5%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 62  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNQRTSISFSEQQLVDCSGPW 121

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN 493
            G  GC G  +E   EY  Q GLE+E  YPYR   G+   C Y++    +     +   +
Sbjct: 122 -GNMGCSGGLMENAYEYLKQFGLETESSYPYRAVEGQ---CRYNRQLGVVKVTGYYTVHS 177

Query: 494 GSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
           GSE  +K ++   GP +V ++  S  + + +G       +TCSP+ L HAVL VGYG Q 
Sbjct: 178 GSEVGLKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPFGLNHAVLAVGYGTQG 234

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
              YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 235 GTDYWIVKNSWGSSWGERGYIRMVRNRGNMCGIASMA 271



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 17/102 (16%)

Query: 934  GFFKIERGN-----NACGIEQIAGYATIDV----------VKNDETCSPYDLGHAVLLVG 978
            G++ +  G+     N  G E  A  A +DV          +   +TCSP+ L HAVL VG
Sbjct: 171  GYYTVHSGSEVGLKNLVGAEGPAAVA-VDVESDFMMYRSGIYQSQTCSPFGLNHAVLAVG 229

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 1019
            YG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 230  YGTQGGTDYWIVKNSWGSSWGERGYIRMVRNRGNMCGIASMA 271


>gi|17384029|emb|CAD12392.1| cysteine proteinase [Leishmania infantum]
          Length = 354

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 146/313 (46%), Gaps = 31/313 (9%)

Query: 661 FIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTS-EFSDRSPEEI----L 707
           F  + G+ +  D E   RF  FKQ+         H  H  Y  S +F+D +P+E     L
Sbjct: 45  FKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQEFAKLYL 104

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
               +    + Y+  V   + V   +M V          DWR+K V  P  +Q  CGSCW
Sbjct: 105 NPNYYARHGKDYKEHVHVDDSVRSGVMSV----------DWREKGVVTPVKNQGMCGSCW 154

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESE 824
           AF+  G +EGQ+A+K   LV  S+  LV C     GC+G   + ++++    H   + +E
Sbjct: 155 AFATTGNIEGQWALKNHSLVSLSEQVLVSCDNIDDGCNGGLMQQAMQWIINDHNGTVPTE 214

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
             YPY +A G +  C +D   V           +  E +   + K GP++V +++     
Sbjct: 215 DSYPYTSAGGTRPPC-HDNGTVGAKIKGYMSLPHDEEEIAAYVGKNGPVAVAVDATTRQL 273

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y G  +      C    L H VL+VG+ +Q   PYW+V+NSWG    ++G+ ++  G+N 
Sbjct: 274 YFGGVV----TLCFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQ 329

Query: 945 CGIEQIAGYATID 957
           C ++     ATID
Sbjct: 330 CLLKNYVVTATID 342



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 144/314 (45%), Gaps = 32/314 (10%)

Query: 295 FIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTS-EFSDRSPEEI----L 341
           F  + G+ +  D E   RF  FKQ+         H  H  Y  S +F+D +P+E     L
Sbjct: 45  FKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQEFAKLYL 104

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
               +    + Y+  V   + V   +M V          DWR+K V  P  +Q  CGSCW
Sbjct: 105 NPNYYARHGKDYKEHVHVDDSVRSGVMSV----------DWREKGVVTPVKNQGMCGSCW 154

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLES 458
           AF+  G +EGQ+A+K   LV  S+  LV C     GC G   ++Q +++    H   + +
Sbjct: 155 AFATTGNIEGQWALKNHSLVSLSEQVLVSCDNIDDGCNG-GLMQQAMQWIINDHNGTVPT 213

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E  YPY +  G +  C +D   V           +  E +   + K GP++V +++    
Sbjct: 214 EDSYPYTSAGGTRPPC-HDNGTVGAKIKGYMSLPHDEEEIAAYVGKNGPVAVAVDATTRQ 272

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y G  +      C    L H VL+VG+ +Q   PYW+ +NSWG    ++G+ ++  G+N
Sbjct: 273 LYFGGVV----TLCFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGYIRLAMGSN 328

Query: 579 ACGIEQIAGYATID 592
            C ++     ATID
Sbjct: 329 QCLLKNYVVTATID 342



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 8/214 (3%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR+K V  P  +Q  CGSCWAF+  G +EGQ+A+K   LV  S+  LV C     GC+G
Sbjct: 134 DWREKGVVTPVKNQGMCGSCWAFATTGNIEGQWALKNHSLVSLSEQVLVSCDNIDDGCNG 193

Query: 76  CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 132
              + ++++    H   + +E  YPY +A G +  C +D   V           +  E +
Sbjct: 194 GLMQQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIKGYMSLPHDEEEI 252

Query: 133 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 192
              + K GP++V +++     Y G  +      C    L H VL+VG+ +Q   PYW+V+
Sbjct: 253 AAYVGKNGPVAVAVDATTRQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAKPPYWIVK 308

Query: 193 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           NSWG    ++G+ ++  G+N C ++     ATID
Sbjct: 309 NSWGSSWGEKGYIRLAMGSNQCLLKNYVVTATID 342



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L H VL+VG+ +Q   PYW+V+NSWG    ++G+ ++  G+N C ++     ATI
Sbjct: 282  CFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYVVTATI 341

Query: 1025 D 1025
            D
Sbjct: 342  D 342


>gi|79314271|ref|NP_001030812.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
 gi|332644501|gb|AEE78022.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
          Length = 357

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 144/302 (47%), Gaps = 25/302 (8%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGTS--EFSDRSPEEILC 342
           +F  F  + G++Y + EE+K RF  FK++       +KK   Y  S  +F+D + +E   
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQ- 116

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
               ++     +   A  +   K+      +  VPD  DWR+  +  P  +Q  CGSCW 
Sbjct: 117 ----RYKLGAAQNCSATLKGSHKI-----TEATVPDTKDWREDGIVSPVKEQGHCGSCWT 167

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GL++E+
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEE 227

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-HLIH 518
            YPY   +G    C +    + +          G+E  +K  +    P+SV     H   
Sbjct: 228 AYPYTGKDG---GCKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVHEFR 284

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY       N    +P D+ HAVL VGYG +DD+PYWL +NSWG    D G+FK+E G N
Sbjct: 285 FYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKN 344

Query: 579 AC 580
            C
Sbjct: 345 MC 346



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 30/304 (9%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGTS--EFSDRSPEEILC 708
           +F  F  + G++Y + EE+K RF  FK++       +KK   Y  S  +F+D + +E   
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQ- 116

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
               ++     +   A  +   K+      +  VPD  DWR+  +  P  +Q  CGSCW 
Sbjct: 117 ----RYKLGAAQNCSATLKGSHKI-----TEATVPDTKDWREDGIVSPVKEQGHCGSCWT 167

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA   +  GC G     + EY  +  GL++E+
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEE 227

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
            YPY   +G    C +    + +       +     + +K  +    P+SV    +++H+
Sbjct: 228 AYPYTGKDG---GCKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAF--EVVHE 282

Query: 885 ---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
              Y       N    +P D+ HAVL VGYG +D++PYWL++NSWG    D G+FK+E G
Sbjct: 283 FRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMG 342

Query: 942 NNAC 945
            N C
Sbjct: 343 KNMC 346



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 109/214 (50%), Gaps = 12/214 (5%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  VPD  DWR+  +  P  +Q  CGSCW FS  G LE  Y    GK +  S+ QLV+CA
Sbjct: 138 EATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCA 197

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
              +  GC G     + EY  +  GL++E+ YPY   +G    C +    + +       
Sbjct: 198 GTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG---GCKFSAKNIGVQVRDSVN 254

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGY 180
           +     + +K  +    P+SV    +++H+   Y       N    +P D+ HAVL VGY
Sbjct: 255 ITLGAEDELKHAVGLVRPVSVAF--EVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGY 312

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           G +D++PYWL++NSWG    D G+FK+E G N C
Sbjct: 313 GVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMC 346



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 2/57 (3%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            V    TC  +P D+ HAVL VGYG +DD+PYWL++NSWG    D G+FK+E G N C
Sbjct: 290  VFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMC 346


>gi|6967097|emb|CAB72480.1| cysteine protease-like protein [Arabidopsis thaliana]
          Length = 377

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 144/302 (47%), Gaps = 25/302 (8%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGTS--EFSDRSPEEILC 342
           +F  F  + G++Y + EE+K RF  FK++       +KK   Y  S  +F+D + +E   
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQ- 116

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
               ++     +   A  +   K+      +  VPD  DWR+  +  P  +Q  CGSCW 
Sbjct: 117 ----RYKLGAAQNCSATLKGSHKI-----TEATVPDTKDWREDGIVSPVKEQGHCGSCWT 167

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GL++E+
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEE 227

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-HLIH 518
            YPY   +G    C +    + +          G+E  +K  +    P+SV     H   
Sbjct: 228 AYPYTGKDG---GCKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVHEFR 284

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY       N    +P D+ HAVL VGYG +DD+PYWL +NSWG    D G+FK+E G N
Sbjct: 285 FYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKN 344

Query: 579 AC 580
            C
Sbjct: 345 MC 346



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 30/304 (9%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGTS--EFSDRSPEEILC 708
           +F  F  + G++Y + EE+K RF  FK++       +KK   Y  S  +F+D + +E   
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQ- 116

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
               ++     +   A  +   K+      +  VPD  DWR+  +  P  +Q  CGSCW 
Sbjct: 117 ----RYKLGAAQNCSATLKGSHKI-----TEATVPDTKDWREDGIVSPVKEQGHCGSCWT 167

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA   +  GC G     + EY  +  GL++E+
Sbjct: 168 FSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEE 227

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
            YPY   +G    C +    + +       +     + +K  +    P+SV    +++H+
Sbjct: 228 AYPYTGKDG---GCKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAF--EVVHE 282

Query: 885 ---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
              Y       N    +P D+ HAVL VGYG +D++PYWL++NSWG    D G+FK+E G
Sbjct: 283 FRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMG 342

Query: 942 NNAC 945
            N C
Sbjct: 343 KNMC 346



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 109/214 (50%), Gaps = 12/214 (5%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  VPD  DWR+  +  P  +Q  CGSCW FS  G LE  Y    GK +  S+ QLV+CA
Sbjct: 138 EATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCA 197

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
              +  GC G     + EY  +  GL++E+ YPY   +G    C +    + +       
Sbjct: 198 GTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG---GCKFSAKNIGVQVRDSVN 254

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGY 180
           +     + +K  +    P+SV    +++H+   Y       N    +P D+ HAVL VGY
Sbjct: 255 ITLGAEDELKHAVGLVRPVSVAF--EVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGY 312

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           G +D++PYWL++NSWG    D G+FK+E G N C
Sbjct: 313 GVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMC 346



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 2/57 (3%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            V    TC  +P D+ HAVL VGYG +DD+PYWL++NSWG    D G+FK+E G N C
Sbjct: 290  VFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMC 346


>gi|327289219|ref|XP_003229322.1| PREDICTED: cathepsin K-like, partial [Anolis carolinensis]
          Length = 289

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 135/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +   R+     L   + +  VPDA D+RKK   
Sbjct: 36  NHLGDMTSEELVQKMTGLK--------VPLSRKPSNDTLYIPDWEERVPDAVDYRKKGYV 87

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LE Q  +KTGKL+  S   LV+C     GCGG   +    
Sbjct: 88  TPVKNQGQCGSCWAFSSVGALEAQLKMKTGKLLNLSPQNLVDCVSNNDGCGG-GYMTNAF 146

Query: 449 EYTH-QAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           EY H   G++S+  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 147 EYVHVNRGIDSDDTYPYI---GQDENCMYNPTGKAAKCRGYKEIPEGDEKALKRAVARKG 203

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SVG+++ L  F   +     DE C+  ++ HAVL VGYG Q    +W+ +NSWG    
Sbjct: 204 PVSVGIDASLASFQFYSRGVYYDENCNADNINHAVLAVGYGSQKGTKHWIVKNSWGEDWG 263

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           D+G+  + R  NNACGI  +A +  +
Sbjct: 264 DKGYILMARNMNNACGIANLASFPKM 289



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 134/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +   R+     L   + +  VPDA D+RKK   
Sbjct: 36  NHLGDMTSEELVQKMTGLK--------VPLSRKPSNDTLYIPDWEERVPDAVDYRKKGYV 87

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LE Q  +KTGKL+  S   LV+C     GC G +   + E
Sbjct: 88  TPVKNQGQCGSCWAFSSVGALEAQLKMKTGKLLNLSPQNLVDCVSNNDGCGGGYMTNAFE 147

Query: 815 YTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y H   G++S+  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 148 YVHVNRGIDSDDTYPYI---GQDENCMYNPTGKAAKCRGYKEIPEGDEKALKRAVARKGP 204

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE C+  ++ HAVL VGYG Q    +W+V+NSWG    D
Sbjct: 205 VSVGIDASLASFQFYSRGVYYDENCNADNINHAVLAVGYGSQKGTKHWIVKNSWGEDWGD 264

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 265 KGYILMARNMNNACGIANLASFPKM 289



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA D+RKK    P  +Q  CGSCWAFS  G LE Q  +KTGKL+  S   LV+C    
Sbjct: 75  VPDAVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEAQLKMKTGKLLNLSPQNLVDCVSNN 134

Query: 71  SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 128
            GC G +   + EY H   G++S+  YPY    G+   C Y+ + K     G   +    
Sbjct: 135 DGCGGGYMTNAFEYVHVNRGIDSDDTYPYI---GQDENCMYNPTGKAAKCRGYKEIPEGD 191

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +K+ + + GP+SV +++ L      +     DE C+  ++ HAVL VGYG Q    +
Sbjct: 192 EKALKRAVARKGPVSVGIDASLASFQFYSRGVYYDENCNADNINHAVLAVGYGSQKGTKH 251

Query: 189 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           W+V+NSWG    D+G+  + R  NNACGI  +A +  +
Sbjct: 252 WIVKNSWGEDWGDKGYILMARNMNNACGIANLASFPKM 289



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  ++ HAVL VGYG Q    +W+V+NSWG    D+G+  + R  NNACGI  +A 
Sbjct: 226  DENCNADNINHAVLAVGYGSQKGTKHWIVKNSWGEDWGDKGYILMARNMNNACGIANLAS 285

Query: 1021 YATI 1024
            +  +
Sbjct: 286  FPKM 289


>gi|20147096|gb|AAM09951.1| 49 kDa cysteine proteinase Cysp1 [Cryptobia salmositica]
          Length = 428

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 146/303 (48%), Gaps = 20/303 (6%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 709
           F  F     R YA+ +E ++RFE F  +  K            +G +EF+D + EE   +
Sbjct: 10  FGNFKAAHARNYASPDEERKRFEIFAGNMKKAAVLNRKNPMATFGPNEFADMTSEEFQTR 69

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                + R Y    A   K  K     E    V    DWR K    P  +Q ACGSCW+F
Sbjct: 70  HN---AARHYAAAKARPPKNTKTFTAEEIKAAVGQQIDWRLKGAVTPVKNQGACGSCWSF 126

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKD 826
           S  G +EGQ+AI TG+LV  S+ +LV C     GC+G   + +  +    H+  + +E +
Sbjct: 127 STTGNIEGQHAIATGQLVAVSEQELVSCDPIDDGCNGGLMDNAFGWLISAHKGQIATEAN 186

Query: 827 YPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG    C+   +SK    T   F     +E  M   ++K+GPLS+ +++     
Sbjct: 187 YPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEEDMAAFVFKHGPLSIGVDASTWQS 246

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y G  +      C    + H VL+VG+    + PYW+++NSW     +EG+ ++ +G+N 
Sbjct: 247 YAGGIMSY----CPQDQIDHGVLIVGFDDTASTPYWIIKNSWTANWGEEGYIRVAKGSNQ 302

Query: 945 CGI 947
           CG+
Sbjct: 303 CGL 305



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 144/303 (47%), Gaps = 19/303 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 343
           F  F     R YA+ +E ++RFE F  +  K            +G +EF+D + EE   +
Sbjct: 10  FGNFKAAHARNYASPDEERKRFEIFAGNMKKAAVLNRKNPMATFGPNEFADMTSEEFQTR 69

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                + R Y    A   K  K     E    V    DWR K    P  +Q ACGSCW+F
Sbjct: 70  HN---AARHYAAAKARPPKNTKTFTAEEIKAAVGQQIDWRLKGAVTPVKNQGACGSCWSF 126

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKD 461
           S  G +EGQ+AI TG+LV  S+ +LV C     GC G   D     +   H+  + +E +
Sbjct: 127 STTGNIEGQHAIATGQLVAVSEQELVSCDPIDDGCNGGLMDNAFGWLISAHKGQIATEAN 186

Query: 462 YPYRNGNGEKFKCAYD-KSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHF 519
           YPY +GNG    C+   +SK    T   F     +E  M   ++K+GPLS+G+++     
Sbjct: 187 YPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEEDMAAFVFKHGPLSIGVDASTWQS 246

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
           Y G  +      C    + H VL+VG+      PYW+ +NSW     +EG+ ++ +G+N 
Sbjct: 247 YAGGIMSY----CPQDQIDHGVLIVGFDDTASTPYWIIKNSWTANWGEEGYIRVAKGSNQ 302

Query: 580 CGI 582
           CG+
Sbjct: 303 CGL 305



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 9/206 (4%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR K    P  +Q  CGSCW+FS  G +EGQ+AI TG+LV  S+ +LV C     GC+G
Sbjct: 104 DWRLKGAVTPVKNQGACGSCWSFSTTGNIEGQHAIATGQLVAVSEQELVSCDPIDDGCNG 163

Query: 76  CFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSET 131
              + +  +    H+  + +E +YPY + NG    C+   +SK    T   F     +E 
Sbjct: 164 GLMDNAFGWLISAHKGQIATEANYPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEE 223

Query: 132 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 190
            M   ++K+GPLS+ +++     Y G  +      C    + H VL+VG+    + PYW+
Sbjct: 224 DMAAFVFKHGPLSIGVDASTWQSYAGGIMSY----CPQDQIDHGVLIVGFDDTASTPYWI 279

Query: 191 VRNSWGPIGPDEGFFKIERGNNACGI 216
           ++NSW     +EG+ ++ +G+N CG+
Sbjct: 280 IKNSWTANWGEEGYIRVAKGSNQCGL 305



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            C    + H VL+VG+      PYW+++NSW     +EG+ ++ +G+N CG+
Sbjct: 255  CPQDQIDHGVLIVGFDDTASTPYWIIKNSWTANWGEEGYIRVAKGSNQCGL 305


>gi|402770509|gb|AFQ98389.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 8/223 (3%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 68  KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 123
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V    TG   
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYVE 229

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +     + +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG +
Sbjct: 230 IKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVK 289

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
               YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 290 GGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 8/223 (3%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 799 KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 854
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V    TG   
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYVE 229

Query: 855 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
           +     + +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG +
Sbjct: 230 IKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVK 289

Query: 915 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
               YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 290 GGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 119/224 (53%), Gaps = 9/224 (4%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 433 KQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKD 488
            Q  G  GC+G  +E   +Y     G+++EK YPY   +GE   C + K  V    TG  
Sbjct: 173 -QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYV 228

Query: 489 FLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
            +     + +KK +   GP+SV +++    F   +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           +    YWL +NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 1017
            V ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266  VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 326  QASYPLV 332


>gi|454101|gb|AAA82966.1| cathepsin H prepropeptide [Mus musculus]
          Length = 333

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 152/316 (48%), Gaps = 30/316 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGT-----SEFSDRSPEEILCK 709
           FK+++ +  + Y+   E   R + F  +  K    ++R  T     ++FSD S  EI  K
Sbjct: 33  FKSWMKQHQKTYS-SVEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEI--K 89

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             F WSE   +   A +         +   GP P + DWRKK NV  P  +Q AC SCW 
Sbjct: 90  HKFLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWT 141

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI +GK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 142 FSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEED 201

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVL--LNSDLI 882
            YPY    G+   C ++  K   F      +  N    M + +  Y P+S    +  D +
Sbjct: 202 SYPYI---GKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFL 258

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
              +G    K+    +P  + HAVL VGYG+Q+ + YW+V+NSWG    + G+F IERG 
Sbjct: 259 MYKSGVYSSKSCHK-TPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGK 317

Query: 943 NACGIEQIAGYATIDV 958
           N CG+   A Y    V
Sbjct: 318 NMCGLAACASYPIPQV 333



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 151/316 (47%), Gaps = 29/316 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGT-----SEFSDRSPEEILCK 343
           FK+++ +  + Y+   E   R + F  +  K    ++R  T     ++FSD S  EI  K
Sbjct: 33  FKSWMKQHQKTYS-SVEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEI--K 89

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             F WSE   +   A +         +   GP P + DWRKK NV  P  +Q AC SCW 
Sbjct: 90  HKFLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWT 141

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI +GK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 142 FSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEED 201

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVG--LNSHLI 517
            YPY    G+   C ++  K   F      +  N    M + +  Y P+S    +    +
Sbjct: 202 SYPYI---GKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFL 258

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            + +G    K+    +P  + HAVL VGYG+Q+ + YW+ +NSWG    + G+F IERG 
Sbjct: 259 MYKSGVYSSKSCHK-TPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGK 317

Query: 578 NACGIEQIAGYATIDV 593
           N CG+   A Y    V
Sbjct: 318 NMCGLAACASYPIPQV 333



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/226 (35%), Positives = 115/226 (50%), Gaps = 11/226 (4%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK NV  P  +Q  C SCW FS  G LE   AI +GK++  ++ QLV+CA
Sbjct: 112 GPYPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCA 171

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC G     + EY  +  G+  E  YPY    G+   C ++  K   F      
Sbjct: 172 QAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYI---GKDSSCRFNPQKAVAFVKNVVN 228

Query: 124 LHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           +  N    M + +  Y P+S    +  D +   +G    K+    +P  + HAVL VGYG
Sbjct: 229 ITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHK-TPDKVNHAVLAVGYG 287

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           +Q+ + YW+V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 288 EQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAACASYPIPQV 333



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 2/70 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V + ++C  +P  + HAVL VGYG+Q+ + YW+V+NSWG    + G+F IERG N CG+ 
Sbjct: 264  VYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLA 323

Query: 1017 QIAGYATIDV 1026
              A Y    V
Sbjct: 324  ACASYPIPQV 333


>gi|28192371|gb|AAK07729.1| NTCP23-like cysteine proteinase [Nicotiana tabacum]
          Length = 360

 Score =  146 bits (368), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 148/310 (47%), Gaps = 28/310 (9%)

Query: 661 FIVKRGRQYANDEEIKERFEYFKQD-----GHKK---HERYGTSEFSDRSPEEILCKTGF 712
           F  + G++Y + EEIK+RFE F  +      H K     + G +EF+D            
Sbjct: 64  FAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD-----------L 112

Query: 713 KWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 770
            W E   +R+ A +      K  ++V  +  +P+   WR+  +  P  +Q  CGSCW FS
Sbjct: 113 TWDEFRRDRLGAAQNCSATTKGNLKV-TNVVLPETKGWREAGIVSPVKNQGKCGSCWTFS 171

Query: 771 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDY 827
             G LE  Y+   GK +  S+ QLV+CA   +  GC+G     + EY     GL++E+ Y
Sbjct: 172 TTGALEAAYSQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTEEAY 231

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYN 886
           PY   NG   K + +   VK+    + +     + +K  +    P+S+          Y 
Sbjct: 232 PYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAEDELKYAVALVRPVSIAFEVIKGFKQYK 289

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
                  +   +P D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N CG
Sbjct: 290 SGVYTSTECGNTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCG 349

Query: 947 IEQIAGYATI 956
           I   A Y  +
Sbjct: 350 IATCASYPVV 359



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 148/315 (46%), Gaps = 37/315 (11%)

Query: 295 FIVKRGRQYANDEEIKERFEYFKQD-----GHKK---HERYGTSEFSDRSPEEILCKTGF 346
           F  + G++Y + EEIK+RFE F  +      H K     + G +EF+D            
Sbjct: 64  FAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD-----------L 112

Query: 347 KWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 404
            W E   +R+ A +      K  ++V  +  +P+   WR+  +  P  +Q  CGSCW FS
Sbjct: 113 TWDEFRRDRLGAAQNCSATTKGNLKV-TNVVLPETKGWREAGIVSPVKNQGKCGSCWTFS 171

Query: 405 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKDY 462
             G LE  Y+   GK +  S+ QLV+CA   +  G   GL  Q  EY     GL++E+ Y
Sbjct: 172 TTGALEAAYSQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTEEAY 231

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSV------GLNSHL 516
           PY   NG   K + +   VK+    + +     + +K  +    P+S+      G   + 
Sbjct: 232 PYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAEDELKYAVALVRPVSIAFEVIKGFKQYK 289

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y  T         +P D+ HAVL VGYG ++ +PYWL +NSWG    D G+FK+E G
Sbjct: 290 SGVYTSTECGN-----TPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMG 344

Query: 577 NNACGIEQIAGYATI 591
            N CGI   A Y  +
Sbjct: 345 KNMCGIATCASYPVV 359



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 110/219 (50%), Gaps = 6/219 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+   WR+  +  P  +Q  CGSCW FS  G LE  Y+   GK +  S+ QLV+CA   
Sbjct: 143 LPETKGWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYSQAFGKGISLSEQQLVDCAGAF 202

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +  GC+G     + EY     GL++E+ YPY   NG   K + +   VK+    + +   
Sbjct: 203 NNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLG 260

Query: 128 GSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
             + +K  +    P+S+          Y        +   +P D+ HAVL VGYG ++ +
Sbjct: 261 AEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGNTPMDVNHAVLAVGYGVENGV 320

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 321 PYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVV 359


>gi|167427527|gb|ABZ80400.1| cathepsin L4, partial [Fasciola hepatica]
          Length = 303

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 119/226 (52%), Gaps = 12/226 (5%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
            D  VP++ DWR+        DQ DCGSCWAFS  G +EGQY       + FS+ QLV+C
Sbjct: 81  NDRAVPESIDWREFGYVTEVKDQGDCGSCWAFSTTGAVEGQYTKNQKANISFSEQQLVDC 140

Query: 67  AKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +      GC+G F E + EY  + GLE+E  YPYK    E+  C YD     +     F+
Sbjct: 141 SGDYGNHGCNGGFMENAYEYLERRGLETESSYPYK---AEEGPCKYDSRLGVVEVFGYFI 197

Query: 125 HFNGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
             +G E+ +  ++   GP +V ++  SD +    G    +N   CS   L H +L+VGYG
Sbjct: 198 EHSGIESKLAHLVGDKGPAAVAVDVESDFLMYRGGIYASRN---CSSESLNHGILVVGYG 254

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATID 226
            QD   YW+V+NSWG +  D G+ ++ R  +N CGI   A    ++
Sbjct: 255 TQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCGIASAASVPVVE 300



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 139/274 (50%), Gaps = 25/274 (9%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKN 752
           G S+F+D + EE          + TY R +     +    +  E  D  VP++ DWR+  
Sbjct: 45  GLSQFTDMTFEEF---------KATYLREIPRASDMLSHGIPYEANDRAVPESIDWREFG 95

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFE 810
                 DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+      GC+G F E
Sbjct: 96  YVTEVKDQGDCGSCWAFSTTGAVEGQYTKNQKANISFSEQQLVDCSGDYGNHGCNGGFME 155

Query: 811 PSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYK 869
            + EY  + GLE+E  YPYK    E+  C YD     +     F+  +G E+ +  ++  
Sbjct: 156 NAYEYLERRGLETESSYPYK---AEEGPCKYDSRLGVVEVFGYFIEHSGIESKLAHLVGD 212

Query: 870 YGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927
            GP +V ++  SD +    G    +N   CS   L H +L+VGYG QD   YW+V+NSWG
Sbjct: 213 KGPAAVAVDVESDFLMYRGGIYASRN---CSSESLNHGILVVGYGTQDGTDYWIVKNSWG 269

Query: 928 PIGPDEGFFKIERG-NNACGIEQIAGYATIDVVK 960
            +  D G+ ++ R  +N CG   IA  A++ VV+
Sbjct: 270 SLWGDHGYIRMARNRDNMCG---IASAASVPVVE 300



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 134/272 (49%), Gaps = 23/272 (8%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKN 386
           G S+F+D + EE          + TY R +     +    +  E  D  VP++ DWR+  
Sbjct: 45  GLSQFTDMTFEEF---------KATYLREIPRASDMLSHGIPYEANDRAVPESIDWREFG 95

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--L 444
                 DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+    G  GC+G  +
Sbjct: 96  YVTEVKDQGDCGSCWAFSTTGAVEGQYTKNQKANISFSEQQLVDCSGD-YGNHGCNGGFM 154

Query: 445 EQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILY 503
           E   EY  + GLE+E  YPY+    E+  C YD     +     F+  +G E+ +  ++ 
Sbjct: 155 ENAYEYLERRGLETESSYPYK---AEEGPCKYDSRLGVVEVFGYFIEHSGIESKLAHLVG 211

Query: 504 KYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
             GP +V ++  S  + +  G    +N   CS   L H +L+VGYG QD   YW+ +NSW
Sbjct: 212 DKGPAAVAVDVESDFLMYRGGIYASRN---CSSESLNHGILVVGYGTQDGTDYWIVKNSW 268

Query: 562 GPIGPDEGFFKIERG-NNACGIEQIAGYATID 592
           G +  D G+ ++ R  +N CGI   A    ++
Sbjct: 269 GSLWGDHGYIRMARNRDNMCGIASAASVPVVE 300


>gi|146335580|gb|ABQ23399.1| cathepsin L isotype 2 [Trypanoplasma borreli]
          Length = 443

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 183/435 (42%), Gaps = 69/435 (15%)

Query: 634  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-- 691
            V A +    + G+ T D     + F  F     R Y +  E ++RFE F  +  K  E  
Sbjct: 6    VTALLMVCTVMGAPTTD-----DLFSDFKATHARNYVSPGEERKRFEIFAANMKKAAELN 60

Query: 692  ------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDA 745
                   +G +EF+D S EE   +     + R Y    A R K  K   + E        
Sbjct: 61   RKNPMATFGPNEFADMSSEEFQTRHN---AARHYAAAKARRAKHTKSFTKEEIKAADGQK 117

Query: 746  WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 805
             DWR K       +Q +CGSCW+FS  G +EGQ AI TG LV  S+ +LV C    +GC+
Sbjct: 118  IDWRLKGAVTSVKNQGSCGSCWSFSTTGNIEGQNAIATGNLVSLSEQELVSCDTTDNGCN 177

Query: 806  GCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSE 861
            G   + +  +   T    + +E  YPY + NG    C+Y+  +K    T  +F    G+E
Sbjct: 178  GGLMDNAFGWLISTRGGQIATEASYPYVSGNGIVPACSYNLDNKPVGATISNFQDITGTE 237

Query: 862  T-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
              M   ++ YGPLS+ +++     Y G  I      C    + H VL+VGY      PYW
Sbjct: 238  EDMAAFVFNYGPLSIGVDASTWQSYAGGIITY----CPDVQIDHGVLIVGYDDTAPTPYW 293

Query: 921  LVRNSWGPIGPDEGFFKIERGNNACGIEQIA-------GYATIDVVKNDE---------- 963
            +++NSW     ++G+ ++ +G+N CG+           G+ +I  +   E          
Sbjct: 294  IIKNSWTANWGEDGYIRVAKGSNMCGLTSTPSSSVVGNGHRSIPALTIPESGNLIQVTCL 353

Query: 964  ----------------TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGP----------- 996
                            TC P++ G +V+   Y  Q  +  +   +  GP           
Sbjct: 354  DAKCSDGCSRNIFPLHTCIPFNEGASVIAACYPSQVALSVYQSTDCTGPSQSTALSLNQC 413

Query: 997  IGPDEGFFKIERGNN 1011
            +  D G+F+I   +N
Sbjct: 414  LMSDTGYFEIMCASN 428



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 153/336 (45%), Gaps = 24/336 (7%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-- 325
           V A +    + G+ T D     + F  F     R Y +  E ++RFE F  +  K  E  
Sbjct: 6   VTALLMVCTVMGAPTTD-----DLFSDFKATHARNYVSPGEERKRFEIFAANMKKAAELN 60

Query: 326 ------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDA 379
                  +G +EF+D S EE   +     + R Y    A R K  K   + E        
Sbjct: 61  RKNPMATFGPNEFADMSSEEFQTRHN---AARHYAAAKARRAKHTKSFTKEEIKAADGQK 117

Query: 380 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCG 439
            DWR K       +Q +CGSCW+FS  G +EGQ AI TG LV  S+ +LV C    +GC 
Sbjct: 118 IDWRLKGAVTSVKNQGSCGSCWSFSTTGNIEGQNAIATGNLVSLSEQELVSCDTTDNGCN 177

Query: 440 G--CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLYFNGSE 496
           G   D     +  T    + +E  YPY +GNG    C+Y+  +K    T  +F    G+E
Sbjct: 178 GGLMDNAFGWLISTRGGQIATEASYPYVSGNGIVPACSYNLDNKPVGATISNFQDITGTE 237

Query: 497 T-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
             M   ++ YGPLS+G+++     Y G  I      C    + H VL+VGY      PYW
Sbjct: 238 EDMAAFVFNYGPLSIGVDASTWQSYAGGIITY----CPDVQIDHGVLIVGYDDTAPTPYW 293

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           + +NSW     ++G+ ++ +G+N CG+      + +
Sbjct: 294 IIKNSWTANWGEDGYIRVAKGSNMCGLTSTPSSSVV 329



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 9/215 (4%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR K       +Q  CGSCW+FS  G +EGQ AI TG LV  S+ +LV C    +GC+G
Sbjct: 119 DWRLKGAVTSVKNQGSCGSCWSFSTTGNIEGQNAIATGNLVSLSEQELVSCDTTDNGCNG 178

Query: 76  CFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSET 131
              + +  +   T    + +E  YPY + NG    C+Y+  +K    T  +F    G+E 
Sbjct: 179 GLMDNAFGWLISTRGGQIATEASYPYVSGNGIVPACSYNLDNKPVGATISNFQDITGTEE 238

Query: 132 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 190
            M   ++ YGPLS+ +++     Y G  I      C    + H VL+VGY      PYW+
Sbjct: 239 DMAAFVFNYGPLSIGVDASTWQSYAGGIITY----CPDVQIDHGVLIVGYDDTAPTPYWI 294

Query: 191 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           ++NSW     ++G+ ++ +G+N CG+      + +
Sbjct: 295 IKNSWTANWGEDGYIRVAKGSNMCGLTSTPSSSVV 329



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 33/60 (55%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    + H VL+VGY      PYW+++NSW     ++G+ ++ +G+N CG+      + +
Sbjct: 270  CPDVQIDHGVLIVGYDDTAPTPYWIIKNSWTANWGEDGYIRVAKGSNMCGLTSTPSSSVV 329


>gi|402770501|gb|AFQ98385.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 8/223 (3%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 68  KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 123
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V    TG   
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYVE 229

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +     + +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG +
Sbjct: 230 IKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVK 289

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
               YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 290 GGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 8/223 (3%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 799 KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 854
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V    TG   
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYVE 229

Query: 855 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
           +     + +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG +
Sbjct: 230 IKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVK 289

Query: 915 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
               YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 290 GGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 119/224 (53%), Gaps = 9/224 (4%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 433 KQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKD 488
            Q  G  GC+G  +E   +Y     G+++EK YPY   +GE   C + K  V    TG  
Sbjct: 173 -QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYV 228

Query: 489 FLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
            +     + +KK +   GP+SV +++    F   +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           +    YWL +NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 1017
            V ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266  VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 326  QASYPLV 332


>gi|195729975|gb|ACG50798.1| cathepsin L1 [Fascioloides magna]
          Length = 327

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 140/272 (51%), Gaps = 20/272 (7%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRKKN 752
           G ++F+D + EE   K  F+ S ++        E +    +  +  G  VP++ DWR   
Sbjct: 68  GLNQFTDMTFEEFKAKYLFEISPKS--------ELLSHSGISYQAKGNDVPESIDWRDYG 119

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFE 810
                 DQ  CGSCWAFS  G +EGQY  K    V FS+ QLV+C +    SGC+G + E
Sbjct: 120 YVTEVKDQGQCGSCWAFSSTGAMEGQYIKKFRTTVSFSEQQLVDCTRNYGNSGCNGGWME 179

Query: 811 PSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYK 869
            + EY  + GLE+E  YPY+  +     C Y+    V   TG    H     ++  ++  
Sbjct: 180 RAFEYLRRNGLETESSYPYRAVDDH---CRYESQLGVAKVTGYYTEHSGNEVSLMNMVGG 236

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GP++V ++         + I ++ ETCS Y + HAVL VGYG +    YW+++NSWG  
Sbjct: 237 EGPVAVAVDVQSDFSMYKSGIYQS-ETCSTYYVNHAVLAVGYGTESGTDYWILKNSWGSW 295

Query: 930 GPDEGFFKIERG-NNACGIEQIAGYATIDVVK 960
             D+G+ +  R  NN CG   IA YA++ +V+
Sbjct: 296 WGDQGYIRFARNRNNMCG---IASYASVPMVE 324



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 120/226 (53%), Gaps = 11/226 (4%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           K   VP++ DWR         DQ  CGSCWAFS  G +EGQY  K    V FS+ QLV+C
Sbjct: 105 KGNDVPESIDWRDYGYVTEVKDQGQCGSCWAFSSTGAMEGQYIKKFRTTVSFSEQQLVDC 164

Query: 67  AKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDF 123
            +    SGC+G + E + EY  + GLE+E  YPY+  +     C Y+    V   TG   
Sbjct: 165 TRNYGNSGCNGGWMERAFEYLRRNGLETESSYPYRAVDDH---CRYESQLGVAKVTGYYT 221

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            H     ++  ++   GP++V ++         + I ++ ETCS Y + HAVL VGYG +
Sbjct: 222 EHSGNEVSLMNMVGGEGPVAVAVDVQSDFSMYKSGIYQS-ETCSTYYVNHAVLAVGYGTE 280

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVV 228
               YW+++NSWG    D+G+ +  R  NN CG   IA YA++ +V
Sbjct: 281 SGTDYWILKNSWGSWWGDQGYIRFARNRNNMCG---IASYASVPMV 323



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 138/272 (50%), Gaps = 21/272 (7%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRKKN 386
           G ++F+D + EE   K  F+ S ++        E +    +  +  G  VP++ DWR   
Sbjct: 68  GLNQFTDMTFEEFKAKYLFEISPKS--------ELLSHSGISYQAKGNDVPESIDWRDYG 119

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--L 444
                 DQ  CGSCWAFS  G +EGQY  K    V FS+ QLV+C +   G  GC+G  +
Sbjct: 120 YVTEVKDQGQCGSCWAFSSTGAMEGQYIKKFRTTVSFSEQQLVDCTRNY-GNSGCNGGWM 178

Query: 445 EQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILY 503
           E+  EY  + GLE+E  YPYR  +     C Y+    V   TG    +     ++  ++ 
Sbjct: 179 ERAFEYLRRNGLETESSYPYRAVDDH---CRYESQLGVAKVTGYYTEHSGNEVSLMNMVG 235

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GP++V ++         + I ++ ETCS Y + HAVL VGYG +    YW+ +NSWG 
Sbjct: 236 GEGPVAVAVDVQSDFSMYKSGIYQS-ETCSTYYVNHAVLAVGYGTESGTDYWILKNSWGS 294

Query: 564 IGPDEGFFKIERG-NNACGIEQIAGYATIDVV 594
              D+G+ +  R  NN CG   IA YA++ +V
Sbjct: 295 WWGDQGYIRFARNRNNMCG---IASYASVPMV 323


>gi|33622213|ref|NP_891858.1| cathepsin [Cryptophlebia leucotreta granulovirus]
 gi|33569322|gb|AAQ21608.1| cathepsin [Cryptophlebia leucotreta granulovirus]
          Length = 332

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 172/325 (52%), Gaps = 27/325 (8%)

Query: 638 VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--------KK 689
           V   +   S+ ++ E   + F +F+ +  + Y  +EE   +F+ FK +           K
Sbjct: 10  VSAFSFIESVIYNLEQSEKLFDSFVKQYNKTYLTEEERMIKFDNFKNNLRIINEKNRGSK 69

Query: 690 HERYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV--PDAW 746
           H  +  +++SD +  ++L   TGFK   +        +E     ++E++++  V  P+ +
Sbjct: 70  HAVFDINKYSDLNKNDLLRHTTGFKLGLKKNYSFTTVKEC---GVVEIKEEPQVLLPETF 126

Query: 747 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 806
           DWR K+   P  +Q  CGSCWAFS  G +E  Y IK  K+++ S+  L+ C    +GC+G
Sbjct: 127 DWRDKHGVTPVKNQLICGSCWAFSTIGNIESLYNIKYDKVIDLSEQHLINCDLVNNGCNG 186

Query: 807 CFFEPSIEYTHQ--AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMK 864
                ++E   Q   G+ SE++ PY    G    C     ++ +   K ++  N ++ +K
Sbjct: 187 GLMHWALENILQEGGGVVSEENDPYY---GLDSVCKKTPWELNISGCKRYILQNENK-LK 242

Query: 865 KILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNIPYWLV 922
           ++L   GP+SV ++ SD+I+  +G       + C   + L HAVLLVGYG+ D +PYW++
Sbjct: 243 ELLVVNGPISVAIDVSDVINYKSGIA-----DICENNNGLNHAVLLVGYGEYDEVPYWIL 297

Query: 923 RNSWGPIGPDEGFFKIERGNNACGI 947
           +NSWG    ++GFF+I+R  N+CG+
Sbjct: 298 KNSWGIEWGEDGFFRIQRNKNSCGL 322



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 30/327 (9%)

Query: 272 VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--------KK 323
           V   +   S+ ++ E   + F +F+ +  + Y  +EE   +F+ FK +           K
Sbjct: 10  VSAFSFIESVIYNLEQSEKLFDSFVKQYNKTYLTEEERMIKFDNFKNNLRIINEKNRGSK 69

Query: 324 HERYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV--PDAW 380
           H  +  +++SD +  ++L   TGFK   +        +E     ++E++++  V  P+ +
Sbjct: 70  HAVFDINKYSDLNKNDLLRHTTGFKLGLKKNYSFTTVKEC---GVVEIKEEPQVLLPETF 126

Query: 381 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG 440
           DWR K+   P  +Q  CGSCWAFS  G +E  Y IK  K+++ S+  L+ C    +GC G
Sbjct: 127 DWRDKHGVTPVKNQLICGSCWAFSTIGNIESLYNIKYDKVIDLSEQHLINCDLVNNGCNG 186

Query: 441 CDGLEQ-PIEYTHQ--AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET 497
             GL    +E   Q   G+ SE++ PY    G    C     ++ +   K ++  N ++ 
Sbjct: 187 --GLMHWALENILQEGGGVVSEENDPYY---GLDSVCKKTPWELNISGCKRYILQNENK- 240

Query: 498 MKKILYKYGPLSVGLN-SHLIHFYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDDIPYW 555
           +K++L   GP+SV ++ S +I++ +G       + C   + L HAVLLVGYG+ D++PYW
Sbjct: 241 LKELLVVNGPISVAIDVSDVINYKSGIA-----DICENNNGLNHAVLLVGYGEYDEVPYW 295

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGI 582
           + +NSWG    ++GFF+I+R  N+CG+
Sbjct: 296 ILKNSWGIEWGEDGFFRIQRNKNSCGL 322



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 13/210 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR K+   P  +Q  CGSCWAFS  G +E  Y IK  K+++ S+  L+ C    
Sbjct: 122 LPETFDWRDKHGVTPVKNQLICGSCWAFSTIGNIESLYNIKYDKVIDLSEQHLINCDLVN 181

Query: 71  SGCDGCFFEPSIEYTHQ--AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
           +GC+G     ++E   Q   G+ SE++ PY    G    C     ++ +   K ++  N 
Sbjct: 182 NGCNGGLMHWALENILQEGGGVVSEENDPYY---GLDSVCKKTPWELNISGCKRYILQNE 238

Query: 129 SETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNI 186
           ++ +K++L   GP+SV ++ SD+I+  +G       + C   + L HAVLLVGYG+ D +
Sbjct: 239 NK-LKELLVVNGPISVAIDVSDVINYKSGIA-----DICENNNGLNHAVLLVGYGEYDEV 292

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           PYW+++NSWG    ++GFF+I+R  N+CG+
Sbjct: 293 PYWILKNSWGIEWGEDGFFRIQRNKNSCGL 322



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 38/46 (82%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            L HAVLLVGYG+ D++PYW+++NSWG    ++GFF+I+R  N+CG+
Sbjct: 277  LNHAVLLVGYGEYDEVPYWILKNSWGIEWGEDGFFRIQRNKNSCGL 322


>gi|146335578|gb|ABQ23398.1| cathepsin L isotype 1 [Trypanoplasma borreli]
          Length = 443

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 154/336 (45%), Gaps = 25/336 (7%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-- 691
           V A +    + G+ T D     + F  F     R Y +  E ++RFE F  +  K  E  
Sbjct: 6   VTALLMVCTVMGAPTTD-----DLFSDFKATHARNYVSPGEERKRFEIFAANMKKAAELN 60

Query: 692 ------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDA 745
                  +G +EF+D S EE   +     + R Y    A R K  K   + E        
Sbjct: 61  RKNPMATFGPNEFADMSSEEFQTRHN---AARHYAAAKARRAKHTKSFTKEEIKAADGQK 117

Query: 746 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 805
            DWR K       +Q +CGSCW+FS  G +EGQ AI TG LV  S+ +LV C    +GC+
Sbjct: 118 IDWRLKGAVTSVKNQGSCGSCWSFSTTGNIEGQNAIATGNLVSLSEQELVSCDTTDNGCN 177

Query: 806 GCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSE 861
           G   + +  +   T    + +E  YPY + NG    C+Y+  +K    T  +F    G+E
Sbjct: 178 GGLMDNAFGWLISTRGGQIATEASYPYVSGNGIVPACSYNLDNKPVGATISNFQDITGTE 237

Query: 862 T-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
             M   ++ YGPLS+ +++     Y G  I      C    + H VL+VGY      PYW
Sbjct: 238 EDMAAFVFNYGPLSIGVDASTWQSYAGGIITY----CPDVQIDHGVLIVGYDDTAPTPYW 293

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           +++NSW     ++G+ ++ +G+N CG+      + +
Sbjct: 294 IIKNSWTANWGEDGYIRVAKGSNMCGLTSTPSSSVV 329



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 153/336 (45%), Gaps = 24/336 (7%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-- 325
           V A +    + G+ T D     + F  F     R Y +  E ++RFE F  +  K  E  
Sbjct: 6   VTALLMVCTVMGAPTTD-----DLFSDFKATHARNYVSPGEERKRFEIFAANMKKAAELN 60

Query: 326 ------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDA 379
                  +G +EF+D S EE   +     + R Y    A R K  K   + E        
Sbjct: 61  RKNPMATFGPNEFADMSSEEFQTRHN---AARHYAAAKARRAKHTKSFTKEEIKAADGQK 117

Query: 380 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCG 439
            DWR K       +Q +CGSCW+FS  G +EGQ AI TG LV  S+ +LV C    +GC 
Sbjct: 118 IDWRLKGAVTSVKNQGSCGSCWSFSTTGNIEGQNAIATGNLVSLSEQELVSCDTTDNGCN 177

Query: 440 G--CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLYFNGSE 496
           G   D     +  T    + +E  YPY +GNG    C+Y+  +K    T  +F    G+E
Sbjct: 178 GGLMDNAFGWLISTRGGQIATEASYPYVSGNGIVPACSYNLDNKPVGATISNFQDITGTE 237

Query: 497 T-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
             M   ++ YGPLS+G+++     Y G  I      C    + H VL+VGY      PYW
Sbjct: 238 EDMAAFVFNYGPLSIGVDASTWQSYAGGIITY----CPDVQIDHGVLIVGYDDTAPTPYW 293

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           + +NSW     ++G+ ++ +G+N CG+      + +
Sbjct: 294 IIKNSWTANWGEDGYIRVAKGSNMCGLTSTPSSSVV 329



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 9/215 (4%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR K       +Q  CGSCW+FS  G +EGQ AI TG LV  S+ +LV C    +GC+G
Sbjct: 119 DWRLKGAVTSVKNQGSCGSCWSFSTTGNIEGQNAIATGNLVSLSEQELVSCDTTDNGCNG 178

Query: 76  CFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSET 131
              + +  +   T    + +E  YPY + NG    C+Y+  +K    T  +F    G+E 
Sbjct: 179 GLMDNAFGWLISTRGGQIATEASYPYVSGNGIVPACSYNLDNKPVGATISNFQDITGTEE 238

Query: 132 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 190
            M   ++ YGPLS+ +++     Y G  I      C    + H VL+VGY      PYW+
Sbjct: 239 DMAAFVFNYGPLSIGVDASTWQSYAGGIITY----CPDVQIDHGVLIVGYDDTAPTPYWI 294

Query: 191 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           ++NSW     ++G+ ++ +G+N CG+      + +
Sbjct: 295 IKNSWTANWGEDGYIRVAKGSNMCGLTSTPSSSVV 329



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 33/60 (55%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    + H VL+VGY      PYW+++NSW     ++G+ ++ +G+N CG+      + +
Sbjct: 270  CPDVQIDHGVLIVGYDDTAPTPYWIIKNSWTANWGEDGYIRVAKGSNMCGLTSTPSSSVV 329


>gi|443685370|gb|ELT89004.1| hypothetical protein CAPTEDRAFT_95613, partial [Capitella teleta]
          Length = 295

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 149/302 (49%), Gaps = 21/302 (6%)

Query: 664 KRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEI-LCKTGFKWSERTYERI 722
           +R   + N+ +  +   Y  + G K     G ++FSD   +E      GF+ + RT    
Sbjct: 6   QRKEVFRNNIKKIQMHNYLHEQG-KSPFTMGINQFSDMDEKEFSTIMNGFRMNNRT---- 60

Query: 723 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 782
              R+ +    +       VP   DWRKK    P  +Q  CGSCWAFS  G LEGQ+  K
Sbjct: 61  -KVRDHLHSHYISPAIPVSVPAEVDWRKKGYVTPVKNQGQCGSCWAFSAIGALEGQHFRK 119

Query: 783 TGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKC 839
           TGKLV  S+  LV+C+K    +GC+G   + + +Y     G ++E  YPY+  +G    C
Sbjct: 120 TGKLVSLSEQNLVDCSKSYGNNGCNGGVMDYAFKYIKDNDGDDTEACYPYEAVDG---MC 176

Query: 840 AYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLL---NSDLIHDYNGTPIRKNDE 895
            + +  V     G   L +     MK+ +   GP+SV +   +S  +    G  + K   
Sbjct: 177 RFKRECVGATCRGYTDLPWGNEVKMKEAVALVGPVSVAIDASHSSFMSYKGGVYVEKE-- 234

Query: 896 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYA 954
            CSPY L H VL+VGYG +  + YWLV+NSWG    D+G+ K+ R  +N CGI  +A Y 
Sbjct: 235 -CSPYQLDHGVLVVGYGTEQGLDYWLVKNSWGTTWGDQGYIKMARNMHNHCGIASMACYP 293

Query: 955 TI 956
            +
Sbjct: 294 LV 295



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 148/303 (48%), Gaps = 22/303 (7%)

Query: 298 KRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEI-LCKTGFKWSERTYERI 356
           +R   + N+ +  +   Y  + G K     G ++FSD   +E      GF+ + RT    
Sbjct: 6   QRKEVFRNNIKKIQMHNYLHEQG-KSPFTMGINQFSDMDEKEFSTIMNGFRMNNRT---- 60

Query: 357 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 416
              R+ +    +       VP   DWRKK    P  +Q  CGSCWAFS  G LEGQ+  K
Sbjct: 61  -KVRDHLHSHYISPAIPVSVPAEVDWRKKGYVTPVKNQGQCGSCWAFSAIGALEGQHFRK 119

Query: 417 TGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFK 473
           TGKLV  S+  LV+C+K   G  GC+G  ++   +Y     G ++E  YPY   +G    
Sbjct: 120 TGKLVSLSEQNLVDCSKS-YGNNGCNGGVMDYAFKYIKDNDGDDTEACYPYEAVDG---M 175

Query: 474 CAYDKSKV-KLFTGKDFLYFNGSETMKKILYKYGPLSVGL---NSHLIHFYNGTPIRKND 529
           C + +  V     G   L +     MK+ +   GP+SV +   +S  + +  G  + K  
Sbjct: 176 CRFKRECVGATCRGYTDLPWGNEVKMKEAVALVGPVSVAIDASHSSFMSYKGGVYVEKE- 234

Query: 530 ETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 588
             CSPY L H VL+VGYG +  + YWL +NSWG    D+G+ K+ R  +N CGI  +A Y
Sbjct: 235 --CSPYQLDHGVLVVGYGTEQGLDYWLVKNSWGTTWGDQGYIKMARNMHNHCGIASMACY 292

Query: 589 ATI 591
             +
Sbjct: 293 PLV 295



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 120/223 (53%), Gaps = 14/223 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           VP   DWRKK    P  +Q  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+K  
Sbjct: 79  VPAEVDWRKKGYVTPVKNQGQCGSCWAFSAIGALEGQHFRKTGKLVSLSEQNLVDCSKSY 138

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHF 126
             +GC+G   + + +Y     G ++E  YPY+  +G    C + +  V     G   L +
Sbjct: 139 GNNGCNGGVMDYAFKYIKDNDGDDTEACYPYEAVDG---MCRFKRECVGATCRGYTDLPW 195

Query: 127 NGSETMKKILYKYGPLSVLL---NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
                MK+ +   GP+SV +   +S  +    G  + K    CSPY L H VL+VGYG +
Sbjct: 196 GNEVKMKEAVALVGPVSVAIDASHSSFMSYKGGVYVEKE---CSPYQLDHGVLVVGYGTE 252

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             + YWLV+NSWG    D+G+ K+ R  +N CGI  +A Y  +
Sbjct: 253 QGLDYWLVKNSWGTTWGDQGYIKMARNMHNHCGIASMACYPLV 295



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            ++ CSPY L H VL+VGYG +  + YWLV+NSWG    D+G+ K+ R  +N CGI  +A 
Sbjct: 232  EKECSPYQLDHGVLVVGYGTEQGLDYWLVKNSWGTTWGDQGYIKMARNMHNHCGIASMAC 291

Query: 1021 YATI 1024
            Y  +
Sbjct: 292  YPLV 295


>gi|440792185|gb|ELR13413.1| cathepsin L, putative [Acanthamoeba castellanii str. Neff]
          Length = 331

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 151/322 (46%), Gaps = 39/322 (12%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPE 704
           I E F AF+ + G+ YA+ EE ++RF  F Q+          ++   ++G ++F+D S E
Sbjct: 30  IREQFNAFVQRYGKSYASAEEAEQRFAIFTQNLAETAALNIKYEGKTQFGITKFADMSQE 89

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP------VPDAWDWRKK-NVTGPA 757
           E               R++           E    GP       P  +DWR K  V  P 
Sbjct: 90  EFQ------------SRVL--MSNPPPPPTEKPYRGPKFEGFTAPSTFDWRNKPGVVTPV 135

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH 817
            DQ  CGSCWAFS    +E Q+A+   KL   S  Q+V+C+    GC G F   + +Y  
Sbjct: 136 YDQGQCGSCWAFSATENIESQWALAGHKLTGLSMQQIVDCSWWDDGCGGGFPSYAYDYVI 195

Query: 818 QA-GLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHFNGSETMKKILYKYGPLS 874
            A GL++  +YPY    G    CA+ +S+V  K+ +       +    M   L ++GP+S
Sbjct: 196 DAPGLDALANYPYTAVGG---SCAFKESQVVAKISSWTYTTTDSNEHQMANYLAQHGPIS 252

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEG 934
           V ++++    Y G   R +   C    + H VL VGY    N PYW++RNSWG     EG
Sbjct: 253 VCVDAESWPSYTGGVYRAS--ACGT-SIDHCVLAVGYNLTANPPYWIIRNSWGTSWGLEG 309

Query: 935 FFKIERGNNACGIEQIAGYATI 956
           +  +E G +AC + ++   A I
Sbjct: 310 YMHLEFGTDACAVAEMTTSAII 331



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 149/324 (45%), Gaps = 42/324 (12%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPE 338
           I E F AF+ + G+ YA+ EE ++RF  F Q+          ++   ++G ++F+D S E
Sbjct: 30  IREQFNAFVQRYGKSYASAEEAEQRFAIFTQNLAETAALNIKYEGKTQFGITKFADMSQE 89

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP------VPDAWDWRKK-NVTGPA 391
           E               R++           E    GP       P  +DWR K  V  P 
Sbjct: 90  EFQ------------SRVL--MSNPPPPPTEKPYRGPKFEGFTAPSTFDWRNKPGVVTPV 135

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ-PIEY 450
            DQ  CGSCWAFS    +E Q+A+   KL   S  Q+V+C+    GCGG  G      +Y
Sbjct: 136 YDQGQCGSCWAFSATENIESQWALAGHKLTGLSMQQIVDCSWWDDGCGG--GFPSYAYDY 193

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKV--KLFTGKDFLYFNGSETMKKILYKYGP 507
              A GL++  +YPY    G    CA+ +S+V  K+ +       +    M   L ++GP
Sbjct: 194 VIDAPGLDALANYPYTAVGG---SCAFKESQVVAKISSWTYTTTDSNEHQMANYLAQHGP 250

Query: 508 LSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPD 567
           +SV +++     Y G   R +   C    + H VL VGY    + PYW+ RNSWG     
Sbjct: 251 ISVCVDAESWPSYTGGVYRAS--ACGT-SIDHCVLAVGYNLTANPPYWIIRNSWGTSWGL 307

Query: 568 EGFFKIERGNNACGIEQIAGYATI 591
           EG+  +E G +AC + ++   A I
Sbjct: 308 EGYMHLEFGTDACAVAEMTTSAII 331



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 111/219 (50%), Gaps = 10/219 (4%)

Query: 11  VPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
            P  +DWR K  V  P  DQ  CGSCWAFS    +E Q+A+   KL   S  Q+V+C+  
Sbjct: 119 APSTFDWRNKPGVVTPVYDQGQCGSCWAFSATENIESQWALAGHKLTGLSMQQIVDCSWW 178

Query: 70  CSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHF 126
             GC G F   + +Y   A GL++  +YPY    G    CA+ +S+V  K+ +       
Sbjct: 179 DDGCGGGFPSYAYDYVIDAPGLDALANYPYTAVGG---SCAFKESQVVAKISSWTYTTTD 235

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           +    M   L ++GP+SV ++++    Y G   R +   C    + H VL VGY    N 
Sbjct: 236 SNEHQMANYLAQHGPISVCVDAESWPSYTGGVYRAS--ACGT-SIDHCVLAVGYNLTANP 292

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           PYW++RNSWG     EG+  +E G +AC + ++   A I
Sbjct: 293 PYWIIRNSWGTSWGLEGYMHLEFGTDACAVAEMTTSAII 331



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
             + H VL VGY    + PYW++RNSWG     EG+  +E G +AC + ++   A I
Sbjct: 276  SIDHCVLAVGYNLTANPPYWIIRNSWGTSWGLEGYMHLEFGTDACAVAEMTTSAII 331


>gi|167427529|gb|ABZ80401.1| cathepsin L4, partial [Fasciola hepatica]
          Length = 303

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 120/226 (53%), Gaps = 12/226 (5%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
            D  VP++ DWR+        DQ DCGSCWAFS  G +EGQY       + FS+ QLV+C
Sbjct: 81  NDRAVPESIDWREFGYVTEVKDQGDCGSCWAFSTTGAVEGQYMKNPKANISFSEQQLVDC 140

Query: 67  AKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +      GC+G F E + EY  + GLE+E  YPYK    E+  C YD     +     F+
Sbjct: 141 SGDYGNHGCNGGFMENAYEYLERRGLETESSYPYK---AEEGPCKYDSRLGVVEVFGYFI 197

Query: 125 HFNGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
             +G E+ +  ++   GP +V ++  SD +    G    +N   CS   L HA+L+VGYG
Sbjct: 198 EHSGIESKLAHLVGDKGPAAVAVDVESDFLMYRGGIYASRN---CSSEKLNHAMLVVGYG 254

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATID 226
            QD   YW+V+NSWG +  D G+ ++ R  +N CGI   A    ++
Sbjct: 255 TQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCGIASAASVPVVE 300



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 123/229 (53%), Gaps = 15/229 (6%)

Query: 738 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 797
            D  VP++ DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C
Sbjct: 81  NDRAVPESIDWREFGYVTEVKDQGDCGSCWAFSTTGAVEGQYMKNPKANISFSEQQLVDC 140

Query: 798 AKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
           +      GC+G F E + EY  + GLE+E  YPYK    E+  C YD     +     F+
Sbjct: 141 SGDYGNHGCNGGFMENAYEYLERRGLETESSYPYK---AEEGPCKYDSRLGVVEVFGYFI 197

Query: 856 HFNGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 912
             +G E+ +  ++   GP +V ++  SD +    G    +N   CS   L HA+L+VGYG
Sbjct: 198 EHSGIESKLAHLVGDKGPAAVAVDVESDFLMYRGGIYASRN---CSSEKLNHAMLVVGYG 254

Query: 913 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVVK 960
            QD   YW+V+NSWG +  D G+ ++ R  +N CG   IA  A++ VV+
Sbjct: 255 TQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCG---IASAASVPVVE 300



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 118/227 (51%), Gaps = 13/227 (5%)

Query: 372 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 431
            D  VP++ DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C
Sbjct: 81  NDRAVPESIDWREFGYVTEVKDQGDCGSCWAFSTTGAVEGQYMKNPKANISFSEQQLVDC 140

Query: 432 AKQCSGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF 489
           +    G  GC+G  +E   EY  + GLE+E  YPY+    E+  C YD     +     F
Sbjct: 141 SGD-YGNHGCNGGFMENAYEYLERRGLETESSYPYK---AEEGPCKYDSRLGVVEVFGYF 196

Query: 490 LYFNGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGY 546
           +  +G E+ +  ++   GP +V ++  S  + +  G    +N   CS   L HA+L+VGY
Sbjct: 197 IEHSGIESKLAHLVGDKGPAAVAVDVESDFLMYRGGIYASRN---CSSEKLNHAMLVVGY 253

Query: 547 GKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATID 592
           G QD   YW+ +NSWG +  D G+ ++ R  +N CGI   A    ++
Sbjct: 254 GTQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCGIASAASVPVVE 300



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYA 1022
             CS   L HA+L+VGYG QD   YW+V+NSWG +  D G+ ++ R  +N CGI   A   
Sbjct: 238  NCSSEKLNHAMLVVGYGTQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCGIASAASVP 297

Query: 1023 TID 1025
             ++
Sbjct: 298  VVE 300


>gi|229596403|ref|XP_001009843.3| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|225565321|gb|EAR89598.3| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 324

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/304 (34%), Positives = 147/304 (48%), Gaps = 32/304 (10%)

Query: 655 LETFKAFIVKRGRQYANDEEIKERFEYFKQDG----HKKHERYGTSEFSDRSPEEILCKT 710
           ++ F+A++ K G ++A++ +++ R   F Q+         E  GT  F   +   I  K 
Sbjct: 33  VDEFQAWMHKYGFKFADEVQLQYRRSIFYQNKDLVEQLNSENNGT--FHTLNAFAIYTKD 90

Query: 711 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 770
            F    + Y+       K +K  +     G V  + DWR+KN   P  +Q  CGSCWAFS
Sbjct: 91  EFNQLFKGYQ-------KRQKSHLIYSLKGDVAPSIDWRQKNAVTPVKNQGQCGSCWAFS 143

Query: 771 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYK 830
             G LEG YAI TG L  FS+ Q+V+C+K  +GC+G    P+ +Y  Q G+E+E DYPYK
Sbjct: 144 TVGGLEGAYAIATGNLTSFSEQQIVDCSKANAGCNGGDLPPAYKYVVQNGIETEADYPYK 203

Query: 831 NANGEKFKCAYDKSKVKLFTGKDFLHFN-GSETMKKILYKYGPLSVLLNSD--LIHDYNG 887
             N    KCAYD SKV +F  K F+     S     I     P+ + + +D      Y  
Sbjct: 204 GVNQ---KCAYDASKV-VFKPKSFVQVTPNSPDQLAIALNKEPVPICIEADQKAFQFYTS 259

Query: 888 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER----GNN 943
             I     T    +L H VL VGY        W+V+NSWG    + G+ +I R    G  
Sbjct: 260 GIISSGCGT----NLDHCVLAVGYDADS----WIVKNSWGASWGENGYVRIARTTAKGPG 311

Query: 944 ACGI 947
            CGI
Sbjct: 312 VCGI 315



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 148/305 (48%), Gaps = 33/305 (10%)

Query: 289 LETFKAFIVKRGRQYANDEEIKERFEYFKQDG----HKKHERYGTSEFSDRSPEEILCKT 344
           ++ F+A++ K G ++A++ +++ R   F Q+         E  GT  F   +   I  K 
Sbjct: 33  VDEFQAWMHKYGFKFADEVQLQYRRSIFYQNKDLVEQLNSENNGT--FHTLNAFAIYTKD 90

Query: 345 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 404
            F    + Y+       K +K  +     G V  + DWR+KN   P  +Q  CGSCWAFS
Sbjct: 91  EFNQLFKGYQ-------KRQKSHLIYSLKGDVAPSIDWRQKNAVTPVKNQGQCGSCWAFS 143

Query: 405 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPY 464
             G LEG YAI TG L  FS+ Q+V+C+K  +GC G D L    +Y  Q G+E+E DYPY
Sbjct: 144 TVGGLEGAYAIATGNLTSFSEQQIVDCSKANAGCNGGD-LPPAYKYVVQNGIETEADYPY 202

Query: 465 RNGNGEKFKCAYDKSKVKLFTGKDFLYF--NGSETMKKILYKYG-PLSVGLNSHLIHFYN 521
           +   G   KCAYD SKV +F  K F+    N  + +   L K   P+ +  +     FY 
Sbjct: 203 K---GVNQKCAYDASKV-VFKPKSFVQVTPNSPDQLAIALNKEPVPICIEADQKAFQFYT 258

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER----GN 577
              I     T    +L H VL VGY    D   W+ +NSWG    + G+ +I R    G 
Sbjct: 259 SGIISSGCGT----NLDHCVLAVGY----DADSWIVKNSWGASWGENGYVRIARTTAKGP 310

Query: 578 NACGI 582
             CGI
Sbjct: 311 GVCGI 315



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 111/215 (51%), Gaps = 19/215 (8%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G V  + DWR+KN   P  +Q  CGSCWAFS  G LEG YAI TG L  FS+ Q+V+C+K
Sbjct: 113 GDVAPSIDWRQKNAVTPVKNQGQCGSCWAFSTVGGLEGAYAIATGNLTSFSEQQIVDCSK 172

Query: 69  QCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN- 127
             +GC+G    P+ +Y  Q G+E+E DYPYK  N    KCAYD SKV +F  K F+    
Sbjct: 173 ANAGCNGGDLPPAYKYVVQNGIETEADYPYKGVNQ---KCAYDASKV-VFKPKSFVQVTP 228

Query: 128 GSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            S     I     P+ + + +D      Y    I     T    +L H VL VGY     
Sbjct: 229 NSPDQLAIALNKEPVPICIEADQKAFQFYTSGIISSGCGT----NLDHCVLAVGYDADS- 283

Query: 186 IPYWLVRNSWGPIGPDEGFFKIER----GNNACGI 216
              W+V+NSWG    + G+ +I R    G   CGI
Sbjct: 284 ---WIVKNSWGASWGENGYVRIARTTAKGPGVCGI 315


>gi|334347644|ref|XP_001379528.2| PREDICTED: cathepsin W-like [Monodelphis domestica]
          Length = 619

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 647 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKH---ERYGTSE 697
           L    +++++ FKAF ++  + YA+  E + RFE F       Q   +KH    ++G ++
Sbjct: 255 LPPATQDLMDQFKAFQIQYNKSYADPAEQERRFEIFADNLAWAQQLTEKHGGMAQFGVTQ 314

Query: 698 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 757
           FSD + EE      ++ ++ +Y+       K  ++        P+  + DWRK  V  P 
Sbjct: 315 FSDLTEEEF--HQHYQPAQSSYKEPSLKTRKHPRL------QRPLIRSCDWRKAGVLTPV 366

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYT 816
             Q  C SCWA +  G +E  +AI   +  E S  ++++C +    C G F ++  +   
Sbjct: 367 RKQKKCRSCWAIAAVGNVEALWAIHYEQHFELSVQEVLDCDRCGKACKGGFVWDAFLTIL 426

Query: 817 HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSV 875
            Q GL  E+DYPY++    K  C   +++      +DFL     E  M + L   GP++V
Sbjct: 427 RQRGLARERDYPYQDQLSRK-GCQKKQNRTGWI--QDFLMLPKEENAMAEHLALKGPITV 483

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DNIPYWLVRNSWGPIGPDEG 934
            +N  L+  Y    IR  D+ C P  + H+VLLVG+G+   +  YW+++NSWG    +EG
Sbjct: 484 TINQALLKTYRKGVIRPKDD-CDPNQVDHSVLLVGFGQNTKDGAYWILKNSWGSDWGEEG 542

Query: 935 FFKIERGNNACGI 947
           +F++ RG NACGI
Sbjct: 543 YFRLRRGTNACGI 555



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 23/313 (7%)

Query: 281 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKH---ERYGTSE 331
           L    +++++ FKAF ++  + YA+  E + RFE F       Q   +KH    ++G ++
Sbjct: 255 LPPATQDLMDQFKAFQIQYNKSYADPAEQERRFEIFADNLAWAQQLTEKHGGMAQFGVTQ 314

Query: 332 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 391
           FSD + EE      ++ ++ +Y+       K  ++        P+  + DWRK  V  P 
Sbjct: 315 FSDLTEEEF--HQHYQPAQSSYKEPSLKTRKHPRL------QRPLIRSCDWRKAGVLTPV 366

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT 451
             Q  C SCWA +  G +E  +AI   +  E S  ++++C +    C G    +  +   
Sbjct: 367 RKQKKCRSCWAIAAVGNVEALWAIHYEQHFELSVQEVLDCDRCGKACKGGFVWDAFLTIL 426

Query: 452 HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSV 510
            Q GL  E+DYPY++    K  C   +++      +DFL     E  M + L   GP++V
Sbjct: 427 RQRGLARERDYPYQDQLSRK-GCQKKQNRTGWI--QDFLMLPKEENAMAEHLALKGPITV 483

Query: 511 GLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DDIPYWLARNSWGPIGPDEG 569
            +N  L+  Y    IR  D+ C P  + H+VLLVG+G+   D  YW+ +NSWG    +EG
Sbjct: 484 TINQALLKTYRKGVIRPKDD-CDPNQVDHSVLLVGFGQNTKDGAYWILKNSWGSDWGEEG 542

Query: 570 FFKIERGNNACGI 582
           +F++ RG NACGI
Sbjct: 543 YFRLRRGTNACGI 555



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 109/204 (53%), Gaps = 7/204 (3%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWRK  V  P   Q  C SCWA +  G +E  +AI   +  E S  ++++C +    C G
Sbjct: 356 DWRKAGVLTPVRKQKKCRSCWAIAAVGNVEALWAIHYEQHFELSVQEVLDCDRCGKACKG 415

Query: 76  CF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMK 133
            F ++  +    Q GL  E+DYPY++    K  C   +++      +DFL     E  M 
Sbjct: 416 GFVWDAFLTILRQRGLARERDYPYQDQLSRK-GCQKKQNRTGWI--QDFLMLPKEENAMA 472

Query: 134 KILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DNIPYWLVR 192
           + L   GP++V +N  L+  Y    IR  D+ C P  + H+VLLVG+G+   +  YW+++
Sbjct: 473 EHLALKGPITVTINQALLKTYRKGVIRPKDD-CDPNQVDHSVLLVGFGQNTKDGAYWILK 531

Query: 193 NSWGPIGPDEGFFKIERGNNACGI 216
           NSWG    +EG+F++ RG NACGI
Sbjct: 532 NSWGSDWGEEGYFRLRRGTNACGI 555



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 958  VVKNDETCSPYDLGHAVLLVGYGKQ-DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            V++  + C P  + H+VLLVG+G+   D  YW+++NSWG    +EG+F++ RG NACGI
Sbjct: 497  VIRPKDDCDPNQVDHSVLLVGFGQNTKDGAYWILKNSWGSDWGEEGYFRLRRGTNACGI 555


>gi|340380715|ref|XP_003388867.1| PREDICTED: pro-cathepsin H-like [Amphimedon queenslandica]
          Length = 347

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 152/322 (47%), Gaps = 39/322 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 342
           F+ + +K  + YA  EE   R   +           +GH     +  ++F+D +  E   
Sbjct: 43  FERWTIKHKKTYATAEEYNWRLRVYTANHYYVKRLNEGHGPATEFELNQFADLTFAEF-- 100

Query: 343 KTGFKWSERTYERIVAD--REKVEKMLMEVEKDGPV-PDAWDWRKKNVTGPAGDQAACGS 399
                  +R Y    +   R       M V+K+    P A DWRK+NV  P  DQ +CGS
Sbjct: 101 -------KRIYLSSSSQHCRATTGNFQMPVKKNNVEDPVAIDWRKRNVITPVRDQGSCGS 153

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLE 457
           CWAFS    L    A+KTG+L+  SK QL++C++  +  G   GL  Q  EY  +  G+E
Sbjct: 154 CWAFSATSCLSAHLALKTGQLISLSKQQLLDCSRSFNNRGCKGGLPSQAFEYIRYNGGIE 213

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-- 514
           SE+DYPY++    + KC +  S V         +  G+E  +   L   GP+S+G++S  
Sbjct: 214 SERDYPYKD---REEKCHFKPSLVAATVTGVVNFTQGAEDDIAVALANIGPVSIGIHSTK 270

Query: 515 ----HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEG 569
               +    Y G    KN     P  + HAVL+VGY +      YW+ +NSWG      G
Sbjct: 271 SFATYKKGIYQGKLCSKN-----PRKINHAVLIVGYDQTASGEKYWIGKNSWGTNWGMNG 325

Query: 570 FFKIERGNNACGIEQIAGYATI 591
           +F I RG+NACG+   A Y  +
Sbjct: 326 YFWIRRGHNACGLATCASYPVV 347



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 150/322 (46%), Gaps = 40/322 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 708
           F+ + +K  + YA  EE   R   +           +GH     +  ++F+D +  E   
Sbjct: 43  FERWTIKHKKTYATAEEYNWRLRVYTANHYYVKRLNEGHGPATEFELNQFADLTFAEF-- 100

Query: 709 KTGFKWSERTYERIVAD--REKVEKMLMEVEKDGPV-PDAWDWRKKNVTGPAGDQAACGS 765
                  +R Y    +   R       M V+K+    P A DWRK+NV  P  DQ +CGS
Sbjct: 101 -------KRIYLSSSSQHCRATTGNFQMPVKKNNVEDPVAIDWRKRNVITPVRDQGSCGS 153

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLE 822
           CWAFS    L    A+KTG+L+  SK QL++C++  +  GC G     + EY  +  G+E
Sbjct: 154 CWAFSATSCLSAHLALKTGQLISLSKQQLLDCSRSFNNRGCKGGLPSQAFEYIRYNGGIE 213

Query: 823 SEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 881
           SE+DYPYK+    + KC +  S V    TG         + +   L   GP+S+ ++S  
Sbjct: 214 SERDYPYKD---REEKCHFKPSLVAATVTGVVNFTQGAEDDIAVALANIGPVSIGIHSTK 270

Query: 882 IHD------YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEG 934
                    Y G    KN     P  + HAVL+VGY +  +   YW+ +NSWG      G
Sbjct: 271 SFATYKKGIYQGKLCSKN-----PRKINHAVLIVGYDQTASGEKYWIGKNSWGTNWGMNG 325

Query: 935 FFKIERGNNACGIEQIAGYATI 956
           +F I RG+NACG+   A Y  +
Sbjct: 326 YFWIRRGHNACGLATCASYPVV 347



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 116/225 (51%), Gaps = 19/225 (8%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P A DWRK+NV  P  DQ  CGSCWAFS    L    A+KTG+L+  SK QL++C++  +
Sbjct: 131 PVAIDWRKRNVITPVRDQGSCGSCWAFSATSCLSAHLALKTGQLISLSKQQLLDCSRSFN 190

Query: 72  --GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFN 127
             GC G     + EY  +  G+ESE+DYPYK+    + KC +  S V    TG       
Sbjct: 191 NRGCKGGLPSQAFEYIRYNGGIESERDYPYKD---REEKCHFKPSLVAATVTGVVNFTQG 247

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHD------YNGTPIRKNDETCSPYDLGHAVLLVGYG 181
             + +   L   GP+S+ ++S           Y G    KN     P  + HAVL+VGY 
Sbjct: 248 AEDDIAVALANIGPVSIGIHSTKSFATYKKGIYQGKLCSKN-----PRKINHAVLIVGYD 302

Query: 182 KQDN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +  +   YW+ +NSWG      G+F I RG+NACG+   A Y  +
Sbjct: 303 QTASGEKYWIGKNSWGTNWGMNGYFWIRRGHNACGLATCASYPVV 347



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 941  GNNACGIEQIAGYATIDV-VKNDETCS--PYDLGHAVLLVGYGKQDD-IPYWLVRNSWGP 996
            G  + GI     +AT    +   + CS  P  + HAVL+VGY +      YW+ +NSWG 
Sbjct: 260  GPVSIGIHSTKSFATYKKGIYQGKLCSKNPRKINHAVLIVGYDQTASGEKYWIGKNSWGT 319

Query: 997  IGPDEGFFKIERGNNACGIEQIAGYATI 1024
                 G+F I RG+NACG+   A Y  +
Sbjct: 320  NWGMNGYFWIRRGHNACGLATCASYPVV 347


>gi|17569349|ref|NP_509408.1| Protein R09F10.1 [Caenorhabditis elegans]
 gi|351061560|emb|CCD69414.1| Protein R09F10.1 [Caenorhabditis elegans]
          Length = 383

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 155/303 (51%), Gaps = 20/303 (6%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEIL 707
           + F  FI+K  R+Y + EE + R++ F ++      + ER        +EF+D + EE+ 
Sbjct: 80  QMFNDFILKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQ 139

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV-PDAWDWRKKNVTGPAGDQAACGSC 766
                   E  Y +   D  K E   +E    G + P + DWR++    P  +Q  CGSC
Sbjct: 140 KMV----QENKYTKYDFDTPKFEGSYLET---GVIRPASIDWREQGKLTPIKNQGQCGSC 192

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKD 826
           WAF+    +E Q AIK GKLV  S+ ++V+C  + +GC G +   ++++  + GLESEK+
Sbjct: 193 WAFATVASVEAQNAIKKGKLVSLSEQEMVDCDGRNNGCSGGYRPYAMKFVKENGLESEKE 252

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDY 885
           YPY     +  +C   ++  ++F     +  N  E +   +   GP++  +N    ++ Y
Sbjct: 253 YPYSALKHD--QCFLKENDTRVFIDDFRMLSNNEEDIANWVGTKGPVTFGMNVVKAMYSY 310

Query: 886 NGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
                  + E C+   +G HA+ ++GYG +    YW+V+NSWG      G+F++ RG N+
Sbjct: 311 RSGIFNPSVEDCTEKSMGAHALTIIGYGGEGESAYWIVKNSWGTSWGASGYFRLARGVNS 370

Query: 945 CGI 947
           CG+
Sbjct: 371 CGL 373



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 21/304 (6%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEIL 341
           + F  FI+K  R+Y + EE + R++ F ++      + ER        +EF+D + EE+ 
Sbjct: 80  QMFNDFILKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQ 139

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV-PDAWDWRKKNVTGPAGDQAACGSC 400
                   E  Y +   D  K E   +E    G + P + DWR++    P  +Q  CGSC
Sbjct: 140 KMV----QENKYTKYDFDTPKFEGSYLET---GVIRPASIDWREQGKLTPIKNQGQCGSC 192

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEK 460
           WAF+    +E Q AIK GKLV  S+ ++V+C  + +GC G       +++  + GLESEK
Sbjct: 193 WAFATVASVEAQNAIKKGKLVSLSEQEMVDCDGRNNGCSG-GYRPYAMKFVKENGLESEK 251

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN-SHLIHF 519
           +YPY     +  +C   ++  ++F     +  N  E +   +   GP++ G+N    ++ 
Sbjct: 252 EYPYSALKHD--QCFLKENDTRVFIDDFRMLSNNEEDIANWVGTKGPVTFGMNVVKAMYS 309

Query: 520 YNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           Y       + E C+   +G HA+ ++GYG + +  YW+ +NSWG      G+F++ RG N
Sbjct: 310 YRSGIFNPSVEDCTEKSMGAHALTIIGYGGEGESAYWIVKNSWGTSWGASGYFRLARGVN 369

Query: 579 ACGI 582
           +CG+
Sbjct: 370 SCGL 373



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 114/207 (55%), Gaps = 4/207 (1%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P + DWR++    P  +Q  CGSCWAF+    +E Q AIK GKLV  S+ ++V+C  + +
Sbjct: 169 PASIDWREQGKLTPIKNQGQCGSCWAFATVASVEAQNAIKKGKLVSLSEQEMVDCDGRNN 228

Query: 72  GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           GC G +   ++++  + GLESEK+YPY     +  +C   ++  ++F     +  N  E 
Sbjct: 229 GCSGGYRPYAMKFVKENGLESEKEYPYSALKHD--QCFLKENDTRVFIDDFRMLSNNEED 286

Query: 132 MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYW 189
           +   +   GP++  +N    ++ Y       + E C+   +G HA+ ++GYG +    YW
Sbjct: 287 IANWVGTKGPVTFGMNVVKAMYSYRSGIFNPSVEDCTEKSMGAHALTIIGYGGEGESAYW 346

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGI 216
           +V+NSWG      G+F++ RG N+CG+
Sbjct: 347 IVKNSWGTSWGASGYFRLARGVNSCGL 373



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 963  ETCSPYDLG-HAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            E C+   +G HA+ ++GYG + +  YW+V+NSWG      G+F++ RG N+CG+
Sbjct: 320  EDCTEKSMGAHALTIIGYGGEGESAYWIVKNSWGTSWGASGYFRLARGVNSCGL 373


>gi|34811401|pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F
 gi|34811402|pdb|1M6D|B Chain B, Crystal Structure Of Human Cathepsin F
          Length = 214

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 3/217 (1%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 1   APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 60

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
             C G           +  GLE+E DY Y+   G    C +   K K++           
Sbjct: 61  KACMGGLPSNAYSAIKNLGGLETEDDYSYQ---GHMQSCQFSAEKAKVYIQDSVELSQNE 117

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           + +   L K GP+SV +N+  + FY     R     CSP+ + HAVLLVGYG++ D+P+W
Sbjct: 118 QKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQRSDVPFW 177

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
             +NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 178 AIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 214



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 118/219 (53%), Gaps = 8/219 (3%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 1   APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 60

Query: 802 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 61  KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCQFSAEKAKVYIQDSVELSQ 115

Query: 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG++ ++P
Sbjct: 116 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQRSDVP 175

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 176 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 214



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 118/219 (53%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P  WDWR K       DQ  CGSCWAFS+ G +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 1   APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD 60

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 61  KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCQFSAEKAKVYIQDSVELSQ 115

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG++ ++P
Sbjct: 116 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQRSDVP 175

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 176 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 214



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 45/61 (73%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            CSP+ + HAVLLVGYG++ D+P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +
Sbjct: 154  CSPWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213

Query: 1025 D 1025
            D
Sbjct: 214  D 214


>gi|348565006|ref|XP_003468295.1| PREDICTED: cathepsin W-like [Cavia porcellus]
          Length = 375

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 154/332 (46%), Gaps = 37/332 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQD----GHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y+N  E   R + F  +       + E  GT+EF     SD + EE 
Sbjct: 40  EVFKLFQIQFNRSYSNQAEYARRLDIFVHNLATAQRLQEEELGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
               G  +  R   R+     +V + +   +++  +  + DWRK ++  P  +Q  C  C
Sbjct: 100 ----GQLYGNR---RVARKDLRVARKVSFDKQEELMSQSCDWRKAHIISPVKNQGNCRCC 152

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEK 460
           WA + AG +E  + I+    V  S  +L++CA+   GC G    +  I   + +GL SEK
Sbjct: 153 WAIAAAGNIEAMWNIRYKVSVTLSVQELLDCARCEDGCAGGYIWDAFITVLNYSGLASEK 212

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFY 520
           DYP+R G+    KC     +   +     +     + + + +   GP++V +NS ++  Y
Sbjct: 213 DYPFR-GHANIHKCLASNYRKVAWIYDYIMLPRDEQGIARYVATQGPITVIINSKILQHY 271

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDDIPYWLARNS 560
               I+     C P+ + H VLLVGYG+                    +  IPYW+ +NS
Sbjct: 272 KKGIIKGTSSKCDPWFVDHYVLLVGYGRSKAEEEKWTETDLSHSNRPPRHSIPYWILKNS 331

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           WG    +EG+F++ RG+N CGI +    A +D
Sbjct: 332 WGANWGEEGYFRLHRGSNTCGITKYPITARVD 363



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 162/344 (47%), Gaps = 40/344 (11%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQD----GHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y+N  E   R + F  +       + E  GT+EF     SD + EE 
Sbjct: 40  EVFKLFQIQFNRSYSNQAEYARRLDIFVHNLATAQRLQEEELGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
               G  +  R   R+     +V + +   +++  +  + DWRK ++  P  +Q  C  C
Sbjct: 100 ----GQLYGNR---RVARKDLRVARKVSFDKQEELMSQSCDWRKAHIISPVKNQGNCRCC 152

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEK 825
           WA + AG +E  + I+    V  S  +L++CA+   GC G + ++  I   + +GL SEK
Sbjct: 153 WAIAAAGNIEAMWNIRYKVSVTLSVQELLDCARCEDGCAGGYIWDAFITVLNYSGLASEK 212

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DYP++  +    KC     +   +     +     + + + +   GP++V++NS ++  Y
Sbjct: 213 DYPFR-GHANIHKCLASNYRKVAWIYDYIMLPRDEQGIARYVATQGPITVIINSKILQHY 271

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDNIPYWLVRNS 925
               I+     C P+ + H VLLVGYG+                    + +IPYW+++NS
Sbjct: 272 KKGIIKGTSSKCDPWFVDHYVLLVGYGRSKAEEEKWTETDLSHSNRPPRHSIPYWILKNS 331

Query: 926 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVKNDE--TCSP 967
           WG    +EG+F++ RG+N CGI +    A +D     +  +C P
Sbjct: 332 WGANWGEEGYFRLHRGSNTCGITKYPITARVDNSAKQQPVSCPP 375



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 118/232 (50%), Gaps = 22/232 (9%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWRK ++  P  +Q +C  CWA + AG +E  + I+    V  S  +L++CA+   GC G
Sbjct: 133 DWRKAHIISPVKNQGNCRCCWAIAAAGNIEAMWNIRYKVSVTLSVQELLDCARCEDGCAG 192

Query: 76  CF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKK 134
            + ++  I   + +GL SEKDYP++  +    KC     +   +     +     + + +
Sbjct: 193 GYIWDAFITVLNYSGLASEKDYPFR-GHANIHKCLASNYRKVAWIYDYIMLPRDEQGIAR 251

Query: 135 ILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------------ 182
            +   GP++V++NS ++  Y    I+     C P+ + H VLLVGYG+            
Sbjct: 252 YVATQGPITVIINSKILQHYKKGIIKGTSSKCDPWFVDHYVLLVGYGRSKAEEEKWTETD 311

Query: 183 --------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
                   + +IPYW+++NSWG    +EG+F++ RG+N CGI +    A +D
Sbjct: 312 LSHSNRPPRHSIPYWILKNSWGANWGEEGYFRLHRGSNTCGITKYPITARVD 363



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 20/81 (24%)

Query: 965  CSPYDLGHAVLLVGYGK--------------------QDDIPYWLVRNSWGPIGPDEGFF 1004
            C P+ + H VLLVGYG+                    +  IPYW+++NSWG    +EG+F
Sbjct: 283  CDPWFVDHYVLLVGYGRSKAEEEKWTETDLSHSNRPPRHSIPYWILKNSWGANWGEEGYF 342

Query: 1005 KIERGNNACGIEQIAGYATID 1025
            ++ RG+N CGI +    A +D
Sbjct: 343  RLHRGSNTCGITKYPITARVD 363


>gi|49456399|emb|CAG46520.1| CTSK [Homo sapiens]
          Length = 329

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 156/328 (47%), Gaps = 28/328 (8%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 695
           SL    E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SLALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 696 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
              +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKK 124

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 812 SIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYK 869
           + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + +
Sbjct: 185 AFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 241

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG  
Sbjct: 242 VGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGEN 301

Query: 930 GPDEGFFKIERG-NNACGIEQIAGYATI 956
             ++G+  + R  NNACGI  +A +  +
Sbjct: 302 WGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 156/329 (47%), Gaps = 29/329 (8%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 329
           SL    E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SLALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 330 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
              +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKK 124

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   + 
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMT 183

Query: 446 QPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILY 503
              +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + 
Sbjct: 184 NAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVA 240

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
           + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG 
Sbjct: 241 RVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGE 300

Query: 564 IGPDEGFFKIERG-NNACGIEQIAGYATI 591
              ++G+  + R  NNACGI  +A +  +
Sbjct: 301 NWGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 122/223 (54%), Gaps = 6/223 (2%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           E +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+
Sbjct: 110 EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVD 169

Query: 66  CAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDF 123
           C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   
Sbjct: 170 CVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYRE 226

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q
Sbjct: 227 IPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ 286

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
               +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 287 KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|146217394|gb|ABQ10739.1| cathepsin L [Penaeus monodon]
          Length = 341

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 166/327 (50%), Gaps = 33/327 (10%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK----------KHERYGTS--EFSDR 335
           +LE ++AF ++  ++Y ++ E   R + F ++ HK           H  Y  S  ++ D 
Sbjct: 25  VLEEWEAFKLEHSKKYDSEVEESFRMKIFTENKHKIANHNKGFAQGHHTYKLSMNKYGDM 84

Query: 336 SPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
              E +    GF+ +     +   +R       +E + D  +P   DWR K    P  DQ
Sbjct: 85  LHHEFVSTMNGFRGNHTGGYK--NNRAYTGATFIEPDDDVQLPKNVDWRTKGAVTPIKDQ 142

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCWAFS  G LEGQ   KTG+LV  S+  LV+C+++  G  GC+G  ++   EY  
Sbjct: 143 GQCGSCWAFSATGALEGQTFRKTGQLVSLSEQNLVDCSRKF-GNNGCNGGLMDNAFEYVK 201

Query: 453 Q-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN-GSE-TMKKILYKYGPLS 509
           +  G+++E+ YPY   + E  KC Y+  +      K F+    GSE  +KK +   GP+S
Sbjct: 202 ENGGIDTEESYPY---DAEDEKCHYN-PRAAGAEDKGFVDVREGSEHALKKAVATVGPVS 257

Query: 510 VGLN-SH-LIHFY-NGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIG 565
           V ++ SH    FY +G  I   +  CSP  L H VL+VGYG  DD   YWL +NSWG   
Sbjct: 258 VAIDASHESFQFYSHGVYI---EPECSPEMLDHGVLVVGYGIDDDGTDYWLVKNSWGTTW 314

Query: 566 PDEGFFKIERG-NNACGIEQIAGYATI 591
            D+G+ K+ R  +N CGI   A +  +
Sbjct: 315 GDQGYVKMARNRDNQCGIASSASFPLV 341



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 164/328 (50%), Gaps = 36/328 (10%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK----------KHERYGTS--EFSDR 701
           +LE ++AF ++  ++Y ++ E   R + F ++ HK           H  Y  S  ++ D 
Sbjct: 25  VLEEWEAFKLEHSKKYDSEVEESFRMKIFTENKHKIANHNKGFAQGHHTYKLSMNKYGDM 84

Query: 702 SPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
              E +    GF+ +     +   +R       +E + D  +P   DWR K    P  DQ
Sbjct: 85  LHHEFVSTMNGFRGNHTGGYK--NNRAYTGATFIEPDDDVQLPKNVDWRTKGAVTPIKDQ 142

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQ 818
             CGSCWAFS  G LEGQ   KTG+LV  S+  LV+C+++   +GC+G   + + EY  +
Sbjct: 143 GQCGSCWAFSATGALEGQTFRKTGQLVSLSEQNLVDCSRKFGNNGCNGGLMDNAFEYVKE 202

Query: 819 -AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSE-TMKKILYKYGPLSV 875
             G+++E+ YPY   + E  KC Y+  +      K F+    GSE  +KK +   GP+SV
Sbjct: 203 NGGIDTEESYPY---DAEDEKCHYN-PRAAGAEDKGFVDVREGSEHALKKAVATVGPVSV 258

Query: 876 LLNSDLIHD-----YNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPI 929
            +  D  H+      +G  I   +  CSP  L H VL+VGYG   D   YWLV+NSWG  
Sbjct: 259 AI--DASHESFQFYSHGVYI---EPECSPEMLDHGVLVVGYGIDDDGTDYWLVKNSWGTT 313

Query: 930 GPDEGFFKIERG-NNACGIEQIAGYATI 956
             D+G+ K+ R  +N CGI   A +  +
Sbjct: 314 WGDQGYVKMARNRDNQCGIASSASFPLV 341



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 127/236 (53%), Gaps = 21/236 (8%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
            +E + D  +P   DWR K    P  DQ  CGSCWAFS  G LEGQ   KTG+LV  S+ 
Sbjct: 115 FIEPDDDVQLPKNVDWRTKGAVTPIKDQGQCGSCWAFSATGALEGQTFRKTGQLVSLSEQ 174

Query: 62  QLVECAKQC--SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
            LV+C+++   +GC+G   + + EY  +  G+++E+ YPY   + E  KC Y+  +    
Sbjct: 175 NLVDCSRKFGNNGCNGGLMDNAFEYVKENGGIDTEESYPY---DAEDEKCHYN-PRAAGA 230

Query: 119 TGKDFLHFN-GSE-TMKKILYKYGPLSVLLNSDLIHD-----YNGTPIRKNDETCSPYDL 171
             K F+    GSE  +KK +   GP+SV +  D  H+      +G  I   +  CSP  L
Sbjct: 231 EDKGFVDVREGSEHALKKAVATVGPVSVAI--DASHESFQFYSHGVYI---EPECSPEML 285

Query: 172 GHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            H VL+VGYG   D   YWLV+NSWG    D+G+ K+ R  +N CGI   A +  +
Sbjct: 286 DHGVLVVGYGIDDDGTDYWLVKNSWGTTWGDQGYVKMARNRDNQCGIASSASFPLV 341



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 2/62 (3%)

Query: 965  CSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYA 1022
            CSP  L H VL+VGYG  DD   YWLV+NSWG    D+G+ K+ R  +N CGI   A + 
Sbjct: 280  CSPEMLDHGVLVVGYGIDDDGTDYWLVKNSWGTTWGDQGYVKMARNRDNQCGIASSASFP 339

Query: 1023 TI 1024
             +
Sbjct: 340  LV 341


>gi|385298943|gb|AFI60244.1| cysteine protease/senescence-enhanced 1, partial [Panicum virgatum]
          Length = 282

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 120/222 (54%), Gaps = 12/222 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA   
Sbjct: 65  LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPVSLSEQQLVDCAGAY 124

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +  GC+G     + EY  H  GL++E+ YPYK  NG    C +  S V +          
Sbjct: 125 NNFGCNGGLPSQAFEYIKHNGGLDTEESYPYKGVNG---LCQFKASNVGVKVLDSVNITL 181

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYN--GTPIRKNDET-CSPYDLGHAVLLVGYGKQ 183
           G+E  +K  +    P+SV    ++I+ +    + +  +D    +P D+ HAVL VGYG +
Sbjct: 182 GAENELKDAVGLVRPVSVAF--EVINGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVE 239

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           + +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 240 NGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 281



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 120/222 (54%), Gaps = 12/222 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA   
Sbjct: 65  LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPVSLSEQQLVDCAGAY 124

Query: 802 S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
           +  GC+G     + EY  H  GL++E+ YPYK  NG    C +  S V +          
Sbjct: 125 NNFGCNGGLPSQAFEYIKHNGGLDTEESYPYKGVNG---LCQFKASNVGVKVLDSVNITL 181

Query: 859 GSET-MKKILYKYGPLSVLLNSDLIHDYN--GTPIRKNDET-CSPYDLGHAVLLVGYGKQ 914
           G+E  +K  +    P+SV    ++I+ +    + +  +D    +P D+ HAVL VGYG +
Sbjct: 182 GAENELKDAVGLVRPVSVAF--EVINGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVE 239

Query: 915 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           + +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 240 NGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 281



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 112/220 (50%), Gaps = 7/220 (3%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA   
Sbjct: 65  LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPVSLSEQQLVDCAGAY 124

Query: 436 SGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN 493
           +  G   GL  Q  EY  H  GL++E+ YPY+  NG    C +  S V +          
Sbjct: 125 NNFGCNGGLPSQAFEYIKHNGGLDTEESYPYKGVNG---LCQFKASNVGVKVLDSVNITL 181

Query: 494 GSET-MKKILYKYGPLSVGLNS-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
           G+E  +K  +    P+SV     +    Y       +    +P D+ HAVL VGYG ++ 
Sbjct: 182 GAENELKDAVGLVRPVSVAFEVINGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVENG 241

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           +PYWL +NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 242 VPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 281



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +P D+ HAVL VGYG ++ +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 223  TPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 281


>gi|300120790|emb|CBK21032.2| unnamed protein product [Blastocystis hominis]
          Length = 516

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 157/337 (46%), Gaps = 38/337 (11%)

Query: 279 GSLTFDNENILET---------FKAFIVKRGRQYANDEEIKERFEYF--------KQDGH 321
           GS+  D+   L T         FK F VK  ++  ND E KER   F        K +  
Sbjct: 195 GSVVGDSHKFLSTRFPRTAAAEFKQF-VKDNKKCYNDVEYKERQLNFLRNKARVEKVNSE 253

Query: 322 KKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 381
            +  +   +  +DRS  E+    G K S++  +   A R            +G  PD  D
Sbjct: 254 NRSYKLKLNHLADRSESELRAMMGLKRSQK--KDFAAHRY--------TPSNGVKPDFVD 303

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGC 441
           WR+K    P  DQ  CGSCW +   G+LEGQY +K GKLV+FS+  L++C+    G  GC
Sbjct: 304 WREKGAVTPVKDQCMCGSCWTYGTVGVLEGQYFLKYGKLVKFSEQNLLDCSWNF-GNDGC 362

Query: 442 DGLEQPIEY---THQAGLESEKDYPYRNG-NGEKFKCAYDKSKVKLFTGKDFLYFNGS-E 496
           +G E    Y    H  GL +++DY +  G +G    C ++KS   +      L   GS E
Sbjct: 363 NGGEDFRAYGWMLHNGGLMTDEDYGHYLGIDGW---CHFNKSAAAVKITDYVLITPGSVE 419

Query: 497 TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY-DLGHAVLLVGYGKQDDIPYW 555
            ++  +   GP+SVG+       +    +  N E  S   D  HAVL VGYG ++   YW
Sbjct: 420 ELEDAVANVGPISVGIAVTTDFLFYAEGVFDNPECSSAVEDQAHAVLAVGYGTENGKDYW 479

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           L +NSW     D G+ KI R NN CG+   A Y  ++
Sbjct: 480 LIKNSWSTYWGDNGYVKIARKNNICGVATAASYPILE 516



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 154/337 (45%), Gaps = 39/337 (11%)

Query: 645 GSLTFDNENILET---------FKAFIVKRGRQYANDEEIKERFEYF--------KQDGH 687
           GS+  D+   L T         FK F VK  ++  ND E KER   F        K +  
Sbjct: 195 GSVVGDSHKFLSTRFPRTAAAEFKQF-VKDNKKCYNDVEYKERQLNFLRNKARVEKVNSE 253

Query: 688 KKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 747
            +  +   +  +DRS  E+    G K S++  +   A R            +G  PD  D
Sbjct: 254 NRSYKLKLNHLADRSESELRAMMGLKRSQK--KDFAAHRY--------TPSNGVKPDFVD 303

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGC 807
           WR+K    P  DQ  CGSCW +   G+LEGQY +K GKLV+FS+  L++C+    G DGC
Sbjct: 304 WREKGAVTPVKDQCMCGSCWTYGTVGVLEGQYFLKYGKLVKFSEQNLLDCSWNF-GNDGC 362

Query: 808 F----FEPSIEYTHQAGLESEKDY-PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS-E 861
                F       H  GL +++DY  Y   +G    C ++KS   +      L   GS E
Sbjct: 363 NGGEDFRAYGWMLHNGGLMTDEDYGHYLGIDGW---CHFNKSAAAVKITDYVLITPGSVE 419

Query: 862 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY-DLGHAVLLVGYGKQDNIPYW 920
            ++  +   GP+SV +       +    +  N E  S   D  HAVL VGYG ++   YW
Sbjct: 420 ELEDAVANVGPISVGIAVTTDFLFYAEGVFDNPECSSAVEDQAHAVLAVGYGTENGKDYW 479

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           L++NSW     D G+ KI R NN CG+   A Y  ++
Sbjct: 480 LIKNSWSTYWGDNGYVKIARKNNICGVATAASYPILE 516



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 114/226 (50%), Gaps = 11/226 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD  DWR+K    P  DQ  CGSCW +   G+LEGQY +K GKLV+FS+  L++C+
Sbjct: 295 NGVKPDFVDWREKGAVTPVKDQCMCGSCWTYGTVGVLEGQYFLKYGKLVKFSEQNLLDCS 354

Query: 68  KQCSGCDGCF----FEPSIEYTHQAGLESEKDY-PYKNANGEKFKCAYDKSKVKLFTGKD 122
               G DGC     F       H  GL +++DY  Y   +G    C ++KS   +     
Sbjct: 355 WNF-GNDGCNGGEDFRAYGWMLHNGGLMTDEDYGHYLGIDGW---CHFNKSAAAVKITDY 410

Query: 123 FLHFNGS-ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY-DLGHAVLLVGY 180
            L   GS E ++  +   GP+SV +       +    +  N E  S   D  HAVL VGY
Sbjct: 411 VLITPGSVEELEDAVANVGPISVGIAVTTDFLFYAEGVFDNPECSSAVEDQAHAVLAVGY 470

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           G ++   YWL++NSW     D G+ KI R NN CG+   A Y  ++
Sbjct: 471 GTENGKDYWLIKNSWSTYWGDNGYVKIARKNNICGVATAASYPILE 516



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 34/57 (59%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            D  HAVL VGYG ++   YWL++NSW     D G+ KI R NN CG+   A Y  ++
Sbjct: 460  DQAHAVLAVGYGTENGKDYWLIKNSWSTYWGDNGYVKIARKNNICGVATAASYPILE 516


>gi|115472081|ref|NP_001059639.1| Os07g0480900 [Oryza sativa Japonica Group]
 gi|27261016|dbj|BAC45132.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113611175|dbj|BAF21553.1| Os07g0480900 [Oryza sativa Japonica Group]
 gi|215693312|dbj|BAG88694.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 376

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 154/343 (44%), Gaps = 63/343 (18%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 709
           F AF+ + GR+Y+  EE   R   F                 R+G + FSD + EE   +
Sbjct: 48  FAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQALDPTARHGVTPFSDLTREEFEAR 107

Query: 710 -TGFKWSERTYERIVADREKVEKM-----LMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
            TG           V D  +   M       E E  G +P ++DWR +        Q AC
Sbjct: 108 LTGLAAD-------VGDDVRRRPMPSAAPATEEEVSG-LPASFDWRDRGAVTDVKMQGAC 159

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIE 814
           GSCWAFS  G +EG   + TG L++ S+ QLV+C   C         SGC G     +  
Sbjct: 160 GSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCDAEKKTECDSGCGGGLMTNAYA 219

Query: 815 Y-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL----FT------GKDFLHFNGSETM 863
           Y     GL  +  YPY  A G    C +D ++V +    FT      G D    +G   M
Sbjct: 220 YLMSSGGLMEQSAYPYTGAQG---TCRFDANRVAVRVANFTVVAPPGGND---GDGDAQM 273

Query: 864 KKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ------ 914
           +  L ++GPL+V LN+  +  Y G    P+      C    + H VLLVGYG++      
Sbjct: 274 RAALVRHGPLAVGLNAAYMQTYVGGVSCPL-----VCPRAWVNHGVLLVGYGERGFAALR 328

Query: 915 -DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
             + PYW+++NSWG    ++G++++ RG N CG++ +     +
Sbjct: 329 LGHRPYWIIKNSWGKAWGEQGYYRLCRGRNVCGVDTMVSAVAV 371



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 152/343 (44%), Gaps = 62/343 (18%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 343
           F AF+ + GR+Y+  EE   R   F                 R+G + FSD + EE   +
Sbjct: 48  FAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQALDPTARHGVTPFSDLTREEFEAR 107

Query: 344 -TGFKWSERTYERIVADREKVEKM-----LMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
            TG           V D  +   M       E E  G +P ++DWR +        Q AC
Sbjct: 108 LTGLAAD-------VGDDVRRRPMPSAAPATEEEVSG-LPASFDWRDRGAVTDVKMQGAC 159

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCGGCDGLEQPI 448
           GSCWAFS  G +EG   + TG L++ S+ QLV+C   C         SGCGG        
Sbjct: 160 GSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCDAEKKTECDSGCGGGLMTNAYA 219

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKL----FT------GKDFLYFNGSETM 498
                 GL  +  YPY    G +  C +D ++V +    FT      G D    +G   M
Sbjct: 220 YLMSSGGLMEQSAYPY---TGAQGTCRFDANRVAVRVANFTVVAPPGGND---GDGDAQM 273

Query: 499 KKILYKYGPLSVGLNSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ------ 549
           +  L ++GPL+VGLN+  +  Y G    P+      C    + H VLLVGYG++      
Sbjct: 274 RAALVRHGPLAVGLNAAYMQTYVGGVSCPL-----VCPRAWVNHGVLLVGYGERGFAALR 328

Query: 550 -DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
               PYW+ +NSWG    ++G++++ RG N CG++ +     +
Sbjct: 329 LGHRPYWIIKNSWGKAWGEQGYYRLCRGRNVCGVDTMVSAVAV 371



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 119/245 (48%), Gaps = 41/245 (16%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P ++DWR +        Q  CGSCWAFS  G +EG   + TG L++ S+ QLV+C   C
Sbjct: 138 LPASFDWRDRGAVTDVKMQGACGSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTC 197

Query: 71  ---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL--- 117
                    SGC G     +  Y     GL  +  YPY  A G    C +D ++V +   
Sbjct: 198 DAEKKTECDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQG---TCRFDANRVAVRVA 254

Query: 118 -FT------GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCS 167
            FT      G D    +G   M+  L ++GPL+V LN+  +  Y G    P+      C 
Sbjct: 255 NFTVVAPPGGND---GDGDAQMRAALVRHGPLAVGLNAAYMQTYVGGVSCPL-----VCP 306

Query: 168 PYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
              + H VLLVGYG++        + PYW+++NSWG    ++G++++ RG N CG++ + 
Sbjct: 307 RAWVNHGVLLVGYGERGFAALRLGHRPYWIIKNSWGKAWGEQGYYRLCRGRNVCGVDTMV 366

Query: 221 GYATI 225
               +
Sbjct: 367 SAVAV 371



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLV 990
            +  G  A G+        +  V     C    + H VLLVGYG++          PYW++
Sbjct: 278  VRHGPLAVGLNAAYMQTYVGGVSCPLVCPRAWVNHGVLLVGYGERGFAALRLGHRPYWII 337

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +NSWG    ++G++++ RG N CG++ +     +
Sbjct: 338  KNSWGKAWGEQGYYRLCRGRNVCGVDTMVSAVAV 371


>gi|125547724|gb|EAY93546.1| hypothetical protein OsI_15336 [Oryza sativa Indica Group]
          Length = 348

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 151/297 (50%), Gaps = 42/297 (14%)

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           +G ++FSD +P E   +        + E +V        +L     DG +PD +DWR+  
Sbjct: 68  HGVTKFSDLTPGEFRDRL-LGLRRPSLEGLVGGEPHEAPIL---PTDG-LPDDFDWREHG 122

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SG 803
             GP  DQ +CGSCW+FS +G LEG + + TGKL   S+ Q+V+C  +C         SG
Sbjct: 123 AVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDASESRACDSG 182

Query: 804 CDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE- 861
           C+G     +  Y  ++ GL+SEKDYPY    G +  C +DKSK+ +   K+F   + +E 
Sbjct: 183 CNGGLMTTAFSYLMKSGGLQSEKDYPYA---GRENTCKFDKSKI-VAQVKNFSVISVNED 238

Query: 862 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ--- 914
            +   L K+GPL++ +N+  +  Y G           P+     L H VLLVGYG     
Sbjct: 239 QIAANLVKHGPLAIAINAAYMQTYIGG-------VSCPFICGRHLDHGVLLVGYGSAGYA 291

Query: 915 ----DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT-IDVVKNDE 963
                  PYW+++NSWG    ++G++KI RG    N CG++ +    T I   K +E
Sbjct: 292 PIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTAIHTSKKEE 348



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 127/239 (53%), Gaps = 36/239 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR+    GP  DQ  CGSCW+FS +G LEG + + TGKL   S+ Q+V+C  +C
Sbjct: 112 LPDDFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHEC 171

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     +  Y  ++ GL+SEKDYPY    G +  C +DKSK+ +   
Sbjct: 172 DASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYA---GRENTCKFDKSKI-VAQV 227

Query: 121 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 175
           K+F   + +E  +   L K+GPL++ +N+  +  Y G           P+     L H V
Sbjct: 228 KNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIGG-------VSCPFICGRHLDHGV 280

Query: 176 LLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 224
           LLVGYG            PYW+++NSWG    ++G++KI RG    N CG++ +    T
Sbjct: 281 LLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVT 339



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 145/288 (50%), Gaps = 40/288 (13%)

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           +G ++FSD +P E   +        + E +V        +L     DG +PD +DWR+  
Sbjct: 68  HGVTKFSDLTPGEFRDRL-LGLRRPSLEGLVGGEPHEAPIL---PTDG-LPDDFDWREHG 122

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC------GG 440
             GP  DQ +CGSCW+FS +G LEG + + TGKL   S+ Q+V+C  +C          G
Sbjct: 123 AVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDASESRACDSG 182

Query: 441 CDGLEQPIEYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE- 496
           C+G      +++     GL+SEKDYPY    G +  C +DKSK+ +   K+F   + +E 
Sbjct: 183 CNGGLMTTAFSYLMKSGGLQSEKDYPY---AGRENTCKFDKSKI-VAQVKNFSVISVNED 238

Query: 497 TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ--- 549
            +   L K+GPL++ +N+  +  Y G           P+     L H VLLVGYG     
Sbjct: 239 QIAANLVKHGPLAIAINAAYMQTYIGG-------VSCPFICGRHLDHGVLLVGYGSAGYA 291

Query: 550 ----DDIPYWLARNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 590
                + PYW+ +NSWG    ++G++KI RG    N CG++ +    T
Sbjct: 292 PIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVT 339



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 10/64 (15%)

Query: 970  LGHAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIA 1019
            L H VLLVGYG          + PYW+++NSWG    ++G++KI RG    N CG++ + 
Sbjct: 276  LDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMV 335

Query: 1020 GYAT 1023
               T
Sbjct: 336  SSVT 339


>gi|77735825|ref|NP_001029607.1| cathepsin K precursor [Bos taurus]
 gi|59858469|gb|AAX09069.1| cathepsin K preproprotein [Bos taurus]
 gi|83638771|gb|AAI09854.1| Cathepsin K [Bos taurus]
 gi|296489554|tpg|DAA31667.1| TPA: cathepsin K [Bos taurus]
          Length = 334

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 135/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 81  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYV 132

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 133 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 192

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 193 YVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 249

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L            DE C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 250 ISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 309

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 310 KGYILMARNKNNACGIANLASFPKM 334



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 135/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 81  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYV 132

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 133 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 191

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 192 QYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 248

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F         DE C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 249 PISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 308

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 309 NKGYILMARNKNNACGIANLASFPKM 334



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 117 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 176

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 177 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIP 233

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L            DE C+  +L HAVL VGYG Q  
Sbjct: 234 EGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKG 293

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 294 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 334



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 271  DENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 330

Query: 1021 YATI 1024
            +  +
Sbjct: 331  FPKM 334


>gi|343473977|emb|CCD14279.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 150/319 (47%), Gaps = 26/319 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGKC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAG 820
            S WAF++ G +EGQ+ I   +L   S+  LV C     GC   F + + ++    +   
Sbjct: 148 DSSWAFTVIGNIEGQWKIAGHELTSLSEQMLVSCDTNDLGCRAGFMDTAFKWIVSPNDGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLN 878
           + +E+ YPY +  G    C  +KS KV     +D +H  +    + + L K GP+++ ++
Sbjct: 208 VFTEQSYPYASGGGNVPAC--NKSGKVVGANIRDHVHILDNENAIAEWLAKNGPVAIAVD 265

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +     Y G  +     +C   ++  A LLVGY      PYW+++NSWG    +EG+ +I
Sbjct: 266 ATSFQRYTGGVL----TSCISKEVNSAALLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRI 321

Query: 939 ERGNNACGIEQIAGYATID 957
           E+G N C ++     A + 
Sbjct: 322 EKGTNQCRMKDYVSSAVVS 340



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 141/317 (44%), Gaps = 21/317 (6%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGKC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC--GGCDGLEQPIEYTHQAG 455
            S WAF++ G +EGQ+ I   +L   S+  LV C     GC  G  D   + I   +   
Sbjct: 148 DSSWAFTVIGNIEGQWKIAGHELTSLSEQMLVSCDTNDLGCRAGFMDTAFKWIVSPNDGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           + +E+ YPY +G G    C      V           +    + + L K GP+++ +++ 
Sbjct: 208 VFTEQSYPYASGGGNVPACNKSGKVVGANIRDHVHILDNENAIAEWLAKNGPVAIAVDAT 267

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
               Y G  +     +C   ++  A LLVGY      PYW+ +NSWG    +EG+ +IE+
Sbjct: 268 SFQRYTGGVL----TSCISKEVNSAALLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRIEK 323

Query: 576 GNNACGIEQIAGYATID 592
           G N C ++     A + 
Sbjct: 324 GTNQCRMKDYVSSAVVS 340



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 11/223 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P+A DWRKK    P  DQ  C S WAF++ G +EGQ+ I   +L   S+  LV C  
Sbjct: 124 GKAPEAVDWRKKGAVTPVKDQGKCDSSWAFTVIGNIEGQWKIAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFL 124
              GC   F + + ++    +   + +E+ YPY +  G    C  +KS KV     +D +
Sbjct: 184 NDLGCRAGFMDTAFKWIVSPNDGNVFTEQSYPYASGGGNVPAC--NKSGKVVGANIRDHV 241

Query: 125 H-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           H  +    + + L K GP+++ +++     Y G  +     +C   ++  A LLVGY   
Sbjct: 242 HILDNENAIAEWLAKNGPVAIAVDATSFQRYTGGVL----TSCISKEVNSAALLVGYDDT 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
              PYW+++NSWG    +EG+ +IE+G N C ++     A + 
Sbjct: 298 SKPPYWIIKNSWGKGWGEEGYIRIEKGTNQCRMKDYVSSAVVS 340



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C   ++  A LLVGY      PYW+++NSWG    +EG+ +IE+G N C ++     A 
Sbjct: 279  SCISKEVNSAALLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRIEKGTNQCRMKDYVSSAV 338

Query: 1024 ID 1025
            + 
Sbjct: 339  VS 340


>gi|261328618|emb|CBH11596.1| cysteine peptidase precursor, (fragment) [Trypanosoma brucei
           gambiense DAL972]
          Length = 404

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 140/302 (46%), Gaps = 22/302 (7%)

Query: 666 GRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 717
           G+ Y + +E   RF  F+        Q     +  +G + FSD + EE      F+   R
Sbjct: 3   GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREE------FRARYR 56

Query: 718 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEG 777
                 A  +K  +  + V   G  P A DWR+K    P  DQ  CGSCWAF   G +EG
Sbjct: 57  NGASYFAAAQKRLRKTVNVTT-GRAPAAVDWREKGAVTPMKDQGQCGSCWAFYSIGNIEG 115

Query: 778 QYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANG 834
           Q+ +    LV  S+  LV C     GC G   + +  +   ++   + +E  YPY + NG
Sbjct: 116 QWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNG 175

Query: 835 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 894
           E+ +C  +  ++              + +   L + GPL++ +++    DYNG  +    
Sbjct: 176 EQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGILT--- 232

Query: 895 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 954
            +C+   L H VLLVGY    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A
Sbjct: 233 -SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSA 291

Query: 955 TI 956
            +
Sbjct: 292 VV 293



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 139/302 (46%), Gaps = 21/302 (6%)

Query: 300 GRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 351
           G+ Y + +E   RF  F+        Q     +  +G + FSD + EE      F+   R
Sbjct: 3   GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREE------FRARYR 56

Query: 352 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEG 411
                 A  +K  +  + V   G  P A DWR+K    P  DQ  CGSCWAF   G +EG
Sbjct: 57  NGASYFAAAQKRLRKTVNVTT-GRAPAAVDWREKGAVTPMKDQGQCGSCWAFYSIGNIEG 115

Query: 412 QYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEKDYPYRNGNG 469
           Q+ +    LV  S+  LV C     GCGG   D     I  ++   + +E  YPY +GNG
Sbjct: 116 QWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNG 175

Query: 470 EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKND 529
           E+ +C  +  ++              + +   L + GPL++ +++     YNG  +    
Sbjct: 176 EQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGILT--- 232

Query: 530 ETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 589
            +C+   L H VLLVGY    + PYW+ +NSW  +  ++G+ +IE+G N C + Q    A
Sbjct: 233 -SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSA 291

Query: 590 TI 591
            +
Sbjct: 292 VV 293



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR+K    P  DQ  CGSCWAF   G +EGQ+ +    LV  S+  LV C  
Sbjct: 78  GRAPAAVDWREKGAVTPMKDQGQCGSCWAFYSIGNIEGQWQVAGNPLVSLSEQMLVSCDT 137

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++          
Sbjct: 138 IDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDL 197

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N
Sbjct: 198 PQDEDAIAAYLAENGPLAIAVDATSFMDYNGGILT----SCTSEQLDHGVLLVGYNDNSN 253

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 254 PPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 293



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 233  SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 292

Query: 1024 I 1024
            +
Sbjct: 293  V 293


>gi|449471885|ref|XP_004186123.1| PREDICTED: LOW QUALITY PROTEIN: pro-cathepsin H [Taeniopygia
           guttata]
          Length = 334

 Score =  145 bits (366), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 89/223 (39%), Positives = 121/223 (54%), Gaps = 13/223 (5%)

Query: 742 VPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
           VPD+ DWRKK N   P   Q ACGSCW FS  G LE   AI TGKL+  ++ QLV+CA+ 
Sbjct: 109 VPDSIDWRKKGNFVTPVKIQGACGSCWTFSTTGCLESAIAIATGKLLSLAEQQLVDCAQA 168

Query: 801 CS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYD--KSKVKLFTGKDF 854
            +  GC G     + EY  +  GL  E  YPY+  NG  +F+   D    K   F  KD 
Sbjct: 169 FNNHGCSGGLPSQAFEYILYNRGLMGEDSYPYRAKNGTCRFQPDNDIRVGKAIAFV-KDV 227

Query: 855 LHFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 910
           ++      + M + + ++ P+S    + SD +H   G       E  +P  + HAVL VG
Sbjct: 228 INITQYDEDGMVEAVGRHNPVSFAFEVTSDFMHYRKGVYSNPRCEH-TPDKVNHAVLAVG 286

Query: 911 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
           YG++D  PYW+V+NSWG +   +G+F IERG N CG+   A Y
Sbjct: 287 YGQEDGTPYWIVKNSWGRLWGMQGYFLIERGKNMCGLAACASY 329



 Score =  143 bits (360), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 89/223 (39%), Positives = 119/223 (53%), Gaps = 12/223 (5%)

Query: 376 VPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
           VPD+ DWRKK N   P   Q ACGSCW FS  G LE   AI TGKL+  ++ QLV+CA+ 
Sbjct: 109 VPDSIDWRKKGNFVTPVKIQGACGSCWTFSTTGCLESAIAIATGKLLSLAEQQLVDCAQA 168

Query: 435 CSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGE-KFKCAYD--KSKVKLFTGKDF 489
            +  G   GL  Q  EY  +  GL  E  YPYR  NG  +F+   D    K   F  KD 
Sbjct: 169 FNNHGCSGGLPSQAFEYILYNRGLMGEDSYPYRAKNGTCRFQPDNDIRVGKAIAFV-KDV 227

Query: 490 LYFN--GSETMKKILYKYGPLSVG--LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVG 545
           +       + M + + ++ P+S    + S  +H+  G       E  +P  + HAVL VG
Sbjct: 228 INITQYDEDGMVEAVGRHNPVSFAFEVTSDFMHYRKGVYSNPRCEH-TPDKVNHAVLAVG 286

Query: 546 YGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
           YG++D  PYW+ +NSWG +   +G+F IERG N CG+   A Y
Sbjct: 287 YGQEDGTPYWIVKNSWGRLWGMQGYFLIERGKNMCGLAACASY 329



 Score =  143 bits (360), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           VPD+ DWRKK N   P   Q  CGSCW FS  G LE   AI TGKL+  ++ QLV+CA+ 
Sbjct: 109 VPDSIDWRKKGNFVTPVKIQGACGSCWTFSTTGCLESAIAIATGKLLSLAEQQLVDCAQA 168

Query: 70  CS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYD--KSKVKLFTGKDF 123
            +  GC G     + EY  +  GL  E  YPY+  NG  +F+   D    K   F  KD 
Sbjct: 169 FNNHGCSGGLPSQAFEYILYNRGLMGEDSYPYRAKNGTCRFQPDNDIRVGKAIAFV-KDV 227

Query: 124 LHFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
           ++      + M + + ++ P+S    + SD +H   G       E  +P  + HAVL VG
Sbjct: 228 INITQYDEDGMVEAVGRHNPVSFAFEVTSDFMHYRKGVYSNPRCEH-TPDKVNHAVLAVG 286

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           YG++D  PYW+V+NSWG +   +G+F IERG N CG+   A Y
Sbjct: 287 YGQEDGTPYWIVKNSWGRLWGMQGYFLIERGKNMCGLAACASY 329



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/56 (51%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG++D  PYW+V+NSWG +   +G+F IERG N CG+   A Y
Sbjct: 274  TPDKVNHAVLAVGYGQEDGTPYWIVKNSWGRLWGMQGYFLIERGKNMCGLAACASY 329


>gi|440906717|gb|ELR56946.1| Cathepsin K [Bos grunniens mutus]
          Length = 338

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 135/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 85  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRAPDSIDYRKKGYV 136

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 137 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 196

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 197 YVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 253

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L            DE C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 254 ISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 313

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 314 KGYILMARNKNNACGIANLASFPKM 338



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 135/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 85  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRAPDSIDYRKKGYV 136

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 137 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 195

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 196 QYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 252

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F         DE C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 253 PISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 312

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 313 NKGYILMARNKNNACGIANLASFPKM 338



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 121 EGRAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 180

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 181 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIP 237

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L            DE C+  +L HAVL VGYG Q  
Sbjct: 238 EGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKG 297

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 298 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 338



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 275  DENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 334

Query: 1021 YATI 1024
            +  +
Sbjct: 335  FPKM 338


>gi|402770505|gb|AFQ98387.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 10/224 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 68  KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V   T   ++
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGA-TDTGYV 228

Query: 125 HFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
               GSE  +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           +    YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 10/224 (4%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 799 KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V   T   ++
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGA-TDTGYV 228

Query: 856 HFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 913
               GSE  +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
           +    YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 118/224 (52%), Gaps = 9/224 (4%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 433 KQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF 489
            Q  G  GC+G  +E   +Y     G+++EK YPY   +GE   C + K  V        
Sbjct: 173 -QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYV 228

Query: 490 LYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
               GSE  +KK +   GP+SV +++    F   +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           +    YWL +NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 1017
            V ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266  VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 326  QASYPLV 332


>gi|426216528|ref|XP_004002514.1| PREDICTED: cathepsin K [Ovis aries]
          Length = 330

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 135/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRTPDSVDYRKKGYV 128

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 129 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 188

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 189 YVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 245

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L            DE C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 246 ISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 305

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 306 KGYILMARNKNNACGIANLASFPKM 330



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 135/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRTPDSVDYRKKGYV 128

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 129 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 187

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 188 QYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 244

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F         DE C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 245 PISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 304

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 305 NKGYILMARNKNNACGIANLASFPKM 330



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 113 EGRTPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 172

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 173 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIP 229

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L            DE C+  +L HAVL VGYG Q  
Sbjct: 230 EGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 290 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 330



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 267  DENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 326

Query: 1021 YATI 1024
            +  +
Sbjct: 327  FPKM 330


>gi|394331818|gb|AFN27128.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 139/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+   +L   S+  LV C  + SGC G     + E+        + +
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEHHLVSCHDKNSGCTGGLMLQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY +++G   +C+     V       ++    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY +   +PYW+++NSWG    + G+ ++  G 
Sbjct: 271 MSYQSGVL----TSCAGISLNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 139/304 (45%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+   +L   S+  LV C  + SGC G   L Q  E+        + 
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEHHLVSCHDKNSGCTGGLML-QAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY + +G   +C+     V       ++    SET M   L K GP+S+ +++  
Sbjct: 210 TEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY +  ++PYW+ +NSWG    + G+ ++  G
Sbjct: 270 FMSYQSGVL----TSCAGISLNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWRKK    P  DQ  CGSCWAFS  G +E Q+A+   +L   S+  LV C  + 
Sbjct: 126 VPDAVDWRKKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSEHHLVSCHDKN 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC G     + E+        + +E  YPY +++G   +C+     V       ++   
Sbjct: 186 SGCTGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +
Sbjct: 246 SSETVMAAWLAKNGPISIAVDASSFMSYQSGVL----TSCAGISLNHGVLLVGYNRTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    + G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGENWGENGYVRVTMGVNAC 329



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY +  ++PYW+++NSWG    + G+ ++  G NAC
Sbjct: 280  SCAGISLNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMGVNAC 329


>gi|222628593|gb|EEE60725.1| hypothetical protein OsJ_14236 [Oryza sativa Japonica Group]
          Length = 364

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 152/297 (51%), Gaps = 42/297 (14%)

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           +G ++FSD +P E   +  F    R     +   E  E  ++    DG +PD +DWR+  
Sbjct: 84  HGVTKFSDLTPGEF--RDRFLGLRRPSLEGLVGGEPHEAPILPT--DG-LPDDFDWREHG 138

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SG 803
             GP  DQ +CGSCW+FS +G LEG + + TGKL   S+ Q+V+C  +C         SG
Sbjct: 139 AVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDASESRACDSG 198

Query: 804 CDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE- 861
           C+G     +  Y  ++ GL+SEKDYPY    G +  C +DKSK+ +   K+F   + +E 
Sbjct: 199 CNGGLMTTAFSYLMKSGGLQSEKDYPYA---GRENTCKFDKSKI-VAQVKNFSVISVNED 254

Query: 862 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ--- 914
            +   L K+GPL++ +N+  +  Y G           P+     L H VLLVGYG     
Sbjct: 255 QIAANLVKHGPLAIAINAAYMQTYIGG-------VSCPFICGRHLDHGVLLVGYGSAGYA 307

Query: 915 ----DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT-IDVVKNDE 963
                  PYW+++NSWG    ++G++KI RG    N CG++ +    T I   K +E
Sbjct: 308 PIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTAIHTSKKEE 364



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 127/239 (53%), Gaps = 36/239 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR+    GP  DQ  CGSCW+FS +G LEG + + TGKL   S+ Q+V+C  +C
Sbjct: 128 LPDDFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHEC 187

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     +  Y  ++ GL+SEKDYPY    G +  C +DKSK+ +   
Sbjct: 188 DASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYA---GRENTCKFDKSKI-VAQV 243

Query: 121 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 175
           K+F   + +E  +   L K+GPL++ +N+  +  Y G           P+     L H V
Sbjct: 244 KNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIGG-------VSCPFICGRHLDHGV 296

Query: 176 LLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 224
           LLVGYG            PYW+++NSWG    ++G++KI RG    N CG++ +    T
Sbjct: 297 LLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVT 355



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 146/288 (50%), Gaps = 40/288 (13%)

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           +G ++FSD +P E   +  F    R     +   E  E  ++    DG +PD +DWR+  
Sbjct: 84  HGVTKFSDLTPGEF--RDRFLGLRRPSLEGLVGGEPHEAPILPT--DG-LPDDFDWREHG 138

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC------GG 440
             GP  DQ +CGSCW+FS +G LEG + + TGKL   S+ Q+V+C  +C          G
Sbjct: 139 AVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDASESRACDSG 198

Query: 441 CDGLEQPIEYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE- 496
           C+G      +++     GL+SEKDYPY    G +  C +DKSK+ +   K+F   + +E 
Sbjct: 199 CNGGLMTTAFSYLMKSGGLQSEKDYPY---AGRENTCKFDKSKI-VAQVKNFSVISVNED 254

Query: 497 TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ--- 549
            +   L K+GPL++ +N+  +  Y G           P+     L H VLLVGYG     
Sbjct: 255 QIAANLVKHGPLAIAINAAYMQTYIGG-------VSCPFICGRHLDHGVLLVGYGSAGYA 307

Query: 550 ----DDIPYWLARNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 590
                + PYW+ +NSWG    ++G++KI RG    N CG++ +    T
Sbjct: 308 PIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVT 355



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 10/64 (15%)

Query: 970  LGHAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIA 1019
            L H VLLVGYG          + PYW+++NSWG    ++G++KI RG    N CG++ + 
Sbjct: 292  LDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMV 351

Query: 1020 GYAT 1023
               T
Sbjct: 352  SSVT 355


>gi|402770517|gb|AFQ98393.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 121/224 (54%), Gaps = 10/224 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 68  KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +    +GC+G   E + +Y     G+++EK YPYK  +GE   C + K  V   T   ++
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYKAVDGE---CRFKKEDVGA-TDTGYV 228

Query: 125 HFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
               GSE  +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           +    YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 121/224 (54%), Gaps = 10/224 (4%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 799 KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
           +    +GC+G   E + +Y     G+++EK YPYK  +GE   C + K  V   T   ++
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYKAVDGE---CRFKKEDVGA-TDTGYV 228

Query: 856 HFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 913
               GSE  +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
           +    YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 118/224 (52%), Gaps = 9/224 (4%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 433 KQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF 489
            Q  G  GC+G  +E   +Y     G+++EK YPY+  +GE   C + K  V        
Sbjct: 173 -QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYKAVDGE---CRFKKEDVGATDTGYV 228

Query: 490 LYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
               GSE  +KK +   GP+SV +++    F   +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           +    YWL +NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 1017
            V ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266  VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 326  QASYPLV 332


>gi|379991182|emb|CCA61803.1| cathepsin protein CatL1-MM3p, partial [Fasciola hepatica]
          Length = 326

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 115/216 (53%), Gaps = 12/216 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG   +H  
Sbjct: 168 GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGYYTVHSG 224

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++   GP +V ++  SD +  Y+G   +   +TCSP  L HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGAEGPAAVAVDVESDFMM-YSGGIYQS--QTCSPLGLNHAVLAVGYGTQGG 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASLA 317



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 114/216 (52%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG   +H  
Sbjct: 168 GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGYYTVHSG 224

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++   GP +V ++  SD +  Y+G   +   +TCSP  L HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGAEGPAAVAVDVESDFMM-YSGGIYQS--QTCSPLGLNHAVLAVGYGTQGG 281

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASLA 317



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 113/218 (51%), Gaps = 15/218 (6%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC G  +E   +Y  Q GLE+E  YPY    G+   C Y+K   V   TG  +   
Sbjct: 168 -GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGY-YTVH 222

Query: 493 NGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           +GSE  +K ++   GP +V ++  S  + +  G       +TCSP  L HAVL VGYG Q
Sbjct: 223 SGSEVELKNLVGAEGPAAVAVDVESDFMMYSGGI---YQSQTCSPLGLNHAVLAVGYGTQ 279

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
               YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 280 GGTDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASLA 317



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 17/102 (16%)

Query: 934  GFFKIERGN-----NACGIEQIAGYATIDV----------VKNDETCSPYDLGHAVLLVG 978
            G++ +  G+     N  G E  A  A +DV          +   +TCSP  L HAVL VG
Sbjct: 217  GYYTVHSGSEVELKNLVGAEGPAAVA-VDVESDFMMYSGGIYQSQTCSPLGLNHAVLAVG 275

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 1019
            YG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 276  YGTQGGTDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASLA 317


>gi|109940312|sp|Q5E968.2|CATK_BOVIN RecName: Full=Cathepsin K; Flags: Precursor
          Length = 329

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 135/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L            DE C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 245 ISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYILMARNKNNACGIANLASFPKM 329



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 135/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F         DE C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 244 PISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYILMARNKNNACGIANLASFPKM 329



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L            DE C+  +L HAVL VGYG Q  
Sbjct: 229 EGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|126681066|gb|ABO26562.1| cathepsin L-like cysteine protease [Ixodes ricinus]
          Length = 335

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 160/330 (48%), Gaps = 49/330 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KH-ERYG---------TSEFSDRSPEE 705
           + AF  K G+ Y ++ E   R + + ++ HK  KH E+Y           +EF D    E
Sbjct: 27  WSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNEFGDMLHHE 86

Query: 706 IL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
            +  + GFK   R Y+     RE    +  E  +D  +P   DWR K    P  +Q  CG
Sbjct: 87  FVSTRNGFK---RNYKD--QPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQGQCG 141

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTH-QAGL 821
           SCWAFS  G LEGQ+  K+G +V  S+  LV C+     +GC+G   + + +Y     G+
Sbjct: 142 SCWAFSATGSLEGQHFRKSGSMVSLSEQNLVGCSTDFGNNGCEGGLMDDAFKYIRANKGI 201

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSET-MKKILYKYGPLSVLLN- 878
           ++EK YPY   NG    C + KS V   T   F+    GSET +KK +   GP+SV ++ 
Sbjct: 202 DTEKSYPY---NGTDGTCHFKKSTVGA-TDSGFVDIKEGSETQLKKAVATVGPISVAIDA 257

Query: 879 --------SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
                   SD ++D         +  C    L H VL+VGYG  +   YW V+NSWG   
Sbjct: 258 SHESFQFYSDGVYD---------EPECDSESLDHGVLVVGYGTLNGTDYWFVKNSWGTTW 308

Query: 931 PDEGFFKIERG-NNACGIEQIAGYATIDVV 959
            DEG+ ++ R   N CG   IA  A+I +V
Sbjct: 309 GDEGYIRMSRNKKNQCG---IASSASIPLV 335



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 155/321 (48%), Gaps = 30/321 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KH-ERYG---------TSEFSDRSPEE 339
           + AF  K G+ Y ++ E   R + + ++ HK  KH E+Y           +EF D    E
Sbjct: 27  WSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNEFGDMLHHE 86

Query: 340 IL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
            +  + GFK   R Y+     RE    +  E  +D  +P   DWR K    P  +Q  CG
Sbjct: 87  FVSTRNGFK---RNYKD--QPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQGQCG 141

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH-QAG 455
           SCWAFS  G LEGQ+  K+G +V  S+  LV C+    G  GC+G  ++   +Y     G
Sbjct: 142 SCWAFSATGSLEGQHFRKSGSMVSLSEQNLVGCSTDF-GNNGCEGGLMDDAFKYIRANKG 200

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNS 514
           +++EK YPY   NG    C + KS V            GSET +KK +   GP+SV +++
Sbjct: 201 IDTEKSYPY---NGTDGTCHFKKSTVGATDSGFVDIKEGSETQLKKAVATVGPISVAIDA 257

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
               F   +    ++  C    L H VL+VGYG  +   YW  +NSWG    DEG+ ++ 
Sbjct: 258 SHESFQFYSDGVYDEPECDSESLDHGVLVVGYGTLNGTDYWFVKNSWGTTWGDEGYIRMS 317

Query: 575 RG-NNACGIEQIAGYATIDVV 594
           R   N CG   IA  A+I +V
Sbjct: 318 RNKKNQCG---IASSASIPLV 335



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 121/237 (51%), Gaps = 31/237 (13%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +D  +P   DWR K    P  +Q  CGSCWAFS  G LEGQ+  K+G +V  S+  LV C
Sbjct: 115 EDFSLPKTVDWRTKGAVTPVKNQGQCGSCWAFSATGSLEGQHFRKSGSMVSLSEQNLVGC 174

Query: 67  AKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +     +GC+G   + + +Y     G+++EK YPY   NG    C + KS V   T   F
Sbjct: 175 STDFGNNGCEGGLMDDAFKYIRANKGIDTEKSYPY---NGTDGTCHFKKSTVGA-TDSGF 230

Query: 124 LHFN-GSET-MKKILYKYGPLSVLLN---------SDLIHDYNGTPIRKNDETCSPYDLG 172
           +    GSET +KK +   GP+SV ++         SD ++D         +  C    L 
Sbjct: 231 VDIKEGSETQLKKAVATVGPISVAIDASHESFQFYSDGVYD---------EPECDSESLD 281

Query: 173 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVV 228
           H VL+VGYG  +   YW V+NSWG    DEG+ ++ R   N CG   IA  A+I +V
Sbjct: 282 HGVLVVGYGTLNGTDYWFVKNSWGTTWGDEGYIRMSRNKKNQCG---IASSASIPLV 335



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 957  DVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGI 1015
            D V ++  C    L H VL+VGYG  +   YW V+NSWG    DEG+ ++ R   N CGI
Sbjct: 267  DGVYDEPECDSESLDHGVLVVGYGTLNGTDYWFVKNSWGTTWGDEGYIRMSRNKKNQCGI 326

Query: 1016 EQIA 1019
               A
Sbjct: 327  ASSA 330


>gi|402770507|gb|AFQ98388.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 8/223 (3%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 68  KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 123
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V    TG   
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYVE 229

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +     + +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG +
Sbjct: 230 IKAGCEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVK 289

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
               YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 290 GGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 8/223 (3%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 799 KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 854
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V    TG   
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYVE 229

Query: 855 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
           +     + +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG +
Sbjct: 230 IKAGCEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVK 289

Query: 915 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
               YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 290 GGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 119/224 (53%), Gaps = 9/224 (4%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           D  +P A DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 433 KQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKD 488
            Q  G  GC+G  +E   +Y     G+++EK YPY   +GE   C + K  V    TG  
Sbjct: 173 -QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYV 228

Query: 489 FLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
            +     + +KK +   GP+SV +++    F   +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGCEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           +    YWL +NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 1017
            V ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266  VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 326  QASYPLV 332


>gi|225444726|ref|XP_002278624.1| PREDICTED: thiol protease aleurain-like isoform 1 [Vitis vinifera]
 gi|147826441|emb|CAN62278.1| hypothetical protein VITISV_031382 [Vitis vinifera]
 gi|297738562|emb|CBI27807.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 148/318 (46%), Gaps = 34/318 (10%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEIL 707
            +F +F  + G+ Y   +EIK RFE F ++       ++K   Y    ++F+D       
Sbjct: 61  HSFASFAHRYGKSYKTVDEIKLRFEIFSENLKLIRSTNRKGLPYTLAVNQFAD------- 113

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGS 765
               + W E    R+ A  +     L    K  D  +P+  DWR+  +  P  DQ  CGS
Sbjct: 114 ----WTWEEFRRHRLGA-AQNCSATLKGNHKLTDVILPETKDWREDGIVSPIKDQGHCGS 168

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLE 822
           CW FS  G LE  YA   GK +  S+ QLV+CA   +  GC G     + EY  +  GL+
Sbjct: 169 CWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCHGGLPSQAFEYIKYNGGLD 228

Query: 823 SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSDL 881
           +E+ YPY   +G    C +    + +       +     + +K  +    P+SV    ++
Sbjct: 229 TEEAYPYTGLDG---TCKFSSENIGVQVLDSVNITLGAEDELKHAVAFVRPVSVAF--EV 283

Query: 882 IHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +HD   Y            +P D+ HAVL VGYG +D + YWL++NSWG    D G+FK+
Sbjct: 284 VHDFRFYKKGVYTSGTCGSTPMDVNHAVLAVGYGVEDGVAYWLIKNSWGENWGDNGYFKM 343

Query: 939 ERGNNACGIEQIAGYATI 956
           E G N CG+   + Y  +
Sbjct: 344 ELGKNMCGVATCSSYPVV 361



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 145/316 (45%), Gaps = 29/316 (9%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEIL 341
            +F +F  + G+ Y   +EIK RFE F ++       ++K   Y    ++F+D       
Sbjct: 61  HSFASFAHRYGKSYKTVDEIKLRFEIFSENLKLIRSTNRKGLPYTLAVNQFAD------- 113

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGS 399
               + W E    R+ A  +     L    K  D  +P+  DWR+  +  P  DQ  CGS
Sbjct: 114 ----WTWEEFRRHRLGA-AQNCSATLKGNHKLTDVILPETKDWREDGIVSPIKDQGHCGS 168

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLE 457
           CW FS  G LE  YA   GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GL+
Sbjct: 169 CWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCHGGLPSQAFEYIKYNGGLD 228

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-H 515
           +E+ YPY   +G    C +    + +          G+E  +K  +    P+SV     H
Sbjct: 229 TEEAYPYTGLDG---TCKFSSENIGVQVLDSVNITLGAEDELKHAVAFVRPVSVAFEVVH 285

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
              FY            +P D+ HAVL VGYG +D + YWL +NSWG    D G+FK+E 
Sbjct: 286 DFRFYKKGVYTSGTCGSTPMDVNHAVLAVGYGVEDGVAYWLIKNSWGENWGDNGYFKMEL 345

Query: 576 GNNACGIEQIAGYATI 591
           G N CG+   + Y  +
Sbjct: 346 GKNMCGVATCSSYPVV 361



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 12/225 (5%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P+  DWR+  +  P  DQ  CGSCW FS  G LE  YA   GK +  S+ QLV+CA
Sbjct: 142 DVILPETKDWREDGIVSPIKDQGHCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCA 201

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
              +  GC G     + EY  +  GL++E+ YPY   +G    C +    + +       
Sbjct: 202 GAFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGLDG---TCKFSSENIGVQVLDSVN 258

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGY 180
           +     + +K  +    P+SV    +++HD   Y            +P D+ HAVL VGY
Sbjct: 259 ITLGAEDELKHAVAFVRPVSVAF--EVVHDFRFYKKGVYTSGTCGSTPMDVNHAVLAVGY 316

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           G +D + YWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 317 GVEDGVAYWLIKNSWGENWGDNGYFKMELGKNMCGVATCSSYPVV 361



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V    TC  +P D+ HAVL VGYG +D + YWL++NSWG    D G+FK+E G N CG+ 
Sbjct: 294  VYTSGTCGSTPMDVNHAVLAVGYGVEDGVAYWLIKNSWGENWGDNGYFKMELGKNMCGVA 353

Query: 1017 QIAGYATI 1024
              + Y  +
Sbjct: 354  TCSSYPVV 361


>gi|351700981|gb|EHB03900.1| Cathepsin H [Heterocephalus glaber]
          Length = 334

 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 155/321 (48%), Gaps = 40/321 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 709
           FK+++++  ++Y+  +E   R + F     K + H K     +   ++FSD S +EI  K
Sbjct: 34  FKSWMMQHQKEYST-KEYHHRQQIFASNWRKINAHNKGNHTFKMALNQFSDMSFDEI--K 90

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             + WSE   +   A +             GP P + DWRKK N      +Q ACGSCW 
Sbjct: 91  RKYLWSEP--QNCSATKSNY------FRGTGPYPTSVDWRKKGNFVSAVKNQGACGSCWT 142

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI +GK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E 
Sbjct: 143 FSTTGALESAVAIASGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 202

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGSETMKKILYKYGPLSVL--LNSDL 881
            YPY+  +G    C +   K   F  KD ++   N  E M + +  Y P+S    +  D 
Sbjct: 203 TYPYEGKDGH---CRFQPQKAIAFV-KDIVNITLNDEEAMVEAVALYNPVSFAYEVTEDF 258

Query: 882 IH----DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           +      Y+ T   K     +P  + HAVL VGYG    +PYW+V+NSWG    + G+F 
Sbjct: 259 MSYKRGIYSSTSCHK-----TPDKVNHAVLAVGYGVDHGVPYWIVKNSWGTQWGNNGYFL 313

Query: 938 IERGNNACGIEQIAGYATIDV 958
           IERG N CG+   A Y    V
Sbjct: 314 IERGKNMCGLAACASYPIPQV 334



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 151/321 (47%), Gaps = 39/321 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 343
           FK+++++  ++Y+  +E   R + F     K + H K     +   ++FSD S +EI  K
Sbjct: 34  FKSWMMQHQKEYST-KEYHHRQQIFASNWRKINAHNKGNHTFKMALNQFSDMSFDEI--K 90

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             + WSE   +   A +             GP P + DWRKK N      +Q ACGSCW 
Sbjct: 91  RKYLWSEP--QNCSATKSNY------FRGTGPYPTSVDWRKKGNFVSAVKNQGACGSCWT 142

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI +GK++  ++ QLV+CA+  +  G   GL  Q  EY  +  G+  E 
Sbjct: 143 FSTTGALESAVAIASGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGED 202

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVG------L 512
            YPY   +G    C +   K   F  KD   +  N  E M + +  Y P+S         
Sbjct: 203 TYPYEGKDGH---CRFQPQKAIAFV-KDIVNITLNDEEAMVEAVALYNPVSFAYEVTEDF 258

Query: 513 NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
            S+    Y+ T   K     +P  + HAVL VGYG    +PYW+ +NSWG    + G+F 
Sbjct: 259 MSYKRGIYSSTSCHK-----TPDKVNHAVLAVGYGVDHGVPYWIVKNSWGTQWGNNGYFL 313

Query: 573 IERGNNACGIEQIAGYATIDV 593
           IERG N CG+   A Y    V
Sbjct: 314 IERGKNMCGLAACASYPIPQV 334



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 21/231 (9%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N      +Q  CGSCW FS  G LE   AI +GK++  ++ QLV+CA
Sbjct: 113 GPYPTSVDWRKKGNFVSAVKNQGACGSCWTFSTTGALESAVAIASGKMLSLAEQQLVDCA 172

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD +
Sbjct: 173 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYEGKDGH---CRFQPQKAIAFV-KDIV 228

Query: 125 H--FNGSETMKKILYKYGPLSVL--LNSDLIH----DYNGTPIRKNDETCSPYDLGHAVL 176
           +   N  E M + +  Y P+S    +  D +      Y+ T   K     +P  + HAVL
Sbjct: 229 NITLNDEEAMVEAVALYNPVSFAYEVTEDFMSYKRGIYSSTSCHK-----TPDKVNHAVL 283

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
            VGYG    +PYW+V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 284 AVGYGVDHGVPYWIVKNSWGTQWGNNGYFLIERGKNMCGLAACASYPIPQV 334



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 37/61 (60%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            +P  + HAVL VGYG    +PYW+V+NSWG    + G+F IERG N CG+   A Y    
Sbjct: 274  TPDKVNHAVLAVGYGVDHGVPYWIVKNSWGTQWGNNGYFLIERGKNMCGLAACASYPIPQ 333

Query: 1026 V 1026
            V
Sbjct: 334  V 334


>gi|53748485|emb|CAH59428.1| cysteine protease 2 [Plantago major]
          Length = 245

 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 127/253 (50%), Gaps = 36/253 (14%)

Query: 724 ADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKT 783
           AD  K  K+         +P+ +DWR+K       +Q +CGSCW+FS  G LEG   + T
Sbjct: 1   ADENKAPKLPTS-----NLPEEFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGANYLAT 55

Query: 784 GKLVEFSKSQLVECAKQC----------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNA 832
           G+L+  S+ QLV+C  +C          +GC+G     + EY  +A GL+ EKDYPY   
Sbjct: 56  GELISLSEQQLVDCDHECDPEEGADSCDAGCNGGLMNNAFEYALKAGGLQKEKDYPYTGK 115

Query: 833 NGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK 892
           +G    C +DK+K+        +     + +   L KYGPL+V +N+  +  Y G     
Sbjct: 116 DG---TCKFDKTKIAASVHNFSVVSIDEDQIAANLVKYGPLAVGINAAWMQTYIGG---- 168

Query: 893 NDETCSPY----DLGHAVLLVGYG------KQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
                 PY     L H VL+VGYG      +  N PYW+++NSWG    + G++KI RG 
Sbjct: 169 ---VSCPYICGKSLDHGVLIVGYGTGYAPVRLKNKPYWIIKNSWGESWGESGYYKICRGR 225

Query: 943 NACGIEQIAGYAT 955
           N CG+E +    T
Sbjct: 226 NVCGVESMVSSVT 238



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 121/235 (51%), Gaps = 31/235 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR+K       +Q  CGSCW+FS  G LEG   + TG+L+  S+ QLV+C  +C
Sbjct: 14  LPEEFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGANYLATGELISLSEQQLVDCDHEC 73

Query: 71  ----------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
                     +GC+G     + EY  +A GL+ EKDYPY   +G    C +DK+K+    
Sbjct: 74  DPEEGADSCDAGCNGGLMNNAFEYALKAGGLQKEKDYPYTGKDG---TCKFDKTKIAASV 130

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 175
               +     + +   L KYGPL+V +N+  +  Y G           PY     L H V
Sbjct: 131 HNFSVVSIDEDQIAANLVKYGPLAVGINAAWMQTYIGG-------VSCPYICGKSLDHGV 183

Query: 176 LLVGYG------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           L+VGYG      +  N PYW+++NSWG    + G++KI RG N CG+E +    T
Sbjct: 184 LIVGYGTGYAPVRLKNKPYWIIKNSWGESWGESGYYKICRGRNVCGVESMVSSVT 238



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 127/253 (50%), Gaps = 35/253 (13%)

Query: 358 ADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKT 417
           AD  K  K+         +P+ +DWR+K       +Q +CGSCW+FS  G LEG   + T
Sbjct: 1   ADENKAPKLPTS-----NLPEEFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGANYLAT 55

Query: 418 GKLVEFSKSQLVECAKQC-------SGCGGCDG--LEQPIEYTHQA-GLESEKDYPYRNG 467
           G+L+  S+ QLV+C  +C       S   GC+G  +    EY  +A GL+ EKDYPY   
Sbjct: 56  GELISLSEQQLVDCDHECDPEEGADSCDAGCNGGLMNNAFEYALKAGGLQKEKDYPYTGK 115

Query: 468 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRK 527
           +G    C +DK+K+        +     + +   L KYGPL+VG+N+  +  Y G     
Sbjct: 116 DG---TCKFDKTKIAASVHNFSVVSIDEDQIAANLVKYGPLAVGINAAWMQTYIGG---- 168

Query: 528 NDETCSPY----DLGHAVLLVGYG------KQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
                 PY     L H VL+VGYG      +  + PYW+ +NSWG    + G++KI RG 
Sbjct: 169 ---VSCPYICGKSLDHGVLIVGYGTGYAPVRLKNKPYWIIKNSWGESWGESGYYKICRGR 225

Query: 578 NACGIEQIAGYAT 590
           N CG+E +    T
Sbjct: 226 NVCGVESMVSSVT 238



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 6/60 (10%)

Query: 970  LGHAVLLVGYG------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            L H VL+VGYG      +  + PYW+++NSWG    + G++KI RG N CG+E +    T
Sbjct: 179  LDHGVLIVGYGTGYAPVRLKNKPYWIIKNSWGESWGESGYYKICRGRNVCGVESMVSSVT 238


>gi|332326587|gb|AEE42617.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 140/303 (46%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGC+G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCNGGLMTQAFEWLLRNMNGTMLT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY ++ G+  +C      V       ++    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYESGVL----TSCAGDALNHGVLLVGYNXTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 139/304 (45%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGC G   + Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCNG-GLMTQAFEWLLRNMNGTML 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY +  G+  +C      V       ++    SET M   L K GP+S+ +++  
Sbjct: 210 TEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G
Sbjct: 270 FMSYESGVL----TSCAGDALNHGVLLVGYNXTGEVPYWVIKNSWGEDWGEKGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +E Q+A+   +L   S+ QLV C  + 
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC+G     + E+        + +E  YPY ++ G+  +C      V       ++   
Sbjct: 186 SGCNGGLMTQAFEWLLRNMNGTMLTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +
Sbjct: 246 SSETVMAAWLAKSGPISIAVDASSFMSYESGVL----TSCAGDALNHGVLLVGYNXTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCAGDALNHGVLLVGYNXTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|119573900|gb|EAW53515.1| cathepsin K (pycnodysostosis), isoform CRA_a [Homo sapiens]
          Length = 288

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 150/289 (51%), Gaps = 23/289 (7%)

Query: 672 DEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVE 730
           +E +   +E +K+  H+K       ++++++ EE++ K TG K        +     +  
Sbjct: 19  EEILDTHWELWKKT-HRK-------QYNNKTSEEVVQKMTGLK--------VPLSHSRSN 62

Query: 731 KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFS 790
             L   E +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S
Sbjct: 63  DTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLS 122

Query: 791 KSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKL 848
              LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K   
Sbjct: 123 PQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAK 179

Query: 849 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 908
             G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL 
Sbjct: 180 CRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLA 239

Query: 909 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 240 VGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 288



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 150/290 (51%), Gaps = 24/290 (8%)

Query: 306 DEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVE 364
           +E +   +E +K+  H+K       ++++++ EE++ K TG K        +     +  
Sbjct: 19  EEILDTHWELWKKT-HRK-------QYNNKTSEEVVQKMTGLK--------VPLSHSRSN 62

Query: 365 KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFS 424
             L   E +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S
Sbjct: 63  DTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLS 122

Query: 425 KSQLVECAKQCSGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVK 482
              LV+C  +  GCGG   +    +Y  +  G++SE  YPY    G++  C Y+ + K  
Sbjct: 123 PQNLVDCVSENDGCGG-GYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAA 178

Query: 483 LFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVL 542
              G   +     + +K+ + + GP+SV +++ L  F   +     DE+C+  +L HAVL
Sbjct: 179 KCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVL 238

Query: 543 LVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
            VGYG Q    +W+ +NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 239 AVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 288



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 122/223 (54%), Gaps = 6/223 (2%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           E +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+
Sbjct: 69  EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVD 128

Query: 66  CAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDF 123
           C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   
Sbjct: 129 CVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYRE 185

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q
Sbjct: 186 IPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ 245

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
               +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 246 KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 288



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 225  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 284

Query: 1021 YATI 1024
            +  +
Sbjct: 285  FPKM 288


>gi|332326589|gb|AEE42618.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 138/302 (45%), Gaps = 24/302 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
              G  +     +       K    L        VPDA DWR+K    P  DQ ACGSCW
Sbjct: 98  YLNGAAYFAAAKQHAGQHHRKARADL------SAVPDAVDWREKGAVTPVKDQGACGSCW 151

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESE 824
           AFS  G +E Q+A+   +L   S+ QLV C  + SGC+G     + E+        + +E
Sbjct: 152 AFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCNGGLMTQAFEWLLRNMNGTMLTE 211

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIH 883
             YPY ++ G+  +C      V       ++    SET M   L K GP+S+ +++    
Sbjct: 212 DSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDASSFM 271

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
            Y    +     +C+   L H VLLVGY +   +PYW+++NSWG    ++G+ ++  G N
Sbjct: 272 SYESGVL----TSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMGVN 327

Query: 944 AC 945
           AC
Sbjct: 328 AC 329



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 137/303 (45%), Gaps = 25/303 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
              G  +     +       K    L        VPDA DWR+K    P  DQ ACGSCW
Sbjct: 98  YLNGAAYFAAAKQHAGQHHRKARADL------SAVPDAVDWREKGAVTPVKDQGACGSCW 151

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLES 458
           AFS  G +E Q+A+   +L   S+ QLV C  + SGC G   + Q  E+        + +
Sbjct: 152 AFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCNG-GLMTQAFEWLLRNMNGTMLT 210

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLI 517
           E  YPY +  G+  +C      V       ++    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDASSF 270

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
             Y    +     +C+   L H VLLVGY +  ++PYW+ +NSWG    ++G+ ++  G 
Sbjct: 271 MSYESGVL----TSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 578 NAC 580
           NAC
Sbjct: 327 NAC 329



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +E Q+A+   +L   S+ QLV C  + 
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC+G     + E+        + +E  YPY ++ G+  +C      V       ++   
Sbjct: 186 SGCNGGLMTQAFEWLLRNMNGTMLTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +
Sbjct: 246 SSETVMAAWLAKSGPISIAVDASSFMSYESGVL----TSCAGDALNHGVLLVGYNRTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 34/50 (68%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY +  ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|47076309|emb|CAD89795.1| putative cathepsin L protease [Meloidogyne incognita]
          Length = 383

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 153/315 (48%), Gaps = 18/315 (5%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF---KQDGHKKHERYGTSEFSDRSPEEILCKTGFKW 714
           ++A+  K G+ Y N +E  ER   +   KQ   K    Y     S +  E  +    F  
Sbjct: 71  WQAYKEKHGKSYPNQDEDNERMLAYLSAKQFIEKHQRDYTEGRVSFQVGENHMADVPFNQ 130

Query: 715 SERT--YERIVAD---REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             +   ++R++ D   R+      +       +P++ DWR K +     +Q  CGSCWAF
Sbjct: 131 YRKLNGFKRLLGDAVTRKNASSTFLPPLNMYAIPESVDWRDKGLVTSVKNQGMCGSCWAF 190

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAK----QCSGCDGCFFEPSIEYTH-QAGLESE 824
           S  G LEGQ++ K G LV  S+  L++C K       GC+G   + + +Y     G+++E
Sbjct: 191 SATGALEGQHSRKLGTLVSLSEQNLIDCTKGEPYGNMGCNGGLMDNAFQYIEDNKGVDTE 250

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 883
             YPYK  NG+  KC + +S V    TG   L     + +K  +   GP+SV +++    
Sbjct: 251 NSYPYKAKNGK--KCLFKRSNVGATDTGYVDLPSGDEDKLKIAVATQGPISVAIDAGHRS 308

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-NIPYWLVRNSWGPIGPDEGFFKIERG- 941
                    ++E CSP +LGH VL+VGYG  D +  YWLV+NSWG    + G+ ++ R  
Sbjct: 309 FQLYAHGVYDEEACSPDNLGHGVLVVGYGTDDIHGDYWLVKNSWGEHWGENGYIRMSRNK 368

Query: 942 NNACGIEQIAGYATI 956
           +N CGI   A Y  +
Sbjct: 369 DNQCGIASKASYPLV 383



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 156/316 (49%), Gaps = 19/316 (6%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF---KQDGHKKHERYGTSEFSDRSPEEILCKTGFKW 348
           ++A+  K G+ Y N +E  ER   +   KQ   K    Y     S +  E  +    F  
Sbjct: 71  WQAYKEKHGKSYPNQDEDNERMLAYLSAKQFIEKHQRDYTEGRVSFQVGENHMADVPFNQ 130

Query: 349 SERT--YERIVAD---REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             +   ++R++ D   R+      +       +P++ DWR K +     +Q  CGSCWAF
Sbjct: 131 YRKLNGFKRLLGDAVTRKNASSTFLPPLNMYAIPESVDWRDKGLVTSVKNQGMCGSCWAF 190

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAK-QCSGCGGCDG--LEQPIEYTH-QAGLESE 459
           S  G LEGQ++ K G LV  S+  L++C K +  G  GC+G  ++   +Y     G+++E
Sbjct: 191 SATGALEGQHSRKLGTLVSLSEQNLIDCTKGEPYGNMGCNGGLMDNAFQYIEDNKGVDTE 250

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
             YPY+  NG+  KC + +S V    TG   L     + +K  +   GP+SV +++    
Sbjct: 251 NSYPYKAKNGK--KCLFKRSNVGATDTGYVDLPSGDEDKLKIAVATQGPISVAIDAGHRS 308

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI--PYWLARNSWGPIGPDEGFFKIERG 576
           F        ++E CSP +LGH VL+VGYG  DDI   YWL +NSWG    + G+ ++ R 
Sbjct: 309 FQLYAHGVYDEEACSPDNLGHGVLVVGYGT-DDIHGDYWLVKNSWGEHWGENGYIRMSRN 367

Query: 577 -NNACGIEQIAGYATI 591
            +N CGI   A Y  +
Sbjct: 368 KDNQCGIASKASYPLV 383



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 120/223 (53%), Gaps = 10/223 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK-- 68
           +P++ DWR K +     +Q  CGSCWAFS  G LEGQ++ K G LV  S+  L++C K  
Sbjct: 163 IPESVDWRDKGLVTSVKNQGMCGSCWAFSATGALEGQHSRKLGTLVSLSEQNLIDCTKGE 222

Query: 69  --QCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFL 124
                GC+G   + + +Y     G+++E  YPYK  NG+  KC + +S V    TG   L
Sbjct: 223 PYGNMGCNGGLMDNAFQYIEDNKGVDTENSYPYKAKNGK--KCLFKRSNVGATDTGYVDL 280

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
                + +K  +   GP+SV +++             ++E CSP +LGH VL+VGYG  D
Sbjct: 281 PSGDEDKLKIAVATQGPISVAIDAGHRSFQLYAHGVYDEEACSPDNLGHGVLVVGYGTDD 340

Query: 185 -NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            +  YWLV+NSWG    + G+ ++ R  +N CGI   A Y  +
Sbjct: 341 IHGDYWLVKNSWGEHWGENGYIRMSRNKDNQCGIASKASYPLV 383



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 4/69 (5%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDI--PYWLVRNSWGPIGPDEGFFKIERG-NNACGI 1015
            V ++E CSP +LGH VL+VGYG  DDI   YWLV+NSWG    + G+ ++ R  +N CGI
Sbjct: 316  VYDEEACSPDNLGHGVLVVGYGT-DDIHGDYWLVKNSWGEHWGENGYIRMSRNKDNQCGI 374

Query: 1016 EQIAGYATI 1024
               A Y  +
Sbjct: 375  ASKASYPLV 383


>gi|358339356|dbj|GAA47436.1| cathepsin L [Clonorchis sinensis]
          Length = 236

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 116/218 (53%), Gaps = 6/218 (2%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +P ++DWR+  V     DQ  CGSCWAF++ G +EGQ+  KT KLV  S+ QL++C K+ 
Sbjct: 21  LPGSFDWRQHGVVTEVKDQGMCGSCWAFAVTGNIEGQWYKKTKKLVSLSEQQLLDCDKKD 80

Query: 802 SGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
             C+G F E + E      GL SEKDYPY+     K  C    + +  +           
Sbjct: 81  EACNGGFPEWAYESIVKMGGLMSEKDYPYE---AHKETCNLKPNNISAYINDSVTLSKDE 137

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD--NIP 918
           + +   L + GP+SV +N++ +  Y G         CS   L HAVLLVGYG       P
Sbjct: 138 KELAAWLTENGPISVGMNANFLQFYFGGVSHPPHMLCSEQGLDHAVLLVGYGVTSFWQRP 197

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           YW+V+NSWG    ++G+F+I RG+  CGI   A  + +
Sbjct: 198 YWIVKNSWGRSWGEKGYFRIYRGDGTCGINADATSSIV 235



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 116/218 (53%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P ++DWR+  V     DQ  CGSCWAF++ G +EGQ+  KT KLV  S+ QL++C K+ 
Sbjct: 21  LPGSFDWRQHGVVTEVKDQGMCGSCWAFAVTGNIEGQWYKKTKKLVSLSEQQLLDCDKKD 80

Query: 71  SGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
             C+G F E + E      GL SEKDYPY+     K  C    + +  +           
Sbjct: 81  EACNGGFPEWAYESIVKMGGLMSEKDYPYE---AHKETCNLKPNNISAYINDSVTLSKDE 137

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD--NIP 187
           + +   L + GP+SV +N++ +  Y G         CS   L HAVLLVGYG       P
Sbjct: 138 KELAAWLTENGPISVGMNANFLQFYFGGVSHPPHMLCSEQGLDHAVLLVGYGVTSFWQRP 197

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           YW+V+NSWG    ++G+F+I RG+  CGI   A  + +
Sbjct: 198 YWIVKNSWGRSWGEKGYFRIYRGDGTCGINADATSSIV 235



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 111/218 (50%), Gaps = 5/218 (2%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P ++DWR+  V     DQ  CGSCWAF++ G +EGQ+  KT KLV  S+ QL++C K+ 
Sbjct: 21  LPGSFDWRQHGVVTEVKDQGMCGSCWAFAVTGNIEGQWYKKTKKLVSLSEQQLLDCDKKD 80

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
             C G              GL SEKDYPY      K  C    + +  +           
Sbjct: 81  EACNGGFPEWAYESIVKMGGLMSEKDYPYE---AHKETCNLKPNNISAYINDSVTLSKDE 137

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD--DIP 553
           + +   L + GP+SVG+N++ + FY G         CS   L HAVLLVGYG       P
Sbjct: 138 KELAAWLTENGPISVGMNANFLQFYFGGVSHPPHMLCSEQGLDHAVLLVGYGVTSFWQRP 197

Query: 554 YWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           YW+ +NSWG    ++G+F+I RG+  CGI   A  + +
Sbjct: 198 YWIVKNSWGRSWGEKGYFRIYRGDGTCGINADATSSIV 235



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 2/62 (3%)

Query: 965  CSPYDLGHAVLLVGYGKQD--DIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 1022
            CS   L HAVLLVGYG       PYW+V+NSWG    ++G+F+I RG+  CGI   A  +
Sbjct: 174  CSEQGLDHAVLLVGYGVTSFWQRPYWIVKNSWGRSWGEKGYFRIYRGDGTCGINADATSS 233

Query: 1023 TI 1024
             +
Sbjct: 234  IV 235


>gi|343470212|emb|CCD17026.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 150/319 (47%), Gaps = 26/319 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPEAVDWRKKGAVTPVKDQGKC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
            S WAF++ G +EGQ+ I   +L   S+  LV C     GC   F + + ++   ++   
Sbjct: 148 DSSWAFTVIGNIEGQWKIAGHELTSLSEQMLVSCDTNDLGCRAGFMDTAFKWIVSSNNGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLN 878
           + +E+ YPY +  G    C  +KS KV      D +H  +    + + L K GP+++ ++
Sbjct: 208 VFTEQSYPYASGGGNVPTC--NKSGKVVGANIDDHVHILDNENAIAEWLAKKGPVAIAVD 265

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +     Y G  +     +C   ++  A LLVGY      PYW+++NSW     +EG+ +I
Sbjct: 266 ATSFQSYTGGVL----TSCISKEVNSAALLVGYDDTSKPPYWIIKNSWSKGWGEEGYIRI 321

Query: 939 ERGNNACGIEQIAGYATID 957
           E+G N C +++    A + 
Sbjct: 322 EKGTNQCRMKEYVSSAVVS 340



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 142/317 (44%), Gaps = 21/317 (6%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPEAVDWRKKGAVTPVKDQGKC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC--GGCDGLEQPIEYTHQAG 455
            S WAF++ G +EGQ+ I   +L   S+  LV C     GC  G  D   + I  ++   
Sbjct: 148 DSSWAFTVIGNIEGQWKIAGHELTSLSEQMLVSCDTNDLGCRAGFMDTAFKWIVSSNNGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           + +E+ YPY +G G    C      V           +    + + L K GP+++ +++ 
Sbjct: 208 VFTEQSYPYASGGGNVPTCNKSGKVVGANIDDHVHILDNENAIAEWLAKKGPVAIAVDAT 267

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
               Y G  +     +C   ++  A LLVGY      PYW+ +NSW     +EG+ +IE+
Sbjct: 268 SFQSYTGGVL----TSCISKEVNSAALLVGYDDTSKPPYWIIKNSWSKGWGEEGYIRIEK 323

Query: 576 GNNACGIEQIAGYATID 592
           G N C +++    A + 
Sbjct: 324 GTNQCRMKEYVSSAVVS 340



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 11/223 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P+A DWRKK    P  DQ  C S WAF++ G +EGQ+ I   +L   S+  LV C  
Sbjct: 124 GKAPEAVDWRKKGAVTPVKDQGKCDSSWAFTVIGNIEGQWKIAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFL 124
              GC   F + + ++   ++   + +E+ YPY +  G    C  +KS KV      D +
Sbjct: 184 NDLGCRAGFMDTAFKWIVSSNNGNVFTEQSYPYASGGGNVPTC--NKSGKVVGANIDDHV 241

Query: 125 H-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           H  +    + + L K GP+++ +++     Y G  +     +C   ++  A LLVGY   
Sbjct: 242 HILDNENAIAEWLAKKGPVAIAVDATSFQSYTGGVL----TSCISKEVNSAALLVGYDDT 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
              PYW+++NSW     +EG+ +IE+G N C +++    A + 
Sbjct: 298 SKPPYWIIKNSWSKGWGEEGYIRIEKGTNQCRMKEYVSSAVVS 340



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 35/62 (56%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C   ++  A LLVGY      PYW+++NSW     +EG+ +IE+G N C +++    A 
Sbjct: 279  SCISKEVNSAALLVGYDDTSKPPYWIIKNSWSKGWGEEGYIRIEKGTNQCRMKEYVSSAV 338

Query: 1024 ID 1025
            + 
Sbjct: 339  VS 340


>gi|395545396|ref|XP_003774588.1| PREDICTED: cathepsin W [Sarcophilus harrisii]
          Length = 358

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 160/327 (48%), Gaps = 28/327 (8%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTS 696
           SL     ++ E FKAF ++  + Y +  E + R + F           + H+   ++G +
Sbjct: 32  SLLPVTRDLRERFKAFQIQYNKSYPDAAEQECRLKIFADNLARAQQLTEEHQGLAQFGVT 91

Query: 697 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            FSD + EE   +  ++ S+  Y  +    E      ++  K      + DWRK  V  P
Sbjct: 92  RFSDLTEEEF--RRLYQPSQPNYLGLRVKTEGGGYPRLQRLKT----RSCDWRKARVLTP 145

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEY 815
             DQ  C SCWA S  G +E  +AI   +L + S  +L++C +   GC+G F ++  +  
Sbjct: 146 VRDQKNCNSCWAISAVGNVEALWAINYQQLFKLSVQELLDCRRCGQGCEGGFVWDAYMTI 205

Query: 816 THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET------MKKILYK 869
            +Q+GL  E+DYPY+    +   C   K +  +    DFL  +  E       M + L +
Sbjct: 206 LNQSGLAEEQDYPYRPQLSKG--CQKKKKRAWI---HDFLMLHKEENSPSPPDMAQYLAE 260

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GP++V +NS L+  Y    I+  +  C P  + H V LVG+G+  N  YW+++NSWG  
Sbjct: 261 KGPITVTINSRLLKSYIRGVIKPGN-NCDPKYVDHVVQLVGFGQIHNFTYWILKNSWGSS 319

Query: 930 GPDEGFFKIERGNNACGIEQIAGYATI 956
             ++G+F++ RG NACGI +    A +
Sbjct: 320 WGEKGYFRLHRGRNACGITKFPLTAVL 346



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 156/327 (47%), Gaps = 27/327 (8%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTS 330
           SL     ++ E FKAF ++  + Y +  E + R + F           + H+   ++G +
Sbjct: 32  SLLPVTRDLRERFKAFQIQYNKSYPDAAEQECRLKIFADNLARAQQLTEEHQGLAQFGVT 91

Query: 331 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            FSD + EE   +  ++ S+  Y  +    E      ++  K      + DWRK  V  P
Sbjct: 92  RFSDLTEEEF--RRLYQPSQPNYLGLRVKTEGGGYPRLQRLKT----RSCDWRKARVLTP 145

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY 450
             DQ  C SCWA S  G +E  +AI   +L + S  +L++C +   GC G    +  +  
Sbjct: 146 VRDQKNCNSCWAISAVGNVEALWAINYQQLFKLSVQELLDCRRCGQGCEGGFVWDAYMTI 205

Query: 451 THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET------MKKILYK 504
            +Q+GL  E+DYPYR    +   C   K +  +    DFL  +  E       M + L +
Sbjct: 206 LNQSGLAEEQDYPYRPQLSK--GCQKKKKRAWI---HDFLMLHKEENSPSPPDMAQYLAE 260

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPI 564
            GP++V +NS L+  Y    I+  +  C P  + H V LVG+G+  +  YW+ +NSWG  
Sbjct: 261 KGPITVTINSRLLKSYIRGVIKPGN-NCDPKYVDHVVQLVGFGQIHNFTYWILKNSWGSS 319

Query: 565 GPDEGFFKIERGNNACGIEQIAGYATI 591
             ++G+F++ RG NACGI +    A +
Sbjct: 320 WGEKGYFRLHRGRNACGITKFPLTAVL 346



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 117/217 (53%), Gaps = 13/217 (5%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWRK  V  P  DQ +C SCWA S  G +E  +AI   +L + S  +L++C +   GC+G
Sbjct: 136 DWRKARVLTPVRDQKNCNSCWAISAVGNVEALWAINYQQLFKLSVQELLDCRRCGQGCEG 195

Query: 76  CF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET--- 131
            F ++  +   +Q+GL  E+DYPY+    +   C   K +  +    DFL  +  E    
Sbjct: 196 GFVWDAYMTILNQSGLAEEQDYPYRPQLSKG--CQKKKKRAWI---HDFLMLHKEENSPS 250

Query: 132 ---MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
              M + L + GP++V +NS L+  Y    I+  +  C P  + H V LVG+G+  N  Y
Sbjct: 251 PPDMAQYLAEKGPITVTINSRLLKSYIRGVIKPGN-NCDPKYVDHVVQLVGFGQIHNFTY 309

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+++NSWG    ++G+F++ RG NACGI +    A +
Sbjct: 310 WILKNSWGSSWGEKGYFRLHRGRNACGITKFPLTAVL 346



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 927  GPIGPDEGFFKIERGNNACGIEQIAGYATID-VVKNDETCSPYDLGHAVLLVGYGKQDDI 985
             P  PD   +  E+G     I      + I  V+K    C P  + H V LVG+G+  + 
Sbjct: 248  SPSPPDMAQYLAEKGPITVTINSRLLKSYIRGVIKPGNNCDPKYVDHVVQLVGFGQIHNF 307

Query: 986  PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
             YW+++NSWG    ++G+F++ RG NACGI +    A +
Sbjct: 308  TYWILKNSWGSSWGEKGYFRLHRGRNACGITKFPLTAVL 346


>gi|225448924|ref|XP_002266821.1| PREDICTED: cysteine proteinase 15A-like [Vitis vinifera]
          Length = 375

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 54/338 (15%)

Query: 649 FDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSE 697
           F  + +L T   F+ F+ K G++Y++ EE   R   F ++  +  E         +G + 
Sbjct: 49  FGVDGVLGTEKEFRMFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDPTALHGVTP 108

Query: 698 FSDRSPEEILCKTGFKWSERTYERIVAD---REKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           FSD S EE          ER +  +V     +  V +    +E DG +P+++DWR+K   
Sbjct: 109 FSDLSEEEF---------ERMFTGVVGRPHMKGGVAETAAALEVDG-LPESFDWREKGAV 158

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCD 805
                Q  CGSCWAFS  G +EG + I T KL+  S+ QLV+C   C         SGC+
Sbjct: 159 TEVKMQGTCGSCWAFSTTGAVEGAHFISTKKLLTLSEQQLVDCDHMCDIRDKTACDSGCE 218

Query: 806 GCFFEPSIEYTHQA-GLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETM 863
           G     + +Y  +A GLE E  YPY   +GE KFK      +V  FT            +
Sbjct: 219 GGLMTNAYKYLIEAGGLEEESSYPYTGKHGECKFKPDRVAVRVVNFTEVPI----NENQI 274

Query: 864 KKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNI--- 917
              L  +GPL+V LN+  +  Y G    P+      C    + H VLLVGYG +      
Sbjct: 275 AANLVCHGPLAVGLNAIFMQTYIGGVSCPL-----ICPKRWINHGVLLVGYGAKGYSILR 329

Query: 918 ----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 951
               PYW+++NSWG    + G++++ RG+  CG+  + 
Sbjct: 330 FGYKPYWIIKNSWGKRWGEHGYYRLCRGHGMCGMNTMV 367



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 160/338 (47%), Gaps = 53/338 (15%)

Query: 283 FDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSE 331
           F  + +L T   F+ F+ K G++Y++ EE   R   F ++  +  E         +G + 
Sbjct: 49  FGVDGVLGTEKEFRMFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDPTALHGVTP 108

Query: 332 FSDRSPEEILCKTGFKWSERTYERIVAD---REKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           FSD S EE          ER +  +V     +  V +    +E DG +P+++DWR+K   
Sbjct: 109 FSDLSEEEF---------ERMFTGVVGRPHMKGGVAETAAALEVDG-LPESFDWREKGAV 158

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCD 442
                Q  CGSCWAFS  G +EG + I T KL+  S+ QLV+C   C     + C  GC+
Sbjct: 159 TEVKMQGTCGSCWAFSTTGAVEGAHFISTKKLLTLSEQQLVDCDHMCDIRDKTACDSGCE 218

Query: 443 G--LEQPIEYTHQA-GLESEKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSETM 498
           G  +    +Y  +A GLE E  YPY   +GE KFK      +V  FT            +
Sbjct: 219 GGLMTNAYKYLIEAGGLEEESSYPYTGKHGECKFKPDRVAVRVVNFTEVPI----NENQI 274

Query: 499 KKILYKYGPLSVGLNSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDDI--- 552
              L  +GPL+VGLN+  +  Y G    P+      C    + H VLLVGYG +      
Sbjct: 275 AANLVCHGPLAVGLNAIFMQTYIGGVSCPL-----ICPKRWINHGVLLVGYGAKGYSILR 329

Query: 553 ----PYWLARNSWGPIGPDEGFFKIERGNNACGIEQIA 586
               PYW+ +NSWG    + G++++ RG+  CG+  + 
Sbjct: 330 FGYKPYWIIKNSWGKRWGEHGYYRLCRGHGMCGMNTMV 367



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 118/237 (49%), Gaps = 31/237 (13%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           +E DG +P+++DWR+K        Q  CGSCWAFS  G +EG + I T KL+  S+ QLV
Sbjct: 141 LEVDG-LPESFDWREKGAVTEVKMQGTCGSCWAFSTTGAVEGAHFISTKKLLTLSEQQLV 199

Query: 65  ECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE-KFKCAYDKS 113
           +C   C         SGC+G     + +Y  +A GLE E  YPY   +GE KFK      
Sbjct: 200 DCDHMCDIRDKTACDSGCEGGLMTNAYKYLIEAGGLEEESSYPYTGKHGECKFKPDRVAV 259

Query: 114 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYD 170
           +V  FT            +   L  +GPL+V LN+  +  Y G    P+      C    
Sbjct: 260 RVVNFTEVPI----NENQIAANLVCHGPLAVGLNAIFMQTYIGGVSCPL-----ICPKRW 310

Query: 171 LGHAVLLVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           + H VLLVGYG +          PYW+++NSWG    + G++++ RG+  CG+  + 
Sbjct: 311 INHGVLLVGYGAKGYSILRFGYKPYWIIKNSWGKRWGEHGYYRLCRGHGMCGMNTMV 367



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 940  RGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLVRN 992
             G  A G+  I     I  V     C    + H VLLVGYG +          PYW+++N
Sbjct: 281  HGPLAVGLNAIFMQTYIGGVSCPLICPKRWINHGVLLVGYGAKGYSILRFGYKPYWIIKN 340

Query: 993  SWGPIGPDEGFFKIERGNNACGIEQIA 1019
            SWG    + G++++ RG+  CG+  + 
Sbjct: 341  SWGKRWGEHGYYRLCRGHGMCGMNTMV 367


>gi|300175452|emb|CBK20763.2| unnamed protein product [Blastocystis hominis]
          Length = 313

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 154/332 (46%), Gaps = 43/332 (12%)

Query: 640 TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHE 691
            +A+  SL ++N     TF +F  + G+ Y N  E   R + F        K +      
Sbjct: 10  AIALATSLRYEN-----TFNSFEARYGKNYINAAERAFRQKVFAYNMEWAQKINSEDHPY 64

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
             G + F+D      +  T F  S+     +     K    +ME     P  +A DWR+K
Sbjct: 65  TVGATPFAD------MTNTEFAVSKLCGCMLKPKMTKPATPIME-----PAAEAVDWREK 113

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  +QA+CGSCWAFS  G +EG+  +  G+L+  S+ QLV+C  Q SGC G     
Sbjct: 114 GAVTPVKNQASCGSCWAFSATGAMEGRNFVANGELISLSEQQLVDCDHQSSGCGGGLMTY 173

Query: 812 SIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG--KDFLHFNGSETMKKILYK 869
           + EY  + G+  E+DYPY   + +   C  DK    +F    ++   F+G+   + +   
Sbjct: 174 AFEYAKKKGMCKEEDYPYHAVDED---CKDDKCTPVVFPKGYEEVPRFDGAALKQAV--S 228

Query: 870 YGPLSVLLNSDLI--HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927
            GP+SV + +D I    Y G  I   D +     L H VL VGYG      YW+V+NSWG
Sbjct: 229 QGPVSVAVEADSIVFQMYTGGVI---DSSACGTSLNHGVLAVGYGAD----YWIVKNSWG 281

Query: 928 PIGPDEGFFKI---ERGNNACGIEQIAGYATI 956
               D+G+ KI   E G   CGI Q+  Y T 
Sbjct: 282 ESWGDKGYLKIKYTESGAGICGINQMNSYPTF 313



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 44/333 (13%)

Query: 274 TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHE 325
            +A+  SL ++N     TF +F  + G+ Y N  E   R + F        K +      
Sbjct: 10  AIALATSLRYEN-----TFNSFEARYGKNYINAAERAFRQKVFAYNMEWAQKINSEDHPY 64

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
             G + F+D      +  T F  S+     +     K    +ME     P  +A DWR+K
Sbjct: 65  TVGATPFAD------MTNTEFAVSKLCGCMLKPKMTKPATPIME-----PAAEAVDWREK 113

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
               P  +QA+CGSCWAFS  G +EG+  +  G+L+  S+ QLV+C  Q SGCGG   + 
Sbjct: 114 GAVTPVKNQASCGSCWAFSATGAMEGRNFVANGELISLSEQQLVDCDHQSSGCGG-GLMT 172

Query: 446 QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTG--KDFLYFNGSETMKKILY 503
              EY  + G+  E+DYPY   + +   C  DK    +F    ++   F+G+   + +  
Sbjct: 173 YAFEYAKKKGMCKEEDYPYHAVDED---CKDDKCTPVVFPKGYEEVPRFDGAALKQAV-- 227

Query: 504 KYGPLSVGLNSHLIHF--YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
             GP+SV + +  I F  Y G  I   D +     L H VL VGYG      YW+ +NSW
Sbjct: 228 SQGPVSVAVEADSIVFQMYTGGVI---DSSACGTSLNHGVLAVGYGAD----YWIVKNSW 280

Query: 562 GPIGPDEGFFKI---ERGNNACGIEQIAGYATI 591
           G    D+G+ KI   E G   CGI Q+  Y T 
Sbjct: 281 GESWGDKGYLKIKYTESGAGICGINQMNSYPTF 313



 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 115/223 (51%), Gaps = 19/223 (8%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P  +A DWR+K    P  +QA CGSCWAFS  G +EG+  +  G+L+  S+ QLV+C  Q
Sbjct: 103 PAAEAVDWREKGAVTPVKNQASCGSCWAFSATGAMEGRNFVANGELISLSEQQLVDCDHQ 162

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG--KDFLHFN 127
            SGC G     + EY  + G+  E+DYPY   + +   C  DK    +F    ++   F+
Sbjct: 163 SSGCGGGLMTYAFEYAKKKGMCKEEDYPYHAVDED---CKDDKCTPVVFPKGYEEVPRFD 219

Query: 128 GSETMKKILYKYGPLSVLLNSDLI--HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           G+   + +    GP+SV + +D I    Y G  I   D +     L H VL VGYG    
Sbjct: 220 GAALKQAV--SQGPVSVAVEADSIVFQMYTGGVI---DSSACGTSLNHGVLAVGYGAD-- 272

Query: 186 IPYWLVRNSWGPIGPDEGFFKI---ERGNNACGIEQIAGYATI 225
             YW+V+NSWG    D+G+ KI   E G   CGI Q+  Y T 
Sbjct: 273 --YWIVKNSWGESWGDKGYLKIKYTESGAGICGINQMNSYPTF 313



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 7/66 (10%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKI---ERGNNACGIEQI 1018
            D +     L H VL VGYG      YW+V+NSWG    D+G+ KI   E G   CGI Q+
Sbjct: 252  DSSACGTSLNHGVLAVGYGAD----YWIVKNSWGESWGDKGYLKIKYTESGAGICGINQM 307

Query: 1019 AGYATI 1024
              Y T 
Sbjct: 308  NSYPTF 313


>gi|256077197|ref|XP_002574894.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230780|emb|CCD77197.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 419

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 148/318 (46%), Gaps = 27/318 (8%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRSP 337
           N+ E +  F +K  +QY   E+ + RF  FK +  K       ER    YG + +SD + 
Sbjct: 115 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 173

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 174 DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 226

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG---CDGLEQPIEYTHQA 454
           GSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC G    +  E  I+     
Sbjct: 227 GSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGLPSNAYESIIK---MG 283

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E +YPY   N    KC      V ++             +   LY    +SVG+N+
Sbjct: 284 GLMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNA 340

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIPYWLARNSWGPIGPDEGFFKI 573
            L+ FY           CS Y L HAVLLVGYG  + + P+W+ +NSWG    + G+F++
Sbjct: 341 LLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRM 400

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+  CGI  +A  A I
Sbjct: 401 YRGDGTCGINTVATSALI 418



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 147/317 (46%), Gaps = 26/317 (8%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRSP 703
           N+ E +  F +K  +QY   E+ + RF  FK +  K       ER    YG + +SD + 
Sbjct: 115 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 173

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 174 DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 226

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC+G    PS  Y       G
Sbjct: 227 GSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGL--PSNAYESIIKMGG 284

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           L  E +YPY   N    KC      V ++             +   LY    +SV +N+ 
Sbjct: 285 LMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNAL 341

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           L+  Y           CS Y L HAVLLVGYG  + N P+W+V+NSWG    + G+F++ 
Sbjct: 342 LLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMY 401

Query: 940 RGNNACGIEQIAGYATI 956
           RG+  CGI  +A  A I
Sbjct: 402 RGDGTCGINTVATSALI 418



 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 109/219 (49%), Gaps = 9/219 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K       +Q  CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C    
Sbjct: 205 IPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLD 264

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC+G    PS  Y       GL  E +YPY   N    KC      V ++         
Sbjct: 265 DGCNGGL--PSNAYESIIKMGGLMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLTQ 319

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNI 186
               +   LY    +SV +N+ L+  Y           CS Y L HAVLLVGYG  + N 
Sbjct: 320 DETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNE 379

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           P+W+V+NSWG    + G+F++ RG+  CGI  +A  A I
Sbjct: 380 PFWIVKNSWGVEWGENGYFRMYRGDGTCGINTVATSALI 418


>gi|332326581|gb|AEE42614.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 138/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCGGGLMTQAFEWLLRNMNGTMXT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY ++ G+   C      V       ++    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSTGDVPACTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYXSGVL----TSCAGKXLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 139/304 (45%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGCGG   + Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCGG-GLMTQAFEWLLRNMNGTMX 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY +  G+   C      V       ++    SET M   L K GP+S+ +++  
Sbjct: 210 TEDSYPYVSSTGDVPACTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G
Sbjct: 270 FMSYXSGVL----TSCAGKXLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +E Q+A+   +L   S+ QLV C  + 
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC G     + E+        + +E  YPY ++ G+   C      V       ++   
Sbjct: 186 SGCGGGLMTQAFEWLLRNMNGTMXTEDSYPYVSSTGDVPACTNSSQLVPGARIDGYVTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +
Sbjct: 246 SSETVMAAWLAKSGPISIAVDASSFMSYXSGVL----TSCAGKXLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCAGKXLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|256077193|ref|XP_002574892.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230781|emb|CCD77198.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 457

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 148/318 (46%), Gaps = 27/318 (8%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRSP 337
           N+ E +  F +K  +QY   E+ + RF  FK +  K       ER    YG + +SD + 
Sbjct: 153 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 211

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 212 DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 264

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG---CDGLEQPIEYTHQA 454
           GSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC G    +  E  I+     
Sbjct: 265 GSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGLPSNAYESIIK---MG 321

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E +YPY   N    KC      V ++             +   LY    +SVG+N+
Sbjct: 322 GLMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNA 378

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIPYWLARNSWGPIGPDEGFFKI 573
            L+ FY           CS Y L HAVLLVGYG  + + P+W+ +NSWG    + G+F++
Sbjct: 379 LLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRM 438

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+  CGI  +A  A I
Sbjct: 439 YRGDGTCGINTVATSALI 456



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 147/317 (46%), Gaps = 26/317 (8%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRSP 703
           N+ E +  F +K  +QY   E+ + RF  FK +  K       ER    YG + +SD + 
Sbjct: 153 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 211

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 212 DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 264

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC+G    PS  Y       G
Sbjct: 265 GSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGL--PSNAYESIIKMGG 322

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           L  E +YPY   N    KC      V ++             +   LY    +SV +N+ 
Sbjct: 323 LMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNAL 379

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           L+  Y           CS Y L HAVLLVGYG  + N P+W+V+NSWG    + G+F++ 
Sbjct: 380 LLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMY 439

Query: 940 RGNNACGIEQIAGYATI 956
           RG+  CGI  +A  A I
Sbjct: 440 RGDGTCGINTVATSALI 456



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 109/219 (49%), Gaps = 9/219 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K       +Q  CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C    
Sbjct: 243 IPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLD 302

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC+G    PS  Y       GL  E +YPY   N    KC      V ++         
Sbjct: 303 DGCNGGL--PSNAYESIIKMGGLMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLTQ 357

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNI 186
               +   LY    +SV +N+ L+  Y           CS Y L HAVLLVGYG  + N 
Sbjct: 358 DETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNE 417

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           P+W+V+NSWG    + G+F++ RG+  CGI  +A  A I
Sbjct: 418 PFWIVKNSWGVEWGENGYFRMYRGDGTCGINTVATSALI 456


>gi|403367386|gb|EJY83513.1| Cathepsin L [Oxytricha trifallax]
          Length = 339

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 170/346 (49%), Gaps = 47/346 (13%)

Query: 630 ITDQVVARVDTLAIEGSLTFDNENILET---------FKAFIVKRGRQYANDEEIKERFE 680
           IT  VV  V  +A+       +   L T         F  ++ K G+ Y   EE + RF+
Sbjct: 6   ITLAVVGTVAAIAVVALSEMPSSTSLYTMEVTQENVDFANYLAKYGKSYGTKEEFQFRFQ 65

Query: 681 YFKQD----GHKKHERYGT-----SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK 731
            ++Q+     H       T     ++F+D +P E     G+K   +      A+ +  E 
Sbjct: 66  QYQQNMALIAHHNSNNENTFTLASNKFADYTPAEYKKLLGYKRMPK------ANAQYAEF 119

Query: 732 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 791
            L  V      PD+ DWR K    P  DQ  CGSCWAFS  G LEG+ AI TG L  +S+
Sbjct: 120 DLTAV------PDSIDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGRDAIATGTLQSYSE 173

Query: 792 SQLVECAKQC---SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAY--DKSKV 846
            QLV+C        GC+G     +++Y+ +  LE E DYPYK  +G   KC+Y  DK   
Sbjct: 174 QQLVDCDYSTDGNQGCNGGDMGLAMDYSAKNPLELESDYPYKAIDG---KCSYKADKGHS 230

Query: 847 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGH 904
           K   G   +  N    +K  + + GP+SV + +D  +   YNG  +  N ++C   +L H
Sbjct: 231 K-NKGHTNVKQNSLPDLKAAIAQ-GPVSVAIEADTMVFQFYNGGIL--NSKSCGT-NLDH 285

Query: 905 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER--GNNACGIE 948
            VL VGYG ++N PY++V+NSWGP   ++G+ +I +  G   CGI+
Sbjct: 286 GVLAVGYGSENNKPYYIVKNSWGPSWGEQGYLRIAQVDGAGICGIQ 331



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 171/346 (49%), Gaps = 46/346 (13%)

Query: 264 ITDQVVARVDTLAIEGSLTFDNENILET---------FKAFIVKRGRQYANDEEIKERFE 314
           IT  VV  V  +A+       +   L T         F  ++ K G+ Y   EE + RF+
Sbjct: 6   ITLAVVGTVAAIAVVALSEMPSSTSLYTMEVTQENVDFANYLAKYGKSYGTKEEFQFRFQ 65

Query: 315 YFKQD----GHKKHERYGT-----SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK 365
            ++Q+     H       T     ++F+D +P E     G+K   +      A+ +  E 
Sbjct: 66  QYQQNMALIAHHNSNNENTFTLASNKFADYTPAEYKKLLGYKRMPK------ANAQYAEF 119

Query: 366 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 425
            L  V      PD+ DWR K    P  DQ  CGSCWAFS  G LEG+ AI TG L  +S+
Sbjct: 120 DLTAV------PDSIDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGRDAIATGTLQSYSE 173

Query: 426 SQLVECAKQCSGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAY--DKSKV 481
            QLV+C     G  GC+G  +   ++Y+ +  LE E DYPY+  +G   KC+Y  DK   
Sbjct: 174 QQLVDCDYSTDGNQGCNGGDMGLAMDYSAKNPLELESDYPYKAIDG---KCSYKADKGHS 230

Query: 482 KLFTGKDFLYFNGSETMKKILYKYGPLSVGL--NSHLIHFYNGTPIRKNDETCSPYDLGH 539
           K   G   +  N    +K  + + GP+SV +  ++ +  FYNG  +  N ++C   +L H
Sbjct: 231 K-NKGHTNVKQNSLPDLKAAIAQ-GPVSVAIEADTMVFQFYNGGIL--NSKSCGT-NLDH 285

Query: 540 AVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER--GNNACGIE 583
            VL VGYG +++ PY++ +NSWGP   ++G+ +I +  G   CGI+
Sbjct: 286 GVLAVGYGSENNKPYYIVKNSWGPSWGEQGYLRIAQVDGAGICGIQ 331



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/216 (40%), Positives = 123/216 (56%), Gaps = 17/216 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD+ DWR K    P  DQ  CGSCWAFS  G LEG+ AI TG L  +S+ QLV+C    
Sbjct: 124 VPDSIDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGRDAIATGTLQSYSEQQLVDCDYST 183

Query: 71  ---SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLH 125
               GC+G     +++Y+ +  LE E DYPYK  +G   KC+Y  DK   K   G   + 
Sbjct: 184 DGNQGCNGGDMGLAMDYSAKNPLELESDYPYKAIDG---KCSYKADKGHSK-NKGHTNVK 239

Query: 126 FNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            N    +K  + + GP+SV + +D  +   YNG  +  N ++C   +L H VL VGYG +
Sbjct: 240 QNSLPDLKAAIAQ-GPVSVAIEADTMVFQFYNGGIL--NSKSCGT-NLDHGVLAVGYGSE 295

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIER--GNNACGIE 217
           +N PY++V+NSWGP   ++G+ +I +  G   CGI+
Sbjct: 296 NNKPYYIVKNSWGPSWGEQGYLRIAQVDGAGICGIQ 331



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 3/60 (5%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER--GNNACGIE 1016
            + N ++C   +L H VL VGYG +++ PY++V+NSWGP   ++G+ +I +  G   CGI+
Sbjct: 273  ILNSKSCGT-NLDHGVLAVGYGSENNKPYYIVKNSWGPSWGEQGYLRIAQVDGAGICGIQ 331


>gi|308808478|ref|XP_003081549.1| Cysteine proteinase Cathepsin F (ISS) [Ostreococcus tauri]
 gi|116060014|emb|CAL56073.1| Cysteine proteinase Cathepsin F (ISS), partial [Ostreococcus tauri]
          Length = 293

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 143/291 (49%), Gaps = 37/291 (12%)

Query: 683 KQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME--VEKDG 740
           +Q   +   ++G + FSD +PEE         +ER    +    E  EK+     V +D 
Sbjct: 9   QQANDRGSAKHGVTRFSDLTPEEF--------AERYLGHVKLSSEHREKVRARGGVIEDL 60

Query: 741 P---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 797
           P   +P  +DWR K       DQ  CGSCW FS  G +EG + I TGKLVE S+ QL++C
Sbjct: 61  PTKHLPAEFDWRFKGAVSRVKDQGQCGSCWTFSTTGAIEGAHFISTGKLVELSEQQLLDC 120

Query: 798 AKQC---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVK 847
              C         SGC+G     ++EY     G+++EK YPY    GEK +C  D+  + 
Sbjct: 121 DVGCDPDVPNACDSGCNGGLPSNAMEYIVEHGGIDTEKSYPYV---GEKGECKADEGTLG 177

Query: 848 LFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 906
             T K+F + +  E  M   L K+GPLS+ +N+  +  Y G         C    L H V
Sbjct: 178 A-TLKNFSYVSSDEKQMAAALVKHGPLSIGINAAWMQTYIGG--VACPWLCDSEALDHGV 234

Query: 907 LLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           L+VGYG       +    PYW+V+NSW P   + G+++I +   +CGI  +
Sbjct: 235 LIVGYGSSGFAPVRWQQEPYWIVKNSWSPAWGEGGYYRICKDKGSCGINNM 285



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 143/293 (48%), Gaps = 40/293 (13%)

Query: 317 KQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME--VEKDG 374
           +Q   +   ++G + FSD +PEE         +ER    +    E  EK+     V +D 
Sbjct: 9   QQANDRGSAKHGVTRFSDLTPEEF--------AERYLGHVKLSSEHREKVRARGGVIEDL 60

Query: 375 P---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 431
           P   +P  +DWR K       DQ  CGSCW FS  G +EG + I TGKLVE S+ QL++C
Sbjct: 61  PTKHLPAEFDWRFKGAVSRVKDQGQCGSCWTFSTTGAIEGAHFISTGKLVELSEQQLLDC 120

Query: 432 AKQC---------SGCGGCDGL-EQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSK 480
              C         SGC G  GL    +EY     G+++EK YPY    GEK +C  D+  
Sbjct: 121 DVGCDPDVPNACDSGCNG--GLPSNAMEYIVEHGGIDTEKSYPYV---GEKGECKADEGT 175

Query: 481 VKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGH 539
           +   T K+F Y +  E  M   L K+GPLS+G+N+  +  Y G         C    L H
Sbjct: 176 LGA-TLKNFSYVSSDEKQMAAALVKHGPLSIGINAAWMQTYIGG--VACPWLCDSEALDH 232

Query: 540 AVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
            VL+VGYG       +    PYW+ +NSW P   + G+++I +   +CGI  +
Sbjct: 233 GVLIVGYGSSGFAPVRWQQEPYWIVKNSWSPAWGEGGYYRICKDKGSCGINNM 285



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 117/227 (51%), Gaps = 24/227 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K       DQ  CGSCW FS  G +EG + I TGKLVE S+ QL++C   C
Sbjct: 65  LPAEFDWRFKGAVSRVKDQGQCGSCWTFSTTGAIEGAHFISTGKLVELSEQQLLDCDVGC 124

Query: 71  ---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     ++EY     G+++EK YPY    GEK +C  D+  +   T 
Sbjct: 125 DPDVPNACDSGCNGGLPSNAMEYIVEHGGIDTEKSYPYV---GEKGECKADEGTLGA-TL 180

Query: 121 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
           K+F + +  E  M   L K+GPLS+ +N+  +  Y G         C    L H VL+VG
Sbjct: 181 KNFSYVSSDEKQMAAALVKHGPLSIGINAAWMQTYIGG--VACPWLCDSEALDHGVLIVG 238

Query: 180 YG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           YG       +    PYW+V+NSW P   + G+++I +   +CGI  +
Sbjct: 239 YGSSGFAPVRWQQEPYWIVKNSWSPAWGEGGYYRICKDKGSCGINNM 285



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 7/61 (11%)

Query: 965  CSPYDLGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 1017
            C    L H VL+VGYG       +    PYW+V+NSW P   + G+++I +   +CGI  
Sbjct: 225  CDSEALDHGVLIVGYGSSGFAPVRWQQEPYWIVKNSWSPAWGEGGYYRICKDKGSCGINN 284

Query: 1018 I 1018
            +
Sbjct: 285  M 285


>gi|378943060|gb|AFC76271.1| cathepsin L-like protease [Leishmania major]
          Length = 348

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 147/326 (45%), Gaps = 31/326 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYTSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NACGIEQIAGYATIDVVKNDETCSPY 968
           NAC    + GY    +V    T  PY
Sbjct: 327 NAC---LLTGYPVSVLVSQSPT--PY 347



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 150/321 (46%), Gaps = 32/321 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYTSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNACGIEQIAGYATIDVVIQ 596
           G NAC    + GY    +V Q
Sbjct: 325 GVNAC---LLTGYPVSVLVSQ 342



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 112/224 (50%), Gaps = 11/224 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYTSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQ 230
           PYW+++NSWG    ++G+ ++  G NAC    + GY    +V Q
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC---LLTGYPVSVLVSQ 342


>gi|147809367|emb|CAN64491.1| hypothetical protein VITISV_015725 [Vitis vinifera]
          Length = 321

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 154/326 (47%), Gaps = 51/326 (15%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 709
           F+ F+ K G++Y++ EE   R   F ++  +  E         +G + FSD S EE    
Sbjct: 7   FRMFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDPXALHGVTPFSDLSEEEF--- 63

Query: 710 TGFKWSERTYERIVAD---REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
                 ER +  +V     +  V +    +E DG +P+++DWR+K        Q  CGSC
Sbjct: 64  ------ERMFTGVVGRPHMKGGVAETAAALEVDG-LPESFDWREKGAVTEVKMQGTCGSC 116

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTH 817
           WAFS  G +EG + I T KL+  S+ QLV+C   C         SGC+G     + +Y  
Sbjct: 117 WAFSTTGAVEGAHFISTKKLLTLSEQQLVDCDHMCDIRDKXACDSGCEGGLMTNAYKYLI 176

Query: 818 QA-GLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSV 875
           +A GLE E  YPY   +GE KFK      +V  FT            +   L  +GPL+V
Sbjct: 177 EAGGLEEESSYPYTGKHGECKFKPDRVAVRVVNFTEVPI----BENQIAANLVCHGPLAV 232

Query: 876 LLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNI-------PYWLVRNS 925
            LN+  +  Y G    P+      C    + H VLLVGYG +          PYW+++NS
Sbjct: 233 GLNAXFMQTYIGGVSCPL-----ICPKRWINHGVLLVGYGAKGYSILRFGYKPYWIIKNS 287

Query: 926 WGPIGPDEGFFKIERGNNACGIEQIA 951
           WG    + G++++ RG+  CG+  + 
Sbjct: 288 WGXRWGEHGYYRLCRGHGMCGMNTMV 313



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 154/326 (47%), Gaps = 50/326 (15%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 343
           F+ F+ K G++Y++ EE   R   F ++  +  E         +G + FSD S EE    
Sbjct: 7   FRMFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDPXALHGVTPFSDLSEEEF--- 63

Query: 344 TGFKWSERTYERIVAD---REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
                 ER +  +V     +  V +    +E DG +P+++DWR+K        Q  CGSC
Sbjct: 64  ------ERMFTGVVGRPHMKGGVAETAAALEVDG-LPESFDWREKGAVTEVKMQGTCGSC 116

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEYTH 452
           WAFS  G +EG + I T KL+  S+ QLV+C   C       C  GC+G  +    +Y  
Sbjct: 117 WAFSTTGAVEGAHFISTKKLLTLSEQQLVDCDHMCDIRDKXACDSGCEGGLMTNAYKYLI 176

Query: 453 QA-GLESEKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSV 510
           +A GLE E  YPY   +GE KFK      +V  FT            +   L  +GPL+V
Sbjct: 177 EAGGLEEESSYPYTGKHGECKFKPDRVAVRVVNFTEVPI----BENQIAANLVCHGPLAV 232

Query: 511 GLNSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLARNS 560
           GLN+  +  Y G    P+      C    + H VLLVGYG +          PYW+ +NS
Sbjct: 233 GLNAXFMQTYIGGVSCPL-----ICPKRWINHGVLLVGYGAKGYSILRFGYKPYWIIKNS 287

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIA 586
           WG    + G++++ RG+  CG+  + 
Sbjct: 288 WGXRWGEHGYYRLCRGHGMCGMNTMV 313



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 118/237 (49%), Gaps = 31/237 (13%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           +E DG +P+++DWR+K        Q  CGSCWAFS  G +EG + I T KL+  S+ QLV
Sbjct: 87  LEVDG-LPESFDWREKGAVTEVKMQGTCGSCWAFSTTGAVEGAHFISTKKLLTLSEQQLV 145

Query: 65  ECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE-KFKCAYDKS 113
           +C   C         SGC+G     + +Y  +A GLE E  YPY   +GE KFK      
Sbjct: 146 DCDHMCDIRDKXACDSGCEGGLMTNAYKYLIEAGGLEEESSYPYTGKHGECKFKPDRVAV 205

Query: 114 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYD 170
           +V  FT            +   L  +GPL+V LN+  +  Y G    P+      C    
Sbjct: 206 RVVNFTEVPI----BENQIAANLVCHGPLAVGLNAXFMQTYIGGVSCPL-----ICPKRW 256

Query: 171 LGHAVLLVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           + H VLLVGYG +          PYW+++NSWG    + G++++ RG+  CG+  + 
Sbjct: 257 INHGVLLVGYGAKGYSILRFGYKPYWIIKNSWGXRWGEHGYYRLCRGHGMCGMNTMV 313



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 7/62 (11%)

Query: 965  CSPYDLGHAVLLVGYGKQDDI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 1017
            C    + H VLLVGYG +          PYW+++NSWG    + G++++ RG+  CG+  
Sbjct: 252  CPKRWINHGVLLVGYGAKGYSILRFGYKPYWIIKNSWGXRWGEHGYYRLCRGHGMCGMNT 311

Query: 1018 IA 1019
            + 
Sbjct: 312  MV 313


>gi|340370276|ref|XP_003383672.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/222 (40%), Positives = 120/222 (54%), Gaps = 14/222 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           VPD  DW++K    P  +Q  CGSCW+FS  G LEGQ+ I TG LV  S+ QL++C+ + 
Sbjct: 109 VPDTVDWKEKGAVTPIKNQGQCGSCWSFSSTGSLEGQHFINTGTLVSLSEQQLMDCSTKY 168

Query: 70  -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
              GC+G   + S  Y    AG E+E +YPY   NG    C YD S + + T K ++   
Sbjct: 169 GNHGCNGGLMDNSFRYLKSVAGDETEDNYPYTAENG---VCRYD-SSLAVVTDKSYVDIP 224

Query: 127 NGSE-TMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            G E ++K  +   GP+SV +++       YN      +  TCS   L H VL +GYG +
Sbjct: 225 QGDEDSLKDAVANVGPISVAIDASHSSFQLYNSGVYYAS--TCSSTQLDHGVLAIGYGTE 282

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 224
           D   YWLV+NSWG     EG+ K+ R  NN CGI   A Y T
Sbjct: 283 DGKDYWLVKNSWGTSWGMEGYIKMSRNRNNNCGIATQASYPT 324



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/222 (40%), Positives = 120/222 (54%), Gaps = 14/222 (6%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
           VPD  DW++K    P  +Q  CGSCW+FS  G LEGQ+ I TG LV  S+ QL++C+ + 
Sbjct: 109 VPDTVDWKEKGAVTPIKNQGQCGSCWSFSSTGSLEGQHFINTGTLVSLSEQQLMDCSTKY 168

Query: 801 -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 857
              GC+G   + S  Y    AG E+E +YPY   NG    C YD S + + T K ++   
Sbjct: 169 GNHGCNGGLMDNSFRYLKSVAGDETEDNYPYTAENG---VCRYD-SSLAVVTDKSYVDIP 224

Query: 858 NGSE-TMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
            G E ++K  +   GP+SV +++       YN      +  TCS   L H VL +GYG +
Sbjct: 225 QGDEDSLKDAVANVGPISVAIDASHSSFQLYNSGVYYAS--TCSSTQLDHGVLAIGYGTE 282

Query: 915 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 955
           D   YWLV+NSWG     EG+ K+ R  NN CGI   A Y T
Sbjct: 283 DGKDYWLVKNSWGTSWGMEGYIKMSRNRNNNCGIATQASYPT 324



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 121/223 (54%), Gaps = 15/223 (6%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DW++K    P  +Q  CGSCW+FS  G LEGQ+ I TG LV  S+ QL++C+ + 
Sbjct: 109 VPDTVDWKEKGAVTPIKNQGQCGSCWSFSSTGSLEGQHFINTGTLVSLSEQQLMDCSTKY 168

Query: 436 SGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            G  GC+G  ++    Y    AG E+E +YPY   NG    C YD S + + T K ++  
Sbjct: 169 -GNHGCNGGLMDNSFRYLKSVAGDETEDNYPYTAENG---VCRYD-SSLAVVTDKSYVDI 223

Query: 493 -NGSE-TMKKILYKYGPLSVGLNSHLIHF--YNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
             G E ++K  +   GP+SV +++    F  YN      +  TCS   L H VL +GYG 
Sbjct: 224 PQGDEDSLKDAVANVGPISVAIDASHSSFQLYNSGVYYAS--TCSSTQLDHGVLAIGYGT 281

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 590
           +D   YWL +NSWG     EG+ K+ R  NN CGI   A Y T
Sbjct: 282 EDGKDYWLVKNSWGTSWGMEGYIKMSRNRNNNCGIATQASYPT 324



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYA 1022
            TCS   L H VL +GYG +D   YWLV+NSWG     EG+ K+ R  NN CGI   A Y 
Sbjct: 264  TCSSTQLDHGVLAIGYGTEDGKDYWLVKNSWGTSWGMEGYIKMSRNRNNNCGIATQASYP 323

Query: 1023 T 1023
            T
Sbjct: 324  T 324


>gi|343477446|emb|CCD11725.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 26/319 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGKC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAG 820
            S WAF++ G +EGQ+ I   +L   S+  LV C     GC   F + + ++    +   
Sbjct: 148 DSSWAFTVIGNIEGQWKIAGHELTSLSEQMLVSCDTNDLGCRAGFMDTAFKWIVSPNDGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLN 878
           + +E+ YPY +  G    C  +KS KV      D +H  +    + + L K GP+++ ++
Sbjct: 208 VFTEQSYPYASGGGNVPAC--NKSGKVVGANIDDHVHILDNENAIAEWLAKNGPVAIAVD 265

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +     Y G  +     +C   ++  A LLVGY      PYW+++NSWG    +EG+ +I
Sbjct: 266 ATSFQRYTGGVL----TSCISKEVNSAALLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRI 321

Query: 939 ERGNNACGIEQIAGYATID 957
           E+G N C ++     A + 
Sbjct: 322 EKGTNQCRMKDYVSSAVVS 340



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 141/317 (44%), Gaps = 21/317 (6%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGKC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC--GGCDGLEQPIEYTHQAG 455
            S WAF++ G +EGQ+ I   +L   S+  LV C     GC  G  D   + I   +   
Sbjct: 148 DSSWAFTVIGNIEGQWKIAGHELTSLSEQMLVSCDTNDLGCRAGFMDTAFKWIVSPNDGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           + +E+ YPY +G G    C      V           +    + + L K GP+++ +++ 
Sbjct: 208 VFTEQSYPYASGGGNVPACNKSGKVVGANIDDHVHILDNENAIAEWLAKNGPVAIAVDAT 267

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
               Y G  +     +C   ++  A LLVGY      PYW+ +NSWG    +EG+ +IE+
Sbjct: 268 SFQRYTGGVL----TSCISKEVNSAALLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRIEK 323

Query: 576 GNNACGIEQIAGYATID 592
           G N C ++     A + 
Sbjct: 324 GTNQCRMKDYVSSAVVS 340



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 11/223 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P+A DWRKK    P  DQ  C S WAF++ G +EGQ+ I   +L   S+  LV C  
Sbjct: 124 GKAPEAVDWRKKGAVTPVKDQGKCDSSWAFTVIGNIEGQWKIAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFL 124
              GC   F + + ++    +   + +E+ YPY +  G    C  +KS KV      D +
Sbjct: 184 NDLGCRAGFMDTAFKWIVSPNDGNVFTEQSYPYASGGGNVPAC--NKSGKVVGANIDDHV 241

Query: 125 H-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           H  +    + + L K GP+++ +++     Y G  +     +C   ++  A LLVGY   
Sbjct: 242 HILDNENAIAEWLAKNGPVAIAVDATSFQRYTGGVL----TSCISKEVNSAALLVGYDDT 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
              PYW+++NSWG    +EG+ +IE+G N C ++     A + 
Sbjct: 298 SKPPYWIIKNSWGKGWGEEGYIRIEKGTNQCRMKDYVSSAVVS 340



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C   ++  A LLVGY      PYW+++NSWG    +EG+ +IE+G N C ++     A 
Sbjct: 279  SCISKEVNSAALLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRIEKGTNQCRMKDYVSSAV 338

Query: 1024 ID 1025
            + 
Sbjct: 339  VS 340


>gi|403371627|gb|EJY85692.1| Cysteine protease [Oxytricha trifallax]
          Length = 384

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 176/385 (45%), Gaps = 33/385 (8%)

Query: 592 DVVIQRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDN 651
           D  I+    + K ++ I     + G  + L L  ++  I  Q     D + +   +   N
Sbjct: 13  DQTIKNGSNKGKGLLKIVGTVAIVGTVAALALFGIS--INSQNGGLSDRMNLASKV---N 67

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQ--DGHKKHE-------RYGTSEFSDRS 702
             +   F  F+ +  + +   EE + R   F+   +  K H        + G ++FSD S
Sbjct: 68  PEVETAFNNFLARHSKSFLTKEEFRARLSNFRNTFEEVKLHNSIQGSNFKMGLNQFSDWS 127

Query: 703 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRKKNVTGPAGDQA 761
             EI     FK    T E    D E +++ L++ + D    P + DWR K    P  DQ 
Sbjct: 128 QSEIDEMLQFKEPLDTDEDNTND-EDLDQTLLKADGDLLQAPASIDWRAKGAVTPVLDQG 186

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFEPSIEYTHQ 818
            C SC+ FS A  +EG Y IKTGKL+E SK QL+EC+ +    SGC G +   + +Y   
Sbjct: 187 RCSSCYTFSAAHAVEGAYQIKTGKLIEMSKQQLLECSGRPYGNSGCRGGYMTNAYKYLKD 246

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             L+S+  YPY    G    C +D SK +        L  N    +   + K  P+S+ +
Sbjct: 247 NKLQSDASYPYTGTAGT---CKHDASKGITNVVSYTALPANDPTALLNAVAKQ-PVSIAI 302

Query: 878 --NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
             +S  +  Y    +   D      ++ HAV LVGYG ++ I YW+++NSWG    ++GF
Sbjct: 303 YASSSALLAYKSGIV---DTAKCGTNVNHAVTLVGYGSENGIDYWIIKNSWGAKWGEKGF 359

Query: 936 FKIER----GNNACGIEQIAGYATI 956
            +I+R    G   CGI +++   T+
Sbjct: 360 IRIKRDMTKGPGICGIYKLSSIPTV 384



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 176/386 (45%), Gaps = 34/386 (8%)

Query: 226 DVVIQRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDN 285
           D  I+    + K ++ I     + G  + L L  ++  I  Q     D + +   +   N
Sbjct: 13  DQTIKNGSNKGKGLLKIVGTVAIVGTVAALALFGIS--INSQNGGLSDRMNLASKV---N 67

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQ--DGHKKHE-------RYGTSEFSDRS 336
             +   F  F+ +  + +   EE + R   F+   +  K H        + G ++FSD S
Sbjct: 68  PEVETAFNNFLARHSKSFLTKEEFRARLSNFRNTFEEVKLHNSIQGSNFKMGLNQFSDWS 127

Query: 337 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRKKNVTGPAGDQA 395
             EI     FK    T E    D E +++ L++ + D    P + DWR K    P  DQ 
Sbjct: 128 QSEIDEMLQFKEPLDTDEDNTND-EDLDQTLLKADGDLLQAPASIDWRAKGAVTPVLDQG 186

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQ 453
            C SC+ FS A  +EG Y IKTGKL+E SK QL+EC+ +  G  GC G  +    +Y   
Sbjct: 187 RCSSCYTFSAAHAVEGAYQIKTGKLIEMSKQQLLECSGRPYGNSGCRGGYMTNAYKYLKD 246

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSK-VKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             L+S+  YPY    G    C +D SK +        L  N    +   + K  P+S+ +
Sbjct: 247 NKLQSDASYPY---TGTAGTCKHDASKGITNVVSYTALPANDPTALLNAVAKQ-PVSIAI 302

Query: 513 ---NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEG 569
              +S L+ + +G      D      ++ HAV LVGYG ++ I YW+ +NSWG    ++G
Sbjct: 303 YASSSALLAYKSGIV----DTAKCGTNVNHAVTLVGYGSENGIDYWIIKNSWGAKWGEKG 358

Query: 570 FFKIER----GNNACGIEQIAGYATI 591
           F +I+R    G   CGI +++   T+
Sbjct: 359 FIRIKRDMTKGPGICGIYKLSSIPTV 384



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 114/225 (50%), Gaps = 17/225 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
            P + DWR K    P  DQ  C SC+ FS A  +EG Y IKTGKL+E SK QL+EC+ + 
Sbjct: 167 APASIDWRAKGAVTPVLDQGRCSSCYTFSAAHAVEGAYQIKTGKLIEMSKQQLLECSGRP 226

Query: 70  --CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHF 126
              SGC G +   + +Y     L+S+  YPY    G    C +D SK +        L  
Sbjct: 227 YGNSGCRGGYMTNAYKYLKDNKLQSDASYPYTGTAGT---CKHDASKGITNVVSYTALPA 283

Query: 127 NGSETMKKILYKYGPLSVLL--NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
           N    +   + K  P+S+ +  +S  +  Y    +   D      ++ HAV LVGYG ++
Sbjct: 284 NDPTALLNAVAKQ-PVSIAIYASSSALLAYKSGIV---DTAKCGTNVNHAVTLVGYGSEN 339

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIER----GNNACGIEQIAGYATI 225
            I YW+++NSWG    ++GF +I+R    G   CGI +++   T+
Sbjct: 340 GIDYWIIKNSWGAKWGEKGFIRIKRDMTKGPGICGIYKLSSIPTV 384



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER----GNNACGIEQIAGYATI 1024
            ++ HAV LVGYG ++ I YW+++NSWG    ++GF +I+R    G   CGI +++   T+
Sbjct: 325  NVNHAVTLVGYGSENGIDYWIIKNSWGAKWGEKGFIRIKRDMTKGPGICGIYKLSSIPTV 384


>gi|157864845|ref|XP_001681131.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124425|emb|CAJ02281.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 31/326 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVST 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMTAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NACGIEQIAGYATIDVVKNDETCSPY 968
           NAC    + GY     V   ++ +PY
Sbjct: 327 NAC---LLTGYPV--SVHVSQSPTPY 347



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVS 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMTAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVSTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMTAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C    L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|357116897|ref|XP_003560213.1| PREDICTED: probable cysteine proteinase A494-like [Brachypodium
           distachyon]
          Length = 373

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 151/335 (45%), Gaps = 49/335 (14%)

Query: 658 FKAFIVKRGRQYAND-EEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILC 708
           F AF+ + G++Y+   EE   R   F                 R+G + FSD +PEE   
Sbjct: 54  FAAFVRRHGKEYSGGAEEYARRLRVFAANLARAAAHQALDPGARHGVTPFSDLTPEEFQA 113

Query: 709 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
           + TG +          A R   E++         +P ++DWR K        Q  CGSCW
Sbjct: 114 RLTGLQQQGTNNNMPAAARATAEELAT-------LPASFDWRAKGAVTEVKMQGMCGSCW 166

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQ 818
           AFS  G +EG + + TGKL+  S+ QLV+C   C         SGC G     +  Y  +
Sbjct: 167 AFSTTGAVEGAHFVATGKLLNLSEQQLVDCDHTCDAVAKNECDSGCSGGLMTNAYTYLIR 226

Query: 819 A-GLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVL 876
           A GL  +  YPY  A G    C +D +KV +  T    +  +  + ++  L + GPL+V 
Sbjct: 227 AGGLMEQAAYPYTGAQG---TCRFDANKVAVRVTSFTAVPPDDEDQIRASLVRAGPLAVG 283

Query: 877 LNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNI-------PYWLVRNSW 926
           LN+  +  Y G    P+      C    + H VLLVGYG +          PYW+++NSW
Sbjct: 284 LNAAFMQTYLGGVSCPL-----LCPRKLINHGVLLVGYGARGLAPLRLGYRPYWIIKNSW 338

Query: 927 GPIGPDEGFFKIERG---NNACGIEQIAGYATIDV 958
           G    + G++++ RG    N CG++ +     + +
Sbjct: 339 GKEWGEGGYYRLCRGARNRNVCGVDSMVSAVAVAL 373



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 149/335 (44%), Gaps = 48/335 (14%)

Query: 292 FKAFIVKRGRQYAND-EEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILC 342
           F AF+ + G++Y+   EE   R   F                 R+G + FSD +PEE   
Sbjct: 54  FAAFVRRHGKEYSGGAEEYARRLRVFAANLARAAAHQALDPGARHGVTPFSDLTPEEFQA 113

Query: 343 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
           + TG +          A R   E++         +P ++DWR K        Q  CGSCW
Sbjct: 114 RLTGLQQQGTNNNMPAAARATAEELAT-------LPASFDWRAKGAVTEVKMQGMCGSCW 166

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCG------GCDGLEQPIEYTH--- 452
           AFS  G +EG + + TGKL+  S+ QLV+C   C          GC G      YT+   
Sbjct: 167 AFSTTGAVEGAHFVATGKLLNLSEQQLVDCDHTCDAVAKNECDSGCSGGLMTNAYTYLIR 226

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSVG 511
             GL  +  YPY    G +  C +D +KV +  T    +  +  + ++  L + GPL+VG
Sbjct: 227 AGGLMEQAAYPY---TGAQGTCRFDANKVAVRVTSFTAVPPDDEDQIRASLVRAGPLAVG 283

Query: 512 LNSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLARNSW 561
           LN+  +  Y G    P+      C    + H VLLVGYG +          PYW+ +NSW
Sbjct: 284 LNAAFMQTYLGGVSCPL-----LCPRKLINHGVLLVGYGARGLAPLRLGYRPYWIIKNSW 338

Query: 562 GPIGPDEGFFKIERG---NNACGIEQIAGYATIDV 593
           G    + G++++ RG    N CG++ +     + +
Sbjct: 339 GKEWGEGGYYRLCRGARNRNVCGVDSMVSAVAVAL 373



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 119/247 (48%), Gaps = 32/247 (12%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
            E+   +P ++DWR K        Q  CGSCWAFS  G +EG + + TGKL+  S+ QLV
Sbjct: 135 AEELATLPASFDWRAKGAVTEVKMQGMCGSCWAFSTTGAVEGAHFVATGKLLNLSEQQLV 194

Query: 65  ECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK 114
           +C   C         SGC G     +  Y  +A GL  +  YPY  A G    C +D +K
Sbjct: 195 DCDHTCDAVAKNECDSGCSGGLMTNAYTYLIRAGGLMEQAAYPYTGAQG---TCRFDANK 251

Query: 115 VKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYD 170
           V +  T    +  +  + ++  L + GPL+V LN+  +  Y G    P+      C    
Sbjct: 252 VAVRVTSFTAVPPDDEDQIRASLVRAGPLAVGLNAAFMQTYLGGVSCPL-----LCPRKL 306

Query: 171 LGHAVLLVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIA 220
           + H VLLVGYG +          PYW+++NSWG    + G++++ RG    N CG++ + 
Sbjct: 307 INHGVLLVGYGARGLAPLRLGYRPYWIIKNSWGKEWGEGGYYRLCRGARNRNVCGVDSMV 366

Query: 221 GYATIDV 227
               + +
Sbjct: 367 SAVAVAL 373


>gi|6435586|pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435587|pdb|7PCK|B Chain B, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435588|pdb|7PCK|C Chain C, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435589|pdb|7PCK|D Chain D, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435592|pdb|1BY8|A Chain A, The Crystal Structure Of Human Procathepsin K
          Length = 314

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK   
Sbjct: 61  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYV 112

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 113 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 172

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + GP
Sbjct: 173 YVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 229

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 230 VSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 289

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 290 KGYILMARNKNNACGIANLASFPKM 314



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 136/266 (51%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK   
Sbjct: 61  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYV 112

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 113 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 171

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + G
Sbjct: 172 QYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 228

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 229 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 288

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKGYILMARNKNNACGIANLASFPKM 314



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 122/223 (54%), Gaps = 6/223 (2%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           E +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+
Sbjct: 95  EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVD 154

Query: 66  CAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDF 123
           C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   
Sbjct: 155 CVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYRE 211

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q
Sbjct: 212 IPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ 271

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
               +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 272 KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 314



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 251  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 310

Query: 1021 YATI 1024
            +  +
Sbjct: 311  FPKM 314


>gi|332326583|gb|AEE42615.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 138/302 (45%), Gaps = 24/302 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
              G  +     +       K    L        VPDA DWR+K    P  DQ ACGSCW
Sbjct: 98  YLNGAAYFAAAKQHAGQHHRKARADL------SAVPDAVDWREKGAVTPVKDQGACGSCW 151

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESE 824
           AFS  G +E Q+A+   +L   S+ QLV C  + SGC+G     + E+        + +E
Sbjct: 152 AFSAVGNIESQWAVADHRLXXLSEQQLVSCDDKDSGCNGGLMTQAFEWLLRNMNGTMLTE 211

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIH 883
             YPY ++ G+  +C      V       ++    SET M   L K GP+S+ +++    
Sbjct: 212 DSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDASSFM 271

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
            Y    +     +C+   L H VLLVGY +   +PYW+++NSWG    ++G+ ++  G N
Sbjct: 272 SYESGVL----TSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMGVN 327

Query: 944 AC 945
           AC
Sbjct: 328 AC 329



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 137/303 (45%), Gaps = 25/303 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
              G  +     +       K    L        VPDA DWR+K    P  DQ ACGSCW
Sbjct: 98  YLNGAAYFAAAKQHAGQHHRKARADL------SAVPDAVDWREKGAVTPVKDQGACGSCW 151

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLES 458
           AFS  G +E Q+A+   +L   S+ QLV C  + SGC G   + Q  E+        + +
Sbjct: 152 AFSAVGNIESQWAVADHRLXXLSEQQLVSCDDKDSGCNG-GLMTQAFEWLLRNMNGTMLT 210

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLI 517
           E  YPY +  G+  +C      V       ++    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDASSF 270

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
             Y    +     +C+   L H VLLVGY +  ++PYW+ +NSWG    ++G+ ++  G 
Sbjct: 271 MSYESGVL----TSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 578 NAC 580
           NAC
Sbjct: 327 NAC 329



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +E Q+A+   +L   S+ QLV C  + 
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIESQWAVADHRLXXLSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC+G     + E+        + +E  YPY ++ G+  +C      V       ++   
Sbjct: 186 SGCNGGLMTQAFEWLLRNMNGTMLTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +
Sbjct: 246 SSETVMAAWLAKSGPISIAVDASSFMSYESGVL----TSCAGDALNHGVLLVGYNRTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 34/50 (68%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY +  ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|157779038|gb|ABV71063.1| cathepsin L3 precursor [Schistosoma mansoni]
 gi|360044915|emb|CCD82463.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 370

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 169/355 (47%), Gaps = 34/355 (9%)

Query: 624 PSLT-DRITDQVVARVDTLAIEGSLTFDN-ENILETFKAFIVKRGRQYANDEEIKERFEY 681
           PSL+  R+ +Q V       + GS+  +  ++I+  +K F ++  R Y    E   RF  
Sbjct: 28  PSLSLGRLFEQQVKE----GVPGSVNVELLDDIIAAWKFFKIQFKRAYNGIHEETRRFFI 83

Query: 682 FKQDGHKKHE------------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 729
           F  +  K  E            + G +EF+D++  E+    G+K +        A R K 
Sbjct: 84  FSANFVKMMEHNHAFQEGKVTYKMGVNEFTDKTDYELKKLRGYKVTSG------AIRHKG 137

Query: 730 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 789
              +    +   +P   DWR++       +Q  CGSCWAFS  G +EGQ+  KT +LV  
Sbjct: 138 STFIRS--EHTKLPSKVDWRREGAVTDVKNQGQCGSCWAFSTTGAIEGQHYRKTNRLVNL 195

Query: 790 SKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-EKFKCAYDKSK 845
           S+ QLV+C+K    +GC G     + EY     G++SE  YPY + +G E  +C ++ S 
Sbjct: 196 SEQQLVDCSKSYGNNGCSGGLMNSAFEYVRDNEGIDSEISYPYVSGDGTENNRCLFNASN 255

Query: 846 V-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDL 902
           +    TG   +H      +   +   GP+SV +N+ L     Y        D   +   L
Sbjct: 256 ILAQVTGYVNIHEGDERALMDAVATKGPVSVAINAGLPSFSMYKSGIYSDTDCEGTLDAL 315

Query: 903 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
            H VL+VGYG+++   YWL++NSWG    ++G+ KI +G +N CG+   A Y  +
Sbjct: 316 DHGVLVVGYGEENGRSYWLIKNSWGEEWGEKGYIKISKGSHNMCGVASAASYPLV 370



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 170/356 (47%), Gaps = 35/356 (9%)

Query: 258 PSLT-DRITDQVVARVDTLAIEGSLTFDN-ENILETFKAFIVKRGRQYANDEEIKERFEY 315
           PSL+  R+ +Q V       + GS+  +  ++I+  +K F ++  R Y    E   RF  
Sbjct: 28  PSLSLGRLFEQQVKE----GVPGSVNVELLDDIIAAWKFFKIQFKRAYNGIHEETRRFFI 83

Query: 316 FKQDGHKKHE------------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 363
           F  +  K  E            + G +EF+D++  E+    G+K +        A R K 
Sbjct: 84  FSANFVKMMEHNHAFQEGKVTYKMGVNEFTDKTDYELKKLRGYKVTSG------AIRHKG 137

Query: 364 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 423
              +    +   +P   DWR++       +Q  CGSCWAFS  G +EGQ+  KT +LV  
Sbjct: 138 STFIRS--EHTKLPSKVDWRREGAVTDVKNQGQCGSCWAFSTTGAIEGQHYRKTNRLVNL 195

Query: 424 SKSQLVECAKQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNG-EKFKCAYDKS 479
           S+ QLV+C+K   G  GC G  +    EY     G++SE  YPY +G+G E  +C ++ S
Sbjct: 196 SEQQLVDCSKS-YGNNGCSGGLMNSAFEYVRDNEGIDSEISYPYVSGDGTENNRCLFNAS 254

Query: 480 KV-KLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF--YNGTPIRKNDETCSPYD 536
            +    TG   ++      +   +   GP+SV +N+ L  F  Y        D   +   
Sbjct: 255 NILAQVTGYVNIHEGDERALMDAVATKGPVSVAINAGLPSFSMYKSGIYSDTDCEGTLDA 314

Query: 537 LGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           L H VL+VGYG+++   YWL +NSWG    ++G+ KI +G +N CG+   A Y  +
Sbjct: 315 LDHGVLVVGYGEENGRSYWLIKNSWGEEWGEKGYIKISKGSHNMCGVASAASYPLV 370



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 8/223 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P   DWR++       +Q  CGSCWAFS  G +EGQ+  KT +LV  S+ QLV+C+K  
Sbjct: 148 LPSKVDWRREGAVTDVKNQGQCGSCWAFSTTGAIEGQHYRKTNRLVNLSEQQLVDCSKSY 207

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-EKFKCAYDKSKV-KLFTGKDFLH 125
             +GC G     + EY     G++SE  YPY + +G E  +C ++ S +    TG   +H
Sbjct: 208 GNNGCSGGLMNSAFEYVRDNEGIDSEISYPYVSGDGTENNRCLFNASNILAQVTGYVNIH 267

Query: 126 FNGSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
                 +   +   GP+SV +N+ L     Y        D   +   L H VL+VGYG++
Sbjct: 268 EGDERALMDAVATKGPVSVAINAGLPSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEE 327

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           +   YWL++NSWG    ++G+ KI +G +N CG+   A Y  +
Sbjct: 328 NGRSYWLIKNSWGEEWGEKGYIKISKGSHNMCGVASAASYPLV 370



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            L H VL+VGYG+++   YWL++NSWG    ++G+ KI +G +N CG+   A Y  +
Sbjct: 315  LDHGVLVVGYGEENGRSYWLIKNSWGEEWGEKGYIKISKGSHNMCGVASAASYPLV 370


>gi|394331735|gb|AFN27090.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 148/326 (45%), Gaps = 31/326 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWRKK    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NACGIEQIAGYATIDVVKNDETCSPY 968
           NAC    + GY     V   ++ +PY
Sbjct: 327 NAC---LLTGYPV--SVHVSQSPTPY 347



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWRKK    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWRKK    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWRKKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|74136185|ref|NP_001027984.1| cathepsin K precursor [Macaca mulatta]
 gi|47117667|sp|P61276.1|CATK_MACFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|47117668|sp|P61277.1|CATK_MACMU RecName: Full=Cathepsin K; Flags: Precursor
 gi|3236470|gb|AAC23694.1| cathepsin K [Macaca fascicularis]
 gi|4927694|gb|AAD33249.1| cathepsin K [Macaca mulatta]
 gi|355558400|gb|EHH15180.1| hypothetical protein EGK_01237 [Macaca mulatta]
 gi|355763132|gb|EHH62118.1| hypothetical protein EGM_20317 [Macaca fascicularis]
 gi|380809978|gb|AFE76864.1| cathepsin K preproprotein [Macaca mulatta]
 gi|383416065|gb|AFH31246.1| cathepsin K preproprotein [Macaca mulatta]
 gi|384945478|gb|AFI36344.1| cathepsin K preproprotein [Macaca mulatta]
          Length = 329

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 137/265 (51%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        + A   +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTNEEVVQKMTGLK--------VPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 245 VSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYILMARNKNNACGIANLASFPKM 329



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 137/266 (51%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        + A   +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTNEEVVQKMTGLK--------VPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYILMARNKNNACGIANLASFPKM 329



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q  
Sbjct: 229 EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|60654335|gb|AAX29858.1| cathepsin K [synthetic construct]
 gi|60654337|gb|AAX29859.1| cathepsin K [synthetic construct]
          Length = 330

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 155/328 (47%), Gaps = 28/328 (8%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 695
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 696 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
              +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKK 124

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 812 SIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYK 869
           + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + +
Sbjct: 185 AFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 241

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG  
Sbjct: 242 VGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGEN 301

Query: 930 GPDEGFFKIERG-NNACGIEQIAGYATI 956
             ++G+  + R  NNACGI  +A +  +
Sbjct: 302 WGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 329
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 330 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
              +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKK 124

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   + 
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMT 183

Query: 446 QPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILY 503
              +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + 
Sbjct: 184 NAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVA 240

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
           + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG 
Sbjct: 241 RVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGE 300

Query: 564 IGPDEGFFKIERG-NNACGIEQIAGYATI 591
              ++G+  + R  NNACGI  +A +  +
Sbjct: 301 NWGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 122/223 (54%), Gaps = 6/223 (2%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           E +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+
Sbjct: 110 EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVD 169

Query: 66  CAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDF 123
           C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   
Sbjct: 170 CVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYRE 226

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q
Sbjct: 227 IPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ 286

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
               +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 287 KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|393904668|gb|EFO15826.2| hypothetical protein LOAG_12683 [Loa loa]
          Length = 202

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 113/199 (56%), Gaps = 3/199 (1%)

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ 453
             ACGSCWAFS+ G +EG +AIK GKL+  S+ +L++C     GC G   L    E    
Sbjct: 7   SVACGSCWAFSVTGNIEGAWAIKKGKLISLSEQELIDCDVIDQGCKGGLPLNAYKEIIRM 66

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
            GLESEKDYPY +G+GE  KC   + ++ ++        +    +   + K GP+S+G+N
Sbjct: 67  GGLESEKDYPY-DGHGE--KCHLVRKEIAVYINDSIQLPDDEIKIAAWVAKKGPVSIGVN 123

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           +  + FY           C P  + H VL+VGYG++ + PYW+ +NSWG    + G++++
Sbjct: 124 AGPLQFYRHGISHPWKAFCLPSHINHGVLIVGYGQEANKPYWIIKNSWGTKWGENGYYRL 183

Query: 574 ERGNNACGIEQIAGYATID 592
            RG N CG++++A  A + 
Sbjct: 184 YRGKNVCGVKEMATTAIVQ 202



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 4/199 (2%)

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQ 818
             ACGSCWAFS+ G +EG +AIK GKL+  S+ +L++C     GC G        E    
Sbjct: 7   SVACGSCWAFSVTGNIEGAWAIKKGKLISLSEQELIDCDVIDQGCKGGLPLNAYKEIIRM 66

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
            GLESEKDYPY   +G   KC   + ++ ++        +    +   + K GP+S+ +N
Sbjct: 67  GGLESEKDYPY---DGHGEKCHLVRKEIAVYINDSIQLPDDEIKIAAWVAKKGPVSIGVN 123

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +  +  Y           C P  + H VL+VGYG++ N PYW+++NSWG    + G++++
Sbjct: 124 AGPLQFYRHGISHPWKAFCLPSHINHGVLIVGYGQEANKPYWIIKNSWGTKWGENGYYRL 183

Query: 939 ERGNNACGIEQIAGYATID 957
            RG N CG++++A  A + 
Sbjct: 184 YRGKNVCGVKEMATTAIVQ 202



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 4/196 (2%)

Query: 32  CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGL 90
           CGSCWAFS+ G +EG +AIK GKL+  S+ +L++C     GC G        E     GL
Sbjct: 10  CGSCWAFSVTGNIEGAWAIKKGKLISLSEQELIDCDVIDQGCKGGLPLNAYKEIIRMGGL 69

Query: 91  ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 150
           ESEKDYPY   +G   KC   + ++ ++        +    +   + K GP+S+ +N+  
Sbjct: 70  ESEKDYPY---DGHGEKCHLVRKEIAVYINDSIQLPDDEIKIAAWVAKKGPVSIGVNAGP 126

Query: 151 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 210
           +  Y           C P  + H VL+VGYG++ N PYW+++NSWG    + G++++ RG
Sbjct: 127 LQFYRHGISHPWKAFCLPSHINHGVLIVGYGQEANKPYWIIKNSWGTKWGENGYYRLYRG 186

Query: 211 NNACGIEQIAGYATID 226
            N CG++++A  A + 
Sbjct: 187 KNVCGVKEMATTAIVQ 202



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 42/61 (68%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + H VL+VGYG++ + PYW+++NSWG    + G++++ RG N CG++++A  A +
Sbjct: 142  CLPSHINHGVLIVGYGQEANKPYWIIKNSWGTKWGENGYYRLYRGKNVCGVKEMATTAIV 201

Query: 1025 D 1025
             
Sbjct: 202  Q 202


>gi|320164780|gb|EFW41679.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 150/318 (47%), Gaps = 32/318 (10%)

Query: 658 FKAFIVKRGRQYAND-EEIKER--FEYFKQ--DGHK----KHERYGTSEFSDRSPEEILC 708
           F+A+    G+ Y++  EEI  R  +E  K   D H          G + F+D + EE   
Sbjct: 30  FEAWKRTFGKSYSDAVEEINRRAVWEANKMLVDAHNGAGIHSYTLGMNIFADLTHEEF-- 87

Query: 709 KTGFKWSERTYERIVAD----REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
                  +R Y     D    R       +     G +PD+ DWR   +  P  DQ  CG
Sbjct: 88  -------KRFYLGTKVDLNRPRSNFSSTFIPTANVGALPDSVDWRTAGIVTPVKDQGQCG 140

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEY-THQAGL 821
           SCW+FS  G +EGQ+A KTG+LV  S+  LV+C+K     GC+G   + + +Y     G+
Sbjct: 141 SCWSFSTTGSVEGQHARKTGQLVSLSEQNLVDCSKAQGNQGCNGGLMDDAFQYIITNKGI 200

Query: 822 ESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNS 879
           ++E  YPY   +G  KF  A   + +  F  +D     GSE+ ++  +   GP+SV +++
Sbjct: 201 DTEASYPYTAKDGTCKFNAANVGATLSSF--QDITR--GSESDLQNAVATVGPVSVAIDA 256

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
                   T    N++ CS   L H VL  GYG  +  PYWLV+NSWG      G+  + 
Sbjct: 257 SKNSFQLYTSGVYNEKKCSSTSLDHGVLAAGYGTSNGTPYWLVKNSWGSSWGQAGYIWMS 316

Query: 940 R-GNNACGIEQIAGYATI 956
           R  NN CGI   A Y  +
Sbjct: 317 RNANNQCGIATSASYPIV 334



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 151/319 (47%), Gaps = 33/319 (10%)

Query: 292 FKAFIVKRGRQYAND-EEIKER--FEYFKQ--DGHK----KHERYGTSEFSDRSPEEILC 342
           F+A+    G+ Y++  EEI  R  +E  K   D H          G + F+D + EE   
Sbjct: 30  FEAWKRTFGKSYSDAVEEINRRAVWEANKMLVDAHNGAGIHSYTLGMNIFADLTHEEF-- 87

Query: 343 KTGFKWSERTYERIVAD----REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
                  +R Y     D    R       +     G +PD+ DWR   +  P  DQ  CG
Sbjct: 88  -------KRFYLGTKVDLNRPRSNFSSTFIPTANVGALPDSVDWRTAGIVTPVKDQGQCG 140

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEY-THQAG 455
           SCW+FS  G +EGQ+A KTG+LV  S+  LV+C+K   G  GC+G  ++   +Y     G
Sbjct: 141 SCWSFSTTGSVEGQHARKTGQLVSLSEQNLVDCSK-AQGNQGCNGGLMDDAFQYIITNKG 199

Query: 456 LESEKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLN 513
           +++E  YPY   +G  KF  A   + +  F  +D     GSE+ ++  +   GP+SV ++
Sbjct: 200 IDTEASYPYTAKDGTCKFNAANVGATLSSF--QDIT--RGSESDLQNAVATVGPVSVAID 255

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           +    F   T    N++ CS   L H VL  GYG  +  PYWL +NSWG      G+  +
Sbjct: 256 ASKNSFQLYTSGVYNEKKCSSTSLDHGVLAAGYGTSNGTPYWLVKNSWGSSWGQAGYIWM 315

Query: 574 ER-GNNACGIEQIAGYATI 591
            R  NN CGI   A Y  +
Sbjct: 316 SRNANNQCGIATSASYPIV 334



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 118/223 (52%), Gaps = 10/223 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +PD+ DWR   +  P  DQ  CGSCW+FS  G +EGQ+A KTG+LV  S+  LV+C+K
Sbjct: 116 GALPDSVDWRTAGIVTPVKDQGQCGSCWSFSTTGSVEGQHARKTGQLVSLSEQNLVDCSK 175

Query: 69  Q--CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFL 124
                GC+G   + + +Y     G+++E  YPY   +G  KF  A   + +  F  +D  
Sbjct: 176 AQGNQGCNGGLMDDAFQYIITNKGIDTEASYPYTAKDGTCKFNAANVGATLSSF--QDIT 233

Query: 125 HFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
              GSE+ ++  +   GP+SV +++        T    N++ CS   L H VL  GYG  
Sbjct: 234 R--GSESDLQNAVATVGPVSVAIDASKNSFQLYTSGVYNEKKCSSTSLDHGVLAAGYGTS 291

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           +  PYWLV+NSWG      G+  + R  NN CGI   A Y  +
Sbjct: 292 NGTPYWLVKNSWGSSWGQAGYIWMSRNANNQCGIATSASYPIV 334



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 1017
            V N++ CS   L H VL  GYG  +  PYWLV+NSWG      G+  + R  NN CGI  
Sbjct: 268  VYNEKKCSSTSLDHGVLAAGYGTSNGTPYWLVKNSWGSSWGQAGYIWMSRNANNQCGIAT 327

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 328  SASYPIV 334


>gi|45822205|emb|CAE47499.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 317

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 158/324 (48%), Gaps = 25/324 (7%)

Query: 647 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERY---------G 694
           +  +  ++ + +  F V   ++Y + +E + RF+ F Q+  K    + RY         G
Sbjct: 5   VAVNATSVHQQWAQFKVNHSKKYGHLKEEQVRFQVFSQNLQKIEQHNARYQNGEVSFYLG 64

Query: 695 TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
            ++F+D + EE       +   +  +R +  R   +  L        VP++ DWR+K   
Sbjct: 65  VNQFADMTSEEFKAMLDSQLIHKP-KRDITSRFVADPQLT-------VPESIDWREKGAV 116

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCDGCFFEPS 812
            P  DQ  CGSCWAFS AG LEGQ  +K GKL   S  QLV+C++  +  GC+G +   +
Sbjct: 117 NPVRDQEQCGSCWAFSAAGALEGQRFLKEGKLEVLSTQQLVDCSRDYKNEGCNGGWPHWA 176

Query: 813 IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGP 872
            +Y    GL  E  Y Y+  +G  + C      +K   G   ++    E +K+ +   GP
Sbjct: 177 YDYIKDNGLCLESKYKYQGYDG--YYCKECIPAIKKINGYSSIN-QTEEALKEAVGTAGP 233

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           ++V +N++         I ++        + HAVL VGYG ++   +WL++NSW     +
Sbjct: 234 IAVCVNANDDWQLYSGGILESQSCPGGESINHAVLAVGYGSENGKDFWLIKNSWNTYWGE 293

Query: 933 EGFFKIERGNNACGIEQIAGYATI 956
           EG+ +I RG N CGI ++A Y  +
Sbjct: 294 EGYLRIVRGKNQCGINEVADYPLL 317



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 116/217 (53%), Gaps = 5/217 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK-- 68
           VP++ DWR+K    P  DQ  CGSCWAFS AG LEGQ  +K GKL   S  QLV+C++  
Sbjct: 104 VPESIDWREKGAVNPVRDQEQCGSCWAFSAAGALEGQRFLKEGKLEVLSTQQLVDCSRDY 163

Query: 69  QCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
           +  GC+G +   + +Y    GL  E  Y Y+  +G  + C      +K   G   ++   
Sbjct: 164 KNEGCNGGWPHWAYDYIKDNGLCLESKYKYQGYDG--YYCKECIPAIKKINGYSSIN-QT 220

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            E +K+ +   GP++V +N++         I ++        + HAVL VGYG ++   +
Sbjct: 221 EEALKEAVGTAGPIAVCVNANDDWQLYSGGILESQSCPGGESINHAVLAVGYGSENGKDF 280

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           WL++NSW     +EG+ +I RG N CGI ++A Y  +
Sbjct: 281 WLIKNSWNTYWGEEGYLRIVRGKNQCGINEVADYPLL 317



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 156/326 (47%), Gaps = 28/326 (8%)

Query: 281 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERY---------G 328
           +  +  ++ + +  F V   ++Y + +E + RF+ F Q+  K    + RY         G
Sbjct: 5   VAVNATSVHQQWAQFKVNHSKKYGHLKEEQVRFQVFSQNLQKIEQHNARYQNGEVSFYLG 64

Query: 329 TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
            ++F+D + EE       +   +  +R +  R   +  L        VP++ DWR+K   
Sbjct: 65  VNQFADMTSEEFKAMLDSQLIHKP-KRDITSRFVADPQLT-------VPESIDWREKGAV 116

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQ 446
            P  DQ  CGSCWAFS AG LEGQ  +K GKL   S  QLV+C++      GC+G     
Sbjct: 117 NPVRDQEQCGSCWAFSAAGALEGQRFLKEGKLEVLSTQQLVDCSRDYKN-EGCNGGWPHW 175

Query: 447 PIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYG 506
             +Y    GL  E  Y Y+  +G  + C      +K   G   +     E +K+ +   G
Sbjct: 176 AYDYIKDNGLCLESKYKYQGYDG--YYCKECIPAIKKINGYSSIN-QTEEALKEAVGTAG 232

Query: 507 PLSVGLNSH-LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           P++V +N++     Y+G  I ++        + HAVL VGYG ++   +WL +NSW    
Sbjct: 233 PIAVCVNANDDWQLYSGG-ILESQSCPGGESINHAVLAVGYGSENGKDFWLIKNSWNTYW 291

Query: 566 PDEGFFKIERGNNACGIEQIAGYATI 591
            +EG+ +I RG N CGI ++A Y  +
Sbjct: 292 GEEGYLRIVRGKNQCGINEVADYPLL 317



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            + HAVL VGYG ++   +WL++NSW     +EG+ +I RG N CGI ++A Y  +
Sbjct: 263  INHAVLAVGYGSENGKDFWLIKNSWNTYWGEEGYLRIVRGKNQCGINEVADYPLL 317


>gi|8547325|gb|AAF76330.1|AF271385_1 cathepsin L [Fasciola hepatica]
          Length = 326

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/216 (37%), Positives = 115/216 (53%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C++  
Sbjct: 108 VPDRIDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKNQRTSISFSEQQLVDCSRDF 167

Query: 802 S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
              GC+G   E + EY  + GLE+E  YPY+   G+   C Y++   V   TG   +H  
Sbjct: 168 GNYGCNGGLMENAYEYLKRFGLETESSYPYRAVEGQ---CRYNEQLGVAKVTGYYTVHSG 224

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               ++ ++   GP +V L+  SD +   +G       +TCSP  L H VL VGYG QD 
Sbjct: 225 DEVELQNLVGAEGPAAVALDVESDFMMYRSGI---YQSQTCSPDRLNHGVLAVGYGIQDG 281

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
             YW+V+NSWG    ++G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGTWWGEDGYIRMVRKRGNMCGIASLA 317



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 120/226 (53%), Gaps = 15/226 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C++  
Sbjct: 108 VPDRIDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKNQRTSISFSEQQLVDCSRDF 167

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
              GC+G   E + EY  + GLE+E  YPY+   G+   C Y++   V   TG   +H  
Sbjct: 168 GNYGCNGGLMENAYEYLKRFGLETESSYPYRAVEGQ---CRYNEQLGVAKVTGYYTVHSG 224

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               ++ ++   GP +V L+  SD +   +G       +TCSP  L H VL VGYG QD 
Sbjct: 225 DEVELQNLVGAEGPAAVALDVESDFMMYRSGI---YQSQTCSPDRLNHGVLAVGYGIQDG 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATIDVVIQ 230
             YW+V+NSWG    ++G+ ++ R   N CG   IA  A++ +V Q
Sbjct: 282 TDYWIVKNSWGTWWGEDGYIRMVRKRGNMCG---IASLASVPMVAQ 324



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 120/227 (52%), Gaps = 16/227 (7%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C++  
Sbjct: 108 VPDRIDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKNQRTSISFSEQQLVDCSRDF 167

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC+G  +E   EY  + GLE+E  YPYR   G+   C Y++   V   TG   ++ 
Sbjct: 168 -GNYGCNGGLMENAYEYLKRFGLETESSYPYRAVEGQ---CRYNEQLGVAKVTGYYTVHS 223

Query: 493 NGSETMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                ++ ++   GP +V L+  S  + + +G       +TCSP  L H VL VGYG QD
Sbjct: 224 GDEVELQNLVGAEGPAAVALDVESDFMMYRSGI---YQSQTCSPDRLNHGVLAVGYGIQD 280

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATIDVVIQ 596
              YW+ +NSWG    ++G+ ++ R   N CG   IA  A++ +V Q
Sbjct: 281 GTDYWIVKNSWGTWWGEDGYIRMVRKRGNMCG---IASLASVPMVAQ 324



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            +   +TCSP  L H VL VGYG QD   YW+V+NSWG    ++G+ ++ R   N CGI  
Sbjct: 256  IYQSQTCSPDRLNHGVLAVGYGIQDGTDYWIVKNSWGTWWGEDGYIRMVRKRGNMCGIAS 315

Query: 1018 IA 1019
            +A
Sbjct: 316  LA 317


>gi|461905|sp|Q05094.1|CYSP2_LEIPI RecName: Full=Cysteine proteinase 2; AltName: Full=Amastigote
           cysteine proteinase A-2; Flags: Precursor
 gi|159298|gb|AAA29229.1| cysteine proteinase [Leishmania pifanoi]
          Length = 444

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 136/301 (45%), Gaps = 21/301 (6%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 94

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 95  -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C     GCDG     + ++  Q     L +E  
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDS 213

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+    ++ +    D     GS  + M   L K GP+++ L++     
Sbjct: 214 YPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 273

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 274 YKSGVLT----ACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 329

Query: 945 C 945
           C
Sbjct: 330 C 330



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 137/302 (45%), Gaps = 22/302 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 94

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 95  -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C     GC G   L Q  ++  Q     L +E 
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLML-QAFDWLLQNTNGHLHTED 212

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+    ++ +    D     GS  + M   L K GP+++ L++    
Sbjct: 213 SYPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 272

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 273 SYKSGVLT----ACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 328

Query: 579 AC 580
           AC
Sbjct: 329 AC 330



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 9/209 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMN 185

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GCDG     + ++  Q     L +E  YPY + NG   +C+    ++ +    D     
Sbjct: 186 DGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSEELVVGAQIDGHVLI 245

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C    L H VLLVGY     
Sbjct: 246 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLT----ACIGKQLNHGVLLVGYDMTGE 301

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 VPYWVIKNSWGGDWGEQGYVRVVMGVNAC 330


>gi|218199600|gb|EEC82027.1| hypothetical protein OsI_25996 [Oryza sativa Indica Group]
          Length = 709

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 151/330 (45%), Gaps = 45/330 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 709
           F AF+ + GR+Y+  EE   R   F                 R+G + FSD + EE   +
Sbjct: 48  FAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQALDPTARHGVTPFSDLTREEFEAR 107

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                ++   + +   R  +       E++   +P ++DWR +        Q ACGSCWA
Sbjct: 108 LTGLATDVGDDDVRRRRLPMPSAAPATEEEVSGLPSSFDWRDRGAVTGVKMQGACGSCWA 167

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA 819
           FS  G +EG   + TG L++ S+ QLV+C   C         SGC G     +  Y   +
Sbjct: 168 FSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCDAEKKTECDSGCGGGLMTNAYAYLMSS 227

Query: 820 -GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--------NGSETMKKILYKY 870
            GL  +  YPY  A G    C +D ++V +      +          +G   M+  L ++
Sbjct: 228 GGLMEQSAYPYTGAQG---ACRFDANRVAVRVANFTVVAPAAGPGGNDGDAQMRAALVRH 284

Query: 871 GPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYW 920
           GPL+V LN+  +  Y G    P+      C    + H VLLVGYG++        + PYW
Sbjct: 285 GPLAVGLNAAYMQTYVGGVSCPL-----VCPRAWVNHGVLLVGYGERGFAALRLGHRPYW 339

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
           +++NSWG    ++G++++ RG N CG++ +
Sbjct: 340 IIKNSWGKAWGEQGYYRLCRGRNVCGVDTM 369



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 147/330 (44%), Gaps = 44/330 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 343
           F AF+ + GR+Y+  EE   R   F                 R+G + FSD + EE   +
Sbjct: 48  FAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQALDPTARHGVTPFSDLTREEFEAR 107

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                ++   + +   R  +       E++   +P ++DWR +        Q ACGSCWA
Sbjct: 108 LTGLATDVGDDDVRRRRLPMPSAAPATEEEVSGLPSSFDWRDRGAVTGVKMQGACGSCWA 167

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCGGCDGLEQPIEYTHQ 453
           FS  G +EG   + TG L++ S+ QLV+C   C         SGCGG             
Sbjct: 168 FSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCDAEKKTECDSGCGGGLMTNAYAYLMSS 227

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF--------NGSETMKKILYKY 505
            GL  +  YPY    G    C +D ++V +      +          +G   M+  L ++
Sbjct: 228 GGLMEQSAYPYTGAQG---ACRFDANRVAVRVANFTVVAPAAGPGGNDGDAQMRAALVRH 284

Query: 506 GPLSVGLNSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYW 555
           GPL+VGLN+  +  Y G    P+      C    + H VLLVGYG++          PYW
Sbjct: 285 GPLAVGLNAAYMQTYVGGVSCPL-----VCPRAWVNHGVLLVGYGERGFAALRLGHRPYW 339

Query: 556 LARNSWGPIGPDEGFFKIERGNNACGIEQI 585
           + +NSWG    ++G++++ RG N CG++ +
Sbjct: 340 IIKNSWGKAWGEQGYYRLCRGRNVCGVDTM 369



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 116/237 (48%), Gaps = 36/237 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P ++DWR +        Q  CGSCWAFS  G +EG   + TG L++ S+ QLV+C   C
Sbjct: 141 LPSSFDWRDRGAVTGVKMQGACGSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTC 200

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC G     +  Y   + GL  +  YPY  A G    C +D ++V +   
Sbjct: 201 DAEKKTECDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQG---ACRFDANRVAVRVA 257

Query: 121 KDFLHF--------NGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPY 169
              +          +G   M+  L ++GPL+V LN+  +  Y G    P+      C   
Sbjct: 258 NFTVVAPAAGPGGNDGDAQMRAALVRHGPLAVGLNAAYMQTYVGGVSCPL-----VCPRA 312

Query: 170 DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
            + H VLLVGYG++        + PYW+++NSWG    ++G++++ RG N CG++ +
Sbjct: 313 WVNHGVLLVGYGERGFAALRLGHRPYWIIKNSWGKAWGEQGYYRLCRGRNVCGVDTM 369



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQ-------DDIPYWLV 990
            +  G  A G+        +  V     C    + H VLLVGYG++          PYW++
Sbjct: 282  VRHGPLAVGLNAAYMQTYVGGVSCPLVCPRAWVNHGVLLVGYGERGFAALRLGHRPYWII 341

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            +NSWG    ++G++++ RG N CG++ +
Sbjct: 342  KNSWGKAWGEQGYYRLCRGRNVCGVDTM 369


>gi|1834307|dbj|BAA09820.1| cysteine proteinase [Spirometra erinaceieuropaei]
 gi|1834309|dbj|BAA09821.1| cysteine proteinase [Spirometra erinaceieuropaei]
          Length = 336

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 168/325 (51%), Gaps = 41/325 (12%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK---------QDGHKKHERYGT--SEFSDRSP 337
           E +KA+ +   ++Y +++EE+  +  +F          Q  +++ E Y    ++FSD +P
Sbjct: 30  ELWKAWKLAFKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAVRLNDFSDLTP 89

Query: 338 ----EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 393
               E  LC  G          ++    + E + + ++++  +PD+ +WR++       +
Sbjct: 90  GEFAERYLCLRGI---------VLTKLRRKEAVSVPLKEN--LPDSVNWRERGAVTSVKN 138

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYT 451
           Q  CGSCW+FS  G +EG   IKTG L   S+ QL++C+    G  GC+G  + Q  +Y 
Sbjct: 139 QGQCGSCWSFSANGAIEGAIQIKTGALRSLSEQQLMDCSWD-YGNQGCNGGLMPQAFQYA 197

Query: 452 HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSV 510
            + G+E+E DY Y   +G    C Y +  V    TG   L       +++ +   GP+SV
Sbjct: 198 QRYGVEAEVDYRYTERDG---VCRYRQDLVVANVTGYAELPEGDEGGLQRAVATIGPISV 254

Query: 511 GLNSH---LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPD 567
           G+++     + + +G  + K   TCSPY + H VL+VGYG ++   YWL +NSWG    +
Sbjct: 255 GIDAADPGFMSYSHGVFVSK---TCSPYAIDHGVLVVGYGAENGDAYWLVKNSWGSSWGE 311

Query: 568 EGFFKIERG-NNACGIEQIAGYATI 591
           +G+ K+ R  NN CGI  +A Y T+
Sbjct: 312 DGYLKMARNRNNMCGIASMASYPTV 336



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 165/324 (50%), Gaps = 40/324 (12%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK---------QDGHKKHERYGT--SEFSDRSP 703
           E +KA+ +   ++Y +++EE+  +  +F          Q  +++ E Y    ++FSD +P
Sbjct: 30  ELWKAWKLAFKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAVRLNDFSDLTP 89

Query: 704 ----EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 759
               E  LC  G          ++    + E + + ++++  +PD+ +WR++       +
Sbjct: 90  GEFAERYLCLRGI---------VLTKLRRKEAVSVPLKEN--LPDSVNWRERGAVTSVKN 138

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTH 817
           Q  CGSCW+FS  G +EG   IKTG L   S+ QL++C+      GC+G     + +Y  
Sbjct: 139 QGQCGSCWSFSANGAIEGAIQIKTGALRSLSEQQLMDCSWDYGNQGCNGGLMPQAFQYAQ 198

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVL 876
           + G+E+E DY Y   +G    C Y +  V    TG   L       +++ +   GP+SV 
Sbjct: 199 RYGVEAEVDYRYTERDG---VCRYRQDLVVANVTGYAELPEGDEGGLQRAVATIGPISVG 255

Query: 877 LNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           +++     +   +G  + K   TCSPY + H VL+VGYG ++   YWLV+NSWG    ++
Sbjct: 256 IDAADPGFMSYSHGVFVSK---TCSPYAIDHGVLVVGYGAENGDAYWLVKNSWGSSWGED 312

Query: 934 GFFKIERG-NNACGIEQIAGYATI 956
           G+ K+ R  NN CGI  +A Y T+
Sbjct: 313 GYLKMARNRNNMCGIASMASYPTV 336



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 120/222 (54%), Gaps = 13/222 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD+ +WR++       +Q  CGSCW+FS  G +EG   IKTG L   S+ QL++C+   
Sbjct: 121 LPDSVNWRERGAVTSVKNQGQCGSCWSFSANGAIEGAIQIKTGALRSLSEQQLMDCSWDY 180

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFN 127
              GC+G     + +Y  + G+E+E DY Y   +G    C Y +  V    TG   L   
Sbjct: 181 GNQGCNGGLMPQAFQYAQRYGVEAEVDYRYTERDG---VCRYRQDLVVANVTGYAELPEG 237

Query: 128 GSETMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
               +++ +   GP+SV +++     +   +G  + K   TCSPY + H VL+VGYG ++
Sbjct: 238 DEGGLQRAVATIGPISVGIDAADPGFMSYSHGVFVSK---TCSPYAIDHGVLVVGYGAEN 294

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
              YWLV+NSWG    ++G+ K+ R  NN CGI  +A Y T+
Sbjct: 295 GDAYWLVKNSWGSSWGEDGYLKMARNRNNMCGIASMASYPTV 336



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
             +TCSPY + H VL+VGYG ++   YWLV+NSWG    ++G+ K+ R  NN CGI  +A 
Sbjct: 273  SKTCSPYAIDHGVLVVGYGAENGDAYWLVKNSWGSSWGEDGYLKMARNRNNMCGIASMAS 332

Query: 1021 YATI 1024
            Y T+
Sbjct: 333  YPTV 336


>gi|4503151|ref|NP_000387.1| cathepsin K preproprotein [Homo sapiens]
 gi|1168793|sp|P43235.1|CATK_HUMAN RecName: Full=Cathepsin K; AltName: Full=Cathepsin O; AltName:
           Full=Cathepsin O2; AltName: Full=Cathepsin X; Flags:
           Precursor
 gi|562757|emb|CAA57649.1| Cathepsin O [Homo sapiens]
 gi|606923|gb|AAA65233.1| cathepsin O [Homo sapiens]
 gi|1195556|gb|AAB35521.1| cathepsin O2 [Homo sapiens]
 gi|16359188|gb|AAH16058.1| Cathepsin K [Homo sapiens]
 gi|49456311|emb|CAG46476.1| CTSK [Homo sapiens]
 gi|60823594|gb|AAX36649.1| cathepsin K [synthetic construct]
 gi|119573901|gb|EAW53516.1| cathepsin K (pycnodysostosis), isoform CRA_b [Homo sapiens]
 gi|307685681|dbj|BAJ20771.1| cathepsin K [synthetic construct]
 gi|312150424|gb|ADQ31724.1| cathepsin K [synthetic construct]
          Length = 329

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 155/328 (47%), Gaps = 28/328 (8%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 695
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 696 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
              +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKK 124

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 812 SIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYK 869
           + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + +
Sbjct: 185 AFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 241

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG  
Sbjct: 242 VGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGEN 301

Query: 930 GPDEGFFKIERG-NNACGIEQIAGYATI 956
             ++G+  + R  NNACGI  +A +  +
Sbjct: 302 WGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 329
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 330 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
              +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKK 124

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   + 
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMT 183

Query: 446 QPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILY 503
              +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + 
Sbjct: 184 NAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVA 240

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
           + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG 
Sbjct: 241 RVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGE 300

Query: 564 IGPDEGFFKIERG-NNACGIEQIAGYATI 591
              ++G+  + R  NNACGI  +A +  +
Sbjct: 301 NWGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 122/223 (54%), Gaps = 6/223 (2%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           E +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+
Sbjct: 110 EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVD 169

Query: 66  CAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDF 123
           C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   
Sbjct: 170 CVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYRE 226

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q
Sbjct: 227 IPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ 286

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
               +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 287 KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|312095086|ref|XP_003148243.1| hypothetical protein LOAG_12683 [Loa loa]
          Length = 195

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 113/197 (57%), Gaps = 3/197 (1%)

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQA 454
            ACGSCWAFS+ G +EG +AIK GKL+  S+ +L++C     GC G   L    E     
Sbjct: 1   VACGSCWAFSVTGNIEGAWAIKKGKLISLSEQELIDCDVIDQGCKGGLPLNAYKEIIRMG 60

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GLESEKDYPY +G+GE  KC   + ++ ++        +    +   + K GP+S+G+N+
Sbjct: 61  GLESEKDYPY-DGHGE--KCHLVRKEIAVYINDSIQLPDDEIKIAAWVAKKGPVSIGVNA 117

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
             + FY           C P  + H VL+VGYG++ + PYW+ +NSWG    + G++++ 
Sbjct: 118 GPLQFYRHGISHPWKAFCLPSHINHGVLIVGYGQEANKPYWIIKNSWGTKWGENGYYRLY 177

Query: 575 RGNNACGIEQIAGYATI 591
           RG N CG++++A  A +
Sbjct: 178 RGKNVCGVKEMATTAIV 194



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 4/197 (2%)

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQA 819
            ACGSCWAFS+ G +EG +AIK GKL+  S+ +L++C     GC G        E     
Sbjct: 1   VACGSCWAFSVTGNIEGAWAIKKGKLISLSEQELIDCDVIDQGCKGGLPLNAYKEIIRMG 60

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GLESEKDYPY   +G   KC   + ++ ++        +    +   + K GP+S+ +N+
Sbjct: 61  GLESEKDYPY---DGHGEKCHLVRKEIAVYINDSIQLPDDEIKIAAWVAKKGPVSIGVNA 117

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
             +  Y           C P  + H VL+VGYG++ N PYW+++NSWG    + G++++ 
Sbjct: 118 GPLQFYRHGISHPWKAFCLPSHINHGVLIVGYGQEANKPYWIIKNSWGTKWGENGYYRLY 177

Query: 940 RGNNACGIEQIAGYATI 956
           RG N CG++++A  A +
Sbjct: 178 RGKNVCGVKEMATTAIV 194



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 4/195 (2%)

Query: 32  CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGL 90
           CGSCWAFS+ G +EG +AIK GKL+  S+ +L++C     GC G        E     GL
Sbjct: 3   CGSCWAFSVTGNIEGAWAIKKGKLISLSEQELIDCDVIDQGCKGGLPLNAYKEIIRMGGL 62

Query: 91  ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 150
           ESEKDYPY   +G   KC   + ++ ++        +    +   + K GP+S+ +N+  
Sbjct: 63  ESEKDYPY---DGHGEKCHLVRKEIAVYINDSIQLPDDEIKIAAWVAKKGPVSIGVNAGP 119

Query: 151 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 210
           +  Y           C P  + H VL+VGYG++ N PYW+++NSWG    + G++++ RG
Sbjct: 120 LQFYRHGISHPWKAFCLPSHINHGVLIVGYGQEANKPYWIIKNSWGTKWGENGYYRLYRG 179

Query: 211 NNACGIEQIAGYATI 225
            N CG++++A  A +
Sbjct: 180 KNVCGVKEMATTAIV 194



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 42/60 (70%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C P  + H VL+VGYG++ + PYW+++NSWG    + G++++ RG N CG++++A  A +
Sbjct: 135  CLPSHINHGVLIVGYGQEANKPYWIIKNSWGTKWGENGYYRLYRGKNVCGVKEMATTAIV 194


>gi|378943046|gb|AFC76264.1| cathepsin L-like protease [Leishmania major]
 gi|378943056|gb|AFC76269.1| cathepsin L-like protease [Leishmania major]
 gi|394331745|gb|AFN27095.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 147/326 (45%), Gaps = 31/326 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NACGIEQIAGYATIDVVKNDETCSPY 968
           NAC    + GY    +V    T  PY
Sbjct: 327 NAC---LLTGYPVSVLVSQSPT--PY 347



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 150/321 (46%), Gaps = 32/321 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNACGIEQIAGYATIDVVIQ 596
           G NAC    + GY    +V Q
Sbjct: 325 GVNAC---LLTGYPVSVLVSQ 342



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 112/224 (50%), Gaps = 11/224 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQ 230
           PYW+++NSWG    ++G+ ++  G NAC    + GY    +V Q
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC---LLTGYPVSVLVSQ 342


>gi|402856109|ref|XP_003892642.1| PREDICTED: cathepsin K [Papio anubis]
          Length = 348

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 137/265 (51%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        + A   +    L   + +G  PD+ D+RKK   
Sbjct: 95  NHLGDMTNEEVVQKMTGLK--------VPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYV 146

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 147 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 206

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + GP
Sbjct: 207 YVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 263

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 264 VSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 323

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 324 KGYILMARNKNNACGIANLASFPKM 348



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 137/266 (51%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        + A   +    L   + +G  PD+ D+RKK   
Sbjct: 95  NHLGDMTNEEVVQKMTGLK--------VPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYV 146

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 147 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 205

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + G
Sbjct: 206 QYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 262

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 263 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 322

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 323 NKGYILMARNKNNACGIANLASFPKM 348



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 131 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 190

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 191 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 247

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q  
Sbjct: 248 EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG 307

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 308 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 348



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 285  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 344

Query: 1021 YATI 1024
            +  +
Sbjct: 345  FPKM 348


>gi|33333710|gb|AAQ11973.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 33/314 (10%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 334
           ++ E  + F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEGQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +  G  GC G  + Q  ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             G+++E+ YPY    G +  C   KS   +   K +++    + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 513 NSHLIHFYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +  + FY+   +   DE C       DL   VL+VGYG ++ + YW+ +NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNPGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 569 GFFKIERGNNACGI 582
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 34/314 (10%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 700
           ++ E  + F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEGQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFEPSIEYTH 817
           A CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +    +GC G     + ++  
Sbjct: 131 ANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ 190

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLL 877
             G+++E+ YPY+   G +  C   KS   +   K ++     + M + +   GP++V +
Sbjct: 191 DEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDEQEMARTVAAKGPVAVAI 245

Query: 878 NSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +  +  Y+   +   DE C       DL   VL+VGYG ++ + YW+V+NSWG    ++
Sbjct: 246 EASQLSFYDKGIV---DERCRCSNKREDLNPGVLVVGYGSENGVDYWIVKNSWGADWGEK 302

Query: 934 GFFKIERGNNACGI 947
           G+F++++   ACGI
Sbjct: 303 GYFRLKKDVKACGI 316



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 116/211 (54%), Gaps = 15/211 (7%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 69
           DA DWR++    P  DQA+CGSCWAFS  G +EGQ+  K G LV  S  +LV+CA +   
Sbjct: 114 DAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYG 173

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K ++     
Sbjct: 174 NNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTYVFPLDE 228

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVGYGKQDN 185
           + M + +   GP++V + +  +  Y+   +   DE C       DL   VL+VGYG ++ 
Sbjct: 229 QEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNPGVLVVGYGSENG 285

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 286 VDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 34/47 (72%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            DL   VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 270  DLNPGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|344295866|ref|XP_003419631.1| PREDICTED: cathepsin W-like [Loxodonta africana]
          Length = 376

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 160/346 (46%), Gaps = 43/346 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           E F  F ++  R Y+N  E   R + F ++  +  +         ++G + FSD + EE 
Sbjct: 40  EVFALFQLQYNRSYSNPAEHARRLDIFARNLAQAQQLQEEDLGTAKFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G        ++       V +     E   PVP   DWRK  NV  P  +Q  C  
Sbjct: 100 RQVYG-------QQKAPGRAPNVSRKAGPKEWGRPVPATCDWRKMANVIKPVRNQKNCKC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA ++AG +E  + IK  + VE S  +L++C +   GC G F ++  I   + +GL SE
Sbjct: 153 CWAMAVAGNIEALWGIKYSQSVEVSVQELLDCGRCGDGCGGGFVWDAFITVLNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIH 883
           KDYP++  N +  KC   K     +  +DF+     E  +   L   GP++V +N  L+ 
Sbjct: 213 KDYPFQ-GNVKAHKCQAKKHTNVAWI-QDFIMLQDDEQIIAGYLATQGPITVTINMKLLQ 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDNIPYWLVR 923
            Y    IR     C P+ + H+VLLVG+GK                      +IPYW+++
Sbjct: 271 HYQKGVIRAKSNDCDPHRVNHSVLLVGFGKGKSVARMPAETPQGGAPAHPSRSIPYWILK 330

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATID--VVKNDETCSP 967
           NSWG    +EG+F++ RG+N CGI +    A +D    K   +C P
Sbjct: 331 NSWGSNWGEEGYFRLHRGSNTCGITKYPLTARVDKQTKKQPVSCPP 376



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 154/334 (46%), Gaps = 40/334 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           E F  F ++  R Y+N  E   R + F ++  +  +         ++G + FSD + EE 
Sbjct: 40  EVFALFQLQYNRSYSNPAEHARRLDIFARNLAQAQQLQEEDLGTAKFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G        ++       V +     E   PVP   DWRK  NV  P  +Q  C  
Sbjct: 100 RQVYG-------QQKAPGRAPNVSRKAGPKEWGRPVPATCDWRKMANVIKPVRNQKNCKC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA ++AG +E  + IK  + VE S  +L++C +   GCGG    +  I   + +GL SE
Sbjct: 153 CWAMAVAGNIEALWGIKYSQSVEVSVQELLDCGRCGDGCGGGFVWDAFITVLNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIH 518
           KDYP++ GN +  KC   K     +  +DF+     E  +   L   GP++V +N  L+ 
Sbjct: 213 KDYPFQ-GNVKAHKCQAKKHTNVAWI-QDFIMLQDDEQIIAGYLATQGPITVTINMKLLQ 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDDIPYWLAR 558
            Y    IR     C P+ + H+VLLVG+GK                       IPYW+ +
Sbjct: 271 HYQKGVIRAKSNDCDPHRVNHSVLLVGFGKGKSVARMPAETPQGGAPAHPSRSIPYWILK 330

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           NSWG    +EG+F++ RG+N CGI +    A +D
Sbjct: 331 NSWGSNWGEEGYFRLHRGSNTCGITKYPLTARVD 364



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 124/240 (51%), Gaps = 25/240 (10%)

Query: 10  PVPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           PVP   DWRK  NV  P  +Q +C  CWA ++AG +E  + IK  + VE S  +L++C +
Sbjct: 127 PVPATCDWRKMANVIKPVRNQKNCKCCWAMAVAGNIEALWGIKYSQSVEVSVQELLDCGR 186

Query: 69  QCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              GC G F ++  I   + +GL SEKDYP++  N +  KC   K     +  +DF+   
Sbjct: 187 CGDGCGGGFVWDAFITVLNNSGLASEKDYPFQ-GNVKAHKCQAKKHTNVAWI-QDFIMLQ 244

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK---- 182
             E  +   L   GP++V +N  L+  Y    IR     C P+ + H+VLLVG+GK    
Sbjct: 245 DDEQIIAGYLATQGPITVTINMKLLQHYQKGVIRAKSNDCDPHRVNHSVLLVGFGKGKSV 304

Query: 183 ----------------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
                             +IPYW+++NSWG    +EG+F++ RG+N CGI +    A +D
Sbjct: 305 ARMPAETPQGGAPAHPSRSIPYWILKNSWGSNWGEEGYFRLHRGSNTCGITKYPLTARVD 364



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 22/91 (24%)

Query: 955  TIDVVKNDETCSPYDLGHAVLLVGYGK--------------------QDDIPYWLVRNSW 994
             I    ND  C P+ + H+VLLVG+GK                       IPYW+++NSW
Sbjct: 276  VIRAKSND--CDPHRVNHSVLLVGFGKGKSVARMPAETPQGGAPAHPSRSIPYWILKNSW 333

Query: 995  GPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            G    +EG+F++ RG+N CGI +    A +D
Sbjct: 334  GSNWGEEGYFRLHRGSNTCGITKYPLTARVD 364


>gi|432114312|gb|ELK36240.1| Aryl hydrocarbon receptor nuclear translocator [Myotis davidii]
          Length = 897

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 136/264 (51%), Gaps = 15/264 (5%)

Query: 697 EFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 755
           +++ ++ EE++ K TG         R+     +    L   + +G  PD+ D+RKK    
Sbjct: 645 QYNSKTSEEVVQKMTGL--------RVPPSHSRSNDTLYIPDWEGKAPDSIDYRKKGYVT 696

Query: 756 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY 815
           P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +Y
Sbjct: 697 PVKNQGQCGSCWAFSSVGALEGQLMKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQY 756

Query: 816 THQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPL 873
             +  G++SE  YPY    G+   C Y+ + K     G   +     + +KK + + GP+
Sbjct: 757 VQRNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYKEIPEGNEKALKKAVARVGPI 813

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           SV +++ L      +     DE C+  +L HAVL VGYG Q    +W+++NSWG    ++
Sbjct: 814 SVAIDASLSSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNK 873

Query: 934 GFFKIERG-NNACGIEQIAGYATI 956
           G+  + R  NNACGI  +A +  +
Sbjct: 874 GYILMARNKNNACGIANLASFPKM 897



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 136/265 (51%), Gaps = 16/265 (6%)

Query: 331 EFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 389
           +++ ++ EE++ K TG         R+     +    L   + +G  PD+ D+RKK    
Sbjct: 645 QYNSKTSEEVVQKMTGL--------RVPPSHSRSNDTLYIPDWEGKAPDSIDYRKKGYVT 696

Query: 390 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIE 449
           P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    +
Sbjct: 697 PVKNQGQCGSCWAFSSVGALEGQLMKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAFQ 755

Query: 450 YTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYGP 507
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +KK + + GP
Sbjct: 756 YVQRNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYKEIPEGNEKALKKAVARVGP 812

Query: 508 LSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPD 567
           +SV +++ L  F   +     DE C+  +L HAVL VGYG Q    +W+ +NSWG    +
Sbjct: 813 ISVAIDASLSSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGN 872

Query: 568 EGFFKIERG-NNACGIEQIAGYATI 591
           +G+  + R  NNACGI  +A +  +
Sbjct: 873 KGYILMARNKNNACGIANLASFPKM 897



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 680 EGKAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLMKKTGKLLNLSPQNLVDCV 739

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 740 SENDGCGGGYMTNAFQYVQRNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYKEIP 796

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +KK + + GP+SV +++ L      +     DE C+  +L HAVL VGYG Q  
Sbjct: 797 EGNEKALKKAVARVGPISVAIDASLSSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKG 856

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 857 KKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 897



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 834  DENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 893

Query: 1021 YATI 1024
            +  +
Sbjct: 894  FPKM 897


>gi|52546912|gb|AAU81589.1| cysteine proteinase [Petunia x hybrida]
          Length = 257

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 127/243 (52%), Gaps = 35/243 (14%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +PD +DWR+K       +Q +CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C
Sbjct: 24  LPDDFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHEC 83

Query: 802 ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 851
                    +GC G     + EYT +A GL+ EKDYPY   +G   KC +DKSK+     
Sbjct: 84  DAEQQNECDAGCGGGLMTTAFEYTLKAGGLQREKDYPYTGRDG---KCHFDKSKIAASVA 140

Query: 852 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKNDETCSPYDLGHA 905
              +     + +   L K+GPL+V +N+  +  Y G    P+   ++ D         H 
Sbjct: 141 NFSVVGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD---------HG 191

Query: 906 VLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
           VLLVGYG       +    PYW+++NSWG    ++G++KI RG N CG++ +    T   
Sbjct: 192 VLLVGYGSAGFAPIRLKEKPYWIIKNSWGESWGEQGYYKICRGRNICGVDAMVSTVTAAH 251

Query: 959 VKN 961
             N
Sbjct: 252 TTN 254



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 125/237 (52%), Gaps = 35/237 (14%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR+K       +Q  CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C
Sbjct: 24  LPDDFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHEC 83

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    +GC G     + EYT +A GL+ EKDYPY   +G   KC +DKSK+     
Sbjct: 84  DAEQQNECDAGCGGGLMTTAFEYTLKAGGLQREKDYPYTGRDG---KCHFDKSKIAASVA 140

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKNDETCSPYDLGHA 174
              +     + +   L K+GPL+V +N+  +  Y G    P+   ++ D         H 
Sbjct: 141 NFSVVGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD---------HG 191

Query: 175 VLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 224
           VLLVGYG       +    PYW+++NSWG    ++G++KI RG N CG++ +    T
Sbjct: 192 VLLVGYGSAGFAPIRLKEKPYWIIKNSWGESWGEQGYYKICRGRNICGVDAMVSTVT 248



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 128/238 (53%), Gaps = 36/238 (15%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +PD +DWR+K       +Q +CGSCW+FS  G +EG + + TG+LV  S+ QLV+C  +C
Sbjct: 24  LPDDFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHEC 83

Query: 436 ---------SGCGGCDGLEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFT 485
                    +GCGG   +    EYT +A GL+ EKDYPY   +G   KC +DKSK+    
Sbjct: 84  DAEQQNECDAGCGG-GLMTTAFEYTLKAGGLQREKDYPYTGRDG---KCHFDKSKIAASV 139

Query: 486 GKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG---TPI---RKNDETCSPYDLGH 539
               +     + +   L K+GPL+VG+N+  +  Y G    P+   ++ D         H
Sbjct: 140 ANFSVVGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD---------H 190

Query: 540 AVLLVGYG-------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 590
            VLLVGYG       +  + PYW+ +NSWG    ++G++KI RG N CG++ +    T
Sbjct: 191 GVLLVGYGSAGFAPIRLKEKPYWIIKNSWGESWGEQGYYKICRGRNICGVDAMVSTVT 248



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 7/59 (11%)

Query: 972  HAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            H VLLVGYG       +  + PYW+++NSWG    ++G++KI RG N CG++ +    T
Sbjct: 190  HGVLLVGYGSAGFAPIRLKEKPYWIIKNSWGESWGEQGYYKICRGRNICGVDAMVSTVT 248


>gi|354472953|ref|XP_003498701.1| PREDICTED: cathepsin K [Cricetulus griseus]
          Length = 329

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 120/223 (53%), Gaps = 6/223 (2%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           E +G  PDA D+RKK    P  +Q +CGSCWAFS AG LEGQ   KTGKL+  S   LV+
Sbjct: 110 EWEGRAPDAIDYRKKGYVTPVKNQGECGSCWAFSSAGALEGQLKKKTGKLLNLSPQNLVD 169

Query: 66  CAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDF 123
           C  +  GC G +   +  Y     G++SE  YPY    G+   C Y+  +K     G   
Sbjct: 170 CVSENYGCGGGYMTTAFRYVQTNGGIDSEDAYPYV---GQDQSCMYNPTAKAAKCRGYRE 226

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +     + +K+ + + GP+SV +++ L      +     DE C   ++ HAVL+VGYG Q
Sbjct: 227 IPVGSEKALKRAVARVGPISVSIDASLTSFQFYSRGVYYDENCDGDNVNHAVLVVGYGAQ 286

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
               +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 287 KGNKHWIIKNSWGESWGNKGYVLLARNRNNACGITNLASFPKM 329



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 132/265 (49%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +          L   E +G  PDA D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------LPPSHSHSNDTLYIPEWEGRAPDAIDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS AG LEGQ   KTGKL+  S   LV+C  +  GC G +   +  
Sbjct: 128 TPVKNQGECGSCWAFSSAGALEGQLKKKTGKLLNLSPQNLVDCVSENYGCGGGYMTTAFR 187

Query: 815 YTH-QAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y     G++SE  YPY    G+   C Y+  +K     G   +     + +K+ + + GP
Sbjct: 188 YVQTNGGIDSEDAYPYV---GQDQSCMYNPTAKAAKCRGYREIPVGSEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE C   ++ HAVL+VGYG Q    +W+++NSWG    +
Sbjct: 245 ISVSIDASLTSFQFYSRGVYYDENCDGDNVNHAVLVVGYGAQKGNKHWIIKNSWGESWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYVLLARNRNNACGITNLASFPKM 329



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 132/266 (49%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +          L   E +G  PDA D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------LPPSHSHSNDTLYIPEWEGRAPDAIDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS AG LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGECGSCWAFSSAGALEGQLKKKTGKLLNLSPQNLVDCVSENYGCGG-GYMTTAF 186

Query: 449 EYTH-QAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLYFNGSETMKKILYKYG 506
            Y     G++SE  YPY    G+   C Y+  +K     G   +     + +K+ + + G
Sbjct: 187 RYVQTNGGIDSEDAYPYV---GQDQSCMYNPTAKAAKCRGYREIPVGSEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE C   ++ HAVL+VGYG Q    +W+ +NSWG    
Sbjct: 244 PISVSIDASLTSFQFYSRGVYYDENCDGDNVNHAVLVVGYGAQKGNKHWIIKNSWGESWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYVLLARNRNNACGITNLASFPKM 329



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C   ++ HAVL+VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DENCDGDNVNHAVLVVGYGAQKGNKHWIIKNSWGESWGNKGYVLLARNRNNACGITNLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|343472970|emb|CCD15012.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 382

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 149/310 (48%), Gaps = 26/310 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPPAIDWRKKGAVTPVKDQGQC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
            S WAFS  G +EGQ+ +   +L   S+  LV C     GC G F +P+ ++   +++  
Sbjct: 148 DSSWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTNDFGCGGGFSDPAFKWIVSSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLN 878
           + +E+ YPY +  G    C  DKS KV     +D +     E  + + L K GP+++ ++
Sbjct: 208 VFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDRVDLPRDENAIAEWLAKNGPVAIAVD 265

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +     Y G  +     +C   ++  AVLLVGY      PYW+++NSW     ++G+ +I
Sbjct: 266 ATSFQSYTGGVL----TSCISKEMNSAVLLVGYDDTSKPPYWIIKNSWSKGWGEKGYIRI 321

Query: 939 ERGNNACGIE 948
           E+G N C ++
Sbjct: 322 EKGTNQCLVK 331



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 147/312 (47%), Gaps = 29/312 (9%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPPAIDWRKKGAVTPVKDQGQC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQP----IEYTHQ 453
            S WAFS  G +EGQ+ +   +L   S+  LV C     GCGG  G   P    I  +++
Sbjct: 148 DSSWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTNDFGCGG--GFSDPAFKWIVSSNK 205

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVG 511
             + +E+ YPY +G G    C  DKS KV     +D +     E  + + L K GP+++ 
Sbjct: 206 GNVFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDRVDLPRDENAIAEWLAKNGPVAIA 263

Query: 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           +++     Y G  +     +C   ++  AVLLVGY      PYW+ +NSW     ++G+ 
Sbjct: 264 VDATSFQSYTGGVL----TSCISKEMNSAVLLVGYDDTSKPPYWIIKNSWSKGWGEKGYI 319

Query: 572 KIERGNNACGIE 583
           +IE+G N C ++
Sbjct: 320 RIEKGTNQCLVK 331



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 11/214 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWRKK    P  DQ  C S WAFS  G +EGQ+ +   +L   S+  LV C  
Sbjct: 124 GKAPPAIDWRKKGAVTPVKDQGQCDSSWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFL 124
              GC G F +P+ ++   +++  + +E+ YPY +  G    C  DKS KV     +D +
Sbjct: 184 NDFGCGGGFSDPAFKWIVSSNKGNVFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDRV 241

Query: 125 HFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
                E  + + L K GP+++ +++     Y G  +     +C   ++  AVLLVGY   
Sbjct: 242 DLPRDENAIAEWLAKNGPVAIAVDATSFQSYTGGVL----TSCISKEMNSAVLLVGYDDT 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 217
              PYW+++NSW     ++G+ +IE+G N C ++
Sbjct: 298 SKPPYWIIKNSWSKGWGEKGYIRIEKGTNQCLVK 331


>gi|394331816|gb|AFN27127.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 139/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+   +L   S+ QLV C  + +GC G     + E+        + +
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDNGCAGGLMLQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY ++ G   +C+     V       +L    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSTGYVPECSNSSQLVPGARIDGYLTIESSETVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY +   +PYW+++NSWG    + G+ ++  G 
Sbjct: 271 MSYQSGVL----TSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 139/304 (45%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+   +L   S+ QLV C  + +GC G   L Q  E+        + 
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDNGCAGGLML-QAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY +  G   +C+     V       +L    SET M   L K GP+S+ +++  
Sbjct: 210 TEDSYPYVSSTGYVPECSNSSQLVPGARIDGYLTIESSETVMAAWLAKNGPISIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY +  ++PYW+ +NSWG    + G+ ++  G
Sbjct: 270 FMSYQSGVL----TSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWRKK    P  DQ  CGSCWAFS  G +E Q+A+   +L   S+ QLV C  + 
Sbjct: 126 VPDAVDWRKKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +E  YPY ++ G   +C+     V       +L   
Sbjct: 186 NGCAGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSTGYVPECSNSSQLVPGARIDGYLTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +
Sbjct: 246 SSETVMAAWLAKNGPISIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNRTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    + G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGENWGENGYVRVTMGVNAC 329



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY +  ++PYW+++NSWG    + G+ ++  G NAC
Sbjct: 280  SCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMGVNAC 329


>gi|3023456|sp|Q26534.1|CATL_SCHMA RecName: Full=Cathepsin L; AltName: Full=SMCL1; Flags: Precursor
 gi|555663|gb|AAC46485.1| preprocathepsin L [Schistosoma mansoni]
 gi|1094710|prf||2106314A cathepsin L
          Length = 319

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 148/318 (46%), Gaps = 27/318 (8%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH---------ERYGTSEFSDRSP 337
           N+ E +  F +K  +QY   E+ + RF  FK +  K             YG + +SD + 
Sbjct: 15  NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTT 73

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 74  DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 126

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG---CDGLEQPIEYTHQA 454
           GSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC G    +  E  I+     
Sbjct: 127 GSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGLPSNAYESIIK---MG 183

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL  E +YPY   + +  KC      V ++             +   LY    +SVG+N+
Sbjct: 184 GLMLEDNYPY---DAKNEKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNA 240

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIPYWLARNSWGPIGPDEGFFKI 573
            L+ FY           CS Y L HAVLLVGYG  + + P+W+ +NSWG    + G+F++
Sbjct: 241 LLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRM 300

Query: 574 ERGNNACGIEQIAGYATI 591
            RG+ +CGI  +A  A I
Sbjct: 301 YRGDGSCGINTVATSAMI 318



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 146/317 (46%), Gaps = 26/317 (8%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH---------ERYGTSEFSDRSP 703
           N+ E +  F +K  +QY   E+ + RF  FK +  K             YG + +SD + 
Sbjct: 15  NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTT 73

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 74  DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 126

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +E Q+  KTGKL+  S+ QLV+C     GC+G    PS  Y       G
Sbjct: 127 GSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGL--PSNAYESIIKMGG 184

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           L  E +YPY   N    KC      V ++             +   LY    +SV +N+ 
Sbjct: 185 LMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNAL 241

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           L+  Y           CS Y L HAVLLVGYG  + N P+W+V+NSWG    + G+F++ 
Sbjct: 242 LLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMY 301

Query: 940 RGNNACGIEQIAGYATI 956
           RG+ +CGI  +A  A I
Sbjct: 302 RGDGSCGINTVATSAMI 318



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 110/219 (50%), Gaps = 9/219 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+K       +Q  CGSCWAFS  G +E Q+  KTGKL+  S+ QLV+C    
Sbjct: 105 IPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLD 164

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC+G    PS  Y       GL  E +YPY   N    KC      V ++         
Sbjct: 165 DGCNGGL--PSNAYESIIKMGGLMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLTQ 219

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNI 186
               +   LY    +SV +N+ L+  Y           CS Y L HAVLLVGYG  + N 
Sbjct: 220 DETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNE 279

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           P+W+V+NSWG    + G+F++ RG+ +CGI  +A  A I
Sbjct: 280 PFWIVKNSWGVEWGENGYFRMYRGDGSCGINTVATSAMI 318


>gi|341876229|gb|EGT32164.1| hypothetical protein CAEBREN_11106 [Caenorhabditis brenneri]
          Length = 389

 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 171/361 (47%), Gaps = 44/361 (12%)

Query: 604 AIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 663
           AI+ I+A F +  +   LCL  L       V  R++   +E    +        F  FI+
Sbjct: 46  AIIAIRAWFYVV-LFVMLCLTVLF------VHKRIENSNMEQEAKY-----FRMFNDFIL 93

Query: 664 KRGRQYANDEEIKERFEYFKQD------GHKKH--ERYGTSEFSDRSPEEILCKTGFKWS 715
           K  R+Y    E+  R+  F ++        KKH       +E++D             W+
Sbjct: 94  KYNRRYEQPGELSRRYLIFVKNVKEFEAEEKKHLGVDLDVNEYTD-------------WT 140

Query: 716 ERTYERIVADREKVEKMLMEVEKDGPV-------PDAWDWRKKNVTGPAGDQAACGSCWA 768
           +   +R+V +++ V   L  V  +G         P + DWR +    P  +Q  CGSCWA
Sbjct: 141 DDELKRMVIEKKNVITDLEAVRFEGSYLESGVKRPASIDWRDQGKLTPIKNQGQCGSCWA 200

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYP 828
           F+    +E Q+AIK G+LV  S+ ++V+C  + +GC G +   ++ +  + GLESEK+YP
Sbjct: 201 FATVAAVEAQHAIKKGQLVSLSEQEMVDCDGRNNGCSGGYRPYAMRFVKENGLESEKEYP 260

Query: 829 YKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNG 887
           Y     +  +C   ++  ++F     +     E +   +   GP++  +N    ++ Y  
Sbjct: 261 YSALKHD--QCFLKQNDTRVFIDDFRMLSTNEEDIANWVGTKGPVTFGMNVVKAMYSYRS 318

Query: 888 TPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
                + E C+   +G HA+ +VGYG + +  +W+V+NSWG      G+F++ RG N+CG
Sbjct: 319 GIFNPSSEDCAEKSMGAHALTIVGYGGEGSSAFWIVKNSWGTSWGSSGYFRLARGVNSCG 378

Query: 947 I 947
           +
Sbjct: 379 L 379



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 168/362 (46%), Gaps = 45/362 (12%)

Query: 238 AIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 297
           AI+ I+A F +  +   LCL  L       V  R++   +E    +        F  FI+
Sbjct: 46  AIIAIRAWFYVV-LFVMLCLTVLF------VHKRIENSNMEQEAKY-----FRMFNDFIL 93

Query: 298 KRGRQYANDEEIKERFEYFKQD------GHKKH--ERYGTSEFSDRSPEEILCKTGFKWS 349
           K  R+Y    E+  R+  F ++        KKH       +E++D             W+
Sbjct: 94  KYNRRYEQPGELSRRYLIFVKNVKEFEAEEKKHLGVDLDVNEYTD-------------WT 140

Query: 350 ERTYERIVADREKVEKMLMEVEKDGPV-------PDAWDWRKKNVTGPAGDQAACGSCWA 402
           +   +R+V +++ V   L  V  +G         P + DWR +    P  +Q  CGSCWA
Sbjct: 141 DDELKRMVIEKKNVITDLEAVRFEGSYLESGVKRPASIDWRDQGKLTPIKNQGQCGSCWA 200

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           F+    +E Q+AIK G+LV  S+ ++V+C  + +GC G       + +  + GLESEK+Y
Sbjct: 201 FATVAAVEAQHAIKKGQLVSLSEQEMVDCDGRNNGCSG-GYRPYAMRFVKENGLESEKEY 259

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN-SHLIHFYN 521
           PY     +  +C   ++  ++F     +     E +   +   GP++ G+N    ++ Y 
Sbjct: 260 PYSALKHD--QCFLKQNDTRVFIDDFRMLSTNEEDIANWVGTKGPVTFGMNVVKAMYSYR 317

Query: 522 GTPIRKNDETCSPYDLG-HAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
                 + E C+   +G HA+ +VGYG +    +W+ +NSWG      G+F++ RG N+C
Sbjct: 318 SGIFNPSSEDCAEKSMGAHALTIVGYGGEGSSAFWIVKNSWGTSWGSSGYFRLARGVNSC 377

Query: 581 GI 582
           G+
Sbjct: 378 GL 379



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 113/207 (54%), Gaps = 4/207 (1%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P + DWR +    P  +Q  CGSCWAF+    +E Q+AIK G+LV  S+ ++V+C  + +
Sbjct: 175 PASIDWRDQGKLTPIKNQGQCGSCWAFATVAAVEAQHAIKKGQLVSLSEQEMVDCDGRNN 234

Query: 72  GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           GC G +   ++ +  + GLESEK+YPY     +  +C   ++  ++F     +     E 
Sbjct: 235 GCSGGYRPYAMRFVKENGLESEKEYPYSALKHD--QCFLKQNDTRVFIDDFRMLSTNEED 292

Query: 132 MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYW 189
           +   +   GP++  +N    ++ Y       + E C+   +G HA+ +VGYG + +  +W
Sbjct: 293 IANWVGTKGPVTFGMNVVKAMYSYRSGIFNPSSEDCAEKSMGAHALTIVGYGGEGSSAFW 352

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGI 216
           +V+NSWG      G+F++ RG N+CG+
Sbjct: 353 IVKNSWGTSWGSSGYFRLARGVNSCGL 379


>gi|408009|gb|AAA18215.1| cysteine protease precursor [Trypanosoma congolense]
          Length = 444

 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 150/320 (46%), Gaps = 29/320 (9%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAG 820
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC+G   + + ++   +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTNDFGCEGGLMDDAFKWIVSSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI---LYKYGPLSVLL 877
           + +E+ YPY +  G    C  DKS  K+   K   H +  E    I   L K GP+++ +
Sbjct: 208 VFTEQSYPYASGGGNVPTC--DKSG-KVVGAKIRDHVDLPEDENAIAEWLAKNGPVAIAV 264

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           ++     Y G  +     +C    L H VLLVGY      PYW+++NSW     +EG+  
Sbjct: 265 DATSFQSYTGGVL----TSCISEHLDHGVLLVGYDDTSKPPYWIIKNSWSKGWGEEGYSA 320

Query: 938 IERGNNACGIEQIAGYATID 957
           + R +N C ++ +   A + 
Sbjct: 321 LRR-HNQCLMKNLPSSAVVS 339



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 149/319 (46%), Gaps = 26/319 (8%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAG 455
           GSCWAFS  G +EGQ+ +   +L   S+  LV C     GC G   D   + I  +++  
Sbjct: 148 GSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDTNDFGCEGGLMDDAFKWIVSSNKGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN 513
           + +E+ YPY +G G    C  DKS KV     +D +     E  + + L K GP+++ ++
Sbjct: 208 VFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDHVDLPEDENAIAEWLAKNGPVAIAVD 265

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           +     Y G  +     +C    L H VLLVGY      PYW+ +NSW     +EG+  +
Sbjct: 266 ATSFQSYTGGVL----TSCISEHLDHGVLLVGYDDTSKPPYWIIKNSWSKGWGEEGYSAL 321

Query: 574 ERGNNACGIEQIAGYATID 592
            R +N C ++ +   A + 
Sbjct: 322 RR-HNQCLMKNLPSSAVVS 339



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 111/224 (49%), Gaps = 14/224 (6%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P+A DWRKK    P  DQ  CGSCWAFS  G +EGQ+ +   +L   S+  LV C  
Sbjct: 124 GKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC+G   + + ++   +++  + +E+ YPY +  G    C  DKS  K+   K   H
Sbjct: 184 NDFGCEGGLMDDAFKWIVSSNKGNVFTEQSYPYASGGGNVPTC--DKSG-KVVGAKIRDH 240

Query: 126 FNGSETMKKI---LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            +  E    I   L K GP+++ +++     Y G  +     +C    L H VLLVGY  
Sbjct: 241 VDLPEDENAIAEWLAKNGPVAIAVDATSFQSYTGGVL----TSCISEHLDHGVLLVGYDD 296

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
               PYW+++NSW     +EG+  + R +N C ++ +   A + 
Sbjct: 297 TSKPPYWIIKNSWSKGWGEEGYSALRR-HNQCLMKNLPSSAVVS 339


>gi|398010921|ref|XP_003858657.1| cathepsin L-like protease, partial [Leishmania donovani]
 gi|322496866|emb|CBZ31937.1| cathepsin L-like protease, partial [Leishmania donovani]
          Length = 345

 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 145/307 (47%), Gaps = 26/307 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT--HQAGLE-S 823
           WAFS  G +E Q+A     LV  S+ QLV C  + +GC+G     + E+   H  G+  +
Sbjct: 151 WAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C      V       ++    +ET M   L + GP+++ +++   
Sbjct: 211 EKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY K   +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVAMGR 326

Query: 943 NACGIEQ 949
           NAC + +
Sbjct: 327 NACLLSE 333



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 145/308 (47%), Gaps = 27/308 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT--HQAGLE- 457
           WAFS  G +E Q+A     LV  S+ QLV C  + +GC G   L Q  E+   H  G+  
Sbjct: 151 WAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLML-QAFEWLLRHMYGIVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +EK YPY +GNG+  +C      V       ++    +ET M   L + GP+++ +++  
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY K   +PYW+ +NSWG    ++G+ ++  G
Sbjct: 270 FMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVAMG 325

Query: 577 NNACGIEQ 584
            NAC + +
Sbjct: 326 RNACLLSE 333



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 8/212 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A     LV  S+ QLV C  + 
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEYT--HQAGLE-SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC+G     + E+   H  G+  +EK YPY + NG+  +C      V       ++   
Sbjct: 186 NGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            +ET M   L + GP+++ +++     Y    +     +C+   L H VLLVGY K   +
Sbjct: 246 SNETVMAAWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           PYW+++NSWG    ++G+ ++  G NAC + +
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVAMGRNACLLSE 333



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 35/54 (64%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 1017
            +C+   L H VLLVGY K   +PYW+++NSWG    ++G+ ++  G NAC + +
Sbjct: 280  SCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVAMGRNACLLSE 333


>gi|402770511|gb|AFQ98390.1| cathepsin L [Rhipicephalus microplus]
 gi|402770513|gb|AFQ98391.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 121/224 (54%), Gaps = 10/224 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 68  KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V   T   ++
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGA-TDTGYV 228

Query: 125 HFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
               GSE  +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           +    YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 121/224 (54%), Gaps = 10/224 (4%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 799 KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V   T   ++
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGA-TDTGYV 228

Query: 856 HFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 913
               GSE  +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
           +    YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 117/224 (52%), Gaps = 9/224 (4%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 433 KQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF 489
            Q  G  GC+G  +E   +Y     G+++EK YPY   +GE   C + K  V        
Sbjct: 173 -QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYV 228

Query: 490 LYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
               GSE  +KK +   GP+SV +++    F   +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           +    YWL +NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 1017
            V ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266  VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 326  QASYPLV 332


>gi|7381610|gb|AAF61565.1|AF227957_1 cathepsin L-like proteinase precursor [Rhipicephalus microplus]
          Length = 332

 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 121/224 (54%), Gaps = 10/224 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 68  KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V   T   ++
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGA-TDTGYV 228

Query: 125 HFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
               GSE  +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           +    YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 121/224 (54%), Gaps = 10/224 (4%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 799 KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V   T   ++
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGA-TDTGYV 228

Query: 856 HFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 913
               GSE  +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
           +    YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 117/224 (52%), Gaps = 9/224 (4%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 433 KQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF 489
            Q  G  GC+G  +E   +Y     G+++EK YPY   +GE   C + K  V        
Sbjct: 173 -QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYV 228

Query: 490 LYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
               GSE  +KK +   GP+SV +++    F   +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           +    YWL +NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 1017
            V ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266  VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 326  QASYPLV 332


>gi|402770515|gb|AFQ98392.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 121/224 (54%), Gaps = 10/224 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 68  KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V   T   ++
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGA-TDTGYV 228

Query: 125 HFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
               GSE  +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           +    YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 121/224 (54%), Gaps = 10/224 (4%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 799 KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
           +    +GC+G   E + +Y     G+++EK YPY+  +GE   C + K  V   T   ++
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGA-TDTGYV 228

Query: 856 HFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 913
               GSE  +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
           +    YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 117/224 (52%), Gaps = 9/224 (4%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCS 172

Query: 433 KQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF 489
            Q  G  GC+G  +E   +Y     G+++EK YPY   +GE   C + K  V        
Sbjct: 173 -QSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYV 228

Query: 490 LYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
               GSE  +KK +   GP+SV +++    F   +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           +    YWL +NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 1017
            V ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266  VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 326  QASYPLV 332


>gi|10798511|emb|CAC12806.1| cathepsin L1 [Fasciola hepatica]
          Length = 311

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 115/221 (52%), Gaps = 12/221 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 93  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNEKTSISFSEQQLVDCSGPW 152

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + EY  + GLE+E  YPY+   G+   C Y++   V   TG   +H  
Sbjct: 153 GNNGCSGGLMENAYEYLKRFGLETESSYPYRAVEGQ---CRYNEQLGVAKVTGYYTVHSG 209

Query: 128 GSETMKKILYKYGP--LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++   GP  ++V   SD +   +G       +TC P+ L HAVL VGYG QD 
Sbjct: 210 SEVELKNLVGSEGPAAIAVEAESDFMMYRSGI---YQSQTCLPFALNHAVLAVGYGTQDG 266

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YW+V+NSWG    + G+ ++ R   N CGI  +A    +
Sbjct: 267 TDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLASLPMV 307



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 93  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNEKTSISFSEQQLVDCSGPW 152

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + EY  + GLE+E  YPY+   G+   C Y++   V   TG   +H  
Sbjct: 153 GNNGCSGGLMENAYEYLKRFGLETESSYPYRAVEGQ---CRYNEQLGVAKVTGYYTVHSG 209

Query: 859 GSETMKKILYKYGP--LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++   GP  ++V   SD +   +G       +TC P+ L HAVL VGYG QD 
Sbjct: 210 SEVELKNLVGSEGPAAIAVEAESDFMMYRSGI---YQSQTCLPFALNHAVLAVGYGTQDG 266

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
             YW+V+NSWG    + G+ ++ R   N CGI  +A    +
Sbjct: 267 TDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLASLPMV 307



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 116/221 (52%), Gaps = 11/221 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 93  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNEKTSISFSEQQLVDCSGPW 152

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC G  +E   EY  + GLE+E  YPYR   G+   C Y++   V   TG  +   
Sbjct: 153 -GNNGCSGGLMENAYEYLKRFGLETESSYPYRAVEGQ---CRYNEQLGVAKVTGY-YTVH 207

Query: 493 NGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
           +GSE  +K ++   GP ++ + +        + I ++ +TC P+ L HAVL VGYG QD 
Sbjct: 208 SGSEVELKNLVGSEGPAAIAVEAESDFMMYRSGIYQS-QTCLPFALNHAVLAVGYGTQDG 266

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
             YW+ +NSWG    + G+ ++ R   N CGI  +A    +
Sbjct: 267 TDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLASLPMV 307



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            +   +TC P+ L HAVL VGYG QD   YW+V+NSWG    + G+ ++ R   N CGI  
Sbjct: 241  IYQSQTCLPFALNHAVLAVGYGTQDGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIAS 300

Query: 1018 IAGYATI 1024
            +A    +
Sbjct: 301  LASLPMV 307


>gi|116488416|gb|AAB41670.2| secreted cathepsin L 1 [Fasciola hepatica]
          Length = 326

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 115/221 (52%), Gaps = 12/221 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C++  
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPW 167

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG   +H  
Sbjct: 168 GNNGCGGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGFYTVHSG 224

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++   GP +V ++  SD +   +G       +TCSP  + HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGTQGG 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YW+V+NSWG    + G+ ++ R   N CGI  +A    +
Sbjct: 282 TDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLPMV 322



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C++  
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPW 167

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG   +H  
Sbjct: 168 GNNGCGGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGFYTVHSG 224

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++   GP +V ++  SD +   +G       +TCSP  + HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGTQGG 281

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
             YW+V+NSWG    + G+ ++ R   N CGI  +A    +
Sbjct: 282 TDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLPMV 322



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 117/226 (51%), Gaps = 21/226 (9%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C++  
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPW 167

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDK----SKVKLFTGKDF 489
            G  GC G  +E   +Y  Q GLE+E  YPY    G+   C Y+K    +KV  F    +
Sbjct: 168 -GNNGCGGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGF----Y 219

Query: 490 LYFNGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGY 546
              +GSE  +K ++   GP +V ++  S  + + +G       +TCSP  + HAVL VGY
Sbjct: 220 TVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGY 276

Query: 547 GKQDDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           G Q    YW+ +NSWG    + G+ ++ R   N CGI  +A    +
Sbjct: 277 GTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLPMV 322



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 17/107 (15%)

Query: 934  GFFKIERGN-----NACGIEQIAGYATIDV----------VKNDETCSPYDLGHAVLLVG 978
            GF+ +  G+     N  G E  A  A +DV          +   +TCSP  + HAVL VG
Sbjct: 217  GFYTVHSGSEVELKNLVGAEGPAAVA-VDVESDFMMYRSGIYQSQTCSPLRVNHAVLAVG 275

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
            YG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A    +
Sbjct: 276  YGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLPMV 322


>gi|836934|gb|AAA95998.1| cathepsin X [Homo sapiens]
          Length = 329

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 245 VSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYILMARNKNNACGIANLASFPKM 329



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 136/266 (51%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYILMARNKNNACGIANLASFPKM 329



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 122/223 (54%), Gaps = 6/223 (2%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           E +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+
Sbjct: 110 EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVD 169

Query: 66  CAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDF 123
           C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   
Sbjct: 170 CVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYRE 226

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q
Sbjct: 227 IPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ 286

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
               +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 287 KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|339246873|ref|XP_003375070.1| viral cathepsin [Trichinella spiralis]
 gi|316971622|gb|EFV55373.1| viral cathepsin [Trichinella spiralis]
          Length = 496

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 144/314 (45%), Gaps = 26/314 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 342
           FK F+    + Y +++E+ +R++ FK         Q   +    YG + F+D +PEE   
Sbjct: 196 FKEFLKTFKKWYLSEKELLKRYDIFKVNMKTVEMLQKNEQGTAVYGVTFFADLTPEEF-- 253

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                   + Y      R+++ +    + K G + D WDWR+ N      +Q  CGSCWA
Sbjct: 254 -------RKFYLSPQWKRDQLPQRKASIPK-GKIEDRWDWREHNAVTEVKNQGMCGSCWA 305

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           F+    +EG +A+K G+LV  S+ +LV+C     GC G        E     GL +E +Y
Sbjct: 306 FATIANVEGVWAVKKGELVSLSEQELVDCDTLDQGCSGGYPSNAYKEIIRLGGLTTETNY 365

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNG 522
            Y   +G +  C +     K++             +   + + GP++VG+N+  + FY  
Sbjct: 366 SY---DGNQGTCRFKTQNAKVYINDSVSLPEDETEIAAYIRENGPVAVGINAFAMMFYRH 422

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDI----PYWLARNSWGPIGPDEGFFKIERGNN 578
                    CSP  L H V +VGY  +       PYW+ +NSWG    + G++ + RG  
Sbjct: 423 GIAHPWRFLCSPDALDHGVAIVGYDVEKQSKKPKPYWIIKNSWGTHWGEGGYYMLYRGAG 482

Query: 579 ACGIEQIAGYATID 592
            CG+ ++   A ID
Sbjct: 483 VCGVNKMVTSAIID 496



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 150/317 (47%), Gaps = 33/317 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 708
           FK F+    + Y +++E+ +R++ FK         Q   +    YG + F+D +PEE   
Sbjct: 196 FKEFLKTFKKWYLSEKELLKRYDIFKVNMKTVEMLQKNEQGTAVYGVTFFADLTPEEF-- 253

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                   + Y      R+++ +    + K G + D WDWR+ N      +Q  CGSCWA
Sbjct: 254 -------RKFYLSPQWKRDQLPQRKASIPK-GKIEDRWDWREHNAVTEVKNQGMCGSCWA 305

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEK 825
           F+    +EG +A+K G+LV  S+ +LV+C     GC G +  PS  Y       GL +E 
Sbjct: 306 FATIANVEGVWAVKKGELVSLSEQELVDCDTLDQGCSGGY--PSNAYKEIIRLGGLTTET 363

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHD 884
           +Y Y   +G +  C +     K++   D +     ET +   + + GP++V +N+  +  
Sbjct: 364 NYSY---DGNQGTCRFKTQNAKVYIN-DSVSLPEDETEIAAYIRENGPVAVGINAFAMMF 419

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI----PYWLVRNSWGPIGPDEGFFKIER 940
           Y           CSP  L H V +VGY  +       PYW+++NSWG    + G++ + R
Sbjct: 420 YRHGIAHPWRFLCSPDALDHGVAIVGYDVEKQSKKPKPYWIIKNSWGTHWGEGGYYMLYR 479

Query: 941 GNNACGIEQIAGYATID 957
           G   CG+ ++   A ID
Sbjct: 480 GAGVCGVNKMVTSAIID 496



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 14/226 (6%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G + D WDWR+ N      +Q  CGSCWAF+    +EG +A+K G+LV  S+ +LV+C  
Sbjct: 277 GKIEDRWDWREHNAVTEVKNQGMCGSCWAFATIANVEGVWAVKKGELVSLSEQELVDCDT 336

Query: 69  QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G +  PS  Y       GL +E +Y Y   +G +  C +     K++   D + 
Sbjct: 337 LDQGCSGGY--PSNAYKEIIRLGGLTTETNYSY---DGNQGTCRFKTQNAKVYIN-DSVS 390

Query: 126 FNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
               ET +   + + GP++V +N+  +  Y           CSP  L H V +VGY  + 
Sbjct: 391 LPEDETEIAAYIRENGPVAVGINAFAMMFYRHGIAHPWRFLCSPDALDHGVAIVGYDVEK 450

Query: 185 NI----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
                 PYW+++NSWG    + G++ + RG   CG+ ++   A ID
Sbjct: 451 QSKKPKPYWIIKNSWGTHWGEGGYYMLYRGAGVCGVNKMVTSAIID 496



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 4/65 (6%)

Query: 965  CSPYDLGHAVLLVGYGKQDDI----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 1020
            CSP  L H V +VGY  +       PYW+++NSWG    + G++ + RG   CG+ ++  
Sbjct: 432  CSPDALDHGVAIVGYDVEKQSKKPKPYWIIKNSWGTHWGEGGYYMLYRGAGVCGVNKMVT 491

Query: 1021 YATID 1025
             A ID
Sbjct: 492  SAIID 496


>gi|205364757|gb|ACI04578.1| cysteine protease-like protein [Robinia pseudoacacia]
          Length = 335

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 151/334 (45%), Gaps = 53/334 (15%)

Query: 650 DNE----NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSE 697
           DNE    N    F  F  K  + YA  EE   RF  FK +    K H +      +G ++
Sbjct: 10  DNEDHVLNAEHHFSTFKSKFSKTYATKEEHDYRFGVFKSNVRRAKLHAKLDPSAVHGVTK 69

Query: 698 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 757
           FSD +P E           R +  +   R         +     +P+ +DWR K      
Sbjct: 70  FSDLTPSEF---------RRQFLGLKPLRLPEHAQKAPILPTHDLPEDFDWRDKGAVTHV 120

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCF 808
            +Q +CGSCWAFS  G LEG + + TG+LV  S  QLV+C   C         SGC+G  
Sbjct: 121 KNQGSCGSCWAFSTTGALEGSHFLATGELVSLSDQQLVDCDHVCDPEQYGACDSGCNGGL 180

Query: 809 FEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 867
              + EY  ++ G++ E+DYPY    G     A D++     +    +  +  + +   L
Sbjct: 181 MNNAFEYILESGGVQREEDYPY---TGRDRGPAIDEANAASVSNFSVVSLD-EDQISANL 236

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DN 916
            K GPL++ +N+  +  Y G           PY    +L H VLLVGYGK          
Sbjct: 237 VKNGPLAIGINAVFMQTYIGG-------VSCPYICGKNLDHGVLLVGYGKAGYAPIRLKE 289

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
            PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 290 KPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 323



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 152/334 (45%), Gaps = 52/334 (15%)

Query: 284 DNE----NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSE 331
           DNE    N    F  F  K  + YA  EE   RF  FK +    K H +      +G ++
Sbjct: 10  DNEDHVLNAEHHFSTFKSKFSKTYATKEEHDYRFGVFKSNVRRAKLHAKLDPSAVHGVTK 69

Query: 332 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 391
           FSD +P E           R +  +   R         +     +P+ +DWR K      
Sbjct: 70  FSDLTPSEF---------RRQFLGLKPLRLPEHAQKAPILPTHDLPEDFDWRDKGAVTHV 120

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-----GC-GGCDG-- 443
            +Q +CGSCWAFS  G LEG + + TG+LV  S  QLV+C   C       C  GC+G  
Sbjct: 121 KNQGSCGSCWAFSTTGALEGSHFLATGELVSLSDQQLVDCDHVCDPEQYGACDSGCNGGL 180

Query: 444 LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKIL 502
           +    EY  ++ G++ E+DYPY    G     A D++     +    +  +  + +   L
Sbjct: 181 MNNAFEYILESGGVQREEDYPY---TGRDRGPAIDEANAASVSNFSVVSLD-EDQISANL 236

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DD 551
            K GPL++G+N+  +  Y G           PY    +L H VLLVGYGK         +
Sbjct: 237 VKNGPLAIGINAVFMQTYIGG-------VSCPYICGKNLDHGVLLVGYGKAGYAPIRLKE 289

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
            PYW+ +NSWG    + G++KI RG N CG++ +
Sbjct: 290 KPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 323



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 115/230 (50%), Gaps = 32/230 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR K       +Q  CGSCWAFS  G LEG + + TG+LV  S  QLV+C   C
Sbjct: 105 LPEDFDWRDKGAVTHVKNQGSCGSCWAFSTTGALEGSHFLATGELVSLSDQQLVDCDHVC 164

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EY  ++ G++ E+DYPY    G     A D++     + 
Sbjct: 165 DPEQYGACDSGCNGGLMNNAFEYILESGGVQREEDYPY---TGRDRGPAIDEANAASVSN 221

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +  +  + +   L K GPL++ +N+  +  Y G           PY    +L H VL
Sbjct: 222 FSVVSLD-EDQISANLVKNGPLAIGINAVFMQTYIGG-------VSCPYICGKNLDHGVL 273

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYGK           PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 274 LVGYGKAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 323


>gi|402770503|gb|AFQ98386.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 120/223 (53%), Gaps = 8/223 (3%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEG++ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGRHFLKNGELVSLSEQNLVDCS 172

Query: 68  KQC--SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 123
           +    +GC+G   E + +Y  +  G+++EK YPY+  +GE   C + K  V    TG   
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKENDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYVE 229

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +     + +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG +
Sbjct: 230 IKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVK 289

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
               YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 290 GGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 120/223 (53%), Gaps = 8/223 (3%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEG++ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGRHFLKNGELVSLSEQNLVDCS 172

Query: 799 KQC--SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 854
           +    +GC+G   E + +Y  +  G+++EK YPY+  +GE   C + K  V    TG   
Sbjct: 173 QSFGNNGCEGGLMEDAFKYIKENDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYVE 229

Query: 855 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
           +     + +KK +   GP+SV +++        +    ++  CS  DL H VL+VGYG +
Sbjct: 230 IKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVK 289

Query: 915 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
               YWLV+NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 290 GGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 119/224 (53%), Gaps = 9/224 (4%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEG++ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGRHFLKNGELVSLSEQNLVDCS 172

Query: 433 KQCSGCGGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKD 488
            Q  G  GC+G  +E   +Y  +  G+++EK YPY   +GE   C + K  V    TG  
Sbjct: 173 -QSFGNNGCEGGLMEDAFKYIKENDGIDTEKSYPYEAVDGE---CRFKKEDVGATDTGYV 228

Query: 489 FLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
            +     + +KK +   GP+SV +++    F   +    ++  CS  DL H VL+VGYG 
Sbjct: 229 EIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGV 288

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           +    YWL +NSW     D+G+  + R  NN CGI   A Y  +
Sbjct: 289 KGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 1017
            V ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266  VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 326  QASYPLV 332


>gi|148927396|gb|ABR19829.1| cysteine proteinase [Elaeis guineensis]
          Length = 358

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 165/346 (47%), Gaps = 38/346 (10%)

Query: 630 ITDQVVARVDTL--AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH 687
           +   V  R+D+L  ++ G L     N L  F  F  + G++Y + EE+K RF  F ++  
Sbjct: 30  LIQSVTERIDSLETSLLGVLG-QTRNALH-FARFAHRYGKRYQSVEEMKLRFAIFMENLE 87

Query: 688 KKHE--------RYGTSEFSDRSPEEILCKTGFKWSER-TYERIVADREKVEKMLMEVEK 738
                       + G + ++D S EE      F+ S     +   A  +   KM  E+  
Sbjct: 88  LIRSTNRRGLPYKLGINRYADMSWEE------FRASRLGAAQNCSATLKGNHKMTDEL-- 139

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
              +P   DWR+  +  P  DQ +CGSCW FS  G LE  Y   TGK +  S+ QLV+CA
Sbjct: 140 ---LPKTKDWREDGIVSPVKDQGSCGSCWTFSTTGALEAAYTQATGKGISLSEQQLVDCA 196

Query: 799 KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
              +  GC+G     + EY  +  GL++E+ YPY   NG    C +    V +   +   
Sbjct: 197 YAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYAGVNG---FCHFKPENVGVKVVESVN 253

Query: 856 HFNGSETMKKILYKYG---PLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVG 910
              G+E   ++L+  G   P+S+         +    +  +D TC  +  D+ HAVL VG
Sbjct: 254 ITLGAE--DELLHAVGLVRPVSIAFEVVSGFRFYKGGVYTSD-TCGRTQMDVNHAVLAVG 310

Query: 911 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           YG ++ +PYWL++NSWG     +G+FK+E G N CGI   A Y  +
Sbjct: 311 YGVENGVPYWLIKNSWGEEWGVDGYFKMELGKNMCGIATCASYPIV 356



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 161/345 (46%), Gaps = 35/345 (10%)

Query: 264 ITDQVVARVDTL--AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH 321
           +   V  R+D+L  ++ G L     N L  F  F  + G++Y + EE+K RF  F ++  
Sbjct: 30  LIQSVTERIDSLETSLLGVLG-QTRNALH-FARFAHRYGKRYQSVEEMKLRFAIFMENLE 87

Query: 322 KKHE--------RYGTSEFSDRSPEEILCKTGFKWSER-TYERIVADREKVEKMLMEVEK 372
                       + G + ++D S EE      F+ S     +   A  +   KM  E+  
Sbjct: 88  LIRSTNRRGLPYKLGINRYADMSWEE------FRASRLGAAQNCSATLKGNHKMTDEL-- 139

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
              +P   DWR+  +  P  DQ +CGSCW FS  G LE  Y   TGK +  S+ QLV+CA
Sbjct: 140 ---LPKTKDWREDGIVSPVKDQGSCGSCWTFSTTGALEAAYTQATGKGISLSEQQLVDCA 196

Query: 433 KQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFL 490
              +  G   GL  Q  EY  +  GL++E+ YPY   NG    C +    V +   +   
Sbjct: 197 YAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYAGVNG---FCHFKPENVGVKVVESVN 253

Query: 491 YFNGSETMKKILYKYG---PLSVGLNS-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGY 546
              G+E   ++L+  G   P+S+         FY G     +    +  D+ HAVL VGY
Sbjct: 254 ITLGAE--DELLHAVGLVRPVSIAFEVVSGFRFYKGGVYTSDTCGRTQMDVNHAVLAVGY 311

Query: 547 GKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           G ++ +PYWL +NSWG     +G+FK+E G N CGI   A Y  +
Sbjct: 312 GVENGVPYWLIKNSWGEEWGVDGYFKMELGKNMCGIATCASYPIV 356



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 116/226 (51%), Gaps = 14/226 (6%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWR+  +  P  DQ  CGSCW FS  G LE  Y   TGK +  S+ QLV+CA
Sbjct: 137 DELLPKTKDWREDGIVSPVKDQGSCGSCWTFSTTGALEAAYTQATGKGISLSEQQLVDCA 196

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
              +  GC+G     + EY  +  GL++E+ YPY   NG    C +    V +   +   
Sbjct: 197 YAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYAGVNG---FCHFKPENVGVKVVESVN 253

Query: 125 HFNGSETMKKILYKYG---PLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVG 179
              G+E   ++L+  G   P+S+         +    +  +D TC  +  D+ HAVL VG
Sbjct: 254 ITLGAE--DELLHAVGLVRPVSIAFEVVSGFRFYKGGVYTSD-TCGRTQMDVNHAVLAVG 310

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           YG ++ +PYWL++NSWG     +G+FK+E G N CGI   A Y  +
Sbjct: 311 YGVENGVPYWLIKNSWGEEWGVDGYFKMELGKNMCGIATCASYPIV 356



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V   +TC  +  D+ HAVL VGYG ++ +PYWL++NSWG     +G+FK+E G N CGI 
Sbjct: 289  VYTSDTCGRTQMDVNHAVLAVGYGVENGVPYWLIKNSWGEEWGVDGYFKMELGKNMCGIA 348

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 349  TCASYPIV 356


>gi|410968296|ref|XP_003990643.1| PREDICTED: cathepsin K [Felis catus]
          Length = 330

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 146/307 (47%), Gaps = 27/307 (8%)

Query: 666 GRQYAND-EEIKERFEYFKQDGHKKHERYGTS-----------EFSDRSPEEILCK-TGF 712
           G+QY N  +EI  R  + K   H        S              D + EE++ K TG 
Sbjct: 35  GKQYNNKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGL 94

Query: 713 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 772
           K        +   R +    L   + +   PD+ D+RKK    P  +Q  CGSCWAFS  
Sbjct: 95  K--------VPPSRSRSNDTLYIPDWESRAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSV 146

Query: 773 GMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKN 831
           G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +Y  +  G++SE  YPY  
Sbjct: 147 GALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV- 205

Query: 832 ANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPI 890
             G+   C Y+ + K     G   +     + +K+ + + GP+SV +++ L      +  
Sbjct: 206 --GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKG 263

Query: 891 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 949
              DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  
Sbjct: 264 VYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIAN 323

Query: 950 IAGYATI 956
           +A +  +
Sbjct: 324 LASFPKM 330



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 146/308 (47%), Gaps = 28/308 (9%)

Query: 300 GRQYAND-EEIKERFEYFKQDGHKKHERYGTS-----------EFSDRSPEEILCK-TGF 346
           G+QY N  +EI  R  + K   H        S              D + EE++ K TG 
Sbjct: 35  GKQYNNKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGL 94

Query: 347 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 406
           K        +   R +    L   + +   PD+ D+RKK    P  +Q  CGSCWAFS  
Sbjct: 95  K--------VPPSRSRSNDTLYIPDWESRAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSV 146

Query: 407 GMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ-AGLESEKDYPYR 465
           G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    +Y  +  G++SE  YPY 
Sbjct: 147 GALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAFQYVQKNRGIDSEDAYPYV 205

Query: 466 NGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTP 524
              G+   C Y+ + K     G   +     + +K+ + + GP+SV +++ L  F   + 
Sbjct: 206 ---GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSK 262

Query: 525 IRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIE 583
               DE C+  +L HAVL VGYG Q    +W+ +NSWG    ++G+  + R  NNACGI 
Sbjct: 263 GVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIA 322

Query: 584 QIAGYATI 591
            +A +  +
Sbjct: 323 NLASFPKM 330



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  + 
Sbjct: 116 APDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 175

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 128
            GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   +    
Sbjct: 176 DGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGN 232

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL VGYG Q    +
Sbjct: 233 EKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKH 292

Query: 189 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 293 WIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 330



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 267  DENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 326

Query: 1021 YATI 1024
            +  +
Sbjct: 327  FPKM 330


>gi|348511930|ref|XP_003443496.1| PREDICTED: cathepsin O-like [Oreochromis niloticus]
          Length = 338

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 147/307 (47%), Gaps = 36/307 (11%)

Query: 658 FKAFIVKRGRQY-ANDEEIKERFEYFKQ-----------DGHKKHERYGTSEFSDRSPEE 705
           F AF  +  R Y  + EE   R   F++               +  +YG + FSD S EE
Sbjct: 42  FGAFRKQFHRTYEVSSEEFSRRHLSFQRATIRHTYLNSFSTETQSAKYGINRFSDLSQEE 101

Query: 706 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
                        Y   V +R  +   L   E    +PD +DWR K       DQ ACGS
Sbjct: 102 F---------RDLYLGAVYERAPLFSGLSVKE----LPDKFDWRDKAAVAAVQDQQACGS 148

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ--AGLES 823
           CWAFS+ G ++  +AI   +L + S  Q+V+C+ Q +GC+G     ++ +  Q    L +
Sbjct: 149 CWAFSVVGAIQSVHAIGGSQLEQLSVQQVVDCSYQNAGCNGGSTTRALNWLKQTRVKLVT 208

Query: 824 EKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSD 880
           + +YPYK        F  ++    +K FT  D   F+G E  M   L +YGPL  ++++ 
Sbjct: 209 QSEYPYKAKTEICHFFSQSHGGVAIKNFTTHD---FSGQEKAMMGQLVQYGPLVAIVDAV 265

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
              DY G  I+ +   CS     HA+L+VGY    +IPYW+V+NSWG    +EG+  I+ 
Sbjct: 266 SWQDYLGGIIQHH---CSSQWSNHAILIVGYDTTGDIPYWIVQNSWGTRWGNEGYVYIKI 322

Query: 941 GNNACGI 947
           G N CGI
Sbjct: 323 GGNICGI 329



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 115/211 (54%), Gaps = 11/211 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR K       DQ  CGSCWAFS+ G ++  +AI   +L + S  Q+V+C+ Q 
Sbjct: 125 LPDKFDWRDKAAVAAVQDQQACGSCWAFSVVGAIQSVHAIGGSQLEQLSVQQVVDCSYQN 184

Query: 71  SGCDGCFFEPSIEYTHQ--AGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHF 126
           +GC+G     ++ +  Q    L ++ +YPYK        F  ++    +K FT  D   F
Sbjct: 185 AGCNGGSTTRALNWLKQTRVKLVTQSEYPYKAKTEICHFFSQSHGGVAIKNFTTHD---F 241

Query: 127 NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           +G E  M   L +YGPL  ++++    DY G  I+ +   CS     HA+L+VGY    +
Sbjct: 242 SGQEKAMMGQLVQYGPLVAIVDAVSWQDYLGGIIQHH---CSSQWSNHAILIVGYDTTGD 298

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           IPYW+V+NSWG    +EG+  I+ G N CGI
Sbjct: 299 IPYWIVQNSWGTRWGNEGYVYIKIGGNICGI 329



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 143/308 (46%), Gaps = 37/308 (12%)

Query: 292 FKAFIVKRGRQY-ANDEEIKERFEYFKQ-----------DGHKKHERYGTSEFSDRSPEE 339
           F AF  +  R Y  + EE   R   F++               +  +YG + FSD S EE
Sbjct: 42  FGAFRKQFHRTYEVSSEEFSRRHLSFQRATIRHTYLNSFSTETQSAKYGINRFSDLSQEE 101

Query: 340 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
                        Y   V +R  +   L   E    +PD +DWR K       DQ ACGS
Sbjct: 102 F---------RDLYLGAVYERAPLFSGLSVKE----LPDKFDWRDKAAVAAVQDQQACGS 148

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ--AGLE 457
           CWAFS+ G ++  +AI   +L + S  Q+V+C+ Q +GC G     + + +  Q    L 
Sbjct: 149 CWAFSVVGAIQSVHAIGGSQLEQLSVQQVVDCSYQNAGCNG-GSTTRALNWLKQTRVKLV 207

Query: 458 SEKDYPYRNGNG--EKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS 514
           ++ +YPY+        F  ++    +K FT  D   F+G E  M   L +YGPL   +++
Sbjct: 208 TQSEYPYKAKTEICHFFSQSHGGVAIKNFTTHD---FSGQEKAMMGQLVQYGPLVAIVDA 264

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
                Y G  I+ +   CS     HA+L+VGY    DIPYW+ +NSWG    +EG+  I+
Sbjct: 265 VSWQDYLGGIIQHH---CSSQWSNHAILIVGYDTTGDIPYWIVQNSWGTRWGNEGYVYIK 321

Query: 575 RGNNACGI 582
            G N CGI
Sbjct: 322 IGGNICGI 329



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 33/51 (64%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS     HA+L+VGY    DIPYW+V+NSWG    +EG+  I+ G N CGI
Sbjct: 279  CSSQWSNHAILIVGYDTTGDIPYWIVQNSWGTRWGNEGYVYIKIGGNICGI 329


>gi|312381833|gb|EFR27483.1| hypothetical protein AND_05794 [Anopheles darlingi]
          Length = 344

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 163/326 (50%), Gaps = 27/326 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 701
           + E + AF ++  ++Y ++ E + R + + Q+ HK  KH           R   ++++D 
Sbjct: 23  VKEEWNAFKLQHRKKYDSESEERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYADL 82

Query: 702 SPEEIL-CKTGFKWSERTYERIVADRE--KVEKMLMEVE-KDGPVPDAWDWRKKNVTGPA 757
             EE +    GF  S     +++   +   +E+ +  +E  +  VP   DWR+K    P 
Sbjct: 83  LHEEFVHTLNGFNRSAAAGSKLLGREQLMTIEEPITWIEPANVDVPTTIDWREKGAVTPV 142

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEY 815
            DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ +   +GC+G   + + +Y
Sbjct: 143 KDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFQY 202

Query: 816 TH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYGP 872
                G+++EK YPY+  + E   C Y+   +   T K F+    G E  +KK L   GP
Sbjct: 203 VKDNKGIDTEKAYPYEAIDDE---CHYNPKAIGA-TDKGFVDIPQGDEKALKKALATVGP 258

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGP 931
           +SV +++        +     +  C    L H VL VGYG  +D   YWLV+NSWG    
Sbjct: 259 VSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGYGTTEDGEDYWLVKNSWGTTWG 318

Query: 932 DEGFFKIERGN-NACGIEQIAGYATI 956
           D+G+ K+ R   N CGI   A Y  +
Sbjct: 319 DQGYVKMARNRENHCGIATTASYPLV 344



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 162/327 (49%), Gaps = 28/327 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 335
           + E + AF ++  ++Y ++ E + R + + Q+ HK  KH           R   ++++D 
Sbjct: 23  VKEEWNAFKLQHRKKYDSESEERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYADL 82

Query: 336 SPEEIL-CKTGFKWSERTYERIVADRE--KVEKMLMEVE-KDGPVPDAWDWRKKNVTGPA 391
             EE +    GF  S     +++   +   +E+ +  +E  +  VP   DWR+K    P 
Sbjct: 83  LHEEFVHTLNGFNRSAAAGSKLLGREQLMTIEEPITWIEPANVDVPTTIDWREKGAVTPV 142

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIE 449
            DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ +  G  GC+G  ++   +
Sbjct: 143 KDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTK-YGNNGCNGGLMDNAFQ 201

Query: 450 YTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSE-TMKKILYKYG 506
           Y     G+++EK YPY   + E   C Y+   +   T K F+    G E  +KK L   G
Sbjct: 202 YVKDNKGIDTEKAYPYEAIDDE---CHYNPKAIGA-TDKGFVDIPQGDEKALKKALATVG 257

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIG 565
           P+SV +++    F   +     +  C    L H VL VGYG  +D   YWL +NSWG   
Sbjct: 258 PVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGYGTTEDGEDYWLVKNSWGTTW 317

Query: 566 PDEGFFKIERGN-NACGIEQIAGYATI 591
            D+G+ K+ R   N CGI   A Y  +
Sbjct: 318 GDQGYVKMARNRENHCGIATTASYPLV 344



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           VP   DWR+K    P  DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ + 
Sbjct: 127 VPTTIDWREKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKY 186

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + + +Y     G+++EK YPY+  + E   C Y+   +   T K F+   
Sbjct: 187 GNNGCNGGLMDNAFQYVKDNKGIDTEKAYPYEAIDDE---CHYNPKAIGA-TDKGFVDIP 242

Query: 127 NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQD 184
            G E  +KK L   GP+SV +++        +     +  C    L H VL VGYG  +D
Sbjct: 243 QGDEKALKKALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGYGTTED 302

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
              YWLV+NSWG    D+G+ K+ R   N CGI   A Y  +
Sbjct: 303 GEDYWLVKNSWGTTWGDQGYVKMARNRENHCGIATTASYPLV 344



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D+GF  I +G+     + +A    + V               V  +  C    L H VL 
Sbjct: 235  DKGFVDIPQGDEKALKKALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLA 294

Query: 977  VGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
            VGYG  +D   YWLV+NSWG    D+G+ K+ R   N CGI   A Y  +
Sbjct: 295  VGYGTTEDGEDYWLVKNSWGTTWGDQGYVKMARNRENHCGIATTASYPLV 344


>gi|394331743|gb|AFN27094.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 31/326 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NACGIEQIAGYATIDVVKNDETCSPY 968
           NAC    + GY     V   ++ +PY
Sbjct: 327 NAC---LLTGYPV--SVHESQSPTPY 347



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|165969032|ref|YP_001650932.1| peptidase [Orgyia leucostigma NPV]
 gi|164663528|gb|ABY65748.1| peptidase [Orgyia leucostigma NPV]
          Length = 328

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 24/312 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 709
           F++F+    + Y +D E  +R+  FK +  + + +        Y  ++FSD S  EI+ K
Sbjct: 29  FESFVANYQKNYNDDLEKSKRYTIFKDNLEEINVKNRLNDTAVYRINKFSDLSKTEIISK 88

Query: 710 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
            TG      T            K ++  +  G  P  +DWR++N      +Q +CG+CWA
Sbjct: 89  YTGLNAPSET--------TNFCKTIVLDQPPGKGPLNFDWRQQNKVTSIKNQGSCGACWA 140

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           F+    +E QYAI+  + +  S+ QL++C     GC G     + E   Q  G++ E +Y
Sbjct: 141 FATLASIESQYAIRNDRHINLSEQQLIDCDYVDMGCYGGLLHTAFEQMIQMGGVKQEHEY 200

Query: 828 PYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 886
           PY   N + +     D S V    G         E +K +L   GP+ + +++  I +Y 
Sbjct: 201 PYAGVNKQCELNDITDDSFVVRIKGCYRYVVVREEKLKDLLRAVGPIPIAIDASGIVNYY 260

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
              I      C  Y L HAVLLVGYG  + +PYW  +N+WG    + G+F++ +  NACG
Sbjct: 261 KGVI----NYCENYGLNHAVLLVGYGVDNGVPYWTFKNTWGVDWGENGYFRLRQNINACG 316

Query: 947 I-EQIAGYATID 957
           +  ++A  A ID
Sbjct: 317 MANELASSAVID 328



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 153/316 (48%), Gaps = 31/316 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 343
           F++F+    + Y +D E  +R+  FK +  + + +        Y  ++FSD S  EI+ K
Sbjct: 29  FESFVANYQKNYNDDLEKSKRYTIFKDNLEEINVKNRLNDTAVYRINKFSDLSKTEIISK 88

Query: 344 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
            TG      T            K ++  +  G  P  +DWR++N      +Q +CG+CWA
Sbjct: 89  YTGLNAPSET--------TNFCKTIVLDQPPGKGPLNFDWRQQNKVTSIKNQGSCGACWA 140

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG---CDGLEQPIEYTHQAGLESE 459
           F+    +E QYAI+  + +  S+ QL++C     GC G       EQ I+     G++ E
Sbjct: 141 FATLASIESQYAIRNDRHINLSEQQLIDCDYVDMGCYGGLLHTAFEQMIQ---MGGVKQE 197

Query: 460 KDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN-SHLI 517
            +YPY   N + +     D S V    G         E +K +L   GP+ + ++ S ++
Sbjct: 198 HEYPYAGVNKQCELNDITDDSFVVRIKGCYRYVVVREEKLKDLLRAVGPIPIAIDASGIV 257

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
           ++Y G         C  Y L HAVLLVGYG  + +PYW  +N+WG    + G+F++ +  
Sbjct: 258 NYYKGVI-----NYCENYGLNHAVLLVGYGVDNGVPYWTFKNTWGVDWGENGYFRLRQNI 312

Query: 578 NACGI-EQIAGYATID 592
           NACG+  ++A  A ID
Sbjct: 313 NACGMANELASSAVID 328



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR++N      +Q  CG+CWAF+    +E QYAI+  + +  S+ QL++C  
Sbjct: 112 GKGPLNFDWRQQNKVTSIKNQGSCGACWAFATLASIESQYAIRNDRHINLSEQQLIDCDY 171

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHF 126
              GC G     + E   Q  G++ E +YPY   N + +     D S V    G      
Sbjct: 172 VDMGCYGGLLHTAFEQMIQMGGVKQEHEYPYAGVNKQCELNDITDDSFVVRIKGCYRYVV 231

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
              E +K +L   GP+ + +++  I +Y    I      C  Y L HAVLLVGYG  + +
Sbjct: 232 VREEKLKDLLRAVGPIPIAIDASGIVNYYKGVI----NYCENYGLNHAVLLVGYGVDNGV 287

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYATID 226
           PYW  +N+WG    + G+F++ +  NACG+  ++A  A ID
Sbjct: 288 PYWTFKNTWGVDWGENGYFRLRQNINACGMANELASSAVID 328



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYAT 1023
            C  Y L HAVLLVGYG  + +PYW  +N+WG    + G+F++ +  NACG+  ++A  A 
Sbjct: 267  CENYGLNHAVLLVGYGVDNGVPYWTFKNTWGVDWGENGYFRLRQNINACGMANELASSAV 326

Query: 1024 ID 1025
            ID
Sbjct: 327  ID 328


>gi|2804262|dbj|BAA24442.1| cysteine proteinase [Sitophilus zeamais]
          Length = 338

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 158/324 (48%), Gaps = 28/324 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 335
           + E + +F ++  + Y ++ E + R + F ++ HK  KH +           G ++++D 
Sbjct: 23  VQEQWSSFKMQHSKNYDSETEERFRMKIFMENAHKVAKHNKLFSQGFVKFKLGLNKYADM 82

Query: 336 SPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
              E +    GF    +T   I+   +  + +      +  +PD  DWR K       DQ
Sbjct: 83  LHHEFVSTLNGFN---KTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTEVKDQ 139

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ +  G  GC+G  ++    Y  
Sbjct: 140 GHCGSCWSFSATGSLEGQHFRKTGKLVSLSEQNLVDCSGRY-GNNGCNGGLMDNAFRYIK 198

Query: 453 -QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN--GSETMKKILYKYGPLS 509
              G+++EK YPY     E  KC Y K++    T K F+       + +K  +   GP+S
Sbjct: 199 DNGGIDTEKSYPYL---AEDEKCHY-KAQNSGATDKGFVDIEEANEDDLKAAVATVGPVS 254

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDE 568
           + +++    F   +    +D  CS  +L H VL+VGYG  DD   YWL +NSWGP     
Sbjct: 255 IAIDASHETFQLYSDGVYSDPECSSQELDHGVLVVGYGTSDDGQDYWLVKNSWGPSWGLN 314

Query: 569 GFFKIERG-NNACGIEQIAGYATI 591
           G+ K+ R  +N CG+   A Y  +
Sbjct: 315 GYIKMARNQDNMCGVASQASYPLV 338



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 158/323 (48%), Gaps = 27/323 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 701
           + E + +F ++  + Y ++ E + R + F ++ HK  KH +           G ++++D 
Sbjct: 23  VQEQWSSFKMQHSKNYDSETEERFRMKIFMENAHKVAKHNKLFSQGFVKFKLGLNKYADM 82

Query: 702 SPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
              E +    GF    +T   I+   +  + +      +  +PD  DWR K       DQ
Sbjct: 83  LHHEFVSTLNGFN---KTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTEVKDQ 139

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH- 817
             CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ +   +GC+G   + +  Y   
Sbjct: 140 GHCGSCWSFSATGSLEGQHFRKTGKLVSLSEQNLVDCSGRYGNNGCNGGLMDNAFRYIKD 199

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSV 875
             G+++EK YPY     E  KC Y K++    T K F+       + +K  +   GP+S+
Sbjct: 200 NGGIDTEKSYPYL---AEDEKCHY-KAQNSGATDKGFVDIEEANEDDLKAAVATVGPVSI 255

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEG 934
            +++        +    +D  CS  +L H VL+VGYG  D+   YWLV+NSWGP     G
Sbjct: 256 AIDASHETFQLYSDGVYSDPECSSQELDHGVLVVGYGTSDDGQDYWLVKNSWGPSWGLNG 315

Query: 935 FFKIERG-NNACGIEQIAGYATI 956
           + K+ R  +N CG+   A Y  +
Sbjct: 316 YIKMARNQDNMCGVASQASYPLV 338



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR K       DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ + 
Sbjct: 121 LPDTVDWRDKGAVTEVKDQGHCGSCWSFSATGSLEGQHFRKTGKLVSLSEQNLVDCSGRY 180

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GC+G   + +  Y     G+++EK YPY     E  KC Y K++    T K F+   
Sbjct: 181 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYL---AEDEKCHY-KAQNSGATDKGFVDIE 236

Query: 128 --GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K  +   GP+S+ +++        +    +D  CS  +L H VL+VGYG  D+
Sbjct: 237 EANEDDLKAAVATVGPVSIAIDASHETFQLYSDGVYSDPECSSQELDHGVLVVGYGTSDD 296

Query: 186 -IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
              YWLV+NSWGP     G+ K+ R  +N CG+   A Y  +
Sbjct: 297 GQDYWLVKNSWGPSWGLNGYIKMARNQDNMCGVASQASYPLV 338



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 17/112 (15%)

Query: 930  GPDEGFFKIERGNN-----------ACGIEQIAGYATI----DVVKNDETCSPYDLGHAV 974
              D+GF  IE  N               I   A + T     D V +D  CS  +L H V
Sbjct: 227  ATDKGFVDIEEANEDDLKAAVATVGPVSIAIDASHETFQLYSDGVYSDPECSSQELDHGV 286

Query: 975  LLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            L+VGYG  DD   YWLV+NSWGP     G+ K+ R  +N CG+   A Y  +
Sbjct: 287  LVVGYGTSDDGQDYWLVKNSWGPSWGLNGYIKMARNQDNMCGVASQASYPLV 338


>gi|33112581|gb|AAP94046.1| cathepsin-L-like cysteine peptidase 02 [Tenebrio molitor]
          Length = 337

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 166/325 (51%), Gaps = 32/325 (9%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 701
           + E + AF +   +QY +D E + R + F ++ H   KH +           G ++++D 
Sbjct: 23  VQEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 702 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
              E +    GF    RT   + +  E  + +      +  +P   DWR K    P  DQ
Sbjct: 83  LHHEFVQVLNGFN---RTKSGLRSG-ESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQ 138

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTH- 817
             CGSCW+FS  G LEGQ+  K+GKLV  S+  LV+C+++   +GC+G   + +  Y   
Sbjct: 139 GQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKA 198

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYGPLSV 875
             G+++E+ YPYK    E  KC Y K K K  T + ++   +G+E  ++  +   GP+SV
Sbjct: 199 NGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSV 254

Query: 876 LLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPD 932
            +++       Y+G    + +  CSP  L H VL+VGYG +D+   YWLV+NSWG    D
Sbjct: 255 AIDASHQSFQLYSGGVYYEPE--CSPSQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGD 312

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+ K+ R  +N CGI   A Y  +
Sbjct: 313 QGYIKMARNRDNNCGIATEASYPLV 337



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 163/324 (50%), Gaps = 29/324 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 335
           + E + AF +   +QY +D E + R + F ++ H   KH +           G ++++D 
Sbjct: 23  VQEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 336 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
              E +    GF    RT   + +  E  + +      +  +P   DWR K    P  DQ
Sbjct: 83  LHHEFVQVLNGFN---RTKSGLRSG-ESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQ 138

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCW+FS  G LEGQ+  K+GKLV  S+  LV+C+++  G  GC+G  ++    Y  
Sbjct: 139 GQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKF-GNNGCNGGLMDNAFRYIK 197

Query: 453 -QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSE-TMKKILYKYGPLS 509
              G+++E+ YPY+    E  KC Y K K K  T + ++   +G+E  ++  +   GP+S
Sbjct: 198 ANGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVS 253

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDE 568
           V +++    F   +     +  CSP  L H VL+VGYG +DD   YWL +NSWG    D+
Sbjct: 254 VAIDASHQSFQLYSGGVYYEPECSPSQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQ 313

Query: 569 GFFKIERG-NNACGIEQIAGYATI 591
           G+ K+ R  +N CGI   A Y  +
Sbjct: 314 GYIKMARNRDNNCGIATEASYPLV 337



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 126/224 (56%), Gaps = 15/224 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P   DWR K    P  DQ  CGSCW+FS  G LEGQ+  K+GKLV  S+  LV+C+++ 
Sbjct: 120 LPGQIDWRDKGAVTPVKDQGQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKF 179

Query: 71  --SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + +  Y     G+++E+ YPYK    E  KC Y K K K  T + ++   
Sbjct: 180 GNNGCNGGLMDNAFRYIKANGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGYVDIE 235

Query: 127 NGSE-TMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +G+E  ++  +   GP+SV +++       Y+G    + +  CSP  L H VL+VGYG +
Sbjct: 236 SGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPE--CSPSQLDHGVLVVGYGTE 293

Query: 184 DN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           D+   YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 294 DDGTDYWLVKNSWGKSWGDQGYIKMARNRDNNCGIATEASYPLV 337



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D G+  IE GN       +A    + V               V  +  CSP  L H VL+
Sbjct: 228  DRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPECSPSQLDHGVLV 287

Query: 977  VGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG +DD   YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 288  VGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNRDNNCGIATEASYPLV 337


>gi|403376023|gb|EJY87990.1| Cathepsin L [Oxytricha trifallax]
          Length = 343

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 168/347 (48%), Gaps = 59/347 (17%)

Query: 636 ARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---- 691
           A  +  AIE  +T DN      F  ++ K G+ Y   EE + R+E ++++  K  +    
Sbjct: 27  ASTNLFAIE--VTQDNV----AFANYLAKYGKSYGTKEEFQFRYEQYQKNMAKVAQYNGQ 80

Query: 692 -----RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPD 744
                R G ++F+D +PEE             Y+ ++  + + + M +E     +   P 
Sbjct: 81  NGNTFRLGINKFTDYTPEE-------------YKVLLGYKPQSKPMTLEASYLSEENTPA 127

Query: 745 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ-CSG 803
           + DWR+K    P  DQ  CGSCWAFS  G LEG Y I   KL+  S+ QLV+C+    +G
Sbjct: 128 SIDWREKGAVTPVKDQGQCGSCWAFSATGALEGHYQISNNKLISISEQQLVDCSHDGNNG 187

Query: 804 CDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-----N 858
           C+G     + +Y  +  +E E DY Y   + +  KC+Y+ SK K+    +  HF     N
Sbjct: 188 CNGGEMYLAFDYASKNKMELESDYVY---HAKDEKCSYEASKGKM----EADHFQRVPKN 240

Query: 859 GSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG---- 912
               +K  L   GP+SV + +D  +   Y+G  +  N + C   +L H VL VG+G    
Sbjct: 241 SPAQLKAALAN-GPVSVAIEADNEVFQAYDGGIL--NSKECGT-NLDHGVLAVGFGHDEA 296

Query: 913 -KQDNIPYWLVRNSWGPIGPDEGFFKIER--GNNACGIEQIAGYATI 956
            KQD   Y++V+NSWG    D GF KI    G   CGI+  A Y  +
Sbjct: 297 SKQD---YFIVKNSWGQYWGDHGFIKIAAVDGEGICGIQMDAVYPIV 340



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 161/344 (46%), Gaps = 52/344 (15%)

Query: 270 ARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---- 325
           A  +  AIE  +T DN      F  ++ K G+ Y   EE + R+E ++++  K  +    
Sbjct: 27  ASTNLFAIE--VTQDNV----AFANYLAKYGKSYGTKEEFQFRYEQYQKNMAKVAQYNGQ 80

Query: 326 -----RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPD 378
                R G ++F+D +PEE             Y+ ++  + + + M +E     +   P 
Sbjct: 81  NGNTFRLGINKFTDYTPEE-------------YKVLLGYKPQSKPMTLEASYLSEENTPA 127

Query: 379 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 438
           + DWR+K    P  DQ  CGSCWAFS  G LEG Y I   KL+  S+ QLV+C+    G 
Sbjct: 128 SIDWREKGAVTPVKDQGQCGSCWAFSATGALEGHYQISNNKLISISEQQLVDCSH--DGN 185

Query: 439 GGCDGLEQ--PIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE 496
            GC+G E     +Y  +  +E E DY Y     +  KC+Y+ SK K+           S 
Sbjct: 186 NGCNGGEMYLAFDYASKNKMELESDYVYH---AKDEKCSYEASKGKMEADHFQRVPKNSP 242

Query: 497 TMKKILYKYGPLSVGL--NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-----KQ 549
              K     GP+SV +  ++ +   Y+G  +  N + C   +L H VL VG+G     KQ
Sbjct: 243 AQLKAALANGPVSVAIEADNEVFQAYDGGIL--NSKECGT-NLDHGVLAVGFGHDEASKQ 299

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIER--GNNACGIEQIAGYATI 591
           D   Y++ +NSWG    D GF KI    G   CGI+  A Y  +
Sbjct: 300 D---YFIVKNSWGQYWGDHGFIKIAAVDGEGICGIQMDAVYPIV 340



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 118/230 (51%), Gaps = 29/230 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
            P + DWR+K    P  DQ  CGSCWAFS  G LEG Y I   KL+  S+ QLV+C+   
Sbjct: 125 TPASIDWREKGAVTPVKDQGQCGSCWAFSATGALEGHYQISNNKLISISEQQLVDCSHDG 184

Query: 70  CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--- 126
            +GC+G     + +Y  +  +E E DY Y   + +  KC+Y+ SK K+    +  HF   
Sbjct: 185 NNGCNGGEMYLAFDYASKNKMELESDYVY---HAKDEKCSYEASKGKM----EADHFQRV 237

Query: 127 --NGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG- 181
             N    +K  L   GP+SV + +D  +   Y+G  +  N + C   +L H VL VG+G 
Sbjct: 238 PKNSPAQLKAALAN-GPVSVAIEADNEVFQAYDGGIL--NSKECGT-NLDHGVLAVGFGH 293

Query: 182 ----KQDNIPYWLVRNSWGPIGPDEGFFKIER--GNNACGIEQIAGYATI 225
               KQD   Y++V+NSWG    D GF KI    G   CGI+  A Y  +
Sbjct: 294 DEASKQD---YFIVKNSWGQYWGDHGFIKIAAVDGEGICGIQMDAVYPIV 340



 Score = 43.5 bits (101), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 11/73 (15%)

Query: 959  VKNDETCSPYDLGHAVLLVGYG-----KQDDIPYWLVRNSWGPIGPDEGFFKIER--GNN 1011
            + N + C   +L H VL VG+G     KQD   Y++V+NSWG    D GF KI    G  
Sbjct: 272  ILNSKECGT-NLDHGVLAVGFGHDEASKQD---YFIVKNSWGQYWGDHGFIKIAAVDGEG 327

Query: 1012 ACGIEQIAGYATI 1024
             CGI+  A Y  +
Sbjct: 328  ICGIQMDAVYPIV 340


>gi|431896622|gb|ELK06034.1| Cathepsin K [Pteropus alecto]
          Length = 330

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +   R +    L   + +G  PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPPSRSRSNDTLYIPDWEGRAPDSVDYRKKGYV 128

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 129 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 188

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 189 YVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYKEIPEGNEKALKRAVARVGP 245

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L            DE C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 246 ISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGRKHWIIKNSWGENWGN 305

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 306 KGYVLMARNKNNACGIANLASFPRM 330



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +   R +    L   + +G  PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPPSRSRSNDTLYIPDWEGRAPDSVDYRKKGYV 128

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 129 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 187

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 188 QYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYKEIPEGNEKALKRAVARVG 244

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F         DE C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 245 PISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGRKHWIIKNSWGENWG 304

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 305 NKGYVLMARNKNNACGIANLASFPRM 330



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 113 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 172

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 173 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYKEIP 229

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L            DE C+  +L HAVL VGYG Q  
Sbjct: 230 EGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 290 RKHWIIKNSWGENWGNKGYVLMARNKNNACGIANLASFPRM 330



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 267  DENCNSDNLNHAVLAVGYGIQKGRKHWIIKNSWGENWGNKGYVLMARNKNNACGIANLAS 326

Query: 1021 YATI 1024
            +  +
Sbjct: 327  FPRM 330


>gi|405958752|gb|EKC24846.1| Cathepsin L1 [Crassostrea gigas]
          Length = 290

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 28/307 (9%)

Query: 661 FIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYE 720
            +++RG   AN + I +  + F++  H      G +EF+D S EE L   G     R   
Sbjct: 2   LLIRRGIWEANLDYINQHNDEFQRGAHSY--TLGLNEFADLSHEEFLHLYGGGIRPRDSV 59

Query: 721 RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYA 780
               D + V      V+  G +P   DWRK+   GP G+Q ACGSCWAF+  G LEGQ  
Sbjct: 60  SSDPDTDIV------VDTSG-LPLEVDWRKEGWVGPIGNQFACGSCWAFTATGALEGQVR 112

Query: 781 IKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKF 837
            KTGKL+  S  Q+++C+++    GC+G   + + +Y H   G+ES   YPYK A   + 
Sbjct: 113 NKTGKLIVLSVQQMMDCSEKWGNHGCEGGLMDAAFKYIHDVGGIESNASYPYKPA---EE 169

Query: 838 KCAYDKSKV--KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK--- 892
           KC ++KS V  K+   KD       E++   +   GP+S  L++     ++   + K   
Sbjct: 170 KCKFNKSAVVAKVKGYKDLP--KSEESLMVAVATVGPISAALDA----SHSSFQLYKSGV 223

Query: 893 -NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQI 950
            ++  CS   + H++++VGYG  D   YW+ +NSWG    D+G+  + +  NN CGI   
Sbjct: 224 YDEPNCSSGQVDHSLVVVGYGLMDGKKYWIAKNSWGTSWGDKGYILLSKDKNNQCGIANT 283

Query: 951 AGYATID 957
             Y  ++
Sbjct: 284 LSYPILE 290



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 21/304 (6%)

Query: 295 FIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYE 354
            +++RG   AN + I +  + F++  H      G +EF+D S EE L   G     R   
Sbjct: 2   LLIRRGIWEANLDYINQHNDEFQRGAHSY--TLGLNEFADLSHEEFLHLYGGGIRPRDSV 59

Query: 355 RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYA 414
               D + V      V+  G +P   DWRK+   GP G+Q ACGSCWAF+  G LEGQ  
Sbjct: 60  SSDPDTDIV------VDTSG-LPLEVDWRKEGWVGPIGNQFACGSCWAFTATGALEGQVR 112

Query: 415 IKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEK 471
            KTGKL+  S  Q+++C+++  G  GC+G  ++   +Y H   G+ES   YPY+     +
Sbjct: 113 NKTGKLIVLSVQQMMDCSEKW-GNHGCEGGLMDAAFKYIHDVGGIESNASYPYKPA---E 168

Query: 472 FKCAYDKSKV--KLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKND 529
            KC ++KS V  K+   KD       E++   +   GP+S  L++    F        ++
Sbjct: 169 EKCKFNKSAVVAKVKGYKDLP--KSEESLMVAVATVGPISAALDASHSSFQLYKSGVYDE 226

Query: 530 ETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 588
             CS   + H++++VGYG  D   YW+A+NSWG    D+G+  + +  NN CGI     Y
Sbjct: 227 PNCSSGQVDHSLVVVGYGLMDGKKYWIAKNSWGTSWGDKGYILLSKDKNNQCGIANTLSY 286

Query: 589 ATID 592
             ++
Sbjct: 287 PILE 290



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 19/226 (8%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P   DWRK+   GP G+Q  CGSCWAF+  G LEGQ   KTGKL+  S  Q+++C+++ 
Sbjct: 74  LPLEVDWRKEGWVGPIGNQFACGSCWAFTATGALEGQVRNKTGKLIVLSVQQMMDCSEKW 133

Query: 71  S--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLH 125
              GC+G   + + +Y H   G+ES   YPYK A   + KC ++KS V  K+   KD   
Sbjct: 134 GNHGCEGGLMDAAFKYIHDVGGIESNASYPYKPA---EEKCKFNKSAVVAKVKGYKDLP- 189

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETCSPYDLGHAVLLVGYG 181
               E++   +   GP+S  L++     ++   + K    ++  CS   + H++++VGYG
Sbjct: 190 -KSEESLMVAVATVGPISAALDA----SHSSFQLYKSGVYDEPNCSSGQVDHSLVVVGYG 244

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATID 226
             D   YW+ +NSWG    D+G+  + +  NN CGI     Y  ++
Sbjct: 245 LMDGKKYWIAKNSWGTSWGDKGYILLSKDKNNQCGIANTLSYPILE 290



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V ++  CS   + H++++VGYG  D   YW+ +NSWG    D+G+  + +  NN CGI  
Sbjct: 223  VYDEPNCSSGQVDHSLVVVGYGLMDGKKYWIAKNSWGTSWGDKGYILLSKDKNNQCGIAN 282

Query: 1018 IAGYATID 1025
               Y  ++
Sbjct: 283  TLSYPILE 290


>gi|261289779|ref|XP_002611751.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
 gi|229297123|gb|EEN67761.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
          Length = 330

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 159/335 (47%), Gaps = 34/335 (10%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY------- 327
           +A   SL+F+++     ++AF +K  + Y+  EE   R  +  QD  K  E +       
Sbjct: 12  MATAASLSFESQ-----WEAFKIKHDKVYSEKEEYARRLIF--QDNLKTIESHNQEADTG 64

Query: 328 ------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 381
                 G ++F+D +  E L +        +       R     M      +  V D  D
Sbjct: 65  KHSYWLGVNQFADMTHAEYLNQVIGGCLITSNLTKTGSRATYRYM-----PNMQVNDTVD 119

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGC 441
           WR K +     DQ  CGSCWAFS  G LEGQ+A  TG LV  S+  LV+C++Q  G  GC
Sbjct: 120 WRDKGLVTDIKDQGQCGSCWAFSTTGSLEGQHAKATGTLVSLSEQNLVDCSRQ-EGNKGC 178

Query: 442 DG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-T 497
           +G  ++Q  +Y  Q  G+++E+ YPY+  N    +C +D S +           +G E  
Sbjct: 179 EGGDMDQGFQYIIQNKGIDTEQCYPYKAKN---HRCKFDNSCIGATMSSFTDVTSGDEDA 235

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLA 557
           +K+     GP+SVG+++    F   +    N+  CS   L H VL+VGYG      YWL 
Sbjct: 236 LKQACANIGPISVGIDASHQSFQFYSSGVYNEFECSSTKLDHGVLVVGYGTYGSKDYWLV 295

Query: 558 RNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           +NSWG +  +EG+  + R  +N CG+   A +  +
Sbjct: 296 KNSWGTVWGNEGYIMMSRNKDNQCGVATDASFPVV 330



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 156/334 (46%), Gaps = 33/334 (9%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY------- 693
           +A   SL+F+++     ++AF +K  + Y+  EE   R  +  QD  K  E +       
Sbjct: 12  MATAASLSFESQ-----WEAFKIKHDKVYSEKEEYARRLIF--QDNLKTIESHNQEADTG 64

Query: 694 ------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 747
                 G ++F+D +  E L +        +       R     M      +  V D  D
Sbjct: 65  KHSYWLGVNQFADMTHAEYLNQVIGGCLITSNLTKTGSRATYRYM-----PNMQVNDTVD 119

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCD 805
           WR K +     DQ  CGSCWAFS  G LEGQ+A  TG LV  S+  LV+C++Q    GC+
Sbjct: 120 WRDKGLVTDIKDQGQCGSCWAFSTTGSLEGQHAKATGTLVSLSEQNLVDCSRQEGNKGCE 179

Query: 806 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TM 863
           G   +   +Y  Q  G+++E+ YPYK  N    +C +D S +           +G E  +
Sbjct: 180 GGDMDQGFQYIIQNKGIDTEQCYPYKAKN---HRCKFDNSCIGATMSSFTDVTSGDEDAL 236

Query: 864 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 923
           K+     GP+SV +++        +    N+  CS   L H VL+VGYG   +  YWLV+
Sbjct: 237 KQACANIGPISVGIDASHQSFQFYSSGVYNEFECSSTKLDHGVLVVGYGTYGSKDYWLVK 296

Query: 924 NSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           NSWG +  +EG+  + R  +N CG+   A +  +
Sbjct: 297 NSWGTVWGNEGYIMMSRNKDNQCGVATDASFPVV 330



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 115/220 (52%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           V D  DWR K +     DQ  CGSCWAFS  G LEGQ+A  TG LV  S+  LV+C++Q 
Sbjct: 114 VNDTVDWRDKGLVTDIKDQGQCGSCWAFSTTGSLEGQHAKATGTLVSLSEQNLVDCSRQE 173

Query: 70  -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              GC+G   +   +Y  Q  G+++E+ YPYK  N    +C +D S +           +
Sbjct: 174 GNKGCEGGDMDQGFQYIIQNKGIDTEQCYPYKAKN---HRCKFDNSCIGATMSSFTDVTS 230

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           G E  +K+     GP+SV +++        +    N+  CS   L H VL+VGYG   + 
Sbjct: 231 GDEDALKQACANIGPISVGIDASHQSFQFYSSGVYNEFECSSTKLDHGVLVVGYGTYGSK 290

Query: 187 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            YWLV+NSWG +  +EG+  + R  +N CG+   A +  +
Sbjct: 291 DYWLVKNSWGTVWGNEGYIMMSRNKDNQCGVATDASFPVV 330



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V N+  CS   L H VL+VGYG      YWLV+NSWG +  +EG+  + R  +N CG+  
Sbjct: 264  VYNEFECSSTKLDHGVLVVGYGTYGSKDYWLVKNSWGTVWGNEGYIMMSRNKDNQCGVAT 323

Query: 1018 IAGYATI 1024
             A +  +
Sbjct: 324  DASFPVV 330


>gi|428175797|gb|EKX44685.1| hypothetical protein GUITHDRAFT_71985 [Guillardia theta CCMP2712]
          Length = 354

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 160/339 (47%), Gaps = 60/339 (17%)

Query: 655 LETFKAFIVKRGRQYANDEEIKERFEYF---KQDGHKKHERYGTS------EFSDRSPEE 705
           L  F+ +  K  + Y +D     R   F    ++    + R GT+      ++SD     
Sbjct: 30  LREFERWTKKHSKVYEDDTTYLRRLASFCVSLKEVEAINSRPGTTWRAALNQYSD----- 84

Query: 706 ILCKTGFKWSERTYERIVADREKVEKMLMEVEK---DGPVPDAWDWRKK-----NVTGPA 757
                   W E  + +++A++     +   VEK    G V D +DWR +     +     
Sbjct: 85  ------LTWEEFKHAKLMAEQNCSATVTTPVEKLVKMGIVADEFDWRNQTCGETSCVSMV 138

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCDGCFFEPSIEY 815
            +Q  CGSCW FS A  LE  +AIKTG++V  S+ QLV+CA   + +GC+G     + EY
Sbjct: 139 KNQGTCGSCWTFSTAAALESLHAIKTGEMVLLSEQQLVDCAADFKNNGCNGGLPSQAFEY 198

Query: 816 -THQAGLESEKDYPYKNANGE----KFKCAYDK------------SKVKLFTGKDFLHFN 858
             +  GL   ++YPY   +G        CA+D             SKV  FT  D +   
Sbjct: 199 IMYNGGLSKMEEYPYVCGDGHCNVTGGPCAFDPVGKPWSVGAKKVSKVANFTPGDEI--- 255

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQ 914
              +MK ++  + P+SV     +DL H  +G     +  TC  +P  + HAVL VGYG +
Sbjct: 256 ---SMKTVVGSHNPISVAFEVVADLRHYSSGV---YSSPTCVGTPDKVNHAVLAVGYGTE 309

Query: 915 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
             IPYW ++NSWG    D G+FKI+RG+N CGI   A +
Sbjct: 310 GGIPYWTIKNSWGFAWGDNGYFKIQRGSNMCGISVCASF 348



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 161/341 (47%), Gaps = 63/341 (18%)

Query: 289 LETFKAFIVKRGRQYANDEEIKERFEYF---KQDGHKKHERYGTS------EFSDRSPEE 339
           L  F+ +  K  + Y +D     R   F    ++    + R GT+      ++SD     
Sbjct: 30  LREFERWTKKHSKVYEDDTTYLRRLASFCVSLKEVEAINSRPGTTWRAALNQYSD----- 84

Query: 340 ILCKTGFKWSERTYERIVADREKVEKMLMEVEK---DGPVPDAWDWRKK-----NVTGPA 391
                   W E  + +++A++     +   VEK    G V D +DWR +     +     
Sbjct: 85  ------LTWEEFKHAKLMAEQNCSATVTTPVEKLVKMGIVADEFDWRNQTCGETSCVSMV 138

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCGGCDGL-EQPI 448
            +Q  CGSCW FS A  LE  +AIKTG++V  S+ QLV+CA   + +GC G  GL  Q  
Sbjct: 139 KNQGTCGSCWTFSTAAALESLHAIKTGEMVLLSEQQLVDCAADFKNNGCNG--GLPSQAF 196

Query: 449 EY-THQAGLESEKDYPYRNGNGE----KFKCAYDK------------SKVKLFTGKDFLY 491
           EY  +  GL   ++YPY  G+G        CA+D             SKV  FT  D + 
Sbjct: 197 EYIMYNGGLSKMEEYPYVCGDGHCNVTGGPCAFDPVGKPWSVGAKKVSKVANFTPGDEI- 255

Query: 492 FNGSETMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETC--SPYDLGHAVLLVGYG 547
                +MK ++  + P+SV     + L H+ +G     +  TC  +P  + HAVL VGYG
Sbjct: 256 -----SMKTVVGSHNPISVAFEVVADLRHYSSGV---YSSPTCVGTPDKVNHAVLAVGYG 307

Query: 548 KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
            +  IPYW  +NSWG    D G+FKI+RG+N CGI   A +
Sbjct: 308 TEGGIPYWTIKNSWGFAWGDNGYFKIQRGSNMCGISVCASF 348



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 126/244 (51%), Gaps = 37/244 (15%)

Query: 7   KDGPVPDAWDWRKK-----NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           K G V D +DWR +     +      +Q  CGSCW FS A  LE  +AIKTG++V  S+ 
Sbjct: 114 KMGIVADEFDWRNQTCGETSCVSMVKNQGTCGSCWTFSTAAALESLHAIKTGEMVLLSEQ 173

Query: 62  QLVECAK--QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGE----KFKCAYDK-- 112
           QLV+CA   + +GC+G     + EY  +  GL   ++YPY   +G        CA+D   
Sbjct: 174 QLVDCAADFKNNGCNGGLPSQAFEYIMYNGGLSKMEEYPYVCGDGHCNVTGGPCAFDPVG 233

Query: 113 ----------SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIR 160
                     SKV  FT  D +      +MK ++  + P+SV     +DL H  +G    
Sbjct: 234 KPWSVGAKKVSKVANFTPGDEI------SMKTVVGSHNPISVAFEVVADLRHYSSGV--- 284

Query: 161 KNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
            +  TC  +P  + HAVL VGYG +  IPYW ++NSWG    D G+FKI+RG+N CGI  
Sbjct: 285 YSSPTCVGTPDKVNHAVLAVGYGTEGGIPYWTIKNSWGFAWGDNGYFKIQRGSNMCGISV 344

Query: 219 IAGY 222
            A +
Sbjct: 345 CASF 348



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V +  TC  +P  + HAVL VGYG +  IPYW ++NSWG    D G+FKI+RG+N CGI 
Sbjct: 284  VYSSPTCVGTPDKVNHAVLAVGYGTEGGIPYWTIKNSWGFAWGDNGYFKIQRGSNMCGIS 343

Query: 1017 QIAGY 1021
              A +
Sbjct: 344  VCASF 348


>gi|394331824|gb|AFN27131.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 138/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGC       + E+        + +
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDSGCRARLMLQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY ++ G   +C+     V       ++    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSTGYVPECSNSIQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y     R    +C+   L H VLLVGY +   +PYW+++NSWG    + G+ ++  G 
Sbjct: 271 MSYQ----RGVVTSCAGMPLNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 138/304 (45%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGC     + Q  E+        + 
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDSGCRA-RLMLQAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY +  G   +C+     V       ++    SET M   L K GP+S+ +++  
Sbjct: 210 TEDSYPYVSSTGYVPECSNSIQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y     R    +C+   L H VLLVGY +  ++PYW+ +NSWG    + G+ ++  G
Sbjct: 270 FMSYQ----RGVVTSCAGMPLNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWRKK    P  DQ  CGSCWAFS  G +E Q+A+   +L   S+ QLV C  + 
Sbjct: 126 VPDAVDWRKKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC       + E+        + +E  YPY ++ G   +C+     V       ++   
Sbjct: 186 SGCRARLMLQAFEWLLRNMNGTMFTEDSYPYVSSTGYVPECSNSIQLVPGARIDGYMTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y     R    +C+   L H VLLVGY +   +
Sbjct: 246 SSETVMAAWLAKNGPISIAVDASSFMSYQ----RGVVTSCAGMPLNHGVLLVGYNRTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    + G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGENWGENGYVRVTMGVNAC 329



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY +  ++PYW+++NSWG    + G+ ++  G NAC
Sbjct: 280  SCAGMPLNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMGVNAC 329


>gi|394331826|gb|AFN27132.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 142/303 (46%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+    L   S+ QLV C  + +GC G     + E+        + +
Sbjct: 151 WAFSAVGSIESQWALAGHGLTALSEQQLVSCDDKDNGCSGGLMLQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI-LYKYGPLSVLLNSDLI 882
           E  YPY +++G   +C+     V     + ++    SET+K   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSSGYVPECSNSSQLVPGARIEGYMTIESSETVKGAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY +   +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYQSGVL----TSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 142/304 (46%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+    L   S+ QLV C  + +GC G   L Q  E+        + 
Sbjct: 151 WAFSAVGSIESQWALAGHGLTALSEQQLVSCDDKDNGCSGGLML-QAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKI-LYKYGPLSVGLNSHL 516
           +E  YPY + +G   +C+     V     + ++    SET+K   L K GP+S+ +++  
Sbjct: 210 TEDSYPYVSSSGYVPECSNSSQLVPGARIEGYMTIESSETVKGAWLAKNGPISIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY +  ++PYW+ +NSWG    ++G+ ++  G
Sbjct: 270 FMSYQSGVL----TSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 109/208 (52%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWRKK    P  DQ  CGSCWAFS  G +E Q+A+    L   S+ QLV C  + 
Sbjct: 126 VPDAVDWRKKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHGLTALSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +E  YPY +++G   +C+     V     + ++   
Sbjct: 186 NGCSGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIEGYMTIE 245

Query: 128 GSETMKKI-LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET+K   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +
Sbjct: 246 SSETVKGAWLAKNGPISIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNRTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 34/50 (68%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY +  ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|343477207|emb|CCD11901.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 143/317 (45%), Gaps = 22/317 (6%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V    P P   DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVSTGRP-PMTVDWRKKGAVTPVKDQGKC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS---IEYTHQAG 820
            S WAFS  G +EGQ+ I   +L   S+  LV C     GC G F +P+   I ++++  
Sbjct: 148 DSSWAFSAIGNIEGQWKIAGHELTSLSEQMLVSCDTDDFGCRGGFSDPAFKWILWSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           + +E+ YPY +  G    C      V              + + + L + GP+++ +++ 
Sbjct: 208 VFTEQSYPYASGGGNVPTCKMSGKVVGAKISNRLYLPEDEDMITEWLARKGPVAIAVDAT 267

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
               Y G  +     +C   ++ +  LLVGY      PYW+++NSW     +EG+ +IE+
Sbjct: 268 SFQSYTGGVL----TSCISKEMNYGALLVGYDDTSKPPYWIIKNSWSKGWGEEGYIRIEK 323

Query: 941 GNNACGIEQIAGYATID 957
           G N C ++ +   A + 
Sbjct: 324 GTNQCLVKNLPSSAVVS 340



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 27/320 (8%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V    P P   DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVSTGRP-PMTVDWRKKGAVTPVKDQGKC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQP----IEYTHQ 453
            S WAFS  G +EGQ+ I   +L   S+  LV C     GC G  G   P    I ++++
Sbjct: 148 DSSWAFSAIGNIEGQWKIAGHELTSLSEQMLVSCDTDDFGCRG--GFSDPAFKWILWSNK 205

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETM-KKILYKYGPLSVGL 512
             + +E+ YPY +G G    C     KV      + LY    E M  + L + GP+++ +
Sbjct: 206 GNVFTEQSYPYASGGGNVPTCKMS-GKVVGAKISNRLYLPEDEDMITEWLARKGPVAIAV 264

Query: 513 NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           ++     Y G  +     +C   ++ +  LLVGY      PYW+ +NSW     +EG+ +
Sbjct: 265 DATSFQSYTGGVL----TSCISKEMNYGALLVGYDDTSKPPYWIIKNSWSKGWGEEGYIR 320

Query: 573 IERGNNACGIEQIAGYATID 592
           IE+G N C ++ +   A + 
Sbjct: 321 IEKGTNQCLVKNLPSSAVVS 340



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 7/221 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P   DWRKK    P  DQ  C S WAFS  G +EGQ+ I   +L   S+  LV C  
Sbjct: 124 GRPPMTVDWRKKGAVTPVKDQGKCDSSWAFSAIGNIEGQWKIAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPS---IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
              GC G F +P+   I ++++  + +E+ YPY +  G    C      V          
Sbjct: 184 DDFGCRGGFSDPAFKWILWSNKGNVFTEQSYPYASGGGNVPTCKMSGKVVGAKISNRLYL 243

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + + + L + GP+++ +++     Y G  +     +C   ++ +  LLVGY     
Sbjct: 244 PEDEDMITEWLARKGPVAIAVDATSFQSYTGGVL----TSCISKEMNYGALLVGYDDTSK 299

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
            PYW+++NSW     +EG+ +IE+G N C ++ +   A + 
Sbjct: 300 PPYWIIKNSWSKGWGEEGYIRIEKGTNQCLVKNLPSSAVVS 340



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 35/62 (56%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C   ++ +  LLVGY      PYW+++NSW     +EG+ +IE+G N C ++ +   A 
Sbjct: 279  SCISKEMNYGALLVGYDDTSKPPYWIIKNSWSKGWGEEGYIRIEKGTNQCLVKNLPSSAV 338

Query: 1024 ID 1025
            + 
Sbjct: 339  VS 340


>gi|387765908|gb|AFJ95133.1| cathepsin-L [Toxocara canis]
          Length = 360

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 169/335 (50%), Gaps = 27/335 (8%)

Query: 634 VVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQD---GHKK 689
           VVA+  ++  E       E  +L+ F+ FI K  + Y ++EE  ERF  +  +     K 
Sbjct: 25  VVAKNQSVKFEKEYDLTRELRLLDRFEDFIRKYDKVYDSNEEFAERFRIYVNNMLEAQKL 84

Query: 690 HER-------YGTSEFSDRSPEE----ILCKTGFKWSERTYERIVADREKVEKMLMEVEK 738
           ++R       YG +EF+D +  E    +L K  FK   +    I +  +  E ++   E+
Sbjct: 85  NQRNRDYGTIYGENEFADWNVNEFREILLPKDFFKNLRKKATFIDSFIDPPETVMARREE 144

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
              +PD +DWR  NV  P   Q  CGSC AF+  G +E  YA+ TG+L   S+ QL++C 
Sbjct: 145 ---IPDHFDWRPYNVVTPVKSQFKCGSCRAFATGGTVESAYALGTGELRSLSEHQLLDCN 201

Query: 799 KQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
            + + CDG   + ++ Y +  GL  E DYPY     +  +   + +++K      FLH +
Sbjct: 202 LENNACDGGDVDKALRYVYDEGLMREYDYPYVAHRQDTCQLRGETTRIKAAV---FLHQD 258

Query: 859 GSETMKKILYKYGPLSVLLNSDL-IHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQD- 915
            +  +  +L+ YGP++V +N    +  Y G     +   C    +G H++ +VGYG  + 
Sbjct: 259 EASIIDWLLH-YGPVNVGINVTADMKAYKGGVYTPDRWECENKIIGTHSINIVGYGTWNA 317

Query: 916 -NIPYWLVRNSWG-PIGPDEGFFKIERGNNACGIE 948
            N  YW+V+NSWG   G ++G+    RG N+CGIE
Sbjct: 318 TNQKYWIVKNSWGQSYGIEDGYVYFARGINSCGIE 352



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 171/336 (50%), Gaps = 28/336 (8%)

Query: 268 VVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQD---GHKK 323
           VVA+  ++  E       E  +L+ F+ FI K  + Y ++EE  ERF  +  +     K 
Sbjct: 25  VVAKNQSVKFEKEYDLTRELRLLDRFEDFIRKYDKVYDSNEEFAERFRIYVNNMLEAQKL 84

Query: 324 HER-------YGTSEFSDRSPEE----ILCKTGFKWSERTYERIVADREKVEKMLMEVEK 372
           ++R       YG +EF+D +  E    +L K  FK   +    I +  +  E ++   E+
Sbjct: 85  NQRNRDYGTIYGENEFADWNVNEFREILLPKDFFKNLRKKATFIDSFIDPPETVMARREE 144

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
              +PD +DWR  NV  P   Q  CGSC AF+  G +E  YA+ TG+L   S+ QL++C 
Sbjct: 145 ---IPDHFDWRPYNVVTPVKSQFKCGSCRAFATGGTVESAYALGTGELRSLSEHQLLDCN 201

Query: 433 KQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            + + C G D +++ + Y +  GL  E DYPY     +  +   + +++K      FL+ 
Sbjct: 202 LENNACDGGD-VDKALRYVYDEGLMREYDYPYVAHRQDTCQLRGETTRIKAAV---FLHQ 257

Query: 493 NGSETMKKILYKYGPLSVGLN-SHLIHFYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQD 550
           + +  +  +L+ YGP++VG+N +  +  Y G     +   C    +G H++ +VGYG  +
Sbjct: 258 DEASIIDWLLH-YGPVNVGINVTADMKAYKGGVYTPDRWECENKIIGTHSINIVGYGTWN 316

Query: 551 --DIPYWLARNSWG-PIGPDEGFFKIERGNNACGIE 583
             +  YW+ +NSWG   G ++G+    RG N+CGIE
Sbjct: 317 ATNQKYWIVKNSWGQSYGIEDGYVYFARGINSCGIE 352



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR  NV  P   Q  CGSC AF+  G +E  YA+ TG+L   S+ QL++C  + 
Sbjct: 145 IPDHFDWRPYNVVTPVKSQFKCGSCRAFATGGTVESAYALGTGELRSLSEHQLLDCNLEN 204

Query: 71  SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 130
           + CDG   + ++ Y +  GL  E DYPY     +  +   + +++K      FLH + + 
Sbjct: 205 NACDGGDVDKALRYVYDEGLMREYDYPYVAHRQDTCQLRGETTRIKAAV---FLHQDEAS 261

Query: 131 TMKKILYKYGPLSVLLNSDL-IHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQD--NI 186
            +  +L+ YGP++V +N    +  Y G     +   C    +G H++ +VGYG  +  N 
Sbjct: 262 IIDWLLH-YGPVNVGINVTADMKAYKGGVYTPDRWECENKIIGTHSINIVGYGTWNATNQ 320

Query: 187 PYWLVRNSWG-PIGPDEGFFKIERGNNACGIE 217
            YW+V+NSWG   G ++G+    RG N+CGIE
Sbjct: 321 KYWIVKNSWGQSYGIEDGYVYFARGINSCGIE 352



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 3/48 (6%)

Query: 972  HAVLLVGYGKQD--DIPYWLVRNSWG-PIGPDEGFFKIERGNNACGIE 1016
            H++ +VGYG  +  +  YW+V+NSWG   G ++G+    RG N+CGIE
Sbjct: 305  HSINIVGYGTWNATNQKYWIVKNSWGQSYGIEDGYVYFARGINSCGIE 352


>gi|118197532|ref|YP_874244.1| cathepsin [Ectropis obliqua NPV]
 gi|113472527|gb|ABI35734.1| cathepsin [Ectropis obliqua NPV]
          Length = 299

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 155/307 (50%), Gaps = 22/307 (7%)

Query: 661 FIVKRGRQYANDEEIKERFEYFK---QDGHKKHERYGTS-----EFSDRSPEEILCK-TG 711
           F+    + Y +D E  +R+  F+   +D + K++  G++     +FSD S  EI+ K TG
Sbjct: 2   FVANYNKMYDDDLEKTKRYSIFRDNLRDINIKNKLNGSAVYRINKFSDLSTSEIVLKYTG 61

Query: 712 FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSI 771
              S    ER+  +     K ++  +  G  P  +DWR +N      +Q  CG+CWAF+ 
Sbjct: 62  L--SVPPTERLTTN---FCKTIVLDQPPGKGPLNFDWRHQNKVTSIKNQGVCGACWAFAT 116

Query: 772 AGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYK 830
              +E QYAIK    +  S+ Q+++C     GCDG     + E      G++ E +YPY+
Sbjct: 117 LASIESQYAIKHNVQINLSEQQMIDCDYVDMGCDGGLLHTAFEQMIEMGGVKHEHEYPYE 176

Query: 831 NANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPI 890
             N    +   D   VK+     ++     E +K +L   GP+ + +++  I +Y    I
Sbjct: 177 GIN-MNCRLNDDNFAVKIIGCYRYIVLQ-EEKLKDLLRAVGPIPIAIDASGIANYYQGVI 234

Query: 891 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI-EQ 949
                 C  + L HAVLLVGYG ++NIPYW ++N+WG    + G+F++ +  NACG+  +
Sbjct: 235 ----NYCENHGLNHAVLLVGYGVENNIPYWTIKNTWGEDWGENGYFRVRQNINACGMTNE 290

Query: 950 IAGYATI 956
           +A  A +
Sbjct: 291 LASSAVL 297



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 155/313 (49%), Gaps = 33/313 (10%)

Query: 295 FIVKRGRQYANDEEIKERFEYFK---QDGHKKHERYGTS-----EFSDRSPEEILCK-TG 345
           F+    + Y +D E  +R+  F+   +D + K++  G++     +FSD S  EI+ K TG
Sbjct: 2   FVANYNKMYDDDLEKTKRYSIFRDNLRDINIKNKLNGSAVYRINKFSDLSTSEIVLKYTG 61

Query: 346 FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSI 405
              S    ER+  +     K ++  +  G  P  +DWR +N      +Q  CG+CWAF+ 
Sbjct: 62  L--SVPPTERLTTN---FCKTIVLDQPPGKGPLNFDWRHQNKVTSIKNQGVCGACWAFAT 116

Query: 406 AGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG---CDGLEQPIEYTHQAGLESEKDY 462
              +E QYAIK    +  S+ Q+++C     GC G       EQ IE     G++ E +Y
Sbjct: 117 LASIESQYAIKHNVQINLSEQQMIDCDYVDMGCDGGLLHTAFEQMIE---MGGVKHEHEY 173

Query: 463 PYRNGNGEKFKCAY--DKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN-SHLIHF 519
           PY    G    C    D   VK+     ++     E +K +L   GP+ + ++ S + ++
Sbjct: 174 PYE---GINMNCRLNDDNFAVKIIGCYRYIVLQ-EEKLKDLLRAVGPIPIAIDASGIANY 229

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
           Y G         C  + L HAVLLVGYG +++IPYW  +N+WG    + G+F++ +  NA
Sbjct: 230 YQGVI-----NYCENHGLNHAVLLVGYGVENNIPYWTIKNTWGEDWGENGYFRVRQNINA 284

Query: 580 CGI-EQIAGYATI 591
           CG+  ++A  A +
Sbjct: 285 CGMTNELASSAVL 297



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 8/219 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR +N      +Q  CG+CWAF+    +E QYAIK    +  S+ Q+++C  
Sbjct: 85  GKGPLNFDWRHQNKVTSIKNQGVCGACWAFATLASIESQYAIKHNVQINLSEQQMIDCDY 144

Query: 69  QCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              GCDG     + E      G++ E +YPY+  N    +   D   VK+     ++   
Sbjct: 145 VDMGCDGGLLHTAFEQMIEMGGVKHEHEYPYEGIN-MNCRLNDDNFAVKIIGCYRYIVLQ 203

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E +K +L   GP+ + +++  I +Y    I      C  + L HAVLLVGYG ++NIP
Sbjct: 204 -EEKLKDLLRAVGPIPIAIDASGIANYYQGVI----NYCENHGLNHAVLLVGYGVENNIP 258

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYATI 225
           YW ++N+WG    + G+F++ +  NACG+  ++A  A +
Sbjct: 259 YWTIKNTWGEDWGENGYFRVRQNINACGMTNELASSAVL 297



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYAT 1023
            C  + L HAVLLVGYG +++IPYW ++N+WG    + G+F++ +  NACG+  ++A  A 
Sbjct: 237  CENHGLNHAVLLVGYGVENNIPYWTIKNTWGEDWGENGYFRVRQNINACGMTNELASSAV 296

Query: 1024 I 1024
            +
Sbjct: 297  L 297


>gi|28974202|gb|AAO61485.1| cathepsin H [Sterkiella histriomuscorum]
          Length = 366

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 131/277 (47%), Gaps = 23/277 (8%)

Query: 685 DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE-KVEKMLMEVEKDGPVP 743
           DG   +++ G + FSD + EE             Y  I A++             +  +P
Sbjct: 88  DGTNTYKK-GLNAFSDMTDEEFF----------DYYNIKAEQNCSATNRKSFGNSNANIP 136

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK--QC 801
             WDWR   V  P  +Q  CGSCW FS  G +E  Y +K G     S+ QLV+CA     
Sbjct: 137 TEWDWRTFGVVSPVKNQGKCGSCWTFSTVGCVESHYLLKYGAFRNLSEQQLVDCAGDYDN 196

Query: 802 SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSK--VKLFTGKDFLHFN 858
            GC G     + EY     GL  E  YPYK ANG+   C+  K +  V +  G   +  N
Sbjct: 197 HGCSGGLPSHAFEYIKDNGGLALETTYPYKAANGQ---CSIQKGQQSVGIRGGAVNISLN 253

Query: 859 GSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN- 916
             + +K+ +Y +GP+SV     D   DY             P D+ HAVL VG+G  +N 
Sbjct: 254 -EDDLKQAIYLHGPVSVAFRVIDGFRDYKSGVYAVEGCANGPNDVNHAVLAVGFGTDENK 312

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
           + YW+++NSWG    D+GFFK++RG N CGI+    Y
Sbjct: 313 VDYWIIKNSWGAAWGDQGFFKMKRGVNMCGIQNCNSY 349



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 113/222 (50%), Gaps = 11/222 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +  +P  WDWR   V  P  +Q  CGSCW FS  G +E  Y +K G     S+ QLV+CA
Sbjct: 132 NANIPTEWDWRTFGVVSPVKNQGKCGSCWTFSTVGCVESHYLLKYGAFRNLSEQQLVDCA 191

Query: 68  K--QCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSK--VKLFTGKD 122
                 GC G     + EY     GL  E  YPYK ANG+   C+  K +  V +  G  
Sbjct: 192 GDYDNHGCSGGLPSHAFEYIKDNGGLALETTYPYKAANGQ---CSIQKGQQSVGIRGGAV 248

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
            +  N  + +K+ +Y +GP+SV     D   DY             P D+ HAVL VG+G
Sbjct: 249 NISLN-EDDLKQAIYLHGPVSVAFRVIDGFRDYKSGVYAVEGCANGPNDVNHAVLAVGFG 307

Query: 182 KQDN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
             +N + YW+++NSWG    D+GFFK++RG N CGI+    Y
Sbjct: 308 TDENKVDYWIIKNSWGAAWGDQGFFKMKRGVNMCGIQNCNSY 349



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 131/278 (47%), Gaps = 24/278 (8%)

Query: 319 DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE-KVEKMLMEVEKDGPVP 377
           DG   +++ G + FSD + EE             Y  I A++             +  +P
Sbjct: 88  DGTNTYKK-GLNAFSDMTDEEFF----------DYYNIKAEQNCSATNRKSFGNSNANIP 136

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             WDWR   V  P  +Q  CGSCW FS  G +E  Y +K G     S+ QLV+CA     
Sbjct: 137 TEWDWRTFGVVSPVKNQGKCGSCWTFSTVGCVESHYLLKYGAFRNLSEQQLVDCAGDYDN 196

Query: 438 CGGCDGL-EQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSK--VKLFTGKDFLYFN 493
            G   GL     EY     GL  E  YPY+  NG+   C+  K +  V +  G   +  N
Sbjct: 197 HGCSGGLPSHAFEYIKDNGGLALETTYPYKAANGQ---CSIQKGQQSVGIRGGAVNISLN 253

Query: 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCS--PYDLGHAVLLVGYGKQDD 551
             + +K+ +Y +GP+SV     +  F +        E C+  P D+ HAVL VG+G  ++
Sbjct: 254 -EDDLKQAIYLHGPVSVAFRV-IDGFRDYKSGVYAVEGCANGPNDVNHAVLAVGFGTDEN 311

Query: 552 -IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
            + YW+ +NSWG    D+GFFK++RG N CGI+    Y
Sbjct: 312 KVDYWIIKNSWGAAWGDQGFFKMKRGVNMCGIQNCNSY 349


>gi|56758920|gb|AAW27600.1| SJCHGC00098 protein [Schistosoma japonicum]
 gi|226476138|emb|CAX72159.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 159/321 (49%), Gaps = 35/321 (10%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGEIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + ++  +         E+E  + PVP  WDWR          Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKHQGL 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC+G + + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCEGGYMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLS---VL 876
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+S   V 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 877 LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFF 936
           LNS ++  Y       ND  C   D+ HAVL+VGYGK+    YWL++NSWG +   +G+F
Sbjct: 254 LNSLIM--YKSGVFESND--CKYADINHAVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYF 309

Query: 937 KIERG-NNACGIEQIAGYATI 956
           K+ R  +N CG+   A +  +
Sbjct: 310 KLRRNKHNMCGVASNASFPLL 330



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 161/322 (50%), Gaps = 36/322 (11%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGEIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + ++  +         E+E  + PVP  WDWR          Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKHQGL 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+    G  GC+G  ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP-YGNYGCEGGYMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVG-- 511
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG  
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 512 -LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGF 570
            LNS LI + +G     ND  C   D+ HAVL+VGYGK+    YWL +NSWG +   +G+
Sbjct: 253 ALNS-LIMYKSGV-FESND--CKYADINHAVLVVGYGKEHGKDYWLIKNSWGDLWGSKGY 308

Query: 571 FKIERG-NNACGIEQIAGYATI 591
           FK+ R  +N CG+   A +  +
Sbjct: 309 FKLRRNKHNMCGVASNASFPLL 330



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 118/223 (52%), Gaps = 14/223 (6%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR          Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSTWDWRDHGAVTAVKHQGLCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLS---VLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
              +T++K +Y+YGP+S   V LNS ++  Y       ND  C   D+ HAVL+VGYGK+
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVALNSLIM--YKSGVFESND--CKYADINHAVLVVGYGKE 287

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
               YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 288 HGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ HAVL+VGYGK+    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKYADINHAVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|56754277|gb|AAW25326.1| unknown [Schistosoma japonicum]
          Length = 342

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 157/319 (49%), Gaps = 31/319 (9%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 36  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 95

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 96  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGM 147

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC G F + +  Y     
Sbjct: 148 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGGGFMDHAFNYLESHY 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSV-LLN 878
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SV ++ 
Sbjct: 208 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 264

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            D +  Y       ND  C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+
Sbjct: 265 LDSLTMYKSGVFESND--CKYADINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKL 322

Query: 939 ERG-NNACGIEQIAGYATI 956
            R  +N CG+   A +  +
Sbjct: 323 RRNKHNMCGVASNASFPLL 341



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR         +Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 126 PVPSTWDWRDHGAVTAVKNQGMCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 185

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 186 YGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 242

Query: 127 NGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYGK+  
Sbjct: 243 KDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESND--CKYADINHGVLVVGYGKEHG 300

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 301 KDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 341



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 156/320 (48%), Gaps = 32/320 (10%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 36  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 95

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 96  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGM 147

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGGCDGLEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GCGG   ++    Y    
Sbjct: 148 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGG-GFMDHAFNYLESH 206

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN 513
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG+ 
Sbjct: 207 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 263

Query: 514 S-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +   +  Y       ND  C   D+ H VL+VGYGK+    YWL +NSWG +   +G+FK
Sbjct: 264 ALDSLTMYKSGVFESND--CKYADINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFK 321

Query: 573 IERG-NNACGIEQIAGYATI 591
           + R  +N CG+   A +  +
Sbjct: 322 LRRNKHNMCGVASNASFPLL 341



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 281  CKYADINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 340

Query: 1024 I 1024
            +
Sbjct: 341  L 341


>gi|114559412|ref|XP_001171151.1| PREDICTED: cathepsin K isoform 4 [Pan troglodytes]
 gi|410221358|gb|JAA07898.1| cathepsin K [Pan troglodytes]
 gi|410248298|gb|JAA12116.1| cathepsin K [Pan troglodytes]
 gi|410301088|gb|JAA29144.1| cathepsin K [Pan troglodytes]
 gi|410351445|gb|JAA42326.1| cathepsin K [Pan troglodytes]
          Length = 329

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 155/328 (47%), Gaps = 28/328 (8%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 695
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 696 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
              +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 812 SIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYK 869
           + EY  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + +
Sbjct: 185 AFEYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 241

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG  
Sbjct: 242 VGPVSVAIDASLTSFQFYSRGVYFDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGEN 301

Query: 930 GPDEGFFKIERG-NNACGIEQIAGYATI 956
             ++G+  + R  NNACGI  +A +  +
Sbjct: 302 WGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + EY  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFEYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q  
Sbjct: 229 EGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVYFDESCNSDNLNHAVLAVGYGIQKG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 329
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 330 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
              +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   + 
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMT 183

Query: 446 QPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILY 503
              EY  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + 
Sbjct: 184 NAFEYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVA 240

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
           + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG 
Sbjct: 241 RVGPVSVAIDASLTSFQFYSRGVYFDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGE 300

Query: 564 IGPDEGFFKIERG-NNACGIEQIAGYATI 591
              ++G+  + R  NNACGI  +A +  +
Sbjct: 301 NWGNKGYILMARNKNNACGIANLASFPKM 329



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|115457680|ref|NP_001052440.1| Os04g0311400 [Oryza sativa Japonica Group]
 gi|113564011|dbj|BAF14354.1| Os04g0311400, partial [Oryza sativa Japonica Group]
          Length = 384

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 132/248 (53%), Gaps = 37/248 (14%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +PD +DWR+    GP  DQ +CGSCW+FS +G LEG + + TGKL   S+ Q+V+C  +C
Sbjct: 148 LPDDFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHEC 207

Query: 802 ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 851
                    SGC+G     +  Y  ++ GL+SEKDYPY    G +  C +DKSK+ +   
Sbjct: 208 DASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYA---GRENTCKFDKSKI-VAQV 263

Query: 852 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 906
           K+F   + +E  +   L K+GPL++ +N+  +  Y G           P+     L H V
Sbjct: 264 KNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIGG-------VSCPFICGRHLDHGV 316

Query: 907 LLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT- 955
           LLVGYG            PYW+++NSWG    ++G++KI RG    N CG++ +    T 
Sbjct: 317 LLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTA 376

Query: 956 IDVVKNDE 963
           I   K +E
Sbjct: 377 IHTSKKEE 384



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 127/239 (53%), Gaps = 36/239 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD +DWR+    GP  DQ  CGSCW+FS +G LEG + + TGKL   S+ Q+V+C  +C
Sbjct: 148 LPDDFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHEC 207

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     +  Y  ++ GL+SEKDYPY    G +  C +DKSK+ +   
Sbjct: 208 DASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYA---GRENTCKFDKSKI-VAQV 263

Query: 121 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 175
           K+F   + +E  +   L K+GPL++ +N+  +  Y G           P+     L H V
Sbjct: 264 KNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIGG-------VSCPFICGRHLDHGV 316

Query: 176 LLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 224
           LLVGYG            PYW+++NSWG    ++G++KI RG    N CG++ +    T
Sbjct: 317 LLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVT 375



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 126/239 (52%), Gaps = 35/239 (14%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +PD +DWR+    GP  DQ +CGSCW+FS +G LEG + + TGKL   S+ Q+V+C  +C
Sbjct: 148 LPDDFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHEC 207

Query: 436 SGC------GGCDGLEQPIEYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTG 486
                     GC+G      +++     GL+SEKDYPY    G +  C +DKSK+ +   
Sbjct: 208 DASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPY---AGRENTCKFDKSKI-VAQV 263

Query: 487 KDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAV 541
           K+F   + +E  +   L K+GPL++ +N+  +  Y G           P+     L H V
Sbjct: 264 KNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIGG-------VSCPFICGRHLDHGV 316

Query: 542 LLVGYGKQ-------DDIPYWLARNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 590
           LLVGYG          + PYW+ +NSWG    ++G++KI RG    N CG++ +    T
Sbjct: 317 LLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVT 375



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 10/64 (15%)

Query: 970  LGHAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIA 1019
            L H VLLVGYG          + PYW+++NSWG    ++G++KI RG    N CG++ + 
Sbjct: 312  LDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMV 371

Query: 1020 GYAT 1023
               T
Sbjct: 372  SSVT 375


>gi|403302736|ref|XP_003942009.1| PREDICTED: cathepsin K isoform 2 [Saimiri boliviensis boliviensis]
          Length = 383

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 166 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 225

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 226 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 282

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q  
Sbjct: 283 EGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG 342

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 343 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 383



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 166 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 225

Query: 799 KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 856
            +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 226 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 282

Query: 857 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q  
Sbjct: 283 EGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG 342

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 343 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 383



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 121/222 (54%), Gaps = 7/222 (3%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 166 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 225

Query: 433 KQCSGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFL 490
            +  GCGG   +    +Y  +  G++SE  YPY    G++  C Y+ + K     G   +
Sbjct: 226 SENDGCGG-GYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREI 281

Query: 491 YFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                + +K+ + + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q 
Sbjct: 282 PEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQK 341

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
              +W+ +NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 342 GNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 383



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 320  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 379

Query: 1021 YATI 1024
            +  +
Sbjct: 380  FPKM 383


>gi|351721011|ref|NP_001238219.1| P34 probable thiol protease precursor [Glycine max]
 gi|1199563|gb|AAB09252.1| 34 kDa maturing seed vacuolar thiol protease precursor [Glycine
           max]
          Length = 379

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 160/323 (49%), Gaps = 34/323 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGH-----------KKHERYGTSEFSDRSPEEI 340
           F+ +  + GR Y N EE  +R E FK + +               R G ++F+D +P+E 
Sbjct: 44  FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQE- 102

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
             K   +  +   ++I    +K++K   +   D P P +WDWRKK V      Q  CG  
Sbjct: 103 FSKKYLQAPKDVSQQIKMANKKMKKE--QYSCDHP-PASWDWRKKGVITQVKYQGGCGRG 159

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE-QPIEYT-HQAGLES 458
           WAFS  G +E  +AI TG LV  S+ +LV+C ++  G    +G + Q  E+     G+ +
Sbjct: 160 WAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESEGS--YNGWQYQSFEWVLEHGGIAT 217

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNG----SETMKKILYKY--GPLSVG 511
           + DYPYR   G   +C  +K + K+   G + L  +     SET +  L      P+SV 
Sbjct: 218 DDDYPYRAKEG---RCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVS 274

Query: 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           +++   H Y G  I   +   SPY + H VLLVGYG  D + YW+A+NSWG    ++G+ 
Sbjct: 275 IDAKDFHLYTGG-IYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGEDWGEDGYI 333

Query: 572 KIER--GN--NACGIEQIAGYAT 590
            I+R  GN    CG+   A Y T
Sbjct: 334 WIQRNTGNLLGVCGMNYFASYPT 356



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 157/321 (48%), Gaps = 31/321 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGH-----------KKHERYGTSEFSDRSPEEI 706
           F+ +  + GR Y N EE  +R E FK + +               R G ++F+D +P+E 
Sbjct: 44  FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQE- 102

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
             K   +  +   ++I    +K++K   +   D P P +WDWRKK V      Q  CG  
Sbjct: 103 FSKKYLQAPKDVSQQIKMANKKMKKE--QYSCDHP-PASWDWRKKGVITQVKYQGGCGRG 159

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEK 825
           WAFS  G +E  +AI TG LV  S+ +LV+C ++  G    +   S E+     G+ ++ 
Sbjct: 160 WAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESEGSYNGWQYQSFEWVLEHGGIATDD 219

Query: 826 DYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG----SETMKKILYKY--GPLSVLLN 878
           DYPY+   G   +C  +K + K+   G + L  +     SET +  L      P+SV ++
Sbjct: 220 DYPYRAKEG---RCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVSID 276

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +   H Y G  I   +   SPY + H VLLVGYG  D + YW+ +NSWG    ++G+  I
Sbjct: 277 AKDFHLYTGG-IYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGEDWGEDGYIWI 335

Query: 939 ER--GN--NACGIEQIAGYAT 955
           +R  GN    CG+   A Y T
Sbjct: 336 QRNTGNLLGVCGMNYFASYPT 356



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 117/229 (51%), Gaps = 17/229 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D P P +WDWRKK V      Q  CG  WAFS  G +E  +AI TG LV  S+ +LV+C 
Sbjct: 133 DHP-PASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCV 191

Query: 68  KQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLH 125
           ++  G    +   S E+     G+ ++ DYPY+   G   +C  +K + K+   G + L 
Sbjct: 192 EESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEG---RCKANKIQDKVTIDGYETLI 248

Query: 126 FNG----SETMKKILYKY--GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
            +     SET +  L      P+SV +++   H Y G  I   +   SPY + H VLLVG
Sbjct: 249 MSDESTESETEQAFLSAILEQPISVSIDAKDFHLYTGG-IYDGENCTSPYGINHFVLLVG 307

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIER--GN--NACGIEQIAGYAT 224
           YG  D + YW+ +NSWG    ++G+  I+R  GN    CG+   A Y T
Sbjct: 308 YGSADGVDYWIAKNSWGEDWGEDGYIWIQRNTGNLLGVCGMNYFASYPT 356



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 5/70 (7%)

Query: 959  VKNDETC-SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER--GN--NAC 1013
            + + E C SPY + H VLLVGYG  D + YW+ +NSWG    ++G+  I+R  GN    C
Sbjct: 287  IYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGEDWGEDGYIWIQRNTGNLLGVC 346

Query: 1014 GIEQIAGYAT 1023
            G+   A Y T
Sbjct: 347  GMNYFASYPT 356


>gi|157862757|gb|ABV90501.1| cathepsin L, partial [Fasciola gigantica]
          Length = 244

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           + D  VPD  DWR         DQ DCGSCWAFS  G +EGQ+    G  V FS+ QLV+
Sbjct: 21  KNDRDVPDRIDWRDSGYVTKVKDQEDCGSCWAFSTTGTMEGQFMKNIGFNVSFSEQQLVD 80

Query: 66  CAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKD 122
           C+     +GC G   E + EY  + GLE E  YPY+   G    C YD+   V   TG  
Sbjct: 81  CSSDFGNNGCRGGLMEIAYEYLRRFGLEIESTYPYRAVEG---PCRYDRRLGVAKVTGYY 137

Query: 123 FLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
            +H      ++ ++   GP +V L+  SD +   +G       +TCSP  L H VL VGY
Sbjct: 138 IVHSGDEVELQNLVGIEGPAAVALDVESDFVMYRSGI---YQSQTCSPDRLNHGVLAVGY 194

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
           G Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 195 GTQSGTDYWIVKNSWGTWWGEGGYIRMVRNRGNMCGIASMA 235



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 112/221 (50%), Gaps = 12/221 (5%)

Query: 737 EKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 796
           + D  VPD  DWR         DQ  CGSCWAFS  G +EGQ+    G  V FS+ QLV+
Sbjct: 21  KNDRDVPDRIDWRDSGYVTKVKDQEDCGSCWAFSTTGTMEGQFMKNIGFNVSFSEQQLVD 80

Query: 797 CAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKD 853
           C+     +GC G   E + EY  + GLE E  YPY+   G    C YD+   V   TG  
Sbjct: 81  CSSDFGNNGCRGGLMEIAYEYLRRFGLEIESTYPYRAVEG---PCRYDRRLGVAKVTGYY 137

Query: 854 FLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 911
            +H      ++ ++   GP +V L+  SD +   +G       +TCSP  L H VL VGY
Sbjct: 138 IVHSGDEVELQNLVGIEGPAAVALDVESDFVMYRSGI---YQSQTCSPDRLNHGVLAVGY 194

Query: 912 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
           G Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 195 GTQSGTDYWIVKNSWGTWWGEGGYIRMVRNRGNMCGIASMA 235



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 111/222 (50%), Gaps = 13/222 (5%)

Query: 371 EKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 430
           + D  VPD  DWR         DQ  CGSCWAFS  G +EGQ+    G  V FS+ QLV+
Sbjct: 21  KNDRDVPDRIDWRDSGYVTKVKDQEDCGSCWAFSTTGTMEGQFMKNIGFNVSFSEQQLVD 80

Query: 431 CAKQCSGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGK 487
           C+    G  GC G  +E   EY  + GLE E  YPYR   G    C YD+   V   TG 
Sbjct: 81  CSSDF-GNNGCRGGLMEIAYEYLRRFGLEIESTYPYRAVEG---PCRYDRRLGVAKVTGY 136

Query: 488 DFLYFNGSETMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVG 545
             ++      ++ ++   GP +V L+  S  + + +G       +TCSP  L H VL VG
Sbjct: 137 YIVHSGDEVELQNLVGIEGPAAVALDVESDFVMYRSGI---YQSQTCSPDRLNHGVLAVG 193

Query: 546 YGKQDDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
           YG Q    YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 194 YGTQSGTDYWIVKNSWGTWWGEGGYIRMVRNRGNMCGIASMA 235



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 17/102 (16%)

Query: 934  GFFKIERGN-----NACGIEQIAGYATIDV----------VKNDETCSPYDLGHAVLLVG 978
            G++ +  G+     N  GIE  A  A +DV          +   +TCSP  L H VL VG
Sbjct: 135  GYYIVHSGDEVELQNLVGIEGPAAVA-LDVESDFVMYRSGIYQSQTCSPDRLNHGVLAVG 193

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 1019
            YG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 194  YGTQSGTDYWIVKNSWGTWWGEGGYIRMVRNRGNMCGIASMA 235


>gi|111036374|dbj|BAF02516.1| cathepsin L-like proteinase [Echinococcus multilocularis]
          Length = 338

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 120/225 (53%), Gaps = 18/225 (8%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD+ DWRKK +  P  DQ DCGSCWAFS  G LEGQ   KTGKL+  S+ QLV+C+   
Sbjct: 122 VPDSIDWRKKGLVTPIKDQGDCGSCWAFSATGALEGQLKRKTGKLISLSEQQLVDCSTYT 181

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-- 126
              GC+G     +  Y  + G ESE DYPY   +G   KC ++ SKV     K F+    
Sbjct: 182 GNEGCNGGDMNDAFRYWMRNGAESESDYPYTAMDG---KCKFNSSKVVTKVSK-FVKVPK 237

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETCSPYDLGHAVLLVGY-G 181
              + +K  + + GP+SV +++      +G  + K     D TCS   L HAVL+VGY  
Sbjct: 238 KREDQLKLSVAQVGPVSVAIDA----TSSGFMLYKKGIYQDNTCSQQYLDHAVLVVGYDA 293

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
            +    YW+V+NSWG      G+  + R   N CGI  +A Y  I
Sbjct: 294 DKTRQKYWIVKNSWGEDWGQRGYIWMARDKGNMCGIATMASYPLI 338



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 119/225 (52%), Gaps = 18/225 (8%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD+ DWRKK +  P  DQ  CGSCWAFS  G LEGQ   KTGKL+  S+ QLV+C+   
Sbjct: 122 VPDSIDWRKKGLVTPIKDQGDCGSCWAFSATGALEGQLKRKTGKLISLSEQQLVDCSTYT 181

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-- 857
              GC+G     +  Y  + G ESE DYPY   +G   KC ++ SKV     K F+    
Sbjct: 182 GNEGCNGGDMNDAFRYWMRNGAESESDYPYTAMDG---KCKFNSSKVVTKVSK-FVKVPK 237

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETCSPYDLGHAVLLVGY-G 912
              + +K  + + GP+SV +++      +G  + K     D TCS   L HAVL+VGY  
Sbjct: 238 KREDQLKLSVAQVGPVSVAIDA----TSSGFMLYKKGIYQDNTCSQQYLDHAVLVVGYDA 293

Query: 913 KQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
            +    YW+V+NSWG      G+  + R   N CGI  +A Y  I
Sbjct: 294 DKTRQKYWIVKNSWGEDWGQRGYIWMARDKGNMCGIATMASYPLI 338



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 115/221 (52%), Gaps = 9/221 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD+ DWRKK +  P  DQ  CGSCWAFS  G LEGQ   KTGKL+  S+ QLV+C+   
Sbjct: 122 VPDSIDWRKKGLVTPIKDQGDCGSCWAFSATGALEGQLKRKTGKLISLSEQQLVDCSTY- 180

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN 493
           +G  GC+G  +     Y  + G ESE DYPY   +G   KC ++ SKV     K      
Sbjct: 181 TGNEGCNGGDMNDAFRYWMRNGAESESDYPYTAMDG---KCKFNSSKVVTKVSKFVKVPK 237

Query: 494 GSETMKKI-LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGY-GKQDD 551
             E   K+ + + GP+SV +++    F         D TCS   L HAVL+VGY   +  
Sbjct: 238 KREDQLKLSVAQVGPVSVAIDATSSGFMLYKKGIYQDNTCSQQYLDHAVLVVGYDADKTR 297

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
             YW+ +NSWG      G+  + R   N CGI  +A Y  I
Sbjct: 298 QKYWIVKNSWGEDWGQRGYIWMARDKGNMCGIATMASYPLI 338


>gi|260830531|ref|XP_002610214.1| hypothetical protein BRAFLDRAFT_216923 [Branchiostoma floridae]
 gi|229295578|gb|EEN66224.1| hypothetical protein BRAFLDRAFT_216923 [Branchiostoma floridae]
          Length = 274

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 16/274 (5%)

Query: 318 QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
           QD  +   +YG ++F D + EE           R Y      +   + +          P
Sbjct: 16  QDSERGTAKYGVTKFMDLTEEEF----------RRYYLTPVWKAPAKPLPPATIPKKDAP 65

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
            A+DWR         DQ  CGSCWAFS  G +EGQ+AIK G L + S+ Q     + C  
Sbjct: 66  TAFDWRDHGAVTEVKDQGQCGSCWAFSTTGNIEGQWAIKKGNLPDLSE-QHTSKIESCHI 124

Query: 438 CGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET 497
                  ++ I+   ++GLESEK YPY     +  +C  D SKV+++             
Sbjct: 125 NPIVKRTKRSID--GKSGLESEKAYPYE---AKDEQCHMDYSKVQVYINSSVNISKDEND 179

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLA 557
           M   L + GP+S+G+N+  + FY G         C+P +L H VL+VGYG +D+ PYW+ 
Sbjct: 180 MASWLAENGPISIGINAFPMQFYMGGISHPWRIFCNPEELDHGVLIVGYGTKDETPYWII 239

Query: 558 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           +NSWG    +EG++ + RG   CG+  +   + +
Sbjct: 240 KNSWGKNWGEEGYYLVYRGGGVCGLNTMCTSSVV 273



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 25/278 (8%)

Query: 684 QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
           QD  +   +YG ++F D + EE           R Y      +   + +          P
Sbjct: 16  QDSERGTAKYGVTKFMDLTEEEF----------RRYYLTPVWKAPAKPLPPATIPKKDAP 65

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
            A+DWR         DQ  CGSCWAFS  G +EGQ+AIK G L + S+       +  S 
Sbjct: 66  TAFDWRDHGAVTEVKDQGQCGSCWAFSTTGNIEGQWAIKKGNLPDLSE-------QHTSK 118

Query: 804 CDGCFFEPSIEYTHQA-----GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
            + C   P ++ T ++     GLESEK YPY+  + +   C  D SKV+++         
Sbjct: 119 IESCHINPIVKRTKRSIDGKSGLESEKAYPYEAKDEQ---CHMDYSKVQVYINSSVNISK 175

Query: 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
               M   L + GP+S+ +N+  +  Y G         C+P +L H VL+VGYG +D  P
Sbjct: 176 DENDMASWLAENGPISIGINAFPMQFYMGGISHPWRIFCNPEELDHGVLIVGYGTKDETP 235

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           YW+++NSWG    +EG++ + RG   CG+  +   + +
Sbjct: 236 YWIIKNSWGKNWGEEGYYLVYRGGGVCGLNTMCTSSVV 273



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 113/220 (51%), Gaps = 15/220 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P A+DWR         DQ  CGSCWAFS  G +EGQ+AIK G L + S+       +  
Sbjct: 64  APTAFDWRDHGAVTEVKDQGQCGSCWAFSTTGNIEGQWAIKKGNLPDLSE-------QHT 116

Query: 71  SGCDGCFFEPSIEYTHQA-----GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
           S  + C   P ++ T ++     GLESEK YPY+  + +   C  D SKV+++       
Sbjct: 117 SKIESCHINPIVKRTKRSIDGKSGLESEKAYPYEAKDEQ---CHMDYSKVQVYINSSVNI 173

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
                 M   L + GP+S+ +N+  +  Y G         C+P +L H VL+VGYG +D 
Sbjct: 174 SKDENDMASWLAENGPISIGINAFPMQFYMGGISHPWRIFCNPEELDHGVLIVGYGTKDE 233

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYW+++NSWG    +EG++ + RG   CG+  +   + +
Sbjct: 234 TPYWIIKNSWGKNWGEEGYYLVYRGGGVCGLNTMCTSSVV 273



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 40/60 (66%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C+P +L H VL+VGYG +D+ PYW+++NSWG    +EG++ + RG   CG+  +   + +
Sbjct: 214  CNPEELDHGVLIVGYGTKDETPYWIIKNSWGKNWGEEGYYLVYRGGGVCGLNTMCTSSVV 273


>gi|158148921|dbj|BAF81994.1| cysteine proteinase [Platycodon grandiflorus]
          Length = 359

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 146/316 (46%), Gaps = 32/316 (10%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERY--GTSEFSDRSPEEILC 708
            F  F  + G+ Y   EE+K RF  F       +  +KK   Y  G +EF+D        
Sbjct: 59  AFARFAHRYGKSYETAEEMKRRFSIFVDSLKMIRSHNKKGLSYTLGVNEFAD-------- 110

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 766
                W E    R+ A  +     L    K  +G +P   DWR+  +  P  +Q  CGSC
Sbjct: 111 ---LTWEEFRKHRLGA-AQNCSATLKGNHKLTNGLLPLKKDWREVGIVTPVKNQGHCGSC 166

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLES 823
           W FS  G LE  Y    GK +  S+ QLV+CA+  +  GC+G     + EY     GL++
Sbjct: 167 WTFSTTGALEAAYVQAFGKAIFLSEQQLVDCARAYNNFGCNGGLPSQAFEYIKANGGLDT 226

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSDLI 882
           E+ YPY   +G    C +    + +       +     + +K  +    P+SV       
Sbjct: 227 EEAYPYTGVDG---VCKFSSENIGVQVLDSVNITLGAEDELKDAVAFVRPVSVAFEVVSG 283

Query: 883 HDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
                + +  +D TC  +P D+ HAV+ VGYG ++++PYWL++NSWG    D G+FK+E 
Sbjct: 284 FRLYKSGVYTSD-TCGNTPMDVNHAVVAVGYGVENDVPYWLIKNSWGADWGDNGYFKMEM 342

Query: 941 GNNACGIEQIAGYATI 956
           G N CG+   A Y  +
Sbjct: 343 GKNMCGVATCASYPVV 358



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 147/320 (45%), Gaps = 39/320 (12%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERY--GTSEFSDRSPEEILC 342
            F  F  + G+ Y   EE+K RF  F       +  +KK   Y  G +EF+D        
Sbjct: 59  AFARFAHRYGKSYETAEEMKRRFSIFVDSLKMIRSHNKKGLSYTLGVNEFAD-------- 110

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 400
                W E    R+ A  +     L    K  +G +P   DWR+  +  P  +Q  CGSC
Sbjct: 111 ---LTWEEFRKHRLGA-AQNCSATLKGNHKLTNGLLPLKKDWREVGIVTPVKNQGHCGSC 166

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYTH-QAGLES 458
           W FS  G LE  Y    GK +  S+ QLV+CA+  +  G   GL  Q  EY     GL++
Sbjct: 167 WTFSTTGALEAAYVQAFGKAIFLSEQQLVDCARAYNNFGCNGGLPSQAFEYIKANGGLDT 226

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLI 517
           E+ YPY   +G    C +    + +          G+E  +K  +    P+SV       
Sbjct: 227 EEAYPYTGVDG---VCKFSSENIGVQVLDSVNITLGAEDELKDAVAFVRPVSVAF----- 278

Query: 518 HFYNGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
              +G  + K+     +TC  +P D+ HAV+ VGYG ++D+PYWL +NSWG    D G+F
Sbjct: 279 EVVSGFRLYKSGVYTSDTCGNTPMDVNHAVVAVGYGVENDVPYWLIKNSWGADWGDNGYF 338

Query: 572 KIERGNNACGIEQIAGYATI 591
           K+E G N CG+   A Y  +
Sbjct: 339 KMEMGKNMCGVATCASYPVV 358



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 114/224 (50%), Gaps = 10/224 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G +P   DWR+  +  P  +Q  CGSCW FS  G LE  Y    GK +  S+ QLV+CA
Sbjct: 139 NGLLPLKKDWREVGIVTPVKNQGHCGSCWTFSTTGALEAAYVQAFGKAIFLSEQQLVDCA 198

Query: 68  KQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
           +  +  GC+G     + EY     GL++E+ YPY   +G    C +    + +       
Sbjct: 199 RAYNNFGCNGGLPSQAFEYIKANGGLDTEEAYPYTGVDG---VCKFSSENIGVQVLDSVN 255

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYG 181
           +     + +K  +    P+SV            + +  +D TC  +P D+ HAV+ VGYG
Sbjct: 256 ITLGAEDELKDAVAFVRPVSVAFEVVSGFRLYKSGVYTSD-TCGNTPMDVNHAVVAVGYG 314

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            ++++PYWL++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 315 VENDVPYWLIKNSWGADWGDNGYFKMEMGKNMCGVATCASYPVV 358



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 959  VKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            V   +TC  +P D+ HAV+ VGYG ++D+PYWL++NSWG    D G+FK+E G N CG+ 
Sbjct: 291  VYTSDTCGNTPMDVNHAVVAVGYGVENDVPYWLIKNSWGADWGDNGYFKMEMGKNMCGVA 350

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 351  TCASYPVV 358


>gi|56752859|gb|AAW24641.1| unknown [Schistosoma japonicum]
          Length = 331

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 31/319 (9%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWRLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGM 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC+G + + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCEGGYMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSV-LLN 878
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SV ++ 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            D +  Y       ND  C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+
Sbjct: 254 VDSLIMYKSGVFESND--CKYADINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKL 311

Query: 939 ERG-NNACGIEQIAGYATI 956
            R  +N CG+   A +  +
Sbjct: 312 RRNKHNMCGVASNASFPLL 330



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 117/221 (52%), Gaps = 10/221 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR         +Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSTWDWRDHGAVTAVKNQGMCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYGK+  
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVAVDSLIMYKSGVFESND--CKYADINHGVLVVGYGKEHG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 290 KDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 160/321 (49%), Gaps = 34/321 (10%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWRLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGM 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+    G  GC+G  ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP-YGNYGCEGGYMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN 513
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG+ 
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 514 S--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           +   LI + +G     ND  C   D+ H VL+VGYGK+    YWL +NSWG +   +G+F
Sbjct: 253 AVDSLIMYKSGV-FESND--CKYADINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYF 309

Query: 572 KIERG-NNACGIEQIAGYATI 591
           K+ R  +N CG+   A +  +
Sbjct: 310 KLRRNKHNMCGVASNASFPLL 330



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKYADINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|397492864|ref|XP_003817340.1| PREDICTED: cathepsin K [Pan paniscus]
          Length = 343

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 155/328 (47%), Gaps = 28/328 (8%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 695
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 27  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 86

Query: 696 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
              +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK
Sbjct: 87  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKK 138

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   
Sbjct: 139 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 198

Query: 812 SIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYK 869
           + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + +
Sbjct: 199 AFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 255

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG  
Sbjct: 256 VGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGEN 315

Query: 930 GPDEGFFKIERG-NNACGIEQIAGYATI 956
             ++G+  + R  NNACGI  +A +  +
Sbjct: 316 WGNKGYILMARNKNNACGIANLASFPKM 343



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 126 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 185

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 186 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 242

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q  
Sbjct: 243 EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG 302

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 303 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 343



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 329
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 27  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 86

Query: 330 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
              +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK
Sbjct: 87  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKK 138

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   + 
Sbjct: 139 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMT 197

Query: 446 QPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILY 503
              +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + 
Sbjct: 198 NAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVA 254

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
           + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG 
Sbjct: 255 RVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGE 314

Query: 564 IGPDEGFFKIERG-NNACGIEQIAGYATI 591
              ++G+  + R  NNACGI  +A +  +
Sbjct: 315 NWGNKGYILMARNKNNACGIANLASFPKM 343



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 280  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 339

Query: 1021 YATI 1024
            +  +
Sbjct: 340  FPKM 343


>gi|157864851|ref|XP_001681134.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124428|emb|CAJ02284.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|378943050|gb|AFC76266.1| cathepsin L-like protease [Leishmania major]
 gi|378943052|gb|AFC76267.1| cathepsin L-like protease [Leishmania major]
 gi|378943054|gb|AFC76268.1| cathepsin L-like protease [Leishmania major]
 gi|378943058|gb|AFC76270.1| cathepsin L-like protease [Leishmania major]
 gi|394331737|gb|AFN27091.1| cysteine protease [Leishmania major]
 gi|394331741|gb|AFN27093.1| cysteine protease [Leishmania major]
 gi|394331747|gb|AFN27096.1| cysteine protease [Leishmania major]
 gi|394331749|gb|AFN27097.1| cysteine protease [Leishmania major]
 gi|394331751|gb|AFN27098.1| cysteine protease [Leishmania major]
 gi|394331753|gb|AFN27099.1| cysteine protease [Leishmania major]
 gi|394331755|gb|AFN27100.1| cysteine protease [Leishmania major]
 gi|394331757|gb|AFN27101.1| cysteine protease [Leishmania major]
 gi|394331759|gb|AFN27102.1| cysteine protease [Leishmania major]
 gi|394331761|gb|AFN27103.1| cysteine protease [Leishmania major]
 gi|394331763|gb|AFN27104.1| cysteine protease [Leishmania major]
 gi|394331765|gb|AFN27105.1| cysteine protease [Leishmania major]
 gi|394331767|gb|AFN27106.1| cysteine protease [Leishmania major]
 gi|394331769|gb|AFN27107.1| cysteine protease [Leishmania major]
 gi|394331771|gb|AFN27108.1| cysteine protease [Leishmania major]
 gi|394331773|gb|AFN27109.1| cysteine protease [Leishmania major]
 gi|394331775|gb|AFN27110.1| cysteine protease [Leishmania major]
 gi|394331777|gb|AFN27111.1| cysteine protease [Leishmania major]
 gi|394331779|gb|AFN27112.1| cysteine protease [Leishmania major]
 gi|394331781|gb|AFN27113.1| cysteine protease [Leishmania major]
 gi|394331783|gb|AFN27114.1| cysteine protease [Leishmania major]
 gi|394331785|gb|AFN27115.1| cysteine protease [Leishmania major]
 gi|394331787|gb|AFN27116.1| cysteine protease [Leishmania major]
 gi|394331789|gb|AFN27117.1| cysteine protease [Leishmania major]
 gi|394331791|gb|AFN27118.1| cysteine protease [Leishmania major]
 gi|394331793|gb|AFN27119.1| cysteine protease [Leishmania major]
 gi|394331795|gb|AFN27120.1| cysteine protease [Leishmania major]
 gi|394331797|gb|AFN27121.1| cysteine protease [Leishmania major]
 gi|394331799|gb|AFN27122.1| cysteine protease [Leishmania major]
 gi|394331801|gb|AFN27123.1| cysteine protease [Leishmania major]
 gi|394331803|gb|AFN27124.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 31/326 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NACGIEQIAGYATIDVVKNDETCSPY 968
           NAC    + GY     V   ++ +PY
Sbjct: 327 NAC---LLTGYPV--SVHVSQSPTPY 347



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|332220191|ref|XP_003259241.1| PREDICTED: cathepsin K [Nomascus leucogenys]
          Length = 329

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 155/328 (47%), Gaps = 28/328 (8%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 695
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 696 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
              +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 812 SIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYK 869
           + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + +
Sbjct: 185 AFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 241

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG  
Sbjct: 242 VGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGEN 301

Query: 930 GPDEGFFKIERG-NNACGIEQIAGYATI 956
             ++G+  + R  NNACGI  +A +  +
Sbjct: 302 WGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q  
Sbjct: 229 EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 329
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 330 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
              +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   + 
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMT 183

Query: 446 QPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILY 503
              +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + 
Sbjct: 184 NAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVA 240

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
           + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG 
Sbjct: 241 RVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGE 300

Query: 564 IGPDEGFFKIERG-NNACGIEQIAGYATI 591
              ++G+  + R  NNACGI  +A +  +
Sbjct: 301 NWGNKGYILMARNKNNACGIANLASFPKM 329



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|151547430|gb|ABS12459.1| cysteine protease Cp [Citrus sinensis]
          Length = 361

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 144/313 (46%), Gaps = 26/313 (8%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILC 708
           +F  F  + G+ Y + EE+K RF  F ++              R G ++F+D S EE   
Sbjct: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQ- 119

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
               +      +   A  +   K+  +V     +P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 120 ----RHRLGAAQNCSATTKGNHKLTADV-----LPETKDWRESGIVSPVKDQGHCGSCWT 170

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE  Y    GK +  S+ QLV+CA+  +  GC+G     + EY  +  GL++E+
Sbjct: 171 FSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEE 230

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNS-DLIH 883
            YPY   +G    C +    V +       +     + ++  +    P+SV     D   
Sbjct: 231 AYPYTGKDG---VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFR 287

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 943
            Y            +P D+ HAV+ VGYG +D +PYWL++NSWG    D G+FKI+ G N
Sbjct: 288 FYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKIKMGKN 347

Query: 944 ACGIEQIAGYATI 956
            CGI   A Y  +
Sbjct: 348 MCGIATCASYPVV 360



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 143/313 (45%), Gaps = 25/313 (7%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILC 342
           +F  F  + G+ Y + EE+K RF  F ++              R G ++F+D S EE   
Sbjct: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQ- 119

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
               +      +   A  +   K+  +V     +P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 120 ----RHRLGAAQNCSATTKGNHKLTADV-----LPETKDWRESGIVSPVKDQGHCGSCWT 170

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE  Y    GK +  S+ QLV+CA+  +  G   GL  Q  EY  +  GL++E+
Sbjct: 171 FSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEE 230

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-HLIH 518
            YPY   +G    C +    V +          G+E  ++  +    P+SV         
Sbjct: 231 AYPYTGKDG---VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFR 287

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           FY            +P D+ HAV+ VGYG +D +PYWL +NSWG    D G+FKI+ G N
Sbjct: 288 FYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKIKMGKN 347

Query: 579 ACGIEQIAGYATI 591
            CGI   A Y  +
Sbjct: 348 MCGIATCASYPVV 360



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 109/220 (49%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y    GK +  S+ QLV+CA+  
Sbjct: 144 LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 203

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
           +  GC+G     + EY  +  GL++E+ YPY   +G    C +    V +       +  
Sbjct: 204 NNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG---VCKFSSENVGVQVLDSVNITL 260

Query: 127 NGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              + ++  +    P+SV     D    Y            +P D+ HAV+ VGYG +D 
Sbjct: 261 GAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 320

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +PYWL++NSWG    D G+FKI+ G N CGI   A Y  +
Sbjct: 321 VPYWLIKNSWGENWGDHGYFKIKMGKNMCGIATCASYPVV 360


>gi|157864855|ref|XP_001681136.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124430|emb|CAJ02286.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 31/326 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMTAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NACGIEQIAGYATIDVVKNDETCSPY 968
           NAC    + GY     V   ++ +PY
Sbjct: 327 NAC---LLTGYPV--SVHVSQSPTPY 347



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMTAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMTAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|426331364|ref|XP_004026652.1| PREDICTED: cathepsin K [Gorilla gorilla gorilla]
          Length = 329

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 155/328 (47%), Gaps = 28/328 (8%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 695
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 696 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
              +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 812 SIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYK 869
           + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + +
Sbjct: 185 AFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 241

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG  
Sbjct: 242 VGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGEN 301

Query: 930 GPDEGFFKIERG-NNACGIEQIAGYATI 956
             ++G+  + R  NNACGI  +A +  +
Sbjct: 302 WGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q  
Sbjct: 229 EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 329
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 330 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
              +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   + 
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMT 183

Query: 446 QPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILY 503
              +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + 
Sbjct: 184 NAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVA 240

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
           + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG 
Sbjct: 241 RVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGE 300

Query: 564 IGPDEGFFKIERG-NNACGIEQIAGYATI 591
              ++G+  + R  NNACGI  +A +  +
Sbjct: 301 NWGNKGYILMARNKNNACGIANLASFPKM 329



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|449139100|gb|AGE89905.1| cathepsin-like cysteine proteinase [Spodoptera littoralis NPV]
          Length = 336

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 19/301 (6%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEIL-C 708
           F+ FI +  ++Y   ++  + F  FK++            H  YG ++FSD         
Sbjct: 33  FENFIKQHNKEYTTPDQRDDAFVNFKRNLVNMNAMNNISNHAVYGINKFSDIDKITFANV 92

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
             G   +    +    D  ++ + +         P+++DWRK +      +Q  CGSCWA
Sbjct: 93  HAGLVLTLNATDSNF-DPYRLCEFVTVAGPSARTPESFDWRKLHKVTKVKEQGVCGSCWA 151

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDY 827
           F+  G +E QYAI    L++ S+ QL++C +   GCDG     +  E     G+E E DY
Sbjct: 152 FAAIGNIESQYAILHDSLIDLSEQQLLDCDRIDQGCDGGLMHLAFQEIMRIGGVEHEIDY 211

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYN 886
           PY+   G ++ C    SK  +     + +       + ++LYK GP++V ++   I DY 
Sbjct: 212 PYQ---GIEYACRSAPSKFAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCRDIIDYR 268

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
                     C+   L HAVLLVGYG +++ PYW+ +NSWG    + G+F+  R  NACG
Sbjct: 269 SGIA----TVCNDNGLNHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNINACG 324

Query: 947 I 947
           +
Sbjct: 325 M 325



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 146/304 (48%), Gaps = 24/304 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEIL-C 342
           F+ FI +  ++Y   ++  + F  FK++            H  YG ++FSD         
Sbjct: 33  FENFIKQHNKEYTTPDQRDDAFVNFKRNLVNMNAMNNISNHAVYGINKFSDIDKITFANV 92

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
             G   +    +    D  ++ + +         P+++DWRK +      +Q  CGSCWA
Sbjct: 93  HAGLVLTLNATDSNF-DPYRLCEFVTVAGPSARTPESFDWRKLHKVTKVKEQGVCGSCWA 151

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI--EYTHQAGLESEK 460
           F+  G +E QYAI    L++ S+ QL++C +   GC G  GL      E     G+E E 
Sbjct: 152 FAAIGNIESQYAILHDSLIDLSEQQLLDCDRIDQGCDG--GLMHLAFQEIMRIGGVEHEI 209

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGSETMKKILYKYGPLSVGLNSH-LIH 518
           DYPY+   G ++ C    SK  +     + Y       + ++LYK GP++V ++   +I 
Sbjct: 210 DYPYQ---GIEYACRSAPSKFAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCRDIID 266

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
           + +G         C+   L HAVLLVGYG ++D PYW+ +NSWG    + G+F+  R  N
Sbjct: 267 YRSGIA-----TVCNDNGLNHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNIN 321

Query: 579 ACGI 582
           ACG+
Sbjct: 322 ACGM 325



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 112/208 (53%), Gaps = 9/208 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P+++DWRK +      +Q  CGSCWAF+  G +E QYAI    L++ S+ QL++C +  
Sbjct: 125 TPESFDWRKLHKVTKVKEQGVCGSCWAFAAIGNIESQYAILHDSLIDLSEQQLLDCDRID 184

Query: 71  SGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNG 128
            GCDG     +  E     G+E E DYPY+   G ++ C    SK  +     + +    
Sbjct: 185 QGCDGGLMHLAFQEIMRIGGVEHEIDYPYQ---GIEYACRSAPSKFAVRLSHCYQYDLRD 241

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
              + ++LYK GP++V ++   I DY           C+   L HAVLLVGYG +++ PY
Sbjct: 242 ERKLLELLYKNGPIAVAIDCRDIIDYRSGIA----TVCNDNGLNHAVLLVGYGIENDTPY 297

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGI 216
           W+ +NSWG    + G+F+  R  NACG+
Sbjct: 298 WIFKNSWGSNWGENGYFRARRNINACGM 325



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 35/52 (67%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
             C+   L HAVLLVGYG ++D PYW+ +NSWG    + G+F+  R  NACG+
Sbjct: 274  VCNDNGLNHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNINACGM 325


>gi|130502110|ref|NP_001076110.1| cathepsin K precursor [Oryctolagus cuniculus]
 gi|1168794|sp|P43236.1|CATK_RABIT RecName: Full=Cathepsin K; AltName: Full=Protein OC-2; Flags:
           Precursor
 gi|454187|dbj|BAA03125.1| OC-2 protein [Oryctolagus cuniculus]
          Length = 329

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +   R      L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENYGCGGGYMTNAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQRNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE CS  ++ HAVL VGYG Q    +W+++NSWG    +
Sbjct: 245 VSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYILMARNKNNACGIANLASFPKM 329



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +   R      L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENYGCGG-GYMTNAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQRNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE CS  ++ HAVL VGYG Q    +W+ +NSWG    
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYILMARNKNNACGIANLASFPKM 329



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 172 SENYGCGGGYMTNAFQYVQRNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE CS  ++ HAVL VGYG Q  
Sbjct: 229 EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQKG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWIIKNSWGESWGNKGYILMARNKNNACGIANLASFPKM 329



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE CS  ++ HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|395729888|ref|XP_002810309.2| PREDICTED: cathepsin K [Pongo abelii]
          Length = 343

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 155/328 (47%), Gaps = 28/328 (8%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 695
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 27  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 86

Query: 696 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
              +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK
Sbjct: 87  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKK 138

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   
Sbjct: 139 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 198

Query: 812 SIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYK 869
           + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + +
Sbjct: 199 AFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 255

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG  
Sbjct: 256 VGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGEN 315

Query: 930 GPDEGFFKIERG-NNACGIEQIAGYATI 956
             ++G+  + R  NNACGI  +A +  +
Sbjct: 316 WGNKGYILMARNKNNACGIANLASFPKM 343



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 126 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 185

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 186 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 242

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q  
Sbjct: 243 EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG 302

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 303 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 343



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 329
           S     E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 27  SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 86

Query: 330 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
              +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK
Sbjct: 87  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKK 138

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
               P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   + 
Sbjct: 139 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMT 197

Query: 446 QPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILY 503
              +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + 
Sbjct: 198 NAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVA 254

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
           + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG 
Sbjct: 255 RVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGE 314

Query: 564 IGPDEGFFKIERG-NNACGIEQIAGYATI 591
              ++G+  + R  NNACGI  +A +  +
Sbjct: 315 NWGNKGYILMARNKNNACGIANLASFPKM 343



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 280  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 339

Query: 1021 YATI 1024
            +  +
Sbjct: 340  FPKM 343


>gi|157864849|ref|XP_001681133.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124427|emb|CAJ02283.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 31/326 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGKDWGEKGYVRVTMGV 326

Query: 943 NACGIEQIAGYATIDVVKNDETCSPY 968
           NAC    + GY     V   ++ +PY
Sbjct: 327 NAC---LLTGYPV--SVHVSQSPTPY 347



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGKDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGKDWGEKGYVRVTMGVNAC 329


>gi|157868354|ref|XP_001682730.1| cysteine peptidase A (CPA) [Leishmania major strain Friedlin]
 gi|68126185|emb|CAJ07238.1| cysteine peptidase A (CPA) [Leishmania major strain Friedlin]
          Length = 354

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 152/340 (44%), Gaps = 31/340 (9%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 685
           VV     L  +  L  DN      +  F  + G+ +  D +   RF  FKQ+        
Sbjct: 18  VVCYGSALVAQTPLGVDNFIASAHYGRFKERHGKSFGEDADEGHRFNAFKQNMQTAYFLN 77

Query: 686 GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 740
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V    M V    
Sbjct: 78  THNPHAHYDVSGKFADLTPQEFAKLYLNPDYYAHRGKDYKEHVHVDDSVLSGAMSV---- 133

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
                 DWR+K    P  +Q  CGSCWAFS  G +E Q+A+K   LV  S+  LV C   
Sbjct: 134 ------DWREKGAVTPVKNQGMCGSCWAFSAIGNIESQWALKNHSLVSLSEQMLVSCDDI 187

Query: 801 CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
             GC+G   + ++E+    H   + +EK YPY +A G    C +DK +            
Sbjct: 188 DDGCNGGLMDQAMEWIIQHHNGTVPTEKSYPYASAGGTSPPC-HDKGEFGARISGYMSLP 246

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 917
           +  + +   + K GP++V +++     Y G  +      C    L H VL+VG+ K+   
Sbjct: 247 HDEKAIAAYVEKKGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNKRAKP 302

Query: 918 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
           PYW+V+NSWG    ++G+ ++  G+N C ++     AT+D
Sbjct: 303 PYWIVKNSWGTSWGEKGYIRLAMGSNQCLLKNYPVTATVD 342



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 150/341 (43%), Gaps = 32/341 (9%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 319
           VV     L  +  L  DN      +  F  + G+ +  D +   RF  FKQ+        
Sbjct: 18  VVCYGSALVAQTPLGVDNFIASAHYGRFKERHGKSFGEDADEGHRFNAFKQNMQTAYFLN 77

Query: 320 GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 374
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V    M V    
Sbjct: 78  THNPHAHYDVSGKFADLTPQEFAKLYLNPDYYAHRGKDYKEHVHVDDSVLSGAMSV---- 133

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
                 DWR+K    P  +Q  CGSCWAFS  G +E Q+A+K   LV  S+  LV C   
Sbjct: 134 ------DWREKGAVTPVKNQGMCGSCWAFSAIGNIESQWALKNHSLVSLSEQMLVSCDDI 187

Query: 435 CSGCGGCDGLEQPIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY 491
             GC G   ++Q +E+    H   + +EK YPY +  G    C +DK +           
Sbjct: 188 DDGCNG-GLMDQAMEWIIQHHNGTVPTEKSYPYASAGGTSPPC-HDKGEFGARISGYMSL 245

Query: 492 FNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
            +  + +   + K GP++V +++     Y G  +      C    L H VL+VG+ K+  
Sbjct: 246 PHDEKAIAAYVEKKGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNKRAK 301

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
            PYW+ +NSWG    ++G+ ++  G+N C ++     AT+D
Sbjct: 302 PPYWIVKNSWGTSWGEKGYIRLAMGSNQCLLKNYPVTATVD 342



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 109/214 (50%), Gaps = 8/214 (3%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR+K    P  +Q  CGSCWAFS  G +E Q+A+K   LV  S+  LV C     GC+G
Sbjct: 134 DWREKGAVTPVKNQGMCGSCWAFSAIGNIESQWALKNHSLVSLSEQMLVSCDDIDDGCNG 193

Query: 76  CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 132
              + ++E+    H   + +EK YPY +A G    C +DK +            +  + +
Sbjct: 194 GLMDQAMEWIIQHHNGTVPTEKSYPYASAGGTSPPC-HDKGEFGARISGYMSLPHDEKAI 252

Query: 133 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 192
              + K GP++V +++     Y G  +      C    L H VL+VG+ K+   PYW+V+
Sbjct: 253 AAYVEKKGPVAVAVDATTWQLYFGGVV----TLCFGLSLNHGVLVVGFNKRAKPPYWIVK 308

Query: 193 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           NSWG    ++G+ ++  G+N C ++     AT+D
Sbjct: 309 NSWGTSWGEKGYIRLAMGSNQCLLKNYPVTATVD 342



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L H VL+VG+ K+   PYW+V+NSWG    ++G+ ++  G+N C ++     AT+
Sbjct: 282  CFGLSLNHGVLVVGFNKRAKPPYWIVKNSWGTSWGEKGYIRLAMGSNQCLLKNYPVTATV 341

Query: 1025 D 1025
            D
Sbjct: 342  D 342


>gi|394331739|gb|AFN27092.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 31/326 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHCRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NACGIEQIAGYATIDVVKNDETCSPY 968
           NAC    + GY     V   ++ +PY
Sbjct: 327 NAC---LLTGYPV--SVHVSQSPTPY 347



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHCRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|155970232|gb|ABU41785.1| cysteine protease [Rosa x borboniana]
          Length = 357

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 149/321 (46%), Gaps = 38/321 (11%)

Query: 655 LETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEI 706
           + +F  F  +  ++Y + EE+  RFE F ++       ++K   Y  G + F+D      
Sbjct: 55  VRSFARFAYRYEKRYESVEEMGRRFEIFAENKKLIRSTNRKGLSYKLGVNRFAD------ 108

Query: 707 LCKTGFKWSERTYERIVADRE-KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
                + W E    R+ A +             D   P   +WR + +  P  DQ  CGS
Sbjct: 109 -----WTWEEFQRHRLGAAQNCSATTKGNHKLTDAVPPLTKNWRDEGIVTPVKDQGHCGS 163

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLE 822
           CW FS  G LE  Y    GK +  S+ QLV+CA   +  GC G     + EY  +  GL+
Sbjct: 164 CWTFSTTGALEAAYVQAFGKQISPSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLD 223

Query: 823 SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSDL 881
           +E+ YPY   +G    C +    V +       +  N  E +K  +    P+SV     +
Sbjct: 224 TEQAYPYTAVDG---ACKFSSENVGVRVLDSVNITLNDEEELKHAVAFVRPVSVAF--QV 278

Query: 882 IHDYNGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
           + D+    + K+     ETC  +P D+ HAVL VGYG ++ +PYWL++NSWG    D G+
Sbjct: 279 VQDFR---LYKSGVYTSETCGNTPMDVNHAVLAVGYGVENGVPYWLIKNSWGQSWGDNGY 335

Query: 936 FKIERGNNACGIEQIAGYATI 956
           FK+E G N CG+   A Y  +
Sbjct: 336 FKMEYGKNMCGVATCASYPVV 356



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 143/317 (45%), Gaps = 29/317 (9%)

Query: 289 LETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEI 340
           + +F  F  +  ++Y + EE+  RFE F ++       ++K   Y  G + F+D      
Sbjct: 55  VRSFARFAYRYEKRYESVEEMGRRFEIFAENKKLIRSTNRKGLSYKLGVNRFAD------ 108

Query: 341 LCKTGFKWSERTYERIVADRE-KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
                + W E    R+ A +             D   P   +WR + +  P  DQ  CGS
Sbjct: 109 -----WTWEEFQRHRLGAAQNCSATTKGNHKLTDAVPPLTKNWRDEGIVTPVKDQGHCGS 163

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLE 457
           CW FS  G LE  Y    GK +  S+ QLV+CA   +  G   GL  Q  EY  +  GL+
Sbjct: 164 CWTFSTTGALEAAYVQAFGKQISPSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLD 223

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLNSHL 516
           +E+ YPY   +G    C +    V +       +  N  E +K  +    P+SV     +
Sbjct: 224 TEQAYPYTAVDG---ACKFSSENVGVRVLDSVNITLNDEEELKHAVAFVRPVSVAFQV-V 279

Query: 517 IHFYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
             F          ETC  +P D+ HAVL VGYG ++ +PYWL +NSWG    D G+FK+E
Sbjct: 280 QDFRLYKSGVYTSETCGNTPMDVNHAVLAVGYGVENGVPYWLIKNSWGQSWGDNGYFKME 339

Query: 575 RGNNACGIEQIAGYATI 591
            G N CG+   A Y  +
Sbjct: 340 YGKNMCGVATCASYPVV 356



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 115/228 (50%), Gaps = 18/228 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D   P   +WR + +  P  DQ  CGSCW FS  G LE  Y    GK +  S+ QLV+CA
Sbjct: 137 DAVPPLTKNWRDEGIVTPVKDQGHCGSCWTFSTTGALEAAYVQAFGKQISPSEQQLVDCA 196

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
              +  GC G     + EY  +  GL++E+ YPY   +G    C +    V +       
Sbjct: 197 GAFNNFGCSGGLPSQAFEYIKYNGGLDTEQAYPYTAVDG---ACKFSSENVGVRVLDSVN 253

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLL 177
           +  N  E +K  +    P+SV     ++ D+    + K+     ETC  +P D+ HAVL 
Sbjct: 254 ITLNDEEELKHAVAFVRPVSVAF--QVVQDFR---LYKSGVYTSETCGNTPMDVNHAVLA 308

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           VGYG ++ +PYWL++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 309 VGYGVENGVPYWLIKNSWGQSWGDNGYFKMEYGKNMCGVATCASYPVV 356


>gi|346466067|gb|AEO32878.1| hypothetical protein [Amblyomma maculatum]
          Length = 358

 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 161/334 (48%), Gaps = 26/334 (7%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGTS- 696
           L +  +     E +   + AF    G++Y ++ E   R + + ++  K    +E+Y  + 
Sbjct: 33  LFVTAAAITHQELVGAEWSAFKALHGKEYHSETEEYYRLKIYMENRLKIARHNEKYANNK 92

Query: 697 --------EFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 747
                   EF D    E +  + GFK + R+       RE    +  E  +D  +P   D
Sbjct: 93  ASYKLAMNEFGDLLHHEFVSTRNGFKRNYRS-----TPREGSFYIEPEGIEDKHLPKTVD 147

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCD 805
           WRKK    P  +Q  CGSCWAFS  G LEGQ+  KTG++V  S+  LV+C+ +   +GC+
Sbjct: 148 WRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKTGRMVSLSEQNLVDCSGKFGNNGCE 207

Query: 806 GCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGSETM 863
           G   + + +Y     G+++E  YPY   NG    C ++KS V    TG   +     + +
Sbjct: 208 GGLMDNAFKYIKANGGIDTELSYPY---NGTDGICHFEKSDVGATDTGFVDIPEGNEQLL 264

Query: 864 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 923
           KK +   GP+SV +++        +    ++  CS   L H VL+VGYG +D   YWLV+
Sbjct: 265 KKAVATVGPVSVAIDASHESFQFYSQGVYDEPECSSESLDHGVLVVGYGTKDGQDYWLVK 324

Query: 924 NSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           NSWG    D+G+  + R   N CGI   A Y  +
Sbjct: 325 NSWGTTWGDDGYIYMTRNKENQCGIASSASYPLV 358



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 161/335 (48%), Gaps = 27/335 (8%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGTS- 330
           L +  +     E +   + AF    G++Y ++ E   R + + ++  K    +E+Y  + 
Sbjct: 33  LFVTAAAITHQELVGAEWSAFKALHGKEYHSETEEYYRLKIYMENRLKIARHNEKYANNK 92

Query: 331 --------EFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 381
                   EF D    E +  + GFK + R+       RE    +  E  +D  +P   D
Sbjct: 93  ASYKLAMNEFGDLLHHEFVSTRNGFKRNYRS-----TPREGSFYIEPEGIEDKHLPKTVD 147

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGC 441
           WRKK    P  +Q  CGSCWAFS  G LEGQ+  KTG++V  S+  LV+C+ +  G  GC
Sbjct: 148 WRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKTGRMVSLSEQNLVDCSGKF-GNNGC 206

Query: 442 DG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLYFNGSET 497
           +G  ++   +Y     G+++E  YPY   NG    C ++KS V    TG   +     + 
Sbjct: 207 EGGLMDNAFKYIKANGGIDTELSYPY---NGTDGICHFEKSDVGATDTGFVDIPEGNEQL 263

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLA 557
           +KK +   GP+SV +++    F   +    ++  CS   L H VL+VGYG +D   YWL 
Sbjct: 264 LKKAVATVGPVSVAIDASHESFQFYSQGVYDEPECSSESLDHGVLVVGYGTKDGQDYWLV 323

Query: 558 RNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           +NSWG    D+G+  + R   N CGI   A Y  +
Sbjct: 324 KNSWGTTWGDDGYIYMTRNKENQCGIASSASYPLV 358



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 119/224 (53%), Gaps = 8/224 (3%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +D  +P   DWRKK    P  +Q  CGSCWAFS  G LEGQ+  KTG++V  S+  LV+C
Sbjct: 138 EDKHLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKTGRMVSLSEQNLVDC 197

Query: 67  AKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKD 122
           + +   +GC+G   + + +Y     G+++E  YPY   NG    C ++KS V    TG  
Sbjct: 198 SGKFGNNGCEGGLMDNAFKYIKANGGIDTELSYPY---NGTDGICHFEKSDVGATDTGFV 254

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            +     + +KK +   GP+SV +++        +    ++  CS   L H VL+VGYG 
Sbjct: 255 DIPEGNEQLLKKAVATVGPVSVAIDASHESFQFYSQGVYDEPECSSESLDHGVLVVGYGT 314

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           +D   YWLV+NSWG    D+G+  + R   N CGI   A Y  +
Sbjct: 315 KDGQDYWLVKNSWGTTWGDDGYIYMTRNKENQCGIASSASYPLV 358



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 16/109 (14%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  I  GN     + +A    + V               V ++  CS   L H VL+
Sbjct: 250  DTGFVDIPEGNEQLLKKAVATVGPVSVAIDASHESFQFYSQGVYDEPECSSESLDHGVLV 309

Query: 977  VGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
            VGYG +D   YWLV+NSWG    D+G+  + R   N CGI   A Y  +
Sbjct: 310  VGYGTKDGQDYWLVKNSWGTTWGDDGYIYMTRNKENQCGIASSASYPLV 358


>gi|394331805|gb|AFN27125.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 31/326 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKACADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVST 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NACGIEQIAGYATIDVVKNDETCSPY 968
           NAC    + GY     V   ++ +PY
Sbjct: 327 NAC---LLTGYPV--SVHVSQSPTPY 347



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKACADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVS 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVSTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C    L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|108755401|emb|CAI77919.1| cathepsin H [Guillardia theta]
 gi|122890320|emb|CAJ73711.1| Cathepsin H [Guillardia theta]
          Length = 353

 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 160/338 (47%), Gaps = 59/338 (17%)

Query: 655 LETFKAFIVKRGRQYANDEEIKERFEYF---KQDGHKKHERYGTS------EFSDRSPEE 705
           L  F+ +  K  + Y +D     R   F    ++    + R GT+      ++SD     
Sbjct: 30  LREFERWTKKHSKVYEDDTTYLRRLASFCVSLKEVEAINSRPGTTWRAALNQYSD----- 84

Query: 706 ILCKTGFKWSERTYERIVADREKVEKMLMEVEK---DGPVPDAWDWRKK-----NVTGPA 757
                   W E  + +++A++     +   VEK    G V D +DWR +     +     
Sbjct: 85  ------LTWEEFKHAKLMAEQNCGATVTTPVEKLVKMGIVADEFDWRNQTCGETSCVSMV 138

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCDGCFFEPSIEY 815
            +Q  CGSCW FS A  LE  +AIKTG++V  S+ QLV+CA   + +GC+G     + EY
Sbjct: 139 KNQGTCGSCWTFSTAAALESLHAIKTGEMVLLSEQQLVDCAADFKNNGCNGGLPSQAFEY 198

Query: 816 -THQAGLESEKDYPYKNANGE----KFKCAYDK-----------SKVKLFTGKDFLHFNG 859
             +  GL   ++YPY   +G        CA+D            SKV  FT  D +    
Sbjct: 199 IMYNGGLSKMEEYPYVCGDGHCNVTGGPCAFDPVGKPWSVGAKVSKVANFTPGDEI---- 254

Query: 860 SETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQD 915
             +MK ++  + P+SV     +DL H  +G     +  TC  +P  + HAVL VGYG + 
Sbjct: 255 --SMKTVVGSHNPISVAFEVVADLRHYSSGV---YSSPTCVGTPDKVNHAVLAVGYGTEG 309

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
            IPYW ++NSWG    D G+FKI+RG+N CGI   A +
Sbjct: 310 GIPYWTIKNSWGFAWGDNGYFKIQRGSNKCGISVCASF 347



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 161/340 (47%), Gaps = 62/340 (18%)

Query: 289 LETFKAFIVKRGRQYANDEEIKERFEYF---KQDGHKKHERYGTS------EFSDRSPEE 339
           L  F+ +  K  + Y +D     R   F    ++    + R GT+      ++SD     
Sbjct: 30  LREFERWTKKHSKVYEDDTTYLRRLASFCVSLKEVEAINSRPGTTWRAALNQYSD----- 84

Query: 340 ILCKTGFKWSERTYERIVADREKVEKMLMEVEK---DGPVPDAWDWRKK-----NVTGPA 391
                   W E  + +++A++     +   VEK    G V D +DWR +     +     
Sbjct: 85  ------LTWEEFKHAKLMAEQNCGATVTTPVEKLVKMGIVADEFDWRNQTCGETSCVSMV 138

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCGGCDGL-EQPI 448
            +Q  CGSCW FS A  LE  +AIKTG++V  S+ QLV+CA   + +GC G  GL  Q  
Sbjct: 139 KNQGTCGSCWTFSTAAALESLHAIKTGEMVLLSEQQLVDCAADFKNNGCNG--GLPSQAF 196

Query: 449 EY-THQAGLESEKDYPYRNGNGE----KFKCAYDK-----------SKVKLFTGKDFLYF 492
           EY  +  GL   ++YPY  G+G        CA+D            SKV  FT  D +  
Sbjct: 197 EYIMYNGGLSKMEEYPYVCGDGHCNVTGGPCAFDPVGKPWSVGAKVSKVANFTPGDEI-- 254

Query: 493 NGSETMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETC--SPYDLGHAVLLVGYGK 548
               +MK ++  + P+SV     + L H+ +G     +  TC  +P  + HAVL VGYG 
Sbjct: 255 ----SMKTVVGSHNPISVAFEVVADLRHYSSGV---YSSPTCVGTPDKVNHAVLAVGYGT 307

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
           +  IPYW  +NSWG    D G+FKI+RG+N CGI   A +
Sbjct: 308 EGGIPYWTIKNSWGFAWGDNGYFKIQRGSNKCGISVCASF 347



 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 126/243 (51%), Gaps = 36/243 (14%)

Query: 7   KDGPVPDAWDWRKK-----NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           K G V D +DWR +     +      +Q  CGSCW FS A  LE  +AIKTG++V  S+ 
Sbjct: 114 KMGIVADEFDWRNQTCGETSCVSMVKNQGTCGSCWTFSTAAALESLHAIKTGEMVLLSEQ 173

Query: 62  QLVECAK--QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGE----KFKCAYDK-- 112
           QLV+CA   + +GC+G     + EY  +  GL   ++YPY   +G        CA+D   
Sbjct: 174 QLVDCAADFKNNGCNGGLPSQAFEYIMYNGGLSKMEEYPYVCGDGHCNVTGGPCAFDPVG 233

Query: 113 ---------SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRK 161
                    SKV  FT  D +      +MK ++  + P+SV     +DL H  +G     
Sbjct: 234 KPWSVGAKVSKVANFTPGDEI------SMKTVVGSHNPISVAFEVVADLRHYSSGV---Y 284

Query: 162 NDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           +  TC  +P  + HAVL VGYG +  IPYW ++NSWG    D G+FKI+RG+N CGI   
Sbjct: 285 SSPTCVGTPDKVNHAVLAVGYGTEGGIPYWTIKNSWGFAWGDNGYFKIQRGSNKCGISVC 344

Query: 220 AGY 222
           A +
Sbjct: 345 ASF 347


>gi|1749812|emb|CAA90237.1| cysteine proteinase LmCPB1 [Leishmania mexicana]
          Length = 359

 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 139/301 (46%), Gaps = 22/301 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFCAR 97

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHTPQHYPKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C     GCDG     + ++  Q     L +E  
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLYTEDS 213

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+ + SK+ +    D     GS  + M   L K GP+++ L++     
Sbjct: 214 YPYVSGNGYLPECS-NSSKLVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 272

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C    + HAVLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 273 YKSGVLT----ACIGKQVNHAVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 328

Query: 945 C 945
           C
Sbjct: 329 C 329



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 140/302 (46%), Gaps = 23/302 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFCAR 97

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHTPQHYPKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C     GC G   L Q  ++  Q     L +E 
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLML-QAFDWLLQNTNGHLYTED 212

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+ + SK+ +    D     GS  + M   L K GP+++ L++    
Sbjct: 213 SYPYVSGNGYLPECS-NSSKLVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 271

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C    + HAVLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 272 SYKSGVLT----ACIGKQVNHAVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 327

Query: 579 AC 580
           AC
Sbjct: 328 AC 329



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 109/209 (52%), Gaps = 10/209 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMN 185

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GCDG     + ++  Q     L +E  YPY + NG   +C+ + SK+ +    D     
Sbjct: 186 DGCDGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYLPECS-NSSKLVVGAQIDGHVLI 244

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C    + HAVLLVGY     
Sbjct: 245 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLT----ACIGKQVNHAVLLVGYDMTGE 300

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 301 VPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|391332597|ref|XP_003740719.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 134/271 (49%), Gaps = 17/271 (6%)

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           R G + F+D +P+E     G         R  A+  +V K+     +   VPD  DWR +
Sbjct: 71  RLGLNGFADMTPDEFEKYRG--------TRFEANEARVSKLQHRDNRSMHVPDTVDWRTE 122

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCDGCFF 809
               P  +Q  CGSCWAFS  G LEGQ+  ++G LV  S+  LV+C+     +GC+G   
Sbjct: 123 GYVTPVKNQGVCGSCWAFSTTGALEGQHFRRSGDLVSLSEQMLVDCSAVYGNAGCNGGLM 182

Query: 810 EPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKIL 867
           + +  +   A GLE+EK YPY   +G    C +D   +    TG   +     E +K+  
Sbjct: 183 DNAFRFIKDAGGLETEKSYPYTGKDG---TCHFDARGIGAKLTGFVDVPSRDEEALKEAA 239

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSW 926
              GP+SV +++   +         ++ TCS   L H VL+VGYG  +D   YWLV+NSW
Sbjct: 240 GVVGPVSVAIDASGQNFQFYKDGVYDEITCSSTSLDHGVLVVGYGTTRDGKDYWLVKNSW 299

Query: 927 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           G      G+ ++ R   N CGI  +A Y T+
Sbjct: 300 GSSWGQSGYIQMSRNKENQCGIATMASYPTV 330



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 134/272 (49%), Gaps = 18/272 (6%)

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           R G + F+D +P+E     G         R  A+  +V K+     +   VPD  DWR +
Sbjct: 71  RLGLNGFADMTPDEFEKYRG--------TRFEANEARVSKLQHRDNRSMHVPDTVDWRTE 122

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG-- 443
               P  +Q  CGSCWAFS  G LEGQ+  ++G LV  S+  LV+C+    G  GC+G  
Sbjct: 123 GYVTPVKNQGVCGSCWAFSTTGALEGQHFRRSGDLVSLSEQMLVDCSA-VYGNAGCNGGL 181

Query: 444 LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKI 501
           ++    +   A GLE+EK YPY   +G    C +D   +    TG   +     E +K+ 
Sbjct: 182 MDNAFRFIKDAGGLETEKSYPYTGKDG---TCHFDARGIGAKLTGFVDVPSRDEEALKEA 238

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIPYWLARNS 560
               GP+SV +++   +F        ++ TCS   L H VL+VGYG  +D   YWL +NS
Sbjct: 239 AGVVGPVSVAIDASGQNFQFYKDGVYDEITCSSTSLDHGVLVVGYGTTRDGKDYWLVKNS 298

Query: 561 WGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           WG      G+ ++ R   N CGI  +A Y T+
Sbjct: 299 WGSSWGQSGYIQMSRNKENQCGIATMASYPTV 330



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 115/221 (52%), Gaps = 9/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK-- 68
           VPD  DWR +    P  +Q  CGSCWAFS  G LEGQ+  ++G LV  S+  LV+C+   
Sbjct: 113 VPDTVDWRTEGYVTPVKNQGVCGSCWAFSTTGALEGQHFRRSGDLVSLSEQMLVDCSAVY 172

Query: 69  QCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHF 126
             +GC+G   + +  +   A GLE+EK YPY   +G    C +D   +    TG   +  
Sbjct: 173 GNAGCNGGLMDNAFRFIKDAGGLETEKSYPYTGKDG---TCHFDARGIGAKLTGFVDVPS 229

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDN 185
              E +K+     GP+SV +++   +         ++ TCS   L H VL+VGYG  +D 
Sbjct: 230 RDEEALKEAAGVVGPVSVAIDASGQNFQFYKDGVYDEITCSSTSLDHGVLVVGYGTTRDG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YWLV+NSWG      G+ ++ R   N CGI  +A Y T+
Sbjct: 290 KDYWLVKNSWGSSWGQSGYIQMSRNKENQCGIATMASYPTV 330



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 2/70 (2%)

Query: 957  DVVKNDETCSPYDLGHAVLLVGYGK-QDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACG 1014
            D V ++ TCS   L H VL+VGYG  +D   YWLV+NSWG      G+ ++ R   N CG
Sbjct: 261  DGVYDEITCSSTSLDHGVLVVGYGTTRDGKDYWLVKNSWGSSWGQSGYIQMSRNKENQCG 320

Query: 1015 IEQIAGYATI 1024
            I  +A Y T+
Sbjct: 321  IATMASYPTV 330


>gi|341886805|gb|EGT42740.1| hypothetical protein CAEBREN_23878 [Caenorhabditis brenneri]
          Length = 396

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 154/310 (49%), Gaps = 23/310 (7%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEE 705
           + + FK F  K GR++ + EE K RFE F+++  +  E        +YG ++FSD++  E
Sbjct: 84  LQQQFKDFNKKFGREHKSLEEYKMRFEVFQKNLREFEELNQKNPSVQYGINKFSDKTESE 143

Query: 706 I---LCKTGF---KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 759
           +   L    F     S  T + + + R     ++  V++    PD  DWR         D
Sbjct: 144 LKNLLMDKKFLDSSLSNSTLKTLSSYRNP-RNIIKNVQR----PDYIDWRNDGKVMSVKD 198

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA 819
           Q  CGSCWAF+    +E QYAI+ G L   S+ +LV+C     GC G F   ++ +    
Sbjct: 199 QGQCGSCWAFATVAAVESQYAIRKGTLWSLSEQELVDCDGASYGCGGGFLTSALGFILGN 258

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN- 878
           GLE+E DYPY     +  +C  +  K +++  + +      + + + +   GP+S  ++ 
Sbjct: 259 GLETEDDYPYSATKHD--QCWINGDKTRVWIDEGYQLTMSEDDVAEWVANVGPVSFAMSV 316

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
                 Y+      ++  C    LG HA+ ++GYG++    YW+V+NSWG    D+G+ +
Sbjct: 317 PKSFPAYHDGIYSPSEHECKDESLGYHAMAIIGYGQEGGQNYWIVKNSWGGSWGDQGYMR 376

Query: 938 IERGNNACGI 947
           + RG NACG+
Sbjct: 377 LARGVNACGM 386



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEE 339
           + + FK F  K GR++ + EE K RFE F+++  +  E        +YG ++FSD++  E
Sbjct: 84  LQQQFKDFNKKFGREHKSLEEYKMRFEVFQKNLREFEELNQKNPSVQYGINKFSDKTESE 143

Query: 340 I---LCKTGF---KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 393
           +   L    F     S  T + + + R     ++  V++    PD  DWR         D
Sbjct: 144 LKNLLMDKKFLDSSLSNSTLKTLSSYRNP-RNIIKNVQR----PDYIDWRNDGKVMSVKD 198

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ 453
           Q  CGSCWAF+    +E QYAI+ G L   S+ +LV+C     GCGG   L   + +   
Sbjct: 199 QGQCGSCWAFATVAAVESQYAIRKGTLWSLSEQELVDCDGASYGCGG-GFLTSALGFILG 257

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
            GLE+E DYPY     +  +C  +  K +++  + +      + + + +   GP+S  ++
Sbjct: 258 NGLETEDDYPYSATKHD--QCWINGDKTRVWIDEGYQLTMSEDDVAEWVANVGPVSFAMS 315

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
                  Y+      ++  C    LG HA+ ++GYG++    YW+ +NSWG    D+G+ 
Sbjct: 316 VPKSFPAYHDGIYSPSEHECKDESLGYHAMAIIGYGQEGGQNYWIVKNSWGGSWGDQGYM 375

Query: 572 KIERGNNACGI 582
           ++ RG NACG+
Sbjct: 376 RLARGVNACGM 386



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 4/207 (1%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           PD  DWR         DQ  CGSCWAF+    +E QYAI+ G L   S+ +LV+C     
Sbjct: 182 PDYIDWRNDGKVMSVKDQGQCGSCWAFATVAAVESQYAIRKGTLWSLSEQELVDCDGASY 241

Query: 72  GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           GC G F   ++ +    GLE+E DYPY     +  +C  +  K +++  + +      + 
Sbjct: 242 GCGGGFLTSALGFILGNGLETEDDYPYSATKHD--QCWINGDKTRVWIDEGYQLTMSEDD 299

Query: 132 MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYW 189
           + + +   GP+S  ++       Y+      ++  C    LG HA+ ++GYG++    YW
Sbjct: 300 VAEWVANVGPVSFAMSVPKSFPAYHDGIYSPSEHECKDESLGYHAMAIIGYGQEGGQNYW 359

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGI 216
           +V+NSWG    D+G+ ++ RG NACG+
Sbjct: 360 IVKNSWGGSWGDQGYMRLARGVNACGM 386



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 961  NDETCSPYDLG-HAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            ++  C    LG HA+ ++GYG++    YW+V+NSWG    D+G+ ++ RG NACG+
Sbjct: 331  SEHECKDESLGYHAMAIIGYGQEGGQNYWIVKNSWGGSWGDQGYMRLARGVNACGM 386


>gi|226476104|emb|CAX72142.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 158/319 (49%), Gaps = 31/319 (9%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKVIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + R+ ++         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPRVFSNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGL 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC G F + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGGGFMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSV-LLN 878
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SV ++ 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            D +  Y       N+  C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+
Sbjct: 254 LDSLTMYKSGVFESNE--CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKL 311

Query: 939 ERG-NNACGIEQIAGYATI 956
            R  +N CG+   A +  +
Sbjct: 312 RRNKHNMCGVASNASFPLL 330



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR         +Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSTWDWRDHGAVTAVKNQGLCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              +T++K +Y+YGP+SV ++  D +  Y       N+  C   D+ H VL+VGYGK+  
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESNE--CKYGDINHGVLVVGYGKEHG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 290 KDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 157/320 (49%), Gaps = 32/320 (10%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKVIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + R+ ++         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPRVFSNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGL 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGGCDGLEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GCGG   ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGG-GFMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN 513
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG+ 
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 514 S-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +   +  Y       N+  C   D+ H VL+VGYGK+    YWL +NSWG +   +G+FK
Sbjct: 253 ALDSLTMYKSGVFESNE--CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFK 310

Query: 573 IERG-NNACGIEQIAGYATI 591
           + R  +N CG+   A +  +
Sbjct: 311 LRRNKHNMCGVASNASFPLL 330



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|225458119|ref|XP_002279862.1| PREDICTED: cysteine proteinase RD19a [Vitis vinifera]
 gi|302142581|emb|CBI19784.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 156/338 (46%), Gaps = 48/338 (14%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 338
           N    F+ F  +  + YA  EE   RF  FK +    K+H+       +G ++FSD +P 
Sbjct: 47  NAERHFEKFKARFQKTYATPEEHDYRFNVFKANLRRAKRHQLLDPSAVHGVTQFSDLTPA 106

Query: 339 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           E           R Y  +   R   +     +     +P  +DWR+     P  +Q  CG
Sbjct: 107 EF---------RRDYLGLNPLRFPADAQQAPILPTDNLPTDFDWRENGAVTPVKNQGNCG 157

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEY 450
           SCW+FS  G LEG + + TG L   S+ QLV+C ++C       C  GC+G  +    EY
Sbjct: 158 SCWSFSTIGALEGAHFLATGNLESLSEQQLVDCDRECDPEEYDACDDGCNGGLMNNAFEY 217

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLS 509
             +  G+E EKDYPY     ++  C +++SK+        +     + +   L K GPL+
Sbjct: 218 ILKTGGVEREKDYPYT--GRDRSPCKFNESKIVASVSNFSVVSIDEDQIAANLVKNGPLA 275

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDDIPYWLAR 558
           VG+N+  +  Y             P+    +L H VLLVGYG       +  + PYW+ +
Sbjct: 276 VGINAVFMQTYTAG-------VSCPFLCSGELDHGVLLVGYGSAGYSPIRFKEKPYWILK 328

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQ 596
           NSW     + G+++I RG N CG++ +   +++   IQ
Sbjct: 329 NSWSKYWGEHGYYRICRGQNMCGVDSMV--SSVVAAIQ 364



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 149/327 (45%), Gaps = 47/327 (14%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 704
           N    F+ F  +  + YA  EE   RF  FK +    K+H+       +G ++FSD +P 
Sbjct: 47  NAERHFEKFKARFQKTYATPEEHDYRFNVFKANLRRAKRHQLLDPSAVHGVTQFSDLTPA 106

Query: 705 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           E           R Y  +   R   +     +     +P  +DWR+     P  +Q  CG
Sbjct: 107 EF---------RRDYLGLNPLRFPADAQQAPILPTDNLPTDFDWRENGAVTPVKNQGNCG 157

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCW+FS  G LEG + + TG L   S+ QLV+C ++C          GC+G     + EY
Sbjct: 158 SCWSFSTIGALEGAHFLATGNLESLSEQQLVDCDRECDPEEYDACDDGCNGGLMNNAFEY 217

Query: 816 THQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
             +  G+E EKDYPY     ++  C +++SK+        +     + +   L K GPL+
Sbjct: 218 ILKTGGVEREKDYPYTGR--DRSPCKFNESKIVASVSNFSVVSIDEDQIAANLVKNGPLA 275

Query: 875 VLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVR 923
           V +N+  +  Y             P+    +L H VLLVGYG       +    PYW+++
Sbjct: 276 VGINAVFMQTYTAG-------VSCPFLCSGELDHGVLLVGYGSAGYSPIRFKEKPYWILK 328

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQI 950
           NSW     + G+++I RG N CG++ +
Sbjct: 329 NSWSKYWGEHGYYRICRGQNMCGVDSM 355



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 32/241 (13%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+     P  +Q +CGSCW+FS  G LEG + + TG L   S+ QLV+C ++C
Sbjct: 135 LPTDFDWRENGAVTPVKNQGNCGSCWSFSTIGALEGAHFLATGNLESLSEQQLVDCDREC 194

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                     GC+G     + EY  +  G+E EKDYPY     ++  C +++SK+     
Sbjct: 195 DPEEYDACDDGCNGGLMNNAFEYILKTGGVEREKDYPYTGR--DRSPCKFNESKIVASVS 252

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPL+V +N+  +  Y             P+    +L H VL
Sbjct: 253 NFSVVSIDEDQIAANLVKNGPLAVGINAVFMQTYTAG-------VSCPFLCSGELDHGVL 305

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVI 229
           LVGYG       +    PYW+++NSW     + G+++I RG N CG++ +   +++   I
Sbjct: 306 LVGYGSAGYSPIRFKEKPYWILKNSWSKYWGEHGYYRICRGQNMCGVDSMV--SSVVAAI 363

Query: 230 Q 230
           Q
Sbjct: 364 Q 364


>gi|2677828|gb|AAB97142.1| cysteine protease [Prunus armeniaca]
          Length = 358

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 172/378 (45%), Gaps = 37/378 (9%)

Query: 595 IQRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENI 654
           + R+ L   A +++ A+   CG A+     S   R+    +  ++   ++      N   
Sbjct: 1   MARVTLVLSAALVLVAI--SCGAAASSFDESNPIRLVSDGLRELEQQVVQ---VLGNSRR 55

Query: 655 LETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEI 706
              F  F  + G++Y + EE+K R+E F ++       +KK   Y    + F+D S    
Sbjct: 56  ALHFARFAHRYGKKYESVEEMKLRYEIFSENKKLIRSTNKKGLPYTLAVNRFADWS---- 111

Query: 707 LCKTGFKWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
                  W E   +R+ A +      K   E+  D  +P++ +WR++ +  P  DQ  CG
Sbjct: 112 -------WEEFRRQRLGAAQNCSATTKGSHEL-TDAVLPESKNWREEGIVTPVKDQGHCG 163

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGL 821
           SCW FS  G LE  Y     K +  S+ QLV+CA   +  GC G     + EY  +  GL
Sbjct: 164 SCWTFSTTGALEAAYVQAFRKQISLSEQQLVDCAGAFNNFGCHGGLPSQAFEYIKYNGGL 223

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNSD 880
           ++E  YPY   +G    C +    V +       +     + +K  +    P+SV     
Sbjct: 224 DTEAAYPYVGTDG---ACKFSAENVGVQVLDSVNITLGDEQELKHAVAFVRPVSVAFQVV 280

Query: 881 LIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
                  + +  +D TC  SP D+ HAVL VGYG++  +P+WL++NSWG    D G+FK+
Sbjct: 281 KSFRIYKSGVYTSD-TCGSSPMDVNHAVLAVGYGEEGGVPFWLIKNSWGESWGDNGYFKM 339

Query: 939 ERGNNACGIEQIAGYATI 956
           E G N CG+   A Y  +
Sbjct: 340 EFGKNMCGVATCASYPIV 357



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 171/378 (45%), Gaps = 36/378 (9%)

Query: 229 IQRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENI 288
           + R+ L   A +++ A+   CG A+     S   R+    +  ++   ++      N   
Sbjct: 1   MARVTLVLSAALVLVAI--SCGAAASSFDESNPIRLVSDGLRELEQQVVQ---VLGNSRR 55

Query: 289 LETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEI 340
              F  F  + G++Y + EE+K R+E F ++       +KK   Y    + F+D S    
Sbjct: 56  ALHFARFAHRYGKKYESVEEMKLRYEIFSENKKLIRSTNKKGLPYTLAVNRFADWS---- 111

Query: 341 LCKTGFKWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
                  W E   +R+ A +      K   E+  D  +P++ +WR++ +  P  DQ  CG
Sbjct: 112 -------WEEFRRQRLGAAQNCSATTKGSHEL-TDAVLPESKNWREEGIVTPVKDQGHCG 163

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGL 456
           SCW FS  G LE  Y     K +  S+ QLV+CA   +  G   GL  Q  EY  +  GL
Sbjct: 164 SCWTFSTTGALEAAYVQAFRKQISLSEQQLVDCAGAFNNFGCHGGLPSQAFEYIKYNGGL 223

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSH 515
           ++E  YPY   +G    C +    V +          G E  +K  +    P+SV     
Sbjct: 224 DTEAAYPYVGTDG---ACKFSAENVGVQVLDSVNITLGDEQELKHAVAFVRPVSVAFQVV 280

Query: 516 LIHFYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
                  + +  +D TC  SP D+ HAVL VGYG++  +P+WL +NSWG    D G+FK+
Sbjct: 281 KSFRIYKSGVYTSD-TCGSSPMDVNHAVLAVGYGEEGGVPFWLIKNSWGESWGDNGYFKM 339

Query: 574 ERGNNACGIEQIAGYATI 591
           E G N CG+   A Y  +
Sbjct: 340 EFGKNMCGVATCASYPIV 357



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 112/224 (50%), Gaps = 10/224 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P++ +WR++ +  P  DQ  CGSCW FS  G LE  Y     K +  S+ QLV+CA
Sbjct: 138 DAVLPESKNWREEGIVTPVKDQGHCGSCWTFSTTGALEAAYVQAFRKQISLSEQQLVDCA 197

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF- 123
              +  GC G     + EY  +  GL++E  YPY   +G    C +    V +       
Sbjct: 198 GAFNNFGCHGGLPSQAFEYIKYNGGLDTEAAYPYVGTDG---ACKFSAENVGVQVLDSVN 254

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYG 181
           +     + +K  +    P+SV            + +  +D TC  SP D+ HAVL VGYG
Sbjct: 255 ITLGDEQELKHAVAFVRPVSVAFQVVKSFRIYKSGVYTSD-TCGSSPMDVNHAVLAVGYG 313

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           ++  +P+WL++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 314 EEGGVPFWLIKNSWGESWGDNGYFKMEFGKNMCGVATCASYPIV 357


>gi|1730100|sp|P36400.2|LMCPB_LEIME RecName: Full=Cysteine proteinase B; Flags: Precursor
 gi|899313|emb|CAA90236.1| LmCPb2.8 [Leishmania mexicana]
          Length = 443

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 138/301 (45%), Gaps = 22/301 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 94

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 95  -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C     GCDG     + ++  Q     L +E  
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDS 213

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+ + S++ +    D     GS  + M   L K GP+++ L++     
Sbjct: 214 YPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 272

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 273 YKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 328

Query: 945 C 945
           C
Sbjct: 329 C 329



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 139/302 (46%), Gaps = 23/302 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 94

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 95  -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C     GC G   L Q  ++  Q     L +E 
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLML-QAFDWLLQNTNGHLHTED 212

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+ + S++ +    D     GS  + M   L K GP+++ L++    
Sbjct: 213 SYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 271

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 272 SYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 327

Query: 579 AC 580
           AC
Sbjct: 328 AC 329



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMN 185

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GCDG     + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     
Sbjct: 186 DGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLI 244

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C    L H VLLVGY     
Sbjct: 245 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGE 300

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 301 VPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 31/50 (62%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
             C    L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  ACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|308476152|ref|XP_003100293.1| hypothetical protein CRE_21852 [Caenorhabditis remanei]
 gi|308265817|gb|EFP09770.1| hypothetical protein CRE_21852 [Caenorhabditis remanei]
          Length = 391

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 177/355 (49%), Gaps = 38/355 (10%)

Query: 616 GVASCLCLPSLTDRITDQVVARVDTL-AIEGSLTFDN----ENILETFKAFIVKRGRQYA 670
           G  +C C  ++   ++  V+A + TL  +     FD+    +   + F  FI+K  R+Y 
Sbjct: 42  GYKTCACDYAVIQMLSLVVLAVMLTLLGLFVYQLFDSKLEKQRYEQMFNDFILKYDRRYP 101

Query: 671 NDEEIKERFEYFKQDGHK----KHERYG----TSEFSDRSPEEILCKTGFKWSERTYERI 722
           + EE + R++ F Q+  +    + + +G     +EF+D + EE+             +RI
Sbjct: 102 SLEEFQYRYQVFLQNVKEFEAEEAKHFGLDLDVNEFTDWTNEEL-------------QRI 148

Query: 723 VADREKV-----EKMLME---VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGM 774
           V D + V     E++  E   +E     P + DWR +    P  +Q  CGSCWAF+    
Sbjct: 149 VYDNKNVKTDGSEEVRFEGSYLESGVKRPASIDWRDQGKLTPIKNQGQCGSCWAFATVAA 208

Query: 775 LEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANG 834
           +E Q+AI+  +LV  S+ ++V+C  + +GC G +   ++ +  + GLESEK+YPY     
Sbjct: 209 VEAQHAIRKNQLVSLSEQEMVDCDDKNNGCSGGYRPYAMRFVKENGLESEKEYPYSALKH 268

Query: 835 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKN 893
           +  +C   ++  ++F     +     E +   +   GP++  ++ +  ++ Y       +
Sbjct: 269 D--QCMLKQNDTRVFIDDFRMLSQNEEEIANWVGTKGPVTFGMSVTKAMYSYRSGIFNPS 326

Query: 894 DETCSPYDLG-HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
            + C+   +G HA+ +VGYG +    +W+V+NSWG      G+F++ RG N+CG+
Sbjct: 327 ADDCAEKSMGSHALTIVGYGGEGEAAFWIVKNSWGTSWGASGYFRLARGVNSCGL 381



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 176/356 (49%), Gaps = 39/356 (10%)

Query: 250 GVASCLCLPSLTDRITDQVVARVDTL-AIEGSLTFDN----ENILETFKAFIVKRGRQYA 304
           G  +C C  ++   ++  V+A + TL  +     FD+    +   + F  FI+K  R+Y 
Sbjct: 42  GYKTCACDYAVIQMLSLVVLAVMLTLLGLFVYQLFDSKLEKQRYEQMFNDFILKYDRRYP 101

Query: 305 NDEEIKERFEYFKQDGHK----KHERYG----TSEFSDRSPEEILCKTGFKWSERTYERI 356
           + EE + R++ F Q+  +    + + +G     +EF+D + EE+             +RI
Sbjct: 102 SLEEFQYRYQVFLQNVKEFEAEEAKHFGLDLDVNEFTDWTNEEL-------------QRI 148

Query: 357 VADREKV-----EKMLME---VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGM 408
           V D + V     E++  E   +E     P + DWR +    P  +Q  CGSCWAF+    
Sbjct: 149 VYDNKNVKTDGSEEVRFEGSYLESGVKRPASIDWRDQGKLTPIKNQGQCGSCWAFATVAA 208

Query: 409 LEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGN 468
           +E Q+AI+  +LV  S+ ++V+C  + +GC G       + +  + GLESEK+YPY    
Sbjct: 209 VEAQHAIRKNQLVSLSEQEMVDCDDKNNGCSG-GYRPYAMRFVKENGLESEKEYPYSALK 267

Query: 469 GEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN-SHLIHFYNGTPIRK 527
            +  +C   ++  ++F     +     E +   +   GP++ G++ +  ++ Y       
Sbjct: 268 HD--QCMLKQNDTRVFIDDFRMLSQNEEEIANWVGTKGPVTFGMSVTKAMYSYRSGIFNP 325

Query: 528 NDETCSPYDLG-HAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
           + + C+   +G HA+ +VGYG + +  +W+ +NSWG      G+F++ RG N+CG+
Sbjct: 326 SADDCAEKSMGSHALTIVGYGGEGEAAFWIVKNSWGTSWGASGYFRLARGVNSCGL 381



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 112/207 (54%), Gaps = 4/207 (1%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P + DWR +    P  +Q  CGSCWAF+    +E Q+AI+  +LV  S+ ++V+C  + +
Sbjct: 177 PASIDWRDQGKLTPIKNQGQCGSCWAFATVAAVEAQHAIRKNQLVSLSEQEMVDCDDKNN 236

Query: 72  GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           GC G +   ++ +  + GLESEK+YPY     +  +C   ++  ++F     +     E 
Sbjct: 237 GCSGGYRPYAMRFVKENGLESEKEYPYSALKHD--QCMLKQNDTRVFIDDFRMLSQNEEE 294

Query: 132 MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYW 189
           +   +   GP++  ++ +  ++ Y       + + C+   +G HA+ +VGYG +    +W
Sbjct: 295 IANWVGTKGPVTFGMSVTKAMYSYRSGIFNPSADDCAEKSMGSHALTIVGYGGEGEAAFW 354

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGI 216
           +V+NSWG      G+F++ RG N+CG+
Sbjct: 355 IVKNSWGTSWGASGYFRLARGVNSCGL 381



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 1/52 (1%)

Query: 965  CSPYDLG-HAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            C+   +G HA+ +VGYG + +  +W+V+NSWG      G+F++ RG N+CG+
Sbjct: 330  CAEKSMGSHALTIVGYGGEGEAAFWIVKNSWGTSWGASGYFRLARGVNSCGL 381


>gi|157864853|ref|XP_001681135.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|157864857|ref|XP_001681137.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124429|emb|CAJ02285.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124431|emb|CAJ02287.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 443

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 139/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|13774082|gb|AAK38169.1| cathepsin L-like [Fasciola hepatica]
          Length = 310

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 92  VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 151

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y++   V   TG   +H  
Sbjct: 152 GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNRQLGVAKVTGYYTVHSG 208

Query: 128 GSETMKKILYKYGP--LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++    P  ++V + SD +   +G       +TC P+ L HAVL VGYG QD 
Sbjct: 209 SEVELKNLVGSRRPAAIAVDVESDFMMYRSGI---YQSQTCLPFALNHAVLAVGYGTQDG 265

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YW+V+NSWG    + G+ ++ R   N CGI  +A    +
Sbjct: 266 TDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLASLPMV 306



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 92  VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 151

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y++   V   TG   +H  
Sbjct: 152 GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNRQLGVAKVTGYYTVHSG 208

Query: 859 GSETMKKILYKYGP--LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++    P  ++V + SD +   +G       +TC P+ L HAVL VGYG QD 
Sbjct: 209 SEVELKNLVGSRRPAAIAVDVESDFMMYRSGI---YQSQTCLPFALNHAVLAVGYGTQDG 265

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
             YW+V+NSWG    + G+ ++ R   N CGI  +A    +
Sbjct: 266 TDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLASLPMV 306



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 115/223 (51%), Gaps = 15/223 (6%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 92  VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 151

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC G  +E   +Y  Q GLE+E  YPY    G+   C Y++   V   TG  +   
Sbjct: 152 -GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNRQLGVAKVTGY-YTVH 206

Query: 493 NGSET-MKKILYKYGP--LSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           +GSE  +K ++    P  ++V + S  + + +G       +TC P+ L HAVL VGYG Q
Sbjct: 207 SGSEVELKNLVGSRRPAAIAVDVESDFMMYRSGI---YQSQTCLPFALNHAVLAVGYGTQ 263

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           D   YW+ +NSWG    + G+ ++ R   N CGI  +A    +
Sbjct: 264 DGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLASLPMV 306



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            +   +TC P+ L HAVL VGYG QD   YW+V+NSWG    + G+ ++ R   N CGI  
Sbjct: 240  IYQSQTCLPFALNHAVLAVGYGTQDGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIAS 299

Query: 1018 IAGYATI 1024
            +A    +
Sbjct: 300  LASLPMV 306


>gi|4139678|pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1
           Angstrom Resolution: Location Of The Mini-Chain
           C-Terminal Carboxyl Group Defines Cathepsin H
           Aminopeptidase Function
 gi|28948781|pdb|1NB3|A Chain A, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948784|pdb|1NB3|B Chain B, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948787|pdb|1NB3|C Chain C, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948790|pdb|1NB3|D Chain D, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948793|pdb|1NB5|A Chain A, Crystal Structure Of Stefin A In Complex With Cathepsin H
 gi|28948796|pdb|1NB5|B Chain B, Crystal Structure Of Stefin A In Complex With Cathepsin H
 gi|28948799|pdb|1NB5|C Chain C, Crystal Structure Of Stefin A In Complex With Cathepsin H
 gi|28948802|pdb|1NB5|D Chain D, Crystal Structure Of Stefin A In Complex With Cathepsin H
          Length = 220

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 119/223 (53%), Gaps = 21/223 (9%)

Query: 743 PDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           P + DWRKK N   P  +Q +CGSCW FS  G LE   AI TGK++  ++ QLV+CA+  
Sbjct: 2   PPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNF 61

Query: 802 S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LH 856
           +  GC G     + EY  +  G+  E  YPYK   G+   C +   K   F  KD   + 
Sbjct: 62  NNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-KDVANIT 117

Query: 857 FNGSETMKKILYKYGPLSV---LLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVG 910
            N  E M + +  Y P+S    + N  L++    Y+ T   K     +P  + HAVL VG
Sbjct: 118 MNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNHAVLAVG 172

Query: 911 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
           YG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 173 YGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 215



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 118/223 (52%), Gaps = 21/223 (9%)

Query: 12  PDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA+  
Sbjct: 2   PPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNF 61

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LH 125
           +  GC G     + EY  +  G+  E  YPYK   G+   C +   K   F  KD   + 
Sbjct: 62  NNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-KDVANIT 117

Query: 126 FNGSETMKKILYKYGPLSV---LLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVG 179
            N  E M + +  Y P+S    + N  L++    Y+ T   K     +P  + HAVL VG
Sbjct: 118 MNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNHAVLAVG 172

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           YG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 173 YGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 215



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 117/223 (52%), Gaps = 20/223 (8%)

Query: 377 PDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           P + DWRKK N   P  +Q +CGSCW FS  G LE   AI TGK++  ++ QLV+CA+  
Sbjct: 2   PPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNF 61

Query: 436 SGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LY 491
           +  G   GL  Q  EY  +  G+  E  YPY+   G+   C +   K   F  KD   + 
Sbjct: 62  NNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-KDVANIT 117

Query: 492 FNGSETMKKILYKYGPLSVGL---NSHLIH---FYNGTPIRKNDETCSPYDLGHAVLLVG 545
            N  E M + +  Y P+S      N  L++    Y+ T   K     +P  + HAVL VG
Sbjct: 118 MNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNHAVLAVG 172

Query: 546 YGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
           YG+++ IPYW+ +NSWGP     G+F IERG N CG+   A Y
Sbjct: 173 YGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 215



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 160  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 215


>gi|355681653|gb|AER96814.1| cathepsin K [Mustela putorius furo]
          Length = 329

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 154/326 (47%), Gaps = 28/326 (8%)

Query: 645 GSLTFDNENILET-FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHERYGTS------ 696
            S+    E IL+T ++ +    G+QY N  +EI  R  + K   H        S      
Sbjct: 13  ASIALYPEEILDTQWELWKKTYGKQYNNKVDEISRRLIWEKNLKHISIHNLEASLGVHTY 72

Query: 697 -----EFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK 750
                   D + EE++ K TG K        +     +    L   + +   PD+ D+RK
Sbjct: 73  ELAMNHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDSLYIPDWESRAPDSIDYRK 124

Query: 751 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFE 810
           K    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +  
Sbjct: 125 KGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMT 184

Query: 811 PSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILY 868
            + +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + 
Sbjct: 185 NAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCKGYREIPEGNEKALKRAVA 241

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
           + GP+SV +++ L      +     DE C+  +L HAVL VGYG Q    +W+++NSWG 
Sbjct: 242 RVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGVQKGNKHWIIKNSWGE 301

Query: 929 IGPDEGFFKIERG-NNACGIEQIAGY 953
              ++G+  + R  NNACGI  +A +
Sbjct: 302 NWGNKGYILMARNKNNACGIANLASF 327



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 154/327 (47%), Gaps = 29/327 (8%)

Query: 279 GSLTFDNENILET-FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHERYGTS------ 330
            S+    E IL+T ++ +    G+QY N  +EI  R  + K   H        S      
Sbjct: 13  ASIALYPEEILDTQWELWKKTYGKQYNNKVDEISRRLIWEKNLKHISIHNLEASLGVHTY 72

Query: 331 -----EFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK 384
                   D + EE++ K TG K        +     +    L   + +   PD+ D+RK
Sbjct: 73  ELAMNHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDSLYIPDWESRAPDSIDYRK 124

Query: 385 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL 444
           K    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +
Sbjct: 125 KGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYM 183

Query: 445 EQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKIL 502
               +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ +
Sbjct: 184 TNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCKGYREIPEGNEKALKRAV 240

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWG 562
            + GP+SV +++ L  F   +     DE C+  +L HAVL VGYG Q    +W+ +NSWG
Sbjct: 241 ARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGVQKGNKHWIIKNSWG 300

Query: 563 PIGPDEGFFKIERG-NNACGIEQIAGY 588
               ++G+  + R  NNACGI  +A +
Sbjct: 301 ENWGNKGYILMARNKNNACGIANLASF 327



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 116/215 (53%), Gaps = 6/215 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  + 
Sbjct: 116 APDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 175

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 128
            GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   +    
Sbjct: 176 DGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCKGYREIPEGN 232

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL VGYG Q    +
Sbjct: 233 EKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGVQKGNKH 292

Query: 189 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 222
           W+++NSWG    ++G+  + R  NNACGI  +A +
Sbjct: 293 WIIKNSWGENWGNKGYILMARNKNNACGIANLASF 327



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 267  DENCNSDNLNHAVLAVGYGVQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 326

Query: 1021 Y 1021
            +
Sbjct: 327  F 327


>gi|41152538|gb|AAR99518.1| cathepsin L protein [Fasciola hepatica]
          Length = 326

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 113/216 (52%), Gaps = 12/216 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y++   V   TG   +H  
Sbjct: 168 GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNEQLGVAKVTGYYTVHSG 224

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++   GP +V ++  SD +   +G       +TCSP  + HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGSEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLSVNHAVLAVGYGTQGG 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 317



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 112/216 (51%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y++   V   TG   +H  
Sbjct: 168 GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNEQLGVAKVTGYYTVHSG 224

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++   GP +V ++  SD +   +G       +TCSP  + HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGSEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLSVNHAVLAVGYGTQGG 281

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 317



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 114/218 (52%), Gaps = 15/218 (6%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC G  +E   +Y  Q GLE+E  YPY    G+   C Y++   V   TG  +   
Sbjct: 168 -GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNEQLGVAKVTGY-YTVH 222

Query: 493 NGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           +GSE  +K ++   GP +V ++  S  + + +G       +TCSP  + HAVL VGYG Q
Sbjct: 223 SGSEVELKNLVGSEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLSVNHAVLAVGYGTQ 279

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
               YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 280 GGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 317



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            +   +TCSP  + HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  
Sbjct: 256  IYQSQTCSPLSVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIAS 315

Query: 1018 IA 1019
            +A
Sbjct: 316  LA 317


>gi|401416324|ref|XP_003872657.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488881|emb|CBZ24131.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 443

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 138/301 (45%), Gaps = 22/301 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 94

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 95  -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C     GCDG     + ++  Q     L +E  
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDS 213

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+ + S++ +    D     GS  + M   L K GP+++ L++     
Sbjct: 214 YPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 272

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 273 YKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 328

Query: 945 C 945
           C
Sbjct: 329 C 329



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 139/302 (46%), Gaps = 23/302 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 94

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 95  -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C     GC G   L Q  ++  Q     L +E 
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLML-QAFDWLLQNTNGHLHTED 212

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+ + S++ +    D     GS  + M   L K GP+++ L++    
Sbjct: 213 SYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 271

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 272 SYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 327

Query: 579 AC 580
           AC
Sbjct: 328 AC 329



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMN 185

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GCDG     + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     
Sbjct: 186 DGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLI 244

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C    L H VLLVGY     
Sbjct: 245 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGE 300

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 301 VPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 31/50 (62%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
             C    L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  ACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|195150387|ref|XP_002016136.1| GL11434 [Drosophila persimilis]
 gi|194109983|gb|EDW32026.1| GL11434 [Drosophila persimilis]
          Length = 372

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 154/314 (49%), Gaps = 32/314 (10%)

Query: 655 LETFKAFIVKRGRQY--ANDEEIKERFEYFKQD----GHKKHERYGTS------EFSDRS 702
           ++ F  F+ + G+ Y  A D+ + E     +++    G+    +  +S       FSD +
Sbjct: 61  VQNFGDFLAQSGKNYLSAADKALHEGVFAARKNLVDAGNDAFAKGASSYQLAVNAFSDLT 120

Query: 703 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
             E L + TG + S +   +  A+R+     L  V     +P+++DWR+K        Q 
Sbjct: 121 KSEFLSQLTGLRKSSQGASKATANRK-----LASVPAGASIPESFDWRQKGGVTSVKFQG 175

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK---QCSGCDGCFFEPSIEYTH- 817
            CGSCWAF+  G +EG    KTG L   S+  LV+C       SGCDG F E ++ + + 
Sbjct: 176 TCGSCWAFATTGAIEGHIFRKTGTLPNLSEQNLVDCGTLEFGLSGCDGGFQEYAMAFINE 235

Query: 818 -QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSV 875
            Q G+     YPY +    K  C Y K+      TG   +       MKK++   GPL+ 
Sbjct: 236 EQKGVSKADGYPYID---NKDTCKYSKNLSGAQITGFATIPPKDETLMKKVIATLGPLAC 292

Query: 876 LLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            LN    L+   +G     +DE C+  +  H+VL+VGYG +    YW+V+NSW  +  +E
Sbjct: 293 SLNGLETLLQYKSGI---YSDEKCNEGEPNHSVLVVGYGSEKGQDYWIVKNSWDKVWGEE 349

Query: 934 GFFKIERGNNACGI 947
           G+F++ RGNN CGI
Sbjct: 350 GYFRLPRGNNFCGI 363



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 151/316 (47%), Gaps = 35/316 (11%)

Query: 289 LETFKAFIVKRGRQY--ANDEEIKERFEYFKQD----GHKKHERYGTS------EFSDRS 336
           ++ F  F+ + G+ Y  A D+ + E     +++    G+    +  +S       FSD +
Sbjct: 61  VQNFGDFLAQSGKNYLSAADKALHEGVFAARKNLVDAGNDAFAKGASSYQLAVNAFSDLT 120

Query: 337 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
             E L + TG + S +   +  A+R+     L  V     +P+++DWR+K        Q 
Sbjct: 121 KSEFLSQLTGLRKSSQGASKATANRK-----LASVPAGASIPESFDWRQKGGVTSVKFQG 175

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---- 451
            CGSCWAF+  G +EG    KTG L   S+  LV+C     G  GCDG  Q  EY     
Sbjct: 176 TCGSCWAFATTGAIEGHIFRKTGTLPNLSEQNLVDCGTLEFGLSGCDGGFQ--EYAMAFI 233

Query: 452 --HQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYGPL 508
              Q G+     YPY +    K  C Y K+      TG   +       MKK++   GPL
Sbjct: 234 NEEQKGVSKADGYPYID---NKDTCKYSKNLSGAQITGFATIPPKDETLMKKVIATLGPL 290

Query: 509 SVGLNS--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           +  LN    L+ + +G     +DE C+  +  H+VL+VGYG +    YW+ +NSW  +  
Sbjct: 291 ACSLNGLETLLQYKSGI---YSDEKCNEGEPNHSVLVVGYGSEKGQDYWIVKNSWDKVWG 347

Query: 567 DEGFFKIERGNNACGI 582
           +EG+F++ RGNN CGI
Sbjct: 348 EEGYFRLPRGNNFCGI 363



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 115/223 (51%), Gaps = 14/223 (6%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           L  V     +P+++DWR+K        Q  CGSCWAF+  G +EG    KTG L   S+ 
Sbjct: 147 LASVPAGASIPESFDWRQKGGVTSVKFQGTCGSCWAFATTGAIEGHIFRKTGTLPNLSEQ 206

Query: 62  QLVECAK---QCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANGEKFKCAYDKS-KV 115
            LV+C       SGCDG F E ++ + +  Q G+     YPY +    K  C Y K+   
Sbjct: 207 NLVDCGTLEFGLSGCDGGFQEYAMAFINEEQKGVSKADGYPYID---NKDTCKYSKNLSG 263

Query: 116 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGH 173
              TG   +       MKK++   GPL+  LN    L+   +G     +DE C+  +  H
Sbjct: 264 AQITGFATIPPKDETLMKKVIATLGPLACSLNGLETLLQYKSGI---YSDEKCNEGEPNH 320

Query: 174 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           +VL+VGYG +    YW+V+NSW  +  +EG+F++ RGNN CGI
Sbjct: 321 SVLVVGYGSEKGQDYWIVKNSWDKVWGEEGYFRLPRGNNFCGI 363



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 2/70 (2%)

Query: 946  GIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFK 1005
            G+E +  Y +   + +DE C+  +  H+VL+VGYG +    YW+V+NSW  +  +EG+F+
Sbjct: 296  GLETLLQYKS--GIYSDEKCNEGEPNHSVLVVGYGSEKGQDYWIVKNSWDKVWGEEGYFR 353

Query: 1006 IERGNNACGI 1015
            + RGNN CGI
Sbjct: 354  LPRGNNFCGI 363


>gi|33112583|gb|AAP94047.1| cathepsin-L-like cysteine peptidase 03 [Tenebrio molitor]
          Length = 337

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 165/325 (50%), Gaps = 32/325 (9%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 701
           + E + AF +   +QY +D E + R + F ++ H   KH +           G ++++D 
Sbjct: 23  VQEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 702 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
              E +    GF    RT   + +  E  + +      +  +P   DWR K    P  DQ
Sbjct: 83  LHHEFVQVLNGFN---RTKSGLRSG-ESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQ 138

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTH- 817
             CGSCW+FS  G LEGQ+  K+GKLV  S+  LV+C+++   +GC+G   + +  Y   
Sbjct: 139 GQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKA 198

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYGPLSV 875
             G+++E+ YPYK    E  KC Y K K K  T + ++   +G+E  ++  +   GP+SV
Sbjct: 199 NGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSV 254

Query: 876 LLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPD 932
            +++       Y+G    + D  CS   L H VL+VGYG +D+   YWLV+NSWG    D
Sbjct: 255 AIDASHQSFQLYSGGVYYEPD--CSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGD 312

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+ K+ R  +N CGI   A Y  +
Sbjct: 313 QGYIKMARNRDNNCGIATEASYPLV 337



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 165/326 (50%), Gaps = 33/326 (10%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 335
           + E + AF +   +QY +D E + R + F ++ H   KH +           G ++++D 
Sbjct: 23  VQEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 336 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
              E +    GF    RT   + +  E  + +      +  +P   DWR K    P  DQ
Sbjct: 83  LHHEFVQVLNGFN---RTKSGLRSG-ESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQ 138

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCW+FS  G LEGQ+  K+GKLV  S+  LV+C+++  G  GC+G  ++    Y  
Sbjct: 139 GQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKF-GNNGCNGGLMDNAFRYIK 197

Query: 453 -QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSE-TMKKILYKYGPLS 509
              G+++E+ YPY+    E  KC Y K K K  T + ++   +G+E  ++  +   GP+S
Sbjct: 198 ANGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVS 253

Query: 510 VGLNSHLIHF--YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGP 566
           V +++    F  Y+G    + D  CS   L H VL+VGYG +DD   YWL +NSWG    
Sbjct: 254 VAIDASHQSFQLYSGGVYYEPD--CSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWG 311

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           D+G+ K+ R  +N CGI   A Y  +
Sbjct: 312 DQGYIKMARNRDNNCGIATEASYPLV 337



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 15/224 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P   DWR K    P  DQ  CGSCW+FS  G LEGQ+  K+GKLV  S+  LV+C+++ 
Sbjct: 120 LPGQIDWRDKGAVTPVKDQGQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKF 179

Query: 71  --SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + +  Y     G+++E+ YPYK    E  KC Y K K K  T + ++   
Sbjct: 180 GNNGCNGGLMDNAFRYIKANGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGYVDIE 235

Query: 127 NGSE-TMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +G+E  ++  +   GP+SV +++       Y+G    + D  CS   L H VL+VGYG +
Sbjct: 236 SGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPD--CSASQLDHGVLVVGYGTE 293

Query: 184 DN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           D+   YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 294 DDGTDYWLVKNSWGKSWGDQGYIKMARNRDNNCGIATEASYPLV 337



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 51/110 (46%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D G+  IE GN       +A    + V               V  +  CS   L H VL+
Sbjct: 228  DRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPDCSASQLDHGVLV 287

Query: 977  VGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG +DD   YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 288  VGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNRDNNCGIATEASYPLV 337


>gi|1848231|gb|AAB48120.1| cathepsin L-like protease [Leishmania major]
          Length = 443

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 139/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|288548566|gb|ADC52431.1| cathepsin L2 cysteine protease [Pinctada fucata]
          Length = 330

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 149/325 (45%), Gaps = 34/325 (10%)

Query: 649 FDNENILETFKAFIVKRGRQYANDEEIKERFEY-----------FKQDGHKKHERYGTSE 697
            DNE     +  F  +  + Y N+EE + R  +              D  +     G +E
Sbjct: 23  LDNE-----WNIFKKQYNKLYQNEEEARRRLVWESNLDFITLHNLAADRGEHTFWVGMNE 77

Query: 698 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
           + D + EE      G++   +T    V          M     G +PD  DWR K    P
Sbjct: 78  YGDMTNEEFTKTMNGYRMRNKTSNAPV---------FMPPNNMGDLPDTVDWRPKGYVTP 128

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIE 814
             +Q  CGSCW+FS  G LEGQ   KTGKLV  S+  LV+C+K+    GC+G   + +  
Sbjct: 129 IKNQGQCGSCWSFSATGSLEGQTFKKTGKLVSLSEQNLVDCSKKQGNHGCEGGLMDDAFT 188

Query: 815 YTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGP 872
           Y     G+++E  YPYK  +G   KC +  + V    TG   +     E +K+ +   GP
Sbjct: 189 YIKANNGIDTEASYPYKARDG---KCEFKSADVGATDTGFVDIKTKDEEALKQAVATVGP 245

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++  +          +D  CS   L H VL VGYG +D+  YWLV+NSWG     
Sbjct: 246 ISVAIDASHMSFQLYRTGVYHDWFCSQTKLDHGVLAVGYGTEDSKDYWLVKNSWGESWGQ 305

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+ ++ R   N CGI   A Y T+
Sbjct: 306 KGYIQMSRNRRNNCGIATSASYPTV 330



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 149/326 (45%), Gaps = 35/326 (10%)

Query: 283 FDNENILETFKAFIVKRGRQYANDEEIKERFEY-----------FKQDGHKKHERYGTSE 331
            DNE     +  F  +  + Y N+EE + R  +              D  +     G +E
Sbjct: 23  LDNE-----WNIFKKQYNKLYQNEEEARRRLVWESNLDFITLHNLAADRGEHTFWVGMNE 77

Query: 332 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
           + D + EE      G++   +T    V          M     G +PD  DWR K    P
Sbjct: 78  YGDMTNEEFTKTMNGYRMRNKTSNAPV---------FMPPNNMGDLPDTVDWRPKGYVTP 128

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY 450
             +Q  CGSCW+FS  G LEGQ   KTGKLV  S+  LV+C+K+  G  GC+G      +
Sbjct: 129 IKNQGQCGSCWSFSATGSLEGQTFKKTGKLVSLSEQNLVDCSKK-QGNHGCEGGLMDDAF 187

Query: 451 TH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLYFNGSETMKKILYKYG 506
           T+     G+++E  YPY+  +G   KC +  + V    TG   +     E +K+ +   G
Sbjct: 188 TYIKANNGIDTEASYPYKARDG---KCEFKSADVGATDTGFVDIKTKDEEALKQAVATVG 244

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++  + F        +D  CS   L H VL VGYG +D   YWL +NSWG    
Sbjct: 245 PISVAIDASHMSFQLYRTGVYHDWFCSQTKLDHGVLAVGYGTEDSKDYWLVKNSWGESWG 304

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
            +G+ ++ R   N CGI   A Y T+
Sbjct: 305 QKGYIQMSRNRRNNCGIATSASYPTV 330



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 119/230 (51%), Gaps = 8/230 (3%)

Query: 1   MLMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
           + M     G +PD  DWR K    P  +Q  CGSCW+FS  G LEGQ   KTGKLV  S+
Sbjct: 104 VFMPPNNMGDLPDTVDWRPKGYVTPIKNQGQCGSCWSFSATGSLEGQTFKKTGKLVSLSE 163

Query: 61  SQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKL 117
             LV+C+K+    GC+G   + +  Y     G+++E  YPYK  +G   KC +  + V  
Sbjct: 164 QNLVDCSKKQGNHGCEGGLMDDAFTYIKANNGIDTEASYPYKARDG---KCEFKSADVGA 220

Query: 118 F-TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 176
             TG   +     E +K+ +   GP+SV +++  +          +D  CS   L H VL
Sbjct: 221 TDTGFVDIKTKDEEALKQAVATVGPISVAIDASHMSFQLYRTGVYHDWFCSQTKLDHGVL 280

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            VGYG +D+  YWLV+NSWG     +G+ ++ R   N CGI   A Y T+
Sbjct: 281 AVGYGTEDSKDYWLVKNSWGESWGQKGYIQMSRNRRNNCGIATSASYPTV 330



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V +D  CS   L H VL VGYG +D   YWLV+NSWG     +G+ ++ R   N CGI  
Sbjct: 264  VYHDWFCSQTKLDHGVLAVGYGTEDSKDYWLVKNSWGESWGQKGYIQMSRNRRNNCGIAT 323

Query: 1018 IAGYATI 1024
             A Y T+
Sbjct: 324  SASYPTV 330


>gi|129353|sp|P22895.1|P34_SOYBN RecName: Full=P34 probable thiol protease; Flags: Precursor
          Length = 379

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 162/329 (49%), Gaps = 34/329 (10%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----------KKHERYGTSEFSD 334
           + +   F+ +  + GR Y N EE  +R E FK + +               R G ++F+D
Sbjct: 38  KQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFAD 97

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            +P+E   K   +  +   ++I    +K++K   +   D P P +WDWRKK V      Q
Sbjct: 98  ITPQE-FSKKYLQAPKDVSQQIKMANKKMKKE--QYSCDHP-PASWDWRKKGVITQVKYQ 153

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE-QPIEYT-H 452
             CG  WAFS  G +E  +AI TG LV  S+ +LV+C ++  G    +G + Q  E+   
Sbjct: 154 GGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESEGS--YNGWQYQSFEWVLE 211

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNG----SETMKKILYKY-- 505
             G+ ++ DYPYR   G   +C  +K + K+   G + L  +     SET +  L     
Sbjct: 212 HGGIATDDDYPYRAKEG---RCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILE 268

Query: 506 GPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
            P+SV +++   H Y G  I   +   SPY + H VLLVGYG  D + YW+A+NSWG   
Sbjct: 269 QPISVSIDAKDFHLYTGG-IYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGFDW 327

Query: 566 PDEGFFKIER--GN--NACGIEQIAGYAT 590
            ++G+  I+R  GN    CG+   A Y T
Sbjct: 328 GEDGYIWIQRNTGNLLGVCGMNYFASYPT 356



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 159/327 (48%), Gaps = 31/327 (9%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----------KKHERYGTSEFSD 700
           + +   F+ +  + GR Y N EE  +R E FK + +               R G ++F+D
Sbjct: 38  KQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFAD 97

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            +P+E   K   +  +   ++I    +K++K   +   D P P +WDWRKK V      Q
Sbjct: 98  ITPQE-FSKKYLQAPKDVSQQIKMANKKMKKE--QYSCDHP-PASWDWRKKGVITQVKYQ 153

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQA 819
             CG  WAFS  G +E  +AI TG LV  S+ +LV+C ++  G    +   S E+     
Sbjct: 154 GGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESEGSYNGWQYQSFEWVLEHG 213

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG----SETMKKILYKY--GP 872
           G+ ++ DYPY+   G   +C  +K + K+   G + L  +     SET +  L      P
Sbjct: 214 GIATDDDYPYRAKEG---RCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQP 270

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++   H Y G  I   +   SPY + H VLLVGYG  D + YW+ +NSWG    +
Sbjct: 271 ISVSIDAKDFHLYTGG-IYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGFDWGE 329

Query: 933 EGFFKIER--GN--NACGIEQIAGYAT 955
           +G+  I+R  GN    CG+   A Y T
Sbjct: 330 DGYIWIQRNTGNLLGVCGMNYFASYPT 356



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 117/229 (51%), Gaps = 17/229 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D P P +WDWRKK V      Q  CG  WAFS  G +E  +AI TG LV  S+ +LV+C 
Sbjct: 133 DHP-PASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCV 191

Query: 68  KQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLH 125
           ++  G    +   S E+     G+ ++ DYPY+   G   +C  +K + K+   G + L 
Sbjct: 192 EESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEG---RCKANKIQDKVTIDGYETLI 248

Query: 126 FNG----SETMKKILYKY--GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
            +     SET +  L      P+SV +++   H Y G  I   +   SPY + H VLLVG
Sbjct: 249 MSDESTESETEQAFLSAILEQPISVSIDAKDFHLYTGG-IYDGENCTSPYGINHFVLLVG 307

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIER--GN--NACGIEQIAGYAT 224
           YG  D + YW+ +NSWG    ++G+  I+R  GN    CG+   A Y T
Sbjct: 308 YGSADGVDYWIAKNSWGFDWGEDGYIWIQRNTGNLLGVCGMNYFASYPT 356



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 5/70 (7%)

Query: 959  VKNDETC-SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER--GN--NAC 1013
            + + E C SPY + H VLLVGYG  D + YW+ +NSWG    ++G+  I+R  GN    C
Sbjct: 287  IYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGFDWGEDGYIWIQRNTGNLLGVC 346

Query: 1014 GIEQIAGYAT 1023
            G+   A Y T
Sbjct: 347  GMNYFASYPT 356


>gi|148907299|gb|ABR16787.1| unknown [Picea sitchensis]
          Length = 372

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 154/306 (50%), Gaps = 20/306 (6%)

Query: 665 RGRQYANDEEIKERFEYFKQ-----DGHKKHE---RYGTSEFSDRSPEEILCKTGFKWSE 716
           R  +  + +E   RFE FK+     D   K +   + G ++F+D S EE          E
Sbjct: 53  RSTRSLDSDEHARRFEIFKENVKHIDSVNKKDGPYKLGLNKFADLSNEEFKAMHMTTKME 112

Query: 717 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 776
           + ++ +  DR  VE      +    +P + DWRKK    P  +Q  CGSCWAFS    +E
Sbjct: 113 K-HKSLRGDR-GVESGSFMYQNSKRLPASIDWRKKGAVTPVKNQGQCGSCWAFSTIASVE 170

Query: 777 GQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGE 835
           G   IKTGKLV  S+ QLV+C+K+ +GC+G   + + +Y     G+ +E +YPY    GE
Sbjct: 171 GINYIKTGKLVSLSEQQLVDCSKENAGCNGGLMDNAFQYIIDNGGIVTEDEYPYTAEAGE 230

Query: 836 KFKCAYD-KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 894
                 + KS   +  G + +  N    +KK +  + P+S+ + +   HD+         
Sbjct: 231 CSTTKIESKSIATIIDGFEDVPANNEGALKKAV-AHQPVSIAIEASG-HDFQFYSTGVFT 288

Query: 895 ETCSPYDLGHAVLLVGYGKQ-DNIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQ 949
             C   +L H V++VGYGK  + I YW+VRNSWGP   ++G+ +++RG  A    CGI  
Sbjct: 289 GKCGT-ELDHGVVVVGYGKSPEGINYWIVRNSWGPEWGEQGYIRMQRGIEATEGKCGISM 347

Query: 950 IAGYAT 955
            A Y T
Sbjct: 348 QASYPT 353



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 120/221 (54%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P + DWRKK    P  +Q  CGSCWAFS    +EG   IKTGKLV  S+ QLV+C+K+ 
Sbjct: 136 LPASIDWRKKGAVTPVKNQGQCGSCWAFSTIASVEGINYIKTGKLVSLSEQQLVDCSKEN 195

Query: 71  SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNG 128
           +GC+G   + + +Y     G+ +E +YPY    GE      + KS   +  G + +  N 
Sbjct: 196 AGCNGGLMDNAFQYIIDNGGIVTEDEYPYTAEAGECSTTKIESKSIATIIDGFEDVPANN 255

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DNIP 187
              +KK +  + P+S+ + +   HD+           C   +L H V++VGYGK  + I 
Sbjct: 256 EGALKKAV-AHQPVSIAIEASG-HDFQFYSTGVFTGKCGT-ELDHGVVVVGYGKSPEGIN 312

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYAT 224
           YW+VRNSWGP   ++G+ +++RG  A    CGI   A Y T
Sbjct: 313 YWIVRNSWGPEWGEQGYIRMQRGIEATEGKCGISMQASYPT 353



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 153/309 (49%), Gaps = 25/309 (8%)

Query: 299 RGRQYANDEEIKERFEYFKQ-----DGHKKHE---RYGTSEFSDRSPEEILCKTGFKWSE 350
           R  +  + +E   RFE FK+     D   K +   + G ++F+D S EE          E
Sbjct: 53  RSTRSLDSDEHARRFEIFKENVKHIDSVNKKDGPYKLGLNKFADLSNEEFKAMHMTTKME 112

Query: 351 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 410
           + ++ +  DR  VE      +    +P + DWRKK    P  +Q  CGSCWAFS    +E
Sbjct: 113 K-HKSLRGDR-GVESGSFMYQNSKRLPASIDWRKKGAVTPVKNQGQCGSCWAFSTIASVE 170

Query: 411 GQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY-THQAGLESEKDYPYRNGNG 469
           G   IKTGKLV  S+ QLV+C+K+ +GC G   ++   +Y     G+ +E +YPY    G
Sbjct: 171 GINYIKTGKLVSLSEQQLVDCSKENAGCNG-GLMDNAFQYIIDNGGIVTEDEYPYTAEAG 229

Query: 470 EKFKCAYD-KSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS--HLIHFYNGTPIR 526
           E      + KS   +  G + +  N    +KK +  + P+S+ + +  H   FY+     
Sbjct: 230 ECSTTKIESKSIATIIDGFEDVPANNEGALKKAV-AHQPVSIAIEASGHDFQFYSTGVFT 288

Query: 527 KNDETCSPYDLGHAVLLVGYGKQ-DDIPYWLARNSWGPIGPDEGFFKIERGNNA----CG 581
               T    +L H V++VGYGK  + I YW+ RNSWGP   ++G+ +++RG  A    CG
Sbjct: 289 GKCGT----ELDHGVVVVGYGKSPEGINYWIVRNSWGPEWGEQGYIRMQRGIEATEGKCG 344

Query: 582 IEQIAGYAT 590
           I   A Y T
Sbjct: 345 ISMQASYPT 353



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 5/60 (8%)

Query: 969  DLGHAVLLVGYGKQ-DDIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYAT 1023
            +L H V++VGYGK  + I YW+VRNSWGP   ++G+ +++RG  A    CGI   A Y T
Sbjct: 294  ELDHGVVVVGYGKSPEGINYWIVRNSWGPEWGEQGYIRMQRGIEATEGKCGISMQASYPT 353


>gi|303275866|ref|XP_003057227.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461579|gb|EEH58872.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 329

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 153/323 (47%), Gaps = 37/323 (11%)

Query: 658 FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHE-------RYGTSEFSDRSPEEILCK 709
           F AF+++ G+ YA+D +E  +R E F ++  +  E        YG + F+D + +E    
Sbjct: 8   FDAFVLEHGKTYASDAKEYAKRLEIFAENMARAKEMSARDGAEYGATPFADLTEDEFASS 67

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
              +            R +  ++L  +  +  +P  +DWR      P  +Q  CGSCW+F
Sbjct: 68  LLMREPIDAARVERLKRHESSRVLPHLPTEN-IPLNFDWRALGAVTPVKNQGMCGSCWSF 126

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY-THQA 819
           S  G +EG + +K+G LV  S+ QLV+C   C         SGCDG     ++ Y   + 
Sbjct: 127 SATGAVEGAHFVKSGALVSLSEQQLVDCDHTCDPDSGTACDSGCDGGLPANAMAYVVKRG 186

Query: 820 GLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
           GL++E  YPY  A G+ + K   D       T   F+  + S+ +   L K+GPLSV ++
Sbjct: 187 GLDAEAAYPYLGARGDGRCKSKEDGPPAATITNYSFVSADESQ-IAAALVKHGPLSVGID 245

Query: 879 SDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNI--------PYWLVRNSWG 927
           +  +  Y      P       C    L H VL+VG+G +           P+WL++NSWG
Sbjct: 246 ARWMQLYRRGVACPW-----ACDKTRLDHGVLIVGFGAEGRAPARGFRREPFWLIKNSWG 300

Query: 928 PIGPDEGFFKIERGNNACGIEQI 950
               +EG++KI +   +CG+  +
Sbjct: 301 ARWGEEGYYKICKDKGSCGVNTM 323



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 152/323 (47%), Gaps = 36/323 (11%)

Query: 292 FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHE-------RYGTSEFSDRSPEEILCK 343
           F AF+++ G+ YA+D +E  +R E F ++  +  E        YG + F+D + +E    
Sbjct: 8   FDAFVLEHGKTYASDAKEYAKRLEIFAENMARAKEMSARDGAEYGATPFADLTEDEFASS 67

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
              +            R +  ++L  +  +  +P  +DWR      P  +Q  CGSCW+F
Sbjct: 68  LLMREPIDAARVERLKRHESSRVLPHLPTEN-IPLNFDWRALGAVTPVKNQGMCGSCWSF 126

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEY-THQA 454
           S  G +EG + +K+G LV  S+ QLV+C   C     + C  GCDG      + Y   + 
Sbjct: 127 SATGAVEGAHFVKSGALVSLSEQQLVDCDHTCDPDSGTACDSGCDGGLPANAMAYVVKRG 186

Query: 455 GLESEKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
           GL++E  YPY    G+ + K   D       T   F+  + S+ +   L K+GPLSVG++
Sbjct: 187 GLDAEAAYPYLGARGDGRCKSKEDGPPAATITNYSFVSADESQ-IAAALVKHGPLSVGID 245

Query: 514 SHLIHFYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDDI--------PYWLARNSWG 562
           +  +  Y      P       C    L H VL+VG+G +           P+WL +NSWG
Sbjct: 246 ARWMQLYRRGVACPW-----ACDKTRLDHGVLIVGFGAEGRAPARGFRREPFWLIKNSWG 300

Query: 563 PIGPDEGFFKIERGNNACGIEQI 585
               +EG++KI +   +CG+  +
Sbjct: 301 ARWGEEGYYKICKDKGSCGVNTM 323



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 114/231 (49%), Gaps = 28/231 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR      P  +Q  CGSCW+FS  G +EG + +K+G LV  S+ QLV+C   C
Sbjct: 99  IPLNFDWRALGAVTPVKNQGMCGSCWSFSATGAVEGAHFVKSGALVSLSEQQLVDCDHTC 158

Query: 71  ---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFT 119
                    SGCDG     ++ Y   + GL++E  YPY  A G+ + K   D       T
Sbjct: 159 DPDSGTACDSGCDGGLPANAMAYVVKRGGLDAEAAYPYLGARGDGRCKSKEDGPPAATIT 218

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVL 176
              F+  + S+ +   L K+GPLSV +++  +  Y      P       C    L H VL
Sbjct: 219 NYSFVSADESQ-IAAALVKHGPLSVGIDARWMQLYRRGVACPW-----ACDKTRLDHGVL 272

Query: 177 LVGYGKQDNI--------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           +VG+G +           P+WL++NSWG    +EG++KI +   +CG+  +
Sbjct: 273 IVGFGAEGRAPARGFRREPFWLIKNSWGARWGEEGYYKICKDKGSCGVNTM 323



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 8/63 (12%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIP--------YWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
             C    L H VL+VG+G +   P        +WL++NSWG    +EG++KI +   +CG+
Sbjct: 261  ACDKTRLDHGVLIVGFGAEGRAPARGFRREPFWLIKNSWGARWGEEGYYKICKDKGSCGV 320

Query: 1016 EQI 1018
              +
Sbjct: 321  NTM 323


>gi|154183745|gb|ABS70713.1| cathepsin L-like cysteine proteinase [Dermacentor variabilis]
          Length = 333

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 155/322 (48%), Gaps = 29/322 (9%)

Query: 654 ILET-FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHERY---------GTSEFSD 700
           IL T ++AF     + Y ++ E   RF+ F ++     + +E+Y         G ++F D
Sbjct: 22  ILRTQWEAFKATHKKSYQSNMEELLRFKIFSENSLLVARHNEKYARGLVSYKLGMNQFGD 81

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
             P E           RT     A R         V     +P + DWR+K    P  +Q
Sbjct: 82  LLPHEFARMFNGYRGART-----AGRGSTFLPPANVNYS-SLPQSMDWREKGAVTPVKNQ 135

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH- 817
             CGSCWAFS  G LEGQ+ +KTG LV  S+  LV+C++     GC+G   + + +Y   
Sbjct: 136 GQCGSCWAFSTTGSLEGQHFLKTGVLVSLSEQNLVDCSETFGNHGCEGGLMDNAFQYIKA 195

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYGPLSV 875
             G+++EK YPY+  +GE   C + K  V   T   F+    GSE  +KK +   GP+SV
Sbjct: 196 NGGIDTEKSYPYEAEDGE---CRFKKQNVGA-TDTGFVDIEQGSEDDLKKAVATVGPVSV 251

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
            +++        +    ++  CS   L H VL+VGYG +D   YWLV+NSW     D G+
Sbjct: 252 AIDASHSSFQLYSEGVYDETECSSEQLDHGVLVVGYGVEDGKKYWLVKNSWAESWGDNGY 311

Query: 936 FKIERG-NNACGIEQIAGYATI 956
            K+ R  +N CGI   A Y  +
Sbjct: 312 IKMSRDKDNQCGIASAASYPLV 333



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 120/221 (54%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P + DWR+K    P  +Q  CGSCWAFS  G LEGQ+ +KTG LV  S+  LV+C++  
Sbjct: 117 LPQSMDWREKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFLKTGVLVSLSEQNLVDCSETF 176

Query: 71  S--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
              GC+G   + + +Y     G+++EK YPY+  +GE   C + K  V   T   F+   
Sbjct: 177 GNHGCEGGLMDNAFQYIKANGGIDTEKSYPYEAEDGE---CRFKKQNVGA-TDTGFVDIE 232

Query: 127 NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            GSE  +KK +   GP+SV +++        +    ++  CS   L H VL+VGYG +D 
Sbjct: 233 QGSEDDLKKAVATVGPVSVAIDASHSSFQLYSEGVYDETECSSEQLDHGVLVVGYGVEDG 292

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWLV+NSW     D G+ K+ R  +N CGI   A Y  +
Sbjct: 293 KKYWLVKNSWAESWGDNGYIKMSRDKDNQCGIASAASYPLV 333



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 155/323 (47%), Gaps = 30/323 (9%)

Query: 288 ILET-FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHERY---------GTSEFSD 334
           IL T ++AF     + Y ++ E   RF+ F ++     + +E+Y         G ++F D
Sbjct: 22  ILRTQWEAFKATHKKSYQSNMEELLRFKIFSENSLLVARHNEKYARGLVSYKLGMNQFGD 81

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
             P E           RT     A R         V     +P + DWR+K    P  +Q
Sbjct: 82  LLPHEFARMFNGYRGART-----AGRGSTFLPPANVNYS-SLPQSMDWREKGAVTPVKNQ 135

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCWAFS  G LEGQ+ +KTG LV  S+  LV+C+ +  G  GC+G  ++   +Y  
Sbjct: 136 GQCGSCWAFSTTGSLEGQHFLKTGVLVSLSEQNLVDCS-ETFGNHGCEGGLMDNAFQYIK 194

Query: 453 -QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSE-TMKKILYKYGPLS 509
              G+++EK YPY   +GE   C + K  V   T   F+    GSE  +KK +   GP+S
Sbjct: 195 ANGGIDTEKSYPYEAEDGE---CRFKKQNVGA-TDTGFVDIEQGSEDDLKKAVATVGPVS 250

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEG 569
           V +++    F   +    ++  CS   L H VL+VGYG +D   YWL +NSW     D G
Sbjct: 251 VAIDASHSSFQLYSEGVYDETECSSEQLDHGVLVVGYGVEDGKKYWLVKNSWAESWGDNG 310

Query: 570 FFKIERG-NNACGIEQIAGYATI 591
           + K+ R  +N CGI   A Y  +
Sbjct: 311 YIKMSRDKDNQCGIASAASYPLV 333



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 16/109 (14%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDVVKN--------------DET-CSPYDLGHAVLL 976
            D GF  IE+G+     + +A    + V  +              DET CS   L H VL+
Sbjct: 225  DTGFVDIEQGSEDDLKKAVATVGPVSVAIDASHSSFQLYSEGVYDETECSSEQLDHGVLV 284

Query: 977  VGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG +D   YWLV+NSW     D G+ K+ R  +N CGI   A Y  +
Sbjct: 285  VGYGVEDGKKYWLVKNSWAESWGDNGYIKMSRDKDNQCGIASAASYPLV 333


>gi|281350618|gb|EFB26202.1| hypothetical protein PANDA_004780 [Ailuropoda melanoleuca]
          Length = 373

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 162/333 (48%), Gaps = 39/333 (11%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           + F  F ++  R Y+N EE   R + F ++  +  +          +G + FSD + EE 
Sbjct: 40  QVFTLFQIQYNRSYSNPEEYARRLDIFARNLAQAQQLEAEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G       + R+V +   V + +   E    +P   DWRK K V  P   Q  C  
Sbjct: 100 GQLYG-------HRRMVGEAPSVGRKVGSEESGESMPPRCDWRKLKGVISPIKRQENCNC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA ++AG +E  + I+  + V+ S  +L++C +   GC G F ++  +   + +GL SE
Sbjct: 153 CWAMAVAGNVEALWGIRYNRSVQVSVQELLDCGRCGDGCRGGFVWDAFLTILNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIH 883
           +DYP++  N +  KC     K K+   +DF+    +E  +   L   GP++V +N  L+ 
Sbjct: 213 QDYPFR-GNSKPHKCLAKNYK-KVAWIQDFIMLQDNEQRIAWYLATQGPITVTINMKLLQ 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGK------------------QDNIPYWLVRNS 925
            Y    I+    TC P  + H+VLLVG+GK                  ++ IPYW+++NS
Sbjct: 271 QYQKGVIKATPATCDPRLVDHSVLLVGFGKSKSVAGRRAEGGSSQPHRRNPIPYWILKNS 330

Query: 926 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
           WG    ++G+F++ RG+N CGI +    A +D+
Sbjct: 331 WGADWGEKGYFRLHRGSNTCGITKYPLTARVDL 363



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 160/333 (48%), Gaps = 38/333 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           + F  F ++  R Y+N EE   R + F ++  +  +          +G + FSD + EE 
Sbjct: 40  QVFTLFQIQYNRSYSNPEEYARRLDIFARNLAQAQQLEAEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G       + R+V +   V + +   E    +P   DWRK K V  P   Q  C  
Sbjct: 100 GQLYG-------HRRMVGEAPSVGRKVGSEESGESMPPRCDWRKLKGVISPIKRQENCNC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA ++AG +E  + I+  + V+ S  +L++C +   GC G    +  +   + +GL SE
Sbjct: 153 CWAMAVAGNVEALWGIRYNRSVQVSVQELLDCGRCGDGCRGGFVWDAFLTILNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIH 518
           +DYP+R GN +  KC     K K+   +DF+    +E  +   L   GP++V +N  L+ 
Sbjct: 213 QDYPFR-GNSKPHKCLAKNYK-KVAWIQDFIMLQDNEQRIAWYLATQGPITVTINMKLLQ 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK------------------QDDIPYWLARNS 560
            Y    I+    TC P  + H+VLLVG+GK                  ++ IPYW+ +NS
Sbjct: 271 QYQKGVIKATPATCDPRLVDHSVLLVGFGKSKSVAGRRAEGGSSQPHRRNPIPYWILKNS 330

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 593
           WG    ++G+F++ RG+N CGI +    A +D+
Sbjct: 331 WGADWGEKGYFRLHRGSNTCGITKYPLTARVDL 363



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 126/238 (52%), Gaps = 23/238 (9%)

Query: 11  VPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           +P   DWRK K V  P   Q +C  CWA ++AG +E  + I+  + V+ S  +L++C + 
Sbjct: 128 MPPRCDWRKLKGVISPIKRQENCNCCWAMAVAGNVEALWGIRYNRSVQVSVQELLDCGRC 187

Query: 70  CSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
             GC G F ++  +   + +GL SE+DYP++  N +  KC     K K+   +DF+    
Sbjct: 188 GDGCRGGFVWDAFLTILNNSGLASEQDYPFR-GNSKPHKCLAKNYK-KVAWIQDFIMLQD 245

Query: 129 SET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK----- 182
           +E  +   L   GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK     
Sbjct: 246 NEQRIAWYLATQGPITVTINMKLLQQYQKGVIKATPATCDPRLVDHSVLLVGFGKSKSVA 305

Query: 183 -------------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
                        ++ IPYW+++NSWG    ++G+F++ RG+N CGI +    A +D+
Sbjct: 306 GRRAEGGSSQPHRRNPIPYWILKNSWGADWGEKGYFRLHRGSNTCGITKYPLTARVDL 363



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 18/81 (22%)

Query: 964  TCSPYDLGHAVLLVGYGK------------------QDDIPYWLVRNSWGPIGPDEGFFK 1005
            TC P  + H+VLLVG+GK                  ++ IPYW+++NSWG    ++G+F+
Sbjct: 283  TCDPRLVDHSVLLVGFGKSKSVAGRRAEGGSSQPHRRNPIPYWILKNSWGADWGEKGYFR 342

Query: 1006 IERGNNACGIEQIAGYATIDV 1026
            + RG+N CGI +    A +D+
Sbjct: 343  LHRGSNTCGITKYPLTARVDL 363


>gi|15617524|ref|NP_258322.1| cathepsin-like cysteine proteinase [Spodoptera litura NPV]
 gi|37077642|sp|Q91BH1.1|CATV_NPVST RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|15553260|gb|AAL01738.1|AF325155_50 cathepsin-like cysteine proteinase [Spodoptera litura NPV]
          Length = 337

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 9/207 (4%)

Query: 743 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 802
           P+++DWRK N      +Q  CGSCWAF+  G +E QYAI    L++ S+ QL++C +   
Sbjct: 127 PESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDRVDQ 186

Query: 803 GCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGS 860
           GCDG     +  E     G+E E DYPY+   G ++ C    SK+ +     + +     
Sbjct: 187 GCDGGLMHLAFQEIIRIGGVEHEIDYPYQ---GIEYACRLAPSKLAVRLSHCYQYDLRDE 243

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
             + ++LYK GP++V ++   I DY           C+   L HAVLLVGYG +++ PYW
Sbjct: 244 RKLLELLYKNGPIAVAIDCVDIIDYRSGIA----TVCNDNGLNHAVLLVGYGIENDTPYW 299

Query: 921 LVRNSWGPIGPDEGFFKIERGNNACGI 947
           + +NSWG    + G+F+  R  NACG+
Sbjct: 300 IFKNSWGSNWGENGYFRARRNINACGM 326



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 9/207 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P+++DWRK N      +Q  CGSCWAF+  G +E QYAI    L++ S+ QL++C +   
Sbjct: 127 PESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDRVDQ 186

Query: 72  GCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGS 129
           GCDG     +  E     G+E E DYPY+   G ++ C    SK+ +     + +     
Sbjct: 187 GCDGGLMHLAFQEIIRIGGVEHEIDYPYQ---GIEYACRLAPSKLAVRLSHCYQYDLRDE 243

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
             + ++LYK GP++V ++   I DY           C+   L HAVLLVGYG +++ PYW
Sbjct: 244 RKLLELLYKNGPIAVAIDCVDIIDYRSGIA----TVCNDNGLNHAVLLVGYGIENDTPYW 299

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGI 216
           + +NSWG    + G+F+  R  NACG+
Sbjct: 300 IFKNSWGSNWGENGYFRARRNINACGM 326



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 115/210 (54%), Gaps = 14/210 (6%)

Query: 377 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 436
           P+++DWRK N      +Q  CGSCWAF+  G +E QYAI    L++ S+ QL++C +   
Sbjct: 127 PESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDRVDQ 186

Query: 437 GCGGCDGLEQPI--EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FN 493
           GC G  GL      E     G+E E DYPY+   G ++ C    SK+ +     + Y   
Sbjct: 187 GCDG--GLMHLAFQEIIRIGGVEHEIDYPYQ---GIEYACRLAPSKLAVRLSHCYQYDLR 241

Query: 494 GSETMKKILYKYGPLSVGLNS-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI 552
               + ++LYK GP++V ++   +I + +G         C+   L HAVLLVGYG ++D 
Sbjct: 242 DERKLLELLYKNGPIAVAIDCVDIIDYRSGIA-----TVCNDNGLNHAVLLVGYGIENDT 296

Query: 553 PYWLARNSWGPIGPDEGFFKIERGNNACGI 582
           PYW+ +NSWG    + G+F+  R  NACG+
Sbjct: 297 PYWIFKNSWGSNWGENGYFRARRNINACGM 326



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 35/52 (67%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
             C+   L HAVLLVGYG ++D PYW+ +NSWG    + G+F+  R  NACG+
Sbjct: 275  VCNDNGLNHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNINACGM 326


>gi|74765984|sp|Q24940.1|CATLL_FASHE RecName: Full=Cathepsin L-like proteinase; Flags: Precursor
 gi|497700|gb|AAA29136.1| cathepsin [Fasciola hepatica]
          Length = 326

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 112/216 (51%), Gaps = 12/216 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG   +H  
Sbjct: 168 GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGYYTVHSG 224

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++    P +V ++  SD +   +G       +TCSP  + HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGARRPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGTQGG 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGTYWGERGYIRMARNRGNMCGIASLA 317



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 111/216 (51%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG   +H  
Sbjct: 168 GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGYYTVHSG 224

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++    P +V ++  SD +   +G       +TCSP  + HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGARRPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGTQGG 281

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGTYWGERGYIRMARNRGNMCGIASLA 317



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 113/218 (51%), Gaps = 15/218 (6%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC G  +E   +Y  Q GLE+E  YPY    G+   C Y+K   V   TG  +   
Sbjct: 168 -GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGY-YTVH 222

Query: 493 NGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           +GSE  +K ++    P +V ++  S  + + +G       +TCSP  + HAVL VGYG Q
Sbjct: 223 SGSEVELKNLVGARRPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGTQ 279

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
               YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 280 GGTDYWIVKNSWGTYWGERGYIRMARNRGNMCGIASLA 317



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            +   +TCSP  + HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  
Sbjct: 256  IYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRGNMCGIAS 315

Query: 1018 IA 1019
            +A
Sbjct: 316  LA 317


>gi|256082975|ref|XP_002577726.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 1471

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 155/325 (47%), Gaps = 28/325 (8%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFS 699
           ++I+  +K F ++  R Y    E   RF  F  +  K  E            + G +EF+
Sbjct: 54  DDIIAAWKFFKIQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQEGKVTYKMGVNEFT 113

Query: 700 DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 759
           D++  E+    G+K +        A R K    +    +   +P   DWR++       +
Sbjct: 114 DKTDYELKKLRGYKVTSG------AIRHKGSTFIRS--EHTKLPSKVDWRREGAVTDVKN 165

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH 817
           Q  CGSCWAFS  G +EGQ+  KT +LV  S+ QLV+C+K    +GC G     + EY  
Sbjct: 166 QGQCGSCWAFSTTGAIEGQHYRKTNRLVNLSEQQLVDCSKSYGNNGCSGGLMNSAFEYVR 225

Query: 818 -QAGLESEKDYPYKNANG-EKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLS 874
              G++SE  YPY + +G E  +C ++ S +    TG   +H      +   +   GP+S
Sbjct: 226 DNEGIDSEISYPYVSGDGTENNRCLFNASNILAQVTGYVNIHEGDERALMDAVATKGPVS 285

Query: 875 VLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           V +N+ L     Y        D   +   L H VL+VGYG+++   YWL++NSWG    +
Sbjct: 286 VAINAGLPSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEENGRSYWLIKNSWGEEWGE 345

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+ KI +G +N CG+   A Y  +
Sbjct: 346 KGYIKISKGSHNMCGVASAASYPLV 370



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 29/333 (8%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFS 333
           ++I+  +K F ++  R Y    E   RF  F  +  K  E            + G +EF+
Sbjct: 54  DDIIAAWKFFKIQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQEGKVTYKMGVNEFT 113

Query: 334 DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 393
           D++  E+    G+K +        A R K    +    +   +P   DWR++       +
Sbjct: 114 DKTDYELKKLRGYKVTSG------AIRHKGSTFIRS--EHTKLPSKVDWRREGAVTDVKN 165

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYT 451
           Q  CGSCWAFS  G +EGQ+  KT +LV  S+ QLV+C+K   G  GC G  +    EY 
Sbjct: 166 QGQCGSCWAFSTTGAIEGQHYRKTNRLVNLSEQQLVDCSK-SYGNNGCSGGLMNSAFEYV 224

Query: 452 H-QAGLESEKDYPYRNGNG-EKFKCAYDKSKV-KLFTGKDFLYFNGSETMKKILYKYGPL 508
               G++SE  YPY +G+G E  +C ++ S +    TG   ++      +   +   GP+
Sbjct: 225 RDNEGIDSEISYPYVSGDGTENNRCLFNASNILAQVTGYVNIHEGDERALMDAVATKGPV 284

Query: 509 SVGLNSHLIHF--YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           SV +N+ L  F  Y        D   +   L H VL+VGYG+++   YWL +NSWG    
Sbjct: 285 SVAINAGLPSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEENGRSYWLIKNSWGEEWG 344

Query: 567 DEGFFKIERG-NNACGIEQIAGYATIDVVIQRL 598
           ++G+ KI +G +N CG+   A Y  +  +  R+
Sbjct: 345 EKGYIKISKGSHNMCGVASAASYPLVGYLFVRV 377



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 120/230 (52%), Gaps = 8/230 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P   DWR++       +Q  CGSCWAFS  G +EGQ+  KT +LV  S+ QLV+C+K  
Sbjct: 148 LPSKVDWRREGAVTDVKNQGQCGSCWAFSTTGAIEGQHYRKTNRLVNLSEQQLVDCSKSY 207

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-EKFKCAYDKSKV-KLFTGKDFLH 125
             +GC G     + EY     G++SE  YPY + +G E  +C ++ S +    TG   +H
Sbjct: 208 GNNGCSGGLMNSAFEYVRDNEGIDSEISYPYVSGDGTENNRCLFNASNILAQVTGYVNIH 267

Query: 126 FNGSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
                 +   +   GP+SV +N+ L     Y        D   +   L H VL+VGYG++
Sbjct: 268 EGDERALMDAVATKGPVSVAINAGLPSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEE 327

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVVIQRL 232
           +   YWL++NSWG    ++G+ KI +G +N CG+   A Y  +  +  R+
Sbjct: 328 NGRSYWLIKNSWGEEWGEKGYIKISKGSHNMCGVASAASYPLVGYLFVRV 377



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            L H VL+VGYG+++   YWL++NSWG    ++G+ KI +G +N CG+   A Y  +
Sbjct: 315  LDHGVLVVGYGEENGRSYWLIKNSWGEEWGEKGYIKISKGSHNMCGVASAASYPLV 370


>gi|344275468|ref|XP_003409534.1| PREDICTED: cathepsin K-like [Loxodonta africana]
          Length = 329

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 135/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSDSRNNDTLYIPDWEGRAPDSIDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPVGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 245 VSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYILMARNKNNACGIANLASFPKM 329



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 120/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q  
Sbjct: 229 VGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 135/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSDSRNNDTLYIPDWEGRAPDSIDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPVGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYILMARNKNNACGIANLASFPKM 329



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|358345461|ref|XP_003636796.1| Cysteine proteinase [Medicago truncatula]
 gi|355502731|gb|AES83934.1| Cysteine proteinase [Medicago truncatula]
          Length = 475

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 148/322 (45%), Gaps = 44/322 (13%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER-----------YGTSEFSD 700
           E ++E F+ +  +  + Y + EE   R E FK++     ER            G + F+D
Sbjct: 45  EQVVELFQQWKKEHQKFYIHPEEAALRLENFKRNLKYIVERNAMRNSPVGHHLGLNRFAD 104

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            S EE      FK                 K + +VE     P + DWRKK V     DQ
Sbjct: 105 MSNEE------FK----------------NKFISKVESCDDAPYSLDWRKKGVVTGVKDQ 142

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQA 819
             CGSCW+FS  G +EG  AI TG L+  S+ +LV+C     GC+G + + + E+  +  
Sbjct: 143 GNCGSCWSFSSTGAIEGVNAIVTGDLISLSEQELVDCDTTNDGCEGGYMDYAFEWVINNG 202

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           G+++E DYPY    G    C   K + K+ T   +     S++         P+SV ++ 
Sbjct: 203 GIDTEADYPYIGVGG---TCNVTKEETKVVTIDGYTDVTQSDSALFCATVKQPISVGIDG 259

Query: 880 DLI--HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
             +    Y G  I   D + +P D+ HAVL+VGYG   N  YW+V+NSWG     EGF  
Sbjct: 260 STLDFQLYTG-GIYDGDCSSNPDDIDHAVLIVGYGSDGNQDYWIVKNSWGTSWGIEGFIY 318

Query: 938 IERGNN----ACGIEQIAGYAT 955
           I R  N     C I  +A + T
Sbjct: 319 IRRNTNLKYGVCAINYMASFPT 340



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 147/323 (45%), Gaps = 45/323 (13%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER-----------YGTSEFSD 334
           E ++E F+ +  +  + Y + EE   R E FK++     ER            G + F+D
Sbjct: 45  EQVVELFQQWKKEHQKFYIHPEEAALRLENFKRNLKYIVERNAMRNSPVGHHLGLNRFAD 104

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            S EE      FK                 K + +VE     P + DWRKK V     DQ
Sbjct: 105 MSNEE------FK----------------NKFISKVESCDDAPYSLDWRKKGVVTGVKDQ 142

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT-HQ 453
             CGSCW+FS  G +EG  AI TG L+  S+ +LV+C     GC G   ++   E+  + 
Sbjct: 143 GNCGSCWSFSSTGAIEGVNAIVTGDLISLSEQELVDCDTTNDGCEG-GYMDYAFEWVINN 201

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
            G+++E DYPY    G    C   K + K+ T   +     S++         P+SVG++
Sbjct: 202 GGIDTEADYPYIGVGG---TCNVTKEETKVVTIDGYTDVTQSDSALFCATVKQPISVGID 258

Query: 514 SHLIHF--YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
              + F  Y G  I   D + +P D+ HAVL+VGYG   +  YW+ +NSWG     EGF 
Sbjct: 259 GSTLDFQLYTG-GIYDGDCSSNPDDIDHAVLIVGYGSDGNQDYWIVKNSWGTSWGIEGFI 317

Query: 572 KIERGNN----ACGIEQIAGYAT 590
            I R  N     C I  +A + T
Sbjct: 318 YIRRNTNLKYGVCAINYMASFPT 340



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 117/231 (50%), Gaps = 11/231 (4%)

Query: 1   MLMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
            + +VE     P + DWRKK V     DQ +CGSCW+FS  G +EG  AI TG L+  S+
Sbjct: 114 FISKVESCDDAPYSLDWRKKGVVTGVKDQGNCGSCWSFSSTGAIEGVNAIVTGDLISLSE 173

Query: 61  SQLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
            +LV+C     GC+G + + + E+  +  G+++E DYPY    G    C   K + K+ T
Sbjct: 174 QELVDCDTTNDGCEGGYMDYAFEWVINNGGIDTEADYPYIGVGG---TCNVTKEETKVVT 230

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLI--HDYNGTPIRKNDETCSPYDLGHAVLL 177
              +     S++         P+SV ++   +    Y G  I   D + +P D+ HAVL+
Sbjct: 231 IDGYTDVTQSDSALFCATVKQPISVGIDGSTLDFQLYTG-GIYDGDCSSNPDDIDHAVLI 289

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN----ACGIEQIAGYAT 224
           VGYG   N  YW+V+NSWG     EGF  I R  N     C I  +A + T
Sbjct: 290 VGYGSDGNQDYWIVKNSWGTSWGIEGFIYIRRNTNLKYGVCAINYMASFPT 340



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 4/70 (5%)

Query: 958  VVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNN----AC 1013
            +   D + +P D+ HAVL+VGYG   +  YW+V+NSWG     EGF  I R  N     C
Sbjct: 271  IYDGDCSSNPDDIDHAVLIVGYGSDGNQDYWIVKNSWGTSWGIEGFIYIRRNTNLKYGVC 330

Query: 1014 GIEQIAGYAT 1023
             I  +A + T
Sbjct: 331  AINYMASFPT 340


>gi|222641669|gb|EEE69801.1| hypothetical protein OsJ_29533 [Oryza sativa Japonica Group]
          Length = 314

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 112/221 (50%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA   
Sbjct: 97  LPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAY 156

Query: 71  S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLH 125
           +  GC G     + EY  +  GL++E+ YPY   NG    C Y  +   VK+    + + 
Sbjct: 157 NNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENVGVKVLDSVN-IT 212

Query: 126 FNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
               + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG ++
Sbjct: 213 LGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVEN 272

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 273 GVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 313



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 112/221 (50%), Gaps = 10/221 (4%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA   
Sbjct: 97  LPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAY 156

Query: 802 S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLH 856
           +  GC G     + EY  +  GL++E+ YPY   NG    C Y  +   VK+    + + 
Sbjct: 157 NNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENVGVKVLDSVN-IT 212

Query: 857 FNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 915
               + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG ++
Sbjct: 213 LGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVEN 272

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
            +PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 273 GVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 313



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 111/221 (50%), Gaps = 9/221 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P+  DWR+  +  P  DQ  CGSCW FS  G LE  Y   TGK V  S+ QLV+CA   
Sbjct: 97  LPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAY 156

Query: 436 SGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAY--DKSKVKLFTGKDFLY 491
           +  G   GL  Q  EY  +  GL++E+ YPY   NG    C Y  +   VK+    + + 
Sbjct: 157 NNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENVGVKVLDSVN-IT 212

Query: 492 FNGSETMKKILYKYGPLSVGLNS-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
               + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG ++
Sbjct: 213 LGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVEN 272

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
            +PYWL +NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 273 GVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 313



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 40/59 (67%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            SP D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 255  SPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 313


>gi|395856027|ref|XP_003800444.1| PREDICTED: cathepsin K [Otolemur garnettii]
          Length = 329

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 135/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +   R      L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSRSHSNDTLYIPDWEGRAPDSIDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C     GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSDNDGCGG-GYMTNAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SVG+++ L  F   +     DE+C+  ++ HAVL VGYG Q    +W+ +NSWG    
Sbjct: 244 PISVGIDASLTSFQFYSKGVYYDESCNSDNVNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYILMARNKNNACGIANLASFPKM 329



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +   R      L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSRSHSNDTLYIPDWEGRAPDSIDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C     GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSDNDGCGGGYMTNAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE+C+  ++ HAVL VGYG Q    +W+++NSWG    +
Sbjct: 245 ISVGIDASLTSFQFYSKGVYYDESCNSDNVNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYILMARNKNNACGIANLASFPKM 329



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
               GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 172 SDNDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  ++ HAVL VGYG Q  
Sbjct: 229 EGNEKALKRAVARVGPISVGIDASLTSFQFYSKGVYYDESCNSDNVNHAVLAVGYGIQKG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  ++ HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNVNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|401430288|ref|XP_003886537.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|356491333|emb|CBZ40988.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 533

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 140/305 (45%), Gaps = 22/305 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 128 FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 184

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 185 -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 243

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C     GCDG     + ++  Q     L +E  
Sbjct: 244 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDS 303

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+ + S++ +    D     GS  + M   L K GP+++ L++     
Sbjct: 304 YPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 362

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 363 YKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 418

Query: 945 CGIEQ 949
           C + +
Sbjct: 419 CLLSE 423



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 141/306 (46%), Gaps = 23/306 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 128 FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 184

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 185 -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 243

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C     GC G   + Q  ++  Q     L +E 
Sbjct: 244 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDG-GLMLQAFDWLLQNTNGHLHTED 302

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+ + S++ +    D     GS  + M   L K GP+++ L++    
Sbjct: 303 SYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 361

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 362 SYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 417

Query: 579 ACGIEQ 584
           AC + +
Sbjct: 418 ACLLSE 423



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 10/213 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 216 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMN 275

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GCDG     + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     
Sbjct: 276 DGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLI 334

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C    L H VLLVGY     
Sbjct: 335 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGE 390

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           +PYW+++NSWG    ++G+ ++  G NAC + +
Sbjct: 391 VPYWVIKNSWGGDWGEQGYVRVVMGVNACLLSE 423



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 1017
             C    L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC + +
Sbjct: 370  ACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNACLLSE 423


>gi|301762528|ref|XP_002916735.1| PREDICTED: cathepsin W-like [Ailuropoda melanoleuca]
          Length = 374

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 162/333 (48%), Gaps = 39/333 (11%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 706
           + F  F ++  R Y+N EE   R + F ++  +  +          +G + FSD + EE 
Sbjct: 40  QVFTLFQIQYNRSYSNPEEYARRLDIFARNLAQAQQLEAEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G       + R+V +   V + +   E    +P   DWRK K V  P   Q  C  
Sbjct: 100 GQLYG-------HRRMVGEAPSVGRKVGSEESGESMPPRCDWRKLKGVISPIKRQENCNC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA ++AG +E  + I+  + V+ S  +L++C +   GC G F ++  +   + +GL SE
Sbjct: 153 CWAMAVAGNVEALWGIRYNRSVQVSVQELLDCGRCGDGCRGGFVWDAFLTILNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIH 883
           +DYP++  N +  KC     K K+   +DF+    +E  +   L   GP++V +N  L+ 
Sbjct: 213 QDYPFR-GNSKPHKCLAKNYK-KVAWIQDFIMLQDNEQRIAWYLATQGPITVTINMKLLQ 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGK------------------QDNIPYWLVRNS 925
            Y    I+    TC P  + H+VLLVG+GK                  ++ IPYW+++NS
Sbjct: 271 QYQKGVIKATPATCDPRLVDHSVLLVGFGKSKSVAGRRAEGGSSQPHRRNPIPYWILKNS 330

Query: 926 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
           WG    ++G+F++ RG+N CGI +    A +D+
Sbjct: 331 WGADWGEKGYFRLHRGSNTCGITKYPLTARVDL 363



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 160/333 (48%), Gaps = 38/333 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 340
           + F  F ++  R Y+N EE   R + F ++  +  +          +G + FSD + EE 
Sbjct: 40  QVFTLFQIQYNRSYSNPEEYARRLDIFARNLAQAQQLEAEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G       + R+V +   V + +   E    +P   DWRK K V  P   Q  C  
Sbjct: 100 GQLYG-------HRRMVGEAPSVGRKVGSEESGESMPPRCDWRKLKGVISPIKRQENCNC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA ++AG +E  + I+  + V+ S  +L++C +   GC G    +  +   + +GL SE
Sbjct: 153 CWAMAVAGNVEALWGIRYNRSVQVSVQELLDCGRCGDGCRGGFVWDAFLTILNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIH 518
           +DYP+R GN +  KC     K K+   +DF+    +E  +   L   GP++V +N  L+ 
Sbjct: 213 QDYPFR-GNSKPHKCLAKNYK-KVAWIQDFIMLQDNEQRIAWYLATQGPITVTINMKLLQ 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK------------------QDDIPYWLARNS 560
            Y    I+    TC P  + H+VLLVG+GK                  ++ IPYW+ +NS
Sbjct: 271 QYQKGVIKATPATCDPRLVDHSVLLVGFGKSKSVAGRRAEGGSSQPHRRNPIPYWILKNS 330

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 593
           WG    ++G+F++ RG+N CGI +    A +D+
Sbjct: 331 WGADWGEKGYFRLHRGSNTCGITKYPLTARVDL 363



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 126/238 (52%), Gaps = 23/238 (9%)

Query: 11  VPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           +P   DWRK K V  P   Q +C  CWA ++AG +E  + I+  + V+ S  +L++C + 
Sbjct: 128 MPPRCDWRKLKGVISPIKRQENCNCCWAMAVAGNVEALWGIRYNRSVQVSVQELLDCGRC 187

Query: 70  CSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
             GC G F ++  +   + +GL SE+DYP++  N +  KC     K K+   +DF+    
Sbjct: 188 GDGCRGGFVWDAFLTILNNSGLASEQDYPFR-GNSKPHKCLAKNYK-KVAWIQDFIMLQD 245

Query: 129 SET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK----- 182
           +E  +   L   GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK     
Sbjct: 246 NEQRIAWYLATQGPITVTINMKLLQQYQKGVIKATPATCDPRLVDHSVLLVGFGKSKSVA 305

Query: 183 -------------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
                        ++ IPYW+++NSWG    ++G+F++ RG+N CGI +    A +D+
Sbjct: 306 GRRAEGGSSQPHRRNPIPYWILKNSWGADWGEKGYFRLHRGSNTCGITKYPLTARVDL 363



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 18/81 (22%)

Query: 964  TCSPYDLGHAVLLVGYGK------------------QDDIPYWLVRNSWGPIGPDEGFFK 1005
            TC P  + H+VLLVG+GK                  ++ IPYW+++NSWG    ++G+F+
Sbjct: 283  TCDPRLVDHSVLLVGFGKSKSVAGRRAEGGSSQPHRRNPIPYWILKNSWGADWGEKGYFR 342

Query: 1006 IERGNNACGIEQIAGYATIDV 1026
            + RG+N CGI +    A +D+
Sbjct: 343  LHRGSNTCGITKYPLTARVDL 363


>gi|348546019|ref|XP_003460476.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
 gi|348546143|ref|XP_003460538.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 117/223 (52%), Gaps = 13/223 (5%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +PDA DWR K       DQ  CGSCWAFS  G LEGQ+  KTG LV  S+ QLV+C+   
Sbjct: 118 LPDAVDWRDKGYVTDVKDQKQCGSCWAFSATGSLEGQHFRKTGTLVSLSEQQLVDCSGDY 177

Query: 436 SGCGGCDGLEQPIEYTHQ-----AGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDF 489
              G   GL   ++Y  Q      G+++E+ YPY   NG   KC Y+   +    TG   
Sbjct: 178 GNMGCMGGL---MDYAFQYIQANGGIDTEESYPYEAENG---KCRYNPDNIGATSTGYTE 231

Query: 490 LYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           +     + +K+ +   GP+SVG+++  + F        N+  CS  +L H VL VGYG +
Sbjct: 232 VSQGDEDALKEAVATIGPISVGIDASQMSFQFYESGVYNEPDCSSLELDHGVLAVGYGTE 291

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           D   YWL +NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 292 DGNDYWLVKNSWGLEWGDKGYIKMSRNKSNQCGIATAASYPLV 334



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 117/220 (53%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PDA DWR K       DQ  CGSCWAFS  G LEGQ+  KTG LV  S+ QLV+C+   
Sbjct: 118 LPDAVDWRDKGYVTDVKDQKQCGSCWAFSATGSLEGQHFRKTGTLVSLSEQQLVDCSGDY 177

Query: 71  S--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHF 126
              GC G   + + +Y     G+++E+ YPY+  NG   KC Y+   +    TG   +  
Sbjct: 178 GNMGCMGGLMDYAFQYIQANGGIDTEESYPYEAENG---KCRYNPDNIGATSTGYTEVSQ 234

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
              + +K+ +   GP+SV +++  +          N+  CS  +L H VL VGYG +D  
Sbjct: 235 GDEDALKEAVATIGPISVGIDASQMSFQFYESGVYNEPDCSSLELDHGVLAVGYGTEDGN 294

Query: 187 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 295 DYWLVKNSWGLEWGDKGYIKMSRNKSNQCGIATAASYPLV 334



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 117/220 (53%), Gaps = 8/220 (3%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +PDA DWR K       DQ  CGSCWAFS  G LEGQ+  KTG LV  S+ QLV+C+   
Sbjct: 118 LPDAVDWRDKGYVTDVKDQKQCGSCWAFSATGSLEGQHFRKTGTLVSLSEQQLVDCSGDY 177

Query: 802 S--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHF 857
              GC G   + + +Y     G+++E+ YPY+  NG   KC Y+   +    TG   +  
Sbjct: 178 GNMGCMGGLMDYAFQYIQANGGIDTEESYPYEAENG---KCRYNPDNIGATSTGYTEVSQ 234

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 917
              + +K+ +   GP+SV +++  +          N+  CS  +L H VL VGYG +D  
Sbjct: 235 GDEDALKEAVATIGPISVGIDASQMSFQFYESGVYNEPDCSSLELDHGVLAVGYGTEDGN 294

Query: 918 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
            YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 295 DYWLVKNSWGLEWGDKGYIKMSRNKSNQCGIATAASYPLV 334



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V N+  CS  +L H VL VGYG +D   YWLV+NSWG    D+G+ K+ R  +N CGI  
Sbjct: 268  VYNEPDCSSLELDHGVLAVGYGTEDGNDYWLVKNSWGLEWGDKGYIKMSRNKSNQCGIAT 327

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 328  AASYPLV 334


>gi|33348836|gb|AAQ16118.1| cathepsin L-like cysteine proteinase B [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 335

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 161/330 (48%), Gaps = 18/330 (5%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGTSE 697
           L +  +     E +   + AF    G+ YA+D E   R + + ++  K    +E+Y  S+
Sbjct: 10  LFVTAAAITHQELVGAEWSAFKALHGKDYASDTEEYYRLKIYMENRLKIARHNEKYAKSQ 69

Query: 698 FSDR-SPEEI--LCKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPDAWDWRKKN 752
            S + +  E   L    F  +   ++R   D  +     +E E  +D  +P   DWRKK 
Sbjct: 70  VSYKLAMNEFGDLLHHEFVSTRNGFKRNYRDSPREGSFFVEPEGFEDLQLPKTVDWRKKG 129

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFE 810
              P  +Q  CGSCWAFS  G LEG +  KT KLV  S+  LV+C++    +GC+G   +
Sbjct: 130 AVTPVKNQGQCGSCWAFSTTGSLEGPHFRKTRKLVSLSEQNLVDCSRSFGNNGCEGGLMD 189

Query: 811 PSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKIL 867
            + +Y     G+++E  YPY   +G    C +++S V   T   F+    G E  +KK +
Sbjct: 190 NAFKYIKSNKGIDTEWSYPYNATDG---VCHFNRSDVGA-TDTGFVDIPEGDENKLKKAV 245

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927
              GP+SV +++        +    ++  CS   L H VL+VGYG +D   YWLV+NSWG
Sbjct: 246 AAVGPVSVAIDASHESFQFYSEGVYDEPECSSEQLDHGVLVVGYGTKDGQDYWLVKNSWG 305

Query: 928 PIGPDEGFFKIERG-NNACGIEQIAGYATI 956
               DEG+  + R  +N CGI   A Y  +
Sbjct: 306 TTWGDEGYIYMTRNKDNQCGIASSASYPLV 335



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 161/331 (48%), Gaps = 19/331 (5%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGTSE 331
           L +  +     E +   + AF    G+ YA+D E   R + + ++  K    +E+Y  S+
Sbjct: 10  LFVTAAAITHQELVGAEWSAFKALHGKDYASDTEEYYRLKIYMENRLKIARHNEKYAKSQ 69

Query: 332 FSDR-SPEEI--LCKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPDAWDWRKKN 386
            S + +  E   L    F  +   ++R   D  +     +E E  +D  +P   DWRKK 
Sbjct: 70  VSYKLAMNEFGDLLHHEFVSTRNGFKRNYRDSPREGSFFVEPEGFEDLQLPKTVDWRKKG 129

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--L 444
              P  +Q  CGSCWAFS  G LEG +  KT KLV  S+  LV+C++   G  GC+G  +
Sbjct: 130 AVTPVKNQGQCGSCWAFSTTGSLEGPHFRKTRKLVSLSEQNLVDCSRSF-GNNGCEGGLM 188

Query: 445 EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSET-MKKI 501
           +   +Y     G+++E  YPY   +G    C +++S V   T   F+    G E  +KK 
Sbjct: 189 DNAFKYIKSNKGIDTEWSYPYNATDG---VCHFNRSDVGA-TDTGFVDIPEGDENKLKKA 244

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
           +   GP+SV +++    F   +    ++  CS   L H VL+VGYG +D   YWL +NSW
Sbjct: 245 VAAVGPVSVAIDASHESFQFYSEGVYDEPECSSEQLDHGVLVVGYGTKDGQDYWLVKNSW 304

Query: 562 GPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           G    DEG+  + R  +N CGI   A Y  +
Sbjct: 305 GTTWGDEGYIYMTRNKDNQCGIASSASYPLV 335



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 119/225 (52%), Gaps = 10/225 (4%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +D  +P   DWRKK    P  +Q  CGSCWAFS  G LEG +  KT KLV  S+  LV+C
Sbjct: 115 EDLQLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGPHFRKTRKLVSLSEQNLVDC 174

Query: 67  AKQC--SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           ++    +GC+G   + + +Y     G+++E  YPY   +G    C +++S V   T   F
Sbjct: 175 SRSFGNNGCEGGLMDNAFKYIKSNKGIDTEWSYPYNATDG---VCHFNRSDVGA-TDTGF 230

Query: 124 LHF-NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           +    G E  +KK +   GP+SV +++        +    ++  CS   L H VL+VGYG
Sbjct: 231 VDIPEGDENKLKKAVAAVGPVSVAIDASHESFQFYSEGVYDEPECSSEQLDHGVLVVGYG 290

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            +D   YWLV+NSWG    DEG+  + R  +N CGI   A Y  +
Sbjct: 291 TKDGQDYWLVKNSWGTTWGDEGYIYMTRNKDNQCGIASSASYPLV 335



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V ++  CS   L H VL+VGYG +D   YWLV+NSWG    DEG+  + R  +N CGI  
Sbjct: 269  VYDEPECSSEQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDEGYIYMTRNKDNQCGIAS 328

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 329  SASYPLV 335


>gi|82659048|gb|ABB88697.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 139/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+    L   S+ QLV C  + +GC G     + E+        + +
Sbjct: 151 WAFSAVGSIESQWALAGHGLTALSEQQLVSCDDKDNGCGGGLMLQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY +++G   +C+     V       ++    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY +   +PYW+++NSWG    + G+ ++  G 
Sbjct: 271 MSYQSGVL----TSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGENGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 140/304 (46%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+    L   S+ QLV C  + +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGSIESQWALAGHGLTALSEQQLVSCDDKDNGCGGGLML-QAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY + +G   +C+     V       ++    SET M   L K GP+S+ +++  
Sbjct: 210 TEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY +  ++PYW+ +NSWG    + G+ ++  G
Sbjct: 270 FMSYQSGVL----TSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGENGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWRKK    P  DQ  CGSCWAFS  G +E Q+A+    L   S+ QLV C  + 
Sbjct: 126 VPDAVDWRKKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHGLTALSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +E  YPY +++G   +C+     V       ++   
Sbjct: 186 NGCGGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +
Sbjct: 246 SSETVMAAWLAKNGPISIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNRTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    + G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGENGYVRVTMGVNAC 329



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY +  ++PYW+++NSWG    + G+ ++  G NAC
Sbjct: 280  SCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGENGYVRVTMGVNAC 329


>gi|403302734|ref|XP_003942008.1| PREDICTED: cathepsin K isoform 1 [Saimiri boliviensis boliviensis]
          Length = 329

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPTSFSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 245 ISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYILMARNKNNACGIANLASFPKM 329



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q  
Sbjct: 229 EGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 136/266 (51%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPTSFSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 244 PISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYILMARNKNNACGIANLASFPKM 329



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|348586441|ref|XP_003478977.1| PREDICTED: cathepsin K-like [Cavia porcellus]
          Length = 329

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 135/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +          L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSHSHSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQENRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPVGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE+C+  DL HA+L VGYG Q    +W+++NSWG    +
Sbjct: 245 VSVAIDASLSSFQFYSKGVYYDESCNGEDLNHALLAVGYGMQRGNKHWILKNSWGENWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYVLLARNKNNACGIANLASFPKM 329



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFQYVQENRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  DL HA+L VGYG Q  
Sbjct: 229 VGNEKALKRAVARVGPVSVAIDASLSSFQFYSKGVYYDESCNGEDLNHALLAVGYGMQRG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWILKNSWGENWGNKGYVLLARNKNNACGIANLASFPKM 329



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 135/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +          L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSHSHSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQENRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPVGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE+C+  DL HA+L VGYG Q    +W+ +NSWG    
Sbjct: 244 PVSVAIDASLSSFQFYSKGVYYDESCNGEDLNHALLAVGYGMQRGNKHWILKNSWGENWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYVLLARNKNNACGIANLASFPKM 329



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  DL HA+L VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNGEDLNHALLAVGYGMQRGNKHWILKNSWGENWGNKGYVLLARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|7271891|gb|AAF44676.1|AF239265_1 cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VP + DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPASIDWRESGYVTEVKDQGQCGSCWAFSTTGAMEGQYMKNQRTSISFSEQQLVDCSDDF 167

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
              GC+G   E + EY  + GLE+E  YPY+   G    C Y+K   V   TG   +H  
Sbjct: 168 GNFGCNGGLMENACEYLKRFGLETESSYPYRAVEG---PCRYNKQLGVAKVTGYYMVHSG 224

Query: 128 GSETMKKILYKYGPLSVLL--NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               ++ ++   GP +V L  +SD +   +G       +TCSP  L H VL VGYG Q  
Sbjct: 225 DEVELQNLVGIEGPAAVALDVDSDFMMYRSGI---YQSQTCSPEFLNHGVLAVGYGTQSG 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YW+V+NSWGP   + G+ ++ R   N CGI  +A    +
Sbjct: 282 TDYWIVKNSWGPWWGENGYIRMVRNRGNMCGIASLASVPMV 322



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VP + DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPASIDWRESGYVTEVKDQGQCGSCWAFSTTGAMEGQYMKNQRTSISFSEQQLVDCSDDF 167

Query: 802 S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
              GC+G   E + EY  + GLE+E  YPY+   G    C Y+K   V   TG   +H  
Sbjct: 168 GNFGCNGGLMENACEYLKRFGLETESSYPYRAVEG---PCRYNKQLGVAKVTGYYMVHSG 224

Query: 859 GSETMKKILYKYGPLSVLL--NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               ++ ++   GP +V L  +SD +   +G       +TCSP  L H VL VGYG Q  
Sbjct: 225 DEVELQNLVGIEGPAAVALDVDSDFMMYRSGI---YQSQTCSPEFLNHGVLAVGYGTQSG 281

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
             YW+V+NSWGP   + G+ ++ R   N CGI  +A    +
Sbjct: 282 TDYWIVKNSWGPWWGENGYIRMVRNRGNMCGIASLASVPMV 322



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 113/222 (50%), Gaps = 13/222 (5%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VP + DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPASIDWRESGYVTEVKDQGQCGSCWAFSTTGAMEGQYMKNQRTSISFSEQQLVDCSDDF 167

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC+G  +E   EY  + GLE+E  YPYR   G    C Y+K   V   TG   ++ 
Sbjct: 168 -GNFGCNGGLMENACEYLKRFGLETESSYPYRAVEG---PCRYNKQLGVAKVTGYYMVHS 223

Query: 493 NGSETMKKILYKYGPLSVGL--NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                ++ ++   GP +V L  +S  + + +G       +TCSP  L H VL VGYG Q 
Sbjct: 224 GDEVELQNLVGIEGPAAVALDVDSDFMMYRSGI---YQSQTCSPEFLNHGVLAVGYGTQS 280

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
              YW+ +NSWGP   + G+ ++ R   N CGI  +A    +
Sbjct: 281 GTDYWIVKNSWGPWWGENGYIRMVRNRGNMCGIASLASVPMV 322



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 17/107 (15%)

Query: 934  GFFKIERGN-----NACGIEQIAGYATIDV----------VKNDETCSPYDLGHAVLLVG 978
            G++ +  G+     N  GIE  A  A +DV          +   +TCSP  L H VL VG
Sbjct: 217  GYYMVHSGDEVELQNLVGIEGPAAVA-LDVDSDFMMYRSGIYQSQTCSPEFLNHGVLAVG 275

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
            YG Q    YW+V+NSWGP   + G+ ++ R   N CGI  +A    +
Sbjct: 276  YGTQSGTDYWIVKNSWGPWWGENGYIRMVRNRGNMCGIASLASVPMV 322


>gi|47523662|ref|NP_999467.1| cathepsin K precursor [Sus scrofa]
 gi|15213940|sp|Q9GLE3.1|CATK_PIG RecName: Full=Cathepsin K; Flags: Precursor
 gi|10048286|gb|AAG12340.1|AF292030_1 cathepsin K precursor [Sus scrofa]
          Length = 330

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYV 128

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 129 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 188

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 189 YVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 245

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 246 VSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGN 305

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 306 KGYILMARNKNNACGIANLASFPKM 330



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 113 EGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 172

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 173 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIP 229

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL VGYG Q  
Sbjct: 230 EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 290 KKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 330



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYV 128

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 129 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 187

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 188 QYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 244

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 245 PVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWG 304

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 305 NKGYILMARNKNNACGIANLASFPKM 330



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 267  DENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 326

Query: 1021 YATI 1024
            +  +
Sbjct: 327  FPKM 330


>gi|255585361|ref|XP_002533377.1| cysteine protease, putative [Ricinus communis]
 gi|223526784|gb|EEF29008.1| cysteine protease, putative [Ricinus communis]
          Length = 381

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 157/349 (44%), Gaps = 54/349 (15%)

Query: 646 SLTFDNENIL-----ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER-------- 692
           S+T  N   L     E FK F++K  ++Y   EE   R   F ++  +  E         
Sbjct: 50  SVTLSNRKFLGTNTEENFKMFMIKYDKEYDTREEYMHRLGVFAKNLIRAAEHQVLDPTAV 109

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPDAWDWRK 750
           +G + F D + EE          ER Y  +V       + +      +   +P ++DWRK
Sbjct: 110 HGITPFMDLTEEEF---------ERMYTGVVGGGAVGAEGVTATSFLETAGLPSSFDWRK 160

Query: 751 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--------- 801
           K        Q ACGSCWAFS  G +EG   I TGKL+  S+ QLV+C + C         
Sbjct: 161 KGAVTDVKMQGACGSCWAFSTTGAIEGANFIATGKLLNLSEQQLVDCDRVCDIKEKTACD 220

Query: 802 SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
            GC G     +  Y  +A GLE E  YPY    G+  KC +D+ K+ +    +F      
Sbjct: 221 DGCGGGLMTNAYRYLIEAGGLEDEISYPY---TGKPGKCKFDEKKIAVRV-VNFTSIPID 276

Query: 861 ET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYG---- 912
           E  +   L  +GPL++ LN+  +  Y G    P+      C    + H VLLVGYG    
Sbjct: 277 ENQIAAHLVHHGPLAIGLNAVFMQTYIGGVSCPL-----ICGKKWINHGVLLVGYGAKGF 331

Query: 913 ---KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
              +    PYW+++NSWG    +EG+++I +G   CG++++       V
Sbjct: 332 SILRLGYKPYWIIKNSWGKRWGEEGYYRICKGYGMCGMDRMVSAVVTQV 380



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 155/349 (44%), Gaps = 53/349 (15%)

Query: 280 SLTFDNENIL-----ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER-------- 326
           S+T  N   L     E FK F++K  ++Y   EE   R   F ++  +  E         
Sbjct: 50  SVTLSNRKFLGTNTEENFKMFMIKYDKEYDTREEYMHRLGVFAKNLIRAAEHQVLDPTAV 109

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPDAWDWRK 384
           +G + F D + EE          ER Y  +V       + +      +   +P ++DWRK
Sbjct: 110 HGITPFMDLTEEEF---------ERMYTGVVGGGAVGAEGVTATSFLETAGLPSSFDWRK 160

Query: 385 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--------- 435
           K        Q ACGSCWAFS  G +EG   I TGKL+  S+ QLV+C + C         
Sbjct: 161 KGAVTDVKMQGACGSCWAFSTTGAIEGANFIATGKLLNLSEQQLVDCDRVCDIKEKTACD 220

Query: 436 SGCGGCDGLEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG 494
            GCGG   +     Y  +A GLE E  YPY    G+  KC +D+ K+ +           
Sbjct: 221 DGCGG-GLMTNAYRYLIEAGGLEDEISYPY---TGKPGKCKFDEKKIAVRVVNFTSIPID 276

Query: 495 SETMKKILYKYGPLSVGLNSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
              +   L  +GPL++GLN+  +  Y G    P+      C    + H VLLVGYG +  
Sbjct: 277 ENQIAAHLVHHGPLAIGLNAVFMQTYIGGVSCPL-----ICGKKWINHGVLLVGYGAKGF 331

Query: 552 I-------PYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 593
                   PYW+ +NSWG    +EG+++I +G   CG++++       V
Sbjct: 332 SILRLGYKPYWIIKNSWGKRWGEEGYYRICKGYGMCGMDRMVSAVVTQV 380



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 117/238 (49%), Gaps = 30/238 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P ++DWRKK        Q  CGSCWAFS  G +EG   I TGKL+  S+ QLV+C + C
Sbjct: 152 LPSSFDWRKKGAVTDVKMQGACGSCWAFSTTGAIEGANFIATGKLLNLSEQQLVDCDRVC 211

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                     GC G     +  Y  +A GLE E  YPY    G+  KC +D+ K+ +   
Sbjct: 212 DIKEKTACDDGCGGGLMTNAYRYLIEAGGLEDEISYPY---TGKPGKCKFDEKKIAVRV- 267

Query: 121 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 176
            +F      E  +   L  +GPL++ LN+  +  Y G    P+      C    + H VL
Sbjct: 268 VNFTSIPIDENQIAAHLVHHGPLAIGLNAVFMQTYIGGVSCPL-----ICGKKWINHGVL 322

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           LVGYG       +    PYW+++NSWG    +EG+++I +G   CG++++       V
Sbjct: 323 LVGYGAKGFSILRLGYKPYWIIKNSWGKRWGEEGYYRICKGYGMCGMDRMVSAVVTQV 380


>gi|15128493|dbj|BAB62718.1| plerocercoid growth factor/cysteine protease [Spirometra
           erinaceieuropaei]
 gi|15130639|dbj|BAB62799.1| plerocercoid growth factor-2/cysteine protease [Spirometra
           erinaceieuropaei]
          Length = 336

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 167/325 (51%), Gaps = 41/325 (12%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK---------QDGHKKHERYGT--SEFSDRSP 337
           E +KA+ +   ++Y +++EE+  +  +F          Q  +++ E Y    ++FSD +P
Sbjct: 30  ELWKAWKLAFKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAVRLNDFSDLTP 89

Query: 338 ----EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 393
               E  LC  G          ++    + E + + ++++  +PD+ +WR++       +
Sbjct: 90  GEFAERYLCLRGI---------VLTKLRRKEAVSVPLKEN--LPDSVNWRERGAVTSVKN 138

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYT 451
           Q  CGSCW+FS  G +EG   IKTG L   S+ QL++C+    G  GC+G  + Q  +Y 
Sbjct: 139 QGQCGSCWSFSANGAIEGAIQIKTGALRSLSEQQLMDCSWD-YGNQGCNGGLMPQAFQYA 197

Query: 452 HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSV 510
            + G+E+E DY Y   +G    C Y +  V    TG   L       +++ +   GP+SV
Sbjct: 198 QRYGVEAEVDYRYTERDG---VCRYRQDLVVANVTGYAELPEGDEGGLQRAVATIGPISV 254

Query: 511 GLNSH---LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPD 567
           G+++     + + +G  + K   TCSPY + H VL+VGYG ++   YWL +NSWG    +
Sbjct: 255 GIDAADPGFMSYSHGVFVSK---TCSPYAIDHGVLVVGYGAENGEAYWLVKNSWGSSWGE 311

Query: 568 EGFFKIERG-NNACGIEQIAGYATI 591
            G+ K+ R  NN CGI  +A Y T+
Sbjct: 312 GGYVKMARNRNNMCGIASMASYPTV 336



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 164/324 (50%), Gaps = 40/324 (12%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK---------QDGHKKHERYGT--SEFSDRSP 703
           E +KA+ +   ++Y +++EE+  +  +F          Q  +++ E Y    ++FSD +P
Sbjct: 30  ELWKAWKLAFKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAVRLNDFSDLTP 89

Query: 704 ----EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 759
               E  LC  G          ++    + E + + ++++  +PD+ +WR++       +
Sbjct: 90  GEFAERYLCLRGI---------VLTKLRRKEAVSVPLKEN--LPDSVNWRERGAVTSVKN 138

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTH 817
           Q  CGSCW+FS  G +EG   IKTG L   S+ QL++C+      GC+G     + +Y  
Sbjct: 139 QGQCGSCWSFSANGAIEGAIQIKTGALRSLSEQQLMDCSWDYGNQGCNGGLMPQAFQYAQ 198

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVL 876
           + G+E+E DY Y   +G    C Y +  V    TG   L       +++ +   GP+SV 
Sbjct: 199 RYGVEAEVDYRYTERDG---VCRYRQDLVVANVTGYAELPEGDEGGLQRAVATIGPISVG 255

Query: 877 LNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
           +++     +   +G  + K   TCSPY + H VL+VGYG ++   YWLV+NSWG    + 
Sbjct: 256 IDAADPGFMSYSHGVFVSK---TCSPYAIDHGVLVVGYGAENGEAYWLVKNSWGSSWGEG 312

Query: 934 GFFKIERG-NNACGIEQIAGYATI 956
           G+ K+ R  NN CGI  +A Y T+
Sbjct: 313 GYVKMARNRNNMCGIASMASYPTV 336



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 119/222 (53%), Gaps = 13/222 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD+ +WR++       +Q  CGSCW+FS  G +EG   IKTG L   S+ QL++C+   
Sbjct: 121 LPDSVNWRERGAVTSVKNQGQCGSCWSFSANGAIEGAIQIKTGALRSLSEQQLMDCSWDY 180

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFN 127
              GC+G     + +Y  + G+E+E DY Y   +G    C Y +  V    TG   L   
Sbjct: 181 GNQGCNGGLMPQAFQYAQRYGVEAEVDYRYTERDG---VCRYRQDLVVANVTGYAELPEG 237

Query: 128 GSETMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
               +++ +   GP+SV +++     +   +G  + K   TCSPY + H VL+VGYG ++
Sbjct: 238 DEGGLQRAVATIGPISVGIDAADPGFMSYSHGVFVSK---TCSPYAIDHGVLVVGYGAEN 294

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
              YWLV+NSWG    + G+ K+ R  NN CGI  +A Y T+
Sbjct: 295 GEAYWLVKNSWGSSWGEGGYVKMARNRNNMCGIASMASYPTV 336



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
             +TCSPY + H VL+VGYG ++   YWLV+NSWG    + G+ K+ R  NN CGI  +A 
Sbjct: 273  SKTCSPYAIDHGVLVVGYGAENGEAYWLVKNSWGSSWGEGGYVKMARNRNNMCGIASMAS 332

Query: 1021 YATI 1024
            Y T+
Sbjct: 333  YPTV 336


>gi|74178074|dbj|BAE29827.1| unnamed protein product [Mus musculus]
 gi|74178231|dbj|BAE29900.1| unnamed protein product [Mus musculus]
 gi|74220784|dbj|BAE31361.1| unnamed protein product [Mus musculus]
          Length = 326

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 133/271 (49%), Gaps = 21/271 (7%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 70  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 120

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCGGCDG 443
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GCGG   
Sbjct: 121 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 180

Query: 444 LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKI 501
            E         G+E++  YPY+       KC Y+ SK +  T   +  L F   + +K+ 
Sbjct: 181 TEAFQYIIDNGGIEADASYPYK---ATDEKCHYN-SKNRAATCSRYIQLPFGDEDALKEA 236

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
           +   GP+SVG+++    F+       +D +C+  ++ H VL+VGYG  D   YWL +NSW
Sbjct: 237 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 295

Query: 562 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 296 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 326



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 135/271 (49%), Gaps = 22/271 (8%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 70  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 120

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFF 809
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GC G + 
Sbjct: 121 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 180

Query: 810 EPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGSETMKKI 866
             + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++   F   + +K+ 
Sbjct: 181 TEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SKNRAATCSRYIQLPFGDEDALKEA 236

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926
           +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  D   YWLV+NSW
Sbjct: 237 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 295

Query: 927 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 296 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 326



 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR+K        Q  CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ + 
Sbjct: 109 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 168

Query: 70  ---CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++ 
Sbjct: 169 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SKNRAATCSRYIQ 224

Query: 126 --FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
             F   + +K+ +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  
Sbjct: 225 LPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTL 283

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 284 DGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 326



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V +D +C+  ++ H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI  
Sbjct: 261  VYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIAS 319

Query: 1018 IAGYATI 1024
               Y  I
Sbjct: 320  YCSYPEI 326


>gi|29165304|gb|AAO65603.1| cathepsin L precursor [Hydra vulgaris]
          Length = 324

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 118/221 (53%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 68
            PD  DWR +    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C  A 
Sbjct: 108 APDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSTAY 167

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GCDG   + +  Y  +  G++SE  YPY   +G   KC + KS V   T   F+   
Sbjct: 168 GNNGCDGGLMDNAFTYIKENKGIDSEASYPYTAEDG---KCVFKKSSVAA-TDTGFVDIP 223

Query: 127 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            G+E  +K+ +   GP+SV +++        +    N+ +CS  +L H VL+VGYG +  
Sbjct: 224 EGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCSSTELDHGVLVVGYGTESG 283

Query: 186 IPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
             YWLV+NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 284 KDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKASYPLV 324



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 118/221 (53%), Gaps = 10/221 (4%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 799
            PD  DWR +    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C  A 
Sbjct: 108 APDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSTAY 167

Query: 800 QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 857
             +GCDG   + +  Y  +  G++SE  YPY   +G   KC + KS V   T   F+   
Sbjct: 168 GNNGCDGGLMDNAFTYIKENKGIDSEASYPYTAEDG---KCVFKKSSVAA-TDTGFVDIP 223

Query: 858 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
            G+E  +K+ +   GP+SV +++        +    N+ +CS  +L H VL+VGYG +  
Sbjct: 224 EGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCSSTELDHGVLVVGYGTESG 283

Query: 917 IPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
             YWLV+NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 284 KDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKASYPLV 324



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 118/222 (53%), Gaps = 11/222 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            PD  DWR +    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+   
Sbjct: 108 APDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCS-TA 166

Query: 436 SGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            G  GCDG  ++    Y  +  G++SE  YPY   +G   KC + KS V   T   F+  
Sbjct: 167 YGNNGCDGGLMDNAFTYIKENKGIDSEASYPYTAEDG---KCVFKKSSVAA-TDTGFVDI 222

Query: 493 -NGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
             G+E  +K+ +   GP+SV +++    F   +    N+ +CS  +L H VL+VGYG + 
Sbjct: 223 PEGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCSSTELDHGVLVVGYGTES 282

Query: 551 DIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
              YWL +NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 283 GKDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKASYPLV 324



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 16/109 (14%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  I  GN     E +A    I V               V N+ +CS  +L H VL+
Sbjct: 216  DTGFVDIPEGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCSSTELDHGVLV 275

Query: 977  VGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 1024
            VGYG +    YWLV+NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 276  VGYGTESGKDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKASYPLV 324


>gi|410910990|ref|XP_003968973.1| PREDICTED: cathepsin K-like [Takifugu rubripes]
          Length = 329

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 157/341 (46%), Gaps = 35/341 (10%)

Query: 635 VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKK 689
           V + +   ++G+ +     + E +K   VK  ++Y N  E+  R   ++ +      H  
Sbjct: 5   VEKNEGFQVQGNASSALNKVWEEWK---VKHSKRYDNQTEMVHRRAAWEHNVRLVLRHNL 61

Query: 690 HERYGTSEFS-------DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV 742
               G   F+       D + EE+        +E+     V +   V     E + D   
Sbjct: 62  EASAGKHGFTLELNHLADMTAEEV--------NEKMNNLKVEEWVPVRNGTFEDKLDSET 113

Query: 743 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 802
           P + DWRK  +  P  +Q  CGSCWAFS  G LEGQ   KTG LV  S   L++C+    
Sbjct: 114 PQSVDWRKHGLVSPVQNQGYCGSCWAFSSLGALEGQMKRKTGFLVPLSPQNLLDCSTSDG 173

Query: 803 --GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFN 858
             GC G +   S  Y     G++SE  YPY++  G   KC Y  K K    +    L   
Sbjct: 174 NLGCRGGYISKSYSYIIRNGGVDSESFYPYEHQKG---KCRYSVKGKAGYCSRFHILPQG 230

Query: 859 GSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
             ET+K  + + GP++V +N+ L   H Y G     N   C+P  + HAVL+VGYG  + 
Sbjct: 231 DEETLKATVARVGPVAVAVNAMLASFHLYRGGLY--NVPNCNPKFINHAVLVVGYGSSEG 288

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
             +WLV+NSWG    +EG+ ++ R   N CGI   A Y ++
Sbjct: 289 QDFWLVKNSWGSAWGEEGYIRLARNKKNLCGIASFAVYPSL 329



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 116/225 (51%), Gaps = 12/225 (5%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D   P + DWRK  +  P  +Q  CGSCWAFS  G LEGQ   KTG LV  S   L++C+
Sbjct: 110 DSETPQSVDWRKHGLVSPVQNQGYCGSCWAFSSLGALEGQMKRKTGFLVPLSPQNLLDCS 169

Query: 68  KQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDF 123
                 GC G +   S  Y     G++SE  YPY++  G   KC Y  K K    +    
Sbjct: 170 TSDGNLGCRGGYISKSYSYIIRNGGVDSESFYPYEHQKG---KCRYSVKGKAGYCSRFHI 226

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           L     ET+K  + + GP++V +N+ L   H Y G     N   C+P  + HAVL+VGYG
Sbjct: 227 LPQGDEETLKATVARVGPVAVAVNAMLASFHLYRGGLY--NVPNCNPKFINHAVLVVGYG 284

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +   +WLV+NSWG    +EG+ ++ R   N CGI   A Y ++
Sbjct: 285 SSEGQDFWLVKNSWGSAWGEEGYIRLARNKKNLCGIASFAVYPSL 329



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 157/342 (45%), Gaps = 36/342 (10%)

Query: 269 VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKK 323
           V + +   ++G+ +     + E +K   VK  ++Y N  E+  R   ++ +      H  
Sbjct: 5   VEKNEGFQVQGNASSALNKVWEEWK---VKHSKRYDNQTEMVHRRAAWEHNVRLVLRHNL 61

Query: 324 HERYGTSEFS-------DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV 376
               G   F+       D + EE+        +E+     V +   V     E + D   
Sbjct: 62  EASAGKHGFTLELNHLADMTAEEV--------NEKMNNLKVEEWVPVRNGTFEDKLDSET 113

Query: 377 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 436
           P + DWRK  +  P  +Q  CGSCWAFS  G LEGQ   KTG LV  S   L++C+    
Sbjct: 114 PQSVDWRKHGLVSPVQNQGYCGSCWAFSSLGALEGQMKRKTGFLVPLSPQNLLDCSTS-D 172

Query: 437 GCGGCDGLEQPIEYTH---QAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLYF 492
           G  GC G      Y++     G++SE  YPY +   +K KC Y  K K    +    L  
Sbjct: 173 GNLGCRGGYISKSYSYIIRNGGVDSESFYPYEH---QKGKCRYSVKGKAGYCSRFHILPQ 229

Query: 493 NGSETMKKILYKYGPLSVGLNSHL--IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
              ET+K  + + GP++V +N+ L   H Y G     N   C+P  + HAVL+VGYG  +
Sbjct: 230 GDEETLKATVARVGPVAVAVNAMLASFHLYRGGLY--NVPNCNPKFINHAVLVVGYGSSE 287

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
              +WL +NSWG    +EG+ ++ R   N CGI   A Y ++
Sbjct: 288 GQDFWLVKNSWGSAWGEEGYIRLARNKKNLCGIASFAVYPSL 329



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 961  NDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 1019
            N   C+P  + HAVL+VGYG  +   +WLV+NSWG    +EG+ ++ R   N CGI   A
Sbjct: 265  NVPNCNPKFINHAVLVVGYGSSEGQDFWLVKNSWGSAWGEEGYIRLARNKKNLCGIASFA 324

Query: 1020 GYATI 1024
             Y ++
Sbjct: 325  VYPSL 329


>gi|198457180|ref|XP_001360577.2| GA18475 [Drosophila pseudoobscura pseudoobscura]
 gi|198135890|gb|EAL25152.2| GA18475 [Drosophila pseudoobscura pseudoobscura]
          Length = 372

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 154/314 (49%), Gaps = 32/314 (10%)

Query: 655 LETFKAFIVKRGRQY--ANDEEIKERFEYFKQD----GHKKHERYGTS------EFSDRS 702
           ++ F  F+ + G+ Y  A D+ + E     +++    G+    +  +S       FSD +
Sbjct: 61  VQNFGDFLAQSGKNYLSAADKALHEGVFAARKNLVDAGNDAFAKGASSYQLAVNAFSDLT 120

Query: 703 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
             E L + TG + S +   +  A+R+     L  V     +P+++DWR+K        Q 
Sbjct: 121 KSEFLSQLTGLRKSSQGASKATANRK-----LASVPAGASIPESFDWRQKGGVTSVKFQG 175

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK---QCSGCDGCFFEPSIEYTH- 817
            CGSCWAF+  G +EG    KTG L   S+  LV+C       SGCDG F E ++ + + 
Sbjct: 176 TCGSCWAFATTGAIEGHIFRKTGTLPNLSEQNLVDCGTLEFGLSGCDGGFQEYAMAFINE 235

Query: 818 -QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSV 875
            Q G+     YPY +    K  C Y K+      TG   +       MKK++   GPL+ 
Sbjct: 236 EQKGVSKADGYPYID---NKDTCKYSKNLSGAQITGFATIPPKDEALMKKVIATLGPLAC 292

Query: 876 LLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            LN    L+   +G     +DE C+  +  H++L+VGYG +    YW+V+NSW  +  +E
Sbjct: 293 SLNGLETLLQYKSGI---YSDEKCNEGEPNHSILVVGYGSEKGQDYWIVKNSWDKVWGEE 349

Query: 934 GFFKIERGNNACGI 947
           G+F++ RGNN CGI
Sbjct: 350 GYFRLPRGNNFCGI 363



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 151/316 (47%), Gaps = 35/316 (11%)

Query: 289 LETFKAFIVKRGRQY--ANDEEIKERFEYFKQD----GHKKHERYGTS------EFSDRS 336
           ++ F  F+ + G+ Y  A D+ + E     +++    G+    +  +S       FSD +
Sbjct: 61  VQNFGDFLAQSGKNYLSAADKALHEGVFAARKNLVDAGNDAFAKGASSYQLAVNAFSDLT 120

Query: 337 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
             E L + TG + S +   +  A+R+     L  V     +P+++DWR+K        Q 
Sbjct: 121 KSEFLSQLTGLRKSSQGASKATANRK-----LASVPAGASIPESFDWRQKGGVTSVKFQG 175

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---- 451
            CGSCWAF+  G +EG    KTG L   S+  LV+C     G  GCDG  Q  EY     
Sbjct: 176 TCGSCWAFATTGAIEGHIFRKTGTLPNLSEQNLVDCGTLEFGLSGCDGGFQ--EYAMAFI 233

Query: 452 --HQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYGPL 508
              Q G+     YPY +    K  C Y K+      TG   +       MKK++   GPL
Sbjct: 234 NEEQKGVSKADGYPYID---NKDTCKYSKNLSGAQITGFATIPPKDEALMKKVIATLGPL 290

Query: 509 SVGLNS--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           +  LN    L+ + +G     +DE C+  +  H++L+VGYG +    YW+ +NSW  +  
Sbjct: 291 ACSLNGLETLLQYKSGI---YSDEKCNEGEPNHSILVVGYGSEKGQDYWIVKNSWDKVWG 347

Query: 567 DEGFFKIERGNNACGI 582
           +EG+F++ RGNN CGI
Sbjct: 348 EEGYFRLPRGNNFCGI 363



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 14/223 (6%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           L  V     +P+++DWR+K        Q  CGSCWAF+  G +EG    KTG L   S+ 
Sbjct: 147 LASVPAGASIPESFDWRQKGGVTSVKFQGTCGSCWAFATTGAIEGHIFRKTGTLPNLSEQ 206

Query: 62  QLVECAK---QCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANGEKFKCAYDKS-KV 115
            LV+C       SGCDG F E ++ + +  Q G+     YPY +    K  C Y K+   
Sbjct: 207 NLVDCGTLEFGLSGCDGGFQEYAMAFINEEQKGVSKADGYPYID---NKDTCKYSKNLSG 263

Query: 116 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGH 173
              TG   +       MKK++   GPL+  LN    L+   +G     +DE C+  +  H
Sbjct: 264 AQITGFATIPPKDEALMKKVIATLGPLACSLNGLETLLQYKSGI---YSDEKCNEGEPNH 320

Query: 174 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           ++L+VGYG +    YW+V+NSW  +  +EG+F++ RGNN CGI
Sbjct: 321 SILVVGYGSEKGQDYWIVKNSWDKVWGEEGYFRLPRGNNFCGI 363



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 2/70 (2%)

Query: 946  GIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFK 1005
            G+E +  Y +   + +DE C+  +  H++L+VGYG +    YW+V+NSW  +  +EG+F+
Sbjct: 296  GLETLLQYKS--GIYSDEKCNEGEPNHSILVVGYGSEKGQDYWIVKNSWDKVWGEEGYFR 353

Query: 1006 IERGNNACGI 1015
            + RGNN CGI
Sbjct: 354  LPRGNNFCGI 363


>gi|41152540|gb|AAR99519.1| cathepsin L protein [Fasciola hepatica]
          Length = 239

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 113/216 (52%), Gaps = 12/216 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 21  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 80

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y++   V   TG   +H  
Sbjct: 81  GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNRQLGVAKVTGYYTVHSG 137

Query: 128 GSETMKKILYKYGP--LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++   GP  ++V + SD +   +G       +TC P+ L HAVL VGYG Q  
Sbjct: 138 SEVELKNLVGSEGPAAIAVDVESDFMMYRSGI---YQSQTCLPFALNHAVLAVGYGTQGG 194

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 220
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 195 TDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 230



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 112/216 (51%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 21  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 80

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y++   V   TG   +H  
Sbjct: 81  GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNRQLGVAKVTGYYTVHSG 137

Query: 859 GSETMKKILYKYGP--LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++   GP  ++V + SD +   +G       +TC P+ L HAVL VGYG Q  
Sbjct: 138 SEVELKNLVGSEGPAAIAVDVESDFMMYRSGI---YQSQTCLPFALNHAVLAVGYGTQGG 194

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 951
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 195 TDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 230



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 114/218 (52%), Gaps = 15/218 (6%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 21  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 80

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC G  +E   +Y  Q GLE+E  YPY    G+   C Y++   V   TG  +   
Sbjct: 81  -GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNRQLGVAKVTGY-YTVH 135

Query: 493 NGSET-MKKILYKYGP--LSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           +GSE  +K ++   GP  ++V + S  + + +G       +TC P+ L HAVL VGYG Q
Sbjct: 136 SGSEVELKNLVGSEGPAAIAVDVESDFMMYRSGI---YQSQTCLPFALNHAVLAVGYGTQ 192

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIA 586
               YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 193 GGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 230



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            +   +TC P+ L HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  
Sbjct: 169  IYQSQTCLPFALNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIAS 228

Query: 1018 IA 1019
            +A
Sbjct: 229  LA 230


>gi|47224192|emb|CAG13112.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 327

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 152/315 (48%), Gaps = 33/315 (10%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEIL 707
           + FK+++    + Y+  +E  +R + F        K +G       G ++FSD +  E  
Sbjct: 27  QHFKSWMALHNKAYS-VQEFHQRLQIFTENKRRIEKHNGGNHSFTMGLNQFSDMTFAEF- 84

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSC 766
            +  F WSE   +   A +    K       + P P++ DWR K N   P  +Q ACGSC
Sbjct: 85  -RKRFLWSEP--QNCSATKGSYMKT------NSPQPESIDWRTKGNYVTPVKNQGACGSC 135

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLES 823
           W FS  G LE   AI TGKLV  S+ QLV+CA   +  GC+G     + EY  +  GL +
Sbjct: 136 WTFSTTGCLESVTAINTGKLVPLSEQQLVDCAWDFNNHGCNGGLPSQAFEYIKYNKGLMT 195

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETMKKILYKYGPLSVL--LNS 879
           E  YPY    G   KC Y       F  K+ ++      + M+  +  + P+S    +  
Sbjct: 196 ESGYPYTAFEG---KCKYKPELAAAFV-KNVVNITAYDEKGMEDAVATHNPVSFAFEVTD 251

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-NIPYWLVRNSWGPIGPDEGFFKI 938
           D +H Y G     +    +   + HAVL VGYG  + ++PYW+V+NSWGP   + G+F I
Sbjct: 252 DFMH-YKGGVYSSSRCHKTTDKVNHAVLAVGYGNNNSSVPYWIVKNSWGPYWGENGYFLI 310

Query: 939 ERGNNACGIEQIAGY 953
           ERG N CG+   + Y
Sbjct: 311 ERGKNMCGLAACSSY 325



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 149/319 (46%), Gaps = 40/319 (12%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEIL 341
           + FK+++    + Y+  +E  +R + F        K +G       G ++FSD +  E  
Sbjct: 27  QHFKSWMALHNKAYS-VQEFHQRLQIFTENKRRIEKHNGGNHSFTMGLNQFSDMTFAEF- 84

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSC 400
            +  F WSE   +   A +    K       + P P++ DWR K N   P  +Q ACGSC
Sbjct: 85  -RKRFLWSEP--QNCSATKGSYMKT------NSPQPESIDWRTKGNYVTPVKNQGACGSC 135

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLES 458
           W FS  G LE   AI TGKLV  S+ QLV+CA   +  G   GL  Q  EY  +  GL +
Sbjct: 136 WTFSTTGCLESVTAINTGKLVPLSEQQLVDCAWDFNNHGCNGGLPSQAFEYIKYNKGLMT 195

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG--SETMKKILYKYGPLSVG--LNS 514
           E  YPY    G   KC Y       F  K+ +       + M+  +  + P+S    +  
Sbjct: 196 ESGYPYTAFEG---KCKYKPELAAAFV-KNVVNITAYDEKGMEDAVATHNPVSFAFEVTD 251

Query: 515 HLIHF----YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-DIPYWLARNSWGPIGPDEG 569
             +H+    Y+ +   K  +      + HAVL VGYG  +  +PYW+ +NSWGP   + G
Sbjct: 252 DFMHYKGGVYSSSRCHKTTD-----KVNHAVLAVGYGNNNSSVPYWIVKNSWGPYWGENG 306

Query: 570 FFKIERGNNACGIEQIAGY 588
           +F IERG N CG+   + Y
Sbjct: 307 YFLIERGKNMCGLAACSSY 325



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 118/227 (51%), Gaps = 14/227 (6%)

Query: 5   VEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           ++ + P P++ DWR K N   P  +Q  CGSCW FS  G LE   AI TGKLV  S+ QL
Sbjct: 104 MKTNSPQPESIDWRTKGNYVTPVKNQGACGSCWTFSTTGCLESVTAINTGKLVPLSEQQL 163

Query: 64  VECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           V+CA   +  GC+G     + EY  +  GL +E  YPY    G   KC Y       F  
Sbjct: 164 VDCAWDFNNHGCNGGLPSQAFEYIKYNKGLMTESGYPYTAFEG---KCKYKPELAAAFV- 219

Query: 121 KDFLHFNG--SETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 176
           K+ ++      + M+  +  + P+S    +  D +H Y G     +    +   + HAVL
Sbjct: 220 KNVVNITAYDEKGMEDAVATHNPVSFAFEVTDDFMH-YKGGVYSSSRCHKTTDKVNHAVL 278

Query: 177 LVGYGKQD-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
            VGYG  + ++PYW+V+NSWGP   + G+F IERG N CG+   + Y
Sbjct: 279 AVGYGNNNSSVPYWIVKNSWGPYWGENGYFLIERGKNMCGLAACSSY 325



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)

Query: 970  LGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            + HAVL VGYG  +  +PYW+V+NSWGP   + G+F IERG N CG+   + Y
Sbjct: 273  VNHAVLAVGYGNNNSSVPYWIVKNSWGPYWGENGYFLIERGKNMCGLAACSSY 325


>gi|71084302|gb|AAZ23596.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 142/304 (46%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS+ G +E Q+A+   +L   S+ QLV C    SGCGG   + Q  E+        + 
Sbjct: 151 WAFSVVGNIESQWAVAGHRLTALSEQQLVSCDDMDSGCGG-GLMTQAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY +  G   +C      V       ++    +ET M   L K GP+S+G+++  
Sbjct: 210 TEDSYPYVSTFGYVPECTNSSQLVPGARIDGYVMIESNETVMAAWLAKSGPISIGVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y+G  +     +C+   L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G
Sbjct: 270 FMSYHGGVL----TSCAGKQLNHGVLLVGYNMTGEVPYWVIKNSWGENWGEKGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 139/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS+ G +E Q+A+   +L   S+ QLV C    SGC G     + E+        + +
Sbjct: 151 WAFSVVGNIESQWAVAGHRLTALSEQQLVSCDDMDSGCGGGLMTQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY +  G   +C      V       ++    +ET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSTFGYVPECTNSSQLVPGARIDGYVMIESNETVMAAWLAKSGPISIGVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+G  +     +C+   L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHGGVL----TSCAGKQLNHGVLLVGYNMTGEVPYWVIKNSWGENWGEKGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS+ G +E Q+A+   +L   S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSVVGNIESQWAVAGHRLTALSEQQLVSCDDMD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC G     + E+        + +E  YPY +  G   +C      V       ++   
Sbjct: 186 SGCGGGLMTQAFEWLLRNMNGTMFTEDSYPYVSTFGYVPECTNSSQLVPGARIDGYVMIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            +ET M   L K GP+S+ +++     Y+G  +     +C+   L H VLLVGY     +
Sbjct: 246 SNETVMAAWLAKSGPISIGVDASSFMSYHGGVL----TSCAGKQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGENWGEKGYVRVTMGVNAC 329



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCAGKQLNHGVLLVGYNMTGEVPYWVIKNSWGENWGEKGYVRVTMGVNAC 329


>gi|7271897|gb|AAF44679.1|AF239268_1 cathepsin L, partial [Fasciola gigantica]
          Length = 219

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 111/216 (51%), Gaps = 12/216 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR         DQ DCGSCWAFS  G +EGQ+    G  V FS+ QLV+C+   
Sbjct: 1   VPDKIDWRDSGYVTKVKDQEDCGSCWAFSTTGTMEGQFMKNIGFNVSFSEQQLVDCSSDF 60

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + EY  + GLE E  YPY+   G    C YD+   V   TG   +H  
Sbjct: 61  GNNGCRGGLMEIAYEYLRRFGLEIESTYPYRAVEG---PCRYDRRLGVAKVTGYYIVHSG 117

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               ++ ++   GP +V L+  SD +   +G       +TCSP  L H VL VGYG Q  
Sbjct: 118 DEVELQNLVGIEGPAAVALDVESDFVMYRSGI---YQSQTCSPDRLNHGVLAVGYGTQSG 174

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 175 TDYWIVKNSWGTWWGEGGYIRMVRNRGNMCGIASMA 210



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 110/216 (50%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR         DQ  CGSCWAFS  G +EGQ+    G  V FS+ QLV+C+   
Sbjct: 1   VPDKIDWRDSGYVTKVKDQEDCGSCWAFSTTGTMEGQFMKNIGFNVSFSEQQLVDCSSDF 60

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + EY  + GLE E  YPY+   G    C YD+   V   TG   +H  
Sbjct: 61  GNNGCRGGLMEIAYEYLRRFGLEIESTYPYRAVEG---PCRYDRRLGVAKVTGYYIVHSG 117

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               ++ ++   GP +V L+  SD +   +G       +TCSP  L H VL VGYG Q  
Sbjct: 118 DEVELQNLVGIEGPAAVALDVESDFVMYRSGI---YQSQTCSPDRLNHGVLAVGYGTQSG 174

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 175 TDYWIVKNSWGTWWGEGGYIRMVRNRGNMCGIASMA 210



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 109/217 (50%), Gaps = 13/217 (5%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR         DQ  CGSCWAFS  G +EGQ+    G  V FS+ QLV+C+   
Sbjct: 1   VPDKIDWRDSGYVTKVKDQEDCGSCWAFSTTGTMEGQFMKNIGFNVSFSEQQLVDCSSDF 60

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC G  +E   EY  + GLE E  YPYR   G    C YD+   V   TG   ++ 
Sbjct: 61  -GNNGCRGGLMEIAYEYLRRFGLEIESTYPYRAVEG---PCRYDRRLGVAKVTGYYIVHS 116

Query: 493 NGSETMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                ++ ++   GP +V L+  S  + + +G       +TCSP  L H VL VGYG Q 
Sbjct: 117 GDEVELQNLVGIEGPAAVALDVESDFVMYRSGI---YQSQTCSPDRLNHGVLAVGYGTQS 173

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
              YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 174 GTDYWIVKNSWGTWWGEGGYIRMVRNRGNMCGIASMA 210



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 17/102 (16%)

Query: 934  GFFKIERGN-----NACGIEQIAGYATIDV----------VKNDETCSPYDLGHAVLLVG 978
            G++ +  G+     N  GIE  A  A +DV          +   +TCSP  L H VL VG
Sbjct: 110  GYYIVHSGDEVELQNLVGIEGPAAVA-LDVESDFVMYRSGIYQSQTCSPDRLNHGVLAVG 168

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 1019
            YG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 169  YGTQSGTDYWIVKNSWGTWWGEGGYIRMVRNRGNMCGIASMA 210


>gi|228861649|ref|YP_002854669.1| cathepsin [Euproctis pseudoconspersa nucleopolyhedrovirus]
 gi|226425097|gb|ACO53509.1| cathepsin [Euproctis pseudoconspersa nucleopolyhedrovirus]
          Length = 334

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 159/323 (49%), Gaps = 24/323 (7%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSE 697
           S T+D     + F+ F+    + Y +  E  +R+  FK +  + + +        Y  ++
Sbjct: 25  SDTYDPLKAADYFELFVANYNKNYTDPLEKTKRYHIFKDNLEEINNKNKSNDTAVYRINK 84

Query: 698 FSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
           FSD S  E++ K TG          +  +     K+++  +  G  P  +DWR++N   P
Sbjct: 85  FSDLSTNELISKYTGLN--------VPGETANFCKIVVLDQPPGKGPLNFDWRQQNKVTP 136

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT 816
             +Q ACG+CWAF+    +E QYAI+    ++ S+ Q+++C     GC G     + E  
Sbjct: 137 IKNQGACGACWAFATLASIESQYAIRNNVHLDLSEQQMIDCDYVDMGCYGGLLHTAFEQM 196

Query: 817 HQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSV 875
            Q  G+E E+ YPY+  N      + ++  VK+     +L     E +K +L   GPL +
Sbjct: 197 IQMGGVEEERQYPYEGVNNNCRLKSDERFVVKVKGCYRYLVMR-EEKLKDLLRAVGPLPM 255

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
            +++  I +Y     R     C    L HAVLLVGYG ++ +P+W  +N+WG    ++G+
Sbjct: 256 AIDASSIFNY----YRGVINYCGNNGLNHAVLLVGYGVENGVPFWTFKNTWGDDWGEDGY 311

Query: 936 FKIERGNNACG-IEQIAGYATID 957
           F++ +  +ACG + ++   A I+
Sbjct: 312 FRVRQNVDACGMLNELTSSAVIE 334



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 160/327 (48%), Gaps = 31/327 (9%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSE 331
           S T+D     + F+ F+    + Y +  E  +R+  FK +  + + +        Y  ++
Sbjct: 25  SDTYDPLKAADYFELFVANYNKNYTDPLEKTKRYHIFKDNLEEINNKNKSNDTAVYRINK 84

Query: 332 FSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
           FSD S  E++ K TG          +  +     K+++  +  G  P  +DWR++N   P
Sbjct: 85  FSDLSTNELISKYTGLN--------VPGETANFCKIVVLDQPPGKGPLNFDWRQQNKVTP 136

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG---CDGLEQP 447
             +Q ACG+CWAF+    +E QYAI+    ++ S+ Q+++C     GC G       EQ 
Sbjct: 137 IKNQGACGACWAFATLASIESQYAIRNNVHLDLSEQQMIDCDYVDMGCYGGLLHTAFEQM 196

Query: 448 IEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGP 507
           I+     G+E E+ YPY   N      + ++  VK+     +L     E +K +L   GP
Sbjct: 197 IQ---MGGVEEERQYPYEGVNNNCRLKSDERFVVKVKGCYRYLVMR-EEKLKDLLRAVGP 252

Query: 508 LSVGLN-SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           L + ++ S + ++Y G         C    L HAVLLVGYG ++ +P+W  +N+WG    
Sbjct: 253 LPMAIDASSIFNYYRGVI-----NYCGNNGLNHAVLLVGYGVENGVPFWTFKNTWGDDWG 307

Query: 567 DEGFFKIERGNNACG-IEQIAGYATID 592
           ++G+F++ +  +ACG + ++   A I+
Sbjct: 308 EDGYFRVRQNVDACGMLNELTSSAVIE 334



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 116/220 (52%), Gaps = 7/220 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P  +DWR++N   P  +Q  CG+CWAF+    +E QYAI+    ++ S+ Q+++C  
Sbjct: 120 GKGPLNFDWRQQNKVTPIKNQGACGACWAFATLASIESQYAIRNNVHLDLSEQQMIDCDY 179

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              GC G     + E   Q  G+E E+ YPY+  N      + ++  VK+     +L   
Sbjct: 180 VDMGCYGGLLHTAFEQMIQMGGVEEERQYPYEGVNNNCRLKSDERFVVKVKGCYRYLVMR 239

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             E +K +L   GPL + +++  I +Y     R     C    L HAVLLVGYG ++ +P
Sbjct: 240 -EEKLKDLLRAVGPLPMAIDASSIFNY----YRGVINYCGNNGLNHAVLLVGYGVENGVP 294

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATID 226
           +W  +N+WG    ++G+F++ +  +ACG + ++   A I+
Sbjct: 295 FWTFKNTWGDDWGEDGYFRVRQNVDACGMLNELTSSAVIE 334



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYAT 1023
            C    L HAVLLVGYG ++ +P+W  +N+WG    ++G+F++ +  +ACG + ++   A 
Sbjct: 273  CGNNGLNHAVLLVGYGVENGVPFWTFKNTWGDDWGEDGYFRVRQNVDACGMLNELTSSAV 332

Query: 1024 ID 1025
            I+
Sbjct: 333  IE 334


>gi|297688135|ref|XP_002821545.1| PREDICTED: cathepsin W [Pongo abelii]
          Length = 376

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 156/346 (45%), Gaps = 43/346 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFANNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G       Y R       + + +   E +  VP   DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEELEESVPFTCDWRKVAGAISPIKDQKNCNC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  + I     V+ S  +L++C +   GC G F ++  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRINFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIH 883
           KDYP++       +C + K   K+   +DF+   N    + + L  YGP++V +N  L+ 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKLLQ 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN--------------------IPYWLVR 923
            Y    I+    TC P  + H+VLLVG+G   +                     PYW+++
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGNVKSEEGIWAETVLSQSQPQPPHPTPYWILK 330

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV--VKNDETCSP 967
           NSWG    ++G+F++ RG+N CGI +    A +    +K   +C P
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARVQKPDMKPRVSCPP 376



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 148/333 (44%), Gaps = 40/333 (12%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFANNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G       Y R       + + +   E +  VP   DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEELEESVPFTCDWRKVAGAISPIKDQKNCNC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  + I     V+ S  +L++C +   GC G    +  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRINFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSETMKKILYKYGPLSVGLNSHLIH 518
           KDYP++ G     +C + K   K+   +DF+   N    + + L  YGP++V +N  L+ 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKLLQ 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDDIPYWLAR 558
            Y    I+    TC P  + H+VLLVG+G                         PYW+ +
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGNVKSEEGIWAETVLSQSQPQPPHPTPYWILK 330

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 25/243 (10%)

Query: 6   EKDGPVPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           E +  VP   DWRK      P  DQ +C  CWA + AG +E  + I     V+ S  +L+
Sbjct: 123 ELEESVPFTCDWRKVAGAISPIKDQKNCNCCWAMAAAGNIETLWRINFWDFVDVSVQELL 182

Query: 65  ECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C +   GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF
Sbjct: 183 DCGRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDF 240

Query: 124 LHF-NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +   N    + + L  YGP++V +N  L+  Y    I+    TC P  + H+VLLVG+G 
Sbjct: 241 IMLQNNEHRIAQYLATYGPITVTINMKLLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGN 300

Query: 183 QDN--------------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
             +                     PYW+++NSWG    ++G+F++ RG+N CGI +    
Sbjct: 301 VKSEEGIWAETVLSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360

Query: 223 ATI 225
           A +
Sbjct: 361 ARV 363



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 20/81 (24%)

Query: 964  TCSPYDLGHAVLLVGYGK--------------------QDDIPYWLVRNSWGPIGPDEGF 1003
            TC P  + H+VLLVG+G                         PYW+++NSWG    ++G+
Sbjct: 283  TCDPQLVDHSVLLVGFGNVKSEEGIWAETVLSQSQPQPPHPTPYWILKNSWGAQWGEKGY 342

Query: 1004 FKIERGNNACGIEQIAGYATI 1024
            F++ RG+N CGI +    A +
Sbjct: 343  FRLHRGSNTCGITKFPLTARV 363


>gi|157864847|ref|XP_001681132.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124426|emb|CAJ02282.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 443

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 139/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAVKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAVKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|324513891|gb|ADY45690.1| Cysteine proteinase [Ascaris suum]
          Length = 398

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 27/313 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYF----------KQDGHKKHERYGTSEFSDRSP 703
           +L++F  F+ K  + Y +  +  +RF  +           +  + +   YG ++F+D S 
Sbjct: 87  LLDSFMEFMHKYDKVYVDSAQFVKRFRIYVNNMANIDALNERNYGRSIIYGENQFADWSE 146

Query: 704 EE---ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
           +E   IL   GF   +  ++R +   +  E M+   E    +P+ +DWR  NV  P   Q
Sbjct: 147 DEFRQILLPRGF--YKNFHKRAIFIDQPDEIMMPRKE---IIPEHFDWRPYNVVTPVKAQ 201

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG 820
             CGSCWAF+  G +E  YAI TG+L   S+ QL++C  + + CDG   + ++ Y ++ G
Sbjct: 202 LNCGSCWAFATTGTVESAYAIGTGELKSLSEQQLLDCNVENNACDGGDIDKALRYVYEEG 261

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 880
           L +E DYPY      + +  Y + +        FLH + +  +  +++  GP++V +N  
Sbjct: 262 LMTEYDYPYV---AHRQETCYLRGETTRIKAAVFLHQDEASIIDWLIHN-GPVNVGVNVT 317

Query: 881 L-IHDYNGTPIRKNDETCSPYDLG-HAVLLVGYG--KQDNIPYWLVRNSWG-PIGPDEGF 935
             +  Y G     N   C    +G HA+ +VGYG   + N  YW+V+NSWG   G + G+
Sbjct: 318 ADMKAYKGGVYTPNKWECENKIIGTHAMNIVGYGTWNKTNEKYWIVKNSWGQSYGVENGY 377

Query: 936 FKIERGNNACGIE 948
               RG N+CGIE
Sbjct: 378 VYFARGINSCGIE 390



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 159/314 (50%), Gaps = 28/314 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYF----------KQDGHKKHERYGTSEFSDRSP 337
           +L++F  F+ K  + Y +  +  +RF  +           +  + +   YG ++F+D S 
Sbjct: 87  LLDSFMEFMHKYDKVYVDSAQFVKRFRIYVNNMANIDALNERNYGRSIIYGENQFADWSE 146

Query: 338 EE---ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
           +E   IL   GF   +  ++R +   +  E M+   E    +P+ +DWR  NV  P   Q
Sbjct: 147 DEFRQILLPRGF--YKNFHKRAIFIDQPDEIMMPRKE---IIPEHFDWRPYNVVTPVKAQ 201

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQA 454
             CGSCWAF+  G +E  YAI TG+L   S+ QL++C  + + C G D +++ + Y ++ 
Sbjct: 202 LNCGSCWAFATTGTVESAYAIGTGELKSLSEQQLLDCNVENNACDGGD-IDKALRYVYEE 260

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN- 513
           GL +E DYPY      + +  Y + +        FL+ + +  +  +++  GP++VG+N 
Sbjct: 261 GLMTEYDYPYV---AHRQETCYLRGETTRIKAAVFLHQDEASIIDWLIHN-GPVNVGVNV 316

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLG-HAVLLVGYG--KQDDIPYWLARNSWG-PIGPDEG 569
           +  +  Y G     N   C    +G HA+ +VGYG   + +  YW+ +NSWG   G + G
Sbjct: 317 TADMKAYKGGVYTPNKWECENKIIGTHAMNIVGYGTWNKTNEKYWIVKNSWGQSYGVENG 376

Query: 570 FFKIERGNNACGIE 583
           +    RG N+CGIE
Sbjct: 377 YVYFARGINSCGIE 390



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR  NV  P   Q +CGSCWAF+  G +E  YAI TG+L   S+ QL++C  + 
Sbjct: 183 IPEHFDWRPYNVVTPVKAQLNCGSCWAFATTGTVESAYAIGTGELKSLSEQQLLDCNVEN 242

Query: 71  SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 130
           + CDG   + ++ Y ++ GL +E DYPY      + +  Y + +        FLH + + 
Sbjct: 243 NACDGGDIDKALRYVYEEGLMTEYDYPYV---AHRQETCYLRGETTRIKAAVFLHQDEAS 299

Query: 131 TMKKILYKYGPLSVLLNSDL-IHDYNGTPIRKNDETCSPYDLG-HAVLLVGYG--KQDNI 186
            +  +++  GP++V +N    +  Y G     N   C    +G HA+ +VGYG   + N 
Sbjct: 300 IIDWLIHN-GPVNVGVNVTADMKAYKGGVYTPNKWECENKIIGTHAMNIVGYGTWNKTNE 358

Query: 187 PYWLVRNSWG-PIGPDEGFFKIERGNNACGIE 217
            YW+V+NSWG   G + G+    RG N+CGIE
Sbjct: 359 KYWIVKNSWGQSYGVENGYVYFARGINSCGIE 390


>gi|238481789|gb|ACR43934.1| cathepsin L-like cysteine proteinase [Haliotis diversicolor
           supertexta]
          Length = 347

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 146/293 (49%), Gaps = 21/293 (7%)

Query: 309 IKERFEYFKQDGHK-----KHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 363
            K+  +Y ++   K     K    G ++F+D   EE     G +  +  Y R V     +
Sbjct: 66  FKQNLQYIEEHNKKFSLGQKSYYLGINQFADMKNEEFRMYNGLR-RDYNYSREVQCSNHL 124

Query: 364 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 423
               +        PD  DWRKK       +Q  CGSCW+FS  G LEGQ+  K+GKLV  
Sbjct: 125 TPEYL------VAPDEVDWRKKGYVTAVKNQGQCGSCWSFSTTGSLEGQHFHKSGKLVSL 178

Query: 424 SKSQLVECAKQCSGCGGCDG--LEQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSK 480
           S+ QLV+C+ +  G  GC+G  ++Q  EY     G+E+E++YPY   +  + +C + KS+
Sbjct: 179 SEQQLVDCSGKF-GNEGCNGGLMDQAFEYIITNGGIETEEEYPY---DARQERCHFKKSE 234

Query: 481 VKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGH 539
           V           +G ET +K  + + GP+S+ +++    F   +    ++  CS  +L H
Sbjct: 235 VAATASGCVDVKSGDETDLKNSVAEVGPVSIAIDASHQSFQLYSGGVYDEPKCSSTELDH 294

Query: 540 AVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
            VL+VGYG  D   YWL +NSWG     EG+ K+ R  +N CG+   A Y  +
Sbjct: 295 GVLVVGYGTDDGQDYWLVKNSWGTTWGLEGYVKMSRNQDNQCGVATQASYPLV 347



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 146/294 (49%), Gaps = 24/294 (8%)

Query: 675 IKERFEYFKQDGHK-----KHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 729
            K+  +Y ++   K     K    G ++F+D   EE     G +  +  Y R V     +
Sbjct: 66  FKQNLQYIEEHNKKFSLGQKSYYLGINQFADMKNEEFRMYNGLR-RDYNYSREVQCSNHL 124

Query: 730 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 789
               +        PD  DWRKK       +Q  CGSCW+FS  G LEGQ+  K+GKLV  
Sbjct: 125 TPEYL------VAPDEVDWRKKGYVTAVKNQGQCGSCWSFSTTGSLEGQHFHKSGKLVSL 178

Query: 790 SKSQLVECAKQC--SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKV 846
           S+ QLV+C+ +    GC+G   + + EY     G+E+E++YPY   +  + +C + KS+V
Sbjct: 179 SEQQLVDCSGKFGNEGCNGGLMDQAFEYIITNGGIETEEEYPY---DARQERCHFKKSEV 235

Query: 847 KLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLG 903
                      +G ET +K  + + GP+S+ +++       Y+G     ++  CS  +L 
Sbjct: 236 AATASGCVDVKSGDETDLKNSVAEVGPVSIAIDASHQSFQLYSGGVY--DEPKCSSTELD 293

Query: 904 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           H VL+VGYG  D   YWLV+NSWG     EG+ K+ R  +N CG+   A Y  +
Sbjct: 294 HGVLVVGYGTDDGQDYWLVKNSWGTTWGLEGYVKMSRNQDNQCGVATQASYPLV 347



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 122/222 (54%), Gaps = 12/222 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD  DWRKK       +Q  CGSCW+FS  G LEGQ+  K+GKLV  S+ QLV+C+ + 
Sbjct: 131 APDEVDWRKKGYVTAVKNQGQCGSCWSFSTTGSLEGQHFHKSGKLVSLSEQQLVDCSGKF 190

Query: 71  --SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              GC+G   + + EY     G+E+E++YPY   +  + +C + KS+V           +
Sbjct: 191 GNEGCNGGLMDQAFEYIITNGGIETEEEYPY---DARQERCHFKKSEVAATASGCVDVKS 247

Query: 128 GSET-MKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
           G ET +K  + + GP+S+ +++       Y+G     ++  CS  +L H VL+VGYG  D
Sbjct: 248 GDETDLKNSVAEVGPVSIAIDASHQSFQLYSGGVY--DEPKCSSTELDHGVLVVGYGTDD 305

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
              YWLV+NSWG     EG+ K+ R  +N CG+   A Y  +
Sbjct: 306 GQDYWLVKNSWGTTWGLEGYVKMSRNQDNQCGVATQASYPLV 347



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V ++  CS  +L H VL+VGYG  D   YWLV+NSWG     EG+ K+ R  +N CG+  
Sbjct: 281  VYDEPKCSSTELDHGVLVVGYGTDDGQDYWLVKNSWGTTWGLEGYVKMSRNQDNQCGVAT 340

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 341  QASYPLV 347


>gi|15824691|gb|AAL09443.1| cysteine protease [Leishmania donovani]
          Length = 443

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 145/307 (47%), Gaps = 26/307 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT--HQAGLE-S 823
           WAFS  G +E Q+A     LV  S+ QLV C  + +GC+G     + E+   H  G+  +
Sbjct: 151 WAFSAVGNIESQWARVGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C      V       ++    +ET M   L + GP+++ +++   
Sbjct: 211 EKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY K   +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVAMGK 326

Query: 943 NACGIEQ 949
           NAC + +
Sbjct: 327 NACLLSE 333



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 145/308 (47%), Gaps = 27/308 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT--HQAGLE- 457
           WAFS  G +E Q+A     LV  S+ QLV C  + +GC G   L Q  E+   H  G+  
Sbjct: 151 WAFSAVGNIESQWARVGHGLVSLSEQQLVSCDDKDNGCNGGLML-QAFEWLLRHMYGIVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +EK YPY +GNG+  +C      V       ++    +ET M   L + GP+++ +++  
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY K   +PYW+ +NSWG    ++G+ ++  G
Sbjct: 270 FMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVAMG 325

Query: 577 NNACGIEQ 584
            NAC + +
Sbjct: 326 KNACLLSE 333



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 8/212 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A     LV  S+ QLV C  + 
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWARVGHGLVSLSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEYT--HQAGLE-SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC+G     + E+   H  G+  +EK YPY + NG+  +C      V       ++   
Sbjct: 186 NGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            +ET M   L + GP+++ +++     Y    +     +C+   L H VLLVGY K   +
Sbjct: 246 SNETVMAAWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           PYW+++NSWG    ++G+ ++  G NAC + +
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVAMGKNACLLSE 333


>gi|226476132|emb|CAX72156.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 157/319 (49%), Gaps = 31/319 (9%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGL 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC G F + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGGGFMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSV-LLN 878
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SV ++ 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            D +  Y       ND  C   D+ H VL+VGYG++    YWL++NSWG +   +G+FK+
Sbjct: 254 LDSLTMYKSGVFESND--CKHADINHGVLVVGYGEEHGKDYWLIKNSWGDLWGSKGYFKL 311

Query: 939 ERG-NNACGIEQIAGYATI 956
            R  +N CG+   A +  +
Sbjct: 312 RRNKHNMCGVASNASFPLL 330



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR         +Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSKWDWRDHGAVTAVKNQGLCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYG++  
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESND--CKHADINHGVLVVGYGEEHG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 290 KDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 156/320 (48%), Gaps = 32/320 (10%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGL 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGGCDGLEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GCGG   ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGG-GFMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN 513
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG+ 
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 514 S-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +   +  Y       ND  C   D+ H VL+VGYG++    YWL +NSWG +   +G+FK
Sbjct: 253 ALDSLTMYKSGVFESND--CKHADINHGVLVVGYGEEHGKDYWLIKNSWGDLWGSKGYFK 310

Query: 573 IERG-NNACGIEQIAGYATI 591
           + R  +N CG+   A +  +
Sbjct: 311 LRRNKHNMCGVASNASFPLL 330



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ H VL+VGYG++    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKHADINHGVLVVGYGEEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|401430387|ref|XP_003886572.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|356491640|emb|CBZ40951.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 332

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 137/301 (45%), Gaps = 22/301 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C     GC G     + ++  Q     L +E  
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCSGGLMLQAFDWLLQNTNGHLHTEDS 213

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+ + S++ +    D     GS  + M   L K GP+++ L++     
Sbjct: 214 YPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 272

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 273 YKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 328

Query: 945 C 945
           C
Sbjct: 329 C 329



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 139/302 (46%), Gaps = 23/302 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C     GC G   L Q  ++  Q     L +E 
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCSGGLML-QAFDWLLQNTNGHLHTED 212

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+ + S++ +    D     GS  + M   L K GP+++ L++    
Sbjct: 213 SYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 271

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 272 SYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 327

Query: 579 AC 580
           AC
Sbjct: 328 AC 329



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMN 185

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC G     + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     
Sbjct: 186 DGCSGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLI 244

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C    L H VLLVGY     
Sbjct: 245 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGE 300

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 301 VPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 31/50 (62%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
             C    L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  ACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|227018328|gb|ACP18830.1| cysteine proteinase 1 [Chrysomela tremula]
          Length = 323

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 142/318 (44%), Gaps = 33/318 (10%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHERYGTS-------EFSDRSP 703
           E +  F    G+ Y +  E K RF  F+        H      G S       +FSD + 
Sbjct: 21  ELWADFKKAHGKTYKSLREEKLRFNIFQDTLREIAAHNAKYESGESTYYLAINQFSDITD 80

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE               + V  R  +E M +     G  P++ DWR +    P  +Q  C
Sbjct: 81  EEF---------RAMLMKNVESRPSLEDMEIANLTVGAAPESIDWRTEGAVLPIRNQEDC 131

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQAGL 821
           GSCWAFS    +EGQ AIK+G     S  QLV+C+ +   SGC+G     + +Y    GL
Sbjct: 132 GSCWAFSAVAAVEGQAAIKSGSKTPLSVQQLVDCSTEGGNSGCNGGLMNGAFDYIKANGL 191

Query: 822 ESEKDYPYKNANGEKFKCAYDKSK--VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           ES+  YPY    G    C  DKS   VKL   K       S  +K+ +   GP+SV + +
Sbjct: 192 ESDAKYPY---TGTDDSCKADKSSSLVKLTGYKKVASSEAS--LKEAVGTVGPISVAVYA 246

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
           DL   Y G     N+  C  + L H V  VGYG  +   YW V+NSWG    +EG+ ++ 
Sbjct: 247 DLWRSYGGGIF--NNILCLGFGLDHGVTAVGYGTDNGKKYWPVKNSWGESWGEEGYIRMA 304

Query: 940 RGN-NACGIEQIAGYATI 956
           R   + CGI Q A Y  +
Sbjct: 305 RDTLHNCGINQQASYPIL 322



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 113/222 (50%), Gaps = 12/222 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P++ DWR +    P  +Q DCGSCWAFS    +EGQ AIK+G     S  QLV+C+ 
Sbjct: 108 GAAPESIDWRTEGAVLPIRNQEDCGSCWAFSAVAAVEGQAAIKSGSKTPLSVQQLVDCST 167

Query: 69  Q--CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK--VKLFTGKDFL 124
           +   SGC+G     + +Y    GLES+  YPY    G    C  DKS   VKL   K   
Sbjct: 168 EGGNSGCNGGLMNGAFDYIKANGLESDAKYPY---TGTDDSCKADKSSSLVKLTGYKKVA 224

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
               S  +K+ +   GP+SV + +DL   Y G     N+  C  + L H V  VGYG  +
Sbjct: 225 SSEAS--LKEAVGTVGPISVAVYADLWRSYGGGIF--NNILCLGFGLDHGVTAVGYGTDN 280

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
              YW V+NSWG    +EG+ ++ R   + CGI Q A Y  +
Sbjct: 281 GKKYWPVKNSWGESWGEEGYIRMARDTLHNCGINQQASYPIL 322



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 141/319 (44%), Gaps = 34/319 (10%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHERYGTS-------EFSDRSP 337
           E +  F    G+ Y +  E K RF  F+        H      G S       +FSD + 
Sbjct: 21  ELWADFKKAHGKTYKSLREEKLRFNIFQDTLREIAAHNAKYESGESTYYLAINQFSDITD 80

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE               + V  R  +E M +     G  P++ DWR +    P  +Q  C
Sbjct: 81  EEF---------RAMLMKNVESRPSLEDMEIANLTVGAAPESIDWRTEGAVLPIRNQEDC 131

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQAG 455
           GSCWAFS    +EGQ AIK+G     S  QLV+C+ +  G  GC+G  +    +Y    G
Sbjct: 132 GSCWAFSAVAAVEGQAAIKSGSKTPLSVQQLVDCSTE-GGNSGCNGGLMNGAFDYIKANG 190

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSK--VKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
           LES+  YPY    G    C  DKS   VKL   K     +   ++K+ +   GP+SV + 
Sbjct: 191 LESDAKYPY---TGTDDSCKADKSSSLVKLTGYKKVA--SSEASLKEAVGTVGPISVAVY 245

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           + L   Y G     N+  C  + L H V  VGYG  +   YW  +NSWG    +EG+ ++
Sbjct: 246 ADLWRSYGGGIF--NNILCLGFGLDHGVTAVGYGTDNGKKYWPVKNSWGESWGEEGYIRM 303

Query: 574 ERGN-NACGIEQIAGYATI 591
            R   + CGI Q A Y  +
Sbjct: 304 ARDTLHNCGINQQASYPIL 322


>gi|332326593|gb|AEE42620.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGCGG   + Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCGG-GLMTQAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY +  G+  +C      V       ++    SET M   L K GP+S+G+++  
Sbjct: 210 TEDSYPYVSSXGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIGVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G
Sbjct: 270 FMSYESGVL----TSCAGBXLNHGVLLVGYNXTGEVPYWVIKNSWGEDWGEKGYVRVAMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 139/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCGGGLMTQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY ++ G+  +C      V       ++    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSXGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIGVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYESGVL----TSCAGBXLNHGVLLVGYNXTGEVPYWVIKNSWGEDWGEKGYVRVAMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +E Q+A+   +L   S+ QLV C  + 
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC G     + E+        + +E  YPY ++ G+  +C      V       ++   
Sbjct: 186 SGCGGGLMTQAFEWLLRNMNGTMFTEDSYPYVSSXGDVPECTNSSQLVPGARIDGYVTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +
Sbjct: 246 SSETVMAAWLAKSGPISIGVDASSFMSYESGVL----TSCAGBXLNHGVLLVGYNXTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVAMGVNAC 329



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCAGBXLNHGVLLVGYNXTGEVPYWVIKNSWGEDWGEKGYVRVAMGVNAC 329


>gi|56756955|gb|AAW26649.1| unknown [Schistosoma japonicum]
          Length = 331

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 157/319 (49%), Gaps = 31/319 (9%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGKELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC G F + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGGGFMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSV-LLN 878
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SV ++ 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            D +  Y       ND  C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+
Sbjct: 254 LDSLIMYKSGVFESND--CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKL 311

Query: 939 ERG-NNACGIEQIAGYATI 956
            R  +N CG+   A +  +
Sbjct: 312 RRNKHNMCGVASNASFPLL 330



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR         +Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSKWDWRDHGAVTAVKNQGMCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYGK+  
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVALDSLIMYKSGVFESND--CKYGDINHGVLVVGYGKEHG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 290 KDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 159/321 (49%), Gaps = 34/321 (10%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGKELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGGCDGLEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GCGG   ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGG-GFMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN 513
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG+ 
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 514 S--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           +   LI + +G     ND  C   D+ H VL+VGYGK+    YWL +NSWG +   +G+F
Sbjct: 253 ALDSLIMYKSGV-FESND--CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYF 309

Query: 572 KIERG-NNACGIEQIAGYATI 591
           K+ R  +N CG+   A +  +
Sbjct: 310 KLRRNKHNMCGVASNASFPLL 330



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|30023547|gb|AAO48766.2| cathepsin L-like cysteine proteinase [Tenebrio molitor]
          Length = 337

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 165/325 (50%), Gaps = 32/325 (9%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 701
           + E + AF +   +QY ++ E + R + F ++ H   KH +           G ++++D 
Sbjct: 23  VQEQWGAFKMTHNKQYQSETEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 702 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
              E +    GF    RT   + +  E  + +      +  +P   DWR K    P  DQ
Sbjct: 83  LHHEFVQVLNGFN---RTKSGLRSG-ESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQ 138

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTH- 817
             CGSCW+FS  G LEGQ+  ++GKLV  S+  LV+C+++   +GC+G   + +  Y   
Sbjct: 139 GQCGSCWSFSATGSLEGQHFRQSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKA 198

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYGPLSV 875
             G+++E+ YPYK    E  KC Y K K K  T + ++   +G+E  ++  +   GP+SV
Sbjct: 199 NGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSV 254

Query: 876 LLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPD 932
            +++       Y+G    + D  CS   L H VL+VGYG +D+   YWLV+NSWG    D
Sbjct: 255 AIDASHQSFQLYSGGVYYEPD--CSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGD 312

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+ K+ R  NN CGI   A Y  +
Sbjct: 313 QGYIKMARNRNNNCGIATEASYPLV 337



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 165/326 (50%), Gaps = 33/326 (10%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 335
           + E + AF +   +QY ++ E + R + F ++ H   KH +           G ++++D 
Sbjct: 23  VQEQWGAFKMTHNKQYQSETEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 336 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
              E +    GF    RT   + +  E  + +      +  +P   DWR K    P  DQ
Sbjct: 83  LHHEFVQVLNGFN---RTKSGLRSG-ESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQ 138

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCW+FS  G LEGQ+  ++GKLV  S+  LV+C+++  G  GC+G  ++    Y  
Sbjct: 139 GQCGSCWSFSATGSLEGQHFRQSGKLVSLSEQNLVDCSEKF-GNNGCNGGLMDNAFRYIK 197

Query: 453 -QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSE-TMKKILYKYGPLS 509
              G+++E+ YPY+    E  KC Y K K K  T + ++   +G+E  ++  +   GP+S
Sbjct: 198 ANGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVS 253

Query: 510 VGLNSHLIHF--YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGP 566
           V +++    F  Y+G    + D  CS   L H VL+VGYG +DD   YWL +NSWG    
Sbjct: 254 VAIDASHQSFQLYSGGVYYEPD--CSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWG 311

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           D+G+ K+ R  NN CGI   A Y  +
Sbjct: 312 DQGYIKMARNRNNNCGIATEASYPLV 337



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 15/224 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P   DWR K    P  DQ  CGSCW+FS  G LEGQ+  ++GKLV  S+  LV+C+++ 
Sbjct: 120 LPGQIDWRDKGAVTPVKDQGQCGSCWSFSATGSLEGQHFRQSGKLVSLSEQNLVDCSEKF 179

Query: 71  --SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + +  Y     G+++E+ YPYK    E  KC Y K K K  T + ++   
Sbjct: 180 GNNGCNGGLMDNAFRYIKANGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGYVDIE 235

Query: 127 NGSE-TMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +G+E  ++  +   GP+SV +++       Y+G    + D  CS   L H VL+VGYG +
Sbjct: 236 SGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPD--CSASQLDHGVLVVGYGTE 293

Query: 184 DN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           D+   YWLV+NSWG    D+G+ K+ R  NN CGI   A Y  +
Sbjct: 294 DDGTDYWLVKNSWGKSWGDQGYIKMARNRNNNCGIATEASYPLV 337



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D G+  IE GN       +A    + V               V  +  CS   L H VL+
Sbjct: 228  DRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPDCSASQLDHGVLV 287

Query: 977  VGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG +DD   YWLV+NSWG    D+G+ K+ R  NN CGI   A Y  +
Sbjct: 288  VGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNRNNNCGIATEASYPLV 337


>gi|209731972|gb|ACI66855.1| Cathepsin H precursor [Salmo salar]
          Length = 328

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 145/288 (50%), Gaps = 25/288 (8%)

Query: 674 EIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKML 733
           E K R +Y  +  HK     G ++FSD +  E   +  F  +E   +   A +       
Sbjct: 53  ENKRRIDYHNEGNHKF--TMGLNQFSDLTFAEF--RKSFLLTEP--QNCSATKGS----- 101

Query: 734 MEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 792
             V  +GP P++ DWRKK N      +Q +CGSCW FS  G LE   AI TGKL++ S+ 
Sbjct: 102 -HVSSNGPYPESVDWRKKGNYVTAVKNQGSCGSCWTFSTTGCLESVTAIATGKLLQLSEQ 160

Query: 793 QLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 849
           QLV+CA+  +  GC+G     + EY     G+ +E DYPY   +     C +       F
Sbjct: 161 QLVDCAQAFNNHGCNGGLPSQAFEYIKFNKGIMTEDDYPYTAHDD---TCKFKTDLAAAF 217

Query: 850 TGKDFLHFNGSETMKKI--LYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHA 905
             KD ++    + M  +  + ++ P+S+   + SD +H Y+G      +   +   + HA
Sbjct: 218 V-KDVVNITKYDEMGMVDAVARFNPVSLAYEVTSDFMH-YDGGVYTSKECHNTTDTVNHA 275

Query: 906 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
           VL VGYG++   PYW+V+NSWG     +G+F IERG N CG+   + Y
Sbjct: 276 VLAVGYGEEKGTPYWIVKNSWGSSWGMKGYFFIERGKNMCGLAACSSY 323



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 13/227 (5%)

Query: 4   EVEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
            V  +GP P++ DWRKK N      +Q  CGSCW FS  G LE   AI TGKL++ S+ Q
Sbjct: 102 HVSSNGPYPESVDWRKKGNYVTAVKNQGSCGSCWTFSTTGCLESVTAIATGKLLQLSEQQ 161

Query: 63  LVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
           LV+CA+  +  GC+G     + EY     G+ +E DYPY   +     C +       F 
Sbjct: 162 LVDCAQAFNNHGCNGGLPSQAFEYIKFNKGIMTEDDYPYTAHDD---TCKFKTDLAAAFV 218

Query: 120 GKDFLHFNGSETMKKI--LYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAV 175
            KD ++    + M  +  + ++ P+S+   + SD +H Y+G      +   +   + HAV
Sbjct: 219 -KDVVNITKYDEMGMVDAVARFNPVSLAYEVTSDFMH-YDGGVYTSKECHNTTDTVNHAV 276

Query: 176 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           L VGYG++   PYW+V+NSWG     +G+F IERG N CG+   + Y
Sbjct: 277 LAVGYGEEKGTPYWIVKNSWGSSWGMKGYFFIERGKNMCGLAACSSY 323



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 140/288 (48%), Gaps = 24/288 (8%)

Query: 308 EIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKML 367
           E K R +Y  +  HK     G ++FSD +  E   +  F  +E   +   A +       
Sbjct: 53  ENKRRIDYHNEGNHKF--TMGLNQFSDLTFAEF--RKSFLLTEP--QNCSATKGS----- 101

Query: 368 MEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 426
             V  +GP P++ DWRKK N      +Q +CGSCW FS  G LE   AI TGKL++ S+ 
Sbjct: 102 -HVSSNGPYPESVDWRKKGNYVTAVKNQGSCGSCWTFSTTGCLESVTAIATGKLLQLSEQ 160

Query: 427 QLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF 484
           QLV+CA+  +  G   GL  Q  EY     G+ +E DYPY   +     C +       F
Sbjct: 161 QLVDCAQAFNNHGCNGGLPSQAFEYIKFNKGIMTEDDYPYTAHDD---TCKFKTDLAAAF 217

Query: 485 TGKDFLYFNGSETMKKI--LYKYGPLSVG--LNSHLIHFYNGTPIRKNDETCSPYDLGHA 540
             KD +     + M  +  + ++ P+S+   + S  +H+  G    K     +   + HA
Sbjct: 218 V-KDVVNITKYDEMGMVDAVARFNPVSLAYEVTSDFMHYDGGVYTSKECHNTTD-TVNHA 275

Query: 541 VLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
           VL VGYG++   PYW+ +NSWG     +G+F IERG N CG+   + Y
Sbjct: 276 VLAVGYGEEKGTPYWIVKNSWGSSWGMKGYFFIERGKNMCGLAACSSY 323



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 35/52 (67%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            + HAVL VGYG++   PYW+V+NSWG     +G+F IERG N CG+   + Y
Sbjct: 272  VNHAVLAVGYGEEKGTPYWIVKNSWGSSWGMKGYFFIERGKNMCGLAACSSY 323


>gi|224069140|ref|XP_002326284.1| predicted protein [Populus trichocarpa]
 gi|118482340|gb|ABK93094.1| unknown [Populus trichocarpa]
 gi|222833477|gb|EEE71954.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 167/371 (45%), Gaps = 40/371 (10%)

Query: 605 IMLIQAVFLLCGVASCLC------LPSLTDRITDQVVARVDTLAIEGSLTFDNENILETF 658
           +++   +FLLC VA+         +  ++DR+ D   + V  L               +F
Sbjct: 7   LVVSSILFLLCCVAAGSSFDESNPIKLVSDRLHDFESSFVKVLG--------QSRRALSF 58

Query: 659 KAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILCKT 710
             F  + G++Y  + E+K RF  F +        +KK   Y  G ++F+D + +E     
Sbjct: 59  ARFAHRHGKRYETEGEMKLRFAIFSESLDLIRSTNKKGLPYTLGLNQFADWTWQEFQ--- 115

Query: 711 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 770
             K+     +   A      K+      +  +P+  DWR++ +  P  +Q  CGSCW FS
Sbjct: 116 --KYRLGAAQNCSATTRGNHKL-----TNALLPETKDWREEGIVSPVKNQGHCGSCWTFS 168

Query: 771 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDY 827
             G LE  Y    GK +  S+ QLV+CA+  +  GC+G     + EY     GL++E+ Y
Sbjct: 169 TTGALEAAYHQAFGKGISLSEQQLVDCARAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAY 228

Query: 828 PYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNS-DLIHDY 885
           PY    G+   C +    V +   +   +     + +K  +    P+SV          Y
Sbjct: 229 PY---TGKDDACKFSSENVGVRVVESVNITLGAEDELKHAVAFVRPVSVAFEVVGSFRLY 285

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 945
                  +    +P D+ HAVL VGYG ++ IPYWL++NSWG    D G+FK+E G N C
Sbjct: 286 KEGVYTTSTCGSTPMDVNHAVLAVGYGVENGIPYWLIKNSWGEDWGDNGYFKMEMGKNMC 345

Query: 946 GIEQIAGYATI 956
           GI   A Y  +
Sbjct: 346 GIATCASYPVV 356



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 166/371 (44%), Gaps = 39/371 (10%)

Query: 239 IMLIQAVFLLCGVASCLC------LPSLTDRITDQVVARVDTLAIEGSLTFDNENILETF 292
           +++   +FLLC VA+         +  ++DR+ D   + V  L               +F
Sbjct: 7   LVVSSILFLLCCVAAGSSFDESNPIKLVSDRLHDFESSFVKVLG--------QSRRALSF 58

Query: 293 KAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILCKT 344
             F  + G++Y  + E+K RF  F +        +KK   Y  G ++F+D + +E     
Sbjct: 59  ARFAHRHGKRYETEGEMKLRFAIFSESLDLIRSTNKKGLPYTLGLNQFADWTWQEFQ--- 115

Query: 345 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 404
             K+     +   A      K+      +  +P+  DWR++ +  P  +Q  CGSCW FS
Sbjct: 116 --KYRLGAAQNCSATTRGNHKL-----TNALLPETKDWREEGIVSPVKNQGHCGSCWTFS 168

Query: 405 IAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYTH-QAGLESEKDY 462
             G LE  Y    GK +  S+ QLV+CA+  +  G   GL  Q  EY     GL++E+ Y
Sbjct: 169 TTGALEAAYHQAFGKGISLSEQQLVDCARAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAY 228

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNS-HLIHFY 520
           PY    G+   C +    V +   +      G+E  +K  +    P+SV          Y
Sbjct: 229 PY---TGKDDACKFSSENVGVRVVESVNITLGAEDELKHAVAFVRPVSVAFEVVGSFRLY 285

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNAC 580
                  +    +P D+ HAVL VGYG ++ IPYWL +NSWG    D G+FK+E G N C
Sbjct: 286 KEGVYTTSTCGSTPMDVNHAVLAVGYGVENGIPYWLIKNSWGEDWGDNGYFKMEMGKNMC 345

Query: 581 GIEQIAGYATI 591
           GI   A Y  +
Sbjct: 346 GIATCASYPVV 356



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 110/220 (50%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR++ +  P  +Q  CGSCW FS  G LE  Y    GK +  S+ QLV+CA+  
Sbjct: 140 LPETKDWREEGIVSPVKNQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCARAF 199

Query: 71  S--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
           +  GC+G     + EY     GL++E+ YPY    G+   C +    V +   +   +  
Sbjct: 200 NNFGCNGGLPSQAFEYIKFNGGLDTEEAYPY---TGKDDACKFSSENVGVRVVESVNITL 256

Query: 127 NGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              + +K  +    P+SV          Y       +    +P D+ HAVL VGYG ++ 
Sbjct: 257 GAEDELKHAVAFVRPVSVAFEVVGSFRLYKEGVYTTSTCGSTPMDVNHAVLAVGYGVENG 316

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           IPYWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 317 IPYWLIKNSWGEDWGDNGYFKMEMGKNMCGIATCASYPVV 356


>gi|417409774|gb|JAA51378.1| Putative cathepsin k, partial [Desmodus rotundus]
          Length = 331

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G VPD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 114 EGKVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 173

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   +  Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 174 SENDGCGGGYMTNAFHYVQKNQGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYKEIP 230

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     D+ C+  +L HAVL VGYG Q  
Sbjct: 231 EGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDKNCNSDNLNHAVLAVGYGIQKR 290

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 291 KKHWIIKNSWGESWGNKGYILMARNKNNACGIANLASFPKM 331



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           +G VPD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 114 EGKVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 173

Query: 799 KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 856
            +  GC G +   +  Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 174 SENDGCGGGYMTNAFHYVQKNQGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYKEIP 230

Query: 857 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               + +K+ + + GP+SV +++ L      +     D+ C+  +L HAVL VGYG Q  
Sbjct: 231 EGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDKNCNSDNLNHAVLAVGYGIQKR 290

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 291 KKHWIIKNSWGESWGNKGYILMARNKNNACGIANLASFPKM 331



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 119/222 (53%), Gaps = 7/222 (3%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           +G VPD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 114 EGKVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 173

Query: 433 KQCSGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFL 490
            +  GCGG   +     Y  +  G++SE  YPY    G+   C Y+ + K     G   +
Sbjct: 174 SENDGCGG-GYMTNAFHYVQKNQGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYKEI 229

Query: 491 YFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                + +K+ + + GP+SV +++ L  F   +     D+ C+  +L HAVL VGYG Q 
Sbjct: 230 PEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDKNCNSDNLNHAVLAVGYGIQK 289

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
              +W+ +NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 290 RKKHWIIKNSWGESWGNKGYILMARNKNNACGIANLASFPKM 331



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            D+ C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 268  DKNCNSDNLNHAVLAVGYGIQKRKKHWIIKNSWGESWGNKGYILMARNKNNACGIANLAS 327

Query: 1021 YATI 1024
            +  +
Sbjct: 328  FPKM 331


>gi|401430350|ref|XP_003886559.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|356491516|emb|CBZ40966.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 503

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 140/305 (45%), Gaps = 22/305 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 98  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 154

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 155 -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 213

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C     GCDG     + ++  Q     L +E  
Sbjct: 214 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLYTEDS 273

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+ + S++ +    D     GS  + M   L K GP+++ L++     
Sbjct: 274 YPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 332

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 333 YKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 388

Query: 945 CGIEQ 949
           C + +
Sbjct: 389 CLLSE 393



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 141/306 (46%), Gaps = 23/306 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 98  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 154

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 155 -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 213

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C     GC G   + Q  ++  Q     L +E 
Sbjct: 214 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDG-GLMLQAFDWLLQNTNGHLYTED 272

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+ + S++ +    D     GS  + M   L K GP+++ L++    
Sbjct: 273 SYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 331

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 332 SYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 387

Query: 579 ACGIEQ 584
           AC + +
Sbjct: 388 ACLLSE 393



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 10/213 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 186 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMN 245

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GCDG     + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     
Sbjct: 246 DGCDGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLI 304

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C    L H VLLVGY     
Sbjct: 305 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGE 360

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           +PYW+++NSWG    ++G+ ++  G NAC + +
Sbjct: 361 VPYWVIKNSWGGDWGEQGYVRVVMGVNACLLSE 393


>gi|3850787|emb|CAA05360.1| cathepsin S [Mus musculus]
          Length = 330

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 133/271 (49%), Gaps = 21/271 (7%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 74  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 124

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCGGCDG 443
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GCGG   
Sbjct: 125 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 184

Query: 444 LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKI 501
            E         G+E++  YPY+       KC Y+ SK +  T   +  L F   + +K+ 
Sbjct: 185 TEAFQYIIDNGGIEADASYPYK---AMDEKCHYN-SKNRAATCSRYIQLPFGDEDALKEA 240

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
           +   GP+SVG+++    F+       +D +C+  ++ H VL+VGYG  D   YWL +NSW
Sbjct: 241 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 299

Query: 562 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 300 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 330



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 135/271 (49%), Gaps = 22/271 (8%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 74  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 124

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFF 809
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GC G + 
Sbjct: 125 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 184

Query: 810 EPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGSETMKKI 866
             + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++   F   + +K+ 
Sbjct: 185 TEAFQYIIDNGGIEADASYPYKAMDE---KCHYN-SKNRAATCSRYIQLPFGDEDALKEA 240

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926
           +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  D   YWLV+NSW
Sbjct: 241 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 299

Query: 927 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 300 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 330



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR+K        Q  CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ + 
Sbjct: 113 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 172

Query: 70  ---CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++ 
Sbjct: 173 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKAMDE---KCHYN-SKNRAATCSRYIQ 228

Query: 126 --FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
             F   + +K+ +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  
Sbjct: 229 LPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTL 287

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 288 DGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 330



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V +D +C+  ++ H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI  
Sbjct: 265  VYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIAS 323

Query: 1018 IAGYATI 1024
               Y  I
Sbjct: 324  YCSYPEI 330


>gi|401758202|gb|AFQ01136.1| cathepsin O2-like protease [Chilo suppressalis]
          Length = 368

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 169/357 (47%), Gaps = 49/357 (13%)

Query: 640 TLAIEGSLTFDNENILETFKAFIVKRGRQYAND-EEIKERFEYF-------------KQD 685
            + I  S +   E +   F  +I K  + Y N+ EE + RF++F              + 
Sbjct: 22  VVPISYSASTSKEQLKPIFDQYIEKYNKSYKNNPEEYETRFQHFLVSMSEIDRLNSESRG 81

Query: 686 GHKKHERYGTSEFSDRSP---------EEILCKTGF-------KWSERTYERIVADREKV 729
             +   RYG ++ SD SP         +E L K+         K ++R Y  +    E+ 
Sbjct: 82  PEQYRARYGPTKLSDMSPTEYKDLHLSDEKLTKSPATYDRSWRKHNQRDYYHVQDVNERK 141

Query: 730 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 789
           E ++ +  K   +P   DWR K   G   +Q  CG+CWAFS  G +E   AI TGKL   
Sbjct: 142 ENLIRK--KRASLPMLVDWRVKGAVGAVRNQGLCGACWAFSTVGTMESMAAINTGKLPAL 199

Query: 790 SKSQLVECAKQ----CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDKS 844
           S  ++++CA+     CSG D C     +  T+   +E EKDYP +  NG  K K      
Sbjct: 200 SVQEVIDCARLGNQGCSGGDICLLLDWLMITNTP-VEVEKDYPLQLTNGVCKAKKNTTGV 258

Query: 845 KVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS--PYD 901
           +V  FT  DF+   G+E  + + L  +GP++V +N+    +Y G  I+ +   CS    D
Sbjct: 259 RVTSFTCDDFV---GTEQKIIEALALHGPVAVAVNALTWQNYLGGVIQYH---CSGDAMD 312

Query: 902 LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
           L HAV LVGY    ++PY++ +NSWG      G+  +  G+N CG+      ATIDV
Sbjct: 313 LNHAVQLVGYDLTADVPYYIAKNSWGSDFGLNGYIHLAIGSNICGLAN--EVATIDV 367



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 168/358 (46%), Gaps = 50/358 (13%)

Query: 274 TLAIEGSLTFDNENILETFKAFIVKRGRQYAND-EEIKERFEYF-------------KQD 319
            + I  S +   E +   F  +I K  + Y N+ EE + RF++F              + 
Sbjct: 22  VVPISYSASTSKEQLKPIFDQYIEKYNKSYKNNPEEYETRFQHFLVSMSEIDRLNSESRG 81

Query: 320 GHKKHERYGTSEFSDRSP---------EEILCKTGF-------KWSERTYERIVADREKV 363
             +   RYG ++ SD SP         +E L K+         K ++R Y  +    E+ 
Sbjct: 82  PEQYRARYGPTKLSDMSPTEYKDLHLSDEKLTKSPATYDRSWRKHNQRDYYHVQDVNERK 141

Query: 364 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 423
           E ++ +  K   +P   DWR K   G   +Q  CG+CWAFS  G +E   AI TGKL   
Sbjct: 142 ENLIRK--KRASLPMLVDWRVKGAVGAVRNQGLCGACWAFSTVGTMESMAAINTGKLPAL 199

Query: 424 SKSQLVECAKQ----CSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGE-KFKCAYDK 478
           S  ++++CA+     CSG   C  L+  +       +E EKDYP +  NG  K K     
Sbjct: 200 SVQEVIDCARLGNQGCSGGDICLLLDWLM--ITNTPVEVEKDYPLQLTNGVCKAKKNTTG 257

Query: 479 SKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCS--PY 535
            +V  FT  DF+   G+E  + + L  +GP++V +N+     Y G  I+ +   CS    
Sbjct: 258 VRVTSFTCDDFV---GTEQKIIEALALHGPVAVAVNALTWQNYLGGVIQYH---CSGDAM 311

Query: 536 DLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 593
           DL HAV LVGY    D+PY++A+NSWG      G+  +  G+N CG+      ATIDV
Sbjct: 312 DLNHAVQLVGYDLTADVPYYIAKNSWGSDFGLNGYIHLAIGSNICGLAN--EVATIDV 367



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 120/230 (52%), Gaps = 17/230 (7%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           +K   +P   DWR K   G   +Q  CG+CWAFS  G +E   AI TGKL   S  ++++
Sbjct: 147 KKRASLPMLVDWRVKGAVGAVRNQGLCGACWAFSTVGTMESMAAINTGKLPALSVQEVID 206

Query: 66  CAKQ----CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTG 120
           CA+     CSG D C     +  T+   +E EKDYP +  NG  K K      +V  FT 
Sbjct: 207 CARLGNQGCSGGDICLLLDWLMITNTP-VEVEKDYPLQLTNGVCKAKKNTTGVRVTSFTC 265

Query: 121 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS--PYDLGHAVLL 177
            DF+   G+E  + + L  +GP++V +N+    +Y G  I+ +   CS    DL HAV L
Sbjct: 266 DDFV---GTEQKIIEALALHGPVAVAVNALTWQNYLGGVIQYH---CSGDAMDLNHAVQL 319

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
           VGY    ++PY++ +NSWG      G+  +  G+N CG+      ATIDV
Sbjct: 320 VGYDLTADVPYYIAKNSWGSDFGLNGYIHLAIGSNICGLAN--EVATIDV 367



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 1026
            DL HAV LVGY    D+PY++ +NSWG      G+  +  G+N CG+      ATIDV
Sbjct: 312  DLNHAVQLVGYDLTADVPYYIAKNSWGSDFGLNGYIHLAIGSNICGLAN--EVATIDV 367


>gi|41323856|gb|AAS00027.1| cathepsin L-like cysteine proteinase [Taenia solium]
          Length = 339

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 162/334 (48%), Gaps = 28/334 (8%)

Query: 640 TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER------FEYFKQDGHKKH--- 690
            + +E S       +   +  + ++ GR Y+  EE   R        Y K    + +   
Sbjct: 17  AVVVETSALLTERELSRQWAGWKLQHGRVYSGKEEAYRRGVFARNLLYIKGQNRRFNAGL 76

Query: 691 ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 748
           E Y  G ++F+D    E   +       R   R+   R ++ K L        +PD  DW
Sbjct: 77  ESYSTGLNQFADLESSEFSERF---LGTRPESRVAGRRGRIWKALASA---AGLPDTVDW 130

Query: 749 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDG 806
           R KN+     +Q  CGSCWAFS  G LEG +A KTGKL+  S+ QLV+C+ +    GC+G
Sbjct: 131 RDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLKNGNDGCNG 190

Query: 807 CFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MK 864
            +   + +Y  +  +E E  YPY+  +G    C Y++S + + T  D      G+ET + 
Sbjct: 191 GYMSYAFKYLEEHFIEPESAYPYRATDG---PCRYNES-LGVGTVTDIGDIPEGNETALM 246

Query: 865 KILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 923
           + +   GP+S+ ++ S L   +    I K+   CS   L H VL +GYGKQD  PYWLV+
Sbjct: 247 EAVATVGPISIAIDASSLGFMFYRHGIYKS-HWCSSKFLNHGVLAIGYGKQDGKPYWLVK 305

Query: 924 NSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 306 NSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 339



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 159/334 (47%), Gaps = 27/334 (8%)

Query: 274 TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER------FEYFKQDGHKKH--- 324
            + +E S       +   +  + ++ GR Y+  EE   R        Y K    + +   
Sbjct: 17  AVVVETSALLTERELSRQWAGWKLQHGRVYSGKEEAYRRGVFARNLLYIKGQNRRFNAGL 76

Query: 325 ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 382
           E Y  G ++F+D    E   +       R   R+   R ++ K L        +PD  DW
Sbjct: 77  ESYSTGLNQFADLESSEFSERF---LGTRPESRVAGRRGRIWKALASA---AGLPDTVDW 130

Query: 383 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCD 442
           R KN+     +Q  CGSCWAFS  G LEG +A KTGKL+  S+ QLV+C+ + +G  GC+
Sbjct: 131 RDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLK-NGNDGCN 189

Query: 443 G--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSET-M 498
           G  +    +Y  +  +E E  YPYR  +G    C Y++S + + T  D      G+ET +
Sbjct: 190 GGYMSYAFKYLEEHFIEPESAYPYRATDG---PCRYNES-LGVGTVTDIGDIPEGNETAL 245

Query: 499 KKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLAR 558
            + +   GP+S+ +++  + F            CS   L H VL +GYGKQD  PYWL +
Sbjct: 246 MEAVATVGPISIAIDASSLGFMFYRHGIYKSHWCSSKFLNHGVLAIGYGKQDGKPYWLVK 305

Query: 559 NSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 306 NSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 339



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 125/221 (56%), Gaps = 11/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD  DWR KN+     +Q +CGSCWAFS  G LEG +A KTGKL+  S+ QLV+C+ + 
Sbjct: 124 LPDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLKN 183

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-N 127
              GC+G +   + +Y  +  +E E  YPY+  +G    C Y++S + + T  D      
Sbjct: 184 GNDGCNGGYMSYAFKYLEEHFIEPESAYPYRATDG---PCRYNES-LGVGTVTDIGDIPE 239

Query: 128 GSET-MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           G+ET + + +   GP+S+ ++ S L   +    I K+   CS   L H VL +GYGKQD 
Sbjct: 240 GNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKS-HWCSSKFLNHGVLAIGYGKQDG 298

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            PYWLV+NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 299 KPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 339



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            CS   L H VL +GYGKQD  PYWLV+NSWG     +G+  + +  +N CG+  +A +  
Sbjct: 279  CSSKFLNHGVLAIGYGKQDGKPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPY 338

Query: 1024 I 1024
            +
Sbjct: 339  V 339


>gi|390608645|ref|NP_001254624.1| cathepsin S isoform 1 preproprotein [Mus musculus]
 gi|74214026|dbj|BAE29430.1| unnamed protein product [Mus musculus]
          Length = 343

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 133/271 (49%), Gaps = 21/271 (7%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 87  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 137

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCGGCDG 443
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GCGG   
Sbjct: 138 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 197

Query: 444 LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKI 501
            E         G+E++  YPY+       KC Y+ SK +  T   +  L F   + +K+ 
Sbjct: 198 TEAFQYIIDNGGIEADASYPYK---ATDEKCHYN-SKNRAATCSRYIQLPFGDEDALKEA 253

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
           +   GP+SVG+++    F+       +D +C+  ++ H VL+VGYG  D   YWL +NSW
Sbjct: 254 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 312

Query: 562 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 313 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 343



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 135/271 (49%), Gaps = 22/271 (8%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 87  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 137

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFF 809
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GC G + 
Sbjct: 138 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 197

Query: 810 EPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGSETMKKI 866
             + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++   F   + +K+ 
Sbjct: 198 TEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SKNRAATCSRYIQLPFGDEDALKEA 253

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926
           +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  D   YWLV+NSW
Sbjct: 254 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 312

Query: 927 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 313 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 343



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR+K        Q  CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ + 
Sbjct: 126 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 185

Query: 70  ---CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++ 
Sbjct: 186 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SKNRAATCSRYIQ 241

Query: 126 --FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
             F   + +K+ +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  
Sbjct: 242 LPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTL 300

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 301 DGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 343



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V +D +C+  ++ H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI  
Sbjct: 278  VYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIAS 336

Query: 1018 IAGYATI 1024
               Y  I
Sbjct: 337  YCSYPEI 343


>gi|392306967|ref|NP_067256.3| cathepsin S isoform 2 preproprotein [Mus musculus]
 gi|26390492|dbj|BAC25906.1| unnamed protein product [Mus musculus]
 gi|148706872|gb|EDL38819.1| cathepsin S [Mus musculus]
          Length = 342

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 133/271 (49%), Gaps = 21/271 (7%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 86  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 136

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCGGCDG 443
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GCGG   
Sbjct: 137 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 196

Query: 444 LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKI 501
            E         G+E++  YPY+       KC Y+ SK +  T   +  L F   + +K+ 
Sbjct: 197 TEAFQYIIDNGGIEADASYPYK---ATDEKCHYN-SKNRAATCSRYIQLPFGDEDALKEA 252

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
           +   GP+SVG+++    F+       +D +C+  ++ H VL+VGYG  D   YWL +NSW
Sbjct: 253 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 311

Query: 562 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 312 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 342



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 135/271 (49%), Gaps = 22/271 (8%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 86  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 136

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFF 809
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GC G + 
Sbjct: 137 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 196

Query: 810 EPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGSETMKKI 866
             + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++   F   + +K+ 
Sbjct: 197 TEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SKNRAATCSRYIQLPFGDEDALKEA 252

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926
           +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  D   YWLV+NSW
Sbjct: 253 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 311

Query: 927 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 312 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 342



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR+K        Q  CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ + 
Sbjct: 125 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 184

Query: 70  ---CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++ 
Sbjct: 185 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SKNRAATCSRYIQ 240

Query: 126 --FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
             F   + +K+ +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  
Sbjct: 241 LPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTL 299

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 300 DGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 342



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V +D +C+  ++ H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI  
Sbjct: 277  VYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIAS 335

Query: 1018 IAGYATI 1024
               Y  I
Sbjct: 336  YCSYPEI 342


>gi|401430108|ref|XP_003879535.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|356491914|emb|CBZ40911.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 359

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 138/301 (45%), Gaps = 22/301 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
               +         A R   +           VPDA DWR+K    P  DQ  CGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGECGSCWAF 153

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C     GCDG     + ++  Q     L +E  
Sbjct: 154 SSVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLYTEDS 213

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+ + SK+ +    D     GS  + M   L K GP+++ L++     
Sbjct: 214 YPYVSGNGYLPECS-NSSKLVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 272

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C    + HAVLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 273 YKSGVL----TACIGKQVNHAVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 328

Query: 945 C 945
           C
Sbjct: 329 C 329



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 139/302 (46%), Gaps = 23/302 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
               +         A R   +           VPDA DWR+K    P  DQ  CGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGECGSCWAF 153

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C     GC G   L Q  ++  Q     L +E 
Sbjct: 154 SSVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLML-QAFDWLLQNTNGHLYTED 212

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+ + SK+ +    D     GS  + M   L K GP+++ L++    
Sbjct: 213 SYPYVSGNGYLPECS-NSSKLVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 271

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C    + HAVLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 272 SYKSGVL----TACIGKQVNHAVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 327

Query: 579 AC 580
           AC
Sbjct: 328 AC 329



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 110/209 (52%), Gaps = 10/209 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ +CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKDQGECGSCWAFSSVGNIEGQWYLAGHELVSLSEQQLVSCDDMN 185

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GCDG     + ++  Q     L +E  YPY + NG   +C+ + SK+ +    D     
Sbjct: 186 DGCDGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYLPECS-NSSKLVVGAQIDGHVLI 244

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C    + HAVLLVGY     
Sbjct: 245 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQVNHAVLLVGYDMTGE 300

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 301 VPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|348531519|ref|XP_003453256.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 141/277 (50%), Gaps = 19/277 (6%)

Query: 323 KHERYGTSEFSDRSPEEI--LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAW 380
           K  R G + F+D   EE   L   G      T+   + +R       + + +   +PD  
Sbjct: 69  KSYRLGMTHFADMDNEEYKQLVSQG---CLHTFNASLPERGSA---FLGLPEGTALPDTV 122

Query: 381 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG 440
           DWR K       DQ  CGSCWAFS  G+LEGQ+  KTGKLV  S+ QL++C+    G  G
Sbjct: 123 DWRDKGYVTEVKDQKQCGSCWAFSTTGVLEGQHFRKTGKLVSLSEQQLMDCS-HSFGNNG 181

Query: 441 CDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET 497
           C+G  +++ ++Y     G+++E  YPY+   G++ +   D    K  TG   +  +  ET
Sbjct: 182 CNGGSVKRALQYIQANGGIDTETSYPYK-AKGQRCRYKPDGIGAKC-TGYVHVKPSNEET 239

Query: 498 MKKILYKYGPLSVGLNS--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
           +KK +   GP+SVG+++  H   FY       +D  CS   L H  L VGYG ++   YW
Sbjct: 240 LKKAVATLGPISVGIDASRHSFQFYQSGVY--DDPDCSKTVLDHGALAVGYGTENGHDYW 297

Query: 556 LARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           L +NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 298 LIKNSWGLRWGDKGYIKMSRNKSNQCGIASEASYPLV 334



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 138/274 (50%), Gaps = 14/274 (5%)

Query: 689 KHERYGTSEFSDRSPEEI--LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAW 746
           K  R G + F+D   EE   L   G      T+   + +R       + + +   +PD  
Sbjct: 69  KSYRLGMTHFADMDNEEYKQLVSQG---CLHTFNASLPERGSA---FLGLPEGTALPDTV 122

Query: 747 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGC 804
           DWR K       DQ  CGSCWAFS  G+LEGQ+  KTGKLV  S+ QL++C+     +GC
Sbjct: 123 DWRDKGYVTEVKDQKQCGSCWAFSTTGVLEGQHFRKTGKLVSLSEQQLMDCSHSFGNNGC 182

Query: 805 DGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 863
           +G   + +++Y     G+++E  YPYK A G++ +   D    K  TG   +  +  ET+
Sbjct: 183 NGGSVKRALQYIQANGGIDTETSYPYK-AKGQRCRYKPDGIGAKC-TGYVHVKPSNEETL 240

Query: 864 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 923
           KK +   GP+SV +++             +D  CS   L H  L VGYG ++   YWL++
Sbjct: 241 KKAVATLGPISVGIDASRHSFQFYQSGVYDDPDCSKTVLDHGALAVGYGTENGHDYWLIK 300

Query: 924 NSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 301 NSWGLRWGDKGYIKMSRNKSNQCGIASEASYPLV 334



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 119/219 (54%), Gaps = 6/219 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD  DWR K       DQ  CGSCWAFS  G+LEGQ+  KTGKLV  S+ QL++C+   
Sbjct: 118 LPDTVDWRDKGYVTEVKDQKQCGSCWAFSTTGVLEGQHFRKTGKLVSLSEQQLMDCSHSF 177

Query: 71  --SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GC+G   + +++Y     G+++E  YPYK A G++ +   D    K  TG   +  +
Sbjct: 178 GNNGCNGGSVKRALQYIQANGGIDTETSYPYK-AKGQRCRYKPDGIGAKC-TGYVHVKPS 235

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             ET+KK +   GP+SV +++             +D  CS   L H  L VGYG ++   
Sbjct: 236 NEETLKKAVATLGPISVGIDASRHSFQFYQSGVYDDPDCSKTVLDHGALAVGYGTENGHD 295

Query: 188 YWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           YWL++NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 296 YWLIKNSWGLRWGDKGYIKMSRNKSNQCGIASEASYPLV 334



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V +D  CS   L H  L VGYG ++   YWL++NSWG    D+G+ K+ R  +N CGI  
Sbjct: 268  VYDDPDCSKTVLDHGALAVGYGTENGHDYWLIKNSWGLRWGDKGYIKMSRNKSNQCGIAS 327

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 328  EASYPLV 334


>gi|341940310|sp|O70370.2|CATS_MOUSE RecName: Full=Cathepsin S; Flags: Precursor
          Length = 340

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 133/271 (49%), Gaps = 21/271 (7%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCGGCDG 443
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GCGG   
Sbjct: 135 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 194

Query: 444 LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKI 501
            E         G+E++  YPY+       KC Y+ SK +  T   +  L F   + +K+ 
Sbjct: 195 TEAFQYIIDNGGIEADASYPYK---ATDEKCHYN-SKNRAATCSRYIQLPFGDEDALKEA 250

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
           +   GP+SVG+++    F+       +D +C+  ++ H VL+VGYG  D   YWL +NSW
Sbjct: 251 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 309

Query: 562 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 310 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 135/271 (49%), Gaps = 22/271 (8%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFF 809
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GC G + 
Sbjct: 135 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 194

Query: 810 EPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGSETMKKI 866
             + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++   F   + +K+ 
Sbjct: 195 TEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SKNRAATCSRYIQLPFGDEDALKEA 250

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926
           +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  D   YWLV+NSW
Sbjct: 251 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 309

Query: 927 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 310 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR+K        Q  CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ + 
Sbjct: 123 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 182

Query: 70  ---CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++ 
Sbjct: 183 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SKNRAATCSRYIQ 238

Query: 126 --FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
             F   + +K+ +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  
Sbjct: 239 LPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTL 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 298 DGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V +D +C+  ++ H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI  
Sbjct: 275  VYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIAS 333

Query: 1018 IAGYATI 1024
               Y  I
Sbjct: 334  YCSYPEI 340


>gi|149751227|ref|XP_001490649.1| PREDICTED: cathepsin K-like [Equus caballus]
          Length = 329

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSHTRSNDTLYIPDWEGRAPDSIDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPQGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 245 VSVAIDASLTSFQFYSRGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYILMARNKNNACGIANMASFPKM 329



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL VGYG Q  
Sbjct: 229 QGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVYYDENCNSDNLNHAVLAVGYGIQKG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANMASFPKM 329



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSHTRSNDTLYIPDWEGRAPDSIDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPQGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 244 PVSVAIDASLTSFQFYSRGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYILMARNKNNACGIANMASFPKM 329



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANMAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|17062058|gb|AAL34984.1|AF320565_1 cathepsine L-like cysteine protease [Rhodnius prolixus]
          Length = 316

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 150/312 (48%), Gaps = 24/312 (7%)

Query: 294 AFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTG------FK 347
           AF    G+ Y N  E   R + F  +  K  E     E  + S +  +   G      FK
Sbjct: 15  AFKAMHGKNYRNQFEEIFRMKVFIDNKKKIDEHNAKYELGEASYKMKMNHLGDLMVHEFK 74

Query: 348 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 407
                +++   + E+  K+   V  +  +P + DWR++    P  DQ  CGSCW+FS  G
Sbjct: 75  ALMNGFKK-TPNAERNGKIY--VPSNENLPKSVDWRQRGAVTPVKDQGHCGSCWSFSATG 131

Query: 408 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPY 464
            LEGQ  +KTG+LV  S+  LV+C+K   G  GC+G  + Q  +Y     G+++E  YPY
Sbjct: 132 SLEGQLFLKTGRLVSLSEQNLVDCSK-TYGNSGCEGGLMNQAFQYVRDNKGIDTEASYPY 190

Query: 465 RNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYK----YGPLSVGLNSHLIHFY 520
                 +  C + + KV    G D  Y +  E  +K L       GP+SV +++    F 
Sbjct: 191 E---ARENNCRFKEDKV---GGTDKGYVDILEASEKDLQSAVATVGPISVRIDASHESFQ 244

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN-NA 579
             +     ++ CSP  L H VL VGYG ++   YWL +NSWGP   + G+ KI R + N 
Sbjct: 245 FYSEGVYKEQYCSPSQLDHGVLTVGYGTENGQDYWLVKNSWGPSWGESGYIKIARNHKNH 304

Query: 580 CGIEQIAGYATI 591
           CGI  +A Y  +
Sbjct: 305 CGIASMASYPVV 316



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 153/310 (49%), Gaps = 21/310 (6%)

Query: 660 AFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTG------FK 713
           AF    G+ Y N  E   R + F  +  K  E     E  + S +  +   G      FK
Sbjct: 15  AFKAMHGKNYRNQFEEIFRMKVFIDNKKKIDEHNAKYELGEASYKMKMNHLGDLMVHEFK 74

Query: 714 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 773
                +++   + E+  K+   V  +  +P + DWR++    P  DQ  CGSCW+FS  G
Sbjct: 75  ALMNGFKK-TPNAERNGKIY--VPSNENLPKSVDWRQRGAVTPVKDQGHCGSCWSFSATG 131

Query: 774 MLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYK 830
            LEGQ  +KTG+LV  S+  LV+C+K    SGC+G     + +Y     G+++E  YPY+
Sbjct: 132 SLEGQLFLKTGRLVSLSEQNLVDCSKTYGNSGCEGGLMNQAFQYVRDNKGIDTEASYPYE 191

Query: 831 NANGEKFKCAYDKSKVKLFTGKDFLH-FNGSET-MKKILYKYGPLSVLLN-SDLIHDYNG 887
                +  C + + KV   T K ++     SE  ++  +   GP+SV ++ S     +  
Sbjct: 192 ---ARENNCRFKEDKVG-GTDKGYVDILEASEKDLQSAVATVGPISVRIDASHESFQFYS 247

Query: 888 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACG 946
             + K ++ CSP  L H VL VGYG ++   YWLV+NSWGP   + G+ KI R + N CG
Sbjct: 248 EGVYK-EQYCSPSQLDHGVLTVGYGTENGQDYWLVKNSWGPSWGESGYIKIARNHKNHCG 306

Query: 947 IEQIAGYATI 956
           I  +A Y  +
Sbjct: 307 IASMASYPVV 316



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 122/222 (54%), Gaps = 12/222 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P + DWR++    P  DQ  CGSCW+FS  G LEGQ  +KTG+LV  S+  LV+C+K  
Sbjct: 100 LPKSVDWRQRGAVTPVKDQGHCGSCWSFSATGSLEGQLFLKTGRLVSLSEQNLVDCSKTY 159

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-F 126
             SGC+G     + +Y     G+++E  YPY+     +  C + + KV   T K ++   
Sbjct: 160 GNSGCEGGLMNQAFQYVRDNKGIDTEASYPYE---ARENNCRFKEDKVG-GTDKGYVDIL 215

Query: 127 NGSET-MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
             SE  ++  +   GP+SV ++ S     +    + K ++ CSP  L H VL VGYG ++
Sbjct: 216 EASEKDLQSAVATVGPISVRIDASHESFQFYSEGVYK-EQYCSPSQLDHGVLTVGYGTEN 274

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
              YWLV+NSWGP   + G+ KI R + N CGI  +A Y  +
Sbjct: 275 GQDYWLVKNSWGPSWGESGYIKIARNHKNHCGIASMASYPVV 316



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V  ++ CSP  L H VL VGYG ++   YWLV+NSWGP   + G+ KI R + N CGI  
Sbjct: 250  VYKEQYCSPSQLDHGVLTVGYGTENGQDYWLVKNSWGPSWGESGYIKIARNHKNHCGIAS 309

Query: 1018 IAGYATI 1024
            +A Y  +
Sbjct: 310  MASYPVV 316


>gi|332249835|ref|XP_003274061.1| PREDICTED: cathepsin W [Nomascus leucogenys]
          Length = 403

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 157/346 (45%), Gaps = 43/346 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 67  EAFKLFQIQFNRSYLSPEEHARRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 126

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G       Y R       + + +   E +  VP   DWRK      P  DQ  C  
Sbjct: 127 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFTCDWRKVAGAISPIKDQKNCNC 179

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  + I     V+ S  +L++C++   GC G F ++  I   + +GL SE
Sbjct: 180 CWAMAAAGNIEALWRINFWDFVDVSVQELLDCSRCGDGCHGGFVWDAFITVLNNSGLASE 239

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIH 883
           KDYP++       +C + K   K+   +DF+    SE  + + L  YGP++V +N   + 
Sbjct: 240 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNSEHRIAQYLATYGPITVTINMKPLQ 297

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN--------------------IPYWLVR 923
            Y    I+    TC P  + H+VLLVG+G   +                     PYW+++
Sbjct: 298 LYRKGVIKATSTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILK 357

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV--VKNDETCSP 967
           NSWG    ++G+F++ RG+N CGI +    A +    +K   +C P
Sbjct: 358 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARVQKPDMKPRVSCPP 403



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 149/333 (44%), Gaps = 40/333 (12%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 67  EAFKLFQIQFNRSYLSPEEHARRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 126

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G       Y R       + + +   E +  VP   DWRK      P  DQ  C  
Sbjct: 127 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFTCDWRKVAGAISPIKDQKNCNC 179

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  + I     V+ S  +L++C++   GC G    +  I   + +GL SE
Sbjct: 180 CWAMAAAGNIEALWRINFWDFVDVSVQELLDCSRCGDGCHGGFVWDAFITVLNNSGLASE 239

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIH 518
           KDYP++ G     +C + K   K+   +DF+    SE  + + L  YGP++V +N   + 
Sbjct: 240 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNSEHRIAQYLATYGPITVTINMKPLQ 297

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDDIPYWLAR 558
            Y    I+    TC P  + H+VLLVG+G                         PYW+ +
Sbjct: 298 LYRKGVIKATSTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILK 357

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 358 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 390



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 123/251 (49%), Gaps = 28/251 (11%)

Query: 1   MLMEVEKDGP---VPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLV 56
           M  E+  + P   VP   DWRK      P  DQ +C  CWA + AG +E  + I     V
Sbjct: 142 MGREIRSEEPEESVPFTCDWRKVAGAISPIKDQKNCNCCWAMAAAGNIEALWRINFWDFV 201

Query: 57  EFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKV 115
           + S  +L++C++   GC G F ++  I   + +GL SEKDYP++       +C + K   
Sbjct: 202 DVSVQELLDCSRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQ 259

Query: 116 KLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 174
           K+   +DF+    SE  + + L  YGP++V +N   +  Y    I+    TC P  + H+
Sbjct: 260 KVAWIQDFIMLQNSEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATSTTCDPQLVDHS 319

Query: 175 VLLVGYGKQDN--------------------IPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           VLLVG+G   +                     PYW+++NSWG    ++G+F++ RG+N C
Sbjct: 320 VLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTC 379

Query: 215 GIEQIAGYATI 225
           GI +    A +
Sbjct: 380 GITKFPLTARV 390



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 20/81 (24%)

Query: 964  TCSPYDLGHAVLLVGYGK--------------------QDDIPYWLVRNSWGPIGPDEGF 1003
            TC P  + H+VLLVG+G                         PYW+++NSWG    ++G+
Sbjct: 310  TCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGY 369

Query: 1004 FKIERGNNACGIEQIAGYATI 1024
            F++ RG+N CGI +    A +
Sbjct: 370  FRLHRGSNTCGITKFPLTARV 390


>gi|56756677|gb|AAW26511.1| unknown [Schistosoma japonicum]
          Length = 331

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 156/319 (48%), Gaps = 31/319 (9%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+            + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------KRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGL 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC G F + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGGGFMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSV-LLN 878
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SV ++ 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            D +  Y       ND  C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+
Sbjct: 254 LDSLTMYKSGVFESND--CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKL 311

Query: 939 ERG-NNACGIEQIAGYATI 956
            R  +N CG+   A +  +
Sbjct: 312 RRNKHNMCGVASNASFPLL 330



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR         +Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSKWDWRDHGAVTAVKNQGLCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYGK+  
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESND--CKYGDINHGVLVVGYGKEHG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 290 KDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 155/320 (48%), Gaps = 32/320 (10%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+            + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------KRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGL 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGGCDGLEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GCGG   ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGG-GFMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN 513
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG+ 
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 514 S-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +   +  Y       ND  C   D+ H VL+VGYGK+    YWL +NSWG +   +G+FK
Sbjct: 253 ALDSLTMYKSGVFESND--CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFK 310

Query: 573 IERG-NNACGIEQIAGYATI 591
           + R  +N CG+   A +  +
Sbjct: 311 LRRNKHNMCGVASNASFPLL 330



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|301607871|ref|XP_002933519.1| PREDICTED: cathepsin O-like [Xenopus (Silurana) tropicalis]
          Length = 370

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 152/310 (49%), Gaps = 34/310 (10%)

Query: 658 FKAFIVKRGRQYANDEEI-KERFEYFKQDGHKKH--------------ERYGTSEFSDRS 702
           F  FI K GR Y +  ++ +ER++ F +   +++                YG ++FSD S
Sbjct: 66  FLDFIQKYGRGYKDGSQVFQERYQIFLKSTERQNYLNAIALPTNLTSAAHYGINQFSDLS 125

Query: 703 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
            EE        +    Y      +   ++  +        P  +DWR K +  P  +Q +
Sbjct: 126 AEEFFYTYLRSFPTGNYTSNKPFKNSAQQYFL--------PLRFDWRDKKLVTPVKNQLS 177

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ--AG 820
           CG+CWAFS+ G +E  YAIK   L E S  Q+++C+   SGC+G     ++++ +Q    
Sbjct: 178 CGACWAFSVVGAVESAYAIKWHTLEELSVQQVIDCSYLDSGCNGGSTNGALKWLYQTKTK 237

Query: 821 LESEKDYPYKNANGEKFKCAY-DKSKVKL-FTGKDFLHFNGSE-TMKKILYKYGPLSVLL 877
           L    +Y +K   G    C Y  K+   +   G +   F+G+E  M K+L   GP+ V++
Sbjct: 238 LVRASEYNFKAKTG---LCHYFPKTDFGVSINGYETQDFSGTEDAMMKMLVDLGPMVVIV 294

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           N+    DY G  I+ +  + +P    HAVL++GY K  + PYW+V+NSWG     +G+  
Sbjct: 295 NAVSWQDYLGGIIQHHCSSGAP---NHAVLVIGYDKTGDTPYWIVKNSWGTAWGADGYVY 351

Query: 938 IERGNNACGI 947
           I+ G N CGI
Sbjct: 352 IKMGENICGI 361



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 143/317 (45%), Gaps = 47/317 (14%)

Query: 292 FKAFIVKRGRQYANDEEI-KERFEYFKQDGHKKH--------------ERYGTSEFSDRS 336
           F  FI K GR Y +  ++ +ER++ F +   +++                YG ++FSD S
Sbjct: 66  FLDFIQKYGRGYKDGSQVFQERYQIFLKSTERQNYLNAIALPTNLTSAAHYGINQFSDLS 125

Query: 337 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
            EE        +    Y      +   ++  +        P  +DWR K +  P  +Q +
Sbjct: 126 AEEFFYTYLRSFPTGNYTSNKPFKNSAQQYFL--------PLRFDWRDKKLVTPVKNQLS 177

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC-GGCDGLEQPIEYTHQAG 455
           CG+CWAFS+ G +E  YAIK   L E S  Q+++C+   SGC GG         Y  +  
Sbjct: 178 CGACWAFSVVGAVESAYAIKWHTLEELSVQQVIDCSYLDSGCNGGSTNGALKWLYQTKTK 237

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSET---------MKKILYKY 505
           L    +Y ++   G    C Y       F   DF +  NG ET         M K+L   
Sbjct: 238 LVRASEYNFKAKTG---LCHY-------FPKTDFGVSINGYETQDFSGTEDAMMKMLVDL 287

Query: 506 GPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           GP+ V +N+     Y G  I+ +  + +P    HAVL++GY K  D PYW+ +NSWG   
Sbjct: 288 GPMVVIVNAVSWQDYLGGIIQHHCSSGAP---NHAVLVIGYDKTGDTPYWIVKNSWGTAW 344

Query: 566 PDEGFFKIERGNNACGI 582
             +G+  I+ G N CGI
Sbjct: 345 GADGYVYIKMGENICGI 361



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 11/211 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K +  P  +Q  CG+CWAFS+ G +E  YAIK   L E S  Q+++C+   
Sbjct: 157 LPLRFDWRDKKLVTPVKNQLSCGACWAFSVVGAVESAYAIKWHTLEELSVQQVIDCSYLD 216

Query: 71  SGCDGCFFEPSIEYTHQ--AGLESEKDYPYKNANGEKFKCAY-DKSKVKL-FTGKDFLHF 126
           SGC+G     ++++ +Q    L    +Y +K   G    C Y  K+   +   G +   F
Sbjct: 217 SGCNGGSTNGALKWLYQTKTKLVRASEYNFKAKTG---LCHYFPKTDFGVSINGYETQDF 273

Query: 127 NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           +G+E  M K+L   GP+ V++N+    DY G  I+ +  + +P    HAVL++GY K  +
Sbjct: 274 SGTEDAMMKMLVDLGPMVVIVNAVSWQDYLGGIIQHHCSSGAP---NHAVLVIGYDKTGD 330

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
            PYW+V+NSWG     +G+  I+ G N CGI
Sbjct: 331 TPYWIVKNSWGTAWGADGYVYIKMGENICGI 361


>gi|281427380|ref|NP_001163996.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|281427798|ref|NP_001164001.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|270001241|gb|EEZ97688.1| cathepsin L precursor [Tribolium castaneum]
 gi|270016928|gb|EFA13374.1| hypothetical protein TcasGA2_TC001950 [Tribolium castaneum]
          Length = 328

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 160/339 (47%), Gaps = 36/339 (10%)

Query: 638 VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY---- 693
           V  LA+  +L      +   +  F +   +QY++  E   R   F QD   K E +    
Sbjct: 6   VLALAVVATLAVPQSPVHAKWAEFKLTHKKQYSSPIEELRRKAIF-QDNLVKIEEHNAKF 64

Query: 694 ---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV-EKMLMEVEKDG-PV 742
                      ++F+D + +E +             R +A + K+ EK+ +   K G P 
Sbjct: 65  AKGEVTYTKAVNQFADMTADEFMAYV---------NRGLATKPKMNEKLRIPFVKSGKPA 115

Query: 743 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ-- 800
               DWR K VT    DQ  CGSCW+FS  G +EGQ AI    L   S+  LV+C+ Q  
Sbjct: 116 AAEVDWRSKAVT-EVKDQGQCGSCWSFSTTGAVEGQLAISGKGLTSLSEQNLVDCSSQYG 174

Query: 801 CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNG 859
            +GC+G + + + +Y H  G+ SE  YPY   +G    C +D S+ V    G   +    
Sbjct: 175 NAGCNGGWMDSAFDYIHDNGIMSESAYPYTAMDG---NCRFDASQSVTSLQGYYDIPSGD 231

Query: 860 SETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
              ++  +   GP++V L+ ++ +  Y+G  +   D TCS   L H VL+VGYG +    
Sbjct: 232 ESALQDAVANNGPVAVALDATEELQLYSGGVLY--DTTCSAQALNHGVLVVGYGSEGGQD 289

Query: 919 YWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           YW+V+NSWG    ++G+++  R  NN CGI   A Y  +
Sbjct: 290 YWIVKNSWGSGWGEQGYWRQARNRNNNCGIATAASYPAL 328



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 157/340 (46%), Gaps = 37/340 (10%)

Query: 272 VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY---- 327
           V  LA+  +L      +   +  F +   +QY++  E   R   F QD   K E +    
Sbjct: 6   VLALAVVATLAVPQSPVHAKWAEFKLTHKKQYSSPIEELRRKAIF-QDNLVKIEEHNAKF 64

Query: 328 ---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV-EKMLMEVEKDG-PV 376
                      ++F+D + +E +             R +A + K+ EK+ +   K G P 
Sbjct: 65  AKGEVTYTKAVNQFADMTADEFMAYV---------NRGLATKPKMNEKLRIPFVKSGKPA 115

Query: 377 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 436
               DWR K VT    DQ  CGSCW+FS  G +EGQ AI    L   S+  LV+C+ Q  
Sbjct: 116 AAEVDWRSKAVT-EVKDQGQCGSCWSFSTTGAVEGQLAISGKGLTSLSEQNLVDCSSQY- 173

Query: 437 GCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSK-VKLFTGKDFLYFN 493
           G  GC+G  ++   +Y H  G+ SE  YPY   +G    C +D S+ V    G   +   
Sbjct: 174 GNAGCNGGWMDSAFDYIHDNGIMSESAYPYTAMDG---NCRFDASQSVTSLQGYYDIPSG 230

Query: 494 GSETMKKILYKYGPLSVGLN-SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI 552
               ++  +   GP++V L+ +  +  Y+G  +   D TCS   L H VL+VGYG +   
Sbjct: 231 DESALQDAVANNGPVAVALDATEELQLYSGGVLY--DTTCSAQALNHGVLVVGYGSEGGQ 288

Query: 553 PYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
            YW+ +NSWG    ++G+++  R  NN CGI   A Y  +
Sbjct: 289 DYWIVKNSWGSGWGEQGYWRQARNRNNNCGIATAASYPAL 328



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 118/226 (52%), Gaps = 11/226 (4%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           V+   P     DWR K VT    DQ  CGSCW+FS  G +EGQ AI    L   S+  LV
Sbjct: 109 VKSGKPAAAEVDWRSKAVT-EVKDQGQCGSCWSFSTTGAVEGQLAISGKGLTSLSEQNLV 167

Query: 65  ECAKQ--CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGK 121
           +C+ Q   +GC+G + + + +Y H  G+ SE  YPY   +G    C +D S+ V    G 
Sbjct: 168 DCSSQYGNAGCNGGWMDSAFDYIHDNGIMSESAYPYTAMDG---NCRFDASQSVTSLQGY 224

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
             +       ++  +   GP++V L+ ++ +  Y+G  +   D TCS   L H VL+VGY
Sbjct: 225 YDIPSGDESALQDAVANNGPVAVALDATEELQLYSGGVLY--DTTCSAQALNHGVLVVGY 282

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           G +    YW+V+NSWG    ++G+++  R  NN CGI   A Y  +
Sbjct: 283 GSEGGQDYWIVKNSWGSGWGEQGYWRQARNRNNNCGIATAASYPAL 328


>gi|380798253|gb|AFE71002.1| pro-cathepsin H preproprotein, partial [Macaca mulatta]
          Length = 242

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 119/224 (53%), Gaps = 17/224 (7%)

Query: 740 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           GP P + DWRKK N   P  +Q ACGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 21  GPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 80

Query: 799 KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
           +  +  GC G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  
Sbjct: 81  QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVA 136

Query: 856 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 909
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 137 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYKTGI---YSSTSCHKTPDKVNHAVLAV 193

Query: 910 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 194 GYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 237



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 118/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 21  GPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 80

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  
Sbjct: 81  QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVA 136

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 137 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYKTGI---YSSTSCHKTPDKVNHAVLAV 193

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 194 GYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 237



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 116/226 (51%), Gaps = 20/226 (8%)

Query: 374 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           GP P + DWRKK N   P  +Q ACGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 21  GPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 80

Query: 433 KQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF- 489
           +  +  G   GL  Q  EY  +  G+  E  YPY+  +G+   C +   K   F  KD  
Sbjct: 81  QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVA 136

Query: 490 -LYFNGSETMKKILYKYGPLSVGLN------SHLIHFYNGTPIRKNDETCSPYDLGHAVL 542
            +     E M + +  Y P+S           +    Y+ T   K     +P  + HAVL
Sbjct: 137 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYKTGIYSSTSCHK-----TPDKVNHAVL 191

Query: 543 LVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
            VGYG+++ IPYW+ +NSWGP     G+F IERG N CG+   A Y
Sbjct: 192 AVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 237



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 182  TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 237


>gi|394331822|gb|AFN27130.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 138/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VP A DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPYAVDWRKKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGC G     + E+        + +
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDSGCGGGLMLQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY +++G   +C+     V       ++    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY     +PYW+++NSWG    + G+ ++  G 
Sbjct: 271 MSYESGVL----TSCAGITLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGENGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 139/304 (45%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VP A DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPYAVDWRKKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDSGCGGGLML-QAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY + +G   +C+     V       ++    SET M   L K GP+S+ +++  
Sbjct: 210 TEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY    ++PYW+ +NSWG    + G+ ++  G
Sbjct: 270 FMSYESGVL----TSCAGITLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGENGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VP A DWRKK    P  DQ  CGSCWAFS  G +E Q+A+   +L   S+ QLV C  + 
Sbjct: 126 VPYAVDWRKKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC G     + E+        + +E  YPY +++G   +C+     V       ++   
Sbjct: 186 SGCGGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +
Sbjct: 246 SSETVMAAWLAKNGPISIAVDASSFMSYESGVL----TSCAGITLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    + G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGENGYVRVTMGVNAC 329



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY    ++PYW+++NSWG    + G+ ++  G NAC
Sbjct: 280  SCAGITLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGENGYVRVTMGVNAC 329


>gi|308322047|gb|ADO28161.1| cathepsin H [Ictalurus furcatus]
          Length = 326

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 152/316 (48%), Gaps = 32/316 (10%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-------KHE-RYGTSEFSDRSPEEILC 708
            FK ++ +  +QY   EE  +R + F ++  K        H+ R G ++FSD +  E   
Sbjct: 27  VFKTWMSEHNKQYG-LEEYYQRLQIFTENKKKIDTHNAGNHKFRMGLNQFSDMTFAEF-- 83

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCW 767
                   + +  +   +E        V   G  PD+ DWRKK N      +Q ACGSCW
Sbjct: 84  --------KKFYLLKEPQECNATKGNHVRGVGLYPDSIDWRKKGNYVTEVKNQGACGSCW 135

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEY-THQAGLESE 824
            FS  G LE   AI TGKL   ++ QLV+CA   +  GC+G     + EY  +  GL +E
Sbjct: 136 TFSTTGCLESVTAIATGKLPLLAEQQLVDCAGAFNNHGCNGGLPSQAFEYIMYNKGLMTE 195

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI--LYKYGPLSVLLN--SD 880
            DYPY   +G    C +D      F  KD ++    + M  +  + +  P+S+      +
Sbjct: 196 DDYPYVGRDG---PCKFDPKLAAAFV-KDVVNITKYDEMGIVDAVARLNPVSIAFEVLPE 251

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 940
            +H  +G     N+   +   + HAVL VGY +++  PYW+V+NSWGP    +G+F IER
Sbjct: 252 FMHYKDGV-YTSNECHNTTETVNHAVLAVGYAEENGTPYWIVKNSWGPQWGIDGYFYIER 310

Query: 941 GNNACGIEQIAGYATI 956
           G N CG+   A Y  +
Sbjct: 311 GQNMCGLAACASYPLV 326



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 149/316 (47%), Gaps = 31/316 (9%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-------KHE-RYGTSEFSDRSPEEILC 342
            FK ++ +  +QY   EE  +R + F ++  K        H+ R G ++FSD +  E   
Sbjct: 27  VFKTWMSEHNKQYG-LEEYYQRLQIFTENKKKIDTHNAGNHKFRMGLNQFSDMTFAEF-- 83

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCW 401
                   + +  +   +E        V   G  PD+ DWRKK N      +Q ACGSCW
Sbjct: 84  --------KKFYLLKEPQECNATKGNHVRGVGLYPDSIDWRKKGNYVTEVKNQGACGSCW 135

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEY-THQAGLESE 459
            FS  G LE   AI TGKL   ++ QLV+CA   +  G   GL  Q  EY  +  GL +E
Sbjct: 136 TFSTTGCLESVTAIATGKLPLLAEQQLVDCAGAFNNHGCNGGLPSQAFEYIMYNKGLMTE 195

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKI--LYKYGPLSVGLN--SH 515
            DYPY   +G    C +D      F  KD +     + M  +  + +  P+S+       
Sbjct: 196 DDYPYVGRDG---PCKFDPKLAAAFV-KDVVNITKYDEMGIVDAVARLNPVSIAFEVLPE 251

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            +H+ +G     N+   +   + HAVL VGY +++  PYW+ +NSWGP    +G+F IER
Sbjct: 252 FMHYKDGV-YTSNECHNTTETVNHAVLAVGYAEENGTPYWIVKNSWGPQWGIDGYFYIER 310

Query: 576 GNNACGIEQIAGYATI 591
           G N CG+   A Y  +
Sbjct: 311 GQNMCGLAACASYPLV 326



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 118/230 (51%), Gaps = 13/230 (5%)

Query: 4   EVEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
            V   G  PD+ DWRKK N      +Q  CGSCW FS  G LE   AI TGKL   ++ Q
Sbjct: 102 HVRGVGLYPDSIDWRKKGNYVTEVKNQGACGSCWTFSTTGCLESVTAIATGKLPLLAEQQ 161

Query: 63  LVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
           LV+CA   +  GC+G     + EY  +  GL +E DYPY   +G    C +D      F 
Sbjct: 162 LVDCAGAFNNHGCNGGLPSQAFEYIMYNKGLMTEDDYPYVGRDG---PCKFDPKLAAAFV 218

Query: 120 GKDFLHFNGSETMKKI--LYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAV 175
            KD ++    + M  +  + +  P+S+      + +H  +G     N+   +   + HAV
Sbjct: 219 -KDVVNITKYDEMGIVDAVARLNPVSIAFEVLPEFMHYKDGV-YTSNECHNTTETVNHAV 276

Query: 176 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           L VGY +++  PYW+V+NSWGP    +G+F IERG N CG+   A Y  +
Sbjct: 277 LAVGYAEENGTPYWIVKNSWGPQWGIDGYFYIERGQNMCGLAACASYPLV 326



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 37/55 (67%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            + HAVL VGY +++  PYW+V+NSWGP    +G+F IERG N CG+   A Y  +
Sbjct: 272  VNHAVLAVGYAEENGTPYWIVKNSWGPQWGIDGYFYIERGQNMCGLAACASYPLV 326


>gi|394331820|gb|AFN27129.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 138/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+   +L   S+ QLV C  + +GC G     + E+        + +
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDNGCRGGLMLQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY ++ G   +C+     V       ++    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSTGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLV Y +   +PYW+++NSWG    + G+ ++  G 
Sbjct: 271 MSYQSGVL----TSCAGMPLNHGVLLVWYNRTGEVPYWVIKNSWGENWGENGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 138/304 (45%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+   +L   S+ QLV C  + +GC G   L Q  E+        + 
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDNGCRGGLML-QAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY +  G   +C+     V       ++    SET M   L K GP+S+ +++  
Sbjct: 210 TEDSYPYVSSTGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLV Y +  ++PYW+ +NSWG    + G+ ++  G
Sbjct: 270 FMSYQSGVL----TSCAGMPLNHGVLLVWYNRTGEVPYWVIKNSWGENWGENGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 105/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWRKK    P  DQ  CGSCWAFS  G +E Q+A+   +L   S+ QLV C  + 
Sbjct: 126 VPDAVDWRKKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +E  YPY ++ G   +C+     V       ++   
Sbjct: 186 NGCRGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSTGYVPECSNSSQLVPGARIDGYMTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y    +     +C+   L H VLLV Y +   +
Sbjct: 246 SSETVMAAWLAKNGPISIAVDASSFMSYQSGVL----TSCAGMPLNHGVLLVWYNRTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    + G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGENWGENGYVRVTMGVNAC 329



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 32/50 (64%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLV Y +  ++PYW+++NSWG    + G+ ++  G NAC
Sbjct: 280  SCAGMPLNHGVLLVWYNRTGEVPYWVIKNSWGENWGENGYVRVTMGVNAC 329


>gi|375073982|gb|AFA34858.1| cathepsin L-like protein [Trypanosoma dionisii]
          Length = 467

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 144/317 (45%), Gaps = 24/317 (7%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSP 703
           E +   F  F  + GR Y +  E   R   F+++            H  +G + FSD + 
Sbjct: 32  ETLASQFADFKQRYGRVYKSAAEEAFRLSVFRKNLLDAKLHAAANPHATFGVTPFSDLTR 91

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+    +     A   K  ++ ++V   G  P A DWR +    P  DQ  C
Sbjct: 92  EE------FRSRHHSGAAHFAAGRKRARVPVDVGV-GDAPAAVDWRDRGAVTPVKDQGQC 144

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAG 820
           GSCWAFS  G +EGQ+ +    L   S+  LV C    SGCDG     + E+    H   
Sbjct: 145 GSCWAFSAIGNVEGQWFLAGNALTSLSEQMLVSCDTMDSGCDGGLMNSAFEWIVEHHNGT 204

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           + +E+ Y Y + +G    C      V  + TG   L  + ++ M   L   GPL+V +++
Sbjct: 205 VYTEESYRYASGDGIAQPCRTSGRTVGAVITGHVKLPPDEAK-MATWLAANGPLAVAVDA 263

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
                Y G  +     +C   +L H VLLVGY      PYW+V+NSWG +  ++G+ +I 
Sbjct: 264 SSWMFYTGGVL----TSCVSNELDHGVLLVGYNDSAAPPYWIVKNSWGTLWGEDGYVRIA 319

Query: 940 RGNNACGIEQIAGYATI 956
           +G N C +++ A  A +
Sbjct: 320 KGTNQCLVKEEASSAVV 336



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 145/318 (45%), Gaps = 25/318 (7%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSP 337
           E +   F  F  + GR Y +  E   R   F+++            H  +G + FSD + 
Sbjct: 32  ETLASQFADFKQRYGRVYKSAAEEAFRLSVFRKNLLDAKLHAAANPHATFGVTPFSDLTR 91

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+    +     A   K  ++ ++V   G  P A DWR +    P  DQ  C
Sbjct: 92  EE------FRSRHHSGAAHFAAGRKRARVPVDVGV-GDAPAAVDWRDRGAVTPVKDQGQC 144

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGC---DGLEQPIEYTHQA 454
           GSCWAFS  G +EGQ+ +    L   S+  LV C    SGC G       E  +E+ H  
Sbjct: 145 GSCWAFSAIGNVEGQWFLAGNALTSLSEQMLVSCDTMDSGCDGGLMNSAFEWIVEH-HNG 203

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
            + +E+ Y Y +G+G    C      V  + TG   L  + ++ M   L   GPL+V ++
Sbjct: 204 TVYTEESYRYASGDGIAQPCRTSGRTVGAVITGHVKLPPDEAK-MATWLAANGPLAVAVD 262

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           +    FY G  +     +C   +L H VLLVGY      PYW+ +NSWG +  ++G+ +I
Sbjct: 263 ASSWMFYTGGVL----TSCVSNELDHGVLLVGYNDSAAPPYWIVKNSWGTLWGEDGYVRI 318

Query: 574 ERGNNACGIEQIAGYATI 591
            +G N C +++ A  A +
Sbjct: 319 AKGTNQCLVKEEASSAVV 336



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 109/221 (49%), Gaps = 9/221 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P A DWR +    P  DQ  CGSCWAFS  G +EGQ+ +    L   S+  LV C  
Sbjct: 121 GDAPAAVDWRDRGAVTPVKDQGQCGSCWAFSAIGNVEGQWFLAGNALTSLSEQMLVSCDT 180

Query: 69  QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFL 124
             SGCDG     + E+    H   + +E+ Y Y + +G    C      V  + TG   L
Sbjct: 181 MDSGCDGGLMNSAFEWIVEHHNGTVYTEESYRYASGDGIAQPCRTSGRTVGAVITGHVKL 240

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
             + ++ M   L   GPL+V +++     Y G  +     +C   +L H VLLVGY    
Sbjct: 241 PPDEAK-MATWLAANGPLAVAVDASSWMFYTGGVL----TSCVSNELDHGVLLVGYNDSA 295

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
             PYW+V+NSWG +  ++G+ +I +G N C +++ A  A +
Sbjct: 296 APPYWIVKNSWGTLWGEDGYVRIAKGTNQCLVKEEASSAVV 336


>gi|226476110|emb|CAX72145.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 31/319 (9%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGL 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC+G F + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCEGGFMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSV-LLN 878
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SV ++ 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            D +  Y       N+  C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+
Sbjct: 254 LDSLTMYKSGVFESNE--CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKL 311

Query: 939 ERG-NNACGIEQIAGYATI 956
            R  +N CG+   A +  +
Sbjct: 312 RRNKHNMCGVASNASFPLL 330



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 117/221 (52%), Gaps = 10/221 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR         +Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSKWDWRDHGAVTAVKNQGLCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC+G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCEGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              +T++K +Y+YGP+SV ++  D +  Y       N+  C   D+ H VL+VGYGK+  
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESNE--CKYGDINHGVLVVGYGKEHG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 290 KDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 157/320 (49%), Gaps = 32/320 (10%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGL 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+    G  GC+G  ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP-YGNYGCEGGFMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN 513
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG+ 
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 514 S-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +   +  Y       N+  C   D+ H VL+VGYGK+    YWL +NSWG +   +G+FK
Sbjct: 253 ALDSLTMYKSGVFESNE--CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFK 310

Query: 573 IERG-NNACGIEQIAGYATI 591
           + R  +N CG+   A +  +
Sbjct: 311 LRRNKHNMCGVASNASFPLL 330



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ H VL+VGYGK+    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKYGDINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|37911662|gb|AAR05023.1| cathepsin L-like protein [Tenebrio molitor]
          Length = 336

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 161/337 (47%), Gaps = 28/337 (8%)

Query: 640 TLAIEG-SLTFDNENILETFKAFIVKRGRQYANDEE-------IKERFEYFKQDGHKKHE 691
            +AI G S    +  + E ++ F     R Y N +E        +++ E F++   K  +
Sbjct: 8   AIAIYGASAALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQ 67

Query: 692 -----RYGTSEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDA 745
                  G + F+D +PEE+   T G       ++  +  + + +  L    +    P +
Sbjct: 68  GLVSYTLGVNLFTDMTPEEMKAYTHGLIMPADLHKNGIPIKTREDLGLNASVR---YPAS 124

Query: 746 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS--QLVECAKQCSG 803
           +DWR + +  P  +Q +CGSCWAFS  G +E Q  I  G   + S S  QLV+C     G
Sbjct: 125 FDWRDQGMVSPVKNQGSCGSCWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPNALG 184

Query: 804 CDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSE 861
           C G +   +  Y  Q  G++SE  YPY+ A+G    C YD ++V    +G  +L      
Sbjct: 185 CSGGWMNDAFTYVAQNGGIDSEGAYPYEMADG---NCHYDPNQVAARLSGYVYLSGPDEN 241

Query: 862 TMKKILYKYGPLSVLLNSD-LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
            +  ++   GP++V  ++D     Y+G      + TC      HAVL+VGYG ++   YW
Sbjct: 242 MLADMVATKGPVAVAFDADDPFGSYSGGVYY--NPTCETNKFTHAVLIVGYGNENGQDYW 299

Query: 921 LVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
           LV+NSWG     +G+FKI R  NN CGI  +A   T+
Sbjct: 300 LVKNSWGDGWGLDGYFKIARNANNHCGIAGVASVPTL 336



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 115/220 (52%), Gaps = 11/220 (5%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS--QLVECAKQ 69
           P ++DWR + +  P  +Q  CGSCWAFS  G +E Q  I  G   + S S  QLV+C   
Sbjct: 122 PASFDWRDQGMVSPVKNQGSCGSCWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPN 181

Query: 70  CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFN 127
             GC G +   +  Y  Q  G++SE  YPY+ A+G    C YD ++V    +G  +L   
Sbjct: 182 ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADG---NCHYDPNQVAARLSGYVYLSGP 238

Query: 128 GSETMKKILYKYGPLSVLLNSD-LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
               +  ++   GP++V  ++D     Y+G      + TC      HAVL+VGYG ++  
Sbjct: 239 DENMLADMVATKGPVAVAFDADDPFGSYSGGVYY--NPTCETNKFTHAVLIVGYGNENGQ 296

Query: 187 PYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
            YWLV+NSWG     +G+FKI R  NN CGI  +A   T+
Sbjct: 297 DYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVASVPTL 336



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 156/338 (46%), Gaps = 29/338 (8%)

Query: 274 TLAIEG-SLTFDNENILETFKAFIVKRGRQYANDEE-------IKERFEYFKQDGHKKHE 325
            +AI G S    +  + E ++ F     R Y N +E        +++ E F++   K  +
Sbjct: 8   AIAIYGASAALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQ 67

Query: 326 -----RYGTSEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDA 379
                  G + F+D +PEE+   T G       ++  +  + + +  L    +    P +
Sbjct: 68  GLVSYTLGVNLFTDMTPEEMKAYTHGLIMPADLHKNGIPIKTREDLGLNASVR---YPAS 124

Query: 380 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS--QLVECAKQCSG 437
           +DWR + +  P  +Q +CGSCWAFS  G +E Q  I  G   + S S  QLV+C     G
Sbjct: 125 FDWRDQGMVSPVKNQGSCGSCWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPNALG 184

Query: 438 CGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGS 495
           C G   +     Y  Q  G++SE  YPY   +G    C YD ++V    +G  +L     
Sbjct: 185 CSG-GWMNDAFTYVAQNGGIDSEGAYPYEMADG---NCHYDPNQVAARLSGYVYLSGPDE 240

Query: 496 ETMKKILYKYGPLSVGLNSH-LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPY 554
             +  ++   GP++V  ++      Y+G      + TC      HAVL+VGYG ++   Y
Sbjct: 241 NMLADMVATKGPVAVAFDADDPFGSYSGGVYY--NPTCETNKFTHAVLIVGYGNENGQDY 298

Query: 555 WLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           WL +NSWG     +G+FKI R  NN CGI  +A   T+
Sbjct: 299 WLVKNSWGDGWGLDGYFKIARNANNHCGIAGVASVPTL 336



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAG 1020
            + TC      HAVL+VGYG ++   YWLV+NSWG     +G+FKI R  NN CGI  +A 
Sbjct: 273  NPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVAS 332

Query: 1021 YATI 1024
              T+
Sbjct: 333  VPTL 336


>gi|340504799|gb|EGR31212.1| papain family cysteine protease, putative [Ichthyophthirius
           multifiliis]
          Length = 250

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 124/251 (49%), Gaps = 10/251 (3%)

Query: 346 FKWSERTYERIVADREKVEKML---MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
            +WS   Y   V +  KV K        + +  +P  +DWR++ +  P   Q  CG CW 
Sbjct: 6   IRWSTGNYNICVNNESKVLKRKNNEFYQQYNQVLPSYFDWREQGIITPVKYQDTCGGCWT 65

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           F+  G++E QYA+K  KLV FS+ QL++C     GC G    +         GLE+ +DY
Sbjct: 66  FATTGVIESQYALKYNKLVNFSEQQLIDCDSINDGCRGGLMTDAYKAIQEMGGLETSEDY 125

Query: 463 -PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYN 521
             Y N  G+   C  D +KV       +      E +++ L + GP++VG+N+  + FY 
Sbjct: 126 GEYLNSKGQ---CKIDSNKVSAKVINWYQISEDEEAIRRELVQNGPIAVGVNARFLQFYQ 182

Query: 522 GTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACG 581
           G  +   D       + HAVL+VGYG+++   YW+ +N WG      G+FK+ RG   CG
Sbjct: 183 GGIL---DPKLCDDSINHAVLIVGYGEENGKKYWIIKNQWGKSWGINGYFKLVRGKKQCG 239

Query: 582 IEQIAGYATID 592
           +   A  A I+
Sbjct: 240 VHTYASIAFIE 250



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 126/251 (50%), Gaps = 11/251 (4%)

Query: 712 FKWSERTYERIVADREKVEKML---MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
            +WS   Y   V +  KV K        + +  +P  +DWR++ +  P   Q  CG CW 
Sbjct: 6   IRWSTGNYNICVNNESKVLKRKNNEFYQQYNQVLPSYFDWREQGIITPVKYQDTCGGCWT 65

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 827
           F+  G++E QYA+K  KLV FS+ QL++C     GC G     + +   +  GLE+ +DY
Sbjct: 66  FATTGVIESQYALKYNKLVNFSEQQLIDCDSINDGCRGGLMTDAYKAIQEMGGLETSEDY 125

Query: 828 -PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 886
             Y N+ G+   C  D +KV       +      E +++ L + GP++V +N+  +  Y 
Sbjct: 126 GEYLNSKGQ---CKIDSNKVSAKVINWYQISEDEEAIRRELVQNGPIAVGVNARFLQFYQ 182

Query: 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 946
           G  +   D       + HAVL+VGYG+++   YW+++N WG      G+FK+ RG   CG
Sbjct: 183 GGIL---DPKLCDDSINHAVLIVGYGEENGKKYWIIKNQWGKSWGINGYFKLVRGKKQCG 239

Query: 947 IEQIAGYATID 957
           +   A  A I+
Sbjct: 240 VHTYASIAFIE 250



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 115/218 (52%), Gaps = 8/218 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR++ +  P   Q  CG CW F+  G++E QYA+K  KLV FS+ QL++C    
Sbjct: 39  LPSYFDWREQGIITPVKYQDTCGGCWTFATTGVIESQYALKYNKLVNFSEQQLIDCDSIN 98

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDY-PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
            GC G     + +   +  GLE+ +DY  Y N+ G+   C  D +KV       +     
Sbjct: 99  DGCRGGLMTDAYKAIQEMGGLETSEDYGEYLNSKGQ---CKIDSNKVSAKVINWYQISED 155

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            E +++ L + GP++V +N+  +  Y G  +   D       + HAVL+VGYG+++   Y
Sbjct: 156 EEAIRRELVQNGPIAVGVNARFLQFYQGGIL---DPKLCDDSINHAVLIVGYGEENGKKY 212

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           W+++N WG      G+FK+ RG   CG+   A  A I+
Sbjct: 213 WIIKNQWGKSWGINGYFKLVRGKKQCGVHTYASIAFIE 250



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 35/56 (62%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 1025
            + HAVL+VGYG+++   YW+++N WG      G+FK+ RG   CG+   A  A I+
Sbjct: 195  INHAVLIVGYGEENGKKYWIIKNQWGKSWGINGYFKLVRGKKQCGVHTYASIAFIE 250


>gi|320169652|gb|EFW46551.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 325

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 151/316 (47%), Gaps = 28/316 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHE-RYGTSEFSDRSPEEILC 708
           F  +     RQYA+ +E   R E +        + +   +H    G +EF D +  E   
Sbjct: 21  FAEWKALHNRQYASAQEEALRQEIYLSNLELINEHNAAGRHSYTLGMNEFGDLAHHEFAA 80

Query: 709 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
           K  G +++     +  A    + +M+        +PD+ DWR   +  P  +Q  CGSCW
Sbjct: 81  KYLGVRFNGVNATKSFASSTYLPRMV-------SLPDSVDWRTAGIVTPVKNQGQCGSCW 133

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEY-THQAGLESE 824
           +FS  G +EGQ+A KTG LV  S+  LV+C+ Q    GC+G   + + EY     G+++E
Sbjct: 134 SFSTTGSVEGQHARKTGTLVSLSEQNLVDCSSQEGNEGCNGGLMDDAFEYIIKNGGIDTE 193

Query: 825 KDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
             YPY    G  KF  A   + V  +  +D +   GSE+ ++  +   GP+SV +++  I
Sbjct: 194 ASYPYTATTGTCKFNAANIGATVASY--QDII--TGSESDLQNAVATVGPVSVAIDASHI 249

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DNIPYWLVRNSWGPIGPDEGFFKIER- 940
           +         N++ CS   L H VL VGYG   +   YWLV+NSWG      G+  + R 
Sbjct: 250 NFQFYFTGVYNEKKCSTTQLDHGVLAVGYGTSTEGKDYWLVKNSWGATWGKAGYIWMSRN 309

Query: 941 GNNACGIEQIAGYATI 956
            +N CGI   A Y  +
Sbjct: 310 ADNQCGIATSASYPLV 325



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 152/317 (47%), Gaps = 29/317 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHE-RYGTSEFSDRSPEEILC 342
           F  +     RQYA+ +E   R E +        + +   +H    G +EF D +  E   
Sbjct: 21  FAEWKALHNRQYASAQEEALRQEIYLSNLELINEHNAAGRHSYTLGMNEFGDLAHHEFAA 80

Query: 343 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
           K  G +++     +  A    + +M+        +PD+ DWR   +  P  +Q  CGSCW
Sbjct: 81  KYLGVRFNGVNATKSFASSTYLPRMV-------SLPDSVDWRTAGIVTPVKNQGQCGSCW 133

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEY-THQAGLES 458
           +FS  G +EGQ+A KTG LV  S+  LV+C+ Q  G  GC+G  ++   EY     G+++
Sbjct: 134 SFSTTGSVEGQHARKTGTLVSLSEQNLVDCSSQ-EGNEGCNGGLMDDAFEYIIKNGGIDT 192

Query: 459 EKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           E  YPY    G  KF  A   + V  +  +D +   GSE+ ++  +   GP+SV +++  
Sbjct: 193 EASYPYTATTGTCKFNAANIGATVASY--QDII--TGSESDLQNAVATVGPVSVAIDASH 248

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEGFFKIER 575
           I+F        N++ CS   L H VL VGYG   +   YWL +NSWG      G+  + R
Sbjct: 249 INFQFYFTGVYNEKKCSTTQLDHGVLAVGYGTSTEGKDYWLVKNSWGATWGKAGYIWMSR 308

Query: 576 -GNNACGIEQIAGYATI 591
             +N CGI   A Y  +
Sbjct: 309 NADNQCGIATSASYPLV 325



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD+ DWR   +  P  +Q  CGSCW+FS  G +EGQ+A KTG LV  S+  LV+C+ Q 
Sbjct: 108 LPDSVDWRTAGIVTPVKNQGQCGSCWSFSTTGSVEGQHARKTGTLVSLSEQNLVDCSSQE 167

Query: 70  -CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHF 126
              GC+G   + + EY     G+++E  YPY    G  KF  A   + V  +  +D +  
Sbjct: 168 GNEGCNGGLMDDAFEYIIKNGGIDTEASYPYTATTGTCKFNAANIGATVASY--QDII-- 223

Query: 127 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-D 184
            GSE+ ++  +   GP+SV +++  I+         N++ CS   L H VL VGYG   +
Sbjct: 224 TGSESDLQNAVATVGPVSVAIDASHINFQFYFTGVYNEKKCSTTQLDHGVLAVGYGTSTE 283

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
              YWLV+NSWG      G+  + R  +N CGI   A Y  +
Sbjct: 284 GKDYWLVKNSWGATWGKAGYIWMSRNADNQCGIATSASYPLV 325



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIER-GNNACGIE 1016
            V N++ CS   L H VL VGYG   +   YWLV+NSWG      G+  + R  +N CGI 
Sbjct: 258  VYNEKKCSTTQLDHGVLAVGYGTSTEGKDYWLVKNSWGATWGKAGYIWMSRNADNQCGIA 317

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 318  TSASYPLV 325


>gi|318844127|ref|NP_001187181.1| cathspsin H precursor [Ictalurus punctatus]
 gi|196475594|gb|ACG76366.1| cathspsin H [Ictalurus punctatus]
          Length = 326

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 163/344 (47%), Gaps = 35/344 (10%)

Query: 629 RITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK 688
           +I    VA +  +     LT ++E +   FK ++ +  +QY   EE   R + F ++  K
Sbjct: 2   KILIVTVALLHCVCATPLLTEEDEYV---FKTWMSEHNKQYG-LEEYYPRLQIFTENKKK 57

Query: 689 -------KHE-RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 740
                   H+ R G ++FSD +  E           + +  +   +E        V   G
Sbjct: 58  IDTHNAGNHKFRMGLNQFSDMTFAEF----------KKFYLLKEPQECNATKGNHVRGVG 107

Query: 741 PVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
             PD+ DWRKK N      +Q ACGSCW FS  G LE   AI TGKL   ++ QLV+CA 
Sbjct: 108 LYPDSIDWRKKGNYVTEVKNQGACGSCWTFSTTGCLESVTAIATGKLPLLAEQQLVDCAG 167

Query: 800 QCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 856
             +  GC+G     + EY  +  GL +E DYPY   +G    C +D      F  KD ++
Sbjct: 168 AFNNHGCNGGLPSQAFEYIMYNKGLMTEDDYPYVGRDG---PCKFDPKLAAAFV-KDVVN 223

Query: 857 FNGSETMKKI--LYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 912
               + M  +  + +  P+S+      + +H  +G     N+   +   + HAVL VGY 
Sbjct: 224 ITKYDEMGIVDAVARLNPVSIAFEVLPEFMHYKDGV-YTSNECHNTTETVNHAVLAVGYA 282

Query: 913 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           +++  PYW+V+NSWGP    +G+F IERG N CG+   A Y  +
Sbjct: 283 EENGTPYWIVKNSWGPQWGIDGYFYIERGQNMCGLAACASYPLV 326



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 160/344 (46%), Gaps = 34/344 (9%)

Query: 263 RITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK 322
           +I    VA +  +     LT ++E +   FK ++ +  +QY   EE   R + F ++  K
Sbjct: 2   KILIVTVALLHCVCATPLLTEEDEYV---FKTWMSEHNKQYG-LEEYYPRLQIFTENKKK 57

Query: 323 -------KHE-RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 374
                   H+ R G ++FSD +  E           + +  +   +E        V   G
Sbjct: 58  IDTHNAGNHKFRMGLNQFSDMTFAEF----------KKFYLLKEPQECNATKGNHVRGVG 107

Query: 375 PVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
             PD+ DWRKK N      +Q ACGSCW FS  G LE   AI TGKL   ++ QLV+CA 
Sbjct: 108 LYPDSIDWRKKGNYVTEVKNQGACGSCWTFSTTGCLESVTAIATGKLPLLAEQQLVDCAG 167

Query: 434 QCSGCGGCDGL-EQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY 491
             +  G   GL  Q  EY  +  GL +E DYPY   +G    C +D      F  KD + 
Sbjct: 168 AFNNHGCNGGLPSQAFEYIMYNKGLMTEDDYPYVGRDG---PCKFDPKLAAAFV-KDVVN 223

Query: 492 FNGSETMKKI--LYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG 547
               + M  +  + +  P+S+        +H+ +G     N+   +   + HAVL VGY 
Sbjct: 224 ITKYDEMGIVDAVARLNPVSIAFEVLPEFMHYKDGV-YTSNECHNTTETVNHAVLAVGYA 282

Query: 548 KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           +++  PYW+ +NSWGP    +G+F IERG N CG+   A Y  +
Sbjct: 283 EENGTPYWIVKNSWGPQWGIDGYFYIERGQNMCGLAACASYPLV 326



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 118/230 (51%), Gaps = 13/230 (5%)

Query: 4   EVEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
            V   G  PD+ DWRKK N      +Q  CGSCW FS  G LE   AI TGKL   ++ Q
Sbjct: 102 HVRGVGLYPDSIDWRKKGNYVTEVKNQGACGSCWTFSTTGCLESVTAIATGKLPLLAEQQ 161

Query: 63  LVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
           LV+CA   +  GC+G     + EY  +  GL +E DYPY   +G    C +D      F 
Sbjct: 162 LVDCAGAFNNHGCNGGLPSQAFEYIMYNKGLMTEDDYPYVGRDG---PCKFDPKLAAAFV 218

Query: 120 GKDFLHFNGSETMKKI--LYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAV 175
            KD ++    + M  +  + +  P+S+      + +H  +G     N+   +   + HAV
Sbjct: 219 -KDVVNITKYDEMGIVDAVARLNPVSIAFEVLPEFMHYKDGV-YTSNECHNTTETVNHAV 276

Query: 176 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           L VGY +++  PYW+V+NSWGP    +G+F IERG N CG+   A Y  +
Sbjct: 277 LAVGYAEENGTPYWIVKNSWGPQWGIDGYFYIERGQNMCGLAACASYPLV 326



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 37/55 (67%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            + HAVL VGY +++  PYW+V+NSWGP    +G+F IERG N CG+   A Y  +
Sbjct: 272  VNHAVLAVGYAEENGTPYWIVKNSWGPQWGIDGYFYIERGQNMCGLAACASYPLV 326


>gi|403293523|ref|XP_003937763.1| PREDICTED: cathepsin W [Saimiri boliviensis boliviensis]
          Length = 373

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 167/361 (46%), Gaps = 45/361 (12%)

Query: 643 IEGSLTFDNEN-----ILETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERY 693
           I GSLT  +       + E FK F  +  R Y   EE   R + F     Q    + E +
Sbjct: 22  IRGSLTAQDLGPQPLELKEAFKFFQRQFNRSYLTPEEHARRLDIFAHNLAQAQQLQEEDF 81

Query: 694 GTSEF-----SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 748
           GT+EF     SD + EE     G       + R       + +++   E +  VP   DW
Sbjct: 82  GTAEFGVTPFSDLTEEEFGQLYG-------HRRAAGGVPGMGRVVGPEEPEESVPHTCDW 134

Query: 749 RK-KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGC 807
           RK         +Q  C  CWA + AG +E  + I   K V  S  +L++C +  +GC G 
Sbjct: 135 RKVAGAISSIRNQGNCNCCWAMAAAGNIEALWGINFLKFVNVSVQELLDCGRCGNGCYGG 194

Query: 808 F-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKK 865
           + +E  +   + +G+ SE+DYP++ AN    +C + K+  K+   +DF+    +E  + +
Sbjct: 195 YVWEAFLTVLNNSGVASERDYPFR-ANFRPHRC-HAKTSNKVAWIQDFIFLPDNEQRIAQ 252

Query: 866 ILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN--------- 916
            L  YGP++V +N   +  Y    I+ +  TC P  + H+VLLVG+G   +         
Sbjct: 253 YLATYGPITVTINMKYLKLYQKGVIKASPTTCDPQFVDHSVLLVGFGSDKSEGMGAETVS 312

Query: 917 --------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV--VKNDETCS 966
                    PYW+++NSWG    +EG+F++ RG+N CGI +    A +    VK   +C 
Sbjct: 313 SPSRHPRSTPYWILKNSWGAQWGEEGYFRLHRGSNTCGITKYPVTARVQKPNVKPQLSCP 372

Query: 967 P 967
           P
Sbjct: 373 P 373



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 158/349 (45%), Gaps = 42/349 (12%)

Query: 277 IEGSLTFDNEN-----ILETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERY 327
           I GSLT  +       + E FK F  +  R Y   EE   R + F     Q    + E +
Sbjct: 22  IRGSLTAQDLGPQPLELKEAFKFFQRQFNRSYLTPEEHARRLDIFAHNLAQAQQLQEEDF 81

Query: 328 GTSEF-----SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 382
           GT+EF     SD + EE     G       + R       + +++   E +  VP   DW
Sbjct: 82  GTAEFGVTPFSDLTEEEFGQLYG-------HRRAAGGVPGMGRVVGPEEPEESVPHTCDW 134

Query: 383 RK-KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGC 441
           RK         +Q  C  CWA + AG +E  + I   K V  S  +L++C +  +GC G 
Sbjct: 135 RKVAGAISSIRNQGNCNCCWAMAAAGNIEALWGINFLKFVNVSVQELLDCGRCGNGCYGG 194

Query: 442 DGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKK 500
              E  +   + +G+ SE+DYP+R  N    +C + K+  K+   +DF++   +E  + +
Sbjct: 195 YVWEAFLTVLNNSGVASERDYPFR-ANFRPHRC-HAKTSNKVAWIQDFIFLPDNEQRIAQ 252

Query: 501 ILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD---------- 550
            L  YGP++V +N   +  Y    I+ +  TC P  + H+VLLVG+G             
Sbjct: 253 YLATYGPITVTINMKYLKLYQKGVIKASPTTCDPQFVDHSVLLVGFGSDKSEGMGAETVS 312

Query: 551 -------DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
                    PYW+ +NSWG    +EG+F++ RG+N CGI +    A + 
Sbjct: 313 SPSRHPRSTPYWILKNSWGAQWGEEGYFRLHRGSNTCGITKYPVTARVQ 361



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 123/241 (51%), Gaps = 22/241 (9%)

Query: 6   EKDGPVPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           E +  VP   DWRK         +Q +C  CWA + AG +E  + I   K V  S  +L+
Sbjct: 123 EPEESVPHTCDWRKVAGAISSIRNQGNCNCCWAMAAAGNIEALWGINFLKFVNVSVQELL 182

Query: 65  ECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C +  +GC G + +E  +   + +G+ SE+DYP++ AN    +C + K+  K+   +DF
Sbjct: 183 DCGRCGNGCYGGYVWEAFLTVLNNSGVASERDYPFR-ANFRPHRC-HAKTSNKVAWIQDF 240

Query: 124 LHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +    +E  + + L  YGP++V +N   +  Y    I+ +  TC P  + H+VLLVG+G 
Sbjct: 241 IFLPDNEQRIAQYLATYGPITVTINMKYLKLYQKGVIKASPTTCDPQFVDHSVLLVGFGS 300

Query: 183 QDN-----------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
             +                  PYW+++NSWG    +EG+F++ RG+N CGI +    A +
Sbjct: 301 DKSEGMGAETVSSPSRHPRSTPYWILKNSWGAQWGEEGYFRLHRGSNTCGITKYPVTARV 360

Query: 226 D 226
            
Sbjct: 361 Q 361



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 17/79 (21%)

Query: 964  TCSPYDLGHAVLLVGYGKQDD-----------------IPYWLVRNSWGPIGPDEGFFKI 1006
            TC P  + H+VLLVG+G                      PYW+++NSWG    +EG+F++
Sbjct: 283  TCDPQFVDHSVLLVGFGSDKSEGMGAETVSSPSRHPRSTPYWILKNSWGAQWGEEGYFRL 342

Query: 1007 ERGNNACGIEQIAGYATID 1025
             RG+N CGI +    A + 
Sbjct: 343  HRGSNTCGITKYPVTARVQ 361


>gi|268578473|ref|XP_002644219.1| Hypothetical protein CBG17217 [Caenorhabditis briggsae]
          Length = 413

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 170/373 (45%), Gaps = 31/373 (8%)

Query: 596 QRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIE---------GS 646
           +R  L     ++I ++ LL  + +      L +R        + T+A E          +
Sbjct: 44  RRRALRAVVYLMITSILLLAVLQTYYTYNRLKERQVPHNERGIQTIAHEYIAYTEKSYST 103

Query: 647 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEI 706
           +T        T K  + +    Y  DE +     + KQ  H     YG ++ SD + EE 
Sbjct: 104 VTHRYNKSYSTSKESLKRLNAYYTTDENVAN---WNKQKEHGS-AVYGHNDLSDWTDEEF 159

Query: 707 LCKTGFKWSERTYERIVADREKVEKM-----LMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
              T     +  Y+R+  D E ++ +      M+ E++GP+PD +DWR +NV  P   Q 
Sbjct: 160 ---TKTLLPKSFYQRLHKDAEFIKPIPESLAAMKGERNGPLPDFFDWRDRNVVTPVKAQG 216

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGL 821
            CGSCWAF+    +E  YAI  G+    S+  L++C    + CDG   + +  Y H+ GL
Sbjct: 217 QCGSCWAFASTATVEAAYAIAHGEKRNLSEQTLLDCDLDDNACDGGDEDKAFRYIHRQGL 276

Query: 822 ESEKDYPY--KNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
               D PY     N       Y+ +K+K      FLH +  ++M   L  +GP+++ ++ 
Sbjct: 277 AYAVDLPYVAHRQNTCSVDGHYNTTKIK---AAYFLHHD-EDSMINWLVNFGPVNIGMSV 332

Query: 880 -DLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDN-IPYWLVRNSWGPI-GPDEGF 935
              +  Y G     ++  C    +G HA+L+ GYG  +    YW+V+NSWG   G + G+
Sbjct: 333 IQPMRAYKGGVFTPSEYACKNEVIGLHALLITGYGTSEKGEKYWIVKNSWGNTWGVENGY 392

Query: 936 FKIERGNNACGIE 948
               RG NACGIE
Sbjct: 393 IYFARGINACGIE 405



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 32/374 (8%)

Query: 230 QRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIE---------GS 280
           +R  L     ++I ++ LL  + +      L +R        + T+A E          +
Sbjct: 44  RRRALRAVVYLMITSILLLAVLQTYYTYNRLKERQVPHNERGIQTIAHEYIAYTEKSYST 103

Query: 281 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEI 340
           +T        T K  + +    Y  DE +     + KQ  H     YG ++ SD + EE 
Sbjct: 104 VTHRYNKSYSTSKESLKRLNAYYTTDENVAN---WNKQKEHGS-AVYGHNDLSDWTDEEF 159

Query: 341 LCKTGFKWSERTYERIVADREKVEKM-----LMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
              T     +  Y+R+  D E ++ +      M+ E++GP+PD +DWR +NV  P   Q 
Sbjct: 160 ---TKTLLPKSFYQRLHKDAEFIKPIPESLAAMKGERNGPLPDFFDWRDRNVVTPVKAQG 216

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAG 455
            CGSCWAF+    +E  YAI  G+    S+  L++C    + C G D  ++   Y H+ G
Sbjct: 217 QCGSCWAFASTATVEAAYAIAHGEKRNLSEQTLLDCDLDDNACDGGDE-DKAFRYIHRQG 275

Query: 456 LESEKDYPY--RNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
           L    D PY     N       Y+ +K+K      +   +  ++M   L  +GP+++G++
Sbjct: 276 LAYAVDLPYVAHRQNTCSVDGHYNTTKIK----AAYFLHHDEDSMINWLVNFGPVNIGMS 331

Query: 514 S-HLIHFYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDD-IPYWLARNSWGPI-GPDEG 569
               +  Y G     ++  C    +G HA+L+ GYG  +    YW+ +NSWG   G + G
Sbjct: 332 VIQPMRAYKGGVFTPSEYACKNEVIGLHALLITGYGTSEKGEKYWIVKNSWGNTWGVENG 391

Query: 570 FFKIERGNNACGIE 583
           +    RG NACGIE
Sbjct: 392 YIYFARGINACGIE 405



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 115/221 (52%), Gaps = 10/221 (4%)

Query: 3   MEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
           M+ E++GP+PD +DWR +NV  P   Q  CGSCWAF+    +E  YAI  G+    S+  
Sbjct: 189 MKGERNGPLPDFFDWRDRNVVTPVKAQGQCGSCWAFASTATVEAAYAIAHGEKRNLSEQT 248

Query: 63  LVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPY--KNANGEKFKCAYDKSKVKLFTG 120
           L++C    + CDG   + +  Y H+ GL    D PY     N       Y+ +K+K    
Sbjct: 249 LLDCDLDDNACDGGDEDKAFRYIHRQGLAYAVDLPYVAHRQNTCSVDGHYNTTKIK---A 305

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLG-HAVLLV 178
             FLH +  ++M   L  +GP+++ ++    +  Y G     ++  C    +G HA+L+ 
Sbjct: 306 AYFLHHD-EDSMINWLVNFGPVNIGMSVIQPMRAYKGGVFTPSEYACKNEVIGLHALLIT 364

Query: 179 GYGKQDN-IPYWLVRNSWGPI-GPDEGFFKIERGNNACGIE 217
           GYG  +    YW+V+NSWG   G + G+    RG NACGIE
Sbjct: 365 GYGTSEKGEKYWIVKNSWGNTWGVENGYIYFARGINACGIE 405


>gi|351694995|gb|EHA97913.1| Cathepsin L1 [Heterocephalus glaber]
          Length = 278

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/224 (39%), Positives = 120/224 (53%), Gaps = 13/224 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P + DWRKK    P  +Q  CGSCWAFS  G LEGQ   KTG+LV  S+  LV+C++  
Sbjct: 59  LPKSVDWRKKGYVTPVKNQGQCGSCWAFSATGSLEGQMFRKTGQLVSLSEQNLVDCSQPQ 118

Query: 70  -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              GC+G   + + EY  +  GLESEK YPY+  +G    C Y K ++       F+   
Sbjct: 119 GNQGCNGGLMDFAFEYVKENKGLESEKSYPYEGKDG---SCRY-KPELSAANDTGFVDIP 174

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ--- 183
             E  + K + + GP+SV +++ L+           D  CS  DL H VL+VGYG +   
Sbjct: 175 QREKALMKAVAEKGPISVAVDAGLMSFQFYKDGIYFDPECSSKDLNHGVLVVGYGYEEVD 234

Query: 184 -DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            +   YWLV+NSWGP    EG+ KI R  NN CGI   A Y + 
Sbjct: 235 TEKNEYWLVKNSWGPEWGAEGYIKIARNRNNHCGIATAASYPST 278



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/224 (39%), Positives = 120/224 (53%), Gaps = 13/224 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
           +P + DWRKK    P  +Q  CGSCWAFS  G LEGQ   KTG+LV  S+  LV+C++  
Sbjct: 59  LPKSVDWRKKGYVTPVKNQGQCGSCWAFSATGSLEGQMFRKTGQLVSLSEQNLVDCSQPQ 118

Query: 801 -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 858
              GC+G   + + EY  +  GLESEK YPY+  +G    C Y K ++       F+   
Sbjct: 119 GNQGCNGGLMDFAFEYVKENKGLESEKSYPYEGKDG---SCRY-KPELSAANDTGFVDIP 174

Query: 859 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ--- 914
             E  + K + + GP+SV +++ L+           D  CS  DL H VL+VGYG +   
Sbjct: 175 QREKALMKAVAEKGPISVAVDAGLMSFQFYKDGIYFDPECSSKDLNHGVLVVGYGYEEVD 234

Query: 915 -DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
            +   YWLV+NSWGP    EG+ KI R  NN CGI   A Y + 
Sbjct: 235 TEKNEYWLVKNSWGPEWGAEGYIKIARNRNNHCGIATAASYPST 278



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 121/227 (53%), Gaps = 18/227 (7%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P + DWRKK    P  +Q  CGSCWAFS  G LEGQ   KTG+LV  S+  LV+C+ Q 
Sbjct: 59  LPKSVDWRKKGYVTPVKNQGQCGSCWAFSATGSLEGQMFRKTGQLVSLSEQNLVDCS-QP 117

Query: 436 SGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            G  GC+G  ++   EY  +  GLESEK YPY   +G    C Y   K +L    D  + 
Sbjct: 118 QGNQGCNGGLMDFAFEYVKENKGLESEKSYPYEGKDG---SCRY---KPELSAANDTGFV 171

Query: 493 N---GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           +     + + K + + GP+SV +++ L+ F         D  CS  DL H VL+VGYG +
Sbjct: 172 DIPQREKALMKAVAEKGPISVAVDAGLMSFQFYKDGIYFDPECSSKDLNHGVLVVGYGYE 231

Query: 550 ----DDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
               +   YWL +NSWGP    EG+ KI R  NN CGI   A Y + 
Sbjct: 232 EVDTEKNEYWLVKNSWGPEWGAEGYIKIARNRNNHCGIATAASYPST 278



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 957  DVVKNDETCSPYDLGHAVLLVGYGKQD----DIPYWLVRNSWGPIGPDEGFFKIERG-NN 1011
            D +  D  CS  DL H VL+VGYG ++       YWLV+NSWGP    EG+ KI R  NN
Sbjct: 206  DGIYFDPECSSKDLNHGVLVVGYGYEEVDTEKNEYWLVKNSWGPEWGAEGYIKIARNRNN 265

Query: 1012 ACGIEQIAGYATI 1024
             CGI   A Y + 
Sbjct: 266  HCGIATAASYPST 278


>gi|401416326|ref|XP_003872658.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|14348750|emb|CAC41275.1| CPB2 protein [Leishmania mexicana]
 gi|322488882|emb|CBZ24132.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 359

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 139/301 (46%), Gaps = 22/301 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
               +         A R   +           VPDA DWR+K    P  DQ  CGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGECGSCWAF 153

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C     GCDG     + ++  Q     L +E  
Sbjct: 154 SSVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLYTEDS 213

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+ + S++ +    D     GS  + M   L K GP+++ L++     
Sbjct: 214 YPYVSGNGYLPECS-NSSELVVGAQIDSHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 272

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C   ++ HAVLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 273 YKSGVLT----ACIGKEVNHAVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 328

Query: 945 C 945
           C
Sbjct: 329 C 329



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 140/302 (46%), Gaps = 23/302 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
               +         A R   +           VPDA DWR+K    P  DQ  CGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGECGSCWAF 153

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C     GC G   L Q  ++  Q     L +E 
Sbjct: 154 SSVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLML-QAFDWLLQNTNGHLYTED 212

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+ + S++ +    D     GS  + M   L K GP+++ L++    
Sbjct: 213 SYPYVSGNGYLPECS-NSSELVVGAQIDSHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 271

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C   ++ HAVLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 272 SYKSGVLT----ACIGKEVNHAVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 327

Query: 579 AC 580
           AC
Sbjct: 328 AC 329



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 10/209 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ +CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKDQGECGSCWAFSSVGNIEGQWYLAGHELVSLSEQQLVSCDDMN 185

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GCDG     + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     
Sbjct: 186 DGCDGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYLPECS-NSSELVVGAQIDSHVLI 244

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C   ++ HAVLLVGY     
Sbjct: 245 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLT----ACIGKEVNHAVLLVGYDMTGE 300

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 301 VPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|332326591|gb|AEE42619.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 137/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  BQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKBQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+    LV  S+ QLV C  + SGC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAXHGLVRLSEQQLVSCDDKDSGCGGGLMTQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY ++ G+  +C      V       ++     ET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIESXETVMAAWLAKSGPISIAVDASPF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYESGVL----TSCVGKXLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 138/304 (45%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  BQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKBQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+    LV  S+ QLV C  + SGCGG   + Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAXHGLVRLSEQQLVSCDDKDSGCGG-GLMTQAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY +  G+  +C      V       ++     ET M   L K GP+S+ +++  
Sbjct: 210 TEDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIESXETVMAAWLAKSGPISIAVDASP 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G
Sbjct: 270 FMSYESGVL----TSCVGKXLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 104/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  BQ  CGSCWAFS  G +E Q+A+    LV  S+ QLV C  + 
Sbjct: 126 VPDAVDWREKGAVTPVKBQGACGSCWAFSAVGNIESQWAVAXHGLVRLSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC G     + E+        + +E  YPY ++ G+  +C      V       ++   
Sbjct: 186 SGCGGGLMTQAFEWLLRNMNGTMFTEDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
             ET M   L K GP+S+ +++     Y    +     +C    L H VLLVGY     +
Sbjct: 246 SXETVMAAWLAKSGPISIAVDASPFMSYESGVL----TSCVGKXLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C    L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCVGKXLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|339896953|ref|XP_003392238.1| cathepsin L-like protease [Leishmania infantum JPCM5]
 gi|14349351|gb|AAC38832.2| cysteine protease [Leishmania chagasi]
 gi|17384031|emb|CAD12393.1| cysteine proteinase [Leishmania infantum]
 gi|321398984|emb|CBZ08377.1| cathepsin L-like protease [Leishmania infantum JPCM5]
          Length = 443

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 145/307 (47%), Gaps = 26/307 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT--HQAGLE-S 823
           WAFS  G +E Q+A     LV  S+ QLV C  + +GC+G     + E+   H  G+  +
Sbjct: 151 WAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C      V       ++    +ET M   L + GP+++ +++   
Sbjct: 211 EKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY K   +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVVMGL 326

Query: 943 NACGIEQ 949
           NAC + +
Sbjct: 327 NACLLSE 333



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 145/308 (47%), Gaps = 27/308 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT--HQAGLE- 457
           WAFS  G +E Q+A     LV  S+ QLV C  + +GC G   L Q  E+   H  G+  
Sbjct: 151 WAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLML-QAFEWLLRHMYGIVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +EK YPY +GNG+  +C      V       ++    +ET M   L + GP+++ +++  
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY K   +PYW+ +NSWG    ++G+ ++  G
Sbjct: 270 FMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVVMG 325

Query: 577 NNACGIEQ 584
            NAC + +
Sbjct: 326 LNACLLSE 333



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 8/212 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A     LV  S+ QLV C  + 
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEYT--HQAGLE-SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC+G     + E+   H  G+  +EK YPY + NG+  +C      V       ++   
Sbjct: 186 NGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            +ET M   L + GP+++ +++     Y    +     +C+   L H VLLVGY K   +
Sbjct: 246 SNETVMAAWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           PYW+++NSWG    ++G+ ++  G NAC + +
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVVMGLNACLLSE 333


>gi|72008176|ref|XP_780713.1| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 335

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 159/337 (47%), Gaps = 36/337 (10%)

Query: 277 IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GHKK 323
           +  SL+    +  E +  +  + G++Y +DEE   R   ++++             GH  
Sbjct: 13  VVSSLSMSFTDFDEDWNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGHFT 72

Query: 324 HERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPDAW 380
           +   G ++F+D   EE +   TGF+         V    K  K    +     G +P   
Sbjct: 73  Y-ALGMNQFADLKNEEFVAMMTGFR---------VNGTSKAAKGSTFLPSNNIGELPKTV 122

Query: 381 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG 440
           DWR K    P  DQ  CGSCWAFS  G LEGQ+   TGKLV  S+  LV+C+ +  G  G
Sbjct: 123 DWRTKGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSGK-EGNEG 181

Query: 441 CDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSE 496
           CDG  ++Q  +Y  +A G+++E+ YPY+  +GE   C + K+ +    TG   +  +   
Sbjct: 182 CDGGLMDQAFQYIIKAGGIDTEESYPYKAVDGE---CHFKKANIGATVTGYTDVTSDSET 238

Query: 497 TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYW 555
            ++K +   GP+SV +++  + F        N+  CS   L H VL VGYG   D   YW
Sbjct: 239 ALQKAVAHIGPISVAIDASHMSFQLYKSGVYNEPDCSSTLLDHGVLAVGYGTTSDGTDYW 298

Query: 556 LARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           + +NSW       G+  + R  +N CGI   A Y  +
Sbjct: 299 IVKNSWAETWGMNGYLWMSRNKDNQCGIATQASYPLV 335



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 157/336 (46%), Gaps = 35/336 (10%)

Query: 643 IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GHKK 689
           +  SL+    +  E +  +  + G++Y +DEE   R   ++++             GH  
Sbjct: 13  VVSSLSMSFTDFDEDWNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGHFT 72

Query: 690 HERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPDAW 746
           +   G ++F+D   EE +   TGF+         V    K  K    +     G +P   
Sbjct: 73  Y-ALGMNQFADLKNEEFVAMMTGFR---------VNGTSKAAKGSTFLPSNNIGELPKTV 122

Query: 747 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGC 804
           DWR K    P  DQ  CGSCWAFS  G LEGQ+   TGKLV  S+  LV+C+ +    GC
Sbjct: 123 DWRTKGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSGKEGNEGC 182

Query: 805 DGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSET 862
           DG   + + +Y  +A G+++E+ YPYK  +GE   C + K+ +    TG   +  +    
Sbjct: 183 DGGLMDQAFQYIIKAGGIDTEESYPYKAVDGE---CHFKKANIGATVTGYTDVTSDSETA 239

Query: 863 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWL 921
           ++K +   GP+SV +++  +          N+  CS   L H VL VGYG   D   YW+
Sbjct: 240 LQKAVAHIGPISVAIDASHMSFQLYKSGVYNEPDCSSTLLDHGVLAVGYGTTSDGTDYWI 299

Query: 922 VRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           V+NSW       G+  + R  +N CGI   A Y  +
Sbjct: 300 VKNSWAETWGMNGYLWMSRNKDNQCGIATQASYPLV 335



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P   DWR K    P  DQ  CGSCWAFS  G LEGQ+   TGKLV  S+  LV+C+ 
Sbjct: 116 GELPKTVDWRTKGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSG 175

Query: 69  Q--CSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFL 124
           +    GCDG   + + +Y  +A G+++E+ YPYK  +GE   C + K+ +    TG   +
Sbjct: 176 KEGNEGCDGGLMDQAFQYIIKAGGIDTEESYPYKAVDGE---CHFKKANIGATVTGYTDV 232

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQ 183
             +    ++K +   GP+SV +++  +          N+  CS   L H VL VGYG   
Sbjct: 233 TSDSETALQKAVAHIGPISVAIDASHMSFQLYKSGVYNEPDCSSTLLDHGVLAVGYGTTS 292

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           D   YW+V+NSW       G+  + R  +N CGI   A Y  +
Sbjct: 293 DGTDYWIVKNSWAETWGMNGYLWMSRNKDNQCGIATQASYPLV 335



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIE 1016
            V N+  CS   L H VL VGYG   D   YW+V+NSW       G+  + R  +N CGI 
Sbjct: 268  VYNEPDCSSTLLDHGVLAVGYGTTSDGTDYWIVKNSWAETWGMNGYLWMSRNKDNQCGIA 327

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 328  TQASYPLV 335


>gi|94421564|gb|ABF18889.1| cathepsin-L [Lygus lineolaris]
          Length = 314

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 154/312 (49%), Gaps = 36/312 (11%)

Query: 647 LTFDNENILETFKAFIVKRGRQY-ANDEEIKERFEYF--KQDGHKKHERY---------G 694
           L+ DN+   E++KA   K G+ Y +N+ E   R  YF  K+   + + R+         G
Sbjct: 19  LSDDNQAEWESYKA---KYGKTYESNENEAARRTIYFMAKEKVMEHNARFEQGLVSYKLG 75

Query: 695 TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
            + F+D    E      F+     Y R    R  V   ++ VE +  +P + DWR K   
Sbjct: 76  LNSFADMHNGE------FRKMMNGYRRGTP-RNSV---VVHVESNITLPASVDWRTKGAV 125

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPS 812
            P  +Q  CGSCWAFS  G LEGQ+A+K GKLV  S+ +LV+C  A+   GCDG   + +
Sbjct: 126 TPIKNQGQCGSCWAFSTTGSLEGQHALKKGKLVSLSEQELVDCSAAEGNDGCDGGLMDDA 185

Query: 813 IEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKY 870
             Y  +  G+++E+ YPY    GE   C++ KS V           +GSE+ ++      
Sbjct: 186 FTYIKKNNGIDTEQSYPY---TGEDGTCSFKKSDVAATVTGFVDVTSGSESGLQDASATI 242

Query: 871 GPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
           GP+SV +++       Y       +D  CS  +L H VL+VGYG  D   YWLV+NSWG 
Sbjct: 243 GPISVAIDASSWDFQLYESGVYDVSD--CSTTELDHGVLVVGYGTDDGTAYWLVKNSWGT 300

Query: 929 IGPDEGFFKIER 940
                G+ ++ R
Sbjct: 301 DWGHHGYIQMSR 312



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 151/311 (48%), Gaps = 33/311 (10%)

Query: 281 LTFDNENILETFKAFIVKRGRQY-ANDEEIKERFEYF--KQDGHKKHERY---------G 328
           L+ DN+   E++KA   K G+ Y +N+ E   R  YF  K+   + + R+         G
Sbjct: 19  LSDDNQAEWESYKA---KYGKTYESNENEAARRTIYFMAKEKVMEHNARFEQGLVSYKLG 75

Query: 329 TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
            + F+D    E      F+     Y R    R  V   ++ VE +  +P + DWR K   
Sbjct: 76  LNSFADMHNGE------FRKMMNGYRRGTP-RNSV---VVHVESNITLPASVDWRTKGAV 125

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ+A+K GKLV  S+ +LV+C+    G  GCDG     
Sbjct: 126 TPIKNQGQCGSCWAFSTTGSLEGQHALKKGKLVSLSEQELVDCSA-AEGNDGCDGGLMDD 184

Query: 449 EYTH---QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYK 504
            +T+     G+++E+ YPY    GE   C++ KS V           +GSE+ ++     
Sbjct: 185 AFTYIKKNNGIDTEQSYPY---TGEDGTCSFKKSDVAATVTGFVDVTSGSESGLQDASAT 241

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPI 564
            GP+SV +++    F        +   CS  +L H VL+VGYG  D   YWL +NSWG  
Sbjct: 242 IGPISVAIDASSWDFQLYESGVYDVSDCSTTELDHGVLVVGYGTDDGTAYWLVKNSWGTD 301

Query: 565 GPDEGFFKIER 575
               G+ ++ R
Sbjct: 302 WGHHGYIQMSR 312



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 116/215 (53%), Gaps = 11/215 (5%)

Query: 1   MLMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
           +++ VE +  +P + DWR K    P  +Q  CGSCWAFS  G LEGQ+A+K GKLV  S+
Sbjct: 103 VVVHVESNITLPASVDWRTKGAVTPIKNQGQCGSCWAFSTTGSLEGQHALKKGKLVSLSE 162

Query: 61  SQLVEC--AKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL 117
            +LV+C  A+   GCDG   + +  Y  +  G+++E+ YPY    GE   C++ KS V  
Sbjct: 163 QELVDCSAAEGNDGCDGGLMDDAFTYIKKNNGIDTEQSYPY---TGEDGTCSFKKSDVAA 219

Query: 118 FTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHA 174
                    +GSE+ ++      GP+SV +++       Y       +D  CS  +L H 
Sbjct: 220 TVTGFVDVTSGSESGLQDASATIGPISVAIDASSWDFQLYESGVYDVSD--CSTTELDHG 277

Query: 175 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 209
           VL+VGYG  D   YWLV+NSWG      G+ ++ R
Sbjct: 278 VLVVGYGTDDGTAYWLVKNSWGTDWGHHGYIQMSR 312



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 27/44 (61%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER 1008
            CS  +L H VL+VGYG  D   YWLV+NSWG      G+ ++ R
Sbjct: 269  CSTTELDHGVLVVGYGTDDGTAYWLVKNSWGTDWGHHGYIQMSR 312


>gi|403376395|gb|EJY88173.1| Cysteine protease-5 [Oxytricha trifallax]
          Length = 401

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 165/358 (46%), Gaps = 31/358 (8%)

Query: 604 AIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 663
           A +L+ ++ ++  VA+ L + +  ++      AR     I       N    + F  F+ 
Sbjct: 24  AKLLVGSLVVVGTVAATLLILNQNEQ------ARNPAFNINFLQESGNHETQQAFIQFVA 77

Query: 664 KRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEIL---CKTG 711
           + G+ YA    +  RF+ F ++           +KH   G ++FSD + EE L    K G
Sbjct: 78  EYGKTYATKNHLNSRFDIFAKNFEMIKSHNENEEKHYEMGINKFSDMTHEEFLEHYHKQG 137

Query: 712 --FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                 E+  E   A+R    +  M  + +   P+  DWR+       GDQ++CGSCWAF
Sbjct: 138 VLIPSEEKRLEAHHANRHPSLQA-MASDDNQAAPEKVDWREAGKVSVPGDQSSCGSCWAF 196

Query: 770 SIAGMLEGQYAIKTGKLVE-FSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYP 828
           + A  LE  +AIK     E FS   L++C +   GC G +   + E+T   GL  E+DYP
Sbjct: 197 TTATTLESLHAIKNDTKPERFSVQYLIDCDEGNFGCGGGWMLDAYEFTKTKGLLKEEDYP 256

Query: 829 YKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD--LIHDYN 886
            K     K  C   K K + +        N      + L    P+ V ++S+   +  Y 
Sbjct: 257 RK-YTMSKNSCVDVKDKQRFYNHDQKEEDNIDNDRLRKLVSIRPVGVAMHSNPRCLMSYK 315

Query: 887 GTPIRKNDETCS--PYDLGHAVLLVGYGKQDN----IPYWLVRNSWGPIGPDEGFFKI 938
              +R+ D  CS     + HAV +VGYGK DN    + YWLV+NSWGP   D+GFFK+
Sbjct: 316 NGILREEDCKCSDEKNQVNHAVTIVGYGKVDNSKDCVGYWLVKNSWGPRWGDQGFFKL 373



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 168/360 (46%), Gaps = 34/360 (9%)

Query: 238 AIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 297
           A +L+ ++ ++  VA+ L + +  ++      AR     I       N    + F  F+ 
Sbjct: 24  AKLLVGSLVVVGTVAATLLILNQNEQ------ARNPAFNINFLQESGNHETQQAFIQFVA 77

Query: 298 KRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEIL---CKTG 345
           + G+ YA    +  RF+ F ++           +KH   G ++FSD + EE L    K G
Sbjct: 78  EYGKTYATKNHLNSRFDIFAKNFEMIKSHNENEEKHYEMGINKFSDMTHEEFLEHYHKQG 137

Query: 346 --FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                 E+  E   A+R    +  M  + +   P+  DWR+       GDQ++CGSCWAF
Sbjct: 138 VLIPSEEKRLEAHHANRHPSLQA-MASDDNQAAPEKVDWREAGKVSVPGDQSSCGSCWAF 196

Query: 404 SIAGMLEGQYAIKTGKLVE-FSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDY 462
           + A  LE  +AIK     E FS   L++C +   GCGG   L+   E+T   GL  E+DY
Sbjct: 197 TTATTLESLHAIKNDTKPERFSVQYLIDCDEGNFGCGGGWMLD-AYEFTKTKGLLKEEDY 255

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH---LIHF 519
           P R     K  C   K K + +        N      + L    P+ V ++S+   L+ +
Sbjct: 256 P-RKYTMSKNSCVDVKDKQRFYNHDQKEEDNIDNDRLRKLVSIRPVGVAMHSNPRCLMSY 314

Query: 520 YNGTPIRKNDETCS--PYDLGHAVLLVGYGKQDD----IPYWLARNSWGPIGPDEGFFKI 573
            NG  +R+ D  CS     + HAV +VGYGK D+    + YWL +NSWGP   D+GFFK+
Sbjct: 315 KNGI-LREEDCKCSDEKNQVNHAVTIVGYGKVDNSKDCVGYWLVKNSWGPRWGDQGFFKL 373



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 106/214 (49%), Gaps = 10/214 (4%)

Query: 3   MEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVE-FSKS 61
           M  + +   P+  DWR+       GDQ+ CGSCWAF+ A  LE  +AIK     E FS  
Sbjct: 161 MASDDNQAAPEKVDWREAGKVSVPGDQSSCGSCWAFTTATTLESLHAIKNDTKPERFSVQ 220

Query: 62  QLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 121
            L++C +   GC G +   + E+T   GL  E+DYP K     K  C   K K + +   
Sbjct: 221 YLIDCDEGNFGCGGGWMLDAYEFTKTKGLLKEEDYPRK-YTMSKNSCVDVKDKQRFYNHD 279

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCS--PYDLGHAVLL 177
                N      + L    P+ V ++S+   +  Y    +R+ D  CS     + HAV +
Sbjct: 280 QKEEDNIDNDRLRKLVSIRPVGVAMHSNPRCLMSYKNGILREEDCKCSDEKNQVNHAVTI 339

Query: 178 VGYGKQDN----IPYWLVRNSWGPIGPDEGFFKI 207
           VGYGK DN    + YWLV+NSWGP   D+GFFK+
Sbjct: 340 VGYGKVDNSKDCVGYWLVKNSWGPRWGDQGFFKL 373



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 4/41 (9%)

Query: 970  LGHAVLLVGYGKQDD----IPYWLVRNSWGPIGPDEGFFKI 1006
            + HAV +VGYGK D+    + YWLV+NSWGP   D+GFFK+
Sbjct: 333  VNHAVTIVGYGKVDNSKDCVGYWLVKNSWGPRWGDQGFFKL 373


>gi|334265690|ref|YP_004376219.1| cathepsin [Clostera anachoreta granulovirus]
 gi|315451014|gb|ADU24593.1| cathepsin [Clostera anachoreta granulovirus]
 gi|327553705|gb|AEB00299.1| cathepsin [Clostera anachoreta granulovirus]
          Length = 332

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 158/331 (47%), Gaps = 54/331 (16%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSE 697
           SL ++ +N    F+ F+    + Y++ +E   R+E FK++           KH  +  + 
Sbjct: 17  SLKYNLDNSETLFEEFVTNFNKTYSSQDEKLIRYEIFKKNLALINNKNMESKHATFDINI 76

Query: 698 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKML------MEVEKDGP---VPDAWDW 748
           +SD    ++L +T       T  RI   +  + K +      ++V  D P   +P+ +DW
Sbjct: 77  YSDLHKNDLLHRT-------TGLRIGLKKNPLFKAITFRECGVQVIGDEPHALLPETFDW 129

Query: 749 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF 808
           R +N      DQ  CG+CWAFS  G +E  + IK G  ++ S+  LV C    +GCDG  
Sbjct: 130 RLRNGVTSVKDQLQCGACWAFSALGNIESLHKIKYGVELDLSEQHLVNCDPLNNGCDGGL 189

Query: 809 FEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 867
              ++E   ++ GL +E+D PY    G    C   K      +G           ++++L
Sbjct: 190 MHWALENILYEGGLVAERDEPYF---GYDAVCK-PKRLSSTISGCTRFVLQNENRLRELL 245

Query: 868 YKYGPLSVLLN-----------SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
              GP+SV ++           +D+ H+ NG              L HAVLLVGYG  ++
Sbjct: 246 VVNGPVSVAIDVIDVIDYKEGIADMCHNKNG--------------LNHAVLLVGYGVDND 291

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           +PYW+++NSWG    + GFF+++R  N+CGI
Sbjct: 292 VPYWILKNSWGENWGENGFFRVQRNVNSCGI 322



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 33/321 (10%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSE 331
           SL ++ +N    F+ F+    + Y++ +E   R+E FK++           KH  +  + 
Sbjct: 17  SLKYNLDNSETLFEEFVTNFNKTYSSQDEKLIRYEIFKKNLALINNKNMESKHATFDINI 76

Query: 332 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKML------MEVEKDGP---VPDAWDW 382
           +SD    ++L +T       T  RI   +  + K +      ++V  D P   +P+ +DW
Sbjct: 77  YSDLHKNDLLHRT-------TGLRIGLKKNPLFKAITFRECGVQVIGDEPHALLPETFDW 129

Query: 383 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCD 442
           R +N      DQ  CG+CWAFS  G +E  + IK G  ++ S+  LV C    +GC G  
Sbjct: 130 RLRNGVTSVKDQLQCGACWAFSALGNIESLHKIKYGVELDLSEQHLVNCDPLNNGCDGGL 189

Query: 443 GLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKIL 502
                    ++ GL +E+D PY    G    C   K      +G           ++++L
Sbjct: 190 MHWALENILYEGGLVAERDEPYF---GYDAVCK-PKRLSSTISGCTRFVLQNENRLRELL 245

Query: 503 YKYGPLSVGLNS-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
              GP+SV ++   +I +  G      D   +   L HAVLLVGYG  +D+PYW+ +NSW
Sbjct: 246 VVNGPVSVAIDVIDVIDYKEGIA----DMCHNKNGLNHAVLLVGYGVDNDVPYWILKNSW 301

Query: 562 GPIGPDEGFFKIERGNNACGI 582
           G    + GFF+++R  N+CGI
Sbjct: 302 GENWGENGFFRVQRNVNSCGI 322



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 112/223 (50%), Gaps = 30/223 (13%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           E    +P+ +DWR +N      DQ  CG+CWAFS  G +E  + IK G  ++ S+  LV 
Sbjct: 118 EPHALLPETFDWRLRNGVTSVKDQLQCGACWAFSALGNIESLHKIKYGVELDLSEQHLVN 177

Query: 66  CAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           C    +GCDG     ++E   ++ GL +E+D PY    G    C   K      +G    
Sbjct: 178 CDPLNNGCDGGLMHWALENILYEGGLVAERDEPYF---GYDAVCK-PKRLSSTISGCTRF 233

Query: 125 HFNGSETMKKILYKYGPLSVLLN-----------SDLIHDYNGTPIRKNDETCSPYDLGH 173
                  ++++L   GP+SV ++           +D+ H+ NG              L H
Sbjct: 234 VLQNENRLRELLVVNGPVSVAIDVIDVIDYKEGIADMCHNKNG--------------LNH 279

Query: 174 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           AVLLVGYG  +++PYW+++NSWG    + GFF+++R  N+CGI
Sbjct: 280 AVLLVGYGVDNDVPYWILKNSWGENWGENGFFRVQRNVNSCGI 322



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 36/46 (78%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            L HAVLLVGYG  +D+PYW+++NSWG    + GFF+++R  N+CGI
Sbjct: 277  LNHAVLLVGYGVDNDVPYWILKNSWGENWGENGFFRVQRNVNSCGI 322


>gi|226476112|emb|CAX72146.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 31/319 (9%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC+G + + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCEGGYMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSV-LLN 878
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SV ++ 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            D +  Y       ND  C   D+ H VL+VGYG +    YWL++NSWG +   +G+FK+
Sbjct: 254 LDSLIMYKSGVFESND--CKHADINHGVLVVGYGNEHGKDYWLIKNSWGDLWGSKGYFKL 311

Query: 939 ERG-NNACGIEQIAGYATI 956
            R  +N CG+   A +  +
Sbjct: 312 RRNKHNMCGVASNASFPLL 330



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR         +Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSKWDWRDHGAVTAVKNQGMCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYG +  
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVALDSLIMYKSGVFESND--CKHADINHGVLVVGYGNEHG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 290 KDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 34/321 (10%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+    G  GC+G  ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP-YGNYGCEGGYMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN 513
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG+ 
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 514 S--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           +   LI + +G     ND  C   D+ H VL+VGYG +    YWL +NSWG +   +G+F
Sbjct: 253 ALDSLIMYKSGV-FESND--CKHADINHGVLVVGYGNEHGKDYWLIKNSWGDLWGSKGYF 309

Query: 572 KIERG-NNACGIEQIAGYATI 591
           K+ R  +N CG+   A +  +
Sbjct: 310 KLRRNKHNMCGVASNASFPLL 330



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ H VL+VGYG +    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKHADINHGVLVVGYGNEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|47213724|emb|CAF95155.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 336

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 118/219 (53%), Gaps = 6/219 (2%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P   D+RKK       DQ ACGSCWAFS AG LEG  A KTGKLV+ S   LV+C K+ 
Sbjct: 121 LPRNLDYRKKGAVTAVKDQGACGSCWAFSSAGALEGMLAKKTGKLVDLSPQNLVDCVKEN 180

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
           SGCGG              GL+SE  YPY    G++  C Y ++   +   +      G+
Sbjct: 181 SGCGGGYMTNAFKYVATNKGLDSEAAYPYV---GQEQPCQYKEAGKAVECRRYEEVPQGN 237

Query: 496 E-TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIP 553
           E  +   L+K+GP+++G+++ L  F+  +     D  C+P D+ HAVLLVGYG  +    
Sbjct: 238 EKLLAYALFKHGPVAIGIDATLTTFHLYSKGVYYDPDCNPEDINHAVLLVGYGVTRRGQQ 297

Query: 554 YWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           YW+ +NSWG     EG+  + R   N CGI  +A Y  +
Sbjct: 298 YWIVKNSWGTGWGTEGYILMARNRGNLCGIANLASYPIM 336



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 120/219 (54%), Gaps = 7/219 (3%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +P   D+RKK       DQ ACGSCWAFS AG LEG  A KTGKLV+ S   LV+C K+ 
Sbjct: 121 LPRNLDYRKKGAVTAVKDQGACGSCWAFSSAGALEGMLAKKTGKLVDLSPQNLVDCVKEN 180

Query: 802 SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
           SGC G +   + +Y     GL+SE  YPY    G++  C Y ++   +   +      G+
Sbjct: 181 SGCGGGYMTNAFKYVATNKGLDSEAAYPYV---GQEQPCQYKEAGKAVECRRYEEVPQGN 237

Query: 861 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIP 918
           E  +   L+K+GP+++ +++ L   +  +     D  C+P D+ HAVLLVGYG  +    
Sbjct: 238 EKLLAYALFKHGPVAIGIDATLTTFHLYSKGVYYDPDCNPEDINHAVLLVGYGVTRRGQQ 297

Query: 919 YWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           YW+V+NSWG     EG+  + R   N CGI  +A Y  +
Sbjct: 298 YWIVKNSWGTGWGTEGYILMARNRGNLCGIANLASYPIM 336



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 119/219 (54%), Gaps = 7/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P   D+RKK       DQ  CGSCWAFS AG LEG  A KTGKLV+ S   LV+C K+ 
Sbjct: 121 LPRNLDYRKKGAVTAVKDQGACGSCWAFSSAGALEGMLAKKTGKLVDLSPQNLVDCVKEN 180

Query: 71  SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           SGC G +   + +Y     GL+SE  YPY    G++  C Y ++   +   +      G+
Sbjct: 181 SGCGGGYMTNAFKYVATNKGLDSEAAYPYV---GQEQPCQYKEAGKAVECRRYEEVPQGN 237

Query: 130 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIP 187
           E  +   L+K+GP+++ +++ L   +  +     D  C+P D+ HAVLLVGYG  +    
Sbjct: 238 EKLLAYALFKHGPVAIGIDATLTTFHLYSKGVYYDPDCNPEDINHAVLLVGYGVTRRGQQ 297

Query: 188 YWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           YW+V+NSWG     EG+  + R   N CGI  +A Y  +
Sbjct: 298 YWIVKNSWGTGWGTEGYILMARNRGNLCGIANLASYPIM 336



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 962  DETCSPYDLGHAVLLVGYG-KQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 1019
            D  C+P D+ HAVLLVGYG  +    YW+V+NSWG     EG+  + R   N CGI  +A
Sbjct: 272  DPDCNPEDINHAVLLVGYGVTRRGQQYWIVKNSWGTGWGTEGYILMARNRGNLCGIANLA 331

Query: 1020 GYATI 1024
             Y  +
Sbjct: 332  SYPIM 336


>gi|431896621|gb|ELK06033.1| Cathepsin S [Pteropus alecto]
          Length = 331

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 133/270 (49%), Gaps = 21/270 (7%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G +   D + EE++   G       ++R V  +    + L         PD+ DWR K  
Sbjct: 76  GMNHLGDMTSEEVISLMGSLTVPSQWQRNVTYKSNPNQKL---------PDSLDWRDKGC 126

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFE 810
                 Q +CGSCWAFS  G LE Q  +KTGKLV  S   LV+C+ +     GC+G F  
Sbjct: 127 VTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYSNKGCNGGFMT 186

Query: 811 PSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKIL 867
            + +Y     G++SE  YPYK  +G   KC YD SK +  T   +  L F   E +K+ +
Sbjct: 187 SAFQYIIDNNGIDSEASYPYKAQDG---KCQYD-SKFRAATCSKYTELPFGSEEALKEAV 242

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927
              GP+SV +++     +        D++C+   + H VL+VGYG  D   YWLV+NSWG
Sbjct: 243 ANKGPVSVAIDASHPSFFLYRSGVYYDQSCT-LKVNHGVLVVGYGNLDGKDYWLVKNSWG 301

Query: 928 PIGPDEGFFKIERGN-NACGIEQIAGYATI 956
               D+G+ ++ R + N CGI     Y  I
Sbjct: 302 LNFGDKGYIRMARNSGNHCGIASYPSYPEI 331



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 132/270 (48%), Gaps = 20/270 (7%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G +   D + EE++   G       ++R V  +    + L         PD+ DWR K  
Sbjct: 76  GMNHLGDMTSEEVISLMGSLTVPSQWQRNVTYKSNPNQKL---------PDSLDWRDKGC 126

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LE 445
                 Q +CGSCWAFS  G LE Q  +KTGKLV  S   LV+C+ +     GC+G  + 
Sbjct: 127 VTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYSNKGCNGGFMT 186

Query: 446 QPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKIL 502
              +Y     G++SE  YPY+  +G   KC YD SK +  T   +  L F   E +K+ +
Sbjct: 187 SAFQYIIDNNGIDSEASYPYKAQDG---KCQYD-SKFRAATCSKYTELPFGSEEALKEAV 242

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWG 562
              GP+SV +++    F+        D++C+   + H VL+VGYG  D   YWL +NSWG
Sbjct: 243 ANKGPVSVAIDASHPSFFLYRSGVYYDQSCT-LKVNHGVLVVGYGNLDGKDYWLVKNSWG 301

Query: 563 PIGPDEGFFKIERGN-NACGIEQIAGYATI 591
               D+G+ ++ R + N CGI     Y  I
Sbjct: 302 LNFGDKGYIRMARNSGNHCGIASYPSYPEI 331



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 117/222 (52%), Gaps = 12/222 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD+ DWR K        Q  CGSCWAFS  G LE Q  +KTGKLV  S   LV+C+ + 
Sbjct: 115 LPDSLDWRDKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 70  --CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--L 124
               GC+G F   + +Y     G++SE  YPYK  +G   KC YD SK +  T   +  L
Sbjct: 175 YSNKGCNGGFMTSAFQYIIDNNGIDSEASYPYKAQDG---KCQYD-SKFRAATCSKYTEL 230

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
            F   E +K+ +   GP+SV +++     +        D++C+   + H VL+VGYG  D
Sbjct: 231 PFGSEEALKEAVANKGPVSVAIDASHPSFFLYRSGVYYDQSCT-LKVNHGVLVVGYGNLD 289

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
              YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 290 GKDYWLVKNSWGLNFGDKGYIRMARNSGNHCGIASYPSYPEI 331



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAG 1020
            D++C+   + H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R + N CGI     
Sbjct: 269  DQSCT-LKVNHGVLVVGYGNLDGKDYWLVKNSWGLNFGDKGYIRMARNSGNHCGIASYPS 327

Query: 1021 YATI 1024
            Y  I
Sbjct: 328  YPEI 331


>gi|325303202|tpg|DAA34687.1| TPA_inf: cathepsin L-like cysteine proteinase B [Amblyomma
           variegatum]
          Length = 337

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 159/337 (47%), Gaps = 33/337 (9%)

Query: 276 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH---KKHERYGTS-- 330
           A+  +     E +   + AF    G++Y ++ E   R + + ++     + +E+Y  +  
Sbjct: 13  AMTAAAITHQELVGAEWSAFKALHGKEYQSETEEYYRLKIYMENRMMIARHNEKYANNKV 72

Query: 331 -------EFSDRSPEEIL-CKTGFKWSERTYER---IVADREKVEKMLMEVEKDGPVPDA 379
                  E+ D    E +  + GF+   R+  R      + E +E        D  +P  
Sbjct: 73  SYKLAMNEYGDMLHHEFVSTRNGFRRDYRSKPRQGSFYIEPEGIE--------DKHLPKT 124

Query: 380 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCG 439
            DWRKK    P  +Q  CGSCWAFS  G LEGQ+  K+G +V  S+  LV+C+    G  
Sbjct: 125 VDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKSGDMVSLSEQNLVDCST-AFGNN 183

Query: 440 GCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLYFNGS 495
           GC+G  ++   +Y     G+++EK YPY   NG    C + KS V    TG   +     
Sbjct: 184 GCEGGLMDNAFKYIKANGGIDTEKSYPY---NGTDGTCHFKKSDVGATDTGFVDIPEGNE 240

Query: 496 ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYW 555
             +KK +   GP+SV +++    F   +    ++  CS  +L H VL+VGYG +DD  YW
Sbjct: 241 HLLKKAVATVGPISVAIDASHQSFQFYSQGVYDEPECSSENLDHGVLVVGYGTKDDQDYW 300

Query: 556 LARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           L +NSWG    D G+  + R  +N CGI   A Y  +
Sbjct: 301 LVKNSWGTTWGDGGYIYMTRNKDNQCGIASSASYPLV 337



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 162/337 (48%), Gaps = 34/337 (10%)

Query: 642 AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH---KKHERYGTS-- 696
           A+  +     E +   + AF    G++Y ++ E   R + + ++     + +E+Y  +  
Sbjct: 13  AMTAAAITHQELVGAEWSAFKALHGKEYQSETEEYYRLKIYMENRMMIARHNEKYANNKV 72

Query: 697 -------EFSDRSPEEIL-CKTGFKWSERTYER---IVADREKVEKMLMEVEKDGPVPDA 745
                  E+ D    E +  + GF+   R+  R      + E +E        D  +P  
Sbjct: 73  SYKLAMNEYGDMLHHEFVSTRNGFRRDYRSKPRQGSFYIEPEGIE--------DKHLPKT 124

Query: 746 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SG 803
            DWRKK    P  +Q  CGSCWAFS  G LEGQ+  K+G +V  S+  LV+C+     +G
Sbjct: 125 VDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKSGDMVSLSEQNLVDCSTAFGNNG 184

Query: 804 CDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSE 861
           C+G   + + +Y     G+++EK YPY   NG    C + KS V   T   F+    G+E
Sbjct: 185 CEGGLMDNAFKYIKANGGIDTEKSYPY---NGTDGTCHFKKSDVGA-TDTGFVDIPEGNE 240

Query: 862 -TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
             +KK +   GP+SV +++        +    ++  CS  +L H VL+VGYG +D+  YW
Sbjct: 241 HLLKKAVATVGPISVAIDASHQSFQFYSQGVYDEPECSSENLDHGVLVVGYGTKDDQDYW 300

Query: 921 LVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           LV+NSWG    D G+  + R  +N CGI   A Y  +
Sbjct: 301 LVKNSWGTTWGDGGYIYMTRNKDNQCGIASSASYPLV 337



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 121/225 (53%), Gaps = 10/225 (4%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +D  +P   DWRKK    P  +Q  CGSCWAFS  G LEGQ+  K+G +V  S+  LV+C
Sbjct: 117 EDKHLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKSGDMVSLSEQNLVDC 176

Query: 67  AKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +     +GC+G   + + +Y     G+++EK YPY   NG    C + KS V   T   F
Sbjct: 177 STAFGNNGCEGGLMDNAFKYIKANGGIDTEKSYPY---NGTDGTCHFKKSDVGA-TDTGF 232

Query: 124 LHF-NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           +    G+E  +KK +   GP+SV +++        +    ++  CS  +L H VL+VGYG
Sbjct: 233 VDIPEGNEHLLKKAVATVGPISVAIDASHQSFQFYSQGVYDEPECSSENLDHGVLVVGYG 292

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            +D+  YWLV+NSWG    D G+  + R  +N CGI   A Y  +
Sbjct: 293 TKDDQDYWLVKNSWGTTWGDGGYIYMTRNKDNQCGIASSASYPLV 337



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 16/109 (14%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  I  GN     + +A    I V               V ++  CS  +L H VL+
Sbjct: 229  DTGFVDIPEGNEHLLKKAVATVGPISVAIDASHQSFQFYSQGVYDEPECSSENLDHGVLV 288

Query: 977  VGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG +DD  YWLV+NSWG    D G+  + R  +N CGI   A Y  +
Sbjct: 289  VGYGTKDDQDYWLVKNSWGTTWGDGGYIYMTRNKDNQCGIASSASYPLV 337


>gi|75765285|pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abe854
 gi|75765286|pdb|1U9W|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abi491
 gi|75765287|pdb|1U9X|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abj688
 gi|160286063|pdb|2R6N|A Chain A, Crystal Structure Of A Pyrrolopyrimidine Inhibitor In
           Complex With Human Cathepsin K
          Length = 217

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 120/220 (54%), Gaps = 6/220 (2%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  
Sbjct: 1   GRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS 60

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHF 126
           +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +  
Sbjct: 61  ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPE 117

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
              + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q   
Sbjct: 118 GNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGN 177

Query: 187 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 178 KHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 217



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 120/220 (54%), Gaps = 6/220 (2%)

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
           G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  
Sbjct: 1   GRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS 60

Query: 800 QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHF 857
           +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +  
Sbjct: 61  ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPE 117

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 917
              + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q   
Sbjct: 118 GNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGN 177

Query: 918 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
            +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 178 KHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 217



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 120/221 (54%), Gaps = 7/221 (3%)

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
           G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  
Sbjct: 1   GRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS 60

Query: 434 QCSGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLY 491
           +  GCGG   +    +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 61  ENDGCGG-GYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 116

Query: 492 FNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
               + +K+ + + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q  
Sbjct: 117 EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG 176

Query: 552 IPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
             +W+ +NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 177 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 217



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 154  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 213

Query: 1021 YATI 1024
            +  +
Sbjct: 214  FPKM 217


>gi|255088003|ref|XP_002505924.1| cysteine endopeptidase [Micromonas sp. RCC299]
 gi|226521195|gb|ACO67182.1| cysteine endopeptidase [Micromonas sp. RCC299]
          Length = 291

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 141/288 (48%), Gaps = 29/288 (10%)

Query: 683 KQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV 742
           +Q   +    +G ++FSD +P E    + F  ++   E + A R  +  +      D  +
Sbjct: 7   RQAQDRGSAVHGVTQFSDLTPTEF--ASTFLGTKLANEDVAAIRSGMTTLPDYPAHD--L 62

Query: 743 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 802
           P  +DWR++    P  +Q ACGSCW FS  G +EG   +KTG+LV  S+ QLV+C   C 
Sbjct: 63  PLEFDWRERGAVTPVKNQGACGSCWTFSATGAVEGANFLKTGELVSLSEQQLVDCDHTCD 122

Query: 803 ---------GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 853
                    GC+G     ++ Y  + GL++E +YPYK  +G   KCA  +      +   
Sbjct: 123 PSAPRNCDYGCNGGLPLNAMRYVQKHGLDTESNYPYKGVDG---KCASARHGPAAASVSS 179

Query: 854 FLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 912
           F   + +ET +   L K+GPLS+ +++  +  Y G         C+   L H VL+VGYG
Sbjct: 180 FNLVSTNETQIAAALLKHGPLSIGIDAAWMQTYVGG--VACPWICNKAGLDHGVLIVGYG 237

Query: 913 KQDNIP---------YWLVRNSWGP-IGPDEGFFKIERGNNACGIEQI 950
                P         YW+V+NSWGP  G + G++ I +   ACG+  +
Sbjct: 238 VNGTAPARPWHRRQDYWIVKNSWGPNWGVEGGYYHICKDRAACGLNTM 285



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 141/290 (48%), Gaps = 32/290 (11%)

Query: 317 KQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV 376
           +Q   +    +G ++FSD +P E    + F  ++   E + A R  +  +      D  +
Sbjct: 7   RQAQDRGSAVHGVTQFSDLTPTEF--ASTFLGTKLANEDVAAIRSGMTTLPDYPAHD--L 62

Query: 377 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 436
           P  +DWR++    P  +Q ACGSCW FS  G +EG   +KTG+LV  S+ QLV+C   C 
Sbjct: 63  PLEFDWRERGAVTPVKNQGACGSCWTFSATGAVEGANFLKTGELVSLSEQQLVDCDHTCD 122

Query: 437 ---------GCGGCDGLE-QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTG 486
                    GC G  GL    + Y  + GL++E +YPY+  +G   KCA  +      + 
Sbjct: 123 PSAPRNCDYGCNG--GLPLNAMRYVQKHGLDTESNYPYKGVDG---KCASARHGPAAASV 177

Query: 487 KDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVG 545
             F   + +ET +   L K+GPLS+G+++  +  Y G         C+   L H VL+VG
Sbjct: 178 SSFNLVSTNETQIAAALLKHGPLSIGIDAAWMQTYVGG--VACPWICNKAGLDHGVLIVG 235

Query: 546 YGKQDDIP---------YWLARNSWGP-IGPDEGFFKIERGNNACGIEQI 585
           YG     P         YW+ +NSWGP  G + G++ I +   ACG+  +
Sbjct: 236 YGVNGTAPARPWHRRQDYWIVKNSWGPNWGVEGGYYHICKDRAACGLNTM 285



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 116/229 (50%), Gaps = 25/229 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR++    P  +Q  CGSCW FS  G +EG   +KTG+LV  S+ QLV+C   C
Sbjct: 62  LPLEFDWRERGAVTPVKNQGACGSCWTFSATGAVEGANFLKTGELVSLSEQQLVDCDHTC 121

Query: 71  S---------GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 121
                     GC+G     ++ Y  + GL++E +YPYK  +G   KCA  +      +  
Sbjct: 122 DPSAPRNCDYGCNGGLPLNAMRYVQKHGLDTESNYPYKGVDG---KCASARHGPAAASVS 178

Query: 122 DFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
            F   + +ET +   L K+GPLS+ +++  +  Y G         C+   L H VL+VGY
Sbjct: 179 SFNLVSTNETQIAAALLKHGPLSIGIDAAWMQTYVGG--VACPWICNKAGLDHGVLIVGY 236

Query: 181 GKQDNIP---------YWLVRNSWGP-IGPDEGFFKIERGNNACGIEQI 219
           G     P         YW+V+NSWGP  G + G++ I +   ACG+  +
Sbjct: 237 GVNGTAPARPWHRRQDYWIVKNSWGPNWGVEGGYYHICKDRAACGLNTM 285


>gi|334314327|ref|XP_001368532.2| PREDICTED: cathepsin H-like [Monodelphis domestica]
          Length = 344

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/229 (37%), Positives = 120/229 (52%), Gaps = 17/229 (7%)

Query: 735 EVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 793
            V + GP PD  DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL+  ++ Q
Sbjct: 118 HVRRVGPYPDFMDWRKKGNYVSPVKNQGGCGSCWTFSTTGGLESAVAIATGKLLSLAEQQ 177

Query: 794 LVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 850
           LV+CA+  +  GC+G     + EY  +  G+  E  YPY+  +G    C +   K   F 
Sbjct: 178 LVDCAQAFNNHGCNGGLPSQAFEYIMYNNGIMGEDTYPYEGKDG---TCRFKPDKAIAFV 234

Query: 851 GKDFLHFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGH 904
            KD ++      E M + +  + P+S    +  D +   +G     ++  C  SP  + H
Sbjct: 235 -KDVVNITIYDEEAMTEAVAHHNPVSFAFEVTEDFMSYRDGI---YSNPRCDKSPDKVNH 290

Query: 905 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
           AVL VGYGK + I YW+V+NSWG    + G+F IERG N CG+   A Y
Sbjct: 291 AVLAVGYGKNNGILYWIVKNSWGTSWGNNGYFLIERGKNMCGLADCASY 339



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/229 (37%), Positives = 120/229 (52%), Gaps = 17/229 (7%)

Query: 4   EVEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 62
            V + GP PD  DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL+  ++ Q
Sbjct: 118 HVRRVGPYPDFMDWRKKGNYVSPVKNQGGCGSCWTFSTTGGLESAVAIATGKLLSLAEQQ 177

Query: 63  LVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 119
           LV+CA+  +  GC+G     + EY  +  G+  E  YPY+  +G    C +   K   F 
Sbjct: 178 LVDCAQAFNNHGCNGGLPSQAFEYIMYNNGIMGEDTYPYEGKDG---TCRFKPDKAIAFV 234

Query: 120 GKDFLHFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGH 173
            KD ++      E M + +  + P+S    +  D +   +G     ++  C  SP  + H
Sbjct: 235 -KDVVNITIYDEEAMTEAVAHHNPVSFAFEVTEDFMSYRDGI---YSNPRCDKSPDKVNH 290

Query: 174 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           AVL VGYGK + I YW+V+NSWG    + G+F IERG N CG+   A Y
Sbjct: 291 AVLAVGYGKNNGILYWIVKNSWGTSWGNNGYFLIERGKNMCGLADCASY 339



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 116/229 (50%), Gaps = 16/229 (6%)

Query: 369 EVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQ 427
            V + GP PD  DWRKK N   P  +Q  CGSCW FS  G LE   AI TGKL+  ++ Q
Sbjct: 118 HVRRVGPYPDFMDWRKKGNYVSPVKNQGGCGSCWTFSTTGGLESAVAIATGKLLSLAEQQ 177

Query: 428 LVECAKQCSGCGGCDGL-EQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFT 485
           LV+CA+  +  G   GL  Q  EY  +  G+  E  YPY   +G    C +   K   F 
Sbjct: 178 LVDCAQAFNNHGCNGGLPSQAFEYIMYNNGIMGEDTYPYEGKDG---TCRFKPDKAIAFV 234

Query: 486 GKDFLYFN--GSETMKKILYKYGPLSVG--LNSHLIHFYNGTPIRKNDETC--SPYDLGH 539
            KD +       E M + +  + P+S    +    + + +G     ++  C  SP  + H
Sbjct: 235 -KDVVNITIYDEEAMTEAVAHHNPVSFAFEVTEDFMSYRDGI---YSNPRCDKSPDKVNH 290

Query: 540 AVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
           AVL VGYGK + I YW+ +NSWG    + G+F IERG N CG+   A Y
Sbjct: 291 AVLAVGYGKNNGILYWIVKNSWGTSWGNNGYFLIERGKNMCGLADCASY 339



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 37/56 (66%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            SP  + HAVL VGYGK + I YW+V+NSWG    + G+F IERG N CG+   A Y
Sbjct: 284  SPDKVNHAVLAVGYGKNNGILYWIVKNSWGTSWGNNGYFLIERGKNMCGLADCASY 339


>gi|156397875|ref|XP_001637915.1| predicted protein [Nematostella vectensis]
 gi|156225031|gb|EDO45852.1| predicted protein [Nematostella vectensis]
          Length = 331

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 121/222 (54%), Gaps = 12/222 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           V D+ DWR K    P  +Q  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+ + 
Sbjct: 115 VVDSIDWRSKGYVTPVKNQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSGKY 174

Query: 70  -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHF 126
             +GC+G   + + +Y  +  G+++EK YPY   +G    C Y+KS +    TG   +  
Sbjct: 175 GNNGCEGGLMDNAFQYIKENGGIDTEKSYPYLAKDG---VCHYNKSAIGAKDTGFVDIPT 231

Query: 127 NGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
                +++ L   GP+S+ +++     H Y+      +D  CS   L H VL VGYG  D
Sbjct: 232 GDENALQQALASVGPISIAIDASQSTFHFYHQGVY--DDPDCSSTRLDHGVLAVGYGTDD 289

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
              YWLV+NSWGP   +EG+ KI R + + CG+   A Y  +
Sbjct: 290 GKDYWLVKNSWGPSWGEEGYIKIARNDHDKCGVASKASYPLV 331



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 121/222 (54%), Gaps = 12/222 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
           V D+ DWR K    P  +Q  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+ + 
Sbjct: 115 VVDSIDWRSKGYVTPVKNQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSGKY 174

Query: 801 -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHF 857
             +GC+G   + + +Y  +  G+++EK YPY   +G    C Y+KS +    TG   +  
Sbjct: 175 GNNGCEGGLMDNAFQYIKENGGIDTEKSYPYLAKDG---VCHYNKSAIGAKDTGFVDIPT 231

Query: 858 NGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 915
                +++ L   GP+S+ +++     H Y+      +D  CS   L H VL VGYG  D
Sbjct: 232 GDENALQQALASVGPISIAIDASQSTFHFYHQGVY--DDPDCSSTRLDHGVLAVGYGTDD 289

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
              YWLV+NSWGP   +EG+ KI R + + CG+   A Y  +
Sbjct: 290 GKDYWLVKNSWGPSWGEEGYIKIARNDHDKCGVASKASYPLV 331



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 121/223 (54%), Gaps = 13/223 (5%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           V D+ DWR K    P  +Q  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+ + 
Sbjct: 115 VVDSIDWRSKGYVTPVKNQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSGK- 173

Query: 436 SGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLY 491
            G  GC+G  ++   +Y  +  G+++EK YPY   +G    C Y+KS +    TG   + 
Sbjct: 174 YGNNGCEGGLMDNAFQYIKENGGIDTEKSYPYLAKDG---VCHYNKSAIGAKDTGFVDIP 230

Query: 492 FNGSETMKKILYKYGPLSVGLNS--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
                 +++ L   GP+S+ +++     HFY+      +D  CS   L H VL VGYG  
Sbjct: 231 TGDENALQQALASVGPISIAIDASQSTFHFYHQGVY--DDPDCSSTRLDHGVLAVGYGTD 288

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           D   YWL +NSWGP   +EG+ KI R + + CG+   A Y  +
Sbjct: 289 DGKDYWLVKNSWGPSWGEEGYIKIARNDHDKCGVASKASYPLV 331



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 16/109 (14%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  I  G+     + +A    I +               V +D  CS   L H VL 
Sbjct: 223  DTGFVDIPTGDENALQQALASVGPISIAIDASQSTFHFYHQGVYDDPDCSSTRLDHGVLA 282

Query: 977  VGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
            VGYG  D   YWLV+NSWGP   +EG+ KI R + + CG+   A Y  +
Sbjct: 283  VGYGTDDGKDYWLVKNSWGPSWGEEGYIKIARNDHDKCGVASKASYPLV 331


>gi|226476102|emb|CAX72141.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 156/319 (48%), Gaps = 31/319 (9%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC G F + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGGGFMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSV-LLN 878
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SV ++ 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            D +  Y       ND  C   D+ H VL+VGYG +    YWL++NSWG +   +G+FK+
Sbjct: 254 LDSLTMYKSGVFESND--CKYGDINHGVLVVGYGNEHGKDYWLIKNSWGDLWGSKGYFKL 311

Query: 939 ERG-NNACGIEQIAGYATI 956
            R  +N CG+   A +  +
Sbjct: 312 RRNKHNMCGVASNASFPLL 330



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 115/221 (52%), Gaps = 10/221 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR         +Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSKWDWRDHGAVTAVKNQGMCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYG +  
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESND--CKYGDINHGVLVVGYGNEHG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 290 KDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 155/320 (48%), Gaps = 32/320 (10%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGGCDGLEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GCGG   ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCGG-GFMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN 513
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG+ 
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 514 S-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           +   +  Y       ND  C   D+ H VL+VGYG +    YWL +NSWG +   +G+FK
Sbjct: 253 ALDSLTMYKSGVFESND--CKYGDINHGVLVVGYGNEHGKDYWLIKNSWGDLWGSKGYFK 310

Query: 573 IERG-NNACGIEQIAGYATI 591
           + R  +N CG+   A +  +
Sbjct: 311 LRRNKHNMCGVASNASFPLL 330



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ H VL+VGYG +    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKYGDINHGVLVVGYGNEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|121531600|gb|ABM55485.1| digestive cysteine protease intestain [Leptinotarsa decemlineata]
          Length = 326

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 147/318 (46%), Gaps = 36/318 (11%)

Query: 294 AFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---RY---------GTSEFSDRSPEEIL 341
           AF    G+ Y N  E K RF  F+++  K  E   RY         G + F+D + EE  
Sbjct: 25  AFKQTHGKTYKNLLEEKTRFGIFQRNLIKIKEHNARYDKGEETYLLGVTRFADLTHEEF- 83

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
                   +   +  + ++ ++        +D  VPD+ DW +K       DQ  CGSCW
Sbjct: 84  --------KDILKGQIKNKPRLNATPTVFPEDLEVPDSIDWTEKGAVLEVKDQNPCGSCW 135

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCD---GLEQPIEYTHQAGLES 458
           AFS  G LEGQ AI     +  S+ QL++C+    G G C     +    EY    G++S
Sbjct: 136 AFSATGALEGQNAILNNVKISLSEQQLLDCS-AAYGNGNCKEGGDMSAAFEYVRDYGIQS 194

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           EK YPY     E   C YD SK  L            E ++K +   GP+S+ +NS  + 
Sbjct: 195 EKSYPYIRKQTE---CQYDASKTILKIKGYKNVTTSEEGLRKAVGAIGPISIAMNSDPLQ 251

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD----DIPYWLARNSWGPIGPDEGFFKIE 574
            Y    I  + + CS +DL H VL+VGYGK      +  +W  +NSWG I  + G+F+I+
Sbjct: 252 LYYSGII--SGKGCS-HDLDHGVLVVGYGKASQWSGETKFWRVKNSWGKIWGENGYFRIK 308

Query: 575 R-GNNACGIEQIAGYATI 591
           R  NN CGI     Y  +
Sbjct: 309 RDANNLCGIADDPTYPVL 326



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 152/318 (47%), Gaps = 37/318 (11%)

Query: 660 AFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---RY---------GTSEFSDRSPEEIL 707
           AF    G+ Y N  E K RF  F+++  K  E   RY         G + F+D + EE  
Sbjct: 25  AFKQTHGKTYKNLLEEKTRFGIFQRNLIKIKEHNARYDKGEETYLLGVTRFADLTHEEF- 83

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
                   +   +  + ++ ++        +D  VPD+ DW +K       DQ  CGSCW
Sbjct: 84  --------KDILKGQIKNKPRLNATPTVFPEDLEVPDSIDWTEKGAVLEVKDQNPCGSCW 135

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGC-DGCFFEPSIEYTHQAGLESE 824
           AFS  G LEGQ AI     +  S+ QL++C  A     C +G     + EY    G++SE
Sbjct: 136 AFSATGALEGQNAILNNVKISLSEQQLLDCSAAYGNGNCKEGGDMSAAFEYVRDYGIQSE 195

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIH 883
           K YPY     E   C YD SK  +   K + +   SE  ++K +   GP+S+ +NSD + 
Sbjct: 196 KSYPYIRKQTE---CQYDASKT-ILKIKGYKNVTTSEEGLRKAVGAIGPISIAMNSDPLQ 251

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN----IPYWLVRNSWGPIGPDEGFFKIE 939
            Y    I  + + CS +DL H VL+VGYGK         +W V+NSWG I  + G+F+I+
Sbjct: 252 LYYSGII--SGKGCS-HDLDHGVLVVGYGKASQWSGETKFWRVKNSWGKIWGENGYFRIK 308

Query: 940 R-GNNACGIEQIAGYATI 956
           R  NN CGI     Y  +
Sbjct: 309 RDANNLCGIADDPTYPVL 326



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 119/228 (52%), Gaps = 16/228 (7%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +D  VPD+ DW +K       DQ  CGSCWAFS  G LEGQ AI     +  S+ QL++C
Sbjct: 106 EDLEVPDSIDWTEKGAVLEVKDQNPCGSCWAFSATGALEGQNAILNNVKISLSEQQLLDC 165

Query: 67  --AKQCSGC-DGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
             A     C +G     + EY    G++SEK YPY     E   C YD SK  +   K +
Sbjct: 166 SAAYGNGNCKEGGDMSAAFEYVRDYGIQSEKSYPYIRKQTE---CQYDASKT-ILKIKGY 221

Query: 124 LHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            +   SE  ++K +   GP+S+ +NSD +  Y    I  + + CS +DL H VL+VGYGK
Sbjct: 222 KNVTTSEEGLRKAVGAIGPISIAMNSDPLQLYYSGII--SGKGCS-HDLDHGVLVVGYGK 278

Query: 183 QDN----IPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
                    +W V+NSWG I  + G+F+I+R  NN CGI     Y  +
Sbjct: 279 ASQWSGETKFWRVKNSWGKIWGENGYFRIKRDANNLCGIADDPTYPVL 326



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 965  CSPYDLGHAVLLVGYGKQD----DIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIA 1019
            CS +DL H VL+VGYGK      +  +W V+NSWG I  + G+F+I+R  NN CGI    
Sbjct: 263  CS-HDLDHGVLVVGYGKASQWSGETKFWRVKNSWGKIWGENGYFRIKRDANNLCGIADDP 321

Query: 1020 GYATI 1024
             Y  +
Sbjct: 322  TYPVL 326


>gi|28971813|dbj|BAC65418.1| cathepsin L [Pandalus borealis]
          Length = 318

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 141/292 (48%), Gaps = 31/292 (10%)

Query: 673 EEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK 731
           EE  ERF         K  R+G     D + EE + + TG    ERT  ++ A   +VE+
Sbjct: 50  EEHNERFRQGLVTFDLKMNRFG-----DMTTEEFVSQMTGLNKVERTVGKVFAHYPEVER 104

Query: 732 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 791
                       D  DWR K    P  DQ  CGSCWAFS  G LEG + +K G LV  S+
Sbjct: 105 -----------ADTVDWRDKGAVTPVKDQGQCGSCWAFSTTGALEGAHFLKHGDLVSLSE 153

Query: 792 SQLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLF 849
             LV+C+ + SGC+G   + + +Y     G+++E  YPY+    +   C +D + V    
Sbjct: 154 QNLVDCSTENSGCNGGVVQWAYDYIKSNNGIDTESSYPYE---AQDLTCRFDAAHVGATV 210

Query: 850 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETCSPYDLGHA 905
           TG   + +    T    ++  GP+SV +++     +N   +  +    +  C+P  + HA
Sbjct: 211 TGYADIPYADEVTQASAVHDDGPVSVCIDA----GHNSFQLYSSGVYYEPNCNPSSINHA 266

Query: 906 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           VL VGYG ++   YWL++NSWG      G+ K+ R  +N CG+   + Y  +
Sbjct: 267 VLPVGYGTEEGSDYWLIKNSWGTGWGLSGYMKLTRNKSNHCGVATQSCYPNV 318



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 137/290 (47%), Gaps = 26/290 (8%)

Query: 307 EEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK 365
           EE  ERF         K  R+G     D + EE + + TG    ERT  ++ A   +VE+
Sbjct: 50  EEHNERFRQGLVTFDLKMNRFG-----DMTTEEFVSQMTGLNKVERTVGKVFAHYPEVER 104

Query: 366 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 425
                       D  DWR K    P  DQ  CGSCWAFS  G LEG + +K G LV  S+
Sbjct: 105 -----------ADTVDWRDKGAVTPVKDQGQCGSCWAFSTTGALEGAHFLKHGDLVSLSE 153

Query: 426 SQLVECAKQCSGCGGCDGLEQ-PIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKV-K 482
             LV+C+ + SGC G  G+ Q   +Y     G+++E  YPY     +   C +D + V  
Sbjct: 154 QNLVDCSTENSGCNG--GVVQWAYDYIKSNNGIDTESSYPYE---AQDLTCRFDAAHVGA 208

Query: 483 LFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVL 542
             TG   + +    T    ++  GP+SV +++    F   +     +  C+P  + HAVL
Sbjct: 209 TVTGYADIPYADEVTQASAVHDDGPVSVCIDAGHNSFQLYSSGVYYEPNCNPSSINHAVL 268

Query: 543 LVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
            VGYG ++   YWL +NSWG      G+ K+ R  +N CG+   + Y  +
Sbjct: 269 PVGYGTEEGSDYWLIKNSWGTGWGLSGYMKLTRNKSNHCGVATQSCYPNV 318



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 118/229 (51%), Gaps = 18/229 (7%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           EVE+     D  DWR K    P  DQ  CGSCWAFS  G LEG + +K G LV  S+  L
Sbjct: 101 EVER----ADTVDWRDKGAVTPVKDQGQCGSCWAFSTTGALEGAHFLKHGDLVSLSEQNL 156

Query: 64  VECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK 121
           V+C+ + SGC+G   + + +Y     G+++E  YPY+    +   C +D + V    TG 
Sbjct: 157 VDCSTENSGCNGGVVQWAYDYIKSNNGIDTESSYPYE---AQDLTCRFDAAHVGATVTGY 213

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETCSPYDLGHAVLL 177
             + +    T    ++  GP+SV +++     +N   +  +    +  C+P  + HAVL 
Sbjct: 214 ADIPYADEVTQASAVHDDGPVSVCIDA----GHNSFQLYSSGVYYEPNCNPSSINHAVLP 269

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           VGYG ++   YWL++NSWG      G+ K+ R  +N CG+   + Y  +
Sbjct: 270 VGYGTEEGSDYWLIKNSWGTGWGLSGYMKLTRNKSNHCGVATQSCYPNV 318


>gi|401416322|ref|XP_003872656.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488880|emb|CBZ24130.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 366

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 137/301 (45%), Gaps = 22/301 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C     GC G     + ++  Q     L +E  
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCSGGLMLQAFDWLLQNTNGHLYTEDS 213

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+ + S++ +    D     GS  + M   L K GP+++ L++     
Sbjct: 214 YPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 272

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 273 YKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 328

Query: 945 C 945
           C
Sbjct: 329 C 329



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 139/302 (46%), Gaps = 23/302 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C     GC G   L Q  ++  Q     L +E 
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCSGGLML-QAFDWLLQNTNGHLYTED 212

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+ + S++ +    D     GS  + M   L K GP+++ L++    
Sbjct: 213 SYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 271

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 272 SYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 327

Query: 579 AC 580
           AC
Sbjct: 328 AC 329



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMN 185

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            GC G     + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     
Sbjct: 186 DGCSGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLI 244

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C    L H VLLVGY     
Sbjct: 245 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGE 300

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 301 VPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|334324659|ref|XP_001371004.2| PREDICTED: cathepsin K-like [Monodelphis domestica]
          Length = 332

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +   R +    L   + +   PD+ D+RKK   
Sbjct: 79  NHLGDMTSEEVVQKMTGLK--------VPLSRSQNNDTLYFPDWETKTPDSIDYRKKGYV 130

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 131 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 190

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    GE   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 191 YVQKNRGIDSEDAYPYI---GEDESCMYNPTGKAAKCRGYREIPEGSEKALKRAVARVGP 247

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           ++V +++ L      +     DE C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 248 VAVAIDASLSSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQRGTKHWIIKNSWGEQWGN 307

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 308 KGYILMARNKNNACGIANLASFPKM 332



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 134/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +   R +    L   + +   PD+ D+RKK   
Sbjct: 79  NHLGDMTSEEVVQKMTGLK--------VPLSRSQNNDTLYFPDWETKTPDSIDYRKKGYV 130

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 131 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 189

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    GE   C Y+ + K     G   +     + +K+ + + G
Sbjct: 190 QYVQKNRGIDSEDAYPYI---GEDESCMYNPTGKAAKCRGYREIPEGSEKALKRAVARVG 246

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P++V +++ L  F   +     DE C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 247 PVAVAIDASLSSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQRGTKHWIIKNSWGEQWG 306

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 307 NKGYILMARNKNNACGIANLASFPKM 332



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  + 
Sbjct: 118 TPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 177

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 128
            GC G +   + +Y  +  G++SE  YPY    GE   C Y+ + K     G   +    
Sbjct: 178 DGCGGGYMTNAFQYVQKNRGIDSEDAYPYI---GEDESCMYNPTGKAAKCRGYREIPEGS 234

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +K+ + + GP++V +++ L      +     DE C+  +L HAVL VGYG Q    +
Sbjct: 235 EKALKRAVARVGPVAVAIDASLSSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQRGTKH 294

Query: 189 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 295 WIIKNSWGEQWGNKGYILMARNKNNACGIANLASFPKM 332



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 269  DENCNSDNLNHAVLAVGYGIQRGTKHWIIKNSWGEQWGNKGYILMARNKNNACGIANLAS 328

Query: 1021 YATI 1024
            +  +
Sbjct: 329  FPKM 332


>gi|5853329|gb|AAD54424.1|AF182079_1 thiol protease [Matricaria chamomilla]
          Length = 501

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 129/266 (48%), Gaps = 20/266 (7%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREK------VEKMLMEVEKDGPVPDAWD 747
           G ++F+D S EE      FK  E    ++   R        V++ +    +    P + D
Sbjct: 97  GLNKFADLSNEE------FK--EMYMSKVKGSRSNELKMGGVKRNMSVSSRTCDAPTSLD 148

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGC 807
           WR K V  P  DQ  CGSCWAFS++G +E   AI TG L+  S+ +LV+C     GCDG 
Sbjct: 149 WRDKGVVTPMKDQGQCGSCWAFSVSGSIESANAIATGDLIRLSEQELVDCDTYDYGCDGG 208

Query: 808 FFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI 866
             + +  +     GL+SE DYPY ++NG   KC   KS   + +   ++    +E     
Sbjct: 209 NMDTAYRWIIKNGGLDSEDDYPYTSSNGRDGKCDKTKSAKSVVSLDSYVEVESNEDAVLC 268

Query: 867 LYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNS 925
                P+++ ++ S          +     +  PYD+ HAVL+VGYG QD   YW+V+NS
Sbjct: 269 AVATTPVTIGIVGSAYDFQLYTGGVYNGQCSSKPYDIDHAVLIVGYGSQDGKDYWIVKNS 328

Query: 926 WGPIGPDEGFFKIERG----NNACGI 947
           WG     EG+  +ER     N  CG+
Sbjct: 329 WGTYWGLEGYILMERNTDIKNGVCGM 354



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 109/212 (51%), Gaps = 6/212 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P + DWR K V  P  DQ  CGSCWAFS++G +E   AI TG L+  S+ +LV+C    
Sbjct: 143 APTSLDWRDKGVVTPMKDQGQCGSCWAFSVSGSIESANAIATGDLIRLSEQELVDCDTYD 202

Query: 71  SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GCDG   + +  +     GL+SE DYPY ++NG   KC   KS   + +   ++    +
Sbjct: 203 YGCDGGNMDTAYRWIIKNGGLDSEDDYPYTSSNGRDGKCDKTKSAKSVVSLDSYVEVESN 262

Query: 130 ETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
           E          P+++ ++ S          +     +  PYD+ HAVL+VGYG QD   Y
Sbjct: 263 EDAVLCAVATTPVTIGIVGSAYDFQLYTGGVYNGQCSSKPYDIDHAVLIVGYGSQDGKDY 322

Query: 189 WLVRNSWGPIGPDEGFFKIERG----NNACGI 216
           W+V+NSWG     EG+  +ER     N  CG+
Sbjct: 323 WIVKNSWGTYWGLEGYILMERNTDIKNGVCGM 354



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 128/267 (47%), Gaps = 21/267 (7%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREK------VEKMLMEVEKDGPVPDAWD 381
           G ++F+D S EE      FK  E    ++   R        V++ +    +    P + D
Sbjct: 97  GLNKFADLSNEE------FK--EMYMSKVKGSRSNELKMGGVKRNMSVSSRTCDAPTSLD 148

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGC 441
           WR K V  P  DQ  CGSCWAFS++G +E   AI TG L+  S+ +LV+C     GC G 
Sbjct: 149 WRDKGVVTPMKDQGQCGSCWAFSVSGSIESANAIATGDLIRLSEQELVDCDTYDYGCDGG 208

Query: 442 DGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKI 501
           +            GL+SE DYPY + NG   KC   KS   + +   ++    +E     
Sbjct: 209 NMDTAYRWIIKNGGLDSEDDYPYTSSNGRDGKCDKTKSAKSVVSLDSYVEVESNEDAVLC 268

Query: 502 LYKYGPLSVGL--NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARN 559
                P+++G+  +++    Y G  +     +  PYD+ HAVL+VGYG QD   YW+ +N
Sbjct: 269 AVATTPVTIGIVGSAYDFQLYTGG-VYNGQCSSKPYDIDHAVLIVGYGSQDGKDYWIVKN 327

Query: 560 SWGPIGPDEGFFKIERG----NNACGI 582
           SWG     EG+  +ER     N  CG+
Sbjct: 328 SWGTYWGLEGYILMERNTDIKNGVCGM 354



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 4/53 (7%)

Query: 967  PYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG----NNACGI 1015
            PYD+ HAVL+VGYG QD   YW+V+NSWG     EG+  +ER     N  CG+
Sbjct: 302  PYDIDHAVLIVGYGSQDGKDYWIVKNSWGTYWGLEGYILMERNTDIKNGVCGM 354


>gi|1272388|gb|AAB17051.1| cysteine protease, partial [Spirometra mansonoides]
          Length = 216

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 124/222 (55%), Gaps = 13/222 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD+ +W +K       +Q  CGSCW+FS  G +EG   IK G L   S+ QLV+C+ + 
Sbjct: 1   LPDSVNWHEKGAVTSVKNQGQCGSCWSFSANGAIEGAIQIKMGILPTLSEQQLVDCSWEY 60

Query: 70  -CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFN 127
              GC+G F   + +Y  + G+E+E DY Y   +G    C Y +  V    TG   L   
Sbjct: 61  GNQGCNGGFMSLAFQYAQRYGVEAEVDYRYTAKDG---FCRYQQDMVVANVTGYAELPQG 117

Query: 128 GSETMKKILYKYGPLSVLLNSD---LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
              ++++ +   GP+SV ++++    +   +G  + K   TCSP D+ H VL++GYG ++
Sbjct: 118 DEASLQRAVAVIGPISVGIDANDPGFMSYSHGVFVSK---TCSPDDINHGVLVIGYGTEN 174

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           + PYWLV+NSWG    ++G+ K+ R  NN CGI  +A Y T+
Sbjct: 175 DEPYWLVKNSWGRSWGEQGYVKMARNKNNMCGIASVASYPTV 216



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 124/222 (55%), Gaps = 13/222 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
           +PD+ +W +K       +Q  CGSCW+FS  G +EG   IK G L   S+ QLV+C+ + 
Sbjct: 1   LPDSVNWHEKGAVTSVKNQGQCGSCWSFSANGAIEGAIQIKMGILPTLSEQQLVDCSWEY 60

Query: 801 -CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFN 858
              GC+G F   + +Y  + G+E+E DY Y   +G    C Y +  V    TG   L   
Sbjct: 61  GNQGCNGGFMSLAFQYAQRYGVEAEVDYRYTAKDG---FCRYQQDMVVANVTGYAELPQG 117

Query: 859 GSETMKKILYKYGPLSVLLNSD---LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 915
              ++++ +   GP+SV ++++    +   +G  + K   TCSP D+ H VL++GYG ++
Sbjct: 118 DEASLQRAVAVIGPISVGIDANDPGFMSYSHGVFVSK---TCSPDDINHGVLVIGYGTEN 174

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           + PYWLV+NSWG    ++G+ K+ R  NN CGI  +A Y T+
Sbjct: 175 DEPYWLVKNSWGRSWGEQGYVKMARNKNNMCGIASVASYPTV 216



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 125/223 (56%), Gaps = 14/223 (6%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +PD+ +W +K       +Q  CGSCW+FS  G +EG   IK G L   S+ QLV+C+ + 
Sbjct: 1   LPDSVNWHEKGAVTSVKNQGQCGSCWSFSANGAIEGAIQIKMGILPTLSEQQLVDCSWE- 59

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYF 492
            G  GC+G  +    +Y  + G+E+E DY Y   +G    C Y +  V    TG   L  
Sbjct: 60  YGNQGCNGGFMSLAFQYAQRYGVEAEVDYRYTAKDG---FCRYQQDMVVANVTGYAELPQ 116

Query: 493 NGSETMKKILYKYGPLSVGLNSH---LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
               ++++ +   GP+SVG++++    + + +G  + K   TCSP D+ H VL++GYG +
Sbjct: 117 GDEASLQRAVAVIGPISVGIDANDPGFMSYSHGVFVSK---TCSPDDINHGVLVIGYGTE 173

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           +D PYWL +NSWG    ++G+ K+ R  NN CGI  +A Y T+
Sbjct: 174 NDEPYWLVKNSWGRSWGEQGYVKMARNKNNMCGIASVASYPTV 216



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)

Query: 963  ETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 1021
            +TCSP D+ H VL++GYG ++D PYWLV+NSWG    ++G+ K+ R  NN CGI  +A Y
Sbjct: 154  KTCSPDDINHGVLVIGYGTENDEPYWLVKNSWGRSWGEQGYVKMARNKNNMCGIASVASY 213

Query: 1022 ATI 1024
             T+
Sbjct: 214  PTV 216


>gi|414589597|tpg|DAA40168.1| TPA: hypothetical protein ZEAMMB73_868349 [Zea mays]
          Length = 252

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 115/220 (52%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 68
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK +  S+ QLV+C  A 
Sbjct: 35  MPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKAISLSEQQLVDCGFAF 94

Query: 69  QCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHF 126
              GC G     + EY  +  GL++E+ YPY+  NG  +FK   +   VK+    + +  
Sbjct: 95  NNFGCKGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICQFKA--ENVGVKVLDSVN-ITL 151

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDN 185
              + +K  +    P+SV            T +  +D    +P D+ HAVL VGYG ++ 
Sbjct: 152 GAEDELKDAVGLVRPVSVAFEVISGFRLYKTGVYTSDHCGTTPMDVNHAVLAVGYGVENG 211

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 212 VPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPVV 251



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 115/220 (52%), Gaps = 8/220 (3%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 799
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK +  S+ QLV+C  A 
Sbjct: 35  MPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKAISLSEQQLVDCGFAF 94

Query: 800 QCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHF 857
              GC G     + EY  +  GL++E+ YPY+  NG  +FK   +   VK+    + +  
Sbjct: 95  NNFGCKGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICQFKA--ENVGVKVLDSVN-ITL 151

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDN 916
              + +K  +    P+SV            T +  +D    +P D+ HAVL VGYG ++ 
Sbjct: 152 GAEDELKDAVGLVRPVSVAFEVISGFRLYKTGVYTSDHCGTTPMDVNHAVLAVGYGVENG 211

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 212 VPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPVV 251



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 114/220 (51%), Gaps = 7/220 (3%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P+  DWR+  +  P  +Q  CGSCW FS  G LE  Y   TGK +  S+ QLV+C    
Sbjct: 35  MPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKAISLSEQQLVDCGFAF 94

Query: 436 SGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYF 492
           +  G   GL  Q  EY  +  GL++E+ YPY+  NG  +FK   +   VK+    + +  
Sbjct: 95  NNFGCKGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICQFKA--ENVGVKVLDSVN-ITL 151

Query: 493 NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDD 551
              + +K  +    P+SV            T +  +D    +P D+ HAVL VGYG ++ 
Sbjct: 152 GAEDELKDAVGLVRPVSVAFEVISGFRLYKTGVYTSDHCGTTPMDVNHAVLAVGYGVENG 211

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           +PYWL +NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 212 VPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPVV 251



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            +P D+ HAVL VGYG ++ +PYWL++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 193  TPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPVV 251


>gi|380026170|ref|XP_003696831.1| PREDICTED: cathepsin O-like [Apis florea]
          Length = 368

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 170/369 (46%), Gaps = 45/369 (12%)

Query: 611 VFLLCGVASCLCLPSLTDRITDQV-VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 669
           + L C    CL L      I   + V  +  LAI   +  DN   ++ F+ ++V+  + Y
Sbjct: 3   LLLYCASELCLILDMEWKTIAFTILVVSLCFLAIPIKVDPDNNEDIKLFQNYVVRYNKSY 62

Query: 670 AND-EEIKERFEYFKQD-----------GHKKHERYGTSEFSDRSPEEILCKT------- 710
            ND  E +ERF+ F++              ++   YG +EFSD S +E L  T       
Sbjct: 63  KNDPSEYEERFKRFQRSLQHIERMNGLRSSQESAYYGLTEFSDMSEDEFLLHTLLPDLPI 122

Query: 711 -GFKWSERTYER---IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
            G K     Y R   +  DR K         +   +P  +DWR K V  P   Q +CG+C
Sbjct: 123 RGEKHKNAPYHRKHQVSTDRMK---------RSISIPSRFDWRDKGVITPVRSQGSCGAC 173

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFFEPSIEYTHQAGLE 822
           WAFS   ++E  +AIK G L   S  ++++CAK     C G D C    S     +  + 
Sbjct: 174 WAFSTIEVIESMFAIKNGTLHSLSVQEMIDCAKNSNFGCEGGDICSL-LSWLLVSKVQIL 232

Query: 823 SEKDYPYKNANGE-KFKCAYDKS---KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
            E  YP     G  K     DK+   K++ FT   F+  +  + +   L  +GP++  +N
Sbjct: 233 QESIYPLVGMTGTCKLGKMTDKAFGIKIQDFTCDSFV--DAEDELLIALATHGPVAAAVN 290

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +    +Y G  I+ + +  S  +L HAV ++GY K   +P+++++NSWG    D+G+  I
Sbjct: 291 ALSWQNYLGGVIQYHCDG-SFDNLNHAVQIIGYDKSVAVPHYIIKNSWGSNFGDKGYMYI 349

Query: 939 ERGNNACGI 947
             GNN CGI
Sbjct: 350 GIGNNLCGI 358



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 170/370 (45%), Gaps = 46/370 (12%)

Query: 245 VFLLCGVASCLCLPSLTDRITDQV-VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 303
           + L C    CL L      I   + V  +  LAI   +  DN   ++ F+ ++V+  + Y
Sbjct: 3   LLLYCASELCLILDMEWKTIAFTILVVSLCFLAIPIKVDPDNNEDIKLFQNYVVRYNKSY 62

Query: 304 AND-EEIKERFEYFKQD-----------GHKKHERYGTSEFSDRSPEEILCKT------- 344
            ND  E +ERF+ F++              ++   YG +EFSD S +E L  T       
Sbjct: 63  KNDPSEYEERFKRFQRSLQHIERMNGLRSSQESAYYGLTEFSDMSEDEFLLHTLLPDLPI 122

Query: 345 -GFKWSERTYER---IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
            G K     Y R   +  DR K         +   +P  +DWR K V  P   Q +CG+C
Sbjct: 123 RGEKHKNAPYHRKHQVSTDRMK---------RSISIPSRFDWRDKGVITPVRSQGSCGAC 173

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-GCGG---CDGLEQPIEYTHQAGL 456
           WAFS   ++E  +AIK G L   S  ++++CAK  + GC G   C  L   +    +  +
Sbjct: 174 WAFSTIEVIESMFAIKNGTLHSLSVQEMIDCAKNSNFGCEGGDICSLLSWLL--VSKVQI 231

Query: 457 ESEKDYPYRNGNGE-KFKCAYDKS---KVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             E  YP     G  K     DK+   K++ FT   F+  +  + +   L  +GP++  +
Sbjct: 232 LQESIYPLVGMTGTCKLGKMTDKAFGIKIQDFTCDSFV--DAEDELLIALATHGPVAAAV 289

Query: 513 NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           N+     Y G  I+ + +  S  +L HAV ++GY K   +P+++ +NSWG    D+G+  
Sbjct: 290 NALSWQNYLGGVIQYHCDG-SFDNLNHAVQIIGYDKSVAVPHYIIKNSWGSNFGDKGYMY 348

Query: 573 IERGNNACGI 582
           I  GNN CGI
Sbjct: 349 IGIGNNLCGI 358



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 12/221 (5%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
            +++   +P  +DWR K V  P   Q  CG+CWAFS   ++E  +AIK G L   S  ++
Sbjct: 142 RMKRSISIPSRFDWRDKGVITPVRSQGSCGACWAFSTIEVIESMFAIKNGTLHSLSVQEM 201

Query: 64  VECAKQ----CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDKS---KV 115
           ++CAK     C G D C    S     +  +  E  YP     G  K     DK+   K+
Sbjct: 202 IDCAKNSNFGCEGGDICSL-LSWLLVSKVQILQESIYPLVGMTGTCKLGKMTDKAFGIKI 260

Query: 116 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 175
           + FT   F+  +  + +   L  +GP++  +N+    +Y G  I+ + +  S  +L HAV
Sbjct: 261 QDFTCDSFV--DAEDELLIALATHGPVAAAVNALSWQNYLGGVIQYHCDG-SFDNLNHAV 317

Query: 176 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
            ++GY K   +P+++++NSWG    D+G+  I  GNN CGI
Sbjct: 318 QIIGYDKSVAVPHYIIKNSWGSNFGDKGYMYIGIGNNLCGI 358



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 32/47 (68%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            +L HAV ++GY K   +P+++++NSWG    D+G+  I  GNN CGI
Sbjct: 312  NLNHAVQIIGYDKSVAVPHYIIKNSWGSNFGDKGYMYIGIGNNLCGI 358


>gi|9542|emb|CAA78443.1| cysteine proteinase [Leishmania mexicana]
          Length = 443

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 138/301 (45%), Gaps = 22/301 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C    +GC G     + ++  Q     L +E  
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMDNGCSGGLMLQAFDWLLQNTNGHLHTEDS 213

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+ + S++ +    D     GS  + M   L K GP+++ L++     
Sbjct: 214 YPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 272

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 273 YKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 328

Query: 945 C 945
           C
Sbjct: 329 C 329



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 140/302 (46%), Gaps = 23/302 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C    +GC G   L Q  ++  Q     L +E 
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMDNGCSGGLML-QAFDWLLQNTNGHLHTED 212

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+ + S++ +    D     GS  + M   L K GP+++ L++    
Sbjct: 213 SYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 271

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 272 SYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 327

Query: 579 AC 580
           AC
Sbjct: 328 AC 329



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMD 185

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     
Sbjct: 186 NGCSGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLI 244

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C    L H VLLVGY     
Sbjct: 245 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGE 300

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 301 VPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 31/50 (62%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
             C    L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  ACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|11055|emb|CAA45129.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 320

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 145/313 (46%), Gaps = 31/313 (9%)

Query: 661 FIVKRGRQYANDEEIKERFEYFKQ------DGHKKHE------RYGTSEFSDRSPEEI-L 707
           F  + GR+Y + +E   R   F+Q      D +KK E      +   ++F D + EE   
Sbjct: 22  FKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNA 81

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
              G+K   R   + V   E            GP+    DWR K +  P  DQ  CGSCW
Sbjct: 82  VMKGYKKGSRGEPKAVFTAEA-----------GPMAADVDWRTKALVTPVKDQEQCGSCW 130

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESE 824
           AFS  G LEGQ+ +K  +LV  S+ QLV+C+      GC G +   + +Y     G+++E
Sbjct: 131 AFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTE 190

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
             YPY+    E   C +D + +           +  E +++ +   GP+SV +++     
Sbjct: 191 SSYPYE---AEDRSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSF 247

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NN 943
              +     ++ CSP  L H VL VGYG +    YWLV+NSWG    D G+ K+ R  +N
Sbjct: 248 QFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDN 307

Query: 944 ACGIEQIAGYATI 956
            CGI     Y T+
Sbjct: 308 NCGIASEPSYPTV 320



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 144/314 (45%), Gaps = 32/314 (10%)

Query: 295 FIVKRGRQYANDEEIKERFEYFKQ------DGHKKHE------RYGTSEFSDRSPEEI-L 341
           F  + GR+Y + +E   R   F+Q      D +KK E      +   ++F D + EE   
Sbjct: 22  FKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNA 81

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
              G+K   R   + V   E            GP+    DWR K +  P  DQ  CGSCW
Sbjct: 82  VMKGYKKGSRGEPKAVFTAEA-----------GPMAADVDWRTKALVTPVKDQEQCGSCW 130

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCGGCDGLEQPIEYTH-QAGLES 458
           AFS  G LEGQ+ +K  +LV  S+ QLV+C+      GCGG   +    +Y     G+++
Sbjct: 131 AFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGG-GWMTSAFDYIKDNGGIDT 189

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E  YPY     E   C +D + +           +  E +++ +   GP+SV +++    
Sbjct: 190 ESSYPYE---AEDRSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFS 246

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-N 577
           F   +     ++ CSP  L H VL VGYG +    YWL +NSWG    D G+ K+ R  +
Sbjct: 247 FQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRD 306

Query: 578 NACGIEQIAGYATI 591
           N CGI     Y T+
Sbjct: 307 NNCGIASEPSYPTV 320



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           GP+    DWR K +  P  DQ  CGSCWAFS  G LEGQ+ +K  +LV  S+ QLV+C+ 
Sbjct: 103 GPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCST 162

Query: 69  Q--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GC G +   + +Y     G+++E  YPY+    E   C +D + +          
Sbjct: 163 DYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYE---AEDRSCRFDANSIGAICTGSVEV 219

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            +  E +++ +   GP+SV +++        +     ++ CSP  L H VL VGYG +  
Sbjct: 220 QHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTEST 279

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWLV+NSWG    D G+ K+ R  +N CGI     Y T+
Sbjct: 280 KDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYPTV 320



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            ++ CSP  L H VL VGYG +    YWLV+NSWG    D G+ K+ R  +N CGI     
Sbjct: 257  EQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPS 316

Query: 1021 YATI 1024
            Y T+
Sbjct: 317  YPTV 320


>gi|12805315|gb|AAH02125.1| Ctss protein [Mus musculus]
          Length = 340

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 133/271 (49%), Gaps = 21/271 (7%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCGGCDG 443
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GCGG   
Sbjct: 135 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 194

Query: 444 LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKI 501
            E         G+E++  YPY+       KC Y+ SK +  T   +  L F   + +K+ 
Sbjct: 195 TEAFQYIIDNGGIEADASYPYK---AMDEKCHYN-SKNRAATCSRYIQLPFGDEDALKEA 250

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
           +   GP+SVG+++    F+       +D +C+  ++ H VL+VGYG  D   YWL +NSW
Sbjct: 251 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 309

Query: 562 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 310 GLNFGDQGYIRMARNNKNHCGIASDCSYPEI 340



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 135/271 (49%), Gaps = 22/271 (8%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFF 809
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GC G + 
Sbjct: 135 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 194

Query: 810 EPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGSETMKKI 866
             + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++   F   + +K+ 
Sbjct: 195 TEAFQYIIDNGGIEADASYPYKAMDE---KCHYN-SKNRAATCSRYIQLPFGDEDALKEA 250

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926
           +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  D   YWLV+NSW
Sbjct: 251 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 309

Query: 927 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 310 GLNFGDQGYIRMARNNKNHCGIASDCSYPEI 340



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR+K        Q  CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ + 
Sbjct: 123 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 182

Query: 70  ---CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++ 
Sbjct: 183 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKAMDE---KCHYN-SKNRAATCSRYIQ 238

Query: 126 --FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
             F   + +K+ +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  
Sbjct: 239 LPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTL 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 298 DGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASDCSYPEI 340



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V +D +C+  ++ H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI  
Sbjct: 275  VYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIAS 333

Query: 1018 IAGYATI 1024
               Y  I
Sbjct: 334  DCSYPEI 340


>gi|118125|sp|P25784.1|CYSP3_HOMAM RecName: Full=Digestive cysteine proteinase 3; Flags: Precursor
          Length = 321

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 145/313 (46%), Gaps = 31/313 (9%)

Query: 661 FIVKRGRQYANDEEIKERFEYFKQ------DGHKKHE------RYGTSEFSDRSPEEI-L 707
           F  + GR+Y + +E   R   F+Q      D +KK E      +   ++F D + EE   
Sbjct: 23  FKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNA 82

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
              G+K   R   + V   E            GP+    DWR K +  P  DQ  CGSCW
Sbjct: 83  VMKGYKKGSRGEPKAVFTAEA-----------GPMAADVDWRTKALVTPVKDQEQCGSCW 131

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESE 824
           AFS  G LEGQ+ +K  +LV  S+ QLV+C+      GC G +   + +Y     G+++E
Sbjct: 132 AFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTE 191

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
             YPY+    E   C +D + +           +  E +++ +   GP+SV +++     
Sbjct: 192 SSYPYE---AEDRSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSF 248

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NN 943
              +     ++ CSP  L H VL VGYG +    YWLV+NSWG    D G+ K+ R  +N
Sbjct: 249 QFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDN 308

Query: 944 ACGIEQIAGYATI 956
            CGI     Y T+
Sbjct: 309 NCGIASEPSYPTV 321



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 144/314 (45%), Gaps = 32/314 (10%)

Query: 295 FIVKRGRQYANDEEIKERFEYFKQ------DGHKKHE------RYGTSEFSDRSPEEI-L 341
           F  + GR+Y + +E   R   F+Q      D +KK E      +   ++F D + EE   
Sbjct: 23  FKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNA 82

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
              G+K   R   + V   E            GP+    DWR K +  P  DQ  CGSCW
Sbjct: 83  VMKGYKKGSRGEPKAVFTAEA-----------GPMAADVDWRTKALVTPVKDQEQCGSCW 131

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCGGCDGLEQPIEYTH-QAGLES 458
           AFS  G LEGQ+ +K  +LV  S+ QLV+C+      GCGG   +    +Y     G+++
Sbjct: 132 AFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGG-GWMTSAFDYIKDNGGIDT 190

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E  YPY     E   C +D + +           +  E +++ +   GP+SV +++    
Sbjct: 191 ESSYPYE---AEDRSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFS 247

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-N 577
           F   +     ++ CSP  L H VL VGYG +    YWL +NSWG    D G+ K+ R  +
Sbjct: 248 FQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRD 307

Query: 578 NACGIEQIAGYATI 591
           N CGI     Y T+
Sbjct: 308 NNCGIASEPSYPTV 321



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           GP+    DWR K +  P  DQ  CGSCWAFS  G LEGQ+ +K  +LV  S+ QLV+C+ 
Sbjct: 104 GPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCST 163

Query: 69  Q--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GC G +   + +Y     G+++E  YPY+    E   C +D + +          
Sbjct: 164 DYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYE---AEDRSCRFDANSIGAICTGSVEV 220

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            +  E +++ +   GP+SV +++        +     ++ CSP  L H VL VGYG +  
Sbjct: 221 QHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTEST 280

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWLV+NSWG    D G+ K+ R  +N CGI     Y T+
Sbjct: 281 KDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYPTV 321



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            ++ CSP  L H VL VGYG +    YWLV+NSWG    D G+ K+ R  +N CGI     
Sbjct: 258  EQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPS 317

Query: 1021 YATI 1024
            Y T+
Sbjct: 318  YPTV 321


>gi|341888721|gb|EGT44656.1| hypothetical protein CAEBREN_22029 [Caenorhabditis brenneri]
          Length = 396

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 150/310 (48%), Gaps = 23/310 (7%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEE 705
           + + FK F  K  R++   EE K RFE F+++     E        +YG ++FSD++  E
Sbjct: 84  LQQQFKDFNAKFQREHKTLEEYKMRFEIFQKNLRDIEELNLKNPSVQYGINKFSDKTESE 143

Query: 706 I---LCKTGF---KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 759
           +   L    F     S  T + + + R     ++  V++    PD  DWR         D
Sbjct: 144 LKNLLMDKKFLDSSLSNSTLKTLSSYRNP-RNIIKNVQR----PDYIDWRNDGKVMSVKD 198

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA 819
           Q  CGSCWAF+    +E QYAI+ G L   S+ +LV+C     GC G F   ++ +    
Sbjct: 199 QGQCGSCWAFATVAAVESQYAIRKGTLWSLSEQELVDCDGASYGCGGGFLTSALGFILGN 258

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           GLE+E DYPY     +  +C  +  K +++  + +      + + + +   GP+S  ++ 
Sbjct: 259 GLETEDDYPYSATRHD--QCWINGDKTRVWIDEGYQLTMSEDDVAEWVANVGPVSFAMSV 316

Query: 880 DLIHDYNGTPIRKNDE-TCSPYDLG-HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
                Y    I    E  C    LG HA+ ++GYG++    YW+V+NSWG    D+G+ +
Sbjct: 317 PKSFPYYHDGIYSPSEHECKDESLGYHAMAIIGYGQEGGQNYWIVKNSWGGSWGDQGYMR 376

Query: 938 IERGNNACGI 947
           + RG NACG+
Sbjct: 377 LARGVNACGM 386



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEE 339
           + + FK F  K  R++   EE K RFE F+++     E        +YG ++FSD++  E
Sbjct: 84  LQQQFKDFNAKFQREHKTLEEYKMRFEIFQKNLRDIEELNLKNPSVQYGINKFSDKTESE 143

Query: 340 I---LCKTGF---KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 393
           +   L    F     S  T + + + R     ++  V++    PD  DWR         D
Sbjct: 144 LKNLLMDKKFLDSSLSNSTLKTLSSYRNP-RNIIKNVQR----PDYIDWRNDGKVMSVKD 198

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ 453
           Q  CGSCWAF+    +E QYAI+ G L   S+ +LV+C     GCGG   L   + +   
Sbjct: 199 QGQCGSCWAFATVAAVESQYAIRKGTLWSLSEQELVDCDGASYGCGG-GFLTSALGFILG 257

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
            GLE+E DYPY     +  +C  +  K +++  + +      + + + +   GP+S  ++
Sbjct: 258 NGLETEDDYPYSATRHD--QCWINGDKTRVWIDEGYQLTMSEDDVAEWVANVGPVSFAMS 315

Query: 514 -SHLIHFYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
                 +Y+      ++  C    LG HA+ ++GYG++    YW+ +NSWG    D+G+ 
Sbjct: 316 VPKSFPYYHDGIYSPSEHECKDESLGYHAMAIIGYGQEGGQNYWIVKNSWGGSWGDQGYM 375

Query: 572 KIERGNNACGI 582
           ++ RG NACG+
Sbjct: 376 RLARGVNACGM 386



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 4/207 (1%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           PD  DWR         DQ  CGSCWAF+    +E QYAI+ G L   S+ +LV+C     
Sbjct: 182 PDYIDWRNDGKVMSVKDQGQCGSCWAFATVAAVESQYAIRKGTLWSLSEQELVDCDGASY 241

Query: 72  GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           GC G F   ++ +    GLE+E DYPY     +  +C  +  K +++  + +      + 
Sbjct: 242 GCGGGFLTSALGFILGNGLETEDDYPYSATRHD--QCWINGDKTRVWIDEGYQLTMSEDD 299

Query: 132 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE-TCSPYDLG-HAVLLVGYGKQDNIPYW 189
           + + +   GP+S  ++      Y    I    E  C    LG HA+ ++GYG++    YW
Sbjct: 300 VAEWVANVGPVSFAMSVPKSFPYYHDGIYSPSEHECKDESLGYHAMAIIGYGQEGGQNYW 359

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGI 216
           +V+NSWG    D+G+ ++ RG NACG+
Sbjct: 360 IVKNSWGGSWGDQGYMRLARGVNACGM 386



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 961  NDETCSPYDLG-HAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            ++  C    LG HA+ ++GYG++    YW+V+NSWG    D+G+ ++ RG NACG+
Sbjct: 331  SEHECKDESLGYHAMAIIGYGQEGGQNYWIVKNSWGGSWGDQGYMRLARGVNACGM 386


>gi|343472974|emb|CCD15016.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 148/320 (46%), Gaps = 30/320 (9%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V    P P   DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVSTGRP-PMTVDWRKKGAVTPVKDQGKC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY-----THQ 818
            S WAFS  G +EGQ+ +   +L   S+  LV C     GC   F  P I +     +++
Sbjct: 148 DSSWAFSATGNIEGQWKVAGHELTSLSEQMLVSCDTDDLGCRDGF--PDIAFNWIVSSNK 205

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETM-KKILYKYGPLSVL 876
             + +E+ YPY +  G    C  DKS KV     +D +     E M  + L + GP ++ 
Sbjct: 206 GNVFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDHVDLARDEDMIAEWLARKGPAAIT 263

Query: 877 LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFF 936
           +++     Y G  +     +C   ++  A LLVGY      PYW+++NSWG    +EG+ 
Sbjct: 264 VDATSFQRYTGGVL----TSCISKEMNSAALLVGYDDTSKPPYWIIKNSWGKGWGEEGYI 319

Query: 937 KIERGNNACGIEQIAGYATI 956
           +IE+G N C +++ A  A +
Sbjct: 320 RIEKGTNQCLVQEYARSAVV 339



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 147/318 (46%), Gaps = 25/318 (7%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V    P P   DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVSTGRP-PMTVDWRKKGAVTPVKDQGKC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC--GGCDGLEQPIEYTHQAG 455
            S WAFS  G +EGQ+ +   +L   S+  LV C     GC  G  D     I  +++  
Sbjct: 148 DSSWAFSATGNIEGQWKVAGHELTSLSEQMLVSCDTDDLGCRDGFPDIAFNWIVSSNKGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETM-KKILYKYGPLSVGLN 513
           + +E+ YPY +G G    C  DKS KV     +D +     E M  + L + GP ++ ++
Sbjct: 208 VFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDHVDLARDEDMIAEWLARKGPAAITVD 265

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           +     Y G  +     +C   ++  A LLVGY      PYW+ +NSWG    +EG+ +I
Sbjct: 266 ATSFQRYTGGVL----TSCISKEMNSAALLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRI 321

Query: 574 ERGNNACGIEQIAGYATI 591
           E+G N C +++ A  A +
Sbjct: 322 EKGTNQCLVQEYARSAVV 339



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 109/224 (48%), Gaps = 15/224 (6%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P   DWRKK    P  DQ  C S WAFS  G +EGQ+ +   +L   S+  LV C  
Sbjct: 124 GRPPMTVDWRKKGAVTPVKDQGKCDSSWAFSATGNIEGQWKVAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIEY-----THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKD 122
              GC   F  P I +     +++  + +E+ YPY +  G    C  DKS KV     +D
Sbjct: 184 DDLGCRDGF--PDIAFNWIVSSNKGNVFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRD 239

Query: 123 FLHFNGSETM-KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
            +     E M  + L + GP ++ +++     Y G  +     +C   ++  A LLVGY 
Sbjct: 240 HVDLARDEDMIAEWLARKGPAAITVDATSFQRYTGGVL----TSCISKEMNSAALLVGYD 295

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                PYW+++NSWG    +EG+ +IE+G N C +++ A  A +
Sbjct: 296 DTSKPPYWIIKNSWGKGWGEEGYIRIEKGTNQCLVQEYARSAVV 339


>gi|332326585|gb|AEE42616.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 139/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  BQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKBQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHRLXXLSEQQLVSCDDKDSGCXGGLMTQAFEWLLRXMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY ++ G+  +C      V       ++    +ET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIESNETVMAAWLAKSGPISIGVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYESGVL----TSCAGKHLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  BQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKBQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGC G   + Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHRLXXLSEQQLVSCDDKDSGCXG-GLMTQAFEWLLRXMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY +  G+  +C      V       ++    +ET M   L K GP+S+G+++  
Sbjct: 210 TEDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIESNETVMAAWLAKSGPISIGVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G
Sbjct: 270 FMSYESGVL----TSCAGKHLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  BQ  CGSCWAFS  G +E Q+A+   +L   S+ QLV C  + 
Sbjct: 126 VPDAVDWREKGAVTPVKBQGACGSCWAFSAVGNIESQWAVAGHRLXXLSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC G     + E+        + +E  YPY ++ G+  +C      V       ++   
Sbjct: 186 SGCXGGLMTQAFEWLLRXMNGTMFTEDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            +ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +
Sbjct: 246 SNETVMAAWLAKSGPISIGVDASSFMSYESGVL----TSCAGKHLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCAGKHLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|218478060|dbj|BAH03396.1| cathepsin L-like cysteine peptidase [Taenia saginata]
          Length = 338

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 168/353 (47%), Gaps = 33/353 (9%)

Query: 621 LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER-- 678
           +  P L   I   + A V+T A+          +   +  + ++ GR Y+  EE   R  
Sbjct: 2   IVTPFLLLLIIHPLAAVVETSAL-----LTERELSRQWIGWKLQHGRVYSEKEEAYRRGI 56

Query: 679 ----FEYFKQDGHKKH---ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 729
                 Y K    + +   E Y  G ++F+D    E   +       R   R    R ++
Sbjct: 57  FARNLLYIKGQNRRFNAGLESYSTGLNQFADLESSEFSERF---LGTRPGSRAAGKRGRI 113

Query: 730 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 789
            K L        +PD  DWR KN+     +Q  CGSCWAFS  G LEG +A KTGKL+  
Sbjct: 114 WKALASAAD---LPDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISL 170

Query: 790 SKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVK 847
           S+ QLV+C+ +    GC+G +   + +Y  +  +E E  YPY+  +G    C Y++S + 
Sbjct: 171 SEQQLVDCSLKNGNDGCNGGYMSYAFKYLEEHSIEPESAYPYRATDG---PCRYNES-LG 226

Query: 848 LFTGKDFLHF-NGSET-MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGH 904
           + T  D      G+ET + + +   GP+S+ ++ S L   +    I K+   CS   L H
Sbjct: 227 VGTVTDIGDIPEGNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKS-HWCSSKFLNH 285

Query: 905 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
            VL +GYGKQD  PYWLV+NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 286 GVLAIGYGKQDGKPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 338



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 165/353 (46%), Gaps = 32/353 (9%)

Query: 255 LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER-- 312
           +  P L   I   + A V+T A+          +   +  + ++ GR Y+  EE   R  
Sbjct: 2   IVTPFLLLLIIHPLAAVVETSAL-----LTERELSRQWIGWKLQHGRVYSEKEEAYRRGI 56

Query: 313 ----FEYFKQDGHKKH---ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 363
                 Y K    + +   E Y  G ++F+D    E   +       R   R    R ++
Sbjct: 57  FARNLLYIKGQNRRFNAGLESYSTGLNQFADLESSEFSERF---LGTRPGSRAAGKRGRI 113

Query: 364 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 423
            K L        +PD  DWR KN+     +Q  CGSCWAFS  G LEG +A KTGKL+  
Sbjct: 114 WKALASAAD---LPDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISL 170

Query: 424 SKSQLVECAKQCSGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKV 481
           S+ QLV+C+ + +G  GC+G  +    +Y  +  +E E  YPYR  +G    C Y++S +
Sbjct: 171 SEQQLVDCSLK-NGNDGCNGGYMSYAFKYLEEHSIEPESAYPYRATDG---PCRYNES-L 225

Query: 482 KLFTGKDFLYF-NGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGH 539
            + T  D      G+ET + + +   GP+S+ +++  + F            CS   L H
Sbjct: 226 GVGTVTDIGDIPEGNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKSHWCSSKFLNH 285

Query: 540 AVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
            VL +GYGKQD  PYWL +NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 286 GVLAIGYGKQDGKPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 338



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 125/221 (56%), Gaps = 11/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD  DWR KN+     +Q +CGSCWAFS  G LEG +A KTGKL+  S+ QLV+C+ + 
Sbjct: 123 LPDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLKN 182

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-N 127
              GC+G +   + +Y  +  +E E  YPY+  +G    C Y++S + + T  D      
Sbjct: 183 GNDGCNGGYMSYAFKYLEEHSIEPESAYPYRATDG---PCRYNES-LGVGTVTDIGDIPE 238

Query: 128 GSET-MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           G+ET + + +   GP+S+ ++ S L   +    I K+   CS   L H VL +GYGKQD 
Sbjct: 239 GNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKS-HWCSSKFLNHGVLAIGYGKQDG 297

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            PYWLV+NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 298 KPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 338



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            CS   L H VL +GYGKQD  PYWLV+NSWG     +G+  + +  +N CG+  +A +  
Sbjct: 278  CSSKFLNHGVLAIGYGKQDGKPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPY 337

Query: 1024 I 1024
            +
Sbjct: 338  V 338


>gi|8393221|ref|NP_059016.1| cathepsin S preproprotein [Rattus norvegicus]
 gi|399190|sp|Q02765.1|CATS_RAT RecName: Full=Cathepsin S; Flags: Precursor
 gi|203650|gb|AAA40994.1| cathepsin S precursor [Rattus norvegicus]
          Length = 330

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 128/269 (47%), Gaps = 18/269 (6%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G +   D +PEE++   G     R + R    +    + L         PD+ DWR+K  
Sbjct: 74  GMNHMGDMTPEEVIGYMGSLRIPRPWNRSGTLKSSSNQTL---------PDSVDWREKGC 124

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFF 809
                 Q +CGSCWAFS  G LEGQ  +KTGKLV  S   LV+C+ +      GC G F 
Sbjct: 125 VTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFM 184

Query: 810 EPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSETMKKILY 868
             + +Y     ++SE  YPYK  +    KC YD K++    +    L F   E +K+ + 
Sbjct: 185 TEAFQYIIDTSIDSEASYPYKAMDE---KCLYDPKNRAATCSRYIELPFGDEEALKEAVA 241

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
             GP+SV ++      +        D+     ++ H VL+VGYG  D   YWLV+NSWG 
Sbjct: 242 TKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYGTLDGKDYWLVKNSWGL 301

Query: 929 IGPDEGFFKIERGN-NACGIEQIAGYATI 956
              D+G+ ++ R N N CGI     Y  I
Sbjct: 302 HFGDQGYIRMARNNKNHCGIASYCSYPEI 330



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 135/272 (49%), Gaps = 23/272 (8%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G +   D +PEE++   G     R + R    +    + L         PD+ DWR+K  
Sbjct: 74  GMNHMGDMTPEEVIGYMGSLRIPRPWNRSGTLKSSSNQTL---------PDSVDWREKGC 124

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCGGCDG 443
                 Q +CGSCWAFS  G LEGQ  +KTGKLV  S   LV+C+ +      GCGG   
Sbjct: 125 VTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGG-GF 183

Query: 444 LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLYFNGSETMKKIL 502
           + +  +Y     ++SE  YPY+       KC YD K++    +    L F   E +K+ +
Sbjct: 184 MTEAFQYIIDTSIDSEASYPYK---AMDEKCLYDPKNRAATCSRYIELPFGDEEALKEAV 240

Query: 503 YKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNS 560
              GP+SVG++  SH   F   + +  +D +C+  ++ H VL+VGYG  D   YWL +NS
Sbjct: 241 ATKGPVSVGIDDASHSSFFLYQSGVY-DDPSCTE-NMNHGVLVVGYGTLDGKDYWLVKNS 298

Query: 561 WGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           WG    D+G+ ++ R N N CGI     Y  I
Sbjct: 299 WGLHFGDQGYIRMARNNKNHCGIASYCSYPEI 330



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 112/221 (50%), Gaps = 9/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD+ DWR+K        Q  CGSCWAFS  G LEGQ  +KTGKLV  S   LV+C+ + 
Sbjct: 113 LPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEE 172

Query: 70  ---CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLH 125
                GC G F   + +Y     ++SE  YPYK  +    KC YD K++    +    L 
Sbjct: 173 KYGNKGCGGGFMTEAFQYIIDTSIDSEASYPYKAMDE---KCLYDPKNRAATCSRYIELP 229

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           F   E +K+ +   GP+SV ++      +        D+     ++ H VL+VGYG  D 
Sbjct: 230 FGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYGTLDG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 290 KDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCSYPEI 330



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V +D +C+  ++ H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI  
Sbjct: 265  VYDDPSCTE-NMNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIAS 323

Query: 1018 IAGYATI 1024
               Y  I
Sbjct: 324  YCSYPEI 330


>gi|22653679|sp|Q26636.1|CATL_SARPE RecName: Full=Cathepsin L; Contains: RecName: Full=Cathepsin L
           heavy chain; Contains: RecName: Full=Cathepsin L light
           chain; Flags: Precursor
 gi|505140|dbj|BAA03970.1| cathepsin L precursor [Sarcophaga peregrina]
          Length = 339

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 156/321 (48%), Gaps = 23/321 (7%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 701
           I E +  + ++  + YAN+ E + R + F ++ HK  KH           + G ++++D 
Sbjct: 24  IKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADM 83

Query: 702 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
              E   K        T  +++ +R  +            VP + DWR+        DQ 
Sbjct: 84  LHHEF--KETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQG 141

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-Q 818
            CGSCWAFS  G LEGQ+  K G LV  S+  LV+C+ +   +GC+G   + +  Y    
Sbjct: 142 HCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDN 201

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVLL 877
            G+++EK YPY+   G    C ++K+ +    TG   +     E MKK +   GP+SV +
Sbjct: 202 GGIDTEKSYPYE---GIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAI 258

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFF 936
           ++        +    N+  C   +L H VL+VGYG  ++ + YWLV+NSWG    ++G+ 
Sbjct: 259 DASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYI 318

Query: 937 KIERG-NNACGIEQIAGYATI 956
           K+ R  NN CGI   + Y T+
Sbjct: 319 KMARNQNNQCGIATASSYPTV 339



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 154/322 (47%), Gaps = 24/322 (7%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 335
           I E +  + ++  + YAN+ E + R + F ++ HK  KH           + G ++++D 
Sbjct: 24  IKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADM 83

Query: 336 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
              E   K        T  +++ +R  +            VP + DWR+        DQ 
Sbjct: 84  LHHEF--KETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQG 141

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH- 452
            CGSCWAFS  G LEGQ+  K G LV  S+  LV+C+ +  G  GC+G  ++    Y   
Sbjct: 142 HCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKY-GNNGCNGGLMDNAFRYIKD 200

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLYFNGSETMKKILYKYGPLSVG 511
             G+++EK YPY    G    C ++K+ +    TG   +     E MKK +   GP+SV 
Sbjct: 201 NGGIDTEKSYPYE---GIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVA 257

Query: 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEGF 570
           +++    F   +    N+  C   +L H VL+VGYG  +  + YWL +NSWG    ++G+
Sbjct: 258 IDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGY 317

Query: 571 FKIERG-NNACGIEQIAGYATI 591
            K+ R  NN CGI   + Y T+
Sbjct: 318 IKMARNQNNQCGIATASSYPTV 339



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 9/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           VP + DWR+        DQ  CGSCWAFS  G LEGQ+  K G LV  S+  LV+C+ + 
Sbjct: 122 VPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKY 181

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHF 126
             +GC+G   + +  Y     G+++EK YPY+   G    C ++K+ +    TG   +  
Sbjct: 182 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYE---GIDDSCHFNKATIGATDTGFVDIPE 238

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN- 185
              E MKK +   GP+SV +++        +    N+  C   +L H VL+VGYG  ++ 
Sbjct: 239 GDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESG 298

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           + YWLV+NSWG    ++G+ K+ R  NN CGI   + Y T+
Sbjct: 299 MDYWLVKNSWGTTWGEQGYIKMARNQNNQCGIATASSYPTV 339



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIE 1016
            V N+  C   +L H VL+VGYG  +  + YWLV+NSWG    ++G+ K+ R  NN CGI 
Sbjct: 272  VYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGIA 331

Query: 1017 QIAGYATI 1024
              + Y T+
Sbjct: 332  TASSYPTV 339


>gi|226476540|emb|CAX72162.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 157/321 (48%), Gaps = 35/321 (10%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGEIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + ++  +         E+E  + PVP  WDWR          Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKHQGL 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC+G + + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCEGGYMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLS---VL 876
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+S   V 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 877 LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFF 936
           LNS ++  Y       ND  C   D+ HAVL+VGYG +    YWL++NSWG     +G+F
Sbjct: 254 LNSLIM--YKSGVFESND--CKYGDINHAVLVVGYGNEHGKDYWLIKNSWGDFWGSKGYF 309

Query: 937 KIERG-NNACGIEQIAGYATI 956
           K+ R  +N CG+   A +  +
Sbjct: 310 KLRRNKHNMCGVASNASFPLL 330



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 159/322 (49%), Gaps = 36/322 (11%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGEIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + ++  +         E+E  + PVP  WDWR          Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKHQGL 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+    G  GC+G  ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP-YGNYGCEGGYMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVG-- 511
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG  
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 512 -LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGF 570
            LNS LI + +G     ND  C   D+ HAVL+VGYG +    YWL +NSWG     +G+
Sbjct: 253 ALNS-LIMYKSGV-FESND--CKYGDINHAVLVVGYGNEHGKDYWLIKNSWGDFWGSKGY 308

Query: 571 FKIERG-NNACGIEQIAGYATI 591
           FK+ R  +N CG+   A +  +
Sbjct: 309 FKLRRNKHNMCGVASNASFPLL 330



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 116/223 (52%), Gaps = 14/223 (6%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR          Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSTWDWRDHGAVTAVKHQGLCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLS---VLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
              +T++K +Y+YGP+S   V LNS ++  Y       ND  C   D+ HAVL+VGYG +
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVALNSLIM--YKSGVFESND--CKYGDINHAVLVVGYGNE 287

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
               YWL++NSWG     +G+FK+ R  +N CG+   A +  +
Sbjct: 288 HGKDYWLIKNSWGDFWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ HAVL+VGYG +    YWL++NSWG     +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKYGDINHAVLVVGYGNEHGKDYWLIKNSWGDFWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|378943048|gb|AFC76265.1| cathepsin L-like protease [Leishmania major]
          Length = 348

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 146/324 (45%), Gaps = 27/324 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E + R   F+++            H R+G ++F D S E +   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQRRLANFERNLELMREHQARNPHARFGITKFFDLS-EAVFAA 96

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
                +        A ++   +   +   D   VPDA DWR+K    P  +Q ACGSCWA
Sbjct: 97  RYLNGAAY----FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWA 152

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEK 825
           FS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +EK
Sbjct: 153 FSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEK 212

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHD 884
            YPY + NG+  +C+             ++    SE  M   L K GP+S+ +++     
Sbjct: 213 SYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSFMS 272

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 273 YHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNA 328

Query: 945 CGIEQIAGYATIDVVKNDETCSPY 968
           C    + GY     V   ++ +PY
Sbjct: 329 C---LLTGYPV--SVHVSQSPTPY 347



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 142/303 (46%), Gaps = 25/303 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E + R   F+++            H R+G ++F D S E +   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQRRLANFERNLELMREHQARNPHARFGITKFFDLS-EAVFAA 96

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
                +        A ++   +   +   D   VPDA DWR+K    P  +Q ACGSCWA
Sbjct: 97  RYLNGAAY----FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWA 152

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLESE 459
           FS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + +E
Sbjct: 153 FSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVFTE 211

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SHLI 517
           K YPY +GNG+  +C+             ++    SE  M   L K GP+S+ ++ S  +
Sbjct: 212 KSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSFM 271

Query: 518 HFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN 577
            +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G 
Sbjct: 272 SYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 578 NAC 580
           NAC
Sbjct: 327 NAC 329



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY + NG+  +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|308462787|ref|XP_003093674.1| hypothetical protein CRE_29187 [Caenorhabditis remanei]
 gi|308249538|gb|EFO93490.1| hypothetical protein CRE_29187 [Caenorhabditis remanei]
          Length = 392

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 151/305 (49%), Gaps = 22/305 (7%)

Query: 655 LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEE 705
           L+ F+ F  K  + + N  E KERF  F+ +  KK E          +  ++FSD S  E
Sbjct: 88  LQEFRDFNQKFQKIHKNSVEFKERFLIFRGN-LKKLEILRSSNPDIDFSINQFSDMSENE 146

Query: 706 ILCKTGFKWS-ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
           +      K   ER ++       K   + M + +    P+  DWR         +Q ACG
Sbjct: 147 LKLILLDKKLLERNFQNSTL---KSFDLPMNLTR----PERIDWRDSGKVMSVKNQGACG 199

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESE 824
           SCWAF+    +E QYAI+ G L   S+ +LV+C  +  GC G F + ++ +    GLE+E
Sbjct: 200 SCWAFATVAAVESQYAIRKGTLWSLSEQELVDCDGESYGCGGGFLDKALGWVLGNGLETE 259

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIH 883
            DYPY+    +  +C  +  K ++   + +      +++   +   GP++  ++  +   
Sbjct: 260 DDYPYECTQHD--QCYINGGKTRVTVDEGWSLGRDEDSIADWVASVGPVAFAMSVPNSFT 317

Query: 884 DYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
            Y+      ++  C    LG HA+ L+GYG + N PYW+V+NSWG    D+G+ ++ RGN
Sbjct: 318 AYSNGVYNPSEHECRDESLGYHAMTLIGYGTEGNQPYWIVKNSWGSSWGDQGYMRLARGN 377

Query: 943 NACGI 947
           NACG+
Sbjct: 378 NACGM 382



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 151/307 (49%), Gaps = 25/307 (8%)

Query: 289 LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEE 339
           L+ F+ F  K  + + N  E KERF  F+ +  KK E          +  ++FSD S  E
Sbjct: 88  LQEFRDFNQKFQKIHKNSVEFKERFLIFRGN-LKKLEILRSSNPDIDFSINQFSDMSENE 146

Query: 340 ILCKTGFKWS-ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
           +      K   ER ++       K   + M + +    P+  DWR         +Q ACG
Sbjct: 147 LKLILLDKKLLERNFQNSTL---KSFDLPMNLTR----PERIDWRDSGKVMSVKNQGACG 199

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLES 458
           SCWAF+    +E QYAI+ G L   S+ +LV+C  +  GCGG   L++ + +    GLE+
Sbjct: 200 SCWAFATVAAVESQYAIRKGTLWSLSEQELVDCDGESYGCGG-GFLDKALGWVLGNGLET 258

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLN--SHL 516
           E DYPY     +  +C  +  K ++   + +      +++   +   GP++  ++  +  
Sbjct: 259 EDDYPYECTQHD--QCYINGGKTRVTVDEGWSLGRDEDSIADWVASVGPVAFAMSVPNSF 316

Query: 517 IHFYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
             + NG     ++  C    LG HA+ L+GYG + + PYW+ +NSWG    D+G+ ++ R
Sbjct: 317 TAYSNGV-YNPSEHECRDESLGYHAMTLIGYGTEGNQPYWIVKNSWGSSWGDQGYMRLAR 375

Query: 576 GNNACGI 582
           GNNACG+
Sbjct: 376 GNNACGM 382



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 111/207 (53%), Gaps = 4/207 (1%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P+  DWR         +Q  CGSCWAF+    +E QYAI+ G L   S+ +LV+C  +  
Sbjct: 178 PERIDWRDSGKVMSVKNQGACGSCWAFATVAAVESQYAIRKGTLWSLSEQELVDCDGESY 237

Query: 72  GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           GC G F + ++ +    GLE+E DYPY+    +  +C  +  K ++   + +      ++
Sbjct: 238 GCGGGFLDKALGWVLGNGLETEDDYPYECTQHD--QCYINGGKTRVTVDEGWSLGRDEDS 295

Query: 132 MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYW 189
           +   +   GP++  ++  +    Y+      ++  C    LG HA+ L+GYG + N PYW
Sbjct: 296 IADWVASVGPVAFAMSVPNSFTAYSNGVYNPSEHECRDESLGYHAMTLIGYGTEGNQPYW 355

Query: 190 LVRNSWGPIGPDEGFFKIERGNNACGI 216
           +V+NSWG    D+G+ ++ RGNNACG+
Sbjct: 356 IVKNSWGSSWGDQGYMRLARGNNACGM 382


>gi|74834619|sp|O97397.1|CATLL_PHACE RecName: Full=Cathepsin L-like proteinase; Flags: Precursor
 gi|4210800|emb|CAA76927.1| thiol protease [Phaedon cochleariae]
          Length = 324

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 154/319 (48%), Gaps = 34/319 (10%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSP 703
           E +  F     R Y +  E K RF  F+    +  E                ++FSD + 
Sbjct: 21  ELWADFKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITD 80

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE               +  A R  +E + +     G  P++ DWR K V  P  +Q  C
Sbjct: 81  EEF---------RDMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGEC 131

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQAGL 821
           GSCWA S A  +E Q AIK+G  V  S  QLV+C+      GC+G F     EY    GL
Sbjct: 132 GSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYVKDNGL 191

Query: 822 ESEKDYPYKNANGEKFKC-AYDKSK-VKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLN 878
           ES+ DYPY   +G++ KC A DKS+ V   TG  +     SET +K+ +   GP+S ++ 
Sbjct: 192 ESDADYPY---SGKEDKCKANDKSRSVVELTG--YKKVTASETSLKEAVGTIGPISAVVF 246

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
              +  Y G     +D +C   +L H V +VGYG ++   YW+++N+WG    + G+ ++
Sbjct: 247 GKPMKSYGGGIF--DDSSCLGDNLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRL 304

Query: 939 ER-GNNACGIEQIAGYATI 956
            R  +++CG+E++A Y  +
Sbjct: 305 IRDTDHSCGVEKMASYPIL 323



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 126/223 (56%), Gaps = 13/223 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P++ DWR K V  P  +Q +CGSCWA S A  +E Q AIK+G  V  S  QLV+C+ 
Sbjct: 108 GAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCST 167

Query: 69  Q--CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKC-AYDKSK-VKLFTGKDFL 124
                GC+G F     EY    GLES+ DYPY   +G++ KC A DKS+ V   TG  + 
Sbjct: 168 SYGNHGCNGGFAVNGFEYVKDNGLESDADYPY---SGKEDKCKANDKSRSVVELTG--YK 222

Query: 125 HFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
               SET +K+ +   GP+S ++    +  Y G     +D +C   +L H V +VGYG +
Sbjct: 223 KVTASETSLKEAVGTIGPISAVVFGKPMKSYGGGIF--DDSSCLGDNLHHGVNVVGYGIE 280

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           +   YW+++N+WG    + G+ ++ R  +++CG+E++A Y  +
Sbjct: 281 NGQKYWIIKNTWGADWGESGYIRLIRDTDHSCGVEKMASYPIL 323



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 152/320 (47%), Gaps = 35/320 (10%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSP 337
           E +  F     R Y +  E K RF  F+    +  E                ++FSD + 
Sbjct: 21  ELWADFKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITD 80

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE               +  A R  +E + +     G  P++ DWR K V  P  +Q  C
Sbjct: 81  EEF---------RDMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGEC 131

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQAG 455
           GSCWA S A  +E Q AIK+G  V  S  QLV+C+    G  GC+G       EY    G
Sbjct: 132 GSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSY-GNHGCNGGFAVNGFEYVKDNG 190

Query: 456 LESEKDYPYRNGNGEKFKC-AYDKSK-VKLFTGKDFLYFNGSET-MKKILYKYGPLSVGL 512
           LES+ DYPY   +G++ KC A DKS+ V   TG  +     SET +K+ +   GP+S  +
Sbjct: 191 LESDADYPY---SGKEDKCKANDKSRSVVELTG--YKKVTASETSLKEAVGTIGPISAVV 245

Query: 513 NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
               +  Y G     +D +C   +L H V +VGYG ++   YW+ +N+WG    + G+ +
Sbjct: 246 FGKPMKSYGGGIF--DDSSCLGDNLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIR 303

Query: 573 IER-GNNACGIEQIAGYATI 591
           + R  +++CG+E++A Y  +
Sbjct: 304 LIRDTDHSCGVEKMASYPIL 323


>gi|340380717|ref|XP_003388868.1| PREDICTED: pro-cathepsin H-like [Amphimedon queenslandica]
          Length = 337

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 154/329 (46%), Gaps = 40/329 (12%)

Query: 650 DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSD 700
           D+E + E+F  ++ K  + Y+  EE  ER   +  +          H  H  Y  ++FSD
Sbjct: 27  DDEVMAESFNMWMKKYEKTYSTMEEYNERLRVYTSNYYYIEQLNKEHGPHTEYELNQFSD 86

Query: 701 RSPEEILCKTGFKWSERTY----ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
            +  E          ++ Y    +   A     +K +     +   P A DWR+KNV  P
Sbjct: 87  LTFAEF---------KKIYLTEPQHCSATNGNFQKPV-----NARDPVAVDWREKNVITP 132

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIE 814
             DQ  CGSCW FS  G LE  +AIKTG+L+  S+ QLV+CA   +  GC+G     + E
Sbjct: 133 VKDQGKCGSCWTFSTTGCLEAHHAIKTGQLISLSEQQLVDCAGAFNNHGCNGGLPSQAFE 192

Query: 815 YT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--NGSETMKKILYKYG 871
           Y  +  G+ESE +Y Y   +G    C ++ S V   T  D ++   +    +   +   G
Sbjct: 193 YIKYNGGIESESNYNYTAKDG---VCRFNSSLVAA-TVSDVVNITKDAEGDIGTAVANVG 248

Query: 872 PLSVLLN-SDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQD-NIPYWLVRNSWG 927
           P+S+    +     Y     +   E C  SP  + HAVL+VGY +      YW+V+NSW 
Sbjct: 249 PVSIAFEVTKSFQHYKKGVYQGEIEVCSQSPDKVNHAVLVVGYNQTKLGEEYWIVKNSWS 308

Query: 928 PIGPDEGFFKIERGNNACGIEQIAGYATI 956
                +G+F I RG+NACG+   A Y  +
Sbjct: 309 ASWGMDGYFWIRRGHNACGLATCASYPIV 337



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 153/330 (46%), Gaps = 41/330 (12%)

Query: 284 DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSD 334
           D+E + E+F  ++ K  + Y+  EE  ER   +  +          H  H  Y  ++FSD
Sbjct: 27  DDEVMAESFNMWMKKYEKTYSTMEEYNERLRVYTSNYYYIEQLNKEHGPHTEYELNQFSD 86

Query: 335 RSPEEILCKTGFKWSERTY----ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
            +  E          ++ Y    +   A     +K +     +   P A DWR+KNV  P
Sbjct: 87  LTFAEF---------KKIYLTEPQHCSATNGNFQKPV-----NARDPVAVDWREKNVITP 132

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIE 449
             DQ  CGSCW FS  G LE  +AIKTG+L+  S+ QLV+CA   +  G   GL  Q  E
Sbjct: 133 VKDQGKCGSCWTFSTTGCLEAHHAIKTGQLISLSEQQLVDCAGAFNNHGCNGGLPSQAFE 192

Query: 450 YT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF--NGSETMKKILYKYG 506
           Y  +  G+ESE +Y Y   +G    C ++ S V   T  D +    +    +   +   G
Sbjct: 193 YIKYNGGIESESNYNYTAKDG---VCRFNSSLVAA-TVSDVVNITKDAEGDIGTAVANVG 248

Query: 507 PLSVG--LNSHLIHFYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQD-DIPYWLARNSW 561
           P+S+   +     H+  G   +   E C  SP  + HAVL+VGY +      YW+ +NSW
Sbjct: 249 PVSIAFEVTKSFQHYKKGV-YQGEIEVCSQSPDKVNHAVLVVGYNQTKLGEEYWIVKNSW 307

Query: 562 GPIGPDEGFFKIERGNNACGIEQIAGYATI 591
                 +G+F I RG+NACG+   A Y  +
Sbjct: 308 SASWGMDGYFWIRRGHNACGLATCASYPIV 337



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 116/223 (52%), Gaps = 13/223 (5%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P A DWR+KNV  P  DQ  CGSCW FS  G LE  +AIKTG+L+  S+ QLV+CA   +
Sbjct: 119 PVAVDWREKNVITPVKDQGKCGSCWTFSTTGCLEAHHAIKTGQLISLSEQQLVDCAGAFN 178

Query: 72  --GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-- 126
             GC+G     + EY  +  G+ESE +Y Y   +G    C ++ S V   T  D ++   
Sbjct: 179 NHGCNGGLPSQAFEYIKYNGGIESESNYNYTAKDG---VCRFNSSLVAA-TVSDVVNITK 234

Query: 127 NGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQ 183
           +    +   +   GP+S+    +     Y     +   E C  SP  + HAVL+VGY + 
Sbjct: 235 DAEGDIGTAVANVGPVSIAFEVTKSFQHYKKGVYQGEIEVCSQSPDKVNHAVLVVGYNQT 294

Query: 184 D-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                YW+V+NSW      +G+F I RG+NACG+   A Y  +
Sbjct: 295 KLGEEYWIVKNSWSASWGMDGYFWIRRGHNACGLATCASYPIV 337


>gi|449673497|ref|XP_002169904.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 325

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 149/312 (47%), Gaps = 36/312 (11%)

Query: 663 VKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 722
           +   + Y+++ E   R+  +K + ++       +E++ +S   IL    F   + T    
Sbjct: 32  MAHNKAYSHESEENVRYAIWKDNMNR------ITEYNSKSKNVILRMNHF--GDMTNTEF 83

Query: 723 VADREKVEKMLMEVEKDGPV---------PDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 773
              R K+  +L+   ++G           PDA DWR +    P  +Q  CGSCWAFS  G
Sbjct: 84  ---RAKMNGLLLHKHQNGSTFLVPSHTAAPDAVDWRSEGYVTPVKNQGQCGSCWAFSSTG 140

Query: 774 MLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYK 830
            LEGQ+  KTG+LV  S+  LV+C+     +GC+G   + +  Y     G+++E  YPY+
Sbjct: 141 ALEGQHFKKTGRLVSLSEQNLVDCSTDYGNNGCNGGLMDNAFSYIKANGGIDTETGYPYE 200

Query: 831 NANGEKFKCAYDKSKVKLFTGKDFLHF-----NGSETMKKILYKYGPLSVLLNSDLIHDY 885
             +G    C Y KS +    G D   F        + +K+ +   GP+SV +++  +   
Sbjct: 201 GQDG---TCRYSKSSI----GADDTGFVDIPEGDEDALKQAVATVGPVSVAIDASHMSFQ 253

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NA 944
                  ++  CSP  L H VL+VGYG  +   YWLV+NSWG     EG+  + R N N 
Sbjct: 254 FYHSGVYDEPQCSPSALDHGVLVVGYGTDNGKDYWLVKNSWGTGWGTEGYIYMSRNNQNQ 313

Query: 945 CGIEQIAGYATI 956
           CGI   A Y  +
Sbjct: 314 CGIASKASYPLV 325



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 148/313 (47%), Gaps = 37/313 (11%)

Query: 297 VKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 356
           +   + Y+++ E   R+  +K + ++       +E++ +S   IL    F   + T    
Sbjct: 32  MAHNKAYSHESEENVRYAIWKDNMNR------ITEYNSKSKNVILRMNHF--GDMTNTEF 83

Query: 357 VADREKVEKMLMEVEKDGPV---------PDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 407
              R K+  +L+   ++G           PDA DWR +    P  +Q  CGSCWAFS  G
Sbjct: 84  ---RAKMNGLLLHKHQNGSTFLVPSHTAAPDAVDWRSEGYVTPVKNQGQCGSCWAFSSTG 140

Query: 408 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPY 464
            LEGQ+  KTG+LV  S+  LV+C+    G  GC+G  ++    Y     G+++E  YPY
Sbjct: 141 ALEGQHFKKTGRLVSLSEQNLVDCSTD-YGNNGCNGGLMDNAFSYIKANGGIDTETGYPY 199

Query: 465 RNGNGEKFKCAYDKSKVKLFTGKDFLYF-----NGSETMKKILYKYGPLSVGLNSHLIHF 519
               G+   C Y KS +    G D   F        + +K+ +   GP+SV +++  + F
Sbjct: 200 E---GQDGTCRYSKSSI----GADDTGFVDIPEGDEDALKQAVATVGPVSVAIDASHMSF 252

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGN-N 578
                   ++  CSP  L H VL+VGYG  +   YWL +NSWG     EG+  + R N N
Sbjct: 253 QFYHSGVYDEPQCSPSALDHGVLVVGYGTDNGKDYWLVKNSWGTGWGTEGYIYMSRNNQN 312

Query: 579 ACGIEQIAGYATI 591
            CGI   A Y  +
Sbjct: 313 QCGIASKASYPLV 325



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 116/230 (50%), Gaps = 16/230 (6%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           V      PDA DWR +    P  +Q  CGSCWAFS  G LEGQ+  KTG+LV  S+  LV
Sbjct: 103 VPSHTAAPDAVDWRSEGYVTPVKNQGQCGSCWAFSSTGALEGQHFKKTGRLVSLSEQNLV 162

Query: 65  ECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 121
           +C+     +GC+G   + +  Y     G+++E  YPY+  +G    C Y KS +    G 
Sbjct: 163 DCSTDYGNNGCNGGLMDNAFSYIKANGGIDTETGYPYEGQDG---TCRYSKSSI----GA 215

Query: 122 DFLHF-----NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 176
           D   F        + +K+ +   GP+SV +++  +          ++  CSP  L H VL
Sbjct: 216 DDTGFVDIPEGDEDALKQAVATVGPVSVAIDASHMSFQFYHSGVYDEPQCSPSALDHGVL 275

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           +VGYG  +   YWLV+NSWG     EG+  + R N N CGI   A Y  +
Sbjct: 276 VVGYGTDNGKDYWLVKNSWGTGWGTEGYIYMSRNNQNQCGIASKASYPLV 325



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 54/119 (45%), Gaps = 17/119 (14%)

Query: 923  RNSWGPIGPDE-GFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCS 966
            R S   IG D+ GF  I  G+     + +A    + V               V ++  CS
Sbjct: 207  RYSKSSIGADDTGFVDIPEGDEDALKQAVATVGPVSVAIDASHMSFQFYHSGVYDEPQCS 266

Query: 967  PYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
            P  L H VL+VGYG  +   YWLV+NSWG     EG+  + R N N CGI   A Y  +
Sbjct: 267  PSALDHGVLVVGYGTDNGKDYWLVKNSWGTGWGTEGYIYMSRNNQNQCGIASKASYPLV 325


>gi|29708|emb|CAA30428.1| cathepsin H [Homo sapiens]
          Length = 248

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 118/224 (52%), Gaps = 17/224 (7%)

Query: 740 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           GP P + DWRKK N   P  +Q ACGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 27  GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 86

Query: 799 KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 87  QDFNNYGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVA 142

Query: 856 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 909
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 143 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAV 199

Query: 910 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 200 GYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 243



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP P + DWRKK N   P  +Q  CGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 27  GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 86

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +  +  GC G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 87  QDFNNYGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVA 142

Query: 125 HFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLV 178
           +      E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL V
Sbjct: 143 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAV 199

Query: 179 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           GYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 200 GYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 243



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 115/226 (50%), Gaps = 20/226 (8%)

Query: 374 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           GP P + DWRKK N   P  +Q ACGSCW FS  G LE   AI TGK++  ++ QLV+CA
Sbjct: 27  GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA 86

Query: 433 KQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF- 489
           +  +  G   GL  Q  EY  +  G+  E  YPY+  +G    C +   K   F  KD  
Sbjct: 87  QDFNNYGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVA 142

Query: 490 -LYFNGSETMKKILYKYGPLSVGLN------SHLIHFYNGTPIRKNDETCSPYDLGHAVL 542
            +     E M + +  Y P+S           +    Y+ T   K     +P  + HAVL
Sbjct: 143 NITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHK-----TPDKVNHAVL 197

Query: 543 LVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
            VGYG+++ IPYW+ +NSWGP     G+F IERG N CG+   A Y
Sbjct: 198 AVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 243



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 188  TPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 243


>gi|226476122|emb|CAX72151.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 31/319 (9%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC+G + + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCEGGYMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSV-LLN 878
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SV ++ 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            D +  Y       ND  C   D+ H VL+VGYG +    YWL++NSWG +   +G+FK+
Sbjct: 254 VDSLIMYKSGVFESND--CKYGDINHGVLVVGYGNEHGKDYWLIKNSWGDLWGSKGYFKL 311

Query: 939 ERG-NNACGIEQIAGYATI 956
            R  +N CG+   A +  +
Sbjct: 312 RRNKHNMCGVASNASFPLL 330



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR         +Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSKWDWRDHGAVTAVKNQGMCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYG +  
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVAVDSLIMYKSGVFESND--CKYGDINHGVLVVGYGNEHG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 290 KDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 34/321 (10%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+    G  GC+G  ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP-YGNYGCEGGYMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN 513
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG+ 
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 514 S--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           +   LI + +G     ND  C   D+ H VL+VGYG +    YWL +NSWG +   +G+F
Sbjct: 253 AVDSLIMYKSGV-FESND--CKYGDINHGVLVVGYGNEHGKDYWLIKNSWGDLWGSKGYF 309

Query: 572 KIERG-NNACGIEQIAGYATI 591
           K+ R  +N CG+   A +  +
Sbjct: 310 KLRRNKHNMCGVASNASFPLL 330



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C   D+ H VL+VGYG +    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKYGDINHGVLVVGYGNEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|157132324|ref|XP_001655999.1| cathepsin l [Aedes aegypti]
 gi|108881694|gb|EAT45919.1| AAEL002833-PA [Aedes aegypti]
          Length = 339

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 162/329 (49%), Gaps = 34/329 (10%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFS 699
           E + E + AF ++  + Y ++ E + R + + Q+ HK  KH           R   ++++
Sbjct: 21  ELVKEEWNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYA 80

Query: 700 DRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPA 757
           D   EE +    GF    RT  +      ++E+ +  +E  +  VP   DWRKK    P 
Sbjct: 81  DLLHEEFVQTVNGFN---RTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPV 137

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEY 815
            DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ +   +GC+G   + + +Y
Sbjct: 138 KDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCNGGMMDYAFQY 197

Query: 816 TH-QAGLESEKDYPYKNAN-----GEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYK 869
                G+++EK YPY+  +       K   A DK  V +  G +       E +KK L  
Sbjct: 198 IKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYVDIPQGDE-------EALKKALAT 250

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGP 928
            GP+S+ +++        +     +  C   +L H VL VGYG  ++   YWLV+NSWG 
Sbjct: 251 VGPVSIAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGT 310

Query: 929 IGPDEGFFKIERG-NNACGIEQIAGYATI 956
              D+G+ K+ R  +N CG+   A Y  +
Sbjct: 311 TWGDQGYVKMARNRDNHCGVATCASYPLV 339



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 161/330 (48%), Gaps = 35/330 (10%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFS 333
           E + E + AF ++  + Y ++ E + R + + Q+ HK  KH           R   ++++
Sbjct: 21  ELVKEEWNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYA 80

Query: 334 DRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPA 391
           D   EE +    GF    RT  +      ++E+ +  +E  +  VP   DWRKK    P 
Sbjct: 81  DLLHEEFVQTVNGFN---RTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPV 137

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIE 449
            DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ +  G  GC+G  ++   +
Sbjct: 138 KDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGK-YGNNGCNGGMMDYAFQ 196

Query: 450 YTH-QAGLESEKDYPYRNGN-----GEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
           Y     G+++EK YPY   +       K   A DK  V +  G +       E +KK L 
Sbjct: 197 YIKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYVDIPQGDE-------EALKKALA 249

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWG 562
             GP+S+ +++    F   +     +  C   +L H VL VGYG  ++   YWL +NSWG
Sbjct: 250 TVGPVSIAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWG 309

Query: 563 PIGPDEGFFKIERG-NNACGIEQIAGYATI 591
               D+G+ K+ R  +N CG+   A Y  +
Sbjct: 310 TTWGDQGYVKMARNRDNHCGVATCASYPLV 339



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 17/225 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           VP   DWRKK    P  DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ + 
Sbjct: 122 VPTTVDWRKKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKY 181

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNAN-----GEKFKCAYDKSKVKLFTGKD 122
             +GC+G   + + +Y     G+++EK YPY+  +       K   A DK  V +  G +
Sbjct: 182 GNNGCNGGMMDYAFQYIKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYVDIPQGDE 241

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG- 181
                  E +KK L   GP+S+ +++        +     +  C   +L H VL VGYG 
Sbjct: 242 -------EALKKALATVGPVSIAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGT 294

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            ++   YWLV+NSWG    D+G+ K+ R  +N CG+   A Y  +
Sbjct: 295 SEEGEDYWLVKNSWGTTWGDQGYVKMARNRDNHCGVATCASYPLV 339



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 965  CSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYA 1022
            C   +L H VL VGYG  ++   YWLV+NSWG    D+G+ K+ R  +N CG+   A Y 
Sbjct: 278  CDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQGYVKMARNRDNHCGVATCASYP 337

Query: 1023 TI 1024
             +
Sbjct: 338  LV 339


>gi|114638622|ref|XP_001170363.1| PREDICTED: cathepsin W [Pan troglodytes]
          Length = 376

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 157/346 (45%), Gaps = 43/346 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  + I     V+ S  +L++C++   GC G F ++  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVQELLDCSRCGDGCQGGFVWDAFITVLNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIH 883
           KDYP++       +C + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLR 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN--------------------IPYWLVR 923
            Y    I+    TC P  + H+VLLVG+G   +                     PYW+++
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAERVSSQSQPQPPHPTPYWILK 330

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV--VKNDETCSP 967
           NSWG    ++G+F++ RG+N CGI +    A +    +K   +C P
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARVQKPDMKPRVSCPP 376



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 149/333 (44%), Gaps = 40/333 (12%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  + I     V+ S  +L++C++   GC G    +  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVQELLDCSRCGDGCQGGFVWDAFITVLNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSETMKKILYKYGPLSVGLNSHLIH 518
           KDYP++ G     +C + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLR 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDDIPYWLAR 558
            Y    I+    TC P  + H+VLLVG+G                         PYW+ +
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAERVSSQSQPQPPHPTPYWILK 330

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 120/243 (49%), Gaps = 25/243 (10%)

Query: 6   EKDGPVPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           E +  VP + DWRK      P  DQ +C  CWA + AG +E  + I     V+ S  +L+
Sbjct: 123 EPEESVPFSCDWRKVAGAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELL 182

Query: 65  ECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C++   GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF
Sbjct: 183 DCSRCGDGCQGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDF 240

Query: 124 LHF-NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +   N    + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G 
Sbjct: 241 IMLQNNEHRIAQYLATYGPITVTINMKPLRLYRKGVIKATPTTCDPQLVDHSVLLVGFGS 300

Query: 183 QDN--------------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
             +                     PYW+++NSWG    ++G+F++ RG+N CGI +    
Sbjct: 301 VKSEEGIWAERVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360

Query: 223 ATI 225
           A +
Sbjct: 361 ARV 363



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 20/81 (24%)

Query: 964  TCSPYDLGHAVLLVGYGK--------------------QDDIPYWLVRNSWGPIGPDEGF 1003
            TC P  + H+VLLVG+G                         PYW+++NSWG    ++G+
Sbjct: 283  TCDPQLVDHSVLLVGFGSVKSEEGIWAERVSSQSQPQPPHPTPYWILKNSWGAQWGEKGY 342

Query: 1004 FKIERGNNACGIEQIAGYATI 1024
            F++ RG+N CGI +    A +
Sbjct: 343  FRLHRGSNTCGITKFPLTARV 363


>gi|330434686|gb|AEC22811.1| cathepsin L [Macrobrachium nipponense]
          Length = 342

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 161/328 (49%), Gaps = 35/328 (10%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK------------KHERYGTSEFSDR 701
           ++E +++F  +  ++Y +D E   R + F ++  K            K  + G +++ D 
Sbjct: 25  VMEEWESFKFEHSKKYESDTEETFRMKIFAENKQKIAAHNKLYHTGSKTYKLGMNKYGDM 84

Query: 702 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
              E +    GF+ +  +     A+R       +E  +D  +P + DWR+K       DQ
Sbjct: 85  LHHEFVNMMNGFR-ANTSGAGYKANRGFQGAHFVEPPEDVVMPKSVDWREKGAVTEVKDQ 143

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTH- 817
            +CGSCWAFS  G LEGQ+  +TG LV  S+  LV+C+ +   +GC+G   + + +Y   
Sbjct: 144 GSCGSCWAFSATGALEGQHYRQTGDLVSLSEQNLVDCSSKFGNNGCNGGLMDNAFQYIKV 203

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF----NGSET-MKKILYKYGP 872
             G+++EK YPY+    E   C Y+ +      G D   F     G+E  +KK +   GP
Sbjct: 204 NGGIDTEKSYPYE---AEDEPCRYNPANA----GADDRGFVDVREGNENALKKAIATIGP 256

Query: 873 LSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPI 929
           +SV +++  D    Y       +D  CS  +L H VL VGYG  +D   YWLV+NSW   
Sbjct: 257 VSVAIDASQDSFQFYQHGVY--SDPDCSAENLDHGVLAVGYGTTEDGQDYWLVKNSWSKS 314

Query: 930 GPDEGFFKIERG-NNACGIEQIAGYATI 956
             D+G+ KI R  NN CGI   A Y  +
Sbjct: 315 WGDQGYIKIARNQNNMCGIASAASYPLV 342



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 158/327 (48%), Gaps = 32/327 (9%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK------------KHERYGTSEFSDR 335
           ++E +++F  +  ++Y +D E   R + F ++  K            K  + G +++ D 
Sbjct: 25  VMEEWESFKFEHSKKYESDTEETFRMKIFAENKQKIAAHNKLYHTGSKTYKLGMNKYGDM 84

Query: 336 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
              E +    GF+ +  +     A+R       +E  +D  +P + DWR+K       DQ
Sbjct: 85  LHHEFVNMMNGFR-ANTSGAGYKANRGFQGAHFVEPPEDVVMPKSVDWREKGAVTEVKDQ 143

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
            +CGSCWAFS  G LEGQ+  +TG LV  S+  LV+C+ +  G  GC+G  ++   +Y  
Sbjct: 144 GSCGSCWAFSATGALEGQHYRQTGDLVSLSEQNLVDCSSKF-GNNGCNGGLMDNAFQYIK 202

Query: 453 -QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF----NGSET-MKKILYKYG 506
              G+++EK YPY     E   C Y+ +      G D   F     G+E  +KK +   G
Sbjct: 203 VNGGIDTEKSYPYE---AEDEPCRYNPANA----GADDRGFVDVREGNENALKKAIATIG 255

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIG 565
           P+SV +++    F        +D  CS  +L H VL VGYG  +D   YWL +NSW    
Sbjct: 256 PVSVAIDASQDSFQFYQHGVYSDPDCSAENLDHGVLAVGYGTTEDGQDYWLVKNSWSKSW 315

Query: 566 PDEGFFKIERG-NNACGIEQIAGYATI 591
            D+G+ KI R  NN CGI   A Y  +
Sbjct: 316 GDQGYIKIARNQNNMCGIASAASYPLV 342



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/236 (36%), Positives = 123/236 (52%), Gaps = 21/236 (8%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
            +E  +D  +P + DWR+K       DQ  CGSCWAFS  G LEGQ+  +TG LV  S+ 
Sbjct: 116 FVEPPEDVVMPKSVDWREKGAVTEVKDQGSCGSCWAFSATGALEGQHYRQTGDLVSLSEQ 175

Query: 62  QLVECAKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
            LV+C+ +   +GC+G   + + +Y     G+++EK YPY+    E   C Y+ +     
Sbjct: 176 NLVDCSSKFGNNGCNGGLMDNAFQYIKVNGGIDTEKSYPYE---AEDEPCRYNPANA--- 229

Query: 119 TGKDFLHF----NGSET-MKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDL 171
            G D   F     G+E  +KK +   GP+SV +++  D    Y       +D  CS  +L
Sbjct: 230 -GADDRGFVDVREGNENALKKAIATIGPVSVAIDASQDSFQFYQHGVY--SDPDCSAENL 286

Query: 172 GHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            H VL VGYG  +D   YWLV+NSW     D+G+ KI R  NN CGI   A Y  +
Sbjct: 287 DHGVLAVGYGTTEDGQDYWLVKNSWSKSWGDQGYIKIARNQNNMCGIASAASYPLV 342



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 50/110 (45%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  +  GN     + IA    + V               V +D  CS  +L H VL 
Sbjct: 233  DRGFVDVREGNENALKKAIATIGPVSVAIDASQDSFQFYQHGVYSDPDCSAENLDHGVLA 292

Query: 977  VGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG  +D   YWLV+NSW     D+G+ KI R  NN CGI   A Y  +
Sbjct: 293  VGYGTTEDGQDYWLVKNSWSKSWGDQGYIKIARNQNNMCGIASAASYPLV 342


>gi|259016196|sp|P56202.2|CATW_HUMAN RecName: Full=Cathepsin W; AltName: Full=Lymphopain; Flags:
           Precursor
          Length = 376

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 157/346 (45%), Gaps = 43/346 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G       Y R       + + +   E +  VP + DWRK  +   P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVASAISPIKDQKNCNC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  + I     V+ S  +L++C +   GC G F ++  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIH 883
           KDYP++       +C + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQ 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN--------------------IPYWLVR 923
            Y    I+    TC P  + H+VLLVG+G   +                     PYW+++
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILK 330

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV--VKNDETCSP 967
           NSWG    ++G+F++ RG+N CGI +    A +    +K   +C P
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARVQKPDMKPRVSCPP 376



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 149/333 (44%), Gaps = 40/333 (12%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G       Y R       + + +   E +  VP + DWRK  +   P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVASAISPIKDQKNCNC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  + I     V+ S  +L++C +   GC G    +  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSETMKKILYKYGPLSVGLNSHLIH 518
           KDYP++ G     +C + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQ 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDDIPYWLAR 558
            Y    I+    TC P  + H+VLLVG+G                         PYW+ +
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILK 330

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 120/243 (49%), Gaps = 25/243 (10%)

Query: 6   EKDGPVPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           E +  VP + DWRK  +   P  DQ +C  CWA + AG +E  + I     V+ S  +L+
Sbjct: 123 EPEESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELL 182

Query: 65  ECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C +   GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF
Sbjct: 183 DCGRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDF 240

Query: 124 LHF-NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +   N    + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G 
Sbjct: 241 IMLQNNEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGS 300

Query: 183 QDN--------------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
             +                     PYW+++NSWG    ++G+F++ RG+N CGI +    
Sbjct: 301 VKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360

Query: 223 ATI 225
           A +
Sbjct: 361 ARV 363



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 20/81 (24%)

Query: 964  TCSPYDLGHAVLLVGYGK--------------------QDDIPYWLVRNSWGPIGPDEGF 1003
            TC P  + H+VLLVG+G                         PYW+++NSWG    ++G+
Sbjct: 283  TCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGY 342

Query: 1004 FKIERGNNACGIEQIAGYATI 1024
            F++ RG+N CGI +    A +
Sbjct: 343  FRLHRGSNTCGITKFPLTARV 363


>gi|21489677|gb|AAM55195.1|AF412313_1 cathepsin L cysteine protease [Haemonchus contortus]
 gi|21483192|gb|AAL14224.1| cathepsin L [Haemonchus contortus]
          Length = 354

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 124/226 (54%), Gaps = 19/226 (8%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
           +P++ DWR++ +  P  +Q  CGSCWAFS  G LEGQ+A  TGKLV  S+  LV+C+ + 
Sbjct: 137 IPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEGQHARATGKLVSLSEQNLVDCSTKY 196

Query: 801 -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 857
              GC+G   + + EY  +  G+++E  YPY    G + KC + ++ V     K F+   
Sbjct: 197 GNHGCNGGLMDLAFEYIKENHGVDTEDSYPYV---GRETKCHFKRNAVGA-DDKGFVDLP 252

Query: 858 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETCSPYDLGHAVLLVGYG 912
               E +KK +   GP+S+ +++     +    + K     DE CS  +L H VLLVGYG
Sbjct: 253 EGDEEALKKAVATQGPISIAIDA----GHRSFQLYKKGVYFDEECSSEELDHGVLLVGYG 308

Query: 913 KQDNI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
                  YWLV+NSWGP   ++G+ +I R  NN CG+   A Y  +
Sbjct: 309 TDPEAGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGVATKASYPLV 354



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 124/226 (54%), Gaps = 19/226 (8%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P++ DWR++ +  P  +Q  CGSCWAFS  G LEGQ+A  TGKLV  S+  LV+C+ + 
Sbjct: 137 IPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEGQHARATGKLVSLSEQNLVDCSTKY 196

Query: 70  -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
              GC+G   + + EY  +  G+++E  YPY    G + KC + ++ V     K F+   
Sbjct: 197 GNHGCNGGLMDLAFEYIKENHGVDTEDSYPYV---GRETKCHFKRNAVGA-DDKGFVDLP 252

Query: 127 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETCSPYDLGHAVLLVGYG 181
               E +KK +   GP+S+ +++     +    + K     DE CS  +L H VLLVGYG
Sbjct: 253 EGDEEALKKAVATQGPISIAIDA----GHRSFQLYKKGVYFDEECSSEELDHGVLLVGYG 308

Query: 182 KQDNI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
                  YWLV+NSWGP   ++G+ +I R  NN CG+   A Y  +
Sbjct: 309 TDPEAGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGVATKASYPLV 354



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 123/223 (55%), Gaps = 12/223 (5%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P++ DWR++ +  P  +Q  CGSCWAFS  G LEGQ+A  TGKLV  S+  LV+C+ + 
Sbjct: 137 IPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEGQHARATGKLVSLSEQNLVDCSTK- 195

Query: 436 SGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            G  GC+G  ++   EY  +  G+++E  YPY    G + KC + ++ V     K F+  
Sbjct: 196 YGNHGCNGGLMDLAFEYIKENHGVDTEDSYPYV---GRETKCHFKRNAVGA-DDKGFVDL 251

Query: 493 --NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                E +KK +   GP+S+ +++    F         DE CS  +L H VLLVGYG   
Sbjct: 252 PEGDEEALKKAVATQGPISIAIDAGHRSFQLYKKGVYFDEECSSEELDHGVLLVGYGTDP 311

Query: 551 DI-PYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           +   YWL +NSWGP   ++G+ +I R  NN CG+   A Y  +
Sbjct: 312 EAGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGVATKASYPLV 354



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 6/103 (5%)

Query: 928  PIGPDEGFFKIERGNNACGIEQIAGYATIDVVKN----DETCSPYDLGHAVLLVGYGKQD 983
            P G +E   K         I   AG+ +  + K     DE CS  +L H VLLVGYG   
Sbjct: 252  PEGDEEALKKAVATQGPISIAIDAGHRSFQLYKKGVYFDEECSSEELDHGVLLVGYGTDP 311

Query: 984  DI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            +   YWLV+NSWGP   ++G+ +I R  NN CG+   A Y  +
Sbjct: 312  EAGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGVATKASYPLV 354


>gi|397516975|ref|XP_003828695.1| PREDICTED: cathepsin W [Pan paniscus]
          Length = 376

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 157/346 (45%), Gaps = 43/346 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  + I     V+ S  +L++C++   GC G F ++  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVQELLDCSRCGDGCQGGFVWDAFITVLNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIH 883
           KDYP++       +C + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLR 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN--------------------IPYWLVR 923
            Y    I+    TC P  + H+VLLVG+G   +                     PYW+++
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILK 330

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV--VKNDETCSP 967
           NSWG    ++G+F++ RG+N CGI +    A +    +K   +C P
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARVQKPDMKPRVSCPP 376



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 149/333 (44%), Gaps = 40/333 (12%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  + I     V+ S  +L++C++   GC G    +  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVQELLDCSRCGDGCQGGFVWDAFITVLNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSETMKKILYKYGPLSVGLNSHLIH 518
           KDYP++ G     +C + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLR 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDDIPYWLAR 558
            Y    I+    TC P  + H+VLLVG+G                         PYW+ +
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILK 330

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 120/243 (49%), Gaps = 25/243 (10%)

Query: 6   EKDGPVPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           E +  VP + DWRK      P  DQ +C  CWA + AG +E  + I     V+ S  +L+
Sbjct: 123 EPEESVPFSCDWRKVAGAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELL 182

Query: 65  ECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C++   GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF
Sbjct: 183 DCSRCGDGCQGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDF 240

Query: 124 LHF-NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +   N    + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G 
Sbjct: 241 IMLQNNEHRIAQYLATYGPITVTINMKPLRLYRKGVIKATPTTCDPQLVDHSVLLVGFGS 300

Query: 183 QDN--------------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
             +                     PYW+++NSWG    ++G+F++ RG+N CGI +    
Sbjct: 301 VKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360

Query: 223 ATI 225
           A +
Sbjct: 361 ARV 363



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 20/81 (24%)

Query: 964  TCSPYDLGHAVLLVGYGK--------------------QDDIPYWLVRNSWGPIGPDEGF 1003
            TC P  + H+VLLVG+G                         PYW+++NSWG    ++G+
Sbjct: 283  TCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGY 342

Query: 1004 FKIERGNNACGIEQIAGYATI 1024
            F++ RG+N CGI +    A +
Sbjct: 343  FRLHRGSNTCGITKFPLTARV 363


>gi|226476108|emb|CAX72144.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 31/319 (9%)

Query: 656 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 703
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWRLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 762
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGM 136

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAG 820
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+      GC+G + + +  Y     
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTPYGNYGCEGGYMDHAFNYLESHY 196

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSV-LLN 878
           +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SV ++ 
Sbjct: 197 IESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIVA 253

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
            D +  Y       ND  C    + H VL+VGYGK+    YWL++NSWG +   +G+FK+
Sbjct: 254 LDSLIMYKSGVFESND--CKYAGINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKL 311

Query: 939 ERG-NNACGIEQIAGYATI 956
            R  +N CG+   A +  +
Sbjct: 312 RRNKHNMCGVASNASFPLL 330



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 34/321 (10%)

Query: 290 ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 337
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWRLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 396
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGM 136

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQA 454
           CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+    G  GC+G  ++    Y    
Sbjct: 137 CGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP-YGNYGCEGGYMDHAFNYLESH 195

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF-LYFNGSETMKKILYKYGPLSVGLN 513
            +ESE DY Y    G    C Y KSK  +   K   L     +T++K +Y+YGP+SVG+ 
Sbjct: 196 YIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPSKDEKTLQKAVYQYGPISVGIV 252

Query: 514 S--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           +   LI + +G     ND  C    + H VL+VGYGK+    YWL +NSWG +   +G+F
Sbjct: 253 ALDSLIMYKSGV-FESND--CKYAGINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYF 309

Query: 572 KIERG-NNACGIEQIAGYATI 591
           K+ R  +N CG+   A +  +
Sbjct: 310 KLRRNKHNMCGVASNASFPLL 330



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVP  WDWR         +Q  CGSCWAFS  G +EGQ   K  KL+  S+ QLV+C+  
Sbjct: 115 PVPSTWDWRDHGAVTAVKNQGMCGSCWAFSATGAIEGQLRRKHKKLISLSEQQLVDCSTP 174

Query: 70  CS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 126
               GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L  
Sbjct: 175 YGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLPS 231

Query: 127 NGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
              +T++K +Y+YGP+SV ++  D +  Y       ND  C    + H VL+VGYGK+  
Sbjct: 232 KDEKTLQKAVYQYGPISVGIVALDSLIMYKSGVFESND--CKYAGINHGVLVVGYGKEHG 289

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 290 KDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            C    + H VL+VGYGK+    YWL++NSWG +   +G+FK+ R  +N CG+   A +  
Sbjct: 270  CKYAGINHGVLVVGYGKEHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPL 329

Query: 1024 I 1024
            +
Sbjct: 330  L 330


>gi|91992508|gb|ABE72970.1| cathepsin L [Aedes aegypti]
          Length = 339

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 162/329 (49%), Gaps = 34/329 (10%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFS 699
           E + E + AF ++  + Y ++ E + R + + Q+ HK  KH           R   ++++
Sbjct: 21  ELVKEEWNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYA 80

Query: 700 DRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPA 757
           D   EE +    GF    RT  +      ++E+ +  +E  +  VP   DWRKK    P 
Sbjct: 81  DLLHEEFVQTVNGFN---RTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPV 137

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEY 815
            DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ +   +GC+G   + + +Y
Sbjct: 138 KDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCNGGMMDYAFQY 197

Query: 816 TH-QAGLESEKDYPYKNAN-----GEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYK 869
                G+++EK YPY+  +       K   A DK  V +  G +       E +KK L  
Sbjct: 198 IKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYVDIPQGDE-------EALKKALAT 250

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGP 928
            GP+S+ +++        +     +  C   +L H VL VGYG  ++   YWLV+NSWG 
Sbjct: 251 VGPVSIAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGT 310

Query: 929 IGPDEGFFKIERG-NNACGIEQIAGYATI 956
              D+G+ K+ R  +N CG+   A Y  +
Sbjct: 311 TWGDQGYVKMARNHDNHCGVATCASYPLV 339



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 161/330 (48%), Gaps = 35/330 (10%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFS 333
           E + E + AF ++  + Y ++ E + R + + Q+ HK  KH           R   ++++
Sbjct: 21  ELVKEEWNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYA 80

Query: 334 DRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPA 391
           D   EE +    GF    RT  +      ++E+ +  +E  +  VP   DWRKK    P 
Sbjct: 81  DLLHEEFVQTVNGFN---RTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPV 137

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIE 449
            DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ +  G  GC+G  ++   +
Sbjct: 138 KDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGK-YGNNGCNGGMMDYAFQ 196

Query: 450 YTH-QAGLESEKDYPYRNGN-----GEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILY 503
           Y     G+++EK YPY   +       K   A DK  V +  G +       E +KK L 
Sbjct: 197 YIKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYVDIPQGDE-------EALKKALA 249

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWG 562
             GP+S+ +++    F   +     +  C   +L H VL VGYG  ++   YWL +NSWG
Sbjct: 250 TVGPVSIAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWG 309

Query: 563 PIGPDEGFFKIERG-NNACGIEQIAGYATI 591
               D+G+ K+ R  +N CG+   A Y  +
Sbjct: 310 TTWGDQGYVKMARNHDNHCGVATCASYPLV 339



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 17/225 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           VP   DWRKK    P  DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ + 
Sbjct: 122 VPTTVDWRKKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKY 181

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNAN-----GEKFKCAYDKSKVKLFTGKD 122
             +GC+G   + + +Y     G+++EK YPY+  +       K   A DK  V +  G +
Sbjct: 182 GNNGCNGGMMDYAFQYIKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYVDIPQGDE 241

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG- 181
                  E +KK L   GP+S+ +++        +     +  C   +L H VL VGYG 
Sbjct: 242 -------EALKKALATVGPVSIAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGT 294

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            ++   YWLV+NSWG    D+G+ K+ R  +N CG+   A Y  +
Sbjct: 295 SEEGEDYWLVKNSWGTTWGDQGYVKMARNHDNHCGVATCASYPLV 339



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 965  CSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYA 1022
            C   +L H VL VGYG  ++   YWLV+NSWG    D+G+ K+ R  +N CG+   A Y 
Sbjct: 278  CDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQGYVKMARNHDNHCGVATCASYP 337

Query: 1023 TI 1024
             +
Sbjct: 338  LV 339


>gi|189528132|ref|XP_695717.3| PREDICTED: cathepsin O [Danio rerio]
          Length = 334

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 135/260 (51%), Gaps = 17/260 (6%)

Query: 692 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           +YG ++FS       L +  FK    T     A +    K  ++V+ + P    +DWR  
Sbjct: 79  QYGVNQFS------YLSQKQFKEQYLTARAEAAPKFDQSKSEIKVKANNP--PRFDWRDH 130

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
            V GP  +Q +CG CWAFSI   +E   A    KL + S  Q+++C+ Q  GC+G     
Sbjct: 131 GVVGPVHNQGSCGGCWAFSIVEAIESVSAKGGEKLQQLSVQQVIDCSYQNQGCNGGSPVE 190

Query: 812 SIEYTHQAGLE--SEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 867
           ++ +  Q+ L+  SE +YP+K A+G  + F  A+    V+ ++  DF      E M   L
Sbjct: 191 ALYWLTQSKLKLVSEAEYPFKGADGVCQFFPQAHAGVAVRNYSAYDFS--GQEEVMMSAL 248

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927
             +GPL V++++    DY G  I+ +   CS +   HAVL+ GY     +PYW+VRNSWG
Sbjct: 249 VDFGPLVVIVDAISWQDYLGGIIQHH---CSSHKANHAVLITGYDTTGEVPYWIVRNSWG 305

Query: 928 PIGPDEGFFKIERGNNACGI 947
               D+G+  I+ GN+ CG+
Sbjct: 306 TSWGDDGYAYIKIGNDVCGV 325



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 117/217 (53%), Gaps = 9/217 (4%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           E++     P  +DWR   V GP  +Q  CG CWAFSI   +E   A    KL + S  Q+
Sbjct: 114 EIKVKANNPPRFDWRDHGVVGPVHNQGSCGGCWAFSIVEAIESVSAKGGEKLQQLSVQQV 173

Query: 64  VECAKQCSGCDGCFFEPSIEYTHQAGLE--SEKDYPYKNANG--EKFKCAYDKSKVKLFT 119
           ++C+ Q  GC+G     ++ +  Q+ L+  SE +YP+K A+G  + F  A+    V+ ++
Sbjct: 174 IDCSYQNQGCNGGSPVEALYWLTQSKLKLVSEAEYPFKGADGVCQFFPQAHAGVAVRNYS 233

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
             DF      E M   L  +GPL V++++    DY G  I+ +   CS +   HAVL+ G
Sbjct: 234 AYDFS--GQEEVMMSALVDFGPLVVIVDAISWQDYLGGIIQHH---CSSHKANHAVLITG 288

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           Y     +PYW+VRNSWG    D+G+  I+ GN+ CG+
Sbjct: 289 YDTTGEVPYWIVRNSWGTSWGDDGYAYIKIGNDVCGV 325



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 129/260 (49%), Gaps = 16/260 (6%)

Query: 326 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           +YG ++FS       L +  FK    T     A +    K  ++V+ + P    +DWR  
Sbjct: 79  QYGVNQFS------YLSQKQFKEQYLTARAEAAPKFDQSKSEIKVKANNP--PRFDWRDH 130

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
            V GP  +Q +CG CWAFSI   +E   A    KL + S  Q+++C+ Q  GC G   +E
Sbjct: 131 GVVGPVHNQGSCGGCWAFSIVEAIESVSAKGGEKLQQLSVQQVIDCSYQNQGCNGGSPVE 190

Query: 446 QPIEYTH-QAGLESEKDYPYRNGNG--EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKIL 502
                T  +  L SE +YP++  +G  + F  A+    V+ ++  DF      E M   L
Sbjct: 191 ALYWLTQSKLKLVSEAEYPFKGADGVCQFFPQAHAGVAVRNYSAYDFS--GQEEVMMSAL 248

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWG 562
             +GPL V +++     Y G  I+ +   CS +   HAVL+ GY    ++PYW+ RNSWG
Sbjct: 249 VDFGPLVVIVDAISWQDYLGGIIQHH---CSSHKANHAVLITGYDTTGEVPYWIVRNSWG 305

Query: 563 PIGPDEGFFKIERGNNACGI 582
               D+G+  I+ GN+ CG+
Sbjct: 306 TSWGDDGYAYIKIGNDVCGV 325



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS +   HAVL+ GY    ++PYW+VRNSWG    D+G+  I+ GN+ CG+
Sbjct: 275  CSSHKANHAVLITGYDTTGEVPYWIVRNSWGTSWGDDGYAYIKIGNDVCGV 325


>gi|391339556|ref|XP_003744114.1| PREDICTED: counting factor associated protein D-like [Metaseiulus
           occidentalis]
          Length = 563

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 53/376 (14%)

Query: 255 LCLPSLTDRITDQVVARVDTLAIEGS-LTFDNENILETFKAFIVKRGRQYANDEEIKERF 313
           +   S T    D  V  V  +A  G  + +   + L +   F   R   + ++  + E F
Sbjct: 201 MIYTSYTTGAQDATVFDVVKVAAAGRCVPYPEGSGLSSGHLFNPMRVFIHRDESHVDEHF 260

Query: 314 EYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI-------------VADR 360
           E+FK+   K++E          +  E L K  F+ ++R  + +             +AD 
Sbjct: 261 EHFKKQHSKRYED---------ADNEKLRKDNFRNNQRYIDSMNRKNKDFKLRINHLADL 311

Query: 361 EKVEKMLMEVEK--DGP---------------VPDAWDWRKKNVTGPAGDQAACGSCWAF 403
            + E   +   K   GP               +PD+ DW+ + V     DQA CGSCW+F
Sbjct: 312 HQDEMKFLRGRKYVAGPNGGKVFPAENFIGRELPDSVDWKPRGVVTEVKDQAICGSCWSF 371

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE--QPIEYTHQAGLESEKD 461
              G +EG YA K GKLV FS+ QL++C+ +  G GGCDG +  Q  +Y  Q GL ++K+
Sbjct: 372 GATGNIEGMYARKHGKLVRFSEQQLIDCSWKF-GNGGCDGGQDYQAYQYIMQHGLSTDKE 430

Query: 462 Y-PYRNGNGEKFKCAYDKSKVK--LFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHL-- 516
           Y  Y   +G   KC +D   +K  L T   ++   G   +K+ +   GP+SVG+ + L  
Sbjct: 431 YGAYMGIDG---KC-HDGPALKRELPTLLGYVNVTGENDLKRAVAFVGPISVGIFAALPS 486

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIPYWLARNSWGPIGPDEGFFKIER 575
           + FY+       D      DL HAVL VGYG   +   +W+ +NSW  +  D+G+ KI  
Sbjct: 487 LSFYHTGIFNDKDCKNGLADLDHAVLAVGYGVSHEGEAFWIVKNSWSTLWGDDGYVKIAM 546

Query: 576 GNNACGIEQIAGYATI 591
            NN CG+   A YA +
Sbjct: 547 KNNICGVTTAATYALV 562



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 172/375 (45%), Gaps = 52/375 (13%)

Query: 621 LCLPSLTDRITDQVVARVDTLAIEGS-LTFDNENILETFKAFIVKRGRQYANDEEIKERF 679
           +   S T    D  V  V  +A  G  + +   + L +   F   R   + ++  + E F
Sbjct: 201 MIYTSYTTGAQDATVFDVVKVAAAGRCVPYPEGSGLSSGHLFNPMRVFIHRDESHVDEHF 260

Query: 680 EYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI-------------VADR 726
           E+FK+   K++E          +  E L K  F+ ++R  + +             +AD 
Sbjct: 261 EHFKKQHSKRYED---------ADNEKLRKDNFRNNQRYIDSMNRKNKDFKLRINHLADL 311

Query: 727 EKVEKMLMEVEK--DGP---------------VPDAWDWRKKNVTGPAGDQAACGSCWAF 769
            + E   +   K   GP               +PD+ DW+ + V     DQA CGSCW+F
Sbjct: 312 HQDEMKFLRGRKYVAGPNGGKVFPAENFIGRELPDSVDWKPRGVVTEVKDQAICGSCWSF 371

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDY 827
              G +EG YA K GKLV FS+ QL++C+ +    GCDG     + +Y  Q GL ++K+Y
Sbjct: 372 GATGNIEGMYARKHGKLVRFSEQQLIDCSWKFGNGGCDGGQDYQAYQYIMQHGLSTDKEY 431

Query: 828 -PYKNANGEKFKCAYDKSKVK--LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL--I 882
             Y   +G   KC +D   +K  L T   +++  G   +K+ +   GP+SV + + L  +
Sbjct: 432 GAYMGIDG---KC-HDGPALKRELPTLLGYVNVTGENDLKRAVAFVGPISVGIFAALPSL 487

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
             Y+       D      DL HAVL VGYG   +   +W+V+NSW  +  D+G+ KI   
Sbjct: 488 SFYHTGIFNDKDCKNGLADLDHAVLAVGYGVSHEGEAFWIVKNSWSTLWGDDGYVKIAMK 547

Query: 942 NNACGIEQIAGYATI 956
           NN CG+   A YA +
Sbjct: 548 NNICGVTTAATYALV 562



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 121/223 (54%), Gaps = 12/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD+ DW+ + V     DQA CGSCW+F   G +EG YA K GKLV FS+ QL++C+ + 
Sbjct: 344 LPDSVDWKPRGVVTEVKDQAICGSCWSFGATGNIEGMYARKHGKLVRFSEQQLIDCSWKF 403

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDY-PYKNANGEKFKCAYDKSKVK--LFTGKDFLH 125
              GCDG     + +Y  Q GL ++K+Y  Y   +G   KC +D   +K  L T   +++
Sbjct: 404 GNGGCDGGQDYQAYQYIMQHGLSTDKEYGAYMGIDG---KC-HDGPALKRELPTLLGYVN 459

Query: 126 FNGSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-K 182
             G   +K+ +   GP+SV + + L  +  Y+       D      DL HAVL VGYG  
Sbjct: 460 VTGENDLKRAVAFVGPISVGIFAALPSLSFYHTGIFNDKDCKNGLADLDHAVLAVGYGVS 519

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +   +W+V+NSW  +  D+G+ KI   NN CG+   A YA +
Sbjct: 520 HEGEAFWIVKNSWSTLWGDDGYVKIAMKNNICGVTTAATYALV 562



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)

Query: 959  VKNDETCSP--YDLGHAVLLVGYG-KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            + ND+ C     DL HAVL VGYG   +   +W+V+NSW  +  D+G+ KI   NN CG+
Sbjct: 494  IFNDKDCKNGLADLDHAVLAVGYGVSHEGEAFWIVKNSWSTLWGDDGYVKIAMKNNICGV 553

Query: 1016 EQIAGYATI 1024
               A YA +
Sbjct: 554  TTAATYALV 562


>gi|195056367|ref|XP_001995082.1| GH22826 [Drosophila grimshawi]
 gi|193899288|gb|EDV98154.1| GH22826 [Drosophila grimshawi]
          Length = 340

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 172/344 (50%), Gaps = 29/344 (8%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE 691
           + A +  +A+  +++F +  I E ++ F ++  +QY ++ E + R + F ++ HK  KH 
Sbjct: 5   IFALLALVAVAQAVSFADV-IKEEWQTFKLEHRKQYQDETEERFRLKIFNENKHKIAKHN 63

Query: 692 ----------RYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDG 740
                     + G ++++D    E      GF ++   ++++ A       +     +  
Sbjct: 64  QLYAAGEVSFKMGLNKYADMLHHEFHETMNGFNYT--LHKQLRASDATFTGVTFISPEHV 121

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
            +P + DWR K       DQ  CGSCWAFS  G LEGQ+  KTG L+  S+  LV+C+ +
Sbjct: 122 KLPQSVDWRNKGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKTGTLISLSEQNLVDCSTK 181

Query: 801 --CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
              +GC+G   + +  Y     G+++EK YPY+   G    C ++K  +   T + F   
Sbjct: 182 YGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYE---GIDDSCHFNKGTIGA-TDRGFTDI 237

Query: 858 -NGSE-TMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
             G E  + + +   GP+SV ++ S     +  T +  ++  C P +L H VL+VGYG  
Sbjct: 238 PQGDEKKLAQAVATIGPVSVAIDASHESFQFYSTGVY-DEPQCDPQNLDHGVLVVGYGTD 296

Query: 915 DN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +N   YWLV+NSWG    D+GF K+ R  +N CGI   + Y  +
Sbjct: 297 ENGKDYWLVKNSWGTTWGDKGFIKMARNDDNQCGIATASSYPLV 340



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 169/344 (49%), Gaps = 28/344 (8%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE 325
           + A +  +A+  +++F +  I E ++ F ++  +QY ++ E + R + F ++ HK  KH 
Sbjct: 5   IFALLALVAVAQAVSFADV-IKEEWQTFKLEHRKQYQDETEERFRLKIFNENKHKIAKHN 63

Query: 326 ----------RYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDG 374
                     + G ++++D    E      GF ++   ++++ A       +     +  
Sbjct: 64  QLYAAGEVSFKMGLNKYADMLHHEFHETMNGFNYT--LHKQLRASDATFTGVTFISPEHV 121

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
            +P + DWR K       DQ  CGSCWAFS  G LEGQ+  KTG L+  S+  LV+C+ +
Sbjct: 122 KLPQSVDWRNKGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKTGTLISLSEQNLVDCSTK 181

Query: 435 CSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY 491
             G  GC+G  ++    Y     G+++EK YPY    G    C ++K  +   T + F  
Sbjct: 182 Y-GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYE---GIDDSCHFNKGTIGA-TDRGFTD 236

Query: 492 F-NGSE-TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
              G E  + + +   GP+SV +++    F   +    ++  C P +L H VL+VGYG  
Sbjct: 237 IPQGDEKKLAQAVATIGPVSVAIDASHESFQFYSTGVYDEPQCDPQNLDHGVLVVGYGTD 296

Query: 550 DD-IPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           ++   YWL +NSWG    D+GF K+ R  +N CGI   + Y  +
Sbjct: 297 ENGKDYWLVKNSWGTTWGDKGFIKMARNDDNQCGIATASSYPLV 340



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 119/223 (53%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P + DWR K       DQ  CGSCWAFS  G LEGQ+  KTG L+  S+  LV+C+ + 
Sbjct: 123 LPQSVDWRNKGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKTGTLISLSEQNLVDCSTKY 182

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + +  Y     G+++EK YPY+   G    C ++K  +   T + F    
Sbjct: 183 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYE---GIDDSCHFNKGTIGA-TDRGFTDIP 238

Query: 127 NGSE-TMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
            G E  + + +   GP+SV ++ S     +  T +  ++  C P +L H VL+VGYG  +
Sbjct: 239 QGDEKKLAQAVATIGPVSVAIDASHESFQFYSTGVY-DEPQCDPQNLDHGVLVVGYGTDE 297

Query: 185 N-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           N   YWLV+NSWG    D+GF K+ R  +N CGI   + Y  +
Sbjct: 298 NGKDYWLVKNSWGTTWGDKGFIKMARNDDNQCGIATASSYPLV 340



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 18/116 (15%)

Query: 927  GPIGP-DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDL 970
            G IG  D GF  I +G+     + +A    + V               V ++  C P +L
Sbjct: 225  GTIGATDRGFTDIPQGDEKKLAQAVATIGPVSVAIDASHESFQFYSTGVYDEPQCDPQNL 284

Query: 971  GHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
             H VL+VGYG  ++   YWLV+NSWG    D+GF K+ R  +N CGI   + Y  +
Sbjct: 285  DHGVLVVGYGTDENGKDYWLVKNSWGTTWGDKGFIKMARNDDNQCGIATASSYPLV 340


>gi|357627452|gb|EHJ77132.1| cathepsin L-like protease [Danaus plexippus]
          Length = 341

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 30/326 (9%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 701
           + E +  F ++  +QY ++ E K R + + ++ HK  KH           R  T+++SD 
Sbjct: 23  VREEWNTFKLEHKKQYDSETEEKFRMKIYAENKHKVAKHNQRYQKGLVSYRLKTNKYSDM 82

Query: 702 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
              E +    GF  + +  + + A    +         +   P   DWR+     P  DQ
Sbjct: 83  LHHEFVNTMNGFNKTVKHNKGLYAKGNDIRGATFVSPANVAAPPTVDWRQHGAVTPVKDQ 142

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH- 817
             CGSCW+FS  G LEGQ+  K+G LV  S+  L++C+     +GC+G   + + +Y   
Sbjct: 143 GKCGSCWSFSTTGALEGQHFRKSGFLVSLSEQNLIDCSSAYGNNGCNGGLMDNAFKYIKD 202

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-----NGSETMKKILYKYGP 872
             G+++EK YPY+  +    KC Y+       +G + + F          +   L   GP
Sbjct: 203 NDGIDTEKTYPYEAVDD---KCRYNPKN----SGAEDVGFVDIPAGDEHKLMLALATVGP 255

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK-QDNIPYWLVRNSWGPIGP 931
           +SV +++        +     DE CS  +L H VL+VGYG  +D   YWLV+NSWGP   
Sbjct: 256 VSVAIDASQESFQLYSDGVYYDENCSSENLDHGVLVVGYGTDEDGGDYWLVKNSWGPSWG 315

Query: 932 DEGFFKIERG-NNACGIEQIAGYATI 956
           DEG+ K+ R  +N CGI   A Y  +
Sbjct: 316 DEGYIKMARNRDNHCGIASSASYPLV 341



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 154/327 (47%), Gaps = 31/327 (9%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 335
           + E +  F ++  +QY ++ E K R + + ++ HK  KH           R  T+++SD 
Sbjct: 23  VREEWNTFKLEHKKQYDSETEEKFRMKIYAENKHKVAKHNQRYQKGLVSYRLKTNKYSDM 82

Query: 336 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
              E +    GF  + +  + + A    +         +   P   DWR+     P  DQ
Sbjct: 83  LHHEFVNTMNGFNKTVKHNKGLYAKGNDIRGATFVSPANVAAPPTVDWRQHGAVTPVKDQ 142

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCW+FS  G LEGQ+  K+G LV  S+  L++C+    G  GC+G  ++   +Y  
Sbjct: 143 GKCGSCWSFSTTGALEGQHFRKSGFLVSLSEQNLIDCS-SAYGNNGCNGGLMDNAFKYIK 201

Query: 453 -QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-----NGSETMKKILYKYG 506
              G+++EK YPY   +    KC Y+       +G + + F          +   L   G
Sbjct: 202 DNDGIDTEKTYPYEAVDD---KCRYNPKN----SGAEDVGFVDIPAGDEHKLMLALATVG 254

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIG 565
           P+SV +++    F   +     DE CS  +L H VL+VGYG  +D   YWL +NSWGP  
Sbjct: 255 PVSVAIDASQESFQLYSDGVYYDENCSSENLDHGVLVVGYGTDEDGGDYWLVKNSWGPSW 314

Query: 566 PDEGFFKIERG-NNACGIEQIAGYATI 591
            DEG+ K+ R  +N CGI   A Y  +
Sbjct: 315 GDEGYIKMARNRDNHCGIASSASYPLV 341



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 115/225 (51%), Gaps = 17/225 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
            P   DWR+     P  DQ  CGSCW+FS  G LEGQ+  K+G LV  S+  L++C+   
Sbjct: 124 APPTVDWRQHGAVTPVKDQGKCGSCWSFSTTGALEGQHFRKSGFLVSLSEQNLIDCSSAY 183

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + + +Y     G+++EK YPY+  +    KC Y+       +G + + F 
Sbjct: 184 GNNGCNGGLMDNAFKYIKDNDGIDTEKTYPYEAVDD---KCRYNPKN----SGAEDVGFV 236

Query: 127 ----NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
                    +   L   GP+SV +++        +     DE CS  +L H VL+VGYG 
Sbjct: 237 DIPAGDEHKLMLALATVGPVSVAIDASQESFQLYSDGVYYDENCSSENLDHGVLVVGYGT 296

Query: 183 -QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            +D   YWLV+NSWGP   DEG+ K+ R  +N CGI   A Y  +
Sbjct: 297 DEDGGDYWLVKNSWGPSWGDEGYIKMARNRDNHCGIASSASYPLV 341



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 957  DVVKNDETCSPYDLGHAVLLVGYGKQDDI-PYWLVRNSWGPIGPDEGFFKIERG-NNACG 1014
            D V  DE CS  +L H VL+VGYG  +D   YWLV+NSWGP   DEG+ K+ R  +N CG
Sbjct: 272  DGVYYDENCSSENLDHGVLVVGYGTDEDGGDYWLVKNSWGPSWGDEGYIKMARNRDNHCG 331

Query: 1015 IEQIAGYATI 1024
            I   A Y  +
Sbjct: 332  IASSASYPLV 341


>gi|93279455|pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor
          Length = 215

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  + 
Sbjct: 1   TPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 60

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 128
            GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   +    
Sbjct: 61  DGCGGGYMTNAFQYVQRNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGN 117

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +K+ + + GP+SV +++ L      +     DE CS  +L HAVL VGYG Q    +
Sbjct: 118 EKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNLNHAVLAVGYGIQKGNKH 177

Query: 189 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 178 WIIKNSWGESWGNKGYILMARNKNNACGIANLASFPKM 215



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  + 
Sbjct: 1   TPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 60

Query: 802 SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 859
            GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   +    
Sbjct: 61  DGCGGGYMTNAFQYVQRNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGN 117

Query: 860 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 919
            + +K+ + + GP+SV +++ L      +     DE CS  +L HAVL VGYG Q    +
Sbjct: 118 EKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNLNHAVLAVGYGIQKGNKH 177

Query: 920 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 178 WIIKNSWGESWGNKGYILMARNKNNACGIANLASFPKM 215



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 117/219 (53%), Gaps = 7/219 (3%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  + 
Sbjct: 1   TPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 60

Query: 436 SGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFN 493
            GCGG   +    +Y  +  G++SE  YPY    G+   C Y+ + K     G   +   
Sbjct: 61  DGCGG-GYMTNAFQYVQRNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEG 116

Query: 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIP 553
             + +K+ + + GP+SV +++ L  F   +     DE CS  +L HAVL VGYG Q    
Sbjct: 117 NEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNLNHAVLAVGYGIQKGNK 176

Query: 554 YWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           +W+ +NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 177 HWIIKNSWGESWGNKGYILMARNKNNACGIANLASFPKM 215



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE CS  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 152  DENCSSDNLNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKGYILMARNKNNACGIANLAS 211

Query: 1021 YATI 1024
            +  +
Sbjct: 212  FPKM 215


>gi|307141900|gb|ADN34745.1| putative cysteine peptidase [Echinococcus granulosus]
          Length = 218

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/220 (40%), Positives = 117/220 (53%), Gaps = 18/220 (8%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD+ DWRKK +  P  DQ DCGSCWAFS  G LEGQ   K GKL+  S+ QLV+C+   
Sbjct: 7   VPDSIDWRKKGLVTPIKDQGDCGSCWAFSATGALEGQLKRKKGKLISLSEQQLVDCSTDM 66

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-- 126
              GC+G +   +  Y  Q G ESE DYPY   +G   KC ++ SKV     K F+    
Sbjct: 67  GNEGCNGGYMNDAFRYWMQNGAESESDYPYTAMDG---KCKFNSSKVVTKVSK-FVKVPK 122

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETCSPYDLGHAVLLVGY-G 181
              + +K  + + GP+SV +++      +G  + K     D TCS   L HAVL+VGY  
Sbjct: 123 KREDQLKLSVAQVGPVSVAIDA----ASSGFMLYKKGIYQDNTCSQQYLDHAVLVVGYDA 178

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
                 YW+V+NSWG      G+  + R   N CGI  +A
Sbjct: 179 DMAGQKYWIVKNSWGEDWGQRGYIWMARDKGNMCGIATMA 218



 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 116/220 (52%), Gaps = 18/220 (8%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD+ DWRKK +  P  DQ  CGSCWAFS  G LEGQ   K GKL+  S+ QLV+C+   
Sbjct: 7   VPDSIDWRKKGLVTPIKDQGDCGSCWAFSATGALEGQLKRKKGKLISLSEQQLVDCSTDM 66

Query: 802 S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-- 857
              GC+G +   +  Y  Q G ESE DYPY   +G   KC ++ SKV     K F+    
Sbjct: 67  GNEGCNGGYMNDAFRYWMQNGAESESDYPYTAMDG---KCKFNSSKVVTKVSK-FVKVPK 122

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETCSPYDLGHAVLLVGY-G 912
              + +K  + + GP+SV +++      +G  + K     D TCS   L HAVL+VGY  
Sbjct: 123 KREDQLKLSVAQVGPVSVAIDA----ASSGFMLYKKGIYQDNTCSQQYLDHAVLVVGYDA 178

Query: 913 KQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
                 YW+V+NSWG      G+  + R   N CGI  +A
Sbjct: 179 DMAGQKYWIVKNSWGEDWGQRGYIWMARDKGNMCGIATMA 218



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 110/216 (50%), Gaps = 9/216 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD+ DWRKK +  P  DQ  CGSCWAFS  G LEGQ   K GKL+  S+ QLV+C+   
Sbjct: 7   VPDSIDWRKKGLVTPIKDQGDCGSCWAFSATGALEGQLKRKKGKLISLSEQQLVDCSTDM 66

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN 493
            G  GC+G  +     Y  Q G ESE DYPY   +G   KC ++ SKV     K      
Sbjct: 67  -GNEGCNGGYMNDAFRYWMQNGAESESDYPYTAMDG---KCKFNSSKVVTKVSKFVKVPK 122

Query: 494 GSETMKKI-LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGY-GKQDD 551
             E   K+ + + GP+SV +++    F         D TCS   L HAVL+VGY      
Sbjct: 123 KREDQLKLSVAQVGPVSVAIDAASSGFMLYKKGIYQDNTCSQQYLDHAVLVVGYDADMAG 182

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
             YW+ +NSWG      G+  + R   N CGI  +A
Sbjct: 183 QKYWIVKNSWGEDWGQRGYIWMARDKGNMCGIATMA 218


>gi|21483184|gb|AAF86584.1| cathepsin L cysteine protease [Haemonchus contortus]
          Length = 355

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 124/226 (54%), Gaps = 19/226 (8%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
           +P++ DWR++ +  P  +Q  CGSCWAFS  G LEGQ+A  TGKLV  S+  LV+C+ + 
Sbjct: 138 IPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEGQHARATGKLVSLSEQNLVDCSTKY 197

Query: 801 -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 857
              GC+G   + + EY  +  G+++E  YPY    G + KC + ++ V     K F+   
Sbjct: 198 GNHGCNGGLMDLAFEYIKENHGVDTEDSYPYV---GRETKCHFKRNTVGA-DDKGFVDLP 253

Query: 858 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETCSPYDLGHAVLLVGYG 912
               E +KK +   GP+S+ +++     +    + K     DE CS  +L H VLLVGYG
Sbjct: 254 EGDEEALKKAVATQGPISIAIDA----GHRSFQLYKKGVYFDEECSSEELDHGVLLVGYG 309

Query: 913 KQDNI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
                  YWLV+NSWGP   ++G+ +I R  NN CG+   A Y  +
Sbjct: 310 TDPEAGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGVATKASYPLV 355



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 124/226 (54%), Gaps = 19/226 (8%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P++ DWR++ +  P  +Q  CGSCWAFS  G LEGQ+A  TGKLV  S+  LV+C+ + 
Sbjct: 138 IPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEGQHARATGKLVSLSEQNLVDCSTKY 197

Query: 70  -CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
              GC+G   + + EY  +  G+++E  YPY    G + KC + ++ V     K F+   
Sbjct: 198 GNHGCNGGLMDLAFEYIKENHGVDTEDSYPYV---GRETKCHFKRNTVGA-DDKGFVDLP 253

Query: 127 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETCSPYDLGHAVLLVGYG 181
               E +KK +   GP+S+ +++     +    + K     DE CS  +L H VLLVGYG
Sbjct: 254 EGDEEALKKAVATQGPISIAIDA----GHRSFQLYKKGVYFDEECSSEELDHGVLLVGYG 309

Query: 182 KQDNI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
                  YWLV+NSWGP   ++G+ +I R  NN CG+   A Y  +
Sbjct: 310 TDPEAGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGVATKASYPLV 355



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 123/223 (55%), Gaps = 12/223 (5%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P++ DWR++ +  P  +Q  CGSCWAFS  G LEGQ+A  TGKLV  S+  LV+C+ + 
Sbjct: 138 IPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEGQHARATGKLVSLSEQNLVDCSTKY 197

Query: 436 SGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            G  GC+G  ++   EY  +  G+++E  YPY    G + KC + ++ V     K F+  
Sbjct: 198 -GNHGCNGGLMDLAFEYIKENHGVDTEDSYPYV---GRETKCHFKRNTVGA-DDKGFVDL 252

Query: 493 --NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                E +KK +   GP+S+ +++    F         DE CS  +L H VLLVGYG   
Sbjct: 253 PEGDEEALKKAVATQGPISIAIDAGHRSFQLYKKGVYFDEECSSEELDHGVLLVGYGTDP 312

Query: 551 DI-PYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           +   YWL +NSWGP   ++G+ +I R  NN CG+   A Y  +
Sbjct: 313 EAGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGVATKASYPLV 355



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 6/103 (5%)

Query: 928  PIGPDEGFFKIERGNNACGIEQIAGYATIDVVKN----DETCSPYDLGHAVLLVGYGKQD 983
            P G +E   K         I   AG+ +  + K     DE CS  +L H VLLVGYG   
Sbjct: 253  PEGDEEALKKAVATQGPISIAIDAGHRSFQLYKKGVYFDEECSSEELDHGVLLVGYGTDP 312

Query: 984  DI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            +   YWLV+NSWGP   ++G+ +I R  NN CG+   A Y  +
Sbjct: 313  EAGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGVATKASYPLV 355


>gi|157862755|gb|ABV90500.1| cathepsin L, partial [Fasciola gigantica]
          Length = 251

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 117/227 (51%), Gaps = 11/227 (4%)

Query: 738 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 797
           K+  VP + DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C
Sbjct: 29  KNRAVPTSIDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKSQRINISFSEQQLVDC 88

Query: 798 AKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDF 854
           +      GC G   E + EY    GLE+E  YPY+   G    C YDK   V   +    
Sbjct: 89  SGDFGNHGCSGGLMEKAYEYLRHFGLETESSYPYRADEG---PCQYDKQLGVAQLSDYYI 145

Query: 855 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
           +H      +K ++   GP +V L+ ++      + I + DE CS   L HA+L VGYG +
Sbjct: 146 VHSQDEVALKNLIGVEGPAAVALDVNIDFMMYKSGIYQ-DEICSSRYLNHALLAVGYGTE 204

Query: 915 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVVK 960
           D   YW+V+NSWG    + G+ ++ R  +N CG   IA  A++ +VK
Sbjct: 205 DGTEYWIVKNSWGSRWGEHGYIRLARNRDNMCG---IATLASLPIVK 248



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/218 (36%), Positives = 112/218 (51%), Gaps = 8/218 (3%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           K+  VP + DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C
Sbjct: 29  KNRAVPTSIDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKSQRINISFSEQQLVDC 88

Query: 67  AKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDF 123
           +      GC G   E + EY    GLE+E  YPY+   G    C YDK   V   +    
Sbjct: 89  SGDFGNHGCSGGLMEKAYEYLRHFGLETESSYPYRADEG---PCQYDKQLGVAQLSDYYI 145

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +H      +K ++   GP +V L+ ++      + I + DE CS   L HA+L VGYG +
Sbjct: 146 VHSQDEVALKNLIGVEGPAAVALDVNIDFMMYKSGIYQ-DEICSSRYLNHALLAVGYGTE 204

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 220
           D   YW+V+NSWG    + G+ ++ R  +N CGI  +A
Sbjct: 205 DGTEYWIVKNSWGSRWGEHGYIRLARNRDNMCGIATLA 242



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/219 (36%), Positives = 113/219 (51%), Gaps = 9/219 (4%)

Query: 372 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 431
           K+  VP + DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C
Sbjct: 29  KNRAVPTSIDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKSQRINISFSEQQLVDC 88

Query: 432 AKQCSGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKD 488
           +    G  GC G  +E+  EY    GLE+E  YPYR   G    C YDK   V   +   
Sbjct: 89  SGDF-GNHGCSGGLMEKAYEYLRHFGLETESSYPYRADEG---PCQYDKQLGVAQLSDYY 144

Query: 489 FLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
            ++      +K ++   GP +V L+ ++      + I + DE CS   L HA+L VGYG 
Sbjct: 145 IVHSQDEVALKNLIGVEGPAAVALDVNIDFMMYKSGIYQ-DEICSSRYLNHALLAVGYGT 203

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIA 586
           +D   YW+ +NSWG    + G+ ++ R  +N CGI  +A
Sbjct: 204 EDGTEYWIVKNSWGSRWGEHGYIRLARNRDNMCGIATLA 242


>gi|349604730|gb|AEQ00199.1| Cathepsin K-like protein, partial [Equus caballus]
          Length = 219

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 2   EGRAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 61

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 62  SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIP 118

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL VGYG Q  
Sbjct: 119 QGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVYYDENCNSDNLNHAVLAVGYGIQKG 178

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 179 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANMASFPKM 219



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 2   EGRAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 61

Query: 799 KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 856
            +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 62  SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIP 118

Query: 857 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL VGYG Q  
Sbjct: 119 QGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVYYDENCNSDNLNHAVLAVGYGIQKG 178

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 179 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANMASFPKM 219



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 119/222 (53%), Gaps = 7/222 (3%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 2   EGRAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 61

Query: 433 KQCSGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFL 490
            +  GCGG   +    +Y  +  G++SE  YPY    G+   C Y+ + K     G   +
Sbjct: 62  SENDGCGG-GYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREI 117

Query: 491 YFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                + +K+ + + GP+SV +++ L  F   +     DE C+  +L HAVL VGYG Q 
Sbjct: 118 PQGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVYYDENCNSDNLNHAVLAVGYGIQK 177

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
              +W+ +NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 178 GNKHWIIKNSWGENWGNKGYILMARNKNNACGIANMASFPKM 219



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 156  DENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANMAS 215

Query: 1021 YATI 1024
            +  +
Sbjct: 216  FPKM 219


>gi|301612003|ref|XP_002935514.1| PREDICTED: cathepsin K-like [Xenopus (Silurana) tropicalis]
          Length = 331

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/273 (36%), Positives = 141/273 (51%), Gaps = 26/273 (9%)

Query: 328 GTSEFSDRSPEEIL-CKTGFK-WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 385
           G ++F D + EE++   TG K  +      + +D         E E    +P++ D+RKK
Sbjct: 76  GMNKFGDMTSEEVVRMMTGLKVHTGMGPTNLTSD---------EDEASQRIPNSIDYRKK 126

Query: 386 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE 445
               P  DQ  CGSCWAFS  G LEGQ   KTGKLV  S   LV+C K   GCGG   + 
Sbjct: 127 GYVTPIRDQGECGSCWAFSTVGALEGQLMKKTGKLVGISPQNLVDCVKDNFGCGG-GYMT 185

Query: 446 QPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS----KVKLFTGKDFLYFNGSET-MK 499
              +Y  +  G++SE+ YPY    G   KC Y+ S    ++K F         GSET +K
Sbjct: 186 TAFKYVKKNKGIDSEEAYPYV---GMDQKCKYNVSGRAAEIKGFKEVK----KGSETALK 238

Query: 500 KILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARN 559
           K +   GP+SVG+++ L  F+        D++C    + HAVL VGYGKQ    YW+ +N
Sbjct: 239 KAVGLVGPISVGIDAGLDTFFLYKKGIYYDKSCDGDSINHAVLAVGYGKQKKGKYWIIKN 298

Query: 560 SWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           SWG    ++G+  + R   NACGI  +A Y  +
Sbjct: 299 SWGEDWGNKGYILMAREKGNACGIANLASYPVM 331



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 123/226 (54%), Gaps = 8/226 (3%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           E E    +P++ D+RKK    P  DQ +CGSCWAFS  G LEGQ   KTGKLV  S   L
Sbjct: 110 EDEASQRIPNSIDYRKKGYVTPIRDQGECGSCWAFSTVGALEGQLMKKTGKLVGISPQNL 169

Query: 64  VECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 122
           V+C K   GC G +   + +Y  +  G++SE+ YPY    G   KC Y+ S  +    K 
Sbjct: 170 VDCVKDNFGCGGGYMTTAFKYVKKNKGIDSEEAYPYV---GMDQKCKYNVSG-RAAEIKG 225

Query: 123 FLHF-NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
           F     GSET +KK +   GP+SV +++ L   +        D++C    + HAVL VGY
Sbjct: 226 FKEVKKGSETALKKAVGLVGPISVGIDAGLDTFFLYKKGIYYDKSCDGDSINHAVLAVGY 285

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           GKQ    YW+++NSWG    ++G+  + R   NACGI  +A Y  +
Sbjct: 286 GKQKKGKYWIIKNSWGEDWGNKGYILMAREKGNACGIANLASYPVM 331



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 139/269 (51%), Gaps = 19/269 (7%)

Query: 694 GTSEFSDRSPEEIL-CKTGFK-WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 751
           G ++F D + EE++   TG K  +      + +D         E E    +P++ D+RKK
Sbjct: 76  GMNKFGDMTSEEVVRMMTGLKVHTGMGPTNLTSD---------EDEASQRIPNSIDYRKK 126

Query: 752 NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 811
               P  DQ  CGSCWAFS  G LEGQ   KTGKLV  S   LV+C K   GC G +   
Sbjct: 127 GYVTPIRDQGECGSCWAFSTVGALEGQLMKKTGKLVGISPQNLVDCVKDNFGCGGGYMTT 186

Query: 812 SIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILY 868
           + +Y  +  G++SE+ YPY    G   KC Y+ S  +    K F     GSET +KK + 
Sbjct: 187 AFKYVKKNKGIDSEEAYPYV---GMDQKCKYNVSG-RAAEIKGFKEVKKGSETALKKAVG 242

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
             GP+SV +++ L   +        D++C    + HAVL VGYGKQ    YW+++NSWG 
Sbjct: 243 LVGPISVGIDAGLDTFFLYKKGIYYDKSCDGDSINHAVLAVGYGKQKKGKYWIIKNSWGE 302

Query: 929 IGPDEGFFKIER-GNNACGIEQIAGYATI 956
              ++G+  + R   NACGI  +A Y  +
Sbjct: 303 DWGNKGYILMAREKGNACGIANLASYPVM 331



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAG 1020
            D++C    + HAVL VGYGKQ    YW+++NSWG    ++G+  + R   NACGI  +A 
Sbjct: 268  DKSCDGDSINHAVLAVGYGKQKKGKYWIIKNSWGEDWGNKGYILMAREKGNACGIANLAS 327

Query: 1021 YATI 1024
            Y  +
Sbjct: 328  YPVM 331


>gi|91092014|ref|XP_970644.1| PREDICTED: similar to cathepsin-L-like cysteine peptidase 02
           [Tribolium castaneum]
 gi|270001249|gb|EEZ97696.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 156/323 (48%), Gaps = 28/323 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 701
           + E + AF V   +QY ++ E + R + F ++ HK  KH +           G +++SD 
Sbjct: 23  VQEQWGAFKVTHKKQYESETEERFRMKIFMENAHKVAKHNKLYAQGLVSFKLGVNKYSDM 82

Query: 702 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
              E +    G+  S+        D    E +      +  +P   DWRK     P  DQ
Sbjct: 83  LNHEFVHTLNGYNRSKTPLRSGELD----ESITFIPPANVELPKQIDWRKLGAVTPVKDQ 138

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH- 817
             CGSCW+FS  G LEGQ+  K+ KLV  S+  L++C+++   +GC+G   + +  Y   
Sbjct: 139 GQCGSCWSFSTTGSLEGQHFRKSKKLVSLSEQNLIDCSEKYGNNGCNGGLMDNAFRYIKD 198

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETMKKILYKYGPLSV 875
             G+++E+ YPYK    E  KC Y K + K  T + F+       E +K  +   GP+SV
Sbjct: 199 NGGIDTEQSYPYK---AEDEKCHY-KPRNKGATDRGFVDIESGDEEKLKAAVATVGPISV 254

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK-QDNIPYWLVRNSWGPIGPDEG 934
            +++        +     +  CS   L H VL+VGYG  +D   YWLV+NSWG    D+G
Sbjct: 255 AIDASHPTFQQYSEGVYYEPECSSEQLDHGVLVVGYGTDEDGNDYWLVKNSWGDSWGDQG 314

Query: 935 FFKIERG-NNACGIEQIAGYATI 956
           + K+ R  +N CGI   A Y  +
Sbjct: 315 YIKMARNRDNNCGIATQASYPLV 337



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 156/324 (48%), Gaps = 29/324 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 335
           + E + AF V   +QY ++ E + R + F ++ HK  KH +           G +++SD 
Sbjct: 23  VQEQWGAFKVTHKKQYESETEERFRMKIFMENAHKVAKHNKLYAQGLVSFKLGVNKYSDM 82

Query: 336 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
              E +    G+  S+        D    E +      +  +P   DWRK     P  DQ
Sbjct: 83  LNHEFVHTLNGYNRSKTPLRSGELD----ESITFIPPANVELPKQIDWRKLGAVTPVKDQ 138

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH 452
             CGSCW+FS  G LEGQ+  K+ KLV  S+  L++C+++  G  GC+G  ++    Y  
Sbjct: 139 GQCGSCWSFSTTGSLEGQHFRKSKKLVSLSEQNLIDCSEK-YGNNGCNGGLMDNAFRYIK 197

Query: 453 -QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG--SETMKKILYKYGPLS 509
              G+++E+ YPY+    E  KC Y K + K  T + F+       E +K  +   GP+S
Sbjct: 198 DNGGIDTEQSYPYK---AEDEKCHY-KPRNKGATDRGFVDIESGDEEKLKAAVATVGPIS 253

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDE 568
           V +++    F   +     +  CS   L H VL+VGYG  +D   YWL +NSWG    D+
Sbjct: 254 VAIDASHPTFQQYSEGVYYEPECSSEQLDHGVLVVGYGTDEDGNDYWLVKNSWGDSWGDQ 313

Query: 569 GFFKIERG-NNACGIEQIAGYATI 591
           G+ K+ R  +N CGI   A Y  +
Sbjct: 314 GYIKMARNRDNNCGIATQASYPLV 337



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P   DWRK     P  DQ  CGSCW+FS  G LEGQ+  K+ KLV  S+  L++C+++ 
Sbjct: 120 LPKQIDWRKLGAVTPVKDQGQCGSCWSFSTTGSLEGQHFRKSKKLVSLSEQNLIDCSEKY 179

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GC+G   + +  Y     G+++E+ YPYK    E  KC Y K + K  T + F+   
Sbjct: 180 GNNGCNGGLMDNAFRYIKDNGGIDTEQSYPYK---AEDEKCHY-KPRNKGATDRGFVDIE 235

Query: 128 G--SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK-QD 184
               E +K  +   GP+SV +++        +     +  CS   L H VL+VGYG  +D
Sbjct: 236 SGDEEKLKAAVATVGPISVAIDASHPTFQQYSEGVYYEPECSSEQLDHGVLVVGYGTDED 295

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
              YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 296 GNDYWLVKNSWGDSWGDQGYIKMARNRDNNCGIATQASYPLV 337



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  IE G+       +A    I V               V  +  CS   L H VL+
Sbjct: 228  DRGFVDIESGDEEKLKAAVATVGPISVAIDASHPTFQQYSEGVYYEPECSSEQLDHGVLV 287

Query: 977  VGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG  +D   YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 288  VGYGTDEDGNDYWLVKNSWGDSWGDQGYIKMARNRDNNCGIATQASYPLV 337


>gi|351694420|gb|EHA97338.1| Cathepsin K [Heterocephalus glaber]
          Length = 329

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  Q  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFQYVQQNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREVP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C   +L HAVL VGYG Q  
Sbjct: 229 VGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCDGDNLNHAVLAVGYGIQRG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NN CGI  +A +  +
Sbjct: 289 HKHWILKNSWGENWGNKGYVLLARNKNNTCGIANLASFPKM 329



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 6/221 (2%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 799 KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 856
            +  GC G +   + +Y  Q  G++SE  YPY    G+   C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFQYVQQNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREVP 228

Query: 857 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               + +K+ + + GP+SV +++ L      +     DE+C   +L HAVL VGYG Q  
Sbjct: 229 VGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCDGDNLNHAVLAVGYGIQRG 288

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
             +W+++NSWG    ++G+  + R  NN CGI  +A +  +
Sbjct: 289 HKHWILKNSWGENWGNKGYVLLARNKNNTCGIANLASFPKM 329



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 118/222 (53%), Gaps = 7/222 (3%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 433 KQCSGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFL 490
            +  GCGG   +    +Y  Q  G++SE  YPY    G+   C Y+ + K     G   +
Sbjct: 172 SENDGCGG-GYMTNAFQYVQQNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREV 227

Query: 491 YFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                + +K+ + + GP+SV +++ L  F   +     DE+C   +L HAVL VGYG Q 
Sbjct: 228 PVGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCDGDNLNHAVLAVGYGIQR 287

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
              +W+ +NSWG    ++G+  + R  NN CGI  +A +  +
Sbjct: 288 GHKHWILKNSWGENWGNKGYVLLARNKNNTCGIANLASFPKM 329



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C   +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NN CGI  +A 
Sbjct: 266  DESCDGDNLNHAVLAVGYGIQRGHKHWILKNSWGENWGNKGYVLLARNKNNTCGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|348531523|ref|XP_003453258.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 341

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 124/233 (53%), Gaps = 16/233 (6%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
              + K   +PD  DWR K       +Q DCGSCWAFS  G LEGQ+  KTGKLV  SK 
Sbjct: 116 FFRLPKGTVLPDTVDWRDKGYVTNVQNQMDCGSCWAFSATGSLEGQHFRKTGKLVSLSKQ 175

Query: 62  QLVECAKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYD-KSKVKL 117
           QLV+C+ +    GC+G   + + +Y     G+++E+ YPY+  +G   KC Y+ KS    
Sbjct: 176 QLVDCSGEFGNEGCNGGLMDSAFQYIQANGGIDTEESYPYEAEDG---KCRYNPKSTGAT 232

Query: 118 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD----YNGTPIRKNDETCSPYDLGH 173
            TG   +     ET+K+ +   GP+SV +  D  H     Y      + D  CS   L H
Sbjct: 233 CTGYVDVQPANEETLKEAVATIGPISVAI--DAFHPSFQFYESGVYDEPD--CSSTMLDH 288

Query: 174 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           AVL VGYG ++ + YWLV+NS G    ++G+ K+ R  +N CGI   A Y  +
Sbjct: 289 AVLAVGYGTENGLDYWLVKNSAGVGWGEKGYIKMSRNKSNQCGIATAASYPLV 341



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 140/286 (48%), Gaps = 38/286 (13%)

Query: 689 KHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVA---------DREKVEKMLMEVEKD 739
           K  R G ++F+D   EE             Y+R+V+            +       + K 
Sbjct: 76  KSYRLGMTQFADMENEE-------------YKRLVSQGCLHSFNSSLPRRGSTFFRLPKG 122

Query: 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
             +PD  DWR K       +Q  CGSCWAFS  G LEGQ+  KTGKLV  SK QLV+C+ 
Sbjct: 123 TVLPDTVDWRDKGYVTNVQNQMDCGSCWAFSATGSLEGQHFRKTGKLVSLSKQQLVDCSG 182

Query: 800 QC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFL 855
           +    GC+G   + + +Y     G+++E+ YPY+  +G   KC Y+ KS     TG   +
Sbjct: 183 EFGNEGCNGGLMDSAFQYIQANGGIDTEESYPYEAEDG---KCRYNPKSTGATCTGYVDV 239

Query: 856 HFNGSETMKKILYKYGPLSVLLNSDLIHD----YNGTPIRKNDETCSPYDLGHAVLLVGY 911
                ET+K+ +   GP+SV +  D  H     Y      + D  CS   L HAVL VGY
Sbjct: 240 QPANEETLKEAVATIGPISVAI--DAFHPSFQFYESGVYDEPD--CSSTMLDHAVLAVGY 295

Query: 912 GKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           G ++ + YWLV+NS G    ++G+ K+ R  +N CGI   A Y  +
Sbjct: 296 GTENGLDYWLVKNSAGVGWGEKGYIKMSRNKSNQCGIATAASYPLV 341



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 139/283 (49%), Gaps = 31/283 (10%)

Query: 323 KHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVA---------DREKVEKMLMEVEKD 373
           K  R G ++F+D   EE             Y+R+V+            +       + K 
Sbjct: 76  KSYRLGMTQFADMENEE-------------YKRLVSQGCLHSFNSSLPRRGSTFFRLPKG 122

Query: 374 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
             +PD  DWR K       +Q  CGSCWAFS  G LEGQ+  KTGKLV  SK QLV+C+ 
Sbjct: 123 TVLPDTVDWRDKGYVTNVQNQMDCGSCWAFSATGSLEGQHFRKTGKLVSLSKQQLVDCSG 182

Query: 434 QCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDF 489
           +  G  GC+G  ++   +Y     G+++E+ YPY   +G   KC Y+ KS     TG   
Sbjct: 183 EF-GNEGCNGGLMDSAFQYIQANGGIDTEESYPYEAEDG---KCRYNPKSTGATCTGYVD 238

Query: 490 LYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           +     ET+K+ +   GP+SV +++    F        ++  CS   L HAVL VGYG +
Sbjct: 239 VQPANEETLKEAVATIGPISVAIDAFHPSFQFYESGVYDEPDCSSTMLDHAVLAVGYGTE 298

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           + + YWL +NS G    ++G+ K+ R  +N CGI   A Y  +
Sbjct: 299 NGLDYWLVKNSAGVGWGEKGYIKMSRNKSNQCGIATAASYPLV 341



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V ++  CS   L HAVL VGYG ++ + YWLV+NS G    ++G+ K+ R  +N CGI  
Sbjct: 275  VYDEPDCSSTMLDHAVLAVGYGTENGLDYWLVKNSAGVGWGEKGYIKMSRNKSNQCGIAT 334

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 335  AASYPLV 341


>gi|300121328|emb|CBK21708.2| unnamed protein product [Blastocystis hominis]
          Length = 318

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 33/297 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 709
           F +++ K G+ YA  EE + R   F  +  K  E          G ++F+D S EE    
Sbjct: 22  FTSYMSKYGKTYAAPEEARYRLRVFNDNLLKIKEHNAKNLPWTLGVNKFADVSAEEF--- 78

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
                    Y+     ++   +   +    G VP   DWR++    P  +Q  CGSCWAF
Sbjct: 79  --------AYKFCGCAKDPKTRGTRQTTLVGDVPARVDWREQGAVTPVKNQGMCGSCWAF 130

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAK----QCSGCDGCFFEPSIEYTHQAGLESEK 825
           S  G  EG Y +KTG LV  S+ QLV+CA+    +  GC G +   +++Y  + GL +E+
Sbjct: 131 STTGTTEGAYFLKTGNLVSLSEQQLVDCARDPEYENFGCSGGWPWSAVDYVTKHGLCTEE 190

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 885
           DYPYK  + E   C     KV + +        G E    +     P+S++L++  +  Y
Sbjct: 191 DYPYKGVDAE---CKESSCKVAVQSVDKVQLPVGDEDSLAVAVSKTPVSIVLDATAMQLY 247

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGK--QDNIPYWLVRNSWGPIGPDEGFFKIER 940
           +   I +  E+     + HAVL VGY K  +  + YW+++NSWG    +EG+ +IE+
Sbjct: 248 DKGIITRCSES-----INHAVLAVGYDKDAETGLKYWIIKNSWGADWGEEGYCRIEK 299



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 139/298 (46%), Gaps = 34/298 (11%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 343
           F +++ K G+ YA  EE + R   F  +  K  E          G ++F+D S EE    
Sbjct: 22  FTSYMSKYGKTYAAPEEARYRLRVFNDNLLKIKEHNAKNLPWTLGVNKFADVSAEEF--- 78

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
                    Y+     ++   +   +    G VP   DWR++    P  +Q  CGSCWAF
Sbjct: 79  --------AYKFCGCAKDPKTRGTRQTTLVGDVPARVDWREQGAVTPVKNQGMCGSCWAF 130

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAK----QCSGCGGCDGLEQPIEYTHQAGLESE 459
           S  G  EG Y +KTG LV  S+ QLV+CA+    +  GC G       ++Y  + GL +E
Sbjct: 131 STTGTTEGAYFLKTGNLVSLSEQQLVDCARDPEYENFGCSG-GWPWSAVDYVTKHGLCTE 189

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
           +DYPY+  + E   C     KV + +        G E    +     P+S+ L++  +  
Sbjct: 190 EDYPYKGVDAE---CKESSCKVAVQSVDKVQLPVGDEDSLAVAVSKTPVSIVLDATAMQL 246

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGK--QDDIPYWLARNSWGPIGPDEGFFKIER 575
           Y+   I +  E+     + HAVL VGY K  +  + YW+ +NSWG    +EG+ +IE+
Sbjct: 247 YDKGIITRCSES-----INHAVLAVGYDKDAETGLKYWIIKNSWGADWGEEGYCRIEK 299



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 14/207 (6%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G VP   DWR++    P  +Q  CGSCWAFS  G  EG Y +KTG LV  S+ QLV+CA+
Sbjct: 101 GDVPARVDWREQGAVTPVKNQGMCGSCWAFSTTGTTEGAYFLKTGNLVSLSEQQLVDCAR 160

Query: 69  ----QCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
               +  GC G +   +++Y  + GL +E+DYPYK  + E   C     KV + +     
Sbjct: 161 DPEYENFGCSGGWPWSAVDYVTKHGLCTEEDYPYKGVDAE---CKESSCKVAVQSVDKVQ 217

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK-- 182
              G E    +     P+S++L++  +  Y+   I +  E+     + HAVL VGY K  
Sbjct: 218 LPVGDEDSLAVAVSKTPVSIVLDATAMQLYDKGIITRCSES-----INHAVLAVGYDKDA 272

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIER 209
           +  + YW+++NSWG    +EG+ +IE+
Sbjct: 273 ETGLKYWIIKNSWGADWGEEGYCRIEK 299



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 2/41 (4%)

Query: 970  LGHAVLLVGYGK--QDDIPYWLVRNSWGPIGPDEGFFKIER 1008
            + HAVL VGY K  +  + YW+++NSWG    +EG+ +IE+
Sbjct: 259  INHAVLAVGYDKDAETGLKYWIIKNSWGADWGEEGYCRIEK 299


>gi|394331814|gb|AFN27126.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 138/303 (45%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VP A DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPYAVDWRKKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGC G     + E+        + +
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDSGCGGGLMLQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY +++G   +C+     V       ++    SET M   L K GP+S+ +++   
Sbjct: 211 EDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY     +PYW+++NSWG    + G+ ++  G 
Sbjct: 271 MSYESGVL----TSCAGDTLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGENGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 139/304 (45%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VP A DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPYAVDWRKKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+   +L   S+ QLV C  + SGCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDSGCGGGLML-QAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY + +G   +C+     V       ++    SET M   L K GP+S+ +++  
Sbjct: 210 TEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY    ++PYW+ +NSWG    + G+ ++  G
Sbjct: 270 FMSYESGVL----TSCAGDTLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGENGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VP A DWRKK    P  DQ  CGSCWAFS  G +E Q+A+   +L   S+ QLV C  + 
Sbjct: 126 VPYAVDWRKKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           SGC G     + E+        + +E  YPY +++G   +C+     V       ++   
Sbjct: 186 SGCGGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +
Sbjct: 246 SSETVMAAWLAKNGPISIAVDASSFMSYESGVL----TSCAGDTLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    + G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGENGYVRVTMGVNAC 329



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY    ++PYW+++NSWG    + G+ ++  G NAC
Sbjct: 280  SCAGDTLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGENGYVRVTMGVNAC 329


>gi|168017893|ref|XP_001761481.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687165|gb|EDQ73549.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 471

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 168/334 (50%), Gaps = 35/334 (10%)

Query: 635 VARVDTLA-IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHK 688
           V R D +   E      ++ +L+ F  ++ +  R Y +  E + RF+ FK +      H 
Sbjct: 28  VGRADAIMDYEAHELHSDDGMLDVFHQWLERHSRVYHSLSEKQRRFQIFKDNLHYIHNHN 87

Query: 689 KHER---YGTSEFSDRSPEEILC-KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPD 744
           K E+    G ++FSD + +E      G + + R +     DR   E ++ E        +
Sbjct: 88  KQEKSYWLGLNKFSDLTHDEFRALYLGIRPAGRAHGLRNGDRFIYEDVVAE--------E 139

Query: 745 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK-QCSG 803
             DWRKK       DQ +CGSCWAFS  G +EG  AI TG+L+  S+ +LV+C + Q  G
Sbjct: 140 MVDWRKKGAVSDVKDQGSCGSCWAFSAIGSVEGVNAIVTGELISLSEQELVDCDRGQNQG 199

Query: 804 CDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 862
           C+G   + + ++     G+++E+DYPYK  +G+  +   + SKV +      +      +
Sbjct: 200 CNGGLMDYAFDFIIKNGGIDTEEDYPYKATDGQCDEARKETSKVVVIDDYQDVPTKSESS 259

Query: 863 MKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IP 918
           + K + K  P+SV + +   D  H Y G        T    DL H VL VGYG  D+ + 
Sbjct: 260 LLKAVSK-NPVSVAIEAGGRDFQH-YQGGVFTGPCGT----DLDHGVLAVGYGTDDDGVN 313

Query: 919 YWLVRNSWGPIGPDEGFFKIER-GNNA----CGI 947
           YW+V+NSWGP   ++G+ ++ER G+N+    CGI
Sbjct: 314 YWIVKNSWGPSWGEKGYIRMERMGSNSTSGKCGI 347



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 166/338 (49%), Gaps = 42/338 (12%)

Query: 269 VARVDTLA-IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHK 322
           V R D +   E      ++ +L+ F  ++ +  R Y +  E + RF+ FK +      H 
Sbjct: 28  VGRADAIMDYEAHELHSDDGMLDVFHQWLERHSRVYHSLSEKQRRFQIFKDNLHYIHNHN 87

Query: 323 KHER---YGTSEFSDRSPEEILC-KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPD 378
           K E+    G ++FSD + +E      G + + R +     DR   E ++ E        +
Sbjct: 88  KQEKSYWLGLNKFSDLTHDEFRALYLGIRPAGRAHGLRNGDRFIYEDVVAE--------E 139

Query: 379 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK-QCSG 437
             DWRKK       DQ +CGSCWAFS  G +EG  AI TG+L+  S+ +LV+C + Q  G
Sbjct: 140 MVDWRKKGAVSDVKDQGSCGSCWAFSAIGSVEGVNAIVTGELISLSEQELVDCDRGQNQG 199

Query: 438 CGGCDGLEQPIEYT-----HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
           C G  GL   ++Y         G+++E+DYPY+  +G+  +   + SKV +      +  
Sbjct: 200 CNG--GL---MDYAFDFIIKNGGIDTEEDYPYKATDGQCDEARKETSKVVVIDDYQDVPT 254

Query: 493 NGSETMKKILYKYGPLSVGLNSHLIHF--YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
               ++ K + K  P+SV + +    F  Y G        T    DL H VL VGYG  D
Sbjct: 255 KSESSLLKAVSK-NPVSVAIEAGGRDFQHYQGGVFTGPCGT----DLDHGVLAVGYGTDD 309

Query: 551 D-IPYWLARNSWGPIGPDEGFFKIER-GNNA----CGI 582
           D + YW+ +NSWGP   ++G+ ++ER G+N+    CGI
Sbjct: 310 DGVNYWIVKNSWGPSWGEKGYIRMERMGSNSTSGKCGI 347



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 17/212 (8%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK-QCSGCD 74
           DWRKK       DQ  CGSCWAFS  G +EG  AI TG+L+  S+ +LV+C + Q  GC+
Sbjct: 142 DWRKKGAVSDVKDQGSCGSCWAFSAIGSVEGVNAIVTGELISLSEQELVDCDRGQNQGCN 201

Query: 75  GCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMK 133
           G   + + ++     G+++E+DYPYK  +G+  +   + SKV +      +      ++ 
Sbjct: 202 GGLMDYAFDFIIKNGGIDTEEDYPYKATDGQCDEARKETSKVVVIDDYQDVPTKSESSLL 261

Query: 134 KILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYW 189
           K + K  P+SV + +   D  H Y G        T    DL H VL VGYG  D+ + YW
Sbjct: 262 KAVSK-NPVSVAIEAGGRDFQH-YQGGVFTGPCGT----DLDHGVLAVGYGTDDDGVNYW 315

Query: 190 LVRNSWGPIGPDEGFFKIER-GNNA----CGI 216
           +V+NSWGP   ++G+ ++ER G+N+    CGI
Sbjct: 316 IVKNSWGPSWGEKGYIRMERMGSNSTSGKCGI 347



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 6/53 (11%)

Query: 969  DLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIER-GNNA----CGI 1015
            DL H VL VGYG  DD + YW+V+NSWGP   ++G+ ++ER G+N+    CGI
Sbjct: 295  DLDHGVLAVGYGTDDDGVNYWIVKNSWGPSWGEKGYIRMERMGSNSTSGKCGI 347


>gi|77404197|ref|NP_001029168.1| cathepsin K precursor [Canis lupus familiaris]
 gi|122056102|sp|Q3ZKN1.1|CATK_CANFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|58047562|gb|AAW65150.1| cathepsin K [Canis lupus familiaris]
          Length = 330

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 133/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +     +    L   + +   PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDTLYIPDWESRAPDSVDYRKKGYV 128

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 129 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 188

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + GP
Sbjct: 189 YVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 245

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE C+  +L HAVL VGYG Q    +W+++NSWG    +
Sbjct: 246 ISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGN 305

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 306 KGYILMARNKNNACGIANLASFPKM 330



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  + 
Sbjct: 116 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 175

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 128
            GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   +    
Sbjct: 176 DGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGN 232

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL VGYG Q    +
Sbjct: 233 EKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKH 292

Query: 189 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 293 WIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 330



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +     +    L   + +   PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDTLYIPDWESRAPDSVDYRKKGYV 128

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 129 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 187

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + + G
Sbjct: 188 QYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 244

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE C+  +L HAVL VGYG Q    +W+ +NSWG    
Sbjct: 245 PISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 304

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 305 NKGYILMARNKNNACGIANLASFPKM 330



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 267  DENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 326

Query: 1021 YATI 1024
            +  +
Sbjct: 327  FPKM 330


>gi|301767944|ref|XP_002919404.1| PREDICTED: cathepsin K-like [Ailuropoda melanoleuca]
 gi|281352889|gb|EFB28473.1| hypothetical protein PANDA_008011 [Ailuropoda melanoleuca]
          Length = 330

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 154/329 (46%), Gaps = 28/329 (8%)

Query: 645 GSLTFDNENILET-FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHERYGTS------ 696
            S     E IL+T ++ +    G+QY +  +EI  R  + K   H        S      
Sbjct: 13  ASFALYPEEILDTQWELWKKTYGKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTY 72

Query: 697 -----EFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK 750
                   D + EE++ K TG K        +     +    L   + +   PD+ D+RK
Sbjct: 73  ELAMNHLGDMTSEEVVQKMTGLK--------VPPSHSRNNDTLYIPDWESRAPDSIDYRK 124

Query: 751 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFE 810
           K    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +  
Sbjct: 125 KGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMT 184

Query: 811 PSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILY 868
            + +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ + 
Sbjct: 185 NAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVA 241

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
           + GP+SV +++ L      +     DE C+  +L HAVL VGYG Q    +W+++NSWG 
Sbjct: 242 RVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGE 301

Query: 929 IGPDEGFFKIERG-NNACGIEQIAGYATI 956
              ++G+  + R  NNACGI  +A +  +
Sbjct: 302 NWGNKGYILMARNKNNACGIANLASFPKM 330



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  + 
Sbjct: 116 APDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 175

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 128
            GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G   +    
Sbjct: 176 DGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGN 232

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL VGYG Q    +
Sbjct: 233 EKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKH 292

Query: 189 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 293 WIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 330



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 154/330 (46%), Gaps = 29/330 (8%)

Query: 279 GSLTFDNENILET-FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHERYGTS------ 330
            S     E IL+T ++ +    G+QY +  +EI  R  + K   H        S      
Sbjct: 13  ASFALYPEEILDTQWELWKKTYGKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTY 72

Query: 331 -----EFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK 384
                   D + EE++ K TG K        +     +    L   + +   PD+ D+RK
Sbjct: 73  ELAMNHLGDMTSEEVVQKMTGLK--------VPPSHSRNNDTLYIPDWESRAPDSIDYRK 124

Query: 385 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL 444
           K    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +
Sbjct: 125 KGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYM 183

Query: 445 EQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKIL 502
               +Y  +  G++SE  YPY    G+   C Y+ + K     G   +     + +K+ +
Sbjct: 184 TNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAV 240

Query: 503 YKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWG 562
            + GP+SV +++ L  F   +     DE C+  +L HAVL VGYG Q    +W+ +NSWG
Sbjct: 241 ARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWG 300

Query: 563 PIGPDEGFFKIERG-NNACGIEQIAGYATI 591
               ++G+  + R  NNACGI  +A +  +
Sbjct: 301 ENWGNKGYILMARNKNNACGIANLASFPKM 330



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 267  DENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 326

Query: 1021 YATI 1024
            +  +
Sbjct: 327  FPKM 330


>gi|351724281|ref|NP_001237820.1| cysteine protease-like precursor [Glycine max]
 gi|149393486|gb|ABR26679.1| putative cysteine protease [Glycine max]
          Length = 355

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 144/308 (46%), Gaps = 16/308 (5%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 351
           F  F+ + G+ Y ++EE++ER+E F Q+      R+  S   +R P  +       W+  
Sbjct: 55  FARFMSRFGKSYRSEEEMRERYEIFSQN-----LRFIRSHNKNRLPYTLSVNHFADWTWE 109

Query: 352 TYER-IVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGM 408
            ++R  +   +     L    K  D  +P   DWRK+ +     DQ +CGSCW FS  G 
Sbjct: 110 EFKRHRLGAAQNCSATLNGNHKLTDAVLPPTKDWRKEGIVSDVKDQGSCGSCWTFSTTGA 169

Query: 409 LEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRN 466
           LE   A   GK +  S+ QLV+CA + +  G   GL  Q  EY  +  GLE+E+ YPY  
Sbjct: 170 LEAACAQAFGKSISLSEQQLVDCAGRFNNFGCNGGLPSQAFEYIKYNGGLETEEAYPYTG 229

Query: 467 GNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLN-SHLIHFYNGTP 524
            +G    C +    V +          G+E  +K  +    P+SV     +  HFY    
Sbjct: 230 KDG---VCKFSAENVAVQVIDSVNITLGAENELKHAVAFVRPVSVAFQVVNGFHFYENGV 286

Query: 525 IRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWG-PIGPDEGFFKIERGNNACGIE 583
              +    +  D+ HAVL VGYG ++ +PYWL +   G  +G + G  K+E G N CG+ 
Sbjct: 287 YTSDICGSTSQDVNHAVLAVGYGVENGVPYWLIKKFMGEKVGVENGLLKLELGKNMCGVA 346

Query: 584 QIAGYATI 591
             A Y  +
Sbjct: 347 TCASYPVV 354



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 17/308 (5%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 717
           F  F+ + G+ Y ++EE++ER+E F Q+      R+  S   +R P  +       W+  
Sbjct: 55  FARFMSRFGKSYRSEEEMRERYEIFSQN-----LRFIRSHNKNRLPYTLSVNHFADWTWE 109

Query: 718 TYER-IVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGM 774
            ++R  +   +     L    K  D  +P   DWRK+ +     DQ +CGSCW FS  G 
Sbjct: 110 EFKRHRLGAAQNCSATLNGNHKLTDAVLPPTKDWRKEGIVSDVKDQGSCGSCWTFSTTGA 169

Query: 775 LEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKN 831
           LE   A   GK +  S+ QLV+CA + +  GC+G     + EY  +  GLE+E+ YPY  
Sbjct: 170 LEAACAQAFGKSISLSEQQLVDCAGRFNNFGCNGGLPSQAFEYIKYNGGLETEEAYPYTG 229

Query: 832 ANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLN-SDLIHDYNGTP 889
            +G    C +    V +          G+E  +K  +    P+SV     +  H Y    
Sbjct: 230 KDG---VCKFSAENVAVQVIDSVNITLGAENELKHAVAFVRPVSVAFQVVNGFHFYENGV 286

Query: 890 IRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG-PIGPDEGFFKIERGNNACGIE 948
              +    +  D+ HAVL VGYG ++ +PYWL++   G  +G + G  K+E G N CG+ 
Sbjct: 287 YTSDICGSTSQDVNHAVLAVGYGVENGVPYWLIKKFMGEKVGVENGLLKLELGKNMCGVA 346

Query: 949 QIAGYATI 956
             A Y  +
Sbjct: 347 TCASYPVV 354



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 108/224 (48%), Gaps = 9/224 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRK+ +     DQ  CGSCW FS  G LE   A   GK +  S+ QLV+CA
Sbjct: 134 DAVLPPTKDWRKEGIVSDVKDQGSCGSCWTFSTTGALEAACAQAFGKSISLSEQQLVDCA 193

Query: 68  KQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
            + +  GC+G     + EY  +  GLE+E+ YPY   +G    C +    V +       
Sbjct: 194 GRFNNFGCNGGLPSQAFEYIKYNGGLETEEAYPYTGKDG---VCKFSAENVAVQVIDSVN 250

Query: 125 HFNGSET-MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
              G+E  +K  +    P+SV     +  H Y       +    +  D+ HAVL VGYG 
Sbjct: 251 ITLGAENELKHAVAFVRPVSVAFQVVNGFHFYENGVYTSDICGSTSQDVNHAVLAVGYGV 310

Query: 183 QDNIPYWLVRNSWG-PIGPDEGFFKIERGNNACGIEQIAGYATI 225
           ++ +PYWL++   G  +G + G  K+E G N CG+   A Y  +
Sbjct: 311 ENGVPYWLIKKFMGEKVGVENGLLKLELGKNMCGVATCASYPVV 354


>gi|340381055|ref|XP_003389037.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 117/232 (50%), Gaps = 13/232 (5%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
            V     +PD  DWR K    P  +Q  CGSCWAFS  G LEGQ  +K G L   S+ QL
Sbjct: 101 HVPTGNALPDTVDWRTKGAVTPVKNQKQCGSCWAFSTTGSLEGQTFLKKGTLPSLSEQQL 160

Query: 64  VECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-T 119
           V+C+ +    GC G   + + +Y     G++SE  YPY+  NG   KC + +S V    T
Sbjct: 161 VDCSDKYGNHGCQGGLMDNAFKYIEANGGIDSEASYPYEAKNG---KCRFQQSAVAATCT 217

Query: 120 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
           G   +  +  + ++  +   GP+SV +++             +   CS   L H VL VG
Sbjct: 218 GYKDIPHDDIDGLQDAVANVGPISVAMDASHSSFQLYAAGVYDPLLCSSTRLDHGVLAVG 277

Query: 180 YGKQ------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           YG +      +  PYWLV+NSWGP    +G+FKI R +N CGI   A Y T+
Sbjct: 278 YGTEPSGLFHEEKPYWLVKNSWGPDWGQQGYFKIVRKDNKCGIATDASYPTV 329



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 117/232 (50%), Gaps = 13/232 (5%)

Query: 735 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 794
            V     +PD  DWR K    P  +Q  CGSCWAFS  G LEGQ  +K G L   S+ QL
Sbjct: 101 HVPTGNALPDTVDWRTKGAVTPVKNQKQCGSCWAFSTTGSLEGQTFLKKGTLPSLSEQQL 160

Query: 795 VECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-T 850
           V+C+ +    GC G   + + +Y     G++SE  YPY+  NG   KC + +S V    T
Sbjct: 161 VDCSDKYGNHGCQGGLMDNAFKYIEANGGIDSEASYPYEAKNG---KCRFQQSAVAATCT 217

Query: 851 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 910
           G   +  +  + ++  +   GP+SV +++             +   CS   L H VL VG
Sbjct: 218 GYKDIPHDDIDGLQDAVANVGPISVAMDASHSSFQLYAAGVYDPLLCSSTRLDHGVLAVG 277

Query: 911 YGKQ------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           YG +      +  PYWLV+NSWGP    +G+FKI R +N CGI   A Y T+
Sbjct: 278 YGTEPSGLFHEEKPYWLVKNSWGPDWGQQGYFKIVRKDNKCGIATDASYPTV 329



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 85/233 (36%), Positives = 118/233 (50%), Gaps = 14/233 (6%)

Query: 369 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 428
            V     +PD  DWR K    P  +Q  CGSCWAFS  G LEGQ  +K G L   S+ QL
Sbjct: 101 HVPTGNALPDTVDWRTKGAVTPVKNQKQCGSCWAFSTTGSLEGQTFLKKGTLPSLSEQQL 160

Query: 429 VECAKQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF- 484
           V+C+ +  G  GC G  ++   +Y     G++SE  YPY   NG   KC + +S V    
Sbjct: 161 VDCSDK-YGNHGCQGGLMDNAFKYIEANGGIDSEASYPYEAKNG---KCRFQQSAVAATC 216

Query: 485 TGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLV 544
           TG   +  +  + ++  +   GP+SV +++    F        +   CS   L H VL V
Sbjct: 217 TGYKDIPHDDIDGLQDAVANVGPISVAMDASHSSFQLYAAGVYDPLLCSSTRLDHGVLAV 276

Query: 545 GYGKQ------DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           GYG +      ++ PYWL +NSWGP    +G+FKI R +N CGI   A Y T+
Sbjct: 277 GYGTEPSGLFHEEKPYWLVKNSWGPDWGQQGYFKIVRKDNKCGIATDASYPTV 329



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 6/66 (9%)

Query: 965  CSPYDLGHAVLLVGYGKQ------DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            CS   L H VL VGYG +      ++ PYWLV+NSWGP    +G+FKI R +N CGI   
Sbjct: 264  CSSTRLDHGVLAVGYGTEPSGLFHEEKPYWLVKNSWGPDWGQQGYFKIVRKDNKCGIATD 323

Query: 1019 AGYATI 1024
            A Y T+
Sbjct: 324  ASYPTV 329


>gi|327273973|ref|XP_003221753.1| PREDICTED: cathepsin O-like [Anolis carolinensis]
          Length = 376

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 139/269 (51%), Gaps = 21/269 (7%)

Query: 685 DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEV---EKDGP 741
           +G      YG ++FS   PEE             Y  + +   KV K   EV   E D P
Sbjct: 114 NGDNTTAFYGMNQFSHLFPEEF---------RAIY--LQSKSSKVPKFTPEVRVEEIDKP 162

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +P  +DWR K +     +Q  CG CWAFS+ G++E  +AIK   L E S  Q+++C+   
Sbjct: 163 LPAKFDWRDKGIVTKVRNQGVCGGCWAFSVVGIIESVHAIKRNVLEELSVQQVIDCSYIN 222

Query: 802 SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 861
           SGC G     ++ + +Q  ++  +D  Y +   E   C Y        + K +  ++ S+
Sbjct: 223 SGCRGGSPVGALGWINQTRVKLVRDSEY-HFQAETGLCRYFSRADFGVSIKGYAAYDLSD 281

Query: 862 T---MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
               MKK+L ++GPL+V++++    DY G  I+ +   CS  +  HAVL+ GY    +IP
Sbjct: 282 QEDKMKKLLLEWGPLAVVVDAASWQDYLGGIIQYH---CSSGEPNHAVLITGYDTTGSIP 338

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           +W+V+NSWGP    +G+ +I+ G+N CGI
Sbjct: 339 FWIVKNSWGPAWGIDGYVRIKIGSNVCGI 367



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 120/214 (56%), Gaps = 7/214 (3%)

Query: 6   EKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVE 65
           E D P+P  +DWR K +     +Q  CG CWAFS+ G++E  +AIK   L E S  Q+++
Sbjct: 158 EIDKPLPAKFDWRDKGIVTKVRNQGVCGGCWAFSVVGIIESVHAIKRNVLEELSVQQVID 217

Query: 66  CAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
           C+   SGC G     ++ + +Q  ++  +D  Y +   E   C Y        + K +  
Sbjct: 218 CSYINSGCRGGSPVGALGWINQTRVKLVRDSEY-HFQAETGLCRYFSRADFGVSIKGYAA 276

Query: 126 FNGSET---MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           ++ S+    MKK+L ++GPL+V++++    DY G  I+ +   CS  +  HAVL+ GY  
Sbjct: 277 YDLSDQEDKMKKLLLEWGPLAVVVDAASWQDYLGGIIQYH---CSSGEPNHAVLITGYDT 333

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
             +IP+W+V+NSWGP    +G+ +I+ G+N CGI
Sbjct: 334 TGSIPFWIVKNSWGPAWGIDGYVRIKIGSNVCGI 367



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 135/270 (50%), Gaps = 22/270 (8%)

Query: 319 DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEV---EKDGP 375
           +G      YG ++FS   PEE             Y  + +   KV K   EV   E D P
Sbjct: 114 NGDNTTAFYGMNQFSHLFPEEF---------RAIY--LQSKSSKVPKFTPEVRVEEIDKP 162

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P  +DWR K +     +Q  CG CWAFS+ G++E  +AIK   L E S  Q+++C+   
Sbjct: 163 LPAKFDWRDKGIVTKVRNQGVCGGCWAFSVVGIIESVHAIKRNVLEELSVQQVIDCSYIN 222

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS 495
           SGC G   +   + + +Q  ++  +D  Y +   E   C Y        + K +  ++ S
Sbjct: 223 SGCRGGSPV-GALGWINQTRVKLVRDSEY-HFQAETGLCRYFSRADFGVSIKGYAAYDLS 280

Query: 496 ET---MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI 552
           +    MKK+L ++GPL+V +++     Y G  I+ +   CS  +  HAVL+ GY     I
Sbjct: 281 DQEDKMKKLLLEWGPLAVVVDAASWQDYLGGIIQYH---CSSGEPNHAVLITGYDTTGSI 337

Query: 553 PYWLARNSWGPIGPDEGFFKIERGNNACGI 582
           P+W+ +NSWGP    +G+ +I+ G+N CGI
Sbjct: 338 PFWIVKNSWGPAWGIDGYVRIKIGSNVCGI 367



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS  +  HAVL+ GY     IP+W+V+NSWGP    +G+ +I+ G+N CGI
Sbjct: 317  CSSGEPNHAVLITGYDTTGSIPFWIVKNSWGPAWGIDGYVRIKIGSNVCGI 367


>gi|218478069|dbj|BAH03395.1| cathepsin L-like cysteine peptidase [Taenia solium]
          Length = 346

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 160/340 (47%), Gaps = 33/340 (9%)

Query: 640 TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER------FEYFKQDGHKKH--- 690
            + +E S       +   +  + ++ GR Y+  EE   R        Y K    + +   
Sbjct: 17  AVVVETSALLTERELSRQWAGWKLQHGRVYSGKEEAYRRGIFARNLLYIKGQNRRFNAGL 76

Query: 691 ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 748
           E Y  G ++F+D    E   +       R   R+   R ++ K L        +PD  DW
Sbjct: 77  ESYSTGLNQFADLESSEFSERF---LGTRPESRVAGRRGRIWKALASA---AGLPDTVDW 130

Query: 749 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDG 806
           R KN+     +Q  CGSCWAFS  G LEG +A KTGKL+  S+ QLV+C+ +    GC+G
Sbjct: 131 RDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLKNGNDGCNG 190

Query: 807 CFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MK 864
            +   + +Y  +  +E E  YPY+  +G    C Y++S + + T  D      G+ET + 
Sbjct: 191 GYMSYAFKYLEEHFIEPESAYPYRATDG---PCRYNES-LGVGTVTDIGDIPEGNETALM 246

Query: 865 KILYKYGPLSVLLNSDLIHDYNGTPIRKN-------DETCSPYDLGHAVLLVGYGKQDNI 917
           + +   GP+S+ +++  +       +  N          CS   L H VL +GYGKQD  
Sbjct: 247 EAVATVGPISIAIDASSLGFMFYRQVATNPHHGIYKSHWCSSKFLNHGVLAIGYGKQDGK 306

Query: 918 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           PYWLV+NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 307 PYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 346



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 161/341 (47%), Gaps = 34/341 (9%)

Query: 274 TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER------FEYFKQDGHKKH--- 324
            + +E S       +   +  + ++ GR Y+  EE   R        Y K    + +   
Sbjct: 17  AVVVETSALLTERELSRQWAGWKLQHGRVYSGKEEAYRRGIFARNLLYIKGQNRRFNAGL 76

Query: 325 ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 382
           E Y  G ++F+D    E   +       R   R+   R ++ K L        +PD  DW
Sbjct: 77  ESYSTGLNQFADLESSEFSERF---LGTRPESRVAGRRGRIWKALASA---AGLPDTVDW 130

Query: 383 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCD 442
           R KN+     +Q  CGSCWAFS  G LEG +A KTGKL+  S+ QLV+C+ + +G  GC+
Sbjct: 131 RDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLK-NGNDGCN 189

Query: 443 G--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSET-M 498
           G  +    +Y  +  +E E  YPYR  +G    C Y++S + + T  D      G+ET +
Sbjct: 190 GGYMSYAFKYLEEHFIEPESAYPYRATDG---PCRYNES-LGVGTVTDIGDIPEGNETAL 245

Query: 499 KKILYKYGPLSVGLNSHLIHFYNGTPIRKN-------DETCSPYDLGHAVLLVGYGKQDD 551
            + +   GP+S+ +++  + F     +  N          CS   L H VL +GYGKQD 
Sbjct: 246 MEAVATVGPISIAIDASSLGFMFYRQVATNPHHGIYKSHWCSSKFLNHGVLAIGYGKQDG 305

Query: 552 IPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
            PYWL +NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 306 KPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 346



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 123/227 (54%), Gaps = 16/227 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD  DWR KN+     +Q +CGSCWAFS  G LEG +A KTGKL+  S+ QLV+C+ + 
Sbjct: 124 LPDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLKN 183

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-N 127
              GC+G +   + +Y  +  +E E  YPY+  +G    C Y++S + + T  D      
Sbjct: 184 GNDGCNGGYMSYAFKYLEEHFIEPESAYPYRATDG---PCRYNES-LGVGTVTDIGDIPE 239

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKN-------DETCSPYDLGHAVLLVG 179
           G+ET + + +   GP+S+ +++  +       +  N          CS   L H VL +G
Sbjct: 240 GNETALMEAVATVGPISIAIDASSLGFMFYRQVATNPHHGIYKSHWCSSKFLNHGVLAIG 299

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           YGKQD  PYWLV+NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 300 YGKQDGKPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 346



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            CS   L H VL +GYGKQD  PYWLV+NSWG     +G+  + +  +N CG+  +A +  
Sbjct: 286  CSSKFLNHGVLAIGYGKQDGKPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPY 345

Query: 1024 I 1024
            +
Sbjct: 346  V 346


>gi|392873946|gb|AFM85805.1| cathepsin H [Callorhinchus milii]
          Length = 259

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 115/221 (52%), Gaps = 11/221 (4%)

Query: 740 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           GP PD  DWR K N   P  +Q  CGSCW FS  G LE   AIKTGKL+  ++ QLV+CA
Sbjct: 38  GPYPDFVDWRTKGNYVTPVKNQGGCGSCWTFSTTGCLESAIAIKTGKLLSLAEQQLVDCA 97

Query: 799 K--QCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK--D 853
              +  GC+G     + EY  +  GLE+EKDYPY     +   C Y  +K   F  +  +
Sbjct: 98  GAYKNHGCNGGLPSQAFEYIKYNGGLEAEKDYPY---TAQDQHCQYQPNKAVAFVKEVVN 154

Query: 854 FLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 912
              ++ +  +  +  +  P+S+    +D    Y G     ++   +P  + HAVL VGYG
Sbjct: 155 ITQYDENGIVDAVA-RLNPVSIAFEVTDDFFQYEGGVYSNSNCDSTPDKVNHAVLAVGYG 213

Query: 913 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
            Q+   YW+V+NSWGP     G+F I RG N CG+     Y
Sbjct: 214 VQNGTKYWIVKNSWGPEWGLNGYFYIIRGKNMCGLAACPSY 254



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 115/221 (52%), Gaps = 11/221 (4%)

Query: 9   GPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP PD  DWR K N   P  +Q  CGSCW FS  G LE   AIKTGKL+  ++ QLV+CA
Sbjct: 38  GPYPDFVDWRTKGNYVTPVKNQGGCGSCWTFSTTGCLESAIAIKTGKLLSLAEQQLVDCA 97

Query: 68  K--QCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK--D 122
              +  GC+G     + EY  +  GLE+EKDYPY     +   C Y  +K   F  +  +
Sbjct: 98  GAYKNHGCNGGLPSQAFEYIKYNGGLEAEKDYPY---TAQDQHCQYQPNKAVAFVKEVVN 154

Query: 123 FLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
              ++ +  +  +  +  P+S+    +D    Y G     ++   +P  + HAVL VGYG
Sbjct: 155 ITQYDENGIVDAVA-RLNPVSIAFEVTDDFFQYEGGVYSNSNCDSTPDKVNHAVLAVGYG 213

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
            Q+   YW+V+NSWGP     G+F I RG N CG+     Y
Sbjct: 214 VQNGTKYWIVKNSWGPEWGLNGYFYIIRGKNMCGLAACPSY 254



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 108/220 (49%), Gaps = 8/220 (3%)

Query: 374 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           GP PD  DWR K N   P  +Q  CGSCW FS  G LE   AIKTGKL+  ++ QLV+CA
Sbjct: 38  GPYPDFVDWRTKGNYVTPVKNQGGCGSCWTFSTTGCLESAIAIKTGKLLSLAEQQLVDCA 97

Query: 433 KQCSGCGGCDGL-EQPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFL 490
                 G   GL  Q  EY  +  GLE+EKDYPY     +   C Y  +K   F  +   
Sbjct: 98  GAYKNHGCNGGLPSQAFEYIKYNGGLEAEKDYPY---TAQDQHCQYQPNKAVAFVKEVVN 154

Query: 491 YFNGSET-MKKILYKYGPLSVGLNSHLIHF-YNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
                E  +   + +  P+S+        F Y G     ++   +P  + HAVL VGYG 
Sbjct: 155 ITQYDENGIVDAVARLNPVSIAFEVTDDFFQYEGGVYSNSNCDSTPDKVNHAVLAVGYGV 214

Query: 549 QDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
           Q+   YW+ +NSWGP     G+F I RG N CG+     Y
Sbjct: 215 QNGTKYWIVKNSWGPEWGLNGYFYIIRGKNMCGLAACPSY 254



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%)

Query: 966  SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            +P  + HAVL VGYG Q+   YW+V+NSWGP     G+F I RG N CG+     Y
Sbjct: 199  TPDKVNHAVLAVGYGVQNGTKYWIVKNSWGPEWGLNGYFYIIRGKNMCGLAACPSY 254


>gi|195382749|ref|XP_002050091.1| GJ20385 [Drosophila virilis]
 gi|194144888|gb|EDW61284.1| GJ20385 [Drosophila virilis]
          Length = 370

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 32/323 (9%)

Query: 289 LETFKAFIVKRGRQY--ANDEEIKER-FEYFKQDGHKKHERY---------GTSEFSDRS 336
           ++ F  F+ + G+ Y  A D +++E  F   K     K+  +           + F+D +
Sbjct: 60  VQDFGDFLAQSGKSYLSAADRQLREGIFSARKTLVEAKNAAFKSGASTYELAVNAFADLT 119

Query: 337 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
             E L + TG + S    +R      K  ++  ++  + P+PD++DWR+K    P   Q 
Sbjct: 120 NAEFLKQLTGLRKSLSGEQR-----AKAHRIAPKLATNVPLPDSFDWREKGGVTPVKFQG 174

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---TH 452
            CGSCW+F+  G +EG    KTGKL   S+  LV+C     G  GCDG  Q   +   T 
Sbjct: 175 ECGSCWSFAATGAIEGHVFRKTGKLPNLSEQNLVDCGTVDLGLAGCDGGFQEYAFNFITE 234

Query: 453 QAGLESEKDYPYRNGNGEKFKCAY--DKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSV 510
           Q G+ + + YPY +   +K  C Y  D S  ++ TG   +     + MK ++   GPL+ 
Sbjct: 235 QNGIAAGEKYPYVD---KKDTCKYKNDISGAQI-TGFAAIPPKDEQAMKTVVATQGPLAC 290

Query: 511 GLNS--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            +N    L+ +  G      DE C+  ++ H++L+VGYG +D   YW+ +NSW     ++
Sbjct: 291 SVNGLESLLLYKRGI---YADEECNKGEVNHSILVVGYGTEDGQDYWIVKNSWDKAWGED 347

Query: 569 GFFKIERGNNACGIEQIAGYATI 591
           G+F++ RG N CGI     Y  +
Sbjct: 348 GYFRLPRGKNFCGIASECSYPVV 370



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 160/323 (49%), Gaps = 33/323 (10%)

Query: 655 LETFKAFIVKRGRQY--ANDEEIKER-FEYFKQDGHKKHERY---------GTSEFSDRS 702
           ++ F  F+ + G+ Y  A D +++E  F   K     K+  +           + F+D +
Sbjct: 60  VQDFGDFLAQSGKSYLSAADRQLREGIFSARKTLVEAKNAAFKSGASTYELAVNAFADLT 119

Query: 703 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
             E L + TG + S    +R      K  ++  ++  + P+PD++DWR+K    P   Q 
Sbjct: 120 NAEFLKQLTGLRKSLSGEQR-----AKAHRIAPKLATNVPLPDSFDWREKGGVTPVKFQG 174

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK---QCSGCDGCFFEPSIEY-TH 817
            CGSCW+F+  G +EG    KTGKL   S+  LV+C       +GCDG F E +  + T 
Sbjct: 175 ECGSCWSFAATGAIEGHVFRKTGKLPNLSEQNLVDCGTVDLGLAGCDGGFQEYAFNFITE 234

Query: 818 QAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSV 875
           Q G+ + + YPY +   +K  C Y  D S  ++ TG   +     + MK ++   GPL+ 
Sbjct: 235 QNGIAAGEKYPYVD---KKDTCKYKNDISGAQI-TGFAAIPPKDEQAMKTVVATQGPLAC 290

Query: 876 LLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            +N    L+    G      DE C+  ++ H++L+VGYG +D   YW+V+NSW     ++
Sbjct: 291 SVNGLESLLLYKRGI---YADEECNKGEVNHSILVVGYGTEDGQDYWIVKNSWDKAWGED 347

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+F++ RG N CGI     Y  +
Sbjct: 348 GYFRLPRGKNFCGIASECSYPVV 370



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 121/224 (54%), Gaps = 15/224 (6%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK- 68
           P+PD++DWR+K    P   Q +CGSCW+F+  G +EG    KTGKL   S+  LV+C   
Sbjct: 154 PLPDSFDWREKGGVTPVKFQGECGSCWSFAATGAIEGHVFRKTGKLPNLSEQNLVDCGTV 213

Query: 69  --QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDF 123
               +GCDG F E +  + T Q G+ + + YPY +   +K  C Y  D S  ++ TG   
Sbjct: 214 DLGLAGCDGGFQEYAFNFITEQNGIAAGEKYPYVD---KKDTCKYKNDISGAQI-TGFAA 269

Query: 124 LHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           +     + MK ++   GPL+  +N    L+    G      DE C+  ++ H++L+VGYG
Sbjct: 270 IPPKDEQAMKTVVATQGPLACSVNGLESLLLYKRGI---YADEECNKGEVNHSILVVGYG 326

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            +D   YW+V+NSW     ++G+F++ RG N CGI     Y  +
Sbjct: 327 TEDGQDYWIVKNSWDKAWGEDGYFRLPRGKNFCGIASECSYPVV 370



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 40/63 (63%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            DE C+  ++ H++L+VGYG +D   YW+V+NSW     ++G+F++ RG N CGI     Y
Sbjct: 308  DEECNKGEVNHSILVVGYGTEDGQDYWIVKNSWDKAWGEDGYFRLPRGKNFCGIASECSY 367

Query: 1022 ATI 1024
              +
Sbjct: 368  PVV 370


>gi|71084306|gb|AAZ23598.1| cysteine protease [Leishmania major]
          Length = 327

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 152/337 (45%), Gaps = 35/337 (10%)

Query: 647 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTS-E 697
           L  DN      +  F  + G+ +  D +   RF  FKQ+         H  H  Y  S +
Sbjct: 4   LGVDNFIASAHYGRFKERHGKSFGEDADEGHRFNAFKQNMQTAYFLNTHNPHAHYDVSGK 63

Query: 698 FSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           F+D +P+E     L    +    + Y+  V   + V    M V          DWR+K  
Sbjct: 64  FADLTPQEFAKLYLNPDYYARRGKDYKEHVHVDDSVLSGAMSV----------DWREKVA 113

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI 813
             P  +Q  CGSCWAFS  G +E Q+A+K   LV  S+  LV C     GC+G   + ++
Sbjct: 114 VTPVKNQGMCGSCWAFSAIGNIESQWALKNHSLVSLSEQMLVSCDDIDDGCNGGLMDQAM 173

Query: 814 EYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKY 870
           E+    H   + +E+ YPY +A G    C +DK +            +  + +   + K 
Sbjct: 174 EWIIQHHNGTVPTEESYPYASAGGTSPPC-HDKGEFGARISGYMSLPHDEKAIAAYVEKK 232

Query: 871 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           GP++V +++     Y G  +      C  + L H VL+VG+ K+   PYW+V+NSWG   
Sbjct: 233 GPVAVAVDATTWQLYFGGVV----TLCFGWSLNHGVLVVGFNKRAKPPYWIVKNSWGTSW 288

Query: 931 PDEGFFKIERGNNACGIEQIAGYATIDVVKNDETCSP 967
            ++G+ ++  G+N C ++     AT+D    D   SP
Sbjct: 289 GEKGYIRLAMGSNQCLLKNYPVTATVD----DSNTSP 321



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 147/328 (44%), Gaps = 32/328 (9%)

Query: 281 LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTS-E 331
           L  DN      +  F  + G+ +  D +   RF  FKQ+         H  H  Y  S +
Sbjct: 4   LGVDNFIASAHYGRFKERHGKSFGEDADEGHRFNAFKQNMQTAYFLNTHNPHAHYDVSGK 63

Query: 332 FSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           F+D +P+E     L    +    + Y+  V   + V    M V          DWR+K  
Sbjct: 64  FADLTPQEFAKLYLNPDYYARRGKDYKEHVHVDDSVLSGAMSV----------DWREKVA 113

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQP 447
             P  +Q  CGSCWAFS  G +E Q+A+K   LV  S+  LV C     GC G   ++Q 
Sbjct: 114 VTPVKNQGMCGSCWAFSAIGNIESQWALKNHSLVSLSEQMLVSCDDIDDGCNG-GLMDQA 172

Query: 448 IEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYK 504
           +E+    H   + +E+ YPY +  G    C +DK +            +  + +   + K
Sbjct: 173 MEWIIQHHNGTVPTEESYPYASAGGTSPPC-HDKGEFGARISGYMSLPHDEKAIAAYVEK 231

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPI 564
            GP++V +++     Y G  +      C  + L H VL+VG+ K+   PYW+ +NSWG  
Sbjct: 232 KGPVAVAVDATTWQLYFGGVV----TLCFGWSLNHGVLVVGFNKRAKPPYWIVKNSWGTS 287

Query: 565 GPDEGFFKIERGNNACGIEQIAGYATID 592
             ++G+ ++  G+N C ++     AT+D
Sbjct: 288 WGEKGYIRLAMGSNQCLLKNYPVTATVD 315



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 110/214 (51%), Gaps = 8/214 (3%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR+K    P  +Q  CGSCWAFS  G +E Q+A+K   LV  S+  LV C     GC+G
Sbjct: 107 DWREKVAVTPVKNQGMCGSCWAFSAIGNIESQWALKNHSLVSLSEQMLVSCDDIDDGCNG 166

Query: 76  CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 132
              + ++E+    H   + +E+ YPY +A G    C +DK +            +  + +
Sbjct: 167 GLMDQAMEWIIQHHNGTVPTEESYPYASAGGTSPPC-HDKGEFGARISGYMSLPHDEKAI 225

Query: 133 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 192
              + K GP++V +++     Y G  +      C  + L H VL+VG+ K+   PYW+V+
Sbjct: 226 AAYVEKKGPVAVAVDATTWQLYFGGVV----TLCFGWSLNHGVLVVGFNKRAKPPYWIVK 281

Query: 193 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           NSWG    ++G+ ++  G+N C ++     AT+D
Sbjct: 282 NSWGTSWGEKGYIRLAMGSNQCLLKNYPVTATVD 315



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C  + L H VL+VG+ K+   PYW+V+NSWG    ++G+ ++  G+N C ++     AT+
Sbjct: 255  CFGWSLNHGVLVVGFNKRAKPPYWIVKNSWGTSWGEKGYIRLAMGSNQCLLKNYPVTATV 314

Query: 1025 D 1025
            D
Sbjct: 315  D 315


>gi|390476660|ref|XP_003735160.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin K [Callithrix jacchus]
          Length = 329

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 135/265 (50%), Gaps = 15/265 (5%)

Query: 696 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPTSYSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GC G +   + +
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQ 187

Query: 815 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP 872
           Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + GP
Sbjct: 188 YVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 244

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++ L      +     DE+C+  +L HAVL VGYG      +W+++NSWG    +
Sbjct: 245 ISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGILKGNKHWIIKNSWGENWGN 304

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NNACGI  +A +  +
Sbjct: 305 KGYILMARNKNNACGIANLASFPKM 329



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 120/221 (54%), Gaps = 6/221 (2%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C 
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV 171

Query: 68  KQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
            +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   + 
Sbjct: 172 SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIP 228

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG    
Sbjct: 229 EGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGILKG 288

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 289 NKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 135/266 (50%), Gaps = 16/266 (6%)

Query: 330 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPTSYSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
            P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  GCGG   +    
Sbjct: 128 TPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGG-GYMTNAF 186

Query: 449 EYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYG 506
           +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     + +K+ + + G
Sbjct: 187 QYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++ L  F   +     DE+C+  +L HAVL VGYG      +W+ +NSWG    
Sbjct: 244 PISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGILKGNKHWIIKNSWGENWG 303

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           ++G+  + R  NNACGI  +A +  +
Sbjct: 304 NKGYILMARNKNNACGIANLASFPKM 329



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG      +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 266  DESCNSDNLNHAVLAVGYGILKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325

Query: 1021 YATI 1024
            +  +
Sbjct: 326  FPKM 329


>gi|443708542|gb|ELU03619.1| hypothetical protein CAPTEDRAFT_17807 [Capitella teleta]
          Length = 350

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 157/341 (46%), Gaps = 34/341 (9%)

Query: 638 VDTLAIEGSLTFDNENILETF-KAFIVKRGRQYANDEEIKERFEYFK------QDGHKKH 690
            + L  + +L F N    E   + F     R Y   EE  +R E F+      Q  +  H
Sbjct: 22  TNILRPDTTLRFPNLVPFEKLWQDFKTVHERTYGETEE-SQRKEVFRNNLKKIQAHNHLH 80

Query: 691 E------RYGTSEFSDRSPEEILC-KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 743
           E      R G ++F+D    E      GF+ + RT       R+ +    +       VP
Sbjct: 81  EQGKSPYRMGINQFADMEANEFASIMNGFRMNNRT-----EVRDHLHANYISPAIPVSVP 135

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--C 801
              DWRK+    P  +Q  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+     
Sbjct: 136 AEVDWRKEGYVTPVKNQGQCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSTSYGN 195

Query: 802 SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNG 859
            GC+G   + + +Y     G ++E  YPY+  +G    C +    V    TG   L    
Sbjct: 196 EGCNGGIVDYAFQYIKDNDGDDTEACYPYEAVDG---TCRFKSVCVGATCTGYTDLPKGD 252

Query: 860 SETMKKILYKYGPLSVLLN---SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
              MK+ +   GP+SV ++   S      +G  +   ++ CSP  L HAVL+VGYG +  
Sbjct: 253 EAKMKEAVALVGPVSVAIDASHSSFQMYQSGIYV---EQECSPKQLDHAVLVVGYGTEQG 309

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
             YWLV+NSWG    DEG+ K+ R  +N CGI   A Y  +
Sbjct: 310 QDYWLVKNSWGTTWGDEGYIKMARNMDNQCGIASQASYPLV 350



 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 154/339 (45%), Gaps = 29/339 (8%)

Query: 272 VDTLAIEGSLTFDNENILETF-KAFIVKRGRQYANDEEIKERFEYFK------QDGHKKH 324
            + L  + +L F N    E   + F     R Y   EE  +R E F+      Q  +  H
Sbjct: 22  TNILRPDTTLRFPNLVPFEKLWQDFKTVHERTYGETEE-SQRKEVFRNNLKKIQAHNHLH 80

Query: 325 E------RYGTSEFSDRSPEEILC-KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 377
           E      R G ++F+D    E      GF+ + RT       R+ +    +       VP
Sbjct: 81  EQGKSPYRMGINQFADMEANEFASIMNGFRMNNRT-----EVRDHLHANYISPAIPVSVP 135

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
              DWRK+    P  +Q  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+    G
Sbjct: 136 AEVDWRKEGYVTPVKNQGQCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSTS-YG 194

Query: 438 CGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFN 493
             GC+G  ++   +Y     G ++E  YPY   +G    C +    V    TG   L   
Sbjct: 195 NEGCNGGIVDYAFQYIKDNDGDDTEACYPYEAVDG---TCRFKSVCVGATCTGYTDLPKG 251

Query: 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIP 553
               MK+ +   GP+SV +++    F         ++ CSP  L HAVL+VGYG +    
Sbjct: 252 DEAKMKEAVALVGPVSVAIDASHSSFQMYQSGIYVEQECSPKQLDHAVLVVGYGTEQGQD 311

Query: 554 YWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           YWL +NSWG    DEG+ K+ R  +N CGI   A Y  +
Sbjct: 312 YWLVKNSWGTTWGDEGYIKMARNMDNQCGIASQASYPLV 350



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 116/223 (52%), Gaps = 14/223 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           VP   DWRK+    P  +Q  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+   
Sbjct: 134 VPAEVDWRKEGYVTPVKNQGQCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSTSY 193

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHF 126
              GC+G   + + +Y     G ++E  YPY+  +G    C +    V    TG   L  
Sbjct: 194 GNEGCNGGIVDYAFQYIKDNDGDDTEACYPYEAVDG---TCRFKSVCVGATCTGYTDLPK 250

Query: 127 NGSETMKKILYKYGPLSVLLN---SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
                MK+ +   GP+SV ++   S      +G  +   ++ CSP  L HAVL+VGYG +
Sbjct: 251 GDEAKMKEAVALVGPVSVAIDASHSSFQMYQSGIYV---EQECSPKQLDHAVLVVGYGTE 307

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
               YWLV+NSWG    DEG+ K+ R  +N CGI   A Y  +
Sbjct: 308 QGQDYWLVKNSWGTTWGDEGYIKMARNMDNQCGIASQASYPLV 350



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            ++ CSP  L HAVL+VGYG +    YWLV+NSWG    DEG+ K+ R  +N CGI   A 
Sbjct: 287  EQECSPKQLDHAVLVVGYGTEQGQDYWLVKNSWGTTWGDEGYIKMARNMDNQCGIASQAS 346

Query: 1021 YATI 1024
            Y  +
Sbjct: 347  YPLV 350


>gi|163658591|gb|ABY28387.1| cathepsin L [Gnathostoma spinigerum]
          Length = 398

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 119/224 (53%), Gaps = 14/224 (6%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
           +PD  DWR  +      DQ  CGSCWAFS  G LEGQ+  KT +LV  S+  LV+C+++ 
Sbjct: 180 IPDTVDWRNSSYVTVVKDQGQCGSCWAFSATGALEGQHMRKTHQLVSLSEQNLVDCSRKY 239

Query: 801 -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF---- 854
             +GC+G   + + EY     G+++E+ YPYK   G+  KC +   + K    +D+    
Sbjct: 240 GNNGCNGGLMDNAFEYIKDNHGIDTEESYPYKGVEGK--KCHF---RRKFVGAEDYGYTD 294

Query: 855 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
           L     E +K  +   GP+SV +++  I   N       +  CSP DL H VL+VGYG  
Sbjct: 295 LPEGDEEALKVAVATIGPISVAIDAGHISFQNYRKGIYTENECSPEDLDHGVLVVGYGTD 354

Query: 915 DNI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +N   YW+V+NSWG    + G+ ++ R   N CGI   A Y  +
Sbjct: 355 ENAGDYWIVKNSWGTRWGEHGYIRMARNKRNQCGIASKASYPIV 398



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 119/224 (53%), Gaps = 14/224 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR  +      DQ  CGSCWAFS  G LEGQ+  KT +LV  S+  LV+C+++ 
Sbjct: 180 IPDTVDWRNSSYVTVVKDQGQCGSCWAFSATGALEGQHMRKTHQLVSLSEQNLVDCSRKY 239

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF---- 123
             +GC+G   + + EY     G+++E+ YPYK   G+  KC +   + K    +D+    
Sbjct: 240 GNNGCNGGLMDNAFEYIKDNHGIDTEESYPYKGVEGK--KCHF---RRKFVGAEDYGYTD 294

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           L     E +K  +   GP+SV +++  I   N       +  CSP DL H VL+VGYG  
Sbjct: 295 LPEGDEEALKVAVATIGPISVAIDAGHISFQNYRKGIYTENECSPEDLDHGVLVVGYGTD 354

Query: 184 DNI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           +N   YW+V+NSWG    + G+ ++ R   N CGI   A Y  +
Sbjct: 355 ENAGDYWIVKNSWGTRWGEHGYIRMARNKRNQCGIASKASYPIV 398



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 120/225 (53%), Gaps = 15/225 (6%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +PD  DWR  +      DQ  CGSCWAFS  G LEGQ+  KT +LV  S+  LV+C+++ 
Sbjct: 180 IPDTVDWRNSSYVTVVKDQGQCGSCWAFSATGALEGQHMRKTHQLVSLSEQNLVDCSRKY 239

Query: 436 SGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            G  GC+G  ++   EY     G+++E+ YPY+   G+  KC +   + K    +D+ Y 
Sbjct: 240 -GNNGCNGGLMDNAFEYIKDNHGIDTEESYPYKGVEGK--KCHF---RRKFVGAEDYGYT 293

Query: 493 N----GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK 548
           +      E +K  +   GP+SV +++  I F N       +  CSP DL H VL+VGYG 
Sbjct: 294 DLPEGDEEALKVAVATIGPISVAIDAGHISFQNYRKGIYTENECSPEDLDHGVLVVGYGT 353

Query: 549 QDDI-PYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
            ++   YW+ +NSWG    + G+ ++ R   N CGI   A Y  +
Sbjct: 354 DENAGDYWIVKNSWGTRWGEHGYIRMARNKRNQCGIASKASYPIV 398



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIE 1016
            +  +  CSP DL H VL+VGYG  ++   YW+V+NSWG    + G+ ++ R   N CGI 
Sbjct: 331  IYTENECSPEDLDHGVLVVGYGTDENAGDYWIVKNSWGTRWGEHGYIRMARNKRNQCGIA 390

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 391  SKASYPIV 398


>gi|213623956|gb|AAI70449.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 138/268 (51%), Gaps = 20/268 (7%)

Query: 330 SEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP--VPDAWDWRKKN 386
           ++  D + EE++   TG K         +  R K   +  E EK  P  VPD+ D+RKK 
Sbjct: 78  NQLGDMTSEEVVRTMTGLK---------IHKRNKPTNLTFEHEK-APEKVPDSIDYRKKG 127

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
              P  +Q +CGSCWAFS  G LEGQ   K GKLV  S   LV+C K+  GCGG   +  
Sbjct: 128 YVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVKKNDGCGG-GYMTN 186

Query: 447 PIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYK 504
             EY     G++SEK YPY    GE  +C Y+ S +     G   +     + +KK +  
Sbjct: 187 AFEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAAACKGYKEVQEGNEKALKKAVAL 243

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPI 564
            GP+SVG+++ L  F   +     D+ CS  D+ HAVL VGYG Q    YW+ +NSWG  
Sbjct: 244 VGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEE 303

Query: 565 GPDEGFFKIERGN-NACGIEQIAGYATI 591
             D+G+  + +   NACGI  +A Y  +
Sbjct: 304 WGDKGYILMAKDKGNACGIANLASYPVM 331



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/267 (36%), Positives = 137/267 (51%), Gaps = 19/267 (7%)

Query: 696 SEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP--VPDAWDWRKKN 752
           ++  D + EE++   TG K         +  R K   +  E EK  P  VPD+ D+RKK 
Sbjct: 78  NQLGDMTSEEVVRTMTGLK---------IHKRNKPTNLTFEHEK-APEKVPDSIDYRKKG 127

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
              P  +Q +CGSCWAFS  G LEGQ   K GKLV  S   LV+C K+  GC G +   +
Sbjct: 128 YVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVKKNDGCGGGYMTNA 187

Query: 813 IEYTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKY 870
            EY     G++SEK YPY    GE  +C Y+ S +     G   +     + +KK +   
Sbjct: 188 FEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAAACKGYKEVQEGNEKALKKAVALV 244

Query: 871 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           GP+SV +++ L      +     D+ CS  D+ HAVL VGYG Q    YW+V+NSWG   
Sbjct: 245 GPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEEW 304

Query: 931 PDEGFFKIERGN-NACGIEQIAGYATI 956
            D+G+  + +   NACGI  +A Y  +
Sbjct: 305 GDKGYILMAKDKGNACGIANLASYPVM 331



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   K GKLV  S   LV+C K+ 
Sbjct: 117 VPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVKKN 176

Query: 71  SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 128
            GC G +   + EY     G++SEK YPY    GE  +C Y+ S +     G   +    
Sbjct: 177 DGCGGGYMTNAFEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAAACKGYKEVQEGN 233

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +KK +   GP+SV +++ L      +     D+ CS  D+ HAVL VGYG Q    Y
Sbjct: 234 EKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKY 293

Query: 189 WLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           W+V+NSWG    D+G+  + +   NACGI  +A Y  +
Sbjct: 294 WIVKNSWGEEWGDKGYILMAKDKGNACGIANLASYPVM 331



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAG 1020
            D+ CS  D+ HAVL VGYG Q    YW+V+NSWG    D+G+  + +   NACGI  +A 
Sbjct: 268  DKDCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEEWGDKGYILMAKDKGNACGIANLAS 327

Query: 1021 YATI 1024
            Y  +
Sbjct: 328  YPVM 331


>gi|403355691|gb|EJY77431.1| Cathepsin H [Oxytricha trifallax]
          Length = 363

 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 161/358 (44%), Gaps = 44/358 (12%)

Query: 629 RITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF-EYFKQ--D 685
           +I+  V+  + +  +   +  + +NI++      V +       +EI  +F +Y+K   +
Sbjct: 3   KISASVILLLTSTLVLADINTEYQNIIDGESPISVDQV------DEIYSKFVQYYKSELN 56

Query: 686 GHKKHERYGTSEFSDRSP-----EEILC-----KTGFKWSERTYERIVADREKVEKMLME 735
           GH   E Y T+    +S      +EI+         +K     Y  +  D E  +   ++
Sbjct: 57  GHSPSENYSTNNVDRKSVFAHKLQEIIKHNSHDSASYKKGLNAYSDMT-DEEFFDYFNLK 115

Query: 736 VEKD-------------GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 782
            +++             G +P  WDWR   V  P  +Q  CGSCW FS  G LE  + +K
Sbjct: 116 ADQNCSATNRKTFGASNGSIPTNWDWRTYGVVSPVKNQGKCGSCWTFSTVGALESHFLLK 175

Query: 783 TGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKC 839
            G+    S+ QLV+CA      GC+G     + EY     G+  E  YPY         C
Sbjct: 176 YGQFRNLSEQQLVDCAGNYDNHGCNGGLPSHAFEYLKDNGGIAEETSYPYVAVTN---TC 232

Query: 840 AYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDET 896
           A  K    +      ++ + SE  +K+ +Y +GP+S+     SD   DY           
Sbjct: 233 ALKKGSQSVGVKGGAVNVSLSEDDLKQAIYSHGPVSIAFQVASDF-RDYRAGVYTSKVCK 291

Query: 897 CSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
             P D+ HAVL VG+G  +N + YW+++NSWG +  D+G+FK+ERG N CG+     Y
Sbjct: 292 NGPQDVNHAVLAVGFGTDENKVDYWIIKNSWGAVWGDQGYFKMERGVNMCGVSNCNSY 349



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 111/222 (50%), Gaps = 11/222 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           +G +P  WDWR   V  P  +Q  CGSCW FS  G LE  + +K G+    S+ QLV+CA
Sbjct: 132 NGSIPTNWDWRTYGVVSPVKNQGKCGSCWTFSTVGALESHFLLKYGQFRNLSEQQLVDCA 191

Query: 68  KQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
                 GC+G     + EY     G+  E  YPY         CA  K    +      +
Sbjct: 192 GNYDNHGCNGGLPSHAFEYLKDNGGIAEETSYPYVAVTN---TCALKKGSQSVGVKGGAV 248

Query: 125 HFNGSE-TMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           + + SE  +K+ +Y +GP+S+     SD   DY             P D+ HAVL VG+G
Sbjct: 249 NVSLSEDDLKQAIYSHGPVSIAFQVASDF-RDYRAGVYTSKVCKNGPQDVNHAVLAVGFG 307

Query: 182 KQDN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
             +N + YW+++NSWG +  D+G+FK+ERG N CG+     Y
Sbjct: 308 TDENKVDYWIIKNSWGAVWGDQGYFKMERGVNMCGVSNCNSY 349



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 158/360 (43%), Gaps = 47/360 (13%)

Query: 263 RITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF-EYFKQ--D 319
           +I+  V+  + +  +   +  + +NI++      V +       +EI  +F +Y+K   +
Sbjct: 3   KISASVILLLTSTLVLADINTEYQNIIDGESPISVDQV------DEIYSKFVQYYKSELN 56

Query: 320 GHKKHERYGTSEFSDRSP-----EEILC-----KTGFKWSERTYERIVADREKVEKMLME 369
           GH   E Y T+    +S      +EI+         +K     Y  +  D E  +   ++
Sbjct: 57  GHSPSENYSTNNVDRKSVFAHKLQEIIKHNSHDSASYKKGLNAYSDMT-DEEFFDYFNLK 115

Query: 370 VEKD-------------GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 416
            +++             G +P  WDWR   V  P  +Q  CGSCW FS  G LE  + +K
Sbjct: 116 ADQNCSATNRKTFGASNGSIPTNWDWRTYGVVSPVKNQGKCGSCWTFSTVGALESHFLLK 175

Query: 417 TGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYTH-QAGLESEKDYPYRNGNGEKFKC 474
            G+    S+ QLV+CA      G   GL     EY     G+  E  YPY         C
Sbjct: 176 YGQFRNLSEQQLVDCAGNYDNHGCNGGLPSHAFEYLKDNGGIAEETSYPYV---AVTNTC 232

Query: 475 AYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDET 531
           A  K    +      +  + SE  +K+ +Y +GP+S+     S    +  G    K    
Sbjct: 233 ALKKGSQSVGVKGGAVNVSLSEDDLKQAIYSHGPVSIAFQVASDFRDYRAGVYTSK---V 289

Query: 532 CS--PYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588
           C   P D+ HAVL VG+G  ++ + YW+ +NSWG +  D+G+FK+ERG N CG+     Y
Sbjct: 290 CKNGPQDVNHAVLAVGFGTDENKVDYWIIKNSWGAVWGDQGYFKMERGVNMCGVSNCNSY 349



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 5/72 (6%)

Query: 951  AGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG 1009
            AG  T  V KN     P D+ HAVL VG+G  ++ + YW+++NSWG +  D+G+FK+ERG
Sbjct: 282  AGVYTSKVCKN----GPQDVNHAVLAVGFGTDENKVDYWIIKNSWGAVWGDQGYFKMERG 337

Query: 1010 NNACGIEQIAGY 1021
             N CG+     Y
Sbjct: 338  VNMCGVSNCNSY 349


>gi|5823020|gb|AAD53012.1|AF089849_1 senescence-specific cysteine protease [Brassica napus]
          Length = 344

 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 155/316 (49%), Gaps = 32/316 (10%)

Query: 661 FIVKRGRQYANDEEIKERFEYFKQDGHKKHE----------RYGTSEFSDRSPEEILCK- 709
           ++ + GR YA+  E   R+  FK++  +             +   ++F+D + EE     
Sbjct: 41  WMTEHGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFADLTNEEFRSMY 100

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
           TGFK +      +++ R K      +      +P + DWRKK    P  DQ  CGSCWAF
Sbjct: 101 TGFKGNS-----VLSSRTKPTSFRYQNVSSDALPVSVDWRKKGAVTPIKDQGLCGSCWAF 155

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYP 828
           S    +EG   IK GKL+  S+ +LV+C     GC G   + +  YT    GL SE +YP
Sbjct: 156 SAVAAIEGVAQIKKGKLISLSEQELVDCDTNDGGCMGGLMDTAFNYTITIGGLTSESNYP 215

Query: 829 YKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSV-LLNSDLIHDY 885
           YK+ NG    C ++K+K    + K F  +  N  + + K +  + P+S+ +   D+   +
Sbjct: 216 YKSTNGT---CNFNKTKQIATSIKGFEDVPANDEKALMKAVAHH-PVSIGIAGGDIGFQF 271

Query: 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIERG--- 941
             + +   +  C+ + L H V  VGYG+  N + YW+++NSWGP   + G+ +I++    
Sbjct: 272 YSSGVFSGE--CTTH-LDHGVTAVGYGRSKNGLKYWILKNSWGPKWGERGYMRIKKDIKP 328

Query: 942 -NNACGIEQIAGYATI 956
            +  CG+   A Y T+
Sbjct: 329 KHGQCGLAMNASYPTM 344



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 154/318 (48%), Gaps = 35/318 (11%)

Query: 295 FIVKRGRQYANDEEIKERFEYFKQDGHKKHE----------RYGTSEFSDRSPEEILCK- 343
           ++ + GR YA+  E   R+  FK++  +             +   ++F+D + EE     
Sbjct: 41  WMTEHGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFADLTNEEFRSMY 100

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
           TGFK +      +++ R K      +      +P + DWRKK    P  DQ  CGSCWAF
Sbjct: 101 TGFKGNS-----VLSSRTKPTSFRYQNVSSDALPVSVDWRKKGAVTPIKDQGLCGSCWAF 155

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ-AGLESEKDY 462
           S    +EG   IK GKL+  S+ +LV+C     GC G   ++    YT    GL SE +Y
Sbjct: 156 SAVAAIEGVAQIKKGKLISLSEQELVDCDTNDGGCMG-GLMDTAFNYTITIGGLTSESNY 214

Query: 463 PYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLNSHLI--H 518
           PY++ NG    C ++K+K    + K F  +  N  + + K +  + P+S+G+    I   
Sbjct: 215 PYKSTNGT---CNFNKTKQIATSIKGFEDVPANDEKALMKAVAHH-PVSIGIAGGDIGFQ 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK-QDDIPYWLARNSWGPIGPDEGFFKIERG- 576
           FY+          C+ + L H V  VGYG+ ++ + YW+ +NSWGP   + G+ +I++  
Sbjct: 271 FYSSGVFSGE---CTTH-LDHGVTAVGYGRSKNGLKYWILKNSWGPKWGERGYMRIKKDI 326

Query: 577 ---NNACGIEQIAGYATI 591
              +  CG+   A Y T+
Sbjct: 327 KPKHGQCGLAMNASYPTM 344



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 119/224 (53%), Gaps = 16/224 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P + DWRKK    P  DQ  CGSCWAFS    +EG   IK GKL+  S+ +LV+C    
Sbjct: 128 LPVSVDWRKKGAVTPIKDQGLCGSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTND 187

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFN 127
            GC G   + +  YT    GL SE +YPYK+ NG    C ++K+K    + K F  +  N
Sbjct: 188 GGCMGGLMDTAFNYTITIGGLTSESNYPYKSTNGT---CNFNKTKQIATSIKGFEDVPAN 244

Query: 128 GSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN- 185
             + + K +  + P+S+ +   D+   +  + +   +  C+ + L H V  VGYG+  N 
Sbjct: 245 DEKALMKAVAHH-PVSIGIAGGDIGFQFYSSGVFSGE--CTTH-LDHGVTAVGYGRSKNG 300

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG----NNACGIEQIAGYATI 225
           + YW+++NSWGP   + G+ +I++     +  CG+   A Y T+
Sbjct: 301 LKYWILKNSWGPKWGERGYMRIKKDIKPKHGQCGLAMNASYPTM 344



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 5/60 (8%)

Query: 970  LGHAVLLVGYGK-QDDIPYWLVRNSWGPIGPDEGFFKIERG----NNACGIEQIAGYATI 1024
            L H V  VGYG+ ++ + YW+++NSWGP   + G+ +I++     +  CG+   A Y T+
Sbjct: 285  LDHGVTAVGYGRSKNGLKYWILKNSWGPKWGERGYMRIKKDIKPKHGQCGLAMNASYPTM 344


>gi|168057475|ref|XP_001780740.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667829|gb|EDQ54449.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 463

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 164/331 (49%), Gaps = 40/331 (12%)

Query: 644 EGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHER---YGT 695
           EG+    ++ IL+ F  ++    R Y +  E   RF+ FK++      H K ++    G 
Sbjct: 35  EGNQLHSDDAILDVFHQWLETHSRVYRSLSEKHHRFQIFKENFLYIHAHNKQQKSYWLGL 94

Query: 696 SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 755
           ++FSD + +E      F+      + +   R++   M  +VE +  V    DWR K    
Sbjct: 95  NKFSDLTHQE------FRAQYLGTKPVNRQRKEANFMYEDVEAEPKV----DWRLKGAVT 144

Query: 756 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC-AKQCSGCDGCFFEPSIE 814
              DQ ACGSCWAFS  G +EG  AIKTG+LV  S+ +LV+C  KQ  GC+G   + + E
Sbjct: 145 DVKDQGACGSCWAFSAVGSVEGVNAIKTGELVSLSEQELVDCDRKQNQGCNGGLMDYAFE 204

Query: 815 Y-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYG 871
           +     G+++EKDYPYK  +G   +C   +   K+    D+  +       + K L K  
Sbjct: 205 FIIKNGGIDTEKDYPYKARDG---RCDEGRRNSKVVVIDDYQDVPTQSESALMKALTK-N 260

Query: 872 PLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWG 927
           P+SV + +   D  H Y G         C   +L H VL VGYG  D+ + YW+V+NSWG
Sbjct: 261 PVSVAIEAGGRDFQH-YQGGVFTG---PCGS-ELDHGVLAVGYGTDDDGVNYWIVKNSWG 315

Query: 928 PIGPDEGFFKIER-----GNNACGIEQIAGY 953
           P   ++G+ ++ER      +  CGI   A +
Sbjct: 316 PGWGEKGYIRMERFGSDSTDGKCGINIEASF 346



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 161/332 (48%), Gaps = 41/332 (12%)

Query: 278 EGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHER---YGT 329
           EG+    ++ IL+ F  ++    R Y +  E   RF+ FK++      H K ++    G 
Sbjct: 35  EGNQLHSDDAILDVFHQWLETHSRVYRSLSEKHHRFQIFKENFLYIHAHNKQQKSYWLGL 94

Query: 330 SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 389
           ++FSD + +E      F+      + +   R++   M  +VE +  V    DWR K    
Sbjct: 95  NKFSDLTHQE------FRAQYLGTKPVNRQRKEANFMYEDVEAEPKV----DWRLKGAVT 144

Query: 390 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC-AKQCSGCGGCDGLEQPI 448
              DQ ACGSCWAFS  G +EG  AIKTG+LV  S+ +LV+C  KQ  GC G   ++   
Sbjct: 145 DVKDQGACGSCWAFSAVGSVEGVNAIKTGELVSLSEQELVDCDRKQNQGCNG-GLMDYAF 203

Query: 449 EY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKY 505
           E+     G+++EKDYPY+  +G   +C   +   K+    D+  +       + K L K 
Sbjct: 204 EFIIKNGGIDTEKDYPYKARDG---RCDEGRRNSKVVVIDDYQDVPTQSESALMKALTK- 259

Query: 506 GPLSVGLNS---HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSW 561
            P+SV + +      H+  G         C   +L H VL VGYG  DD + YW+ +NSW
Sbjct: 260 NPVSVAIEAGGRDFQHYQGGVFT----GPCGS-ELDHGVLAVGYGTDDDGVNYWIVKNSW 314

Query: 562 GPIGPDEGFFKIER-----GNNACGIEQIAGY 588
           GP   ++G+ ++ER      +  CGI   A +
Sbjct: 315 GPGWGEKGYIRMERFGSDSTDGKCGINIEASF 346



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/235 (36%), Positives = 121/235 (51%), Gaps = 26/235 (11%)

Query: 1   MLMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSK 60
           M  +VE +  V    DWR K       DQ  CGSCWAFS  G +EG  AIKTG+LV  S+
Sbjct: 125 MYEDVEAEPKV----DWRLKGAVTDVKDQGACGSCWAFSAVGSVEGVNAIKTGELVSLSE 180

Query: 61  SQLVEC-AKQCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
            +LV+C  KQ  GC+G   + + E+     G+++EKDYPYK  +G   +C   +   K+ 
Sbjct: 181 QELVDCDRKQNQGCNGGLMDYAFEFIIKNGGIDTEKDYPYKARDG---RCDEGRRNSKVV 237

Query: 119 TGKDF--LHFNGSETMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGH 173
              D+  +       + K L K  P+SV + +   D  H Y G         C   +L H
Sbjct: 238 VIDDYQDVPTQSESALMKALTK-NPVSVAIEAGGRDFQH-YQGGVFTG---PCGS-ELDH 291

Query: 174 AVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIER-----GNNACGIEQIAGY 222
            VL VGYG  D+ + YW+V+NSWGP   ++G+ ++ER      +  CGI   A +
Sbjct: 292 GVLAVGYGTDDDGVNYWIVKNSWGPGWGEKGYIRMERFGSDSTDGKCGINIEASF 346



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)

Query: 969  DLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIER-----GNNACGIEQIAGY 1021
            +L H VL VGYG  DD + YW+V+NSWGP   ++G+ ++ER      +  CGI   A +
Sbjct: 288  ELDHGVLAVGYGTDDDGVNYWIVKNSWGPGWGEKGYIRMERFGSDSTDGKCGINIEASF 346


>gi|2961621|gb|AAC05781.1| cathepsin S [Mus musculus]
          Length = 340

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 132/271 (48%), Gaps = 21/271 (7%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G ++  D + EEI C+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEISCRMGALRISRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCGGCDG 443
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GCGG   
Sbjct: 135 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 194

Query: 444 LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKI 501
            E         G+E++  YPY+       KC Y+ SK +  T   +  L F   + +K+ 
Sbjct: 195 TEAFQYIIDNGGIEADASYPYK---ATDEKCHYN-SKNRAATCSRYIQLPFGDEDALKEA 250

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
           +   GP+SVG+++    F+       +D +C+  ++ H VL+VGYG  D   YWL +NSW
Sbjct: 251 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 309

Query: 562 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 310 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 22/271 (8%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G ++  D + EEI C+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEISCRMGALRISRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFF 809
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GC G + 
Sbjct: 135 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 194

Query: 810 EPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGSETMKKI 866
             + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++   F   + +K+ 
Sbjct: 195 TEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SKNRAATCSRYIQLPFGDEDALKEA 250

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926
           +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  D   YWLV+NSW
Sbjct: 251 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 309

Query: 927 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 310 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR+K        Q  CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ + 
Sbjct: 123 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 182

Query: 70  ---CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++ 
Sbjct: 183 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SKNRAATCSRYIQ 238

Query: 126 --FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
             F   + +K+ +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  
Sbjct: 239 LPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTL 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 298 DGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V +D +C+  ++ H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI  
Sbjct: 275  VYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIAS 333

Query: 1018 IAGYATI 1024
               Y  I
Sbjct: 334  YCSYPEI 340


>gi|118425914|gb|ABK90856.1| cathepsin-L-like cysteine peptidase [Radix peregra]
          Length = 324

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 156/320 (48%), Gaps = 44/320 (13%)

Query: 661 FIVKRGRQYANDEEIKERFEYFKQDGHKKHERY-------------GTSEFSDRSPEEIL 707
           F  K  + Y+ DE+I  R  Y  Q   +K E +             G ++++D + EE  
Sbjct: 25  FKAKHNKTYSGDEDIIRR--YIWQTNLQKIEAHNELYAKGLSTYFLGENKYADMTNEEF- 81

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
                    RT   +  D+E      +       +P A DWRK+       DQ  CGSCW
Sbjct: 82  --------RRTLSGLRVDKELTPGDFVSGMFKDSLPTAVDWRKEGYVTEVKDQGQCGSCW 133

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEY-THQAGLESE 824
           AFS  G LEGQ+   T +LV  S+S LV+C+K+    GC+G   + + +Y     G+++E
Sbjct: 134 AFSTTGSLEGQHFKATKQLVSLSESNLVDCSKKWGNQGCNGGLMDNAFKYIADNKGIDTE 193

Query: 825 KDYPYKNANGEKFKCAYDKSKV----KLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNS 879
           K YPYK    E  KC + K+ V    KL+  KD    +GSE  +++ +   GP+SV +++
Sbjct: 194 KSYPYK---PEDRKCNFKKANVGATDKLY--KDIT--SGSEDALQEAVATIGPISVAIDA 246

Query: 880 --DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
             D    Y+G     N++ CS   L H VL VGY  ++   YW+V+NSWG     +G+  
Sbjct: 247 SHDSFQLYSGGVY--NEKACSTKTLDHGVLAVGYDSKNGDDYWIVKNSWGKSWGIDGYIW 304

Query: 938 IERG-NNACGIEQIAGYATI 956
           + R   N CGI  +A Y  +
Sbjct: 305 MSRNKKNQCGIATMASYPVV 324



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 152/318 (47%), Gaps = 39/318 (12%)

Query: 295 FIVKRGRQYANDEEIKERFEYFKQDGHKKHERY-------------GTSEFSDRSPEEIL 341
           F  K  + Y+ DE+I  R  Y  Q   +K E +             G ++++D + EE  
Sbjct: 25  FKAKHNKTYSGDEDIIRR--YIWQTNLQKIEAHNELYAKGLSTYFLGENKYADMTNEEF- 81

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
                    RT   +  D+E      +       +P A DWRK+       DQ  CGSCW
Sbjct: 82  --------RRTLSGLRVDKELTPGDFVSGMFKDSLPTAVDWRKEGYVTEVKDQGQCGSCW 133

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEY-THQAGLES 458
           AFS  G LEGQ+   T +LV  S+S LV+C+K+  G  GC+G  ++   +Y     G+++
Sbjct: 134 AFSTTGSLEGQHFKATKQLVSLSESNLVDCSKKW-GNQGCNGGLMDNAFKYIADNKGIDT 192

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLY---FNGSE-TMKKILYKYGPLSVGLNS 514
           EK YPY+    E  KC + K+ V      D LY    +GSE  +++ +   GP+SV +++
Sbjct: 193 EKSYPYK---PEDRKCNFKKANVG---ATDKLYKDITSGSEDALQEAVATIGPISVAIDA 246

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
               F   +    N++ CS   L H VL VGY  ++   YW+ +NSWG     +G+  + 
Sbjct: 247 SHDSFQLYSGGVYNEKACSTKTLDHGVLAVGYDSKNGDDYWIVKNSWGKSWGIDGYIWMS 306

Query: 575 RG-NNACGIEQIAGYATI 591
           R   N CGI  +A Y  +
Sbjct: 307 RNKKNQCGIATMASYPVV 324



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 124/227 (54%), Gaps = 20/227 (8%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
            +P A DWRK+       DQ  CGSCWAFS  G LEGQ+   T +LV  S+S LV+C+K+
Sbjct: 107 SLPTAVDWRKEGYVTEVKDQGQCGSCWAFSTTGSLEGQHFKATKQLVSLSESNLVDCSKK 166

Query: 70  C--SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKV----KLFTGKD 122
               GC+G   + + +Y     G+++EK YPYK    E  KC + K+ V    KL+  KD
Sbjct: 167 WGNQGCNGGLMDNAFKYIADNKGIDTEKSYPYK---PEDRKCNFKKANVGATDKLY--KD 221

Query: 123 FLHFNGSE-TMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
               +GSE  +++ +   GP+SV +++  D    Y+G     N++ CS   L H VL VG
Sbjct: 222 IT--SGSEDALQEAVATIGPISVAIDASHDSFQLYSGGVY--NEKACSTKTLDHGVLAVG 277

Query: 180 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           Y  ++   YW+V+NSWG     +G+  + R   N CGI  +A Y  +
Sbjct: 278 YDSKNGDDYWIVKNSWGKSWGIDGYIWMSRNKKNQCGIATMASYPVV 324



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V N++ CS   L H VL VGY  ++   YW+V+NSWG     +G+  + R   N CGI  
Sbjct: 258  VYNEKACSTKTLDHGVLAVGYDSKNGDDYWIVKNSWGKSWGIDGYIWMSRNKKNQCGIAT 317

Query: 1018 IAGYATI 1024
            +A Y  +
Sbjct: 318  MASYPVV 324


>gi|23110964|ref|NP_001326.2| cathepsin W preproprotein [Homo sapiens]
 gi|29476894|gb|AAH48255.1| Cathepsin W [Homo sapiens]
 gi|119594870|gb|EAW74464.1| cathepsin W (lymphopain), isoform CRA_b [Homo sapiens]
          Length = 376

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 156/346 (45%), Gaps = 43/346 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  + I     V+ S  +L++C +   GC G F ++  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIH 883
           KDYP++       +C + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQ 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN--------------------IPYWLVR 923
            Y    I+    TC P  + H+VLLVG+G   +                     PYW+++
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILK 330

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV--VKNDETCSP 967
           NSWG    ++G+F++ RG+N CGI +    A +    +K   +C P
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARVQKPDMKPRVSCPP 376



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 148/333 (44%), Gaps = 40/333 (12%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  + I     V+ S  +L++C +   GC G    +  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSETMKKILYKYGPLSVGLNSHLIH 518
           KDYP++ G     +C + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQ 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDDIPYWLAR 558
            Y    I+    TC P  + H+VLLVG+G                         PYW+ +
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILK 330

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 25/243 (10%)

Query: 6   EKDGPVPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           E +  VP + DWRK      P  DQ +C  CWA + AG +E  + I     V+ S  +L+
Sbjct: 123 EPEESVPFSCDWRKVAGAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELL 182

Query: 65  ECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C +   GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF
Sbjct: 183 DCGRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDF 240

Query: 124 LHF-NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +   N    + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G 
Sbjct: 241 IMLQNNEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGS 300

Query: 183 QDN--------------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
             +                     PYW+++NSWG    ++G+F++ RG+N CGI +    
Sbjct: 301 VKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360

Query: 223 ATI 225
           A +
Sbjct: 361 ARV 363



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 20/81 (24%)

Query: 964  TCSPYDLGHAVLLVGYGK--------------------QDDIPYWLVRNSWGPIGPDEGF 1003
            TC P  + H+VLLVG+G                         PYW+++NSWG    ++G+
Sbjct: 283  TCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGY 342

Query: 1004 FKIERGNNACGIEQIAGYATI 1024
            F++ RG+N CGI +    A +
Sbjct: 343  FRLHRGSNTCGITKFPLTARV 363


>gi|302794759|ref|XP_002979143.1| hypothetical protein SELMODRAFT_110288 [Selaginella moellendorffii]
 gi|300152911|gb|EFJ19551.1| hypothetical protein SELMODRAFT_110288 [Selaginella moellendorffii]
          Length = 227

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 115/212 (54%), Gaps = 8/212 (3%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +P ++DWR+     P  +Q +CGSCW FS  G +EG + +K+ +L+   + QLV+C +  
Sbjct: 9   LPKSFDWREHGAMTPVKNQGSCGSCWTFSSTGAVEGAHFLKSRELISLREEQLVDCDRMD 68

Query: 802 SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKF-----KCAYDKSKVKLFTGKDFLH 856
            GC G     + EY    GLE+E+DYPY+  N +++     +C +  SKV          
Sbjct: 69  GGCKGGDMLNAYEYIKAKGLEAEEDYPYQEENYKEYMFPHHRCHFRPSKVAATIANYSTV 128

Query: 857 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQD 915
               + +   L K GPLS+ LN++ I DY G         C   D + HAVLLVGYG   
Sbjct: 129 SEDEDQIAANLVKNGPLSIALNANYIMDYMGG--VACPRICPGGDNMNHAVLLVGYGMDG 186

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           + PYW+++NSW     ++G+F++ RG   CG+
Sbjct: 187 DKPYWILKNSWSENYGEDGYFRLCRGFGVCGM 218



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 8/212 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P ++DWR+     P  +Q  CGSCW FS  G +EG + +K+ +L+   + QLV+C +  
Sbjct: 9   LPKSFDWREHGAMTPVKNQGSCGSCWTFSSTGAVEGAHFLKSRELISLREEQLVDCDRMD 68

Query: 71  SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKF-----KCAYDKSKVKLFTGKDFLH 125
            GC G     + EY    GLE+E+DYPY+  N +++     +C +  SKV          
Sbjct: 69  GGCKGGDMLNAYEYIKAKGLEAEEDYPYQEENYKEYMFPHHRCHFRPSKVAATIANYSTV 128

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQD 184
               + +   L K GPLS+ LN++ I DY G         C   D + HAVLLVGYG   
Sbjct: 129 SEDEDQIAANLVKNGPLSIALNANYIMDYMGG--VACPRICPGGDNMNHAVLLVGYGMDG 186

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           + PYW+++NSW     ++G+F++ RG   CG+
Sbjct: 187 DKPYWILKNSWSENYGEDGYFRLCRGFGVCGM 218



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 114/213 (53%), Gaps = 9/213 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +P ++DWR+     P  +Q +CGSCW FS  G +EG + +K+ +L+   + QLV+C +  
Sbjct: 9   LPKSFDWREHGAMTPVKNQGSCGSCWTFSSTGAVEGAHFLKSRELISLREEQLVDCDRMD 68

Query: 436 SGCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKF-----KCAYDKSKVKLFTGKDFL 490
            GC G D L    EY    GLE+E+DYPY+  N +++     +C +  SKV         
Sbjct: 69  GGCKGGDML-NAYEYIKAKGLEAEEDYPYQEENYKEYMFPHHRCHFRPSKVAATIANYST 127

Query: 491 YFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQ 549
                + +   L K GPLS+ LN++ I  Y G         C   D + HAVLLVGYG  
Sbjct: 128 VSEDEDQIAANLVKNGPLSIALNANYIMDYMGG--VACPRICPGGDNMNHAVLLVGYGMD 185

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
            D PYW+ +NSW     ++G+F++ RG   CG+
Sbjct: 186 GDKPYWILKNSWSENYGEDGYFRLCRGFGVCGM 218



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            ++ HAVLLVGYG   D PYW+++NSW     ++G+F++ RG   CG+
Sbjct: 172  NMNHAVLLVGYGMDGDKPYWILKNSWSENYGEDGYFRLCRGFGVCGM 218


>gi|390368662|ref|XP_780781.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 158/337 (46%), Gaps = 35/337 (10%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GH 687
           + +  SL+    +  E +  +  + G++Y +DEE   R   ++++             GH
Sbjct: 11  VCVVSSLSMSFTDFDEDWNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGH 70

Query: 688 KKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPD 744
             +   G ++F+D   EE +   TGF+         V    K  K    +       +P 
Sbjct: 71  FTYA-LGMNQFADLQNEEFVAMMTGFR---------VNGTSKAAKGSTFLPSNNVDKLPK 120

Query: 745 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 804
             DWR K    P  DQ  CGSCWAFS  G LEGQ   KTGKLV  S+  LV+C+ +  GC
Sbjct: 121 TVDWRTKGYVTPVKDQGQCGSCWAFSATGSLEGQQFKKTGKLVSLSEQNLVDCSYRNYGC 180

Query: 805 DGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSET 862
            G F + + +Y   A G+++E  Y Y+  +G    C + K+ V    TG   +     + 
Sbjct: 181 HGGFMDRAFQYIIDAGGIDTEATYSYRAVDGN---CHFKKANVGATVTGYTDVTSGSEKA 237

Query: 863 MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYW 920
           ++K +   GP+SV ++ S     +  + +  N+  CS   LGHAVL+VGYG   D   YW
Sbjct: 238 LQKAVAHIGPISVAIDASHKFFKFYKSGVY-NEPGCSTTRLGHAVLVVGYGTTSDGTDYW 296

Query: 921 LVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +V+NSW       G+  + R  +N CGI   A Y  +
Sbjct: 297 IVKNSWAKTWGMNGYLWMSRNKDNQCGIASEASYPMV 333



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 115/220 (52%), Gaps = 9/220 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P   DWR K    P  DQ  CGSCWAFS  G LEGQ   KTGKLV  S+  LV+C+ + 
Sbjct: 118 LPKTVDWRTKGYVTPVKDQGQCGSCWAFSATGSLEGQQFKKTGKLVSLSEQNLVDCSYRN 177

Query: 71  SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNG 128
            GC G F + + +Y   A G+++E  Y Y+  +G    C + K+ V    TG   +    
Sbjct: 178 YGCHGGFMDRAFQYIIDAGGIDTEATYSYRAVDGN---CHFKKANVGATVTGYTDVTSGS 234

Query: 129 SETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNI 186
            + ++K +   GP+SV ++ S     +  + +  N+  CS   LGHAVL+VGYG   D  
Sbjct: 235 EKALQKAVAHIGPISVAIDASHKFFKFYKSGVY-NEPGCSTTRLGHAVLVVGYGTTSDGT 293

Query: 187 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            YW+V+NSW       G+  + R  +N CGI   A Y  +
Sbjct: 294 DYWIVKNSWAKTWGMNGYLWMSRNKDNQCGIASEASYPMV 333



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GH 321
           + +  SL+    +  E +  +  + G++Y +DEE   R   ++++             GH
Sbjct: 11  VCVVSSLSMSFTDFDEDWNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGH 70

Query: 322 KKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPD 378
             +   G ++F+D   EE +   TGF+         V    K  K    +       +P 
Sbjct: 71  FTYA-LGMNQFADLQNEEFVAMMTGFR---------VNGTSKAAKGSTFLPSNNVDKLPK 120

Query: 379 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 438
             DWR K    P  DQ  CGSCWAFS  G LEGQ   KTGKLV  S+  LV+C+ +  GC
Sbjct: 121 TVDWRTKGYVTPVKDQGQCGSCWAFSATGSLEGQQFKKTGKLVSLSEQNLVDCSYRNYGC 180

Query: 439 GGCDGLEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSE 496
            G   +++  +Y   A G+++E  Y YR  +G    C + K+ V    TG   +     +
Sbjct: 181 HG-GFMDRAFQYIIDAGGIDTEATYSYRAVDGN---CHFKKANVGATVTGYTDVTSGSEK 236

Query: 497 TMKKILYKYGPLSVGLN-SH-LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IP 553
            ++K +   GP+SV ++ SH    FY       N+  CS   LGHAVL+VGYG   D   
Sbjct: 237 ALQKAVAHIGPISVAIDASHKFFKFYKSGVY--NEPGCSTTRLGHAVLVVGYGTTSDGTD 294

Query: 554 YWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           YW+ +NSW       G+  + R  +N CGI   A Y  +
Sbjct: 295 YWIVKNSWAKTWGMNGYLWMSRNKDNQCGIASEASYPMV 333



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIE 1016
            V N+  CS   LGHAVL+VGYG   D   YW+V+NSW       G+  + R  +N CGI 
Sbjct: 266  VYNEPGCSTTRLGHAVLVVGYGTTSDGTDYWIVKNSWAKTWGMNGYLWMSRNKDNQCGIA 325

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 326  SEASYPMV 333


>gi|332024588|gb|EGI64786.1| Cathepsin O [Acromyrmex echinatior]
          Length = 356

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 35/320 (10%)

Query: 656 ETFKAFIVKRGRQYAND-EEIKERFEYFKQD-----------GHKKHERYGTSEFSDRSP 703
           E F  +I +  + Y ND  + +ERFE+F++              ++   YG +EFSD S 
Sbjct: 34  ELFANYIARYNKSYRNDPAKYEERFEHFQKSLRHIEKLNSLRSSQESAYYGLTEFSDLSD 93

Query: 704 EEILCKT--------GFKWSERTY--ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           +E + +         G K +  +Y  +  +    ++++M+  +     +P  +DWR K V
Sbjct: 94  DEFIQQALIPDLPLRGQKHTTASYYHQHFMGSVNRMKRMIPII----GIPSKFDWRDKGV 149

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI 813
            GP   Q  CG+CWAFS  G+ E  YAI+ G L  FS  ++++C     GC G      +
Sbjct: 150 VGPVMSQENCGACWAFSTVGVAESMYAIENGTLHSFSVQEMIDCMPGNFGCQGGDICSLL 209

Query: 814 EY--THQAGLESEKDYP--YKNANGEKFKCAYDKSKVKL--FTGKDFLHFNGSETMKKIL 867
            +    +  + SE DYP   +       K +   S V++  FT   F+  +    +  +L
Sbjct: 210 SWLLASKTRIISEIDYPLTLQTDTCRLHKISAKTSGVRITDFTCDSFV--DAETELLTLL 267

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927
             +GP++V +N+    +Y G  I+ N ++ S   L HAV +VGY  +  IP+++++NSWG
Sbjct: 268 VTHGPVAVAVNAISWQNYLGGIIQYNCDS-SFNSLNHAVQIVGYDTEARIPHYIIKNSWG 326

Query: 928 PIGPDEGFFKIERGNNACGI 947
           P   ++G+  I  G N CGI
Sbjct: 327 PSFGNKGYIYIAVGKNLCGI 346



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 157/322 (48%), Gaps = 38/322 (11%)

Query: 290 ETFKAFIVKRGRQYAND-EEIKERFEYFKQD-----------GHKKHERYGTSEFSDRSP 337
           E F  +I +  + Y ND  + +ERFE+F++              ++   YG +EFSD S 
Sbjct: 34  ELFANYIARYNKSYRNDPAKYEERFEHFQKSLRHIEKLNSLRSSQESAYYGLTEFSDLSD 93

Query: 338 EEILCKT--------GFKWSERTY--ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           +E + +         G K +  +Y  +  +    ++++M+  +     +P  +DWR K V
Sbjct: 94  DEFIQQALIPDLPLRGQKHTTASYYHQHFMGSVNRMKRMIPII----GIPSKFDWRDKGV 149

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG---CDGL 444
            GP   Q  CG+CWAFS  G+ E  YAI+ G L  FS  ++++C     GC G   C  L
Sbjct: 150 VGPVMSQENCGACWAFSTVGVAESMYAIENGTLHSFSVQEMIDCMPGNFGCQGGDICSLL 209

Query: 445 EQPIEYTHQAGLESEKDYP--YRNGNGEKFKCAYDKSKVKL--FTGKDFLYFNGSETMKK 500
              +    +  + SE DYP   +       K +   S V++  FT   F+  +    +  
Sbjct: 210 SWLL--ASKTRIISEIDYPLTLQTDTCRLHKISAKTSGVRITDFTCDSFV--DAETELLT 265

Query: 501 ILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNS 560
           +L  +GP++V +N+     Y G  I+ N ++ S   L HAV +VGY  +  IP+++ +NS
Sbjct: 266 LLVTHGPVAVAVNAISWQNYLGGIIQYNCDS-SFNSLNHAVQIVGYDTEARIPHYIIKNS 324

Query: 561 WGPIGPDEGFFKIERGNNACGI 582
           WGP   ++G+  I  G N CGI
Sbjct: 325 WGPSFGNKGYIYIAVGKNLCGI 346



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 9/212 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K V GP   Q +CG+CWAFS  G+ E  YAI+ G L  FS  ++++C    
Sbjct: 138 IPSKFDWRDKGVVGPVMSQENCGACWAFSTVGVAESMYAIENGTLHSFSVQEMIDCMPGN 197

Query: 71  SGCDGCFFEPSIEY--THQAGLESEKDYP--YKNANGEKFKCAYDKSKVKL--FTGKDFL 124
            GC G      + +    +  + SE DYP   +       K +   S V++  FT   F+
Sbjct: 198 FGCQGGDICSLLSWLLASKTRIISEIDYPLTLQTDTCRLHKISAKTSGVRITDFTCDSFV 257

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
             +    +  +L  +GP++V +N+    +Y G  I+ N ++ S   L HAV +VGY  + 
Sbjct: 258 --DAETELLTLLVTHGPVAVAVNAISWQNYLGGIIQYNCDS-SFNSLNHAVQIVGYDTEA 314

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
            IP+++++NSWGP   ++G+  I  G N CGI
Sbjct: 315 RIPHYIIKNSWGPSFGNKGYIYIAVGKNLCGI 346



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 31/46 (67%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            L HAV +VGY  +  IP+++++NSWGP   ++G+  I  G N CGI
Sbjct: 301  LNHAVQIVGYDTEARIPHYIIKNSWGPSFGNKGYIYIAVGKNLCGI 346


>gi|158300877|ref|XP_001689282.1| AGAP011828-PA [Anopheles gambiae str. PEST]
 gi|157013372|gb|EDO63348.1| AGAP011828-PA [Anopheles gambiae str. PEST]
          Length = 344

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 166/327 (50%), Gaps = 26/327 (7%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFS 699
           E + E + AF ++  ++Y ++ E + R + + Q+ HK  KH           R   ++++
Sbjct: 22  ELVKEEWTAFKLQHRKKYDSETEERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYA 81

Query: 700 DRSPEEIL-CKTGFKWSERTYERIV-ADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGP 756
           D   EE +    GF  S     +++  + + +E+ +  +E  +  VP A DWR K     
Sbjct: 82  DLLHEEFVHTLNGFNRSVSGKGQLLRGELKPIEEPVTWIEPANVDVPTAMDWRTKGAVTQ 141

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIE 814
             DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+++   +GC+G   + + +
Sbjct: 142 VKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSQKYGNNGCNGGMMDFAFQ 201

Query: 815 YTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYG 871
           Y     G+++EK YPY+  + E   C Y+   V   T K F+    G+E  + K L   G
Sbjct: 202 YIKDNKGIDTEKSYPYEAIDDE---CHYNPKAVGA-TDKGFVDIPQGNEKALMKALATVG 257

Query: 872 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIG 930
           P+SV +++        +     +  C    L H VL VGYG  +D   YWLV+NSWG   
Sbjct: 258 PVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGYGTTEDGEDYWLVKNSWGTTW 317

Query: 931 PDEGFFKIERG-NNACGIEQIAGYATI 956
            D+G+ K+ R  +N CGI   A Y  +
Sbjct: 318 GDQGYVKMARNRDNHCGIATTASYPLV 344



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 164/328 (50%), Gaps = 27/328 (8%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFS 333
           E + E + AF ++  ++Y ++ E + R + + Q+ HK  KH           R   ++++
Sbjct: 22  ELVKEEWTAFKLQHRKKYDSETEERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYA 81

Query: 334 DRSPEEIL-CKTGFKWSERTYERIV-ADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGP 390
           D   EE +    GF  S     +++  + + +E+ +  +E  +  VP A DWR K     
Sbjct: 82  DLLHEEFVHTLNGFNRSVSGKGQLLRGELKPIEEPVTWIEPANVDVPTAMDWRTKGAVTQ 141

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPI 448
             DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+ Q  G  GC+G  ++   
Sbjct: 142 VKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCS-QKYGNNGCNGGMMDFAF 200

Query: 449 EYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSE-TMKKILYKY 505
           +Y     G+++EK YPY   + E   C Y+   V   T K F+    G+E  + K L   
Sbjct: 201 QYIKDNKGIDTEKSYPYEAIDDE---CHYNPKAVGA-TDKGFVDIPQGNEKALMKALATV 256

Query: 506 GPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPI 564
           GP+SV +++    F   +     +  C    L H VL VGYG  +D   YWL +NSWG  
Sbjct: 257 GPVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGYGTTEDGEDYWLVKNSWGTT 316

Query: 565 GPDEGFFKIERG-NNACGIEQIAGYATI 591
             D+G+ K+ R  +N CGI   A Y  +
Sbjct: 317 WGDQGYVKMARNRDNHCGIATTASYPLV 344



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 118/222 (53%), Gaps = 11/222 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           VP A DWR K       DQ  CGSCW+FS  G LEGQ+  KTGKLV  S+  LV+C+++ 
Sbjct: 127 VPTAMDWRTKGAVTQVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSQKY 186

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + + +Y     G+++EK YPY+  + E   C Y+   V   T K F+   
Sbjct: 187 GNNGCNGGMMDFAFQYIKDNKGIDTEKSYPYEAIDDE---CHYNPKAVGA-TDKGFVDIP 242

Query: 127 NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQD 184
            G+E  + K L   GP+SV +++        +     +  C    L H VL VGYG  +D
Sbjct: 243 QGNEKALMKALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGYGTTED 302

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
              YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 303 GEDYWLVKNSWGTTWGDQGYVKMARNRDNHCGIATTASYPLV 344



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D+GF  I +GN    ++ +A    + V               V  +  C    L H VL 
Sbjct: 235  DKGFVDIPQGNEKALMKALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLA 294

Query: 977  VGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG  +D   YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 295  VGYGTTEDGEDYWLVKNSWGTTWGDQGYVKMARNRDNHCGIATTASYPLV 344


>gi|305434756|gb|ADM53740.1| cathepsin L1 precursor [Lepeophtheirus salmonis]
          Length = 325

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 125/233 (53%), Gaps = 20/233 (8%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           ++   PVP   +W K        DQ DCGSCWAFS  G +EGQY IK  KL+ FS+ QLV
Sbjct: 101 LDNSAPVPSYVNWTKNGAVTAVKDQKDCGSCWAFSTTGSVEGQYFIKNKKLLSFSEQQLV 160

Query: 65  ECAK--QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFT 119
           +C+   +  GC+G + + + +Y     G+ +E  YPY   +G    C Y+K+    ++ +
Sbjct: 161 DCSSDFRNEGCNGGWMDNAFKYLIANKGIATEDTYPYTATDG---VCVYNKTMAAGRISS 217

Query: 120 GKDFLHFNGSE-TMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAV 175
            KD  H  GSE  +K  + + GP+SV +++   D      G  +   DE CS   L H V
Sbjct: 218 FKDVKH--GSEDQLKLAVAQIGPISVAIDASSGDFQFYKKGVYV---DEECSSKYLDHGV 272

Query: 176 LLVGYG--KQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           L VGYG  K   + YWLV+NSW     D+G+ K+ R + N CGI  +A Y  I
Sbjct: 273 LAVGYGTDKGTGLDYWLVKNSWSASWGDQGYIKMARNHKNMCGIASLASYPVI 325



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 124/233 (53%), Gaps = 20/233 (8%)

Query: 736 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 795
           ++   PVP   +W K        DQ  CGSCWAFS  G +EGQY IK  KL+ FS+ QLV
Sbjct: 101 LDNSAPVPSYVNWTKNGAVTAVKDQKDCGSCWAFSTTGSVEGQYFIKNKKLLSFSEQQLV 160

Query: 796 ECAK--QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFT 850
           +C+   +  GC+G + + + +Y     G+ +E  YPY   +G    C Y+K+    ++ +
Sbjct: 161 DCSSDFRNEGCNGGWMDNAFKYLIANKGIATEDTYPYTATDG---VCVYNKTMAAGRISS 217

Query: 851 GKDFLHFNGSE-TMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAV 906
            KD  H  GSE  +K  + + GP+SV +++   D      G  +   DE CS   L H V
Sbjct: 218 FKDVKH--GSEDQLKLAVAQIGPISVAIDASSGDFQFYKKGVYV---DEECSSKYLDHGV 272

Query: 907 LLVGYG--KQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           L VGYG  K   + YWLV+NSW     D+G+ K+ R + N CGI  +A Y  I
Sbjct: 273 LAVGYGTDKGTGLDYWLVKNSWSASWGDQGYIKMARNHKNMCGIASLASYPVI 325



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 15/231 (6%)

Query: 370 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 429
           ++   PVP   +W K        DQ  CGSCWAFS  G +EGQY IK  KL+ FS+ QLV
Sbjct: 101 LDNSAPVPSYVNWTKNGAVTAVKDQKDCGSCWAFSTTGSVEGQYFIKNKKLLSFSEQQLV 160

Query: 430 ECAKQCSGCGGCDG--LEQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKV--KLF 484
           +C+       GC+G  ++   +Y     G+ +E  YPY   +G    C Y+K+    ++ 
Sbjct: 161 DCSSDFRN-EGCNGGWMDNAFKYLIANKGIATEDTYPYTATDG---VCVYNKTMAAGRIS 216

Query: 485 TGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLL 543
           + KD  +  GSE  +K  + + GP+SV +++    F         DE CS   L H VL 
Sbjct: 217 SFKDVKH--GSEDQLKLAVAQIGPISVAIDASSGDFQFYKKGVYVDEECSSKYLDHGVLA 274

Query: 544 VGYG--KQDDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           VGYG  K   + YWL +NSW     D+G+ K+ R + N CGI  +A Y  I
Sbjct: 275 VGYGTDKGTGLDYWLVKNSWSASWGDQGYIKMARNHKNMCGIASLASYPVI 325



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 962  DETCSPYDLGHAVLLVGYG--KQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQI 1018
            DE CS   L H VL VGYG  K   + YWLV+NSW     D+G+ K+ R + N CGI  +
Sbjct: 260  DEECSSKYLDHGVLAVGYGTDKGTGLDYWLVKNSWSASWGDQGYIKMARNHKNMCGIASL 319

Query: 1019 AGYATI 1024
            A Y  I
Sbjct: 320  ASYPVI 325


>gi|2914594|pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent
           Vinyl Sulfone Inhibitor
 gi|28374044|pdb|1NL6|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374045|pdb|1NL6|B Chain B, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374047|pdb|1NLJ|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374048|pdb|1NLJ|B Chain B, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|47168617|pdb|1Q6K|A Chain A, Cathepsin K Complexed With T-butyl(1s)-1-cyclohexyl-2-
           Oxoethylcarbamate
 gi|55670045|pdb|1TU6|A Chain A, Cathepsin K Complexed With A Ketoamide Inhibitor
 gi|55670046|pdb|1TU6|B Chain B, Cathepsin K Complexed With A Ketoamide Inhibitor
 gi|62738654|pdb|1YK7|A Chain A, Cathepsin K Complexed With A Cyanopyrrolidine Inhibitor
 gi|73535690|pdb|1YK8|A Chain A, Cathepsin K Complexed With A Cyanamide-Based Inhibitor
 gi|73535721|pdb|1YT7|A Chain A, Cathepsin K Complexed With A Constrained Ketoamide
           Inhibitor
 gi|93278849|pdb|2BDL|A Chain A, Cathepsin K Complexed With A Pyrrolidine Ketoamide-Based
           Inhibitor
 gi|114793438|pdb|2ATO|A Chain A, Crystal Structure Of Human Cathepsin K In Complex With
           Myocrisin
 gi|114793448|pdb|2AUX|A Chain A, Cathepsin K Complexed With A Semicarbazone Inhibitor
 gi|114793451|pdb|2AUZ|A Chain A, Cathepsin K Complexed With A Semicarbazone Inhibitor
 gi|126030469|pdb|2FTD|A Chain A, Crystal Structure Of Cathepsin K Complexed With 7-Methyl-
           Substituted Azepan-3-One Compound
 gi|126030470|pdb|2FTD|B Chain B, Crystal Structure Of Cathepsin K Complexed With 7-Methyl-
           Substituted Azepan-3-One Compound
 gi|157830076|pdb|1ATK|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor E-64
 gi|157830085|pdb|1AU0|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Symmetric Diacylaminomethyl
           Ketone Inhibitor
 gi|157830086|pdb|1AU2|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Propanone Inhibitor
 gi|157830087|pdb|1AU3|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Pyrrolidinone Inhibitor
 gi|157830088|pdb|1AU4|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Pyrrolidinone Inhibitor
 gi|157830146|pdb|1AYU|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Symmetric Biscarbohydrazide
           Inhibitor
 gi|157830147|pdb|1AYV|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Thiazolhydrazide Inhibitor
 gi|157830148|pdb|1AYW|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent
           Benzyloxybenzoylcarbohydrazide Inhibitor
 gi|157830300|pdb|1BGO|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Peptidomimetic Inhibitor
 gi|197305045|pdb|3C9E|A Chain A, Crystal Structure Of The Cathepsin K : Chondroitin Sulfate
           Complex.
 gi|290560385|pdb|3KW9|A Chain A, X-Ray Structure Of Cathepsin K Covalently Bound To A
           Triazine Ligand
 gi|290560386|pdb|3KWZ|A Chain A, Cathepsin K In Complex With A Non-Selective 2-Cyano-
           Pyrimidine Inhibitor
 gi|290560387|pdb|3KX1|A Chain A, Cathepsin K In Complex With A Selective 2-Cyano-Pyrimidine
           Inhibitor
 gi|293651910|pdb|3KWB|X Chain X, Structure Of Catk Covalently Bound To A Dioxo-Triazine
           Inhibitor
 gi|293651911|pdb|3KWB|Y Chain Y, Structure Of Catk Covalently Bound To A Dioxo-Triazine
           Inhibitor
 gi|308198615|pdb|3O1G|A Chain A, Cathepsin K Covalently Bound To A 2-Cyano Pyrimidine
           Inhibitor With A Benzyl P3 Group.
 gi|327200584|pdb|3O0U|A Chain A, Cathepsin K Covalently Bound To A Cyano-Pyrimidine
           Inhibitor With Improved Selectivity Over Herg
 gi|394986262|pdb|4DMX|A Chain A, Cathepsin K Inhibitor
 gi|394986263|pdb|4DMY|A Chain A, Cathepsin K Inhibitor
 gi|394986264|pdb|4DMY|B Chain B, Cathepsin K Inhibitor
          Length = 215

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 119/218 (54%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  + 
Sbjct: 1   APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 60

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 128
            GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +    
Sbjct: 61  DGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGN 117

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +
Sbjct: 118 EKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKH 177

Query: 189 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 178 WIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 119/218 (54%), Gaps = 6/218 (2%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  + 
Sbjct: 1   APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 60

Query: 802 SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 859
            GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +    
Sbjct: 61  DGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGN 117

Query: 860 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 919
            + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +
Sbjct: 118 EKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKH 177

Query: 920 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 178 WIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/219 (36%), Positives = 119/219 (54%), Gaps = 7/219 (3%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  + 
Sbjct: 1   APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 60

Query: 436 SGCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFN 493
            GCGG   +    +Y  +  G++SE  YPY    G++  C Y+ + K     G   +   
Sbjct: 61  DGCGG-GYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEG 116

Query: 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIP 553
             + +K+ + + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    
Sbjct: 117 NEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNK 176

Query: 554 YWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           +W+ +NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 177 HWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 152  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 211

Query: 1021 YATI 1024
            +  +
Sbjct: 212  FPKM 215


>gi|330792958|ref|XP_003284553.1| hypothetical protein DICPUDRAFT_96752 [Dictyostelium purpureum]
 gi|325085467|gb|EGC38873.1| hypothetical protein DICPUDRAFT_96752 [Dictyostelium purpureum]
          Length = 346

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 149/333 (44%), Gaps = 44/333 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDG------------HKKHERYGTSEFSDRSPEE 339
           F AF  K  + Y+++E    +FE FK +             HK   ++G +EF+D S  E
Sbjct: 29  FVAFQQKYNKVYSSNE-YSAKFETFKANLGVIAQLNQKAKLHKSDTKFGVNEFADLSAAE 87

Query: 340 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
                 F+      +    D       L+  E    +P A+DWR K       +Q  CGS
Sbjct: 88  ------FRKYYLNAQVAKPDASLPMAPLLTEEVLETIPTAFDWRTKGAVTGVKNQGQCGS 141

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-------SGCGGCDGLEQPIEYTH 452
           CW+FS  G +EGQ+ +    LV  S+  LV+C  QC       S   GCDG  QP  Y +
Sbjct: 142 CWSFSTTGNIEGQWYLAGNTLVGLSEQNLVDCDHQCMEYDGQKSCDAGCDGGLQPNAYRY 201

Query: 453 ---QAGLESEKDYPYRNGNGE--KFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGP 507
                GL+SE  YPY    G+  KFK     +K+  FT    +       M   L  +GP
Sbjct: 202 VIENGGLDSENSYPYLAVTGDSCKFKSGNVAAKISNFT----MIPQNETQMAGYLATHGP 257

Query: 508 LSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI-----PYWLARNSWG 562
           L++  ++    FY G      D  C    L H +L+VG+  + +I     PYW+ +NSWG
Sbjct: 258 LAIAADAAEWQFYIGGVF---DLPCGQ-SLDHGILIVGFSAEKNIFGHLKPYWIVKNSWG 313

Query: 563 PIGPDEGFFKIERGNNACGIEQIAGYATIDVVI 595
               ++G+  + +G N CG+      +TI+  +
Sbjct: 314 ASWGEQGYLYLGKGKNLCGVSDFVSTSTINASL 346



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 146/331 (44%), Gaps = 45/331 (13%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDG------------HKKHERYGTSEFSDRSPEE 705
           F AF  K  + Y+++E    +FE FK +             HK   ++G +EF+D S  E
Sbjct: 29  FVAFQQKYNKVYSSNE-YSAKFETFKANLGVIAQLNQKAKLHKSDTKFGVNEFADLSAAE 87

Query: 706 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
                 F+      +    D       L+  E    +P A+DWR K       +Q  CGS
Sbjct: 88  ------FRKYYLNAQVAKPDASLPMAPLLTEEVLETIPTAFDWRTKGAVTGVKNQGQCGS 141

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC----------SGCDGCFFEPSIEY 815
           CW+FS  G +EGQ+ +    LV  S+  LV+C  QC          +GCDG     +  Y
Sbjct: 142 CWSFSTTGNIEGQWYLAGNTLVGLSEQNLVDCDHQCMEYDGQKSCDAGCDGGLQPNAYRY 201

Query: 816 T-HQAGLESEKDYPYKNANGE--KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGP 872
                GL+SE  YPY    G+  KFK     +K+  FT    +       M   L  +GP
Sbjct: 202 VIENGGLDSENSYPYLAVTGDSCKFKSGNVAAKISNFT----MIPQNETQMAGYLATHGP 257

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI-----PYWLVRNSWG 927
           L++  ++     Y G      D  C    L H +L+VG+  + NI     PYW+V+NSWG
Sbjct: 258 LAIAADAAEWQFYIGGVF---DLPCGQ-SLDHGILIVGFSAEKNIFGHLKPYWIVKNSWG 313

Query: 928 PIGPDEGFFKIERGNNACGIEQIAGYATIDV 958
               ++G+  + +G N CG+      +TI+ 
Sbjct: 314 ASWGEQGYLYLGKGKNLCGVSDFVSTSTINA 344



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 115/246 (46%), Gaps = 26/246 (10%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           L+  E    +P A+DWR K       +Q  CGSCW+FS  G +EGQ+ +    LV  S+ 
Sbjct: 109 LLTEEVLETIPTAFDWRTKGAVTGVKNQGQCGSCWSFSTTGNIEGQWYLAGNTLVGLSEQ 168

Query: 62  QLVECAKQC----------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE--KFKC 108
            LV+C  QC          +GCDG     +  Y     GL+SE  YPY    G+  KFK 
Sbjct: 169 NLVDCDHQCMEYDGQKSCDAGCDGGLQPNAYRYVIENGGLDSENSYPYLAVTGDSCKFKS 228

Query: 109 AYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSP 168
               +K+  FT    +       M   L  +GPL++  ++     Y G      D  C  
Sbjct: 229 GNVAAKISNFT----MIPQNETQMAGYLATHGPLAIAADAAEWQFYIGGVF---DLPCGQ 281

Query: 169 YDLGHAVLLVGYGKQDNI-----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 223
             L H +L+VG+  + NI     PYW+V+NSWG    ++G+  + +G N CG+      +
Sbjct: 282 -SLDHGILIVGFSAEKNIFGHLKPYWIVKNSWGASWGEQGYLYLGKGKNLCGVSDFVSTS 340

Query: 224 TIDVVI 229
           TI+  +
Sbjct: 341 TINASL 346



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)

Query: 969  DLGHAVLLVGYGKQDDI-----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
             L H +L+VG+  + +I     PYW+V+NSWG    ++G+  + +G N CG+      +T
Sbjct: 282  SLDHGILIVGFSAEKNIFGHLKPYWIVKNSWGASWGEQGYLYLGKGKNLCGVSDFVSTST 341

Query: 1024 IDV 1026
            I+ 
Sbjct: 342  INA 344


>gi|33348834|gb|AAQ16117.1| cathepsin L-like cysteine proteinase A [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 332

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 10/224 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPSTVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKDGELVSLSEQNLVDCS 172

Query: 68  KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +    +GC+G   + + +Y     G+++E+ YPY+  +    KC + K  V   T   F+
Sbjct: 173 QSFGNNGCEGGLMDNAFKYIKANDGIDAEESYPYEAMDD---KCRFKKEDVGA-TDTGFV 228

Query: 125 HFNGS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
              G   + +KK +   GP+SV +++        +    ++  CS  +L H VL VGYG 
Sbjct: 229 DIEGGSEDDLKKAVATVGPISVAIDAGHSSFQLYSEGVYDEPECSSEELDHGVLAVGYGV 288

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           +D   YWLV+NSWG    D G+  + R  NN CGI   A Y  +
Sbjct: 289 KDGKKYWLVKNSWGGSWGDNGYILMSRDKNNQCGIASAASYPLV 332



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 10/224 (4%)

Query: 739 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 798
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPSTVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKDGELVSLSEQNLVDCS 172

Query: 799 KQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 855
           +    +GC+G   + + +Y     G+++E+ YPY+  +    KC + K  V   T   F+
Sbjct: 173 QSFGNNGCEGGLMDNAFKYIKANDGIDAEESYPYEAMDD---KCRFKKEDVGA-TDTGFV 228

Query: 856 HFNGS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 913
              G   + +KK +   GP+SV +++        +    ++  CS  +L H VL VGYG 
Sbjct: 229 DIEGGSEDDLKKAVATVGPISVAIDAGHSSFQLYSEGVYDEPECSSEELDHGVLAVGYGV 288

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +D   YWLV+NSWG    D G+  + R  NN CGI   A Y  +
Sbjct: 289 KDGKKYWLVKNSWGGSWGDNGYILMSRDKNNQCGIASAASYPLV 332



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 118/225 (52%), Gaps = 11/225 (4%)

Query: 373 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 432
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +K G+LV  S+  LV+C+
Sbjct: 113 DSSLPSTVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKDGELVSLSEQNLVDCS 172

Query: 433 KQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF 489
            Q  G  GC+G  ++   +Y     G+++E+ YPY   +    KC + K  V   T   F
Sbjct: 173 -QSFGNNGCEGGLMDNAFKYIKANDGIDAEESYPYEAMDD---KCRFKKEDVGA-TDTGF 227

Query: 490 LYFNGS--ETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG 547
           +   G   + +KK +   GP+SV +++    F   +    ++  CS  +L H VL VGYG
Sbjct: 228 VDIEGGSEDDLKKAVATVGPISVAIDAGHSSFQLYSEGVYDEPECSSEELDHGVLAVGYG 287

Query: 548 KQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
            +D   YWL +NSWG    D G+  + R  NN CGI   A Y  +
Sbjct: 288 VKDGKKYWLVKNSWGGSWGDNGYILMSRDKNNQCGIASAASYPLV 332



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 16/109 (14%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  IE G+     + +A    I V               V ++  CS  +L H VL 
Sbjct: 224  DTGFVDIEGGSEDDLKKAVATVGPISVAIDAGHSSFQLYSEGVYDEPECSSEELDHGVLA 283

Query: 977  VGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG +D   YWLV+NSWG    D G+  + R  NN CGI   A Y  +
Sbjct: 284  VGYGVKDGKKYWLVKNSWGGSWGDNGYILMSRDKNNQCGIASAASYPLV 332


>gi|50513589|pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized
           Norleucine Aldehyde
          Length = 214

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 119/217 (54%), Gaps = 6/217 (2%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  
Sbjct: 1   PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 60

Query: 72  GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGS 129
           GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     
Sbjct: 61  GCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNE 117

Query: 130 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 189
           + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W
Sbjct: 118 KALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHW 177

Query: 190 LVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           +++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 178 IIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 214



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 119/217 (54%), Gaps = 6/217 (2%)

Query: 743 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 802
           PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  
Sbjct: 1   PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 60

Query: 803 GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGS 860
           GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     G   +     
Sbjct: 61  GCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGNE 117

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 920
           + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VGYG Q    +W
Sbjct: 118 KALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHW 177

Query: 921 LVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 178 IIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 214



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/218 (36%), Positives = 119/218 (54%), Gaps = 7/218 (3%)

Query: 377 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 436
           PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   KTGKL+  S   LV+C  +  
Sbjct: 1   PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 60

Query: 437 GCGGCDGLEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNG 494
           GCGG   +    +Y  +  G++SE  YPY    G++  C Y+ + K     G   +    
Sbjct: 61  GCGG-GYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCRGYREIPEGN 116

Query: 495 SETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPY 554
            + +K+ + + GP+SV +++ L  F   +     DE+C+  +L HAVL VGYG Q    +
Sbjct: 117 EKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKH 176

Query: 555 WLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           W+ +NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 177 WIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 214



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 151  DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 210

Query: 1021 YATI 1024
            +  +
Sbjct: 211  FPKM 214


>gi|2582045|gb|AAB82449.1| lymphopain [Homo sapiens]
 gi|2582181|gb|AAB82457.1| lymphopain [Homo sapiens]
 gi|3033547|gb|AAC32181.1| cathepsin W [Homo sapiens]
          Length = 376

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 156/346 (45%), Gaps = 43/346 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  + I     V+ S  +L++C +   GC G F ++  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVHELLDCGRCGDGCHGGFVWDAFITVLNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIH 883
           KDYP++       +C + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQ 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN--------------------IPYWLVR 923
            Y    I+    TC P  + H+VLLVG+G   +                     PYW+++
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILK 330

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV--VKNDETCSP 967
           NSWG    ++G+F++ RG+N CGI +    A +    +K   +C P
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARVQKPDMKPRVSCPP 376



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 148/333 (44%), Gaps = 40/333 (12%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  + I     V+ S  +L++C +   GC G    +  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVHELLDCGRCGDGCHGGFVWDAFITVLNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSETMKKILYKYGPLSVGLNSHLIH 518
           KDYP++ G     +C + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQ 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDDIPYWLAR 558
            Y    I+    TC P  + H+VLLVG+G                         PYW+ +
Sbjct: 271 LYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILK 330

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 25/243 (10%)

Query: 6   EKDGPVPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           E +  VP + DWRK      P  DQ +C  CWA + AG +E  + I     V+ S  +L+
Sbjct: 123 EPEESVPFSCDWRKVAGAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVHELL 182

Query: 65  ECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C +   GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF
Sbjct: 183 DCGRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDF 240

Query: 124 LHF-NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +   N    + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G 
Sbjct: 241 IMLQNNEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGS 300

Query: 183 QDN--------------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
             +                     PYW+++NSWG    ++G+F++ RG+N CGI +    
Sbjct: 301 VKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360

Query: 223 ATI 225
           A +
Sbjct: 361 ARV 363



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 20/81 (24%)

Query: 964  TCSPYDLGHAVLLVGYGK--------------------QDDIPYWLVRNSWGPIGPDEGF 1003
            TC P  + H+VLLVG+G                         PYW+++NSWG    ++G+
Sbjct: 283  TCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGY 342

Query: 1004 FKIERGNNACGIEQIAGYATI 1024
            F++ RG+N CGI +    A +
Sbjct: 343  FRLHRGSNTCGITKFPLTARV 363


>gi|403223173|dbj|BAM41304.1| cysteine protease precursor TacP [Theileria orientalis strain
           Shintoku]
          Length = 463

 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 168/359 (46%), Gaps = 43/359 (11%)

Query: 622 CLPSLTDRITDQVVARVDTLAIEGSLTFDNEN---ILETFKAFIVKRGRQYANDEEIKER 678
             PS+ +++T+  V  + +L     +++D+      L +F+ F     + +A D+E +ER
Sbjct: 106 SFPSIDEKLTEAYVKELSSLYERREISYDHVKEFEALRSFEKFKADYNKVHATDDERRER 165

Query: 679 FEYFKQD-----GHKKHERYGTSE--FSDRSPEE-------ILCKTGFKWSERTYERIVA 724
           F  F+ +      HK HE +  S   FSD + EE       I        SE   ER+++
Sbjct: 166 FLVFRNNYLETLTHKGHETFTKSVNFFSDLTEEELNRLFPKIEVPKESSPSEH-LERLMS 224

Query: 725 DREKVEKMLMEV-----------EKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 773
            R      L ++             DG   ++ DWRK N      DQ  CGSCWAF+  G
Sbjct: 225 SRSTDPNFLAKLALAKGFQSPVKSLDGISGESIDWRKANGVTKVKDQGMCGSCWAFASVG 284

Query: 774 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNAN 833
            +E  Y I T K+++ S+ +LV C  +  GC+G F + ++EY    G+ S  D PY   +
Sbjct: 285 SVESLYKIHTDKVLDLSEQELVNCETKSHGCEGGFGDTALEYVKNKGISSSADVPYHAMD 344

Query: 834 GEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 893
               +    K+  K+F    F+   G + M K L     +  +  S  +  Y        
Sbjct: 345 ----QTCDIKTHDKVFIN-SFMVTKGKDVMNKSLVLSPTVVYIAASSELMMYKAGVF--- 396

Query: 894 DETCSPYDLGHAVLLVGYGKQDNI--PYWLVRNSWGPIGPDEGFFKIER---GNNACGI 947
           +  C+  +L HAVLLVG G  D +   YW+++NSWGP   ++G+ ++ER   G + CG+
Sbjct: 397 NGACAK-ELNHAVLLVGEGYDDIVGKRYWVIKNSWGPHWGEDGYVRLERTDKGTDKCGV 454



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 169/361 (46%), Gaps = 46/361 (12%)

Query: 256 CLPSLTDRITDQVVARVDTLAIEGSLTFDNEN---ILETFKAFIVKRGRQYANDEEIKER 312
             PS+ +++T+  V  + +L     +++D+      L +F+ F     + +A D+E +ER
Sbjct: 106 SFPSIDEKLTEAYVKELSSLYERREISYDHVKEFEALRSFEKFKADYNKVHATDDERRER 165

Query: 313 FEYFKQD-----GHKKHERYGTSE--FSDRSPEE-------ILCKTGFKWSERTYERIVA 358
           F  F+ +      HK HE +  S   FSD + EE       I        SE   ER+++
Sbjct: 166 FLVFRNNYLETLTHKGHETFTKSVNFFSDLTEEELNRLFPKIEVPKESSPSEH-LERLMS 224

Query: 359 DREKVEKMLMEV-----------EKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 407
            R      L ++             DG   ++ DWRK N      DQ  CGSCWAF+  G
Sbjct: 225 SRSTDPNFLAKLALAKGFQSPVKSLDGISGESIDWRKANGVTKVKDQGMCGSCWAFASVG 284

Query: 408 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESEKDYPYRNG 467
            +E  Y I T K+++ S+ +LV C  +  GC G  G +  +EY    G+ S  D PY   
Sbjct: 285 SVESLYKIHTDKVLDLSEQELVNCETKSHGCEGGFG-DTALEYVKNKGISSSADVPYHAM 343

Query: 468 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKK-ILYKYGPLSVGLNSHLIHFYNGTPIR 526
           +    +    K+  K+F    F+   G + M K ++     + +  +S L+ +  G    
Sbjct: 344 D----QTCDIKTHDKVFIN-SFMVTKGKDVMNKSLVLSPTVVYIAASSELMMYKAGVF-- 396

Query: 527 KNDETCSPYDLGHAVLLVGYGKQDDI--PYWLARNSWGPIGPDEGFFKIER---GNNACG 581
             +  C+  +L HAVLLVG G  D +   YW+ +NSWGP   ++G+ ++ER   G + CG
Sbjct: 397 --NGACAK-ELNHAVLLVGEGYDDIVGKRYWVIKNSWGPHWGEDGYVRLERTDKGTDKCG 453

Query: 582 I 582
           +
Sbjct: 454 V 454



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 14/214 (6%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           DG   ++ DWRK N      DQ  CGSCWAF+  G +E  Y I T K+++ S+ +LV C 
Sbjct: 250 DGISGESIDWRKANGVTKVKDQGMCGSCWAFASVGSVESLYKIHTDKVLDLSEQELVNCE 309

Query: 68  KQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
            +  GC+G F + ++EY    G+ S  D PY   +    +    K+  K+F    F+   
Sbjct: 310 TKSHGCEGGFGDTALEYVKNKGISSSADVPYHAMD----QTCDIKTHDKVFIN-SFMVTK 364

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI- 186
           G + M K L     +  +  S  +  Y        +  C+  +L HAVLLVG G  D + 
Sbjct: 365 GKDVMNKSLVLSPTVVYIAASSELMMYKAGVF---NGACAK-ELNHAVLLVGEGYDDIVG 420

Query: 187 -PYWLVRNSWGPIGPDEGFFKIER---GNNACGI 216
             YW+++NSWGP   ++G+ ++ER   G + CG+
Sbjct: 421 KRYWVIKNSWGPHWGEDGYVRLERTDKGTDKCGV 454



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 5/52 (9%)

Query: 969  DLGHAVLLVGYGKQDDI--PYWLVRNSWGPIGPDEGFFKIER---GNNACGI 1015
            +L HAVLLVG G  D +   YW+++NSWGP   ++G+ ++ER   G + CG+
Sbjct: 403  ELNHAVLLVGEGYDDIVGKRYWVIKNSWGPHWGEDGYVRLERTDKGTDKCGV 454


>gi|449461649|ref|XP_004148554.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD19a-like
           [Cucumis sativus]
          Length = 381

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 151/322 (46%), Gaps = 50/322 (15%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY------GTSEFSDRSPEEILCK 709
           F  F  + G+ YA +EE   RF+ FK +  +  +H+ +      G ++FSD +P E   +
Sbjct: 59  FSLFKRRFGKSYATEEEHDRRFKIFKANMRRAERHQSFDPSAIHGVTQFSDLTPFEF--R 116

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
             F        R+  D      +  E      +P  +DWR+        +Q +CGSCW+F
Sbjct: 117 KAFLGLRGHRLRLPVDTNAAPILPTE-----NLPIDFDWRQHGGVTRVKNQGSCGSCWSF 171

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG 820
           S  G LEG         +  S+ QLV+C  +C         SGC+G     + EYT +AG
Sbjct: 172 STTGALEG------ANFLXLSEQQLVDCDHECDPEEEDACDSGCNGGLMNSAFEYTLKAG 225

Query: 821 -LESEKDYPYKNANGEKFKCAYDKSKVKLFTGK-DFLHFNGSETMKKILYKYGPLSVLLN 878
            L  E+DYPY  A  ++  C +DKSK+         ++    + +   L K GPL++ +N
Sbjct: 226 GLMKEQDYPY--AGIDRNTCNFDKSKIAASIASFSVVNSIDEDQIAANLVKNGPLAIAIN 283

Query: 879 SDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNIP-------YWLVRNSWGP 928
           +  +  Y G    P       CS   L H VLLVGYG     P       YW+++NSWG 
Sbjct: 284 AVFMQTYIGGVSCPF-----ICSKR-LDHGVLLVGYGSAGYAPIRMRDKDYWIIKNSWGE 337

Query: 929 IGPDEGFFKIERGNNACGIEQI 950
              + G++KI RG N CG++ +
Sbjct: 338 SWGENGYYKICRGRNICGVDSL 359



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 150/323 (46%), Gaps = 51/323 (15%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY------GTSEFSDRSPEEILCK 343
           F  F  + G+ YA +EE   RF+ FK +  +  +H+ +      G ++FSD +P E   +
Sbjct: 59  FSLFKRRFGKSYATEEEHDRRFKIFKANMRRAERHQSFDPSAIHGVTQFSDLTPFEF--R 116

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
             F        R+  D      +  E      +P  +DWR+        +Q +CGSCW+F
Sbjct: 117 KAFLGLRGHRLRLPVDTNAAPILPTE-----NLPIDFDWRQHGGVTRVKNQGSCGSCWSF 171

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-----GC-GGCDG--LEQPIEYTHQAG 455
           S  G LEG         +  S+ QLV+C  +C       C  GC+G  +    EYT +AG
Sbjct: 172 STTGALEG------ANFLXLSEQQLVDCDHECDPEEEDACDSGCNGGLMNSAFEYTLKAG 225

Query: 456 -LESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG--SETMKKILYKYGPLSVGL 512
            L  E+DYPY     ++  C +DKSK+       F   N    + +   L K GPL++ +
Sbjct: 226 GLMKEQDYPY--AGIDRNTCNFDKSKIAASIAS-FSVVNSIDEDQIAANLVKNGPLAIAI 282

Query: 513 NSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLARNSWG 562
           N+  +  Y G    P       CS   L H VLLVGYG       +  D  YW+ +NSWG
Sbjct: 283 NAVFMQTYIGGVSCPF-----ICSKR-LDHGVLLVGYGSAGYAPIRMRDKDYWIIKNSWG 336

Query: 563 PIGPDEGFFKIERGNNACGIEQI 585
               + G++KI RG N CG++ +
Sbjct: 337 ESWGENGYYKICRGRNICGVDSL 359



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 113/230 (49%), Gaps = 35/230 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR+        +Q  CGSCW+FS  G LEG         +  S+ QLV+C  +C
Sbjct: 144 LPIDFDWRQHGGVTRVKNQGSCGSCWSFSTTGALEG------ANFLXLSEQQLVDCDHEC 197

Query: 71  ---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     + EYT +AG L  E+DYPY  A  ++  C +DKSK+     
Sbjct: 198 DPEEEDACDSGCNGGLMNSAFEYTLKAGGLMKEQDYPY--AGIDRNTCNFDKSKIAASIA 255

Query: 121 K-DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 176
               ++    + +   L K GPL++ +N+  +  Y G    P       CS   L H VL
Sbjct: 256 SFSVVNSIDEDQIAANLVKNGPLAIAINAVFMQTYIGGVSCPF-----ICSKR-LDHGVL 309

Query: 177 LVGYGKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           LVGYG     P       YW+++NSWG    + G++KI RG N CG++ +
Sbjct: 310 LVGYGSAGYAPIRMRDKDYWIIKNSWGESWGENGYYKICRGRNICGVDSL 359


>gi|163310848|pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola
           Hepatica
          Length = 310

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 113/216 (52%), Gaps = 12/216 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGS WAFS  G +EGQY       + FS+ QLV+C++  
Sbjct: 92  VPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPW 151

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG   +H  
Sbjct: 152 GNNGCGGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGFYTVHSG 208

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++   GP +V ++  SD +   +G       +TCSP  + HAVL VGYG Q  
Sbjct: 209 SEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGTQGG 265

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 266 TDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 301



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 112/216 (51%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGS WAFS  G +EGQY       + FS+ QLV+C++  
Sbjct: 92  VPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPW 151

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG   +H  
Sbjct: 152 GNNGCGGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGFYTVHSG 208

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++   GP +V ++  SD +   +G       +TCSP  + HAVL VGYG Q  
Sbjct: 209 SEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGTQGG 265

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 266 TDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 301



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 115/221 (52%), Gaps = 21/221 (9%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGS WAFS  G +EGQY       + FS+ QLV+C++  
Sbjct: 92  VPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPW 151

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDK----SKVKLFTGKDF 489
            G  GC G  +E   +Y  Q GLE+E  YPY    G+   C Y+K    +KV  F    +
Sbjct: 152 -GNNGCGGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGF----Y 203

Query: 490 LYFNGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGY 546
              +GSE  +K ++   GP +V ++  S  + + +G       +TCSP  + HAVL VGY
Sbjct: 204 TVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGY 260

Query: 547 GKQDDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
           G Q    YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 261 GTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 301



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 17/102 (16%)

Query: 934  GFFKIERGN-----NACGIEQIAGYATIDV----------VKNDETCSPYDLGHAVLLVG 978
            GF+ +  G+     N  G E  A  A +DV          +   +TCSP  + HAVL VG
Sbjct: 201  GFYTVHSGSEVELKNLVGAEGPAAVA-VDVESDFMMYRSGIYQSQTCSPLRVNHAVLAVG 259

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 1019
            YG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 260  YGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 301


>gi|75812934|ref|NP_001028787.1| cathepsin S precursor [Bos taurus]
 gi|115503669|sp|P25326.2|CATS_BOVIN RecName: Full=Cathepsin S; Flags: Precursor
 gi|74353837|gb|AAI02246.1| Cathepsin S [Bos taurus]
 gi|296489535|tpg|DAA31648.1| TPA: cathepsin S precursor [Bos taurus]
          Length = 331

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 121/222 (54%), Gaps = 11/222 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +PD+ DWR+K        Q ACGSCWAFS  G LE Q  +KTGKLV  S   LV+C+   
Sbjct: 115 LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 174

Query: 436 SGCGGCDG--LEQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLY 491
            G  GC+G  + +  +Y     G++SE  YPY+  +G   KC YD K++    +    L 
Sbjct: 175 YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDG---KCQYDVKNRAATCSRYIELP 231

Query: 492 FNGSETMKKILYKYGPLSVGLN-SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
           F   E +K+ +   GP+SVG++ SH   F   T +   D +C+  ++ H VL+VGYG  D
Sbjct: 232 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYY-DPSCTQ-NVNHGVLVVGYGNLD 289

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
              YWL +NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 290 GKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSYPEI 331



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 117/221 (52%), Gaps = 10/221 (4%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
           +PD+ DWR+K        Q ACGSCWAFS  G LE Q  +KTGKLV  S   LV+C+   
Sbjct: 115 LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 174

Query: 801 --CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLH 856
               GC+G F   + +Y     G++SE  YPYK  +G   KC YD K++    +    L 
Sbjct: 175 YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDG---KCQYDVKNRAATCSRYIELP 231

Query: 857 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
           F   E +K+ +   GP+SV +++     +        D +C+  ++ H VL+VGYG  D 
Sbjct: 232 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGNLDG 290

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
             YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 291 KDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSYPEI 331



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD+ DWR+K        Q  CGSCWAFS  G LE Q  +KTGKLV  S   LV+C+   
Sbjct: 115 LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 174

Query: 70  --CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLH 125
               GC+G F   + +Y     G++SE  YPYK  +G   KC YD K++    +    L 
Sbjct: 175 YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDG---KCQYDVKNRAATCSRYIELP 231

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           F   E +K+ +   GP+SV +++     +        D +C+  ++ H VL+VGYG  D 
Sbjct: 232 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGNLDG 290

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 291 KDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSYPEI 331



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 10/104 (9%)

Query: 928  PIGPDEGFFKI--ERGNNACGIEQIAGYATIDVVKN----DETCSPYDLGHAVLLVGYGK 981
            P G +E   +    +G  + GI+  A +++  + K     D +C+  ++ H VL+VGYG 
Sbjct: 231  PFGSEEALKEAVANKGPVSVGID--ASHSSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGN 287

Query: 982  QDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
             D   YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 288  LDGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSYPEI 331


>gi|38147395|gb|AAR12010.1| cathepsin L-like proteinase [Triatoma infestans]
          Length = 328

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 149/312 (47%), Gaps = 17/312 (5%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWS 349
           E + AF  + G+ Y N  E   R   +K++  K  E     E  + S +  +   G    
Sbjct: 24  EEWLAFKAQFGKSYKNSFEELFRMNVYKENQRKIDEHNKRYENGEVSYKLKMNHFGDLMQ 83

Query: 350 ERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 407
                     R   ++   EV +   G +P   DWR+K    P  D   CGSCWAFS  G
Sbjct: 84  HEFKALNKLKRSAKQQNSGEVFRATGGKLPAKVDWRQKGAVTPVKDPGQCGSCWAFSSTG 143

Query: 408 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH-QAGLESEKDYPY 464
            L GQ  +K  KLV  S+ QLV+C+    G  GCDG  + Q  +Y     G+++E  YPY
Sbjct: 144 SLGGQLFLKNKKLVSLSEQQLVDCSGN-YGNDGCDGGIMVQAFQYIKGNGGIDTEGSYPY 202

Query: 465 RNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE----TMKKILYKYGPLSVGLNSHLIHFY 520
                E  KC Y   K K   G D  Y + ++     +K+ + + GP+SV +++  + F 
Sbjct: 203 E---AEDDKCRY---KTKSVAGTDKGYVDIAQGDENALKEAVAEIGPISVAIDAGNLSFQ 256

Query: 521 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNA 579
             +    ++  CS  +L H VL+VGYG ++   YWL +NSWGP   + G+ KI R  NN 
Sbjct: 257 FYSEGIYDEPFCSNTELDHGVLVVGYGTENGQDYWLVKNSWGPSWGENGYIKIARNHNNH 316

Query: 580 CGIEQIAGYATI 591
           CGI  +A Y  +
Sbjct: 317 CGIASMASYPIV 328



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 151/310 (48%), Gaps = 14/310 (4%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWS 715
           E + AF  + G+ Y N  E   R   +K++  K  E     E  + S +  +   G    
Sbjct: 24  EEWLAFKAQFGKSYKNSFEELFRMNVYKENQRKIDEHNKRYENGEVSYKLKMNHFGDLMQ 83

Query: 716 ERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 773
                     R   ++   EV +   G +P   DWR+K    P  D   CGSCWAFS  G
Sbjct: 84  HEFKALNKLKRSAKQQNSGEVFRATGGKLPAKVDWRQKGAVTPVKDPGQCGSCWAFSSTG 143

Query: 774 MLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYK 830
            L GQ  +K  KLV  S+ QLV+C+      GCDG     + +Y     G+++E  YPY+
Sbjct: 144 SLGGQLFLKNKKLVSLSEQQLVDCSGNYGNDGCDGGIMVQAFQYIKGNGGIDTEGSYPYE 203

Query: 831 NANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLNS-DLIHDYNG 887
               E  KC Y K+K    T K ++    G E  +K+ + + GP+SV +++ +L   +  
Sbjct: 204 ---AEDDKCRY-KTKSVAGTDKGYVDIAQGDENALKEAVAEIGPISVAIDAGNLSFQFYS 259

Query: 888 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACG 946
             I  ++  CS  +L H VL+VGYG ++   YWLV+NSWGP   + G+ KI R  NN CG
Sbjct: 260 EGIY-DEPFCSNTELDHGVLVVGYGTENGQDYWLVKNSWGPSWGENGYIKIARNHNNHCG 318

Query: 947 IEQIAGYATI 956
           I  +A Y  +
Sbjct: 319 IASMASYPIV 328



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 12/224 (5%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P   DWR+K    P  D   CGSCWAFS  G L GQ  +K  KLV  S+ QLV+C+ 
Sbjct: 110 GKLPAKVDWRQKGAVTPVKDPGQCGSCWAFSSTGSLGGQLFLKNKKLVSLSEQQLVDCSG 169

Query: 69  QCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GCDG     + +Y     G+++E  YPY+    E  KC Y K+K    T K ++ 
Sbjct: 170 NYGNDGCDGGIMVQAFQYIKGNGGIDTEGSYPYE---AEDDKCRY-KTKSVAGTDKGYVD 225

Query: 126 F-NGSET-MKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
              G E  +K+ + + GP+SV +++ +L   +    I  ++  CS  +L H VL+VGYG 
Sbjct: 226 IAQGDENALKEAVAEIGPISVAIDAGNLSFQFYSEGIY-DEPFCSNTELDHGVLVVGYGT 284

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           ++   YWLV+NSWGP   + G+ KI R  NN CGI  +A Y  +
Sbjct: 285 ENGQDYWLVKNSWGPSWGENGYIKIARNHNNHCGIASMASYPIV 328



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 16/111 (14%)

Query: 930  GPDEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAV 974
            G D+G+  I +G+     E +A    I V               + ++  CS  +L H V
Sbjct: 218  GTDKGYVDIAQGDENALKEAVAEIGPISVAIDAGNLSFQFYSEGIYDEPFCSNTELDHGV 277

Query: 975  LLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            L+VGYG ++   YWLV+NSWGP   + G+ KI R  NN CGI  +A Y  +
Sbjct: 278  LVVGYGTENGQDYWLVKNSWGPSWGENGYIKIARNHNNHCGIASMASYPIV 328


>gi|377823949|gb|AFB77219.1| cathepsin L1 [Fasciola gigantica]
          Length = 326

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 110/216 (50%), Gaps = 12/216 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
              GC G   E + EY  Q GLE+E  YPY    G+   C Y++   V   T    +H  
Sbjct: 168 GNYGCMGGLMENAYEYLKQFGLETESSYPYTAVEGQ---CRYNRQLGVAKVTDYYTVHSG 224

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++   GP +V ++  SD +    G       +TCSP  + HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGAEGPAAVAVDVESDFMMYRGGI---YQSQTCSPLGVNHAVLAVGYGTQGG 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGSSWGERGYIRMVRNRGNMCGIASLA 317



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 109/216 (50%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 802 S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
              GC G   E + EY  Q GLE+E  YPY    G+   C Y++   V   T    +H  
Sbjct: 168 GNYGCMGGLMENAYEYLKQFGLETESSYPYTAVEGQ---CRYNRQLGVAKVTDYYTVHSG 224

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++   GP +V ++  SD +    G       +TCSP  + HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGAEGPAAVAVDVESDFMMYRGGI---YQSQTCSPLGVNHAVLAVGYGTQGG 281

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGSSWGERGYIRMVRNRGNMCGIASLA 317



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 108/216 (50%), Gaps = 11/216 (5%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 436 SGCGGCDGL-EQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG 494
              G   GL E   EY  Q GLE+E  YPY    G+   C Y++          +   +G
Sbjct: 168 GNYGCMGGLMENAYEYLKQFGLETESSYPYTAVEGQ---CRYNRQLGVAKVTDYYTVHSG 224

Query: 495 SET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
           SE  +K ++   GP +V ++  S  + +  G       +TCSP  + HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGAEGPAAVAVDVESDFMMYRGGI---YQSQTCSPLGVNHAVLAVGYGTQGG 281

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
             YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGSSWGERGYIRMVRNRGNMCGIASLA 317



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            +   +TCSP  + HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  
Sbjct: 256  IYQSQTCSPLGVNHAVLAVGYGTQGGTDYWIVKNSWGSSWGERGYIRMVRNRGNMCGIAS 315

Query: 1018 IA 1019
            +A
Sbjct: 316  LA 317


>gi|31558997|gb|AAP49831.1| cathepsin L [Fasciola hepatica]
          Length = 326

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/217 (38%), Positives = 116/217 (53%), Gaps = 14/217 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG  +   +
Sbjct: 168 GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGY-YTVPS 223

Query: 128 GSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
           GSE  +K ++   GP +V ++  SD +   +G       +TCSP  + HAVL VGYG Q 
Sbjct: 224 GSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGTQG 280

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
              YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 281 GTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/217 (38%), Positives = 115/217 (52%), Gaps = 14/217 (6%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + +Y  Q GLE+E  YPY    G+   C Y+K   V   TG  +   +
Sbjct: 168 GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNKQLGVAKVTGY-YTVPS 223

Query: 859 GSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 915
           GSE  +K ++   GP +V ++  SD +   +G       +TCSP  + HAVL VGYG Q 
Sbjct: 224 GSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYGTQG 280

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
              YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 281 GTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 115/220 (52%), Gaps = 19/220 (8%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF- 492
            G  GC G  +E   +Y  Q GLE+E  YPY    G+   C Y+K   +L   K   Y+ 
Sbjct: 168 -GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ---CRYNK---QLGVAKVTGYYT 220

Query: 493 --NGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG 547
             +GSE  +K ++   GP +V ++  S  + + +G       +TCSP  + HAVL VGYG
Sbjct: 221 VPSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQSQTCSPLRVNHAVLAVGYG 277

Query: 548 KQDDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
            Q    YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 278 TQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            +   +TCSP  + HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  
Sbjct: 256  IYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIAS 315

Query: 1018 IA 1019
            +A
Sbjct: 316  LA 317


>gi|343475823|emb|CCD12886.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 145/311 (46%), Gaps = 24/311 (7%)

Query: 652 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 703
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 704 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           EE      F+ +        A   K  + ++ V    P P   DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVSTGRP-PMTVDWRKKGAVTPVKDQGKC 147

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE---YTHQAG 820
            S WAFS  G +EGQ+ I   +L   S+  LV C     GC+    +P+ +   ++++  
Sbjct: 148 DSSWAFSAIGNIEGQWKIAGHELTSLSEQMLVSCDTNDLGCELGLKDPAFQWILWSNKGN 207

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           + +E+ YPY +  G    C      V    +   +L  +  +T+ + L + GP+++ +++
Sbjct: 208 VFTEQSYPYASGGGNVPTCDMSGKVVGAKISNMRYLPLD-EDTIAEWLARKGPVAIAVDA 266

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
                Y G  +     +C    L +  LLVGY      PYW+++NSWG    +EG+ +IE
Sbjct: 267 TSFQRYTGGVL----TSCISRRLNYGALLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRIE 322

Query: 940 RGNNACGIEQI 950
           +G N C ++ +
Sbjct: 323 KGTNQCLVKNL 333



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 144/311 (46%), Gaps = 23/311 (7%)

Query: 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 337
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 338 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           EE      F+ +        A   K  + ++ V    P P   DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVSTGRP-PMTVDWRKKGAVTPVKDQGKC 147

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC--GGCDGLEQPIEYTHQAG 455
            S WAFS  G +EGQ+ I   +L   S+  LV C     GC  G  D   Q I ++++  
Sbjct: 148 DSSWAFSAIGNIEGQWKIAGHELTSLSEQMLVSCDTNDLGCELGLKDPAFQWILWSNKGN 207

Query: 456 LESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           + +E+ YPY +G G    C      V    +   +L  +  +T+ + L + GP+++ +++
Sbjct: 208 VFTEQSYPYASGGGNVPTCDMSGKVVGAKISNMRYLPLD-EDTIAEWLARKGPVAIAVDA 266

Query: 515 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
                Y G  +     +C    L +  LLVGY      PYW+ +NSWG    +EG+ +IE
Sbjct: 267 TSFQRYTGGVL----TSCISRRLNYGALLVGYDDTSKPPYWIIKNSWGKGWGEEGYIRIE 322

Query: 575 RGNNACGIEQI 585
           +G N C ++ +
Sbjct: 323 KGTNQCLVKNL 333



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 9/215 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G  P   DWRKK    P  DQ  C S WAFS  G +EGQ+ I   +L   S+  LV C  
Sbjct: 124 GRPPMTVDWRKKGAVTPVKDQGKCDSSWAFSAIGNIEGQWKIAGHELTSLSEQMLVSCDT 183

Query: 69  QCSGCDGCFFEPSIE---YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFL 124
              GC+    +P+ +   ++++  + +E+ YPY +  G    C      V    +   +L
Sbjct: 184 NDLGCELGLKDPAFQWILWSNKGNVFTEQSYPYASGGGNVPTCDMSGKVVGAKISNMRYL 243

Query: 125 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
             +  +T+ + L + GP+++ +++     Y G  +     +C    L +  LLVGY    
Sbjct: 244 PLD-EDTIAEWLARKGPVAIAVDATSFQRYTGGVL----TSCISRRLNYGALLVGYDDTS 298

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
             PYW+++NSWG    +EG+ +IE+G N C ++ +
Sbjct: 299 KPPYWIIKNSWGKGWGEEGYIRIEKGTNQCLVKNL 333


>gi|357446975|ref|XP_003593763.1| Cysteine proteinase [Medicago truncatula]
 gi|355482811|gb|AES64014.1| Cysteine proteinase [Medicago truncatula]
          Length = 350

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 162/329 (49%), Gaps = 30/329 (9%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD----------GHKKHERYGT 329
           S T    +++E  + +++K  R Y N  E+++R + FK++          G+K + + G 
Sbjct: 21  SRTLTESSVVEAHQQWMMKYERTYTNSSEMEKRKKIFKENLEYIENFNNVGNKSY-KLGL 79

Query: 330 SEFSDRSPEE-ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
           + +SD + EE I   TGFK S++  +       K+  + +    +  VP  +DWR+K V 
Sbjct: 80  NRYSDLTSEEFIASHTGFKVSDQLSD------SKMRSVAIPFNLNDDVPTNFDWREKGVV 133

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI 448
               +Q  CG CWAF+    +EG   IK G L+  S+ QLV+C +Q SGCGG D +    
Sbjct: 134 TDVKNQRQCGCCWAFTAVAAVEGIVKIKNGNLISLSEQQLVDCDRQSSGCGGGDFVLAFD 193

Query: 449 EYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPL 508
                 G+  E DYPY+  + +  +        ++         +  + ++ +L +  P+
Sbjct: 194 SIIKSRGIVKEDDYPYKANDVQTCQLGQIPGAAQINGYFKVPANDEQQLLRAVLQQ--PV 251

Query: 509 SVGLN-SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDDIPYWLARNSWGPIGP 566
           SV ++ S+  H Y G      + +C P  L HAV ++GYG  +    YWL +NSWG    
Sbjct: 252 SVAISTSYDFHHYMGGVY---EGSCGP-KLNHAVTIIGYGVSEAGKKYWLIKNSWGETWG 307

Query: 567 DEGFFKIERGNNA----CGIEQIAGYATI 591
           ++G+ K+ R ++A    C I   A Y TI
Sbjct: 308 EKGYMKVLRESSATGGQCSIAVHAAYPTI 336



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 164/329 (49%), Gaps = 31/329 (9%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD----------GHKKHERYGT 695
           S T    +++E  + +++K  R Y N  E+++R + FK++          G+K + + G 
Sbjct: 21  SRTLTESSVVEAHQQWMMKYERTYTNSSEMEKRKKIFKENLEYIENFNNVGNKSY-KLGL 79

Query: 696 SEFSDRSPEE-ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
           + +SD + EE I   TGFK S++  +       K+  + +    +  VP  +DWR+K V 
Sbjct: 80  NRYSDLTSEEFIASHTGFKVSDQLSD------SKMRSVAIPFNLNDDVPTNFDWREKGVV 133

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 814
               +Q  CG CWAF+    +EG   IK G L+  S+ QLV+C +Q SGC G  F  + +
Sbjct: 134 TDVKNQRQCGCCWAFTAVAAVEGIVKIKNGNLISLSEQQLVDCDRQSSGCGGGDFVLAFD 193

Query: 815 YTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
              ++ G+  E DYPYK  + +  +        ++         +  + ++ +L +  P+
Sbjct: 194 SIIKSRGIVKEDDYPYKANDVQTCQLGQIPGAAQINGYFKVPANDEQQLLRAVLQQ--PV 251

Query: 874 SVLLNSDL-IHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGP 931
           SV +++    H Y G      + +C P  L HAV ++GYG  +    YWL++NSWG    
Sbjct: 252 SVAISTSYDFHHYMGGVY---EGSCGP-KLNHAVTIIGYGVSEAGKKYWLIKNSWGETWG 307

Query: 932 DEGFFKIERGNNA----CGIEQIAGYATI 956
           ++G+ K+ R ++A    C I   A Y TI
Sbjct: 308 EKGYMKVLRESSATGGQCSIAVHAAYPTI 336



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 13/222 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VP  +DWR+K V     +Q  CG CWAF+    +EG   IK G L+  S+ QLV+C +Q 
Sbjct: 121 VPTNFDWREKGVVTDVKNQRQCGCCWAFTAVAAVEGIVKIKNGNLISLSEQQLVDCDRQS 180

Query: 71  SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
           SGC G  F  + +   ++ G+  E DYPYK  + +  +        ++         +  
Sbjct: 181 SGCGGGDFVLAFDSIIKSRGIVKEDDYPYKANDVQTCQLGQIPGAAQINGYFKVPANDEQ 240

Query: 130 ETMKKILYKYGPLSVLLNSDL-IHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIP 187
           + ++ +L +  P+SV +++    H Y G      + +C P  L HAV ++GYG  +    
Sbjct: 241 QLLRAVLQQ--PVSVAISTSYDFHHYMGGVY---EGSCGP-KLNHAVTIIGYGVSEAGKK 294

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYATI 225
           YWL++NSWG    ++G+ K+ R ++A    C I   A Y TI
Sbjct: 295 YWLIKNSWGETWGEKGYMKVLRESSATGGQCSIAVHAAYPTI 336



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 6/66 (9%)

Query: 964  TCSPYDLGHAVLLVGYG-KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQI 1018
            +C P  L HAV ++GYG  +    YWL++NSWG    ++G+ K+ R ++A    C I   
Sbjct: 272  SCGP-KLNHAVTIIGYGVSEAGKKYWLIKNSWGETWGEKGYMKVLRESSATGGQCSIAVH 330

Query: 1019 AGYATI 1024
            A Y TI
Sbjct: 331  AAYPTI 336


>gi|283046734|ref|NP_001164314.1| cathepsin L precursor [Tribolium castaneum]
 gi|270001247|gb|EEZ97694.1| cathepsin L precursor [Tribolium castaneum]
          Length = 328

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 157/338 (46%), Gaps = 34/338 (10%)

Query: 638 VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY---- 693
           V  LA+  +L      +   +  F +   +QY++  E  +R   F QD   K E +    
Sbjct: 6   VLALAVVATLAVPQSPVHAKWAEFKLTHKKQYSSPIEELKRMAIF-QDNLVKIEEHNAKF 64

Query: 694 ---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME-VEKDGPVP 743
                      ++F+D + +E +              +    +K EK+ +  V+ D P  
Sbjct: 65  AKGEVTYSKAVNQFADMTADEFMAYVN--------RGLATKPKKNEKLRLPFVQSDKPAA 116

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--C 801
              DWR   V+    +Q  CGSCW+FS  G +EGQ AI    L   S+  LV+C+     
Sbjct: 117 AEVDWRNSAVS-EVKNQGQCGSCWSFSTTGAVEGQLAISGRGLTSLSEQNLVDCSSAYGN 175

Query: 802 SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGS 860
           +GC+G + + + +Y H  G+ SE  YPY  + G    C ++ S+ V    G   L     
Sbjct: 176 AGCNGGWMDSAFDYIHDNGIMSESAYPYTASEG---SCRFNPSESVTSLQGYYDLPSGDE 232

Query: 861 ETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 919
             +K  +   GP++V L+ +D +  Y+G  +   D TCS   L H VL+VGYG +    Y
Sbjct: 233 NALKSAVANNGPIAVALDATDELQFYSGGVLY--DTTCSAQALNHGVLVVGYGSEGGQDY 290

Query: 920 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           W+V+NSWG    ++G+++  R  NN CGI   A Y  +
Sbjct: 291 WIVKNSWGSGWGEQGYWRQARNRNNNCGIATAASYPAL 328



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 154/339 (45%), Gaps = 35/339 (10%)

Query: 272 VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY---- 327
           V  LA+  +L      +   +  F +   +QY++  E  +R   F QD   K E +    
Sbjct: 6   VLALAVVATLAVPQSPVHAKWAEFKLTHKKQYSSPIEELKRMAIF-QDNLVKIEEHNAKF 64

Query: 328 ---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME-VEKDGPVP 377
                      ++F+D + +E +              +    +K EK+ +  V+ D P  
Sbjct: 65  AKGEVTYSKAVNQFADMTADEFMAYVN--------RGLATKPKKNEKLRLPFVQSDKPAA 116

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
              DWR   V+    +Q  CGSCW+FS  G +EGQ AI    L   S+  LV+C+    G
Sbjct: 117 AEVDWRNSAVS-EVKNQGQCGSCWSFSTTGAVEGQLAISGRGLTSLSEQNLVDCSS-AYG 174

Query: 438 CGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSK-VKLFTGKDFLYFNG 494
             GC+G  ++   +Y H  G+ SE  YPY    G    C ++ S+ V    G   L    
Sbjct: 175 NAGCNGGWMDSAFDYIHDNGIMSESAYPYTASEG---SCRFNPSESVTSLQGYYDLPSGD 231

Query: 495 SETMKKILYKYGPLSVGLN-SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIP 553
              +K  +   GP++V L+ +  + FY+G  +   D TCS   L H VL+VGYG +    
Sbjct: 232 ENALKSAVANNGPIAVALDATDELQFYSGGVLY--DTTCSAQALNHGVLVVGYGSEGGQD 289

Query: 554 YWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           YW+ +NSWG    ++G+++  R  NN CGI   A Y  +
Sbjct: 290 YWIVKNSWGSGWGEQGYWRQARNRNNNCGIATAASYPAL 328



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 117/226 (51%), Gaps = 11/226 (4%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           V+ D P     DWR   V+    +Q  CGSCW+FS  G +EGQ AI    L   S+  LV
Sbjct: 109 VQSDKPAAAEVDWRNSAVS-EVKNQGQCGSCWSFSTTGAVEGQLAISGRGLTSLSEQNLV 167

Query: 65  ECAKQ--CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGK 121
           +C+     +GC+G + + + +Y H  G+ SE  YPY  + G    C ++ S+ V    G 
Sbjct: 168 DCSSAYGNAGCNGGWMDSAFDYIHDNGIMSESAYPYTASEG---SCRFNPSESVTSLQGY 224

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 180
             L       +K  +   GP++V L+ +D +  Y+G  +   D TCS   L H VL+VGY
Sbjct: 225 YDLPSGDENALKSAVANNGPIAVALDATDELQFYSGGVLY--DTTCSAQALNHGVLVVGY 282

Query: 181 GKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           G +    YW+V+NSWG    ++G+++  R  NN CGI   A Y  +
Sbjct: 283 GSEGGQDYWIVKNSWGSGWGEQGYWRQARNRNNNCGIATAASYPAL 328



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            D TCS   L H VL+VGYG +    YW+V+NSWG    ++G+++  R  NN CGI   A 
Sbjct: 265  DTTCSAQALNHGVLVVGYGSEGGQDYWIVKNSWGSGWGEQGYWRQARNRNNNCGIATAAS 324

Query: 1021 YATI 1024
            Y  +
Sbjct: 325  YPAL 328


>gi|1483570|emb|CAA68066.1| cathepsin l [Litopenaeus vannamei]
          Length = 328

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 154/327 (47%), Gaps = 40/327 (12%)

Query: 653 NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYG-------TSEFSD 700
           ++ + ++ F  + GR+YA+ +E + R   F+Q     D H      G        ++F D
Sbjct: 19  SLRQQWRDFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 78

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
            + EE      F  +   +  + + R      ++  + D  +P   DWR K    P  DQ
Sbjct: 79  MTSEE------FTATMNGFLNVPSRRPTA---ILRADPDETLPKEVDWRTKGAVTPVKDQ 129

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH- 817
             CGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +    GC G   + +  Y   
Sbjct: 130 KQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCSDKFGNMGCMGGLMDQAFRYIKA 189

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVL 876
             G+++E  YPY+  +G   KC +D S V    TG   +       +KK +   GP+SV 
Sbjct: 190 NKGIDTEDSYPYEAQDG---KCRFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVA 246

Query: 877 LNSD-----LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIG 930
           +++        HD  G      +E CS   L H VL VGYG+ +    YWLV+NSW    
Sbjct: 247 IDASQPSFQFYHD--GVYY---EEGCSSTMLDHGVLAVGYGETEKGEAYWLVKNSWNTSW 301

Query: 931 PDEGFFKIERG-NNACGIEQIAGYATI 956
            ++G+ ++ R   N CGI   A Y  +
Sbjct: 302 GNKGYIQMSRDKKNNCGIASQASYPLV 328



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 152/322 (47%), Gaps = 29/322 (9%)

Query: 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYG-------TSEFSD 334
           ++ + ++ F  + GR+YA+ +E + R   F+Q     D H      G        ++F D
Sbjct: 19  SLRQQWRDFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 78

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
            + EE      F  +   +  + + R      ++  + D  +P   DWR K    P  DQ
Sbjct: 79  MTSEE------FTATMNGFLNVPSRRPTA---ILRADPDETLPKEVDWRTKGAVTPVKDQ 129

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYTH- 452
             CGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +    G   GL +Q   Y   
Sbjct: 130 KQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCSDKFGNMGCMGGLMDQAFRYIKA 189

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVG 511
             G+++E  YPY   +G   KC +D S V           +GSE+ +KK +   GP+SV 
Sbjct: 190 NKGIDTEDSYPYEAQDG---KCRFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVA 246

Query: 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEGF 570
           +++    F         +E CS   L H VL VGYG+ +    YWL +NSW     ++G+
Sbjct: 247 IDASQPSFQFYHDGVYYEEGCSSTMLDHGVLAVGYGETEKGEAYWLVKNSWNTSWGNKGY 306

Query: 571 FKIERG-NNACGIEQIAGYATI 591
            ++ R   N CGI   A Y  +
Sbjct: 307 IQMSRDKKNNCGIASQASYPLV 328



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 118/235 (50%), Gaps = 19/235 (8%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           ++  + D  +P   DWR K    P  DQ  CGSCWAFS  G LEGQ+ +K GKLV  S+ 
Sbjct: 102 ILRADPDETLPKEVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQ 161

Query: 62  QLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
            LV+C+ +    GC G   + +  Y     G+++E  YPY+  +G   KC +D S V   
Sbjct: 162 NLVDCSDKFGNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQDG---KCRFDASNVGAT 218

Query: 119 -TGKDFLHFNGSETMKKILYKYGPLSVLLNSD-----LIHDYNGTPIRKNDETCSPYDLG 172
            TG   +       +KK +   GP+SV +++        HD  G      +E CS   L 
Sbjct: 219 DTGYVDVEHGSESALKKAVATIGPISVAIDASQPSFQFYHD--GVYY---EEGCSSTMLD 273

Query: 173 HAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           H VL VGYG+ +    YWLV+NSW     ++G+ ++ R   N CGI   A Y  +
Sbjct: 274 HGVLAVGYGETEKGEAYWLVKNSWNTSWGNKGYIQMSRDKKNNCGIASQASYPLV 328



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D G+  +E G+ +   + +A    I V               V  +E CS   L H VL 
Sbjct: 219  DTGYVDVEHGSESALKKAVATIGPISVAIDASQPSFQFYHDGVYYEEGCSSTMLDHGVLA 278

Query: 977  VGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG+ +    YWLV+NSW     ++G+ ++ R   N CGI   A Y  +
Sbjct: 279  VGYGETEKGEAYWLVKNSWNTSWGNKGYIQMSRDKKNNCGIASQASYPLV 328


>gi|291224872|ref|XP_002732426.1| PREDICTED: cathepsin L2-like [Saccoglossus kowalevskii]
          Length = 691

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 114/221 (51%), Gaps = 9/221 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            PD+ DWR K       DQ ACGSCWAFS  G +EGQ    TGKLV FS+ QLV+C+   
Sbjct: 475 APDSVDWRTKGYVTEVKDQGACGSCWAFSTTGSMEGQSFKNTGKLVSFSEQQLVDCSGSY 534

Query: 436 S--GCGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSK-VKLFTGKDFLYF 492
              GCGG   ++Q   Y    G+E E DYPY     +   C+YD SK V   TG   +  
Sbjct: 535 GNMGCGG-GLMDQAFAYIEDYGIEPEADYPY---TAKDDPCSYDTSKAVATNTGYTDIAT 590

Query: 493 NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD- 551
              + +++ +   GP+SV +++    F        ++  CS   L H VL VGYG  DD 
Sbjct: 591 MDEKALQQAVATVGPISVAIDASHSSFRLYKSGVYDEPACSQTMLDHGVLAVGYGTTDDG 650

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
             YW+ +NSWG    ++G+  + R N N CGI   A Y  +
Sbjct: 651 NDYWIVKNSWGSTWGNQGYIHMSRNNDNQCGIATNASYPLM 691



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 112/220 (50%), Gaps = 8/220 (3%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
            PD+ DWR K       DQ ACGSCWAFS  G +EGQ    TGKLV FS+ QLV+C+   
Sbjct: 475 APDSVDWRTKGYVTEVKDQGACGSCWAFSTTGSMEGQSFKNTGKLVSFSEQQLVDCSGSY 534

Query: 802 S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFN 858
              GC G   + +  Y    G+E E DYPY   +     C+YD SK V   TG   +   
Sbjct: 535 GNMGCGGGLMDQAFAYIEDYGIEPEADYPYTAKDDP---CSYDTSKAVATNTGYTDIATM 591

Query: 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-I 917
             + +++ +   GP+SV +++             ++  CS   L H VL VGYG  D+  
Sbjct: 592 DEKALQQAVATVGPISVAIDASHSSFRLYKSGVYDEPACSQTMLDHGVLAVGYGTTDDGN 651

Query: 918 PYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
            YW+V+NSWG    ++G+  + R N N CGI   A Y  +
Sbjct: 652 DYWIVKNSWGSTWGNQGYIHMSRNNDNQCGIATNASYPLM 691



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 111/220 (50%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            PD+ DWR K       DQ  CGSCWAFS  G +EGQ    TGKLV FS+ QLV+C+   
Sbjct: 475 APDSVDWRTKGYVTEVKDQGACGSCWAFSTTGSMEGQSFKNTGKLVSFSEQQLVDCSGSY 534

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFN 127
              GC G   + +  Y    G+E E DYPY   +     C+YD SK V   TG   +   
Sbjct: 535 GNMGCGGGLMDQAFAYIEDYGIEPEADYPYTAKDDP---CSYDTSKAVATNTGYTDIATM 591

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-I 186
             + +++ +   GP+SV +++             ++  CS   L H VL VGYG  D+  
Sbjct: 592 DEKALQQAVATVGPISVAIDASHSSFRLYKSGVYDEPACSQTMLDHGVLAVGYGTTDDGN 651

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
            YW+V+NSWG    ++G+  + R N N CGI   A Y  +
Sbjct: 652 DYWIVKNSWGSTWGNQGYIHMSRNNDNQCGIATNASYPLM 691



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIE 1016
            V ++  CS   L H VL VGYG  DD   YW+V+NSWG    ++G+  + R N N CGI 
Sbjct: 624  VYDEPACSQTMLDHGVLAVGYGTTDDGNDYWIVKNSWGSTWGNQGYIHMSRNNDNQCGIA 683

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 684  TNASYPLM 691


>gi|346469447|gb|AEO34568.1| hypothetical protein [Amblyomma maculatum]
          Length = 333

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 154/325 (47%), Gaps = 29/325 (8%)

Query: 651 NENILET-FKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHE----------RYGTSE 697
           ++ IL T ++AF     + Y ++ E   RF+ F ++     KH           + G ++
Sbjct: 19  SQEILRTEWEAFKSTHKKTYKSNVEELLRFKIFTENSLFIAKHNVKYAKGLVSYKLGINQ 78

Query: 698 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 757
           F+D  P E +        +R     +A R         +  D  +P   DWRKK    P 
Sbjct: 79  FADLLPHEFVKMMNGYQGKR-----LAGRGSTYLPPANLN-DSSLPKTVDWRKKGAVTPV 132

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEY 815
            DQ  CGSCWAFS  G LEGQ+ +KTGKLV  S+  LV+C+      GC+G   + S  Y
Sbjct: 133 KDQGQCGSCWAFSSTGSLEGQHFLKTGKLVSLSEQNLVDCSSAYGNQGCNGGLMDNSFNY 192

Query: 816 TH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSET-MKKILYKYGP 872
                G+++E  YPY+  +G+   C Y K  V   T   F+    GSE  ++K +   GP
Sbjct: 193 IKANGGIDTEDSYPYEAEDGD---CRYKKEDVGA-TDTGFVDIKEGSEKDLQKAVATVGP 248

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++        +    ++  CS   L H VL VGYG ++   YWLV+NSW      
Sbjct: 249 VSVAIDASQQSFQLYSEGVYDEPNCSSESLDHGVLAVGYGVKNGKKYWLVKNSWAETWGQ 308

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+  + R  NN CGI   A Y  +
Sbjct: 309 DGYILMSRDKNNQCGIASSASYPLV 333



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 116/224 (51%), Gaps = 10/224 (4%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWRKK    P  DQ  CGSCWAFS  G LEGQ+ +KTGKLV  S+  LV+C+
Sbjct: 114 DSSLPKTVDWRKKGAVTPVKDQGQCGSCWAFSSTGSLEGQHFLKTGKLVSLSEQNLVDCS 173

Query: 68  KQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
                 GC+G   + S  Y     G+++E  YPY+  +G+   C Y K  V   T   F+
Sbjct: 174 SAYGNQGCNGGLMDNSFNYIKANGGIDTEDSYPYEAEDGD---CRYKKEDVGA-TDTGFV 229

Query: 125 HFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
               GSE  ++K +   GP+SV +++        +    ++  CS   L H VL VGYG 
Sbjct: 230 DIKEGSEKDLQKAVATVGPVSVAIDASQQSFQLYSEGVYDEPNCSSESLDHGVLAVGYGV 289

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           ++   YWLV+NSW      +G+  + R  NN CGI   A Y  +
Sbjct: 290 KNGKKYWLVKNSWAETWGQDGYILMSRDKNNQCGIASSASYPLV 333



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 154/326 (47%), Gaps = 30/326 (9%)

Query: 285 NENILET-FKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHE----------RYGTSE 331
           ++ IL T ++AF     + Y ++ E   RF+ F ++     KH           + G ++
Sbjct: 19  SQEILRTEWEAFKSTHKKTYKSNVEELLRFKIFTENSLFIAKHNVKYAKGLVSYKLGINQ 78

Query: 332 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 391
           F+D  P E +        +R     +A R         +  D  +P   DWRKK    P 
Sbjct: 79  FADLLPHEFVKMMNGYQGKR-----LAGRGSTYLPPANLN-DSSLPKTVDWRKKGAVTPV 132

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIE 449
            DQ  CGSCWAFS  G LEGQ+ +KTGKLV  S+  LV+C+    G  GC+G  ++    
Sbjct: 133 KDQGQCGSCWAFSSTGSLEGQHFLKTGKLVSLSEQNLVDCS-SAYGNQGCNGGLMDNSFN 191

Query: 450 YTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN-GSET-MKKILYKYG 506
           Y     G+++E  YPY   +G+   C Y K  V   T   F+    GSE  ++K +   G
Sbjct: 192 YIKANGGIDTEDSYPYEAEDGD---CRYKKEDVGA-TDTGFVDIKEGSEKDLQKAVATVG 247

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           P+SV +++    F   +    ++  CS   L H VL VGYG ++   YWL +NSW     
Sbjct: 248 PVSVAIDASQQSFQLYSEGVYDEPNCSSESLDHGVLAVGYGVKNGKKYWLVKNSWAETWG 307

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
            +G+  + R  NN CGI   A Y  +
Sbjct: 308 QDGYILMSRDKNNQCGIASSASYPLV 333



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V ++  CS   L H VL VGYG ++   YWLV+NSW      +G+  + R  NN CGI  
Sbjct: 267  VYDEPNCSSESLDHGVLAVGYGVKNGKKYWLVKNSWAETWGQDGYILMSRDKNNQCGIAS 326

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 327  SASYPLV 333


>gi|418210030|gb|AFX65078.1| cysteine protease 8, partial [Tritrichomonas foetus]
 gi|418210032|gb|AFX65079.1| cysteine protease 8, partial [Tritrichomonas foetus]
 gi|418210034|gb|AFX65080.1| cysteine protease 8, partial [Tritrichomonas foetus]
 gi|418210036|gb|AFX65081.1| cysteine protease 8, partial [Tritrichomonas foetus]
 gi|418210038|gb|AFX65082.1| cysteine protease 8, partial [Tritrichomonas foetus]
 gi|418210040|gb|AFX65083.1| cysteine protease 8, partial [Tritrichomonas suis]
 gi|418210124|gb|AFX65125.1| cysteine protease 8, partial [Tritrichomonas suis]
 gi|418210126|gb|AFX65126.1| cysteine protease 8, partial [Tritrichomonas suis]
 gi|418210128|gb|AFX65127.1| cysteine protease 8, partial [Tritrichomonas suis]
          Length = 302

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 148/307 (48%), Gaps = 30/307 (9%)

Query: 659 KAFI--VKRGRQYANDEEIKERFEYFKQDGH--KKHE------RYGTSEFSDRSPEEILC 708
           K+F+  ++   Q+   +E + RF  F  +    K+H         G ++F+  +P E   
Sbjct: 12  KSFLSWMRSTNQFYTGDEYQTRFGIFMANARLVKEHNAAKGKFTTGLNKFAAMTPSEYKA 71

Query: 709 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 768
             GF+         +A R+ V+       K   V ++ DWR+K V  P  DQA CGSCWA
Sbjct: 72  LLGFRMD-------LAQRKAVKST-----KKASV-ESLDWREKGVVNPIKDQAQCGSCWA 118

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEK 825
           FS     E    IK+GKL  +S+  LV+C   C GC+G   + S EY   +    L  E 
Sbjct: 119 FSAIQAAESVNCIKSGKLERYSEQNLVDCVTACYGCNGGLMDASYEYIIDSQNGHLNLEA 178

Query: 826 DYPYKNANGEKFKCAYDK-SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 884
           DYPY   +G    C Y + + V   T    ++ N  + +   +  YGP++V +++     
Sbjct: 179 DYPYTAVDG---TCKYAQYTPVASITKYVNVNQNDEDDLAAKVETYGPVAVAIDASNWSF 235

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
              T    ++ +CSPY L H V  VG+G + +  YW+VRNSWG    + G+ ++   +N 
Sbjct: 236 QLYTGGIYDEPSCSPYSLDHGVGCVGFGAEGSTKYWIVRNSWGTSWGEAGYIRMIWQDNQ 295

Query: 945 CGIEQIA 951
           CGI  +A
Sbjct: 296 CGIASMA 302



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 109/209 (52%), Gaps = 7/209 (3%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR+K V  P  DQA CGSCWAFS     E    IK+GKL  +S+  LV+C   C GC+G
Sbjct: 97  DWREKGVVNPIKDQAQCGSCWAFSAIQAAESVNCIKSGKLERYSEQNLVDCVTACYGCNG 156

Query: 76  CFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDK-SKVKLFTGKDFLHFNGSET 131
              + S EY   +    L  E DYPY   +G    C Y + + V   T    ++ N  + 
Sbjct: 157 GLMDASYEYIIDSQNGHLNLEADYPYTAVDG---TCKYAQYTPVASITKYVNVNQNDEDD 213

Query: 132 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 191
           +   +  YGP++V +++        T    ++ +CSPY L H V  VG+G + +  YW+V
Sbjct: 214 LAAKVETYGPVAVAIDASNWSFQLYTGGIYDEPSCSPYSLDHGVGCVGFGAEGSTKYWIV 273

Query: 192 RNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           RNSWG    + G+ ++   +N CGI  +A
Sbjct: 274 RNSWGTSWGEAGYIRMIWQDNQCGIASMA 302



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 29/307 (9%)

Query: 293 KAFI--VKRGRQYANDEEIKERFEYFKQDGH--KKHE------RYGTSEFSDRSPEEILC 342
           K+F+  ++   Q+   +E + RF  F  +    K+H         G ++F+  +P E   
Sbjct: 12  KSFLSWMRSTNQFYTGDEYQTRFGIFMANARLVKEHNAAKGKFTTGLNKFAAMTPSEYKA 71

Query: 343 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 402
             GF+         +A R+ V+       K   V ++ DWR+K V  P  DQA CGSCWA
Sbjct: 72  LLGFRMD-------LAQRKAVKST-----KKASV-ESLDWREKGVVNPIKDQAQCGSCWA 118

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGG--CDGLEQPIEYTHQAGLESEK 460
           FS     E    IK+GKL  +S+  LV+C   C GC G   D   + I  +    L  E 
Sbjct: 119 FSAIQAAESVNCIKSGKLERYSEQNLVDCVTACYGCNGGLMDASYEYIIDSQNGHLNLEA 178

Query: 461 DYPYRNGNGEKFKCAYDK-SKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHF 519
           DYPY   +G    C Y + + V   T    +  N  + +   +  YGP++V +++    F
Sbjct: 179 DYPYTAVDG---TCKYAQYTPVASITKYVNVNQNDEDDLAAKVETYGPVAVAIDASNWSF 235

Query: 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNA 579
              T    ++ +CSPY L H V  VG+G +    YW+ RNSWG    + G+ ++   +N 
Sbjct: 236 QLYTGGIYDEPSCSPYSLDHGVGCVGFGAEGSTKYWIVRNSWGTSWGEAGYIRMIWQDNQ 295

Query: 580 CGIEQIA 586
           CGI  +A
Sbjct: 296 CGIASMA 302



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            + ++ +CSPY L H V  VG+G +    YW+VRNSWG    + G+ ++   +N CGI  +
Sbjct: 242  IYDEPSCSPYSLDHGVGCVGFGAEGSTKYWIVRNSWGTSWGEAGYIRMIWQDNQCGIASM 301

Query: 1019 A 1019
            A
Sbjct: 302  A 302


>gi|2746723|gb|AAB94925.1| cathepsin S precursor [Mus musculus]
          Length = 340

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 132/271 (48%), Gaps = 21/271 (7%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G ++  D + EEI C+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEISCRMGALRISRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCGGCDG 443
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GCGG   
Sbjct: 135 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 194

Query: 444 LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKI 501
            E         G+E++  YPY+       KC Y+ SK +  T   +  L F   + +K+ 
Sbjct: 195 TEAFQYIIDNGGIEADASYPYK---AMDEKCHYN-SKNRAATCSRYIQLPFGDEDALKEA 250

Query: 502 LYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSW 561
           +   GP+SVG+++    F+       +D +C+  ++ H VL+VGYG  D   YWL +NSW
Sbjct: 251 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 309

Query: 562 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 310 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 22/271 (8%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G ++  D + EEI C+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEISCRMGALRISRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFF 809
                 Q +CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ +      GC G + 
Sbjct: 135 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYM 194

Query: 810 EPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGSETMKKI 866
             + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++   F   + +K+ 
Sbjct: 195 TEAFQYIIDNGGIEADASYPYKAMDE---KCHYN-SKNRAATCSRYIQLPFGDEDALKEA 250

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926
           +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  D   YWLV+NSW
Sbjct: 251 VATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSW 309

Query: 927 GPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           G    D+G+ ++ R N N CGI     Y  I
Sbjct: 310 GLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 13/223 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD  DWR+K        Q  CG+CWAFS  G LEGQ  +KTGKL+  S   LV+C+ + 
Sbjct: 123 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 182

Query: 70  ---CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK +  T   ++ 
Sbjct: 183 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKAMDE---KCHYN-SKNRAATCSRYIQ 238

Query: 126 --FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
             F   + +K+ +   GP+SV +++     +       +D +C+  ++ H VL+VGYG  
Sbjct: 239 LPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVNHGVLVVGYGTL 297

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 298 DGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            V +D +C+  ++ H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI  
Sbjct: 275  VYDDPSCTG-NVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIAS 333

Query: 1018 IAGYATI 1024
               Y  I
Sbjct: 334  YCSYPEI 340


>gi|412992445|emb|CCO18425.1| unknown [Bathycoccus prasinos]
          Length = 500

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 156/337 (46%), Gaps = 48/337 (14%)

Query: 654 ILETFKAFIV------KRGRQYANDEEIKERFEYFKQDGHKKHER------------YGT 695
           + E F+ F+       K+  +   +EE ++R E F+++  +  ER            +G 
Sbjct: 165 LREKFRHFVSVQFPEKKKEYERKTEEEYEKRMEIFQENWKRAIEREIDDRKGGGSAKHGV 224

Query: 696 SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVT 754
           ++F D S EE   +     S  T      D  +  +M    E+D   +P  +DWR +   
Sbjct: 225 TKFFDLSEEEFREQYLGLLSTSTSSSASKDAFRKHQMEAPSEEDLEKLPQYYDWRARGAV 284

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCD 805
            P  DQ  CGSCW FS  G +EG   IKTGKLV  S+ QL++C   C         SGC+
Sbjct: 285 TPVKDQGQCGSCWTFSTTGAIEGANFIKTGKLVSLSEQQLLDCDVGCAPDIPNACDSGCN 344

Query: 806 GCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL----FTGKDFLHFNGS 860
           G     ++EY     GL++EK YPYK    +  +    K    +    F GK+  H    
Sbjct: 345 GGLPSNAMEYIVEHGGLDTEKSYPYKAYKEDTCRAKEGKLGATISNYTFVGKNETH---- 400

Query: 861 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ------ 914
             M   L KYGPLS+ +N+  +  Y G         C+   L H VL+VGYG++      
Sbjct: 401 --MAHALVKYGPLSIGINAAWMQSYVGGVA--CPWLCNKDALDHGVLIVGYGEEGFAPAR 456

Query: 915 -DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 950
               PYW+++NSWG    +EG+++I +    CG+  +
Sbjct: 457 LHKEPYWVIKNSWGMGWGEEGYYRICKDKGNCGVNNM 493



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 114/230 (49%), Gaps = 29/230 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR +    P  DQ  CGSCW FS  G +EG   IKTGKLV  S+ QL++C   C
Sbjct: 272 LPQYYDWRARGAVTPVKDQGQCGSCWTFSTTGAIEGANFIKTGKLVSLSEQQLLDCDVGC 331

Query: 71  ---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL--- 117
                    SGC+G     ++EY     GL++EK YPYK    +  +    K    +   
Sbjct: 332 APDIPNACDSGCNGGLPSNAMEYIVEHGGLDTEKSYPYKAYKEDTCRAKEGKLGATISNY 391

Query: 118 -FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 176
            F GK+  H      M   L KYGPLS+ +N+  +  Y G         C+   L H VL
Sbjct: 392 TFVGKNETH------MAHALVKYGPLSIGINAAWMQSYVGGVA--CPWLCNKDALDHGVL 443

Query: 177 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           +VGYG++          PYW+++NSWG    +EG+++I +    CG+  +
Sbjct: 444 IVGYGEEGFAPARLHKEPYWVIKNSWGMGWGEEGYYRICKDKGNCGVNNM 493



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 160/343 (46%), Gaps = 59/343 (17%)

Query: 288 ILETFKAFIV------KRGRQYANDEEIKERFEYFKQDGHKKHER------------YGT 329
           + E F+ F+       K+  +   +EE ++R E F+++  +  ER            +G 
Sbjct: 165 LREKFRHFVSVQFPEKKKEYERKTEEEYEKRMEIFQENWKRAIEREIDDRKGGGSAKHGV 224

Query: 330 SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVT 388
           ++F D S EE   +     S  T      D  +  +M    E+D   +P  +DWR +   
Sbjct: 225 TKFFDLSEEEFREQYLGLLSTSTSSSASKDAFRKHQMEAPSEEDLEKLPQYYDWRARGAV 284

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCG 439
            P  DQ  CGSCW FS  G +EG   IKTGKLV  S+ QL++C   C         SGC 
Sbjct: 285 TPVKDQGQCGSCWTFSTTGAIEGANFIKTGKLVSLSEQQLLDCDVGCAPDIPNACDSGCN 344

Query: 440 G---CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGK------DFL 490
           G    + +E  +E+    GL++EK YPY+         AY +   +   GK      ++ 
Sbjct: 345 GGLPSNAMEYIVEH---GGLDTEKSYPYK---------AYKEDTCRAKEGKLGATISNYT 392

Query: 491 YFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           +   +ET M   L KYGPLS+G+N+  +  Y G         C+   L H VL+VGYG++
Sbjct: 393 FVGKNETHMAHALVKYGPLSIGINAAWMQSYVGGVA--CPWLCNKDALDHGVLIVGYGEE 450

Query: 550 -------DDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585
                     PYW+ +NSWG    +EG+++I +    CG+  +
Sbjct: 451 GFAPARLHKEPYWVIKNSWGMGWGEEGYYRICKDKGNCGVNNM 493



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 7/61 (11%)

Query: 965  CSPYDLGHAVLLVGYGKQ-------DDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 1017
            C+   L H VL+VGYG++          PYW+++NSWG    +EG+++I +    CG+  
Sbjct: 433  CNKDALDHGVLIVGYGEEGFAPARLHKEPYWVIKNSWGMGWGEEGYYRICKDKGNCGVNN 492

Query: 1018 I 1018
            +
Sbjct: 493  M 493


>gi|346469497|gb|AEO34593.1| hypothetical protein [Amblyomma maculatum]
          Length = 557

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 147/314 (46%), Gaps = 31/314 (9%)

Query: 285 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRS 336
           N +  ++F+ F     R Y +  E   R + F+Q+       ++ +  Y    +  +DR+
Sbjct: 250 NGHTEQSFEDFKETHRRTYDHSVEHDRRRDIFRQNLRFIDSTNRANLGYQVAVNHLADRT 309

Query: 337 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
           PEEI    G   S         D     +     +    +P+  DWR      P  DQA 
Sbjct: 310 PEEISVMRGRLQSR--------DGSSTAEPFPRYKFTAKLPEQIDWRLYGAVTPVKDQAV 361

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE--QPIEYTHQA 454
           CGSCW+F   G LEG Y  KTGKLV  S+ QLV+C+   SG  GCDG E  +  EY  + 
Sbjct: 362 CGSCWSFGTTGELEGAYFRKTGKLVRLSEQQLVDCSWN-SGNNGCDGGEDFRAYEYIRKH 420

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GL S++DY      G+   C   K    + T K ++     + +   L   GP+SV +++
Sbjct: 421 GLASDEDYGAY--IGQDGVCHDTKVNATISTIKSYINITNRDDLLTALANVGPVSVSIDA 478

Query: 515 HL--IHFY-NGT---PIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
            L    FY NG    P  +ND       L HAVL VGYG   + PYWL +NSW     ++
Sbjct: 479 ALRSFSFYSNGVFYDPKCRNDTDS----LDHAVLAVGYGTLQEQPYWLIKNSWSTYWGND 534

Query: 569 GFFKIERGNNACGI 582
           G+  I + +N CG+
Sbjct: 535 GYVLISQKDNNCGV 548



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 145/314 (46%), Gaps = 32/314 (10%)

Query: 651 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRS 702
           N +  ++F+ F     R Y +  E   R + F+Q+       ++ +  Y    +  +DR+
Sbjct: 250 NGHTEQSFEDFKETHRRTYDHSVEHDRRRDIFRQNLRFIDSTNRANLGYQVAVNHLADRT 309

Query: 703 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
           PEEI    G   S         D     +     +    +P+  DWR      P  DQA 
Sbjct: 310 PEEISVMRGRLQSR--------DGSSTAEPFPRYKFTAKLPEQIDWRLYGAVTPVKDQAV 361

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAG 820
           CGSCW+F   G LEG Y  KTGKLV  S+ QLV+C+     +GCDG     + EY  + G
Sbjct: 362 CGSCWSFGTTGELEGAYFRKTGKLVRLSEQQLVDCSWNSGNNGCDGGEDFRAYEYIRKHG 421

Query: 821 LESEKDY-PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           L S++DY  Y   +G    C   K    + T K +++    + +   L   GP+SV +++
Sbjct: 422 LASDEDYGAYIGQDG---VCHDTKVNATISTIKSYINITNRDDLLTALANVGPVSVSIDA 478

Query: 880 DL---IHDYNGT---PIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
            L       NG    P  +ND       L HAVL VGYG     PYWL++NSW     ++
Sbjct: 479 ALRSFSFYSNGVFYDPKCRNDTDS----LDHAVLAVGYGTLQEQPYWLIKNSWSTYWGND 534

Query: 934 GFFKIERGNNACGI 947
           G+  I + +N CG+
Sbjct: 535 GYVLISQKDNNCGV 548



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 110/215 (51%), Gaps = 16/215 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+  DWR      P  DQA CGSCW+F   G LEG Y  KTGKLV  S+ QLV+C+   
Sbjct: 341 LPEQIDWRLYGAVTPVKDQAVCGSCWSFGTTGELEGAYFRKTGKLVRLSEQQLVDCSWNS 400

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDY-PYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GCDG     + EY  + GL S++DY  Y   +G    C   K    + T K +++  
Sbjct: 401 GNNGCDGGEDFRAYEYIRKHGLASDEDYGAYIGQDG---VCHDTKVNATISTIKSYINIT 457

Query: 128 GSETMKKILYKYGPLSVLLNSDL---IHDYNGT---PIRKNDETCSPYDLGHAVLLVGYG 181
             + +   L   GP+SV +++ L       NG    P  +ND       L HAVL VGYG
Sbjct: 458 NRDDLLTALANVGPVSVSIDAALRSFSFYSNGVFYDPKCRNDTDS----LDHAVLAVGYG 513

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
                PYWL++NSW     ++G+  I + +N CG+
Sbjct: 514 TLQEQPYWLIKNSWSTYWGNDGYVLISQKDNNCGV 548



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            L HAVL VGYG   + PYWL++NSW     ++G+  I + +N CG+
Sbjct: 503  LDHAVLAVGYGTLQEQPYWLIKNSWSTYWGNDGYVLISQKDNNCGV 548


>gi|440906716|gb|ELR56945.1| Cathepsin S, partial [Bos grunniens mutus]
          Length = 342

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 121/222 (54%), Gaps = 11/222 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +PD+ DWR+K        Q ACGSCWAFS  G LE Q  +KTGKLV  S   LV+C+   
Sbjct: 126 LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 185

Query: 436 SGCGGCDG--LEQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLY 491
            G  GC+G  + +  +Y     G++SE  YPY+  +G   KC YD K++    +    L 
Sbjct: 186 YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDG---KCQYDVKNRAATCSRYIELP 242

Query: 492 FNGSETMKKILYKYGPLSVGLN-SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
           F   E +K+ +   GP+SVG++ SH   F   T +   D +C+  ++ H VL+VGYG  D
Sbjct: 243 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYY-DPSCTQ-NVNHGVLVVGYGNLD 300

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
              YWL +NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 301 GKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIASYPSYPEI 342



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 117/221 (52%), Gaps = 10/221 (4%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
           +PD+ DWR+K        Q ACGSCWAFS  G LE Q  +KTGKLV  S   LV+C+   
Sbjct: 126 LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 185

Query: 801 --CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLH 856
               GC+G F   + +Y     G++SE  YPYK  +G   KC YD K++    +    L 
Sbjct: 186 YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDG---KCQYDVKNRAATCSRYIELP 242

Query: 857 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
           F   E +K+ +   GP+SV +++     +        D +C+  ++ H VL+VGYG  D 
Sbjct: 243 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGNLDG 301

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
             YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 302 KDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIASYPSYPEI 342



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD+ DWR+K        Q  CGSCWAFS  G LE Q  +KTGKLV  S   LV+C+   
Sbjct: 126 LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 185

Query: 70  --CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLH 125
               GC+G F   + +Y     G++SE  YPYK  +G   KC YD K++    +    L 
Sbjct: 186 YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDG---KCQYDVKNRAATCSRYIELP 242

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           F   E +K+ +   GP+SV +++     +        D +C+  ++ H VL+VGYG  D 
Sbjct: 243 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGNLDG 301

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 302 KDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIASYPSYPEI 342



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 10/104 (9%)

Query: 928  PIGPDEGFFKI--ERGNNACGIEQIAGYATIDVVKN----DETCSPYDLGHAVLLVGYGK 981
            P G +E   +    +G  + GI+  A +++  + K     D +C+  ++ H VL+VGYG 
Sbjct: 242  PFGSEEALKEAVANKGPVSVGID--ASHSSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGN 298

Query: 982  QDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
             D   YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 299  LDGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIASYPSYPEI 342


>gi|154332647|ref|XP_001562140.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059588|emb|CAM37170.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 40/314 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 710 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 144

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---TH 817
             CGSCWAFS  G +E Q+ + T  L+  S+ +LV C     GC+G     + ++     
Sbjct: 145 GMCGSCWAFSAIGNIESQWYLATHSLISLSEQELVSCDDVDEGCNGGLMLQAFDWLLNNR 204

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHFNGSETMKKILYKYGPLSV 875
              + +   YPY + NG   +C+     V      G   +  N  +TM   L   GP+++
Sbjct: 205 NGAVYTGVSYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESN-EDTMAAWLAANGPIAI 263

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
            +++     Y G  +     +C    L H VLLVGY     +PYWL++NSWG    ++G+
Sbjct: 264 AVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGEVPYWLIKNSWGKNWGEKGY 319

Query: 936 FKIERGNNACGIEQ 949
            ++ +G N C I++
Sbjct: 320 VRVRKGTNECLIQE 333



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 143/314 (45%), Gaps = 39/314 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 344 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 144

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---T 451
             CGSCWAFS  G +E Q+ + T  L+  S+ +LV C     GC G   L Q  ++    
Sbjct: 145 GMCGSCWAFSAIGNIESQWYLATHSLISLSEQELVSCDDVDEGCNGGLML-QAFDWLLNN 203

Query: 452 HQAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSETMKKILYKYGPLSV 510
               + +   YPY +GNG   +C+     V   +        +  +TM   L   GP+++
Sbjct: 204 RNGAVYTGVSYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAI 263

Query: 511 GLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGF 570
            +++     Y G  +     +C    L H VLLVGY    ++PYWL +NSWG    ++G+
Sbjct: 264 AVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGEVPYWLIKNSWGKNWGEKGY 319

Query: 571 FKIERGNNACGIEQ 584
            ++ +G N C I++
Sbjct: 320 VRVRKGTNECLIQE 333



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 10/212 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P A DWR+K    P  DQ  CGSCWAFS  G +E Q+ + T  L+  S+ +LV C     
Sbjct: 127 PAAVDWREKGAVTPVKDQGMCGSCWAFSAIGNIESQWYLATHSLISLSEQELVSCDDVDE 186

Query: 72  GCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHF 126
           GC+G     + ++        + +   YPY + NG   +C+     V      G   +  
Sbjct: 187 GCNGGLMLQAFDWLLNNRNGAVYTGVSYPYVSGNGSVPECSESSDLVIGAYIDGHVTIES 246

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           N  +TM   L   GP+++ +++     Y G  +     +C    L H VLLVGY     +
Sbjct: 247 N-EDTMAAWLAANGPIAIAVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           PYWL++NSWG    ++G+ ++ +G N C I++
Sbjct: 302 PYWLIKNSWGKNWGEKGYVRVRKGTNECLIQE 333


>gi|218478062|dbj|BAH03397.1| cathepsin L-like cysteine peptidase [Taenia asiatica]
          Length = 338

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 168/353 (47%), Gaps = 33/353 (9%)

Query: 621 LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER-- 678
           +  P L   I   + A V+T A+          +   +  + ++ GR Y+  EE   R  
Sbjct: 2   IVTPFLLLLIIHPLAAVVETSAL-----LTERELSRQWIGWKLQHGRVYSEKEEAYRRGI 56

Query: 679 ----FEYFKQDGHKKH---ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 729
                 Y K    + +   E Y  G ++F+D    E   +       R   R    R ++
Sbjct: 57  FARNLLYIKGQNRRFNAGLESYSTGLNQFADLESSEFSERF---LGTRPESRAAGKRGRI 113

Query: 730 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 789
            K L        +PD  DWR KN+     +Q  CGSCWAFS  G LEG +A KTGKL+  
Sbjct: 114 WKALASA---ADLPDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISL 170

Query: 790 SKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVK 847
           S+ QLV+C+ +    GC+G +   + +Y  +  +E E  YPY+  +G    C Y++S + 
Sbjct: 171 SEQQLVDCSLKNGNDGCNGGYMSYAFKYLEEHSIEPESAYPYRATDG---PCRYNES-LG 226

Query: 848 LFTGKDFLHF-NGSET-MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGH 904
           + T  D      G+ET + + +   GP+S+ ++ S L   +    I K+   CS   L H
Sbjct: 227 VGTVTDIGDIPEGNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKS-HWCSSKFLNH 285

Query: 905 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
            VL +GYGKQ+  PYWLV+NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 286 GVLAIGYGKQEGKPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 338



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 165/353 (46%), Gaps = 32/353 (9%)

Query: 255 LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER-- 312
           +  P L   I   + A V+T A+          +   +  + ++ GR Y+  EE   R  
Sbjct: 2   IVTPFLLLLIIHPLAAVVETSAL-----LTERELSRQWIGWKLQHGRVYSEKEEAYRRGI 56

Query: 313 ----FEYFKQDGHKKH---ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 363
                 Y K    + +   E Y  G ++F+D    E   +       R   R    R ++
Sbjct: 57  FARNLLYIKGQNRRFNAGLESYSTGLNQFADLESSEFSERF---LGTRPESRAAGKRGRI 113

Query: 364 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 423
            K L        +PD  DWR KN+     +Q  CGSCWAFS  G LEG +A KTGKL+  
Sbjct: 114 WKALASA---ADLPDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISL 170

Query: 424 SKSQLVECAKQCSGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKV 481
           S+ QLV+C+ + +G  GC+G  +    +Y  +  +E E  YPYR  +G    C Y++S +
Sbjct: 171 SEQQLVDCSLK-NGNDGCNGGYMSYAFKYLEEHSIEPESAYPYRATDG---PCRYNES-L 225

Query: 482 KLFTGKDFLYF-NGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGH 539
            + T  D      G+ET + + +   GP+S+ +++  + F            CS   L H
Sbjct: 226 GVGTVTDIGDIPEGNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKSHWCSSKFLNH 285

Query: 540 AVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
            VL +GYGKQ+  PYWL +NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 286 GVLAIGYGKQEGKPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 338



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 11/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD  DWR KN+     +Q +CGSCWAFS  G LEG +A KTGKL+  S+ QLV+C+ + 
Sbjct: 123 LPDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLKN 182

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-N 127
              GC+G +   + +Y  +  +E E  YPY+  +G    C Y++S + + T  D      
Sbjct: 183 GNDGCNGGYMSYAFKYLEEHSIEPESAYPYRATDG---PCRYNES-LGVGTVTDIGDIPE 238

Query: 128 GSET-MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           G+ET + + +   GP+S+ ++ S L   +    I K+   CS   L H VL +GYGKQ+ 
Sbjct: 239 GNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKS-HWCSSKFLNHGVLAIGYGKQEG 297

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            PYWLV+NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 298 KPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 338



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            CS   L H VL +GYGKQ+  PYWLV+NSWG     +G+  + +  +N CG+  +A +  
Sbjct: 278  CSSKFLNHGVLAIGYGKQEGKPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPY 337

Query: 1024 I 1024
            +
Sbjct: 338  V 338


>gi|154332649|ref|XP_001562141.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059589|emb|CAM37171.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 40/314 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 710 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 144

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---TH 817
             CGSCWAFS  G +E Q+ + T  L+  S+ +LV C     GC+G     + ++     
Sbjct: 145 GMCGSCWAFSAIGNIESQWYLATHSLISLSEQELVSCDDVDEGCNGGLMLQAFDWLLNNR 204

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHFNGSETMKKILYKYGPLSV 875
              + +   YPY + NG   +C+     V      G   +  N  +TM   L   GP+++
Sbjct: 205 NGAVYTGVSYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESN-EDTMAAWLAANGPIAI 263

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
            +++     Y G  +     +C    L H VLLVGY     +PYWL++NSWG    ++G+
Sbjct: 264 AVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGEVPYWLIKNSWGENWGEKGY 319

Query: 936 FKIERGNNACGIEQ 949
            ++ +G N C I++
Sbjct: 320 VRVRKGTNECLIQE 333



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 143/314 (45%), Gaps = 39/314 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 344 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 144

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---T 451
             CGSCWAFS  G +E Q+ + T  L+  S+ +LV C     GC G   L Q  ++    
Sbjct: 145 GMCGSCWAFSAIGNIESQWYLATHSLISLSEQELVSCDDVDEGCNGGLML-QAFDWLLNN 203

Query: 452 HQAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSETMKKILYKYGPLSV 510
               + +   YPY +GNG   +C+     V   +        +  +TM   L   GP+++
Sbjct: 204 RNGAVYTGVSYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAI 263

Query: 511 GLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGF 570
            +++     Y G  +     +C    L H VLLVGY    ++PYWL +NSWG    ++G+
Sbjct: 264 AVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGEVPYWLIKNSWGENWGEKGY 319

Query: 571 FKIERGNNACGIEQ 584
            ++ +G N C I++
Sbjct: 320 VRVRKGTNECLIQE 333



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 10/212 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P A DWR+K    P  DQ  CGSCWAFS  G +E Q+ + T  L+  S+ +LV C     
Sbjct: 127 PAAVDWREKGAVTPVKDQGMCGSCWAFSAIGNIESQWYLATHSLISLSEQELVSCDDVDE 186

Query: 72  GCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHF 126
           GC+G     + ++        + +   YPY + NG   +C+     V      G   +  
Sbjct: 187 GCNGGLMLQAFDWLLNNRNGAVYTGVSYPYVSGNGSVPECSESSDLVIGAYIDGHVTIES 246

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           N  +TM   L   GP+++ +++     Y G  +     +C    L H VLLVGY     +
Sbjct: 247 N-EDTMAAWLAANGPIAIAVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           PYWL++NSWG    ++G+ ++ +G N C I++
Sbjct: 302 PYWLIKNSWGENWGEKGYVRVRKGTNECLIQE 333


>gi|195455845|ref|XP_002074891.1| GK22909 [Drosophila willistoni]
 gi|194170976|gb|EDW85877.1| GK22909 [Drosophila willistoni]
          Length = 370

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 167/386 (43%), Gaps = 52/386 (13%)

Query: 240 MLIQAVFLLCGVASC------------LCLPSLTDRITDQVVARVDTLAIEGSLTFDNEN 287
            L+    +L G+AS               + ++ +R+ D++      L    +L      
Sbjct: 3   FLVAFPLILAGLASAQFGGLRPGQRLGAAIGNVANRVQDRLAGIASRLPAPPAL-----R 57

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYGTS-------EFSDR 335
            +E F  F+ + G+ Y N+ +       F       D   +    GTS        F+D 
Sbjct: 58  DVENFGDFLTQSGKTYLNEADRVLHENVFSARKNLVDAGNEAFSKGTSTYKLAVNAFADL 117

Query: 336 SPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
           +  E L + TG + S +   ++ A R+        V+  G VPDA+DWR++        Q
Sbjct: 118 TNAEFLSQLTGRRKSNQGESKVAASRQSAH-----VQPGGNVPDAFDWRQQGGVTSVKYQ 172

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT--- 451
             CGSCWAF+  G +EG    KTGKL   S+  LV+C     G  GCDG  Q  EY    
Sbjct: 173 GTCGSCWAFATTGAIEGHVFRKTGKLPNLSEQNLVDCGSLDFGLNGCDGGYQ--EYAMAF 230

Query: 452 ---HQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYKYGP 507
               Q G+     YPY +    K  C Y  S      TG   +       MKK++   GP
Sbjct: 231 INEKQRGISKSDQYPYID---NKETCKYTNSLSGAQITGFASIPPKDEALMKKVIATLGP 287

Query: 508 LSVGLNS--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           L+  LN    L+ + +G      DE C+  +  H+VL+VGYG +    YW+ +NSW    
Sbjct: 288 LACSLNGLESLLLYKSGI---YADEKCNDDEPNHSVLVVGYGSEKGQDYWIIKNSWDKNW 344

Query: 566 PDEGFFKIERGNNACGIEQIAGYATI 591
            ++G+F++ RG N CGI     Y  +
Sbjct: 345 GEDGYFRLPRGKNFCGIALECSYPIV 370



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 170/384 (44%), Gaps = 49/384 (12%)

Query: 606 MLIQAVFLLCGVASC------------LCLPSLTDRITDQVVARVDTLAIEGSLTFDNEN 653
            L+    +L G+AS               + ++ +R+ D++      L    +L      
Sbjct: 3   FLVAFPLILAGLASAQFGGLRPGQRLGAAIGNVANRVQDRLAGIASRLPAPPAL-----R 57

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYGTS-------EFSDR 701
            +E F  F+ + G+ Y N+ +       F       D   +    GTS        F+D 
Sbjct: 58  DVENFGDFLTQSGKTYLNEADRVLHENVFSARKNLVDAGNEAFSKGTSTYKLAVNAFADL 117

Query: 702 SPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
           +  E L + TG + S +   ++ A R+        V+  G VPDA+DWR++        Q
Sbjct: 118 TNAEFLSQLTGRRKSNQGESKVAASRQSAH-----VQPGGNVPDAFDWRQQGGVTSVKYQ 172

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK---QCSGCDGCFFEPSIEYTH 817
             CGSCWAF+  G +EG    KTGKL   S+  LV+C       +GCDG + E ++ + +
Sbjct: 173 GTCGSCWAFATTGAIEGHVFRKTGKLPNLSEQNLVDCGSLDFGLNGCDGGYQEYAMAFIN 232

Query: 818 --QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLS 874
             Q G+     YPY +    K  C Y  S      TG   +       MKK++   GPL+
Sbjct: 233 EKQRGISKSDQYPYID---NKETCKYTNSLSGAQITGFASIPPKDEALMKKVIATLGPLA 289

Query: 875 VLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
             LN    L+   +G      DE C+  +  H+VL+VGYG +    YW+++NSW     +
Sbjct: 290 CSLNGLESLLLYKSGI---YADEKCNDDEPNHSVLVVGYGSEKGQDYWIIKNSWDKNWGE 346

Query: 933 EGFFKIERGNNACGIEQIAGYATI 956
           +G+F++ RG N CGI     Y  +
Sbjct: 347 DGYFRLPRGKNFCGIALECSYPIV 370



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 115/230 (50%), Gaps = 14/230 (6%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
            V+  G VPDA+DWR++        Q  CGSCWAF+  G +EG    KTGKL   S+  L
Sbjct: 147 HVQPGGNVPDAFDWRQQGGVTSVKYQGTCGSCWAFATTGAIEGHVFRKTGKLPNLSEQNL 206

Query: 64  VECAK---QCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANGEKFKCAYDKS-KVKL 117
           V+C       +GCDG + E ++ + +  Q G+     YPY +    K  C Y  S     
Sbjct: 207 VDCGSLDFGLNGCDGGYQEYAMAFINEKQRGISKSDQYPYID---NKETCKYTNSLSGAQ 263

Query: 118 FTGKDFLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAV 175
            TG   +       MKK++   GPL+  LN    L+   +G      DE C+  +  H+V
Sbjct: 264 ITGFASIPPKDEALMKKVIATLGPLACSLNGLESLLLYKSGI---YADEKCNDDEPNHSV 320

Query: 176 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           L+VGYG +    YW+++NSW     ++G+F++ RG N CGI     Y  +
Sbjct: 321 LVVGYGSEKGQDYWIIKNSWDKNWGEDGYFRLPRGKNFCGIALECSYPIV 370



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 38/63 (60%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            DE C+  +  H+VL+VGYG +    YW+++NSW     ++G+F++ RG N CGI     Y
Sbjct: 308  DEKCNDDEPNHSVLVVGYGSEKGQDYWIIKNSWDKNWGEDGYFRLPRGKNFCGIALECSY 367

Query: 1022 ATI 1024
              +
Sbjct: 368  PIV 370


>gi|390337645|ref|XP_001199228.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 160/337 (47%), Gaps = 35/337 (10%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GH 687
           + +  SL+    +  E +K +  + G++Y +DEE   R   ++++             GH
Sbjct: 11  VCVVSSLSMSFTDFDEDWKEWKNEHGKRYLSDEEEASRRLIWQKNLDIVIRHNLKYDLGH 70

Query: 688 KKHERYGTSEFSD-RSPEEILCKTGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPD 744
             ++  G ++F+D ++ E +   TGF+         V    K  K    +     G +P 
Sbjct: 71  FTYD-LGMNQFADLQNKEFVAMMTGFR---------VNGTSKAAKGSTFLPPNNVGKLPK 120

Query: 745 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 804
             DWR K    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+ +  GC
Sbjct: 121 TVDWRTKGYVTPVKDQGQCGSCWAFSATGSLEGQHFKKTGKLVSLSEQNLVDCSDKNYGC 180

Query: 805 DGCFFEPSIEYTHQA-GLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSE- 861
           +G   + + +Y   A G+++E+ YPY   +G   FK A   + V  +T       +GSE 
Sbjct: 181 NGGLMDRAFQYIIDAGGIDTEESYPYIAMDGNCHFKTANVGATVTGYTDVT----SGSEK 236

Query: 862 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DNIPYW 920
            ++K +   GP+SV +++             N+  CS   L H VL VGYG   D   YW
Sbjct: 237 ALQKAVAHIGPISVAIDASHFSFQLYQSGVYNEPGCSSTLLDHGVLAVGYGTTIDGTDYW 296

Query: 921 LVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +V+NSW       G+  + R  +N CGI   A Y  +
Sbjct: 297 IVKNSWAETWGMNGYIWMSRNKDNQCGIATQASYPLV 333



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 160/338 (47%), Gaps = 36/338 (10%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GH 321
           + +  SL+    +  E +K +  + G++Y +DEE   R   ++++             GH
Sbjct: 11  VCVVSSLSMSFTDFDEDWKEWKNEHGKRYLSDEEEASRRLIWQKNLDIVIRHNLKYDLGH 70

Query: 322 KKHERYGTSEFSD-RSPEEILCKTGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPD 378
             ++  G ++F+D ++ E +   TGF+         V    K  K    +     G +P 
Sbjct: 71  FTYD-LGMNQFADLQNKEFVAMMTGFR---------VNGTSKAAKGSTFLPPNNVGKLPK 120

Query: 379 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 438
             DWR K    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+ +  GC
Sbjct: 121 TVDWRTKGYVTPVKDQGQCGSCWAFSATGSLEGQHFKKTGKLVSLSEQNLVDCSDKNYGC 180

Query: 439 GGCDGLEQPIEYTHQA-GLESEKDYPYRNGNGE-KFKCAYDKSKVKLFTGKDFLYFNGSE 496
            G   +++  +Y   A G+++E+ YPY   +G   FK A   + V  +T       +GSE
Sbjct: 181 NG-GLMDRAFQYIIDAGGIDTEESYPYIAMDGNCHFKTANVGATVTGYTDVT----SGSE 235

Query: 497 -TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DDIPY 554
             ++K +   GP+SV +++    F        N+  CS   L H VL VGYG   D   Y
Sbjct: 236 KALQKAVAHIGPISVAIDASHFSFQLYQSGVYNEPGCSSTLLDHGVLAVGYGTTIDGTDY 295

Query: 555 WLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           W+ +NSW       G+  + R  +N CGI   A Y  +
Sbjct: 296 WIVKNSWAETWGMNGYIWMSRNKDNQCGIATQASYPLV 333



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 114/222 (51%), Gaps = 9/222 (4%)

Query: 9   GPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 68
           G +P   DWR K    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+ 
Sbjct: 116 GKLPKTVDWRTKGYVTPVKDQGQCGSCWAFSATGSLEGQHFKKTGKLVSLSEQNLVDCSD 175

Query: 69  QCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHF 126
           +  GC+G   + + +Y   A G+++E+ YPY   +G   FK A   + V  +T       
Sbjct: 176 KNYGCNGGLMDRAFQYIIDAGGIDTEESYPYIAMDGNCHFKTANVGATVTGYTDVT---- 231

Query: 127 NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-D 184
           +GSE  ++K +   GP+SV +++             N+  CS   L H VL VGYG   D
Sbjct: 232 SGSEKALQKAVAHIGPISVAIDASHFSFQLYQSGVYNEPGCSSTLLDHGVLAVGYGTTID 291

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
              YW+V+NSW       G+  + R  +N CGI   A Y  +
Sbjct: 292 GTDYWIVKNSWAETWGMNGYIWMSRNKDNQCGIATQASYPLV 333



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQ-DDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIE 1016
            V N+  CS   L H VL VGYG   D   YW+V+NSW       G+  + R  +N CGI 
Sbjct: 266  VYNEPGCSSTLLDHGVLAVGYGTTIDGTDYWIVKNSWAETWGMNGYIWMSRNKDNQCGIA 325

Query: 1017 QIAGYATI 1024
              A Y  +
Sbjct: 326  TQASYPLV 333


>gi|313221004|emb|CBY31836.1| unnamed protein product [Oikopleura dioica]
          Length = 323

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 113/223 (50%), Gaps = 11/223 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P+P +WDWRK N   P  DQ  CGSCW FS  G +E   AI   +    S+ QLV+CA  
Sbjct: 101 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGA 160

Query: 70  CS--GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
            +  GC+G     + EY   A G+ +E DYPY   +G    C +D+ K  +         
Sbjct: 161 FNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG---NCVFDQKKAAVHVYGSVNIT 217

Query: 127 NGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            G E  M + +  Y P+S+      D +H  +GT   K D   SP D+ HAVL VG+G  
Sbjct: 218 RGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSSK-DCKGSPTDVNHAVLAVGFGTD 276

Query: 184 D-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +W V+NSW     ++G+F I+RG N CG+ Q   +A I
Sbjct: 277 GAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQCTSFALI 319



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 113/223 (50%), Gaps = 11/223 (4%)

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
           P+P +WDWRK N   P  DQ  CGSCW FS  G +E   AI   +    S+ QLV+CA  
Sbjct: 101 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGA 160

Query: 801 CS--GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
            +  GC+G     + EY   A G+ +E DYPY   +G    C +D+ K  +         
Sbjct: 161 FNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG---NCVFDQKKAAVHVYGSVNIT 217

Query: 858 NGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
            G E  M + +  Y P+S+      D +H  +GT   K D   SP D+ HAVL VG+G  
Sbjct: 218 RGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSSK-DCKGSPTDVNHAVLAVGFGTD 276

Query: 915 D-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
                +W V+NSW     ++G+F I+RG N CG+ Q   +A I
Sbjct: 277 GAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQCTSFALI 319



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 111/223 (49%), Gaps = 10/223 (4%)

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
           P+P +WDWRK N   P  DQ  CGSCW FS  G +E   AI   +    S+ QLV+CA  
Sbjct: 101 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGA 160

Query: 435 CSGCGGCDGL-EQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            +  G   GL  Q  EY   A G+ +E DYPY   +G    C +D+ K  +         
Sbjct: 161 FNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG---NCVFDQKKAAVHVYGSVNIT 217

Query: 493 NGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
            G E  M + +  Y P+S+        +H+ +GT   K D   SP D+ HAVL VG+G  
Sbjct: 218 RGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSSK-DCKGSPTDVNHAVLAVGFGTD 276

Query: 550 D-DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
                +W  +NSW     ++G+F I+RG N CG+ Q   +A I
Sbjct: 277 GAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQCTSFALI 319


>gi|169659203|dbj|BAG12786.1| putative cysteine protease [Sorogena stoianovitchae]
          Length = 293

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 133/264 (50%), Gaps = 29/264 (10%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G ++F+D + EE             Y  +V +  KV+     V +DG   +  DWR+K  
Sbjct: 49  GLNQFADLTTEEF---------SSLYLGLVLE-NKVQASESVVLQDGDSEENVDWRQKGA 98

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI 813
             P  DQ +CGSCWAFS  G +EG     TGKL+  S+ QLV+C  +C+GC+G     + 
Sbjct: 99  VTPVKDQKSCGSCWAFSATGAMEGALVKSTGKLINLSEQQLVDCVTKCNGCNGGLMTAAF 158

Query: 814 EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 873
           +Y    G  +EKDYPYK  +G   + A D +K+K   G + +  N  + +K  +    PL
Sbjct: 159 DYVLGRGRATEKDYPYKGVDGRCKQTATD-NKIK---GYNNVPQNNYKALKAAVAS--PL 212

Query: 874 SVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           SV +N +  I  Y    I   D  C    L H VL VGY  +D   YW+V+NSWG    +
Sbjct: 213 SVAVNAAGTIQRYKSGVI---DANCGT-RLDHGVLAVGYQGED---YWIVKNSWGNGYGE 265

Query: 933 EGFFKIERGNN-----ACGIEQIA 951
            G+F+++ G        CGI  +A
Sbjct: 266 NGYFRVKMGTQNGGAGVCGINMMA 289



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 116/222 (52%), Gaps = 19/222 (8%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           V +DG   +  DWR+K    P  DQ  CGSCWAFS  G +EG     TGKL+  S+ QLV
Sbjct: 81  VLQDGDSEENVDWRQKGAVTPVKDQKSCGSCWAFSATGAMEGALVKSTGKLINLSEQQLV 140

Query: 65  ECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +C  +C+GC+G     + +Y    G  +EKDYPYK  +G   + A D +K+K   G + +
Sbjct: 141 DCVTKCNGCNGGLMTAAFDYVLGRGRATEKDYPYKGVDGRCKQTATD-NKIK---GYNNV 196

Query: 125 HFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
             N  + +K  +    PLSV +N +  I  Y    I   D  C    L H VL VGY  +
Sbjct: 197 PQNNYKALKAAVAS--PLSVAVNAAGTIQRYKSGVI---DANCGT-RLDHGVLAVGYQGE 250

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNN-----ACGIEQIA 220
           D   YW+V+NSWG    + G+F+++ G        CGI  +A
Sbjct: 251 D---YWIVKNSWGNGYGENGYFRVKMGTQNGGAGVCGINMMA 289



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 131/265 (49%), Gaps = 30/265 (11%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G ++F+D + EE             Y  +V +  KV+     V +DG   +  DWR+K  
Sbjct: 49  GLNQFADLTTEEF---------SSLYLGLVLE-NKVQASESVVLQDGDSEENVDWRQKGA 98

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQP 447
             P  DQ +CGSCWAFS  G +EG     TGKL+  S+ QLV+C  +C+GC G   +   
Sbjct: 99  VTPVKDQKSCGSCWAFSATGAMEGALVKSTGKLINLSEQQLVDCVTKCNGCNG-GLMTAA 157

Query: 448 IEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGP 507
            +Y    G  +EKDYPY+  +G   + A D +K+K   G + +  N  + +K  +    P
Sbjct: 158 FDYVLGRGRATEKDYPYKGVDGRCKQTATD-NKIK---GYNNVPQNNYKALKAAVAS--P 211

Query: 508 LSVGLNSH-LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGP 566
           LSV +N+   I  Y    I   D  C    L H VL VGY  +D   YW+ +NSWG    
Sbjct: 212 LSVAVNAAGTIQRYKSGVI---DANCGT-RLDHGVLAVGYQGED---YWIVKNSWGNGYG 264

Query: 567 DEGFFKIERGNN-----ACGIEQIA 586
           + G+F+++ G        CGI  +A
Sbjct: 265 ENGYFRVKMGTQNGGAGVCGINMMA 289



 Score = 43.1 bits (100), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 8/55 (14%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNN-----ACGIEQIA 1019
            L H VL VGY  +D   YW+V+NSWG    + G+F+++ G        CGI  +A
Sbjct: 238  LDHGVLAVGYQGED---YWIVKNSWGNGYGENGYFRVKMGTQNGGAGVCGINMMA 289


>gi|313213098|emb|CBY36961.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 113/223 (50%), Gaps = 11/223 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P+P +WDWRK N   P  DQ  CGSCW FS  G +E   AI   +    S+ QLV+CA  
Sbjct: 104 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGA 163

Query: 70  CS--GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
            +  GC+G     + EY   A G+ +E DYPY   +G    C +D+ K  +         
Sbjct: 164 FNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG---NCVFDQKKAAVHVYGSVNIT 220

Query: 127 NGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            G E  M + +  Y P+S+      D +H  +GT   K D   SP D+ HAVL VG+G  
Sbjct: 221 RGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSSK-DCKGSPTDVNHAVLAVGFGTD 279

Query: 184 D-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +W V+NSW     ++G+F I+RG N CG+ Q   +A I
Sbjct: 280 GAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQCTSFALI 322



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 113/223 (50%), Gaps = 11/223 (4%)

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
           P+P +WDWRK N   P  DQ  CGSCW FS  G +E   AI   +    S+ QLV+CA  
Sbjct: 104 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGA 163

Query: 801 CS--GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
            +  GC+G     + EY   A G+ +E DYPY   +G    C +D+ K  +         
Sbjct: 164 FNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG---NCVFDQKKAAVHVYGSVNIT 220

Query: 858 NGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
            G E  M + +  Y P+S+      D +H  +GT   K D   SP D+ HAVL VG+G  
Sbjct: 221 RGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSSK-DCKGSPTDVNHAVLAVGFGTD 279

Query: 915 D-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
                +W V+NSW     ++G+F I+RG N CG+ Q   +A I
Sbjct: 280 GAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQCTSFALI 322



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 111/223 (49%), Gaps = 10/223 (4%)

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
           P+P +WDWRK N   P  DQ  CGSCW FS  G +E   AI   +    S+ QLV+CA  
Sbjct: 104 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGA 163

Query: 435 CSGCGGCDGL-EQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            +  G   GL  Q  EY   A G+ +E DYPY   +G    C +D+ K  +         
Sbjct: 164 FNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG---NCVFDQKKAAVHVYGSVNIT 220

Query: 493 NGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
            G E  M + +  Y P+S+        +H+ +GT   K D   SP D+ HAVL VG+G  
Sbjct: 221 RGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSSK-DCKGSPTDVNHAVLAVGFGTD 279

Query: 550 D-DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
                +W  +NSW     ++G+F I+RG N CG+ Q   +A I
Sbjct: 280 GAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQCTSFALI 322


>gi|108735858|gb|ABG00260.1| cathepsin L1 [Fasciola hepatica]
          Length = 219

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 112/209 (53%), Gaps = 8/209 (3%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGC 73
           DWR+        DQ +CGSCWAFS  G ++GQY       + FS+ QLV+C++    +GC
Sbjct: 6   DWRESGYVTEVKDQGNCGSCWAFSTTGTMKGQYMKNERTSISFSEQQLVDCSRPWGNNGC 65

Query: 74  DGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSETM 132
            G   E + EY  Q GLE+E  YPY    G    C YD K  V   TG   +H      +
Sbjct: 66  GGGLMENAYEYLKQFGLETESSYPYSAVEG---PCRYDRKLGVAKVTGYYTVHSGDEVEL 122

Query: 133 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 192
           + ++   GP +V L+++L      + I  + +TCSP  L H VL VGYG QD   YW+V+
Sbjct: 123 QNLVGGEGPPAVALDAELDFMMYRSGIYXS-QTCSPDRLSHGVLAVGYGTQDGTDYWIVK 181

Query: 193 NSWGPIGPDEGFFKIERG-NNACGIEQIA 220
           NSWG    ++G+ ++ R   N CGI  +A
Sbjct: 182 NSWGTWWGEDGYIRMVRNRGNMCGIASLA 210



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 111/209 (53%), Gaps = 8/209 (3%)

Query: 747 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGC 804
           DWR+        DQ  CGSCWAFS  G ++GQY       + FS+ QLV+C++    +GC
Sbjct: 6   DWRESGYVTEVKDQGNCGSCWAFSTTGTMKGQYMKNERTSISFSEQQLVDCSRPWGNNGC 65

Query: 805 DGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSETM 863
            G   E + EY  Q GLE+E  YPY    G    C YD K  V   TG   +H      +
Sbjct: 66  GGGLMENAYEYLKQFGLETESSYPYSAVEG---PCRYDRKLGVAKVTGYYTVHSGDEVEL 122

Query: 864 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 923
           + ++   GP +V L+++L      + I  + +TCSP  L H VL VGYG QD   YW+V+
Sbjct: 123 QNLVGGEGPPAVALDAELDFMMYRSGIYXS-QTCSPDRLSHGVLAVGYGTQDGTDYWIVK 181

Query: 924 NSWGPIGPDEGFFKIERG-NNACGIEQIA 951
           NSWG    ++G+ ++ R   N CGI  +A
Sbjct: 182 NSWGTWWGEDGYIRMVRNRGNMCGIASLA 210



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 110/210 (52%), Gaps = 9/210 (4%)

Query: 381 DWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGC 438
           DWR+        DQ  CGSCWAFS  G ++GQY       + FS+ QLV+C++    +GC
Sbjct: 6   DWRESGYVTEVKDQGNCGSCWAFSTTGTMKGQYMKNERTSISFSEQQLVDCSRPWGNNGC 65

Query: 439 GGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLYFNGSET 497
           GG   +E   EY  Q GLE+E  YPY    G    C YD K  V   TG   ++      
Sbjct: 66  GG-GLMENAYEYLKQFGLETESSYPYSAVEG---PCRYDRKLGVAKVTGYYTVHSGDEVE 121

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLA 557
           ++ ++   GP +V L++ L      + I  + +TCSP  L H VL VGYG QD   YW+ 
Sbjct: 122 LQNLVGGEGPPAVALDAELDFMMYRSGIYXS-QTCSPDRLSHGVLAVGYGTQDGTDYWIV 180

Query: 558 RNSWGPIGPDEGFFKIERG-NNACGIEQIA 586
           +NSWG    ++G+ ++ R   N CGI  +A
Sbjct: 181 KNSWGTWWGEDGYIRMVRNRGNMCGIASLA 210



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            +   +TCSP  L H VL VGYG QD   YW+V+NSWG    ++G+ ++ R   N CGI  
Sbjct: 149  IYXSQTCSPDRLSHGVLAVGYGTQDGTDYWIVKNSWGTWWGEDGYIRMVRNRGNMCGIAS 208

Query: 1018 IA 1019
            +A
Sbjct: 209  LA 210


>gi|238816977|gb|ACR56863.1| cathepsin L-like cysteine proteinase [Delia coarctata]
          Length = 338

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 157/325 (48%), Gaps = 31/325 (9%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 701
           I E ++ F ++  + Y ++ E + R + F ++ HK  KH           + G ++++D 
Sbjct: 23  IKEEWQTFKMEHRKNYLSEVEERFRMKIFNENRHKIAKHNQLYAQGKVSFKLGLNKYADM 82

Query: 702 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP----VPDAWDWRKKNVTGPA 757
              E      FK +   Y   +    + ++    +    P    VP A DWR+       
Sbjct: 83  LHHE------FKETMNGYNHTMRKELRAQEGFNGITYISPANVQVPKAVDWRQHGAVTSV 136

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEY 815
            DQ  CGSCW+FS  G LEGQ+  K G LV  S+  LV+C+ +   +GC+G   + +  Y
Sbjct: 137 KDQGHCGSCWSFSSTGSLEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRY 196

Query: 816 TH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPL 873
                G+++EK YPY+   G    C ++K+ V    TG   +     E M K +   GP+
Sbjct: 197 IKDNGGVDTEKSYPYE---GIDDSCHFNKATVGATDTGFVDIPQGDEEAMMKAVATMGPV 253

Query: 874 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK-QDNIPYWLVRNSWGPIGPD 932
           +V +++        +    ND  CS  +L H VL+VGYG  +D   YWLV+NSWG    D
Sbjct: 254 AVAIDASNESFQLYSEGVYNDPNCSSDNLDHGVLVVGYGTDKDGQDYWLVKNSWGTTWGD 313

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+ K+ R  +N CGI   + + T+
Sbjct: 314 QGYIKMARNQDNQCGIATASSFPTV 338



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 156/326 (47%), Gaps = 32/326 (9%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 335
           I E ++ F ++  + Y ++ E + R + F ++ HK  KH           + G ++++D 
Sbjct: 23  IKEEWQTFKMEHRKNYLSEVEERFRMKIFNENRHKIAKHNQLYAQGKVSFKLGLNKYADM 82

Query: 336 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP----VPDAWDWRKKNVTGPA 391
              E      FK +   Y   +    + ++    +    P    VP A DWR+       
Sbjct: 83  LHHE------FKETMNGYNHTMRKELRAQEGFNGITYISPANVQVPKAVDWRQHGAVTSV 136

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIE 449
            DQ  CGSCW+FS  G LEGQ+  K G LV  S+  LV+C+ +  G  GC+G  ++    
Sbjct: 137 KDQGHCGSCWSFSSTGSLEGQHFRKAGVLVSLSEQNLVDCSTKY-GNNGCNGGLMDNAFR 195

Query: 450 YTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLYFNGSETMKKILYKYGP 507
           Y     G+++EK YPY    G    C ++K+ V    TG   +     E M K +   GP
Sbjct: 196 YIKDNGGVDTEKSYPYE---GIDDSCHFNKATVGATDTGFVDIPQGDEEAMMKAVATMGP 252

Query: 508 LSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGK-QDDIPYWLARNSWGPIGP 566
           ++V +++    F   +    ND  CS  +L H VL+VGYG  +D   YWL +NSWG    
Sbjct: 253 VAVAIDASNESFQLYSEGVYNDPNCSSDNLDHGVLVVGYGTDKDGQDYWLVKNSWGTTWG 312

Query: 567 DEGFFKIERG-NNACGIEQIAGYATI 591
           D+G+ K+ R  +N CGI   + + T+
Sbjct: 313 DQGYIKMARNQDNQCGIATASSFPTV 338



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 117/221 (52%), Gaps = 9/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           VP A DWR+        DQ  CGSCW+FS  G LEGQ+  K G LV  S+  LV+C+ + 
Sbjct: 121 VPKAVDWRQHGAVTSVKDQGHCGSCWSFSSTGSLEGQHFRKAGVLVSLSEQNLVDCSTKY 180

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHF 126
             +GC+G   + +  Y     G+++EK YPY+   G    C ++K+ V    TG   +  
Sbjct: 181 GNNGCNGGLMDNAFRYIKDNGGVDTEKSYPYE---GIDDSCHFNKATVGATDTGFVDIPQ 237

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK-QDN 185
              E M K +   GP++V +++        +    ND  CS  +L H VL+VGYG  +D 
Sbjct: 238 GDEEAMMKAVATMGPVAVAIDASNESFQLYSEGVYNDPNCSSDNLDHGVLVVGYGTDKDG 297

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWLV+NSWG    D+G+ K+ R  +N CGI   + + T+
Sbjct: 298 QDYWLVKNSWGTTWGDQGYIKMARNQDNQCGIATASSFPTV 338



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  I +G+    ++ +A    + V               V ND  CS  +L H VL+
Sbjct: 229  DTGFVDIPQGDEEAMMKAVATMGPVAVAIDASNESFQLYSEGVYNDPNCSSDNLDHGVLV 288

Query: 977  VGYGK-QDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            VGYG  +D   YWLV+NSWG    D+G+ K+ R  +N CGI   + + T+
Sbjct: 289  VGYGTDKDGQDYWLVKNSWGTTWGDQGYIKMARNQDNQCGIATASSFPTV 338


>gi|42564159|gb|AAS20591.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 326

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 147/311 (47%), Gaps = 23/311 (7%)

Query: 660 AFIVKRGRQYANDEEIKERFEYFKQDGHK------KHERYGTSEFSDRSPEEILCKTGFK 713
           AF    G+ Y +  E + RF  F+ +  K      K+++   S F   +P   L    FK
Sbjct: 25  AFKQTHGKTYKSLLEERTRFGIFQSNLRKIEEHNAKYDKGEESYFLGVTPFADLTHDEFK 84

Query: 714 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 773
              R   R +  +  VE  L    +   VPD+ DW +K        Q  CGSCWAFS  G
Sbjct: 85  DELR---RQIKTKPNVEATLAVFPEGLEVPDSIDWTQKGAVLDVKYQGGCGSCWAFSATG 141

Query: 774 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD---GCFFEPSIEYTHQAGLESEKDYPYK 830
            LEGQ AI     +  S+ QL++C+K     D   G     + +Y    G+E++  YPYK
Sbjct: 142 ALEGQNAIVNNVKIPLSEQQLLDCSKPYGNDDCEHGGLMSFAFDYVLDKGIEADSSYPYK 201

Query: 831 NANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPI 890
              G    C YD  K  L         N  E +KK +   GP+SV +++D I  Y G  +
Sbjct: 202 ---GIDTPCQYDAKKTVLKIKGYKNVSNSEEELKKAVGTVGPVSVAIDADPIQLYFGGIL 258

Query: 891 RKNDETCSPYDLGHAVLLVGYGKQDNI----PYWLVRNSWGPIGPDEGFFKIER-GNNAC 945
              D     ++L H VL VGYG++D++     +W V+NSWG    ++G+F+I+R  NN C
Sbjct: 259 ---DGLFCTHNLNHGVLAVGYGEEDHLFGKKKFWKVKNSWGKDWGEQGYFRIKRDANNLC 315

Query: 946 GIEQIAGYATI 956
           GI   A Y  +
Sbjct: 316 GIADKASYPIL 326



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 143/311 (45%), Gaps = 22/311 (7%)

Query: 294 AFIVKRGRQYANDEEIKERFEYFKQDGHK------KHERYGTSEFSDRSPEEILCKTGFK 347
           AF    G+ Y +  E + RF  F+ +  K      K+++   S F   +P   L    FK
Sbjct: 25  AFKQTHGKTYKSLLEERTRFGIFQSNLRKIEEHNAKYDKGEESYFLGVTPFADLTHDEFK 84

Query: 348 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 407
              R   R +  +  VE  L    +   VPD+ DW +K        Q  CGSCWAFS  G
Sbjct: 85  DELR---RQIKTKPNVEATLAVFPEGLEVPDSIDWTQKGAVLDVKYQGGCGSCWAFSATG 141

Query: 408 MLEGQYAIKTGKLVEFSKSQLVECAKQCSG--CGGCDGLEQPIEYTHQAGLESEKDYPYR 465
            LEGQ AI     +  S+ QL++C+K      C     +    +Y    G+E++  YPY+
Sbjct: 142 ALEGQNAIVNNVKIPLSEQQLLDCSKPYGNDDCEHGGLMSFAFDYVLDKGIEADSSYPYK 201

Query: 466 NGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPI 525
              G    C YD  K  L         N  E +KK +   GP+SV +++  I  Y G  +
Sbjct: 202 ---GIDTPCQYDAKKTVLKIKGYKNVSNSEEELKKAVGTVGPVSVAIDADPIQLYFGGIL 258

Query: 526 RKNDETCSPYDLGHAVLLVGYGKQDDI----PYWLARNSWGPIGPDEGFFKIER-GNNAC 580
              D     ++L H VL VGYG++D +     +W  +NSWG    ++G+F+I+R  NN C
Sbjct: 259 ---DGLFCTHNLNHGVLAVGYGEEDHLFGKKKFWKVKNSWGKDWGEQGYFRIKRDANNLC 315

Query: 581 GIEQIAGYATI 591
           GI   A Y  +
Sbjct: 316 GIADKASYPIL 326



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 114/223 (51%), Gaps = 14/223 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD+ DW +K        Q  CGSCWAFS  G LEGQ AI     +  S+ QL++C+K  
Sbjct: 110 VPDSIDWTQKGAVLDVKYQGGCGSCWAFSATGALEGQNAIVNNVKIPLSEQQLLDCSKPY 169

Query: 71  SGCD---GCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              D   G     + +Y    G+E++  YPYK   G    C YD  K  L         N
Sbjct: 170 GNDDCEHGGLMSFAFDYVLDKGIEADSSYPYK---GIDTPCQYDAKKTVLKIKGYKNVSN 226

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI- 186
             E +KK +   GP+SV +++D I  Y G  +   D     ++L H VL VGYG++D++ 
Sbjct: 227 SEEELKKAVGTVGPVSVAIDADPIQLYFGGIL---DGLFCTHNLNHGVLAVGYGEEDHLF 283

Query: 187 ---PYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
               +W V+NSWG    ++G+F+I+R  NN CGI   A Y  +
Sbjct: 284 GKKKFWKVKNSWGKDWGEQGYFRIKRDANNLCGIADKASYPIL 326



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 5/62 (8%)

Query: 968  YDLGHAVLLVGYGKQDDI----PYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYA 1022
            ++L H VL VGYG++D +     +W V+NSWG    ++G+F+I+R  NN CGI   A Y 
Sbjct: 265  HNLNHGVLAVGYGEEDHLFGKKKFWKVKNSWGKDWGEQGYFRIKRDANNLCGIADKASYP 324

Query: 1023 TI 1024
             +
Sbjct: 325  IL 326


>gi|405963298|gb|EKC28885.1| Cathepsin L [Crassostrea gigas]
          Length = 265

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 12/221 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD  DW K+    P  +Q  CGSCWAFS  G LEGQ+  KTGKLV  S+  L++C+K+ 
Sbjct: 51  LPDTVDWSKEGYVTPVKNQGQCGSCWAFSTTGGLEGQHYRKTGKLVSLSEQNLLDCSKEN 110

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 129
            GC+G   + + +Y  +  G+++E+ YPY    G+K  C++  S+V   T   F+     
Sbjct: 111 MGCNGGLPQKAYKYIKENGGIDTEESYPYL---GKKETCSFRPSEVGA-TCTGFVQVTAG 166

Query: 130 E--TMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           +   +KK +   GP++V +++       Y G     ++++C+P    HAVL+VGYG    
Sbjct: 167 DELALKKAVASVGPITVCIDASQPSFQLYKGGVY--DEQSCNPIVFDHAVLIVGYGVYQG 224

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWLV+NSWG     +G+  + R  NN CGI   A Y T+
Sbjct: 225 KDYWLVKNSWGTSWGMDGYIMMSRNQNNQCGIANHAVYPTV 265



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 12/221 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +PD  DW K+    P  +Q  CGSCWAFS  G LEGQ+  KTGKLV  S+  L++C+K+ 
Sbjct: 51  LPDTVDWSKEGYVTPVKNQGQCGSCWAFSTTGGLEGQHYRKTGKLVSLSEQNLLDCSKEN 110

Query: 802 SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
            GC+G   + + +Y  +  G+++E+ YPY    G+K  C++  S+V   T   F+     
Sbjct: 111 MGCNGGLPQKAYKYIKENGGIDTEESYPYL---GKKETCSFRPSEVGA-TCTGFVQVTAG 166

Query: 861 E--TMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
           +   +KK +   GP++V +++       Y G     ++++C+P    HAVL+VGYG    
Sbjct: 167 DELALKKAVASVGPITVCIDASQPSFQLYKGGVY--DEQSCNPIVFDHAVLIVGYGVYQG 224

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
             YWLV+NSWG     +G+  + R  NN CGI   A Y T+
Sbjct: 225 KDYWLVKNSWGTSWGMDGYIMMSRNQNNQCGIANHAVYPTV 265



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 121/221 (54%), Gaps = 11/221 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +PD  DW K+    P  +Q  CGSCWAFS  G LEGQ+  KTGKLV  S+  L++C+K+ 
Sbjct: 51  LPDTVDWSKEGYVTPVKNQGQCGSCWAFSTTGGLEGQHYRKTGKLVSLSEQNLLDCSKEN 110

Query: 436 SGCGGCDGLEQ-PIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN 493
            GC G  GL Q   +Y  +  G+++E+ YPY    G+K  C++  S+V   T   F+   
Sbjct: 111 MGCNG--GLPQKAYKYIKENGGIDTEESYPYL---GKKETCSFRPSEVGA-TCTGFVQVT 164

Query: 494 GSE--TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
             +   +KK +   GP++V +++    F        ++++C+P    HAVL+VGYG    
Sbjct: 165 AGDELALKKAVASVGPITVCIDASQPSFQLYKGGVYDEQSCNPIVFDHAVLIVGYGVYQG 224

Query: 552 IPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
             YWL +NSWG     +G+  + R  NN CGI   A Y T+
Sbjct: 225 KDYWLVKNSWGTSWGMDGYIMMSRNQNNQCGIANHAVYPTV 265



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V ++++C+P    HAVL+VGYG      YWLV+NSWG     +G+  + R  NN CGI  
Sbjct: 199  VYDEQSCNPIVFDHAVLIVGYGVYQGKDYWLVKNSWGTSWGMDGYIMMSRNQNNQCGIAN 258

Query: 1018 IAGYATI 1024
             A Y T+
Sbjct: 259  HAVYPTV 265


>gi|157864843|ref|XP_001681130.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124424|emb|CAJ02280.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 146/326 (44%), Gaps = 31/326 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 823
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GC G     + E+        + +
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           EK YPY +  G   +C+             ++    SE  M   L K GP+S+ +++   
Sbjct: 211 EKSYPYTSTFGYVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y+   +     +C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGKDWGEKGYVRVTMGV 326

Query: 943 NACGIEQIAGYATIDVVKNDETCSPY 968
           NAC    + GY     V   ++ +PY
Sbjct: 327 NAC---LLTGYPV--SVHVSQSPTPY 347



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 141/305 (46%), Gaps = 29/305 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLE 457
           WAFS  G +E Q+A+   KLV  S+ QLV C    +GCGG   L Q  E+        + 
Sbjct: 151 WAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLML-QAFEWVLRNMNGTVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLN-SH 515
           +EK YPY +  G   +C+             ++    SE  M   L K GP+S+ ++ S 
Sbjct: 210 TEKSYPYTSTFGYVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDASS 269

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER 575
            + +++G        +C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  
Sbjct: 270 FMSYHSGVLT-----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGKDWGEKGYVRVTM 324

Query: 576 GNNAC 580
           G NAC
Sbjct: 325 GVNAC 329



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 104/208 (50%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A+   KLV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185

Query: 71  SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + E+        + +EK YPY +  G   +C+             ++   
Sbjct: 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYTSTFGYVPECSNSSELAPGARIDGYVSME 245

Query: 128 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SE  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +
Sbjct: 246 SSERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGKDWGEKGYVRVTMGVNAC 329



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C    L H VLLVGY    ++PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 280  SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGKDWGEKGYVRVTMGVNAC 329


>gi|320169658|gb|EFW46557.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 324

 Score =  138 bits (348), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 93/300 (31%), Positives = 143/300 (47%), Gaps = 23/300 (7%)

Query: 298 KRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERI 356
           +RG   AN + I    E    +GH    +   ++F+D +  E   K  G ++      + 
Sbjct: 42  RRGIYRANLDFI----EKHNSEGHSY--KLAVNKFADLTYPEFAAKYLGLRFDATNATKS 95

Query: 357 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 416
            A    + +M+        +PD+ DWR   +  P  DQ  CGSCW+FS  G +EGQ+A K
Sbjct: 96  FAASTYLPRMV-------SLPDSVDWRTAGIVTPIKDQGQCGSCWSFSTTGSVEGQHARK 148

Query: 417 TGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEY-THQAGLESEKDYPYRNGNGEKFK 473
           TG+LV  S+  LV+C+    G  GC+G  ++Q  +Y     G+++E  YPY   +G    
Sbjct: 149 TGQLVSLSEQNLVDCS-SAQGNAGCNGGLMDQAFQYIISNNGIDTESSYPYTAQDG---T 204

Query: 474 CAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETC 532
           C ++ + V           +GSE+ ++  +   GP+SV +++    F   +    N+  C
Sbjct: 205 CQFNSANVGATVASYQDIASGSESDLQNAVATVGPISVAIDASQPSFQFYSSGVYNEPAC 264

Query: 533 SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
           S   L H VL VGYG      YWL +NSWG      G+  + R  NN CGI   A Y  +
Sbjct: 265 SSSQLDHGVLAVGYGTSGSSDYWLVKNSWGTSWGQSGYIWMTRNSNNQCGIATAASYPLV 324



 Score =  136 bits (342), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 92/299 (30%), Positives = 144/299 (48%), Gaps = 22/299 (7%)

Query: 664 KRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERI 722
           +RG   AN + I    E    +GH    +   ++F+D +  E   K  G ++      + 
Sbjct: 42  RRGIYRANLDFI----EKHNSEGHSY--KLAVNKFADLTYPEFAAKYLGLRFDATNATKS 95

Query: 723 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 782
            A    + +M+        +PD+ DWR   +  P  DQ  CGSCW+FS  G +EGQ+A K
Sbjct: 96  FAASTYLPRMV-------SLPDSVDWRTAGIVTPIKDQGQCGSCWSFSTTGSVEGQHARK 148

Query: 783 TGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKC 839
           TG+LV  S+  LV+C  A+  +GC+G   + + +Y     G+++E  YPY   +G    C
Sbjct: 149 TGQLVSLSEQNLVDCSSAQGNAGCNGGLMDQAFQYIISNNGIDTESSYPYTAQDG---TC 205

Query: 840 AYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 898
            ++ + V           +GSE+ ++  +   GP+SV +++        +    N+  CS
Sbjct: 206 QFNSANVGATVASYQDIASGSESDLQNAVATVGPISVAIDASQPSFQFYSSGVYNEPACS 265

Query: 899 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
              L H VL VGYG   +  YWLV+NSWG      G+  + R  NN CGI   A Y  +
Sbjct: 266 SSQLDHGVLAVGYGTSGSSDYWLVKNSWGTSWGQSGYIWMTRNSNNQCGIATAASYPLV 324



 Score =  136 bits (342), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 77/220 (35%), Positives = 115/220 (52%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 68
           +PD+ DWR   +  P  DQ  CGSCW+FS  G +EGQ+A KTG+LV  S+  LV+C  A+
Sbjct: 108 LPDSVDWRTAGIVTPIKDQGQCGSCWSFSTTGSVEGQHARKTGQLVSLSEQNLVDCSSAQ 167

Query: 69  QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
             +GC+G   + + +Y     G+++E  YPY   +G    C ++ + V           +
Sbjct: 168 GNAGCNGGLMDQAFQYIISNNGIDTESSYPYTAQDG---TCQFNSANVGATVASYQDIAS 224

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           GSE+ ++  +   GP+SV +++        +    N+  CS   L H VL VGYG   + 
Sbjct: 225 GSESDLQNAVATVGPISVAIDASQPSFQFYSSGVYNEPACSSSQLDHGVLAVGYGTSGSS 284

Query: 187 PYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
            YWLV+NSWG      G+  + R  NN CGI   A Y  +
Sbjct: 285 DYWLVKNSWGTSWGQSGYIWMTRNSNNQCGIATAASYPLV 324



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 1017
            V N+  CS   L H VL VGYG      YWLV+NSWG      G+  + R  NN CGI  
Sbjct: 258  VYNEPACSSSQLDHGVLAVGYGTSGSSDYWLVKNSWGTSWGQSGYIWMTRNSNNQCGIAT 317

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 318  AASYPLV 324


>gi|313220237|emb|CBY31096.1| unnamed protein product [Oikopleura dioica]
          Length = 371

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 163/324 (50%), Gaps = 36/324 (11%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF----KQDGHKKH-----ERYGTSEFSDRSPEEILC 708
           F+ F+++  + Y+ ++E   RF+ F    K+     H      +YG +EF+D S  E   
Sbjct: 50  FENFLLEHPKMYS-EQESHSRFQTFWENLKRIKFHNHIEQGSAKYGVTEFTDLSDFEFRR 108

Query: 709 K-TGFK-----WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
              G K      + + YER    R   +K+      D    + +DW +K       +Q  
Sbjct: 109 HYLGLKPELKNLNRKKYER--KSRNSSKKLKFAKTAD----ETFDWVEKGAVTEVKNQGM 162

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGL 821
           CGSCWAFS  G +EG +   TG L+  S+ +LV+C ++ SGC+G   + + E   +  GL
Sbjct: 163 CGSCWAFSTTGNIEGAWFKATGDLISLSEQELVDCDQKDSGCNGGLMDQAFEEVIRIGGL 222

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSETMKKILYKYGPLSVLLNSD 880
           E+E+ YPY   +G +  C ++KS  K+    DF+      E + + L ++GPLS+ +N+ 
Sbjct: 223 ETEQQYPY---DGVQETCNFEKSLSKVQI-DDFMDIGEDEEEIAEALEEHGPLSIAINAF 278

Query: 881 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI--------PYWLVRNSWGPIGPD 932
            +  Y G         CSP  L H VL+VGYG + +         PYW ++NSWGP   +
Sbjct: 279 GMQFYRGGVSHPLSFLCSPDGLDHGVLMVGYGVEHHTTWRHRHPRPYWKIKNSWGPRWGE 338

Query: 933 EGFFKIERGNNACGIEQIAGYATI 956
           +G++++ RG   CG+ ++   + +
Sbjct: 339 DGYYRVARGKGVCGVNKMVSTSIV 362



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 159/324 (49%), Gaps = 35/324 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF----KQDGHKKH-----ERYGTSEFSDRSPEEILC 342
           F+ F+++  + Y+ ++E   RF+ F    K+     H      +YG +EF+D S  E   
Sbjct: 50  FENFLLEHPKMYS-EQESHSRFQTFWENLKRIKFHNHIEQGSAKYGVTEFTDLSDFEFRR 108

Query: 343 K-TGFK-----WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
              G K      + + YER    R   +K+      D    + +DW +K       +Q  
Sbjct: 109 HYLGLKPELKNLNRKKYER--KSRNSSKKLKFAKTAD----ETFDWVEKGAVTEVKNQGM 162

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGL 456
           CGSCWAFS  G +EG +   TG L+  S+ +LV+C ++ SGC G    +   E     GL
Sbjct: 163 CGSCWAFSTTGNIEGAWFKATGDLISLSEQELVDCDQKDSGCNGGLMDQAFEEVIRIGGL 222

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN-GSETMKKILYKYGPLSVGLNSH 515
           E+E+ YPY   +G +  C ++KS  K+    DF+      E + + L ++GPLS+ +N+ 
Sbjct: 223 ETEQQYPY---DGVQETCNFEKSLSKVQI-DDFMDIGEDEEEIAEALEEHGPLSIAINAF 278

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI--------PYWLARNSWGPIGPD 567
            + FY G         CSP  L H VL+VGYG +           PYW  +NSWGP   +
Sbjct: 279 GMQFYRGGVSHPLSFLCSPDGLDHGVLMVGYGVEHHTTWRHRHPRPYWKIKNSWGPRWGE 338

Query: 568 EGFFKIERGNNACGIEQIAGYATI 591
           +G++++ RG   CG+ ++   + +
Sbjct: 339 DGYYRVARGKGVCGVNKMVSTSIV 362



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 122/223 (54%), Gaps = 14/223 (6%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           + +DW +K       +Q  CGSCWAFS  G +EG +   TG L+  S+ +LV+C ++ SG
Sbjct: 144 ETFDWVEKGAVTEVKNQGMCGSCWAFSTTGNIEGAWFKATGDLISLSEQELVDCDQKDSG 203

Query: 73  CDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSE 130
           C+G   + + E   +  GLE+E+ YPY   +G +  C ++KS  K+    DF+      E
Sbjct: 204 CNGGLMDQAFEEVIRIGGLETEQQYPY---DGVQETCNFEKSLSKVQI-DDFMDIGEDEE 259

Query: 131 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI---- 186
            + + L ++GPLS+ +N+  +  Y G         CSP  L H VL+VGYG + +     
Sbjct: 260 EIAEALEEHGPLSIAINAFGMQFYRGGVSHPLSFLCSPDGLDHGVLMVGYGVEHHTTWRH 319

Query: 187 ----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
               PYW ++NSWGP   ++G++++ RG   CG+ ++   + +
Sbjct: 320 RHPRPYWKIKNSWGPRWGEDGYYRVARGKGVCGVNKMVSTSIV 362



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 8/68 (11%)

Query: 965  CSPYDLGHAVLLVGYGKQDDI--------PYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            CSP  L H VL+VGYG +           PYW ++NSWGP   ++G++++ RG   CG+ 
Sbjct: 295  CSPDGLDHGVLMVGYGVEHHTTWRHRHPRPYWKIKNSWGPRWGEDGYYRVARGKGVCGVN 354

Query: 1017 QIAGYATI 1024
            ++   + +
Sbjct: 355  KMVSTSIV 362


>gi|313229615|emb|CBY18430.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 113/223 (50%), Gaps = 11/223 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P+P +WDWRK N   P  DQ  CGSCW FS  G +E   AI   +    S+ QLV+CA  
Sbjct: 104 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGA 163

Query: 70  CS--GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 126
            +  GC+G     + EY   A G+ +E DYPY   +G    C +D+ K  +         
Sbjct: 164 FNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG---NCVFDQKKAAVHVYGSVNIT 220

Query: 127 NGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            G E  M + +  Y P+S+      D +H  +GT   K D   SP D+ HAVL VG+G  
Sbjct: 221 RGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSSK-DCKGSPTDVNHAVLAVGFGTD 279

Query: 184 D-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
                +W V+NSW     ++G+F I+RG N CG+ Q   +A I
Sbjct: 280 GAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQCTSFALI 322



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 113/223 (50%), Gaps = 11/223 (4%)

Query: 741 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 800
           P+P +WDWRK N   P  DQ  CGSCW FS  G +E   AI   +    S+ QLV+CA  
Sbjct: 104 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGA 163

Query: 801 CS--GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
            +  GC+G     + EY   A G+ +E DYPY   +G    C +D+ K  +         
Sbjct: 164 FNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG---NCVFDQKKAAVHVYGSVNIT 220

Query: 858 NGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 914
            G E  M + +  Y P+S+      D +H  +GT   K D   SP D+ HAVL VG+G  
Sbjct: 221 RGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSSK-DCKGSPTDVNHAVLAVGFGTD 279

Query: 915 D-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
                +W V+NSW     ++G+F I+RG N CG+ Q   +A I
Sbjct: 280 GAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQCTSFALI 322



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 111/223 (49%), Gaps = 10/223 (4%)

Query: 375 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 434
           P+P +WDWRK N   P  DQ  CGSCW FS  G +E   AI   +    S+ QLV+CA  
Sbjct: 104 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGA 163

Query: 435 CSGCGGCDGL-EQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            +  G   GL  Q  EY   A G+ +E DYPY   +G    C +D+ K  +         
Sbjct: 164 FNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG---NCVFDQKKAAVHVYGSVNIT 220

Query: 493 NGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
            G E  M + +  Y P+S+        +H+ +GT   K D   SP D+ HAVL VG+G  
Sbjct: 221 RGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSSK-DCKGSPTDVNHAVLAVGFGTD 279

Query: 550 D-DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
                +W  +NSW     ++G+F I+RG N CG+ Q   +A I
Sbjct: 280 GAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQCTSFALI 322


>gi|328789602|ref|XP_623690.2| PREDICTED: cathepsin O-like [Apis mellifera]
          Length = 368

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 171/369 (46%), Gaps = 45/369 (12%)

Query: 611 VFLLCGVASCLCLPSLTDRITDQV-VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 669
           + L C    CL L      I   + V  +  LAI   +  DN   ++ F+ ++++  + Y
Sbjct: 3   LLLYCASELCLTLDMEWKTIVFTILVVSLCFLAIPIKVDPDNNEDIKLFQNYVIRYNKSY 62

Query: 670 AND-EEIKERFEYFKQD-----------GHKKHERYGTSEFSDRSPEEILCKT------- 710
            N+  E +ERF+ F++              ++   YG +EFSD S  E L  T       
Sbjct: 63  RNNPSEYEERFKRFQRSLQHIERMNGLRSSQESAYYGLTEFSDMSENEFLLHTLLPDLPI 122

Query: 711 -GFKWSERTYER---IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 766
            G K    +Y R   I  DR K         +   +P  +DWR K V  P   Q +CG+C
Sbjct: 123 RGEKHMNASYHRKHQISIDRMK---------RSISIPLRFDWRDKGVITPVRSQGSCGAC 173

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFFEPSIEYTHQAGLE 822
           WAFS   ++E  +AIK G L   S  ++++CAK     C G D C     +  +    L+
Sbjct: 174 WAFSTIEVIESMFAIKNGTLHSLSVQEMIDCAKNSNFGCEGGDICSLLSWLLISKVQILQ 233

Query: 823 SEKDYPYKNANGE-KFKCAYDKS---KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878
            E  YP     G  K     DK+   K++ FT   F+  +  + +   L  +GP++  +N
Sbjct: 234 -ESIYPLVGMTGTCKLGKMTDKTFNIKIQDFTCDSFV--DAEDELLIALATHGPVAAAVN 290

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           +    +Y G  I+ + +  S  +L HAV ++GY K   +P+++++NSWG    D+G+  I
Sbjct: 291 ALSWQNYLGGVIQYHCDG-SFNNLNHAVQIIGYDKSVAVPHYIIKNSWGSNFGDKGYMYI 349

Query: 939 ERGNNACGI 947
             GNN CGI
Sbjct: 350 GIGNNLCGI 358



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 170/370 (45%), Gaps = 46/370 (12%)

Query: 245 VFLLCGVASCLCLPSLTDRITDQV-VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 303
           + L C    CL L      I   + V  +  LAI   +  DN   ++ F+ ++++  + Y
Sbjct: 3   LLLYCASELCLTLDMEWKTIVFTILVVSLCFLAIPIKVDPDNNEDIKLFQNYVIRYNKSY 62

Query: 304 AND-EEIKERFEYFKQD-----------GHKKHERYGTSEFSDRSPEEILCKT------- 344
            N+  E +ERF+ F++              ++   YG +EFSD S  E L  T       
Sbjct: 63  RNNPSEYEERFKRFQRSLQHIERMNGLRSSQESAYYGLTEFSDMSENEFLLHTLLPDLPI 122

Query: 345 -GFKWSERTYER---IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 400
            G K    +Y R   I  DR K         +   +P  +DWR K V  P   Q +CG+C
Sbjct: 123 RGEKHMNASYHRKHQISIDRMK---------RSISIPLRFDWRDKGVITPVRSQGSCGAC 173

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-GCGG---CDGLEQPIEYTHQAGL 456
           WAFS   ++E  +AIK G L   S  ++++CAK  + GC G   C  L   +    +  +
Sbjct: 174 WAFSTIEVIESMFAIKNGTLHSLSVQEMIDCAKNSNFGCEGGDICSLLSWLL--ISKVQI 231

Query: 457 ESEKDYPYRNGNGE-KFKCAYDKS---KVKLFTGKDFLYFNGSETMKKILYKYGPLSVGL 512
             E  YP     G  K     DK+   K++ FT   F+  +  + +   L  +GP++  +
Sbjct: 232 LQESIYPLVGMTGTCKLGKMTDKTFNIKIQDFTCDSFV--DAEDELLIALATHGPVAAAV 289

Query: 513 NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFK 572
           N+     Y G  I+ + +  S  +L HAV ++GY K   +P+++ +NSWG    D+G+  
Sbjct: 290 NALSWQNYLGGVIQYHCDG-SFNNLNHAVQIIGYDKSVAVPHYIIKNSWGSNFGDKGYMY 348

Query: 573 IERGNNACGI 582
           I  GNN CGI
Sbjct: 349 IGIGNNLCGI 358



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
            +++   +P  +DWR K V  P   Q  CG+CWAFS   ++E  +AIK G L   S  ++
Sbjct: 142 RMKRSISIPLRFDWRDKGVITPVRSQGSCGACWAFSTIEVIESMFAIKNGTLHSLSVQEM 201

Query: 64  VECAKQ----CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDKS---KV 115
           ++CAK     C G D C     +  +    L+ E  YP     G  K     DK+   K+
Sbjct: 202 IDCAKNSNFGCEGGDICSLLSWLLISKVQILQ-ESIYPLVGMTGTCKLGKMTDKTFNIKI 260

Query: 116 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 175
           + FT   F+  +  + +   L  +GP++  +N+    +Y G  I+ + +  S  +L HAV
Sbjct: 261 QDFTCDSFV--DAEDELLIALATHGPVAAAVNALSWQNYLGGVIQYHCDG-SFNNLNHAV 317

Query: 176 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
            ++GY K   +P+++++NSWG    D+G+  I  GNN CGI
Sbjct: 318 QIIGYDKSVAVPHYIIKNSWGSNFGDKGYMYIGIGNNLCGI 358



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 32/47 (68%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            +L HAV ++GY K   +P+++++NSWG    D+G+  I  GNN CGI
Sbjct: 312  NLNHAVQIIGYDKSVAVPHYIIKNSWGSNFGDKGYMYIGIGNNLCGI 358


>gi|32394728|gb|AAM96000.1| cathepsin L precursor [Metapenaeus ensis]
          Length = 322

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 153/321 (47%), Gaps = 38/321 (11%)

Query: 292 FKAFIVKRGRQYANDEE------IKERFEYFKQDGHKKHER------YGTSEFSDRSPEE 339
           ++ F V+ GR Y    E      + E+ + F +D + K E          ++F D + EE
Sbjct: 19  WQDFKVQYGRHYGTAREDLYRQSVFEQNQQFIEDHNAKFENGEVTFTLKMNQFGDMTSEE 78

Query: 340 ILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
                 GF          V  R  V   ++E + D  +P   DWR K    P  DQ  CG
Sbjct: 79  FAATMNGF--------LNVPTRHPV--AILEAD-DETLPKHVDWRTKGAVTPVKDQKQCG 127

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYTHQ-AGL 456
           SCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +    G C GL +Q  +Y  +  G+
Sbjct: 128 SCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCSGKFGNMGCCGGLMDQAFKYIKENKGI 187

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLYFNGSETMKKILYKYGPLSVGLN-S 514
           ++E+ YPY   +G   KC +D S V    TG   +      ++ K +   GP+SV ++ S
Sbjct: 188 DTEESYPYEAQDG---KCRFDSSNVGATDTGFVDIAHGEENSLMKAVANIGPISVAIDAS 244

Query: 515 H--LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEGFF 571
           H     ++ G    K    CS   L H VL +GYG+ DD   YWL +NSW     D+GF 
Sbjct: 245 HPSFQFYHQGVYYEKE---CSSTMLDHGVLAIGYGETDDGKEYWLVKNSWNTSWGDKGFI 301

Query: 572 KIERG-NNACGIEQIAGYATI 591
           ++ R   N CGI   A Y  +
Sbjct: 302 QMSRNKKNNCGIASQASYPLV 322



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 153/322 (47%), Gaps = 41/322 (12%)

Query: 658 FKAFIVKRGRQYANDEE------IKERFEYFKQDGHKKHER------YGTSEFSDRSPEE 705
           ++ F V+ GR Y    E      + E+ + F +D + K E          ++F D + EE
Sbjct: 19  WQDFKVQYGRHYGTAREDLYRQSVFEQNQQFIEDHNAKFENGEVTFTLKMNQFGDMTSEE 78

Query: 706 ILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
                 GF          V  R  V   ++E + D  +P   DWR K    P  DQ  CG
Sbjct: 79  FAATMNGF--------LNVPTRHPV--AILEAD-DETLPKHVDWRTKGAVTPVKDQKQCG 127

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQ-AGL 821
           SCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +    GC G   + + +Y  +  G+
Sbjct: 128 SCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCSGKFGNMGCCGGLMDQAFKYIKENKGI 187

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE--TMKKILYKYGPLSVLLNS 879
           ++E+ YPY+  +G   KC +D S V   T   F+     E  ++ K +   GP+SV +++
Sbjct: 188 DTEESYPYEAQDG---KCRFDSSNVGA-TDTGFVDIAHGEENSLMKAVANIGPISVAIDA 243

Query: 880 ---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGF 935
                   + G    K    CS   L H VL +GYG+ D+   YWLV+NSW     D+GF
Sbjct: 244 SHPSFQFYHQGVYYEKE---CSSTMLDHGVLAIGYGETDDGKEYWLVKNSWNTSWGDKGF 300

Query: 936 FKIERG-NNACGIEQIAGYATI 956
            ++ R   N CGI   A Y  +
Sbjct: 301 IQMSRNKKNNCGIASQASYPLV 322



 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 118/228 (51%), Gaps = 17/228 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWR K    P  DQ  CGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+
Sbjct: 102 DETLPKHVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCS 161

Query: 68  KQCS--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
            +    GC G   + + +Y  +  G+++E+ YPY+  +G   KC +D S V   T   F+
Sbjct: 162 GKFGNMGCCGGLMDQAFKYIKENKGIDTEESYPYEAQDG---KCRFDSSNVGA-TDTGFV 217

Query: 125 HFNGSE--TMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
                E  ++ K +   GP+SV +++        + G    K    CS   L H VL +G
Sbjct: 218 DIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGVYYEKE---CSSTMLDHGVLAIG 274

Query: 180 YGKQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           YG+ D+   YWLV+NSW     D+GF ++ R   N CGI   A Y  +
Sbjct: 275 YGETDDGKEYWLVKNSWNTSWGDKGFIQMSRNKKNNCGIASQASYPLV 322



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  I  G     ++ +A    I V               V  ++ CS   L H VL 
Sbjct: 213  DTGFVDIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGVYYEKECSSTMLDHGVLA 272

Query: 977  VGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            +GYG+ DD   YWLV+NSW     D+GF ++ R   N CGI   A Y  +
Sbjct: 273  IGYGETDDGKEYWLVKNSWNTSWGDKGFIQMSRNKKNNCGIASQASYPLV 322


>gi|332375975|gb|AEE63128.1| unknown [Dendroctonus ponderosae]
          Length = 338

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 170/344 (49%), Gaps = 40/344 (11%)

Query: 274 TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY---- 327
           T+A+       +E + E + +F V+  +QY ++ E + R + F  + HK  KH +     
Sbjct: 9   TIAVACQAVSFSELVQEQWNSFKVQHKKQYESETEERFRMKIFMDNSHKVAKHNKLFEQG 68

Query: 328 ------GTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDA 379
                   +++ D    E +    GF  + +TY +    R +++  +  +E     +PD 
Sbjct: 69  LYPYKLAMNKYGDLLHHEFVGLLNGFNRT-KTYLK----RGELQDSITFIEPAHVDIPDT 123

Query: 380 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCG 439
            DWR++    P  DQ  CGSCW+FS  G LEGQ+  +T KLV  S+  LV+C+ +  G  
Sbjct: 124 VDWRQEGAVTPVKDQGHCGSCWSFSATGALEGQHFRQTKKLVSLSEQNLVDCSSRF-GNN 182

Query: 440 GCDG--LEQPIEYT-HQAGLESEKDYPYRNGNGEKFKC------AYDKSKVKLFTGKDFL 490
           GC+G  ++    Y  +  G+++E  YPY  G  EKF+       A DK  V + +G +  
Sbjct: 183 GCNGGLMDNAFRYIKNNGGIDTEAAYPYM-GEDEKFRYSAKNRGATDKGFVDIPSGDE-- 239

Query: 491 YFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                + +K  +   GP+S+ +++    F   +    +D TCS  +L H VL+VGYG  +
Sbjct: 240 -----DKLKAAVATVGPISIAIDASHESFQLYSNGVYSDPTCSSTELDHGVLVVGYGTDE 294

Query: 551 D--IPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
              + YWL +NSWG     +G+ K+ R  +N CG+   A Y  +
Sbjct: 295 KTGMDYWLVKNSWGDTWGLDGYIKMARNQDNQCGVATQASYPLV 338



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 175/344 (50%), Gaps = 41/344 (11%)

Query: 640 TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY---- 693
           T+A+       +E + E + +F V+  +QY ++ E + R + F  + HK  KH +     
Sbjct: 9   TIAVACQAVSFSELVQEQWNSFKVQHKKQYESETEERFRMKIFMDNSHKVAKHNKLFEQG 68

Query: 694 ------GTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDA 745
                   +++ D    E +    GF  + +TY +    R +++  +  +E     +PD 
Sbjct: 69  LYPYKLAMNKYGDLLHHEFVGLLNGFNRT-KTYLK----RGELQDSITFIEPAHVDIPDT 123

Query: 746 WDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SG 803
            DWR++    P  DQ  CGSCW+FS  G LEGQ+  +T KLV  S+  LV+C+ +   +G
Sbjct: 124 VDWRQEGAVTPVKDQGHCGSCWSFSATGALEGQHFRQTKKLVSLSEQNLVDCSSRFGNNG 183

Query: 804 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSE 861
           C+G   + +  Y  +  G+++E  YPY   + EKF+ +   +K +  T K F+   +G E
Sbjct: 184 CNGGLMDNAFRYIKNNGGIDTEAAYPYMGED-EKFRYS---AKNRGATDKGFVDIPSGDE 239

Query: 862 -TMKKILYKYGPLSVLLNSDLIHD-----YNGTPIRKNDETCSPYDLGHAVLLVGYG--K 913
             +K  +   GP+S+ +  D  H+      NG     +D TCS  +L H VL+VGYG  +
Sbjct: 240 DKLKAAVATVGPISIAI--DASHESFQLYSNGV---YSDPTCSSTELDHGVLVVGYGTDE 294

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +  + YWLV+NSWG     +G+ K+ R  +N CG+   A Y  +
Sbjct: 295 KTGMDYWLVKNSWGDTWGLDGYIKMARNQDNQCGVATQASYPLV 338



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 126/228 (55%), Gaps = 22/228 (9%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD  DWR++    P  DQ  CGSCW+FS  G LEGQ+  +T KLV  S+  LV+C+ + 
Sbjct: 120 IPDTVDWRQEGAVTPVKDQGHCGSCWSFSATGALEGQHFRQTKKLVSLSEQNLVDCSSRF 179

Query: 71  --SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + +  Y  +  G+++E  YPY   + EKF+ +   +K +  T K F+   
Sbjct: 180 GNNGCNGGLMDNAFRYIKNNGGIDTEAAYPYMGED-EKFRYS---AKNRGATDKGFVDIP 235

Query: 127 NGSE-TMKKILYKYGPLSVLLNSDLIHD-----YNGTPIRKNDETCSPYDLGHAVLLVGY 180
           +G E  +K  +   GP+S+ +  D  H+      NG     +D TCS  +L H VL+VGY
Sbjct: 236 SGDEDKLKAAVATVGPISIAI--DASHESFQLYSNGV---YSDPTCSSTELDHGVLVVGY 290

Query: 181 G--KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           G  ++  + YWLV+NSWG     +G+ K+ R  +N CG+   A Y  +
Sbjct: 291 GTDEKTGMDYWLVKNSWGDTWGLDGYIKMARNQDNQCGVATQASYPLV 338



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDD--IPYWLVRNSWGPIGPDEGFFKIERG-NNACGI 1015
            V +D TCS  +L H VL+VGYG  +   + YWLV+NSWG     +G+ K+ R  +N CG+
Sbjct: 270  VYSDPTCSSTELDHGVLVVGYGTDEKTGMDYWLVKNSWGDTWGLDGYIKMARNQDNQCGV 329

Query: 1016 EQIAGYATI 1024
               A Y  +
Sbjct: 330  ATQASYPLV 338


>gi|426345827|ref|XP_004040600.1| PREDICTED: cathepsin O [Gorilla gorilla gorilla]
          Length = 321

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 25/293 (8%)

Query: 664 KRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYER 721
            R R+ A   E   R  Y             YG ++FS   PEE          +  Y R
Sbjct: 36  SREREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSHLFPEEF---------KAIYLR 86

Query: 722 IVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQ 778
             +   K  +   EV    P   +P  +DWR K V     +Q  CG CWAFS+ G +E  
Sbjct: 87  --SKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESA 144

Query: 779 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG-- 834
           YAIK   L + S  Q+++C+    GC+G     ++ + +  Q  L  + +YP+K  NG  
Sbjct: 145 YAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLC 204

Query: 835 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 894
             F  ++    +K ++  DF   N  + M K L  +GPL V++++    DY G  I+ + 
Sbjct: 205 HYFSGSHSGFSIKGYSAHDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH- 261

Query: 895 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
             CS  +  HAVL+ G+ K  + PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 262 --CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K V     +Q  CG CWAFS+ G +E  YAIK   L + S  Q+++C+   
Sbjct: 108 LPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYNN 167

Query: 71  SGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHF 126
            GC+G     ++ + +  Q  L  + +YP+K  NG    F  ++    +K ++  DF   
Sbjct: 168 YGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAHDFS-- 225

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           N  + M K L  +GPL V++++    DY G  I+ +   CS  +  HAVL+ G+ K  + 
Sbjct: 226 NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGFDKTGST 282

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 283 PYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 134/294 (45%), Gaps = 26/294 (8%)

Query: 298 KRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYER 355
            R R+ A   E   R  Y             YG ++FS   PEE          +  Y R
Sbjct: 36  SREREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSHLFPEEF---------KAIYLR 86

Query: 356 IVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQ 412
             +   K  +   EV    P   +P  +DWR K V     +Q  CG CWAFS+ G +E  
Sbjct: 87  --SKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESA 144

Query: 413 YAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH--QAGLESEKDYPYRNGNG- 469
           YAIK   L + S  Q+++C+    GC G   L   + + +  Q  L  + +YP++  NG 
Sbjct: 145 YAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTL-NALNWLNKMQVKLVKDSEYPFKAQNGL 203

Query: 470 -EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKN 528
              F  ++    +K ++  DF   N  + M K L  +GPL V +++     Y G  I+ +
Sbjct: 204 CHYFSGSHSGFSIKGYSAHDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH 261

Query: 529 DETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
              CS  +  HAVL+ G+ K    PYW+ RNSWG     +G+  ++ G+N CGI
Sbjct: 262 ---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS  +  HAVL+ G+ K    PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 262  CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312


>gi|345307542|ref|XP_001510786.2| PREDICTED: cathepsin O-like [Ornithorhynchus anatinus]
          Length = 358

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 158/341 (46%), Gaps = 48/341 (14%)

Query: 620 CLCLPSLTDRITDQVVARVDTLAIEGS-LTFDNENILETFKAFIVKRGRQYANDEEIKER 678
           C+CL +    +T +  A V ++  + S +   N  ++E               +E +K  
Sbjct: 44  CICLGTTRKSVTREGCAPVRSVGKDISVMMLLNVRLIE---------------NESLKRH 88

Query: 679 FEYFKQDGH-KKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 737
                   H      YGT++FS   PEE               + +  R K  K+    E
Sbjct: 89  IRLNSLSLHDNTTAYYGTNQFSYLFPEEF--------------KAIYLRSKTSKLPRYSE 134

Query: 738 ------KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 791
                 K  P+P  +DWR K+V     +Q ACG CWAFSI G +E  YAI+   L E S 
Sbjct: 135 SEEMSIKPMPLPVRFDWRDKHVVTQVRNQEACGGCWAFSIVGEIESAYAIRGKPLEELSV 194

Query: 792 SQLVECAKQCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVK 847
            Q+++C+    GC G     ++ + +  Q  L  + +Y +K   G    F  ++    ++
Sbjct: 195 QQVIDCSYNNFGCSGGSTINALNWLNKTQVKLVRDAEYSFKAQTGICHYFSGSHYGISIR 254

Query: 848 LFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 906
            ++  D   F+G E  M K+L  +GPL+V++++    DY G  I+ +   CS  +  HAV
Sbjct: 255 GYSAYD---FSGQEDEMVKVLLSFGPLAVIVDAVSWQDYLGGIIQHH---CSSGEANHAV 308

Query: 907 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           L+ GY K  ++PYW+VRNSWG      G+  ++ G N CGI
Sbjct: 309 LITGYDKSGSVPYWIVRNSWGSSWGVNGYAHVKMGANICGI 349



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 116/215 (53%), Gaps = 11/215 (5%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           K  P+P  +DWR K+V     +Q  CG CWAFSI G +E  YAI+   L E S  Q+++C
Sbjct: 141 KPMPLPVRFDWRDKHVVTQVRNQEACGGCWAFSIVGEIESAYAIRGKPLEELSVQQVIDC 200

Query: 67  AKQCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKD 122
           +    GC G     ++ + +  Q  L  + +Y +K   G    F  ++    ++ ++  D
Sbjct: 201 SYNNFGCSGGSTINALNWLNKTQVKLVRDAEYSFKAQTGICHYFSGSHYGISIRGYSAYD 260

Query: 123 FLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
              F+G E  M K+L  +GPL+V++++    DY G  I+ +   CS  +  HAVL+ GY 
Sbjct: 261 ---FSGQEDEMVKVLLSFGPLAVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGYD 314

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           K  ++PYW+VRNSWG      G+  ++ G N CGI
Sbjct: 315 KSGSVPYWIVRNSWGSSWGVNGYAHVKMGANICGI 349



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 154/342 (45%), Gaps = 49/342 (14%)

Query: 254 CLCLPSLTDRITDQVVARVDTLAIEGS-LTFDNENILETFKAFIVKRGRQYANDEEIKER 312
           C+CL +    +T +  A V ++  + S +   N  ++E               +E +K  
Sbjct: 44  CICLGTTRKSVTREGCAPVRSVGKDISVMMLLNVRLIE---------------NESLKRH 88

Query: 313 FEYFKQDGH-KKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 371
                   H      YGT++FS   PEE               + +  R K  K+    E
Sbjct: 89  IRLNSLSLHDNTTAYYGTNQFSYLFPEEF--------------KAIYLRSKTSKLPRYSE 134

Query: 372 ------KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 425
                 K  P+P  +DWR K+V     +Q ACG CWAFSI G +E  YAI+   L E S 
Sbjct: 135 SEEMSIKPMPLPVRFDWRDKHVVTQVRNQEACGGCWAFSIVGEIESAYAIRGKPLEELSV 194

Query: 426 SQLVECAKQCSGCGGCDGLEQPIEYTH--QAGLESEKDYPYRNGNG--EKFKCAYDKSKV 481
            Q+++C+    GC G   +   + + +  Q  L  + +Y ++   G    F  ++    +
Sbjct: 195 QQVIDCSYNNFGCSGGSTI-NALNWLNKTQVKLVRDAEYSFKAQTGICHYFSGSHYGISI 253

Query: 482 KLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHA 540
           + ++  D   F+G E  M K+L  +GPL+V +++     Y G  I+ +   CS  +  HA
Sbjct: 254 RGYSAYD---FSGQEDEMVKVLLSFGPLAVIVDAVSWQDYLGGIIQHH---CSSGEANHA 307

Query: 541 VLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
           VL+ GY K   +PYW+ RNSWG      G+  ++ G N CGI
Sbjct: 308 VLITGYDKSGSVPYWIVRNSWGSSWGVNGYAHVKMGANICGI 349



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 31/51 (60%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS  +  HAVL+ GY K   +PYW+VRNSWG      G+  ++ G N CGI
Sbjct: 299  CSSGEANHAVLITGYDKSGSVPYWIVRNSWGSSWGVNGYAHVKMGANICGI 349


>gi|163914459|ref|NP_001106314.1| cathepsin K precursor [Xenopus laevis]
 gi|159155477|gb|AAI54985.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/268 (36%), Positives = 138/268 (51%), Gaps = 20/268 (7%)

Query: 330 SEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP--VPDAWDWRKKN 386
           ++  D + EE++   TG K         +  R K   +  E +K  P  VPD+ D+RKK 
Sbjct: 78  NQLGDMTSEEVVRTMTGLK---------IHKRNKPTNLTFEHDK-APEKVPDSIDYRKKG 127

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
              P  +Q +CGSCWAFS  G LEGQ   K GKLV  S   LV+C K+  GCGG   +  
Sbjct: 128 YVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVKKNDGCGG-GYMTN 186

Query: 447 PIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYK 504
             EY     G++SEK YPY    GE  +C Y+ S +     G   +     + +KK +  
Sbjct: 187 AFEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAAACKGYKEVQEGNEKALKKAVAL 243

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPI 564
            GP+SVG+++ L  F   +     D+ CS  D+ HAVL VGYG Q    YW+ +NSWG  
Sbjct: 244 VGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEE 303

Query: 565 GPDEGFFKIERGN-NACGIEQIAGYATI 591
             D+G+  + +   NACGI  +A Y  +
Sbjct: 304 WGDKGYILMAKDKGNACGIANLASYPVM 331



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 137/267 (51%), Gaps = 19/267 (7%)

Query: 696 SEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP--VPDAWDWRKKN 752
           ++  D + EE++   TG K         +  R K   +  E +K  P  VPD+ D+RKK 
Sbjct: 78  NQLGDMTSEEVVRTMTGLK---------IHKRNKPTNLTFEHDK-APEKVPDSIDYRKKG 127

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
              P  +Q +CGSCWAFS  G LEGQ   K GKLV  S   LV+C K+  GC G +   +
Sbjct: 128 YVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVKKNDGCGGGYMTNA 187

Query: 813 IEYTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKY 870
            EY     G++SEK YPY    GE  +C Y+ S +     G   +     + +KK +   
Sbjct: 188 FEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAAACKGYKEVQEGNEKALKKAVALV 244

Query: 871 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           GP+SV +++ L      +     D+ CS  D+ HAVL VGYG Q    YW+V+NSWG   
Sbjct: 245 GPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEEW 304

Query: 931 PDEGFFKIERGN-NACGIEQIAGYATI 956
            D+G+  + +   NACGI  +A Y  +
Sbjct: 305 GDKGYILMAKDKGNACGIANLASYPVM 331



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   K GKLV  S   LV+C K+ 
Sbjct: 117 VPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVKKN 176

Query: 71  SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 128
            GC G +   + EY     G++SEK YPY    GE  +C Y+ S +     G   +    
Sbjct: 177 DGCGGGYMTNAFEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAAACKGYKEVQEGN 233

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +KK +   GP+SV +++ L      +     D+ CS  D+ HAVL VGYG Q    Y
Sbjct: 234 EKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKY 293

Query: 189 WLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           W+V+NSWG    D+G+  + +   NACGI  +A Y  +
Sbjct: 294 WIVKNSWGEEWGDKGYILMAKDKGNACGIANLASYPVM 331



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAG 1020
            D+ CS  D+ HAVL VGYG Q    YW+V+NSWG    D+G+  + +   NACGI  +A 
Sbjct: 268  DKDCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEEWGDKGYILMAKDKGNACGIANLAS 327

Query: 1021 YATI 1024
            Y  +
Sbjct: 328  YPVM 331


>gi|410907221|ref|XP_003967090.1| PREDICTED: pro-cathepsin H-like [Takifugu rubripes]
          Length = 324

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 152/315 (48%), Gaps = 33/315 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERYGTS------EFSDRSPEEILCK 709
           F++++    + Y  D    +R + F ++  +  KH     S      ++SD +  E   +
Sbjct: 27  FRSWMALHNKAYVKD--FDQRLQVFTENKRRIDKHNEGNHSFAMRLNQYSDMTFAEF--R 82

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 768
             F W+E   +   A +         ++ + P P++ DWRKK N   P  +Q +CGSCW 
Sbjct: 83  KHFLWAEP--QNCSATKGSY------IQTNSPHPESIDWRKKGNYVTPVKNQGSCGSCWT 134

Query: 769 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEK 825
           FS  G LE   AI +GKLV  S+ QLV+CA+  +  GC+G     + EY  +  GL +E 
Sbjct: 135 FSTTGCLESVTAINSGKLVPLSEQQLVDCAQDFNNHGCNGGLPSQAFEYIKYNKGLMTES 194

Query: 826 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETMKKILYKYGPLSVL--LNSDL 881
           DYPY      + KC Y       F  K+ ++      + M+  +    P+S    +  D 
Sbjct: 195 DYPY---TAFEDKCTYKPELAAAFV-KNVVNITAYDEKEMEDAVATRNPVSFAFEVTPDF 250

Query: 882 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
           +H  +G        T +   + HAVL VGYG ++  PYW+V+NSWGP    +G+F I RG
Sbjct: 251 MHYSSGVYSSSTCHTTTD-KVNHAVLAVGYGSENGTPYWIVKNSWGPGWGQDGYFLIMRG 309

Query: 942 NNACGIEQIAGYATI 956
            N CG+   + +  +
Sbjct: 310 KNMCGLAACSSFPEV 324



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 119/229 (51%), Gaps = 13/229 (5%)

Query: 5   VEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
           ++ + P P++ DWRKK N   P  +Q  CGSCW FS  G LE   AI +GKLV  S+ QL
Sbjct: 101 IQTNSPHPESIDWRKKGNYVTPVKNQGSCGSCWTFSTTGCLESVTAINSGKLVPLSEQQL 160

Query: 64  VECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
           V+CA+  +  GC+G     + EY  +  GL +E DYPY      + KC Y       F  
Sbjct: 161 VDCAQDFNNHGCNGGLPSQAFEYIKYNKGLMTESDYPY---TAFEDKCTYKPELAAAFV- 216

Query: 121 KDFLHFNG--SETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 176
           K+ ++      + M+  +    P+S    +  D +H  +G        T +   + HAVL
Sbjct: 217 KNVVNITAYDEKEMEDAVATRNPVSFAFEVTPDFMHYSSGVYSSSTCHTTTD-KVNHAVL 275

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            VGYG ++  PYW+V+NSWGP    +G+F I RG N CG+   + +  +
Sbjct: 276 AVGYGSENGTPYWIVKNSWGPGWGQDGYFLIMRGKNMCGLAACSSFPEV 324



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 149/315 (47%), Gaps = 32/315 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERYGTS------EFSDRSPEEILCK 343
           F++++    + Y  D    +R + F ++  +  KH     S      ++SD +  E   +
Sbjct: 27  FRSWMALHNKAYVKD--FDQRLQVFTENKRRIDKHNEGNHSFAMRLNQYSDMTFAEF--R 82

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 402
             F W+E   +   A +         ++ + P P++ DWRKK N   P  +Q +CGSCW 
Sbjct: 83  KHFLWAEP--QNCSATKGSY------IQTNSPHPESIDWRKKGNYVTPVKNQGSCGSCWT 134

Query: 403 FSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYT-HQAGLESEK 460
           FS  G LE   AI +GKLV  S+ QLV+CA+  +  G   GL  Q  EY  +  GL +E 
Sbjct: 135 FSTTGCLESVTAINSGKLVPLSEQQLVDCAQDFNNHGCNGGLPSQAFEYIKYNKGLMTES 194

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG--SETMKKILYKYGPLSVG--LNSHL 516
           DYPY      + KC Y       F  K+ +       + M+  +    P+S    +    
Sbjct: 195 DYPY---TAFEDKCTYKPELAAAFV-KNVVNITAYDEKEMEDAVATRNPVSFAFEVTPDF 250

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
           +H+ +G        T +   + HAVL VGYG ++  PYW+ +NSWGP    +G+F I RG
Sbjct: 251 MHYSSGVYSSSTCHTTTD-KVNHAVLAVGYGSENGTPYWIVKNSWGPGWGQDGYFLIMRG 309

Query: 577 NNACGIEQIAGYATI 591
            N CG+   + +  +
Sbjct: 310 KNMCGLAACSSFPEV 324



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            + HAVL VGYG ++  PYW+V+NSWGP    +G+F I RG N CG+   + +  +
Sbjct: 270  VNHAVLAVGYGSENGTPYWIVKNSWGPGWGQDGYFLIMRGKNMCGLAACSSFPEV 324


>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis]
 gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis]
          Length = 341

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 161/331 (48%), Gaps = 37/331 (11%)

Query: 646 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD----------GHKKHERYGT 695
           S +  +  + E  + ++VK GR Y ++ E + RFE F+ +          G++ + +   
Sbjct: 26  SRSLHDAAMNERHEMWMVKYGRVYKDNSEKERRFEIFRNNVEFIESFNKPGNRPY-KLDI 84

Query: 696 SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 755
           +EF+D + EE      FK S   Y+R  ++    EK          VP + DWR+K    
Sbjct: 85  NEFADLTNEE------FKASRNGYKR-SSNVGLSEKSSFRYGNVTAVPTSMDWRQKGAVT 137

Query: 756 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSI 813
           P  DQ  CG CWAFS    +EG   + TGKL+  S+ +LV+C  + +  GC+G   + + 
Sbjct: 138 PIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDTSGEDQGCEGGLMDDAF 197

Query: 814 EYTHQ-AGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKY 870
           E+  Q  GL +E +YPY+  +G     K   D +K+   TG + +  N  + + K +   
Sbjct: 198 EFIKQNGGLTTEANYPYQGTDGTCNTNKAGNDAAKI---TGYEDVPANSEDALLKAVASQ 254

Query: 871 GPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
            P+SV +++       Y+G     +  T    +L H V  VGYG  D   YWLV+NSWG 
Sbjct: 255 -PVSVAIDASGSAFQFYSGGVFTGDCGT----ELDHGVTAVGYGTSDGTKYWLVKNSWGT 309

Query: 929 IGPDEGFFKIERGNNA----CGIEQIAGYAT 955
              ++G+ ++ER   A    CGI   + Y T
Sbjct: 310 SWGEDGYIRMERDIEAKEGLCGIAMQSSYPT 340



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 159/332 (47%), Gaps = 38/332 (11%)

Query: 280 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD----------GHKKHERYGT 329
           S +  +  + E  + ++VK GR Y ++ E + RFE F+ +          G++ + +   
Sbjct: 26  SRSLHDAAMNERHEMWMVKYGRVYKDNSEKERRFEIFRNNVEFIESFNKPGNRPY-KLDI 84

Query: 330 SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 389
           +EF+D + EE      FK S   Y+R  ++    EK          VP + DWR+K    
Sbjct: 85  NEFADLTNEE------FKASRNGYKR-SSNVGLSEKSSFRYGNVTAVPTSMDWRQKGAVT 137

Query: 390 PAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQP 447
           P  DQ  CG CWAFS    +EG   + TGKL+  S+ +LV+C        GC+G  ++  
Sbjct: 138 PIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDTSGED-QGCEGGLMDDA 196

Query: 448 IEYTHQ-AGLESEKDYPYRNGNG--EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYK 504
            E+  Q  GL +E +YPY+  +G     K   D +K+   TG + +  N  + + K +  
Sbjct: 197 FEFIKQNGGLTTEANYPYQGTDGTCNTNKAGNDAAKI---TGYEDVPANSEDALLKAVAS 253

Query: 505 YGPLSVGLNS--HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWG 562
             P+SV +++      FY+G     +  T    +L H V  VGYG  D   YWL +NSWG
Sbjct: 254 Q-PVSVAIDASGSAFQFYSGGVFTGDCGT----ELDHGVTAVGYGTSDGTKYWLVKNSWG 308

Query: 563 PIGPDEGFFKIERGNNA----CGIEQIAGYAT 590
               ++G+ ++ER   A    CGI   + Y T
Sbjct: 309 TSWGEDGYIRMERDIEAKEGLCGIAMQSSYPT 340



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 115/225 (51%), Gaps = 19/225 (8%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 68
           VP + DWR+K    P  DQ  CG CWAFS    +EG   + TGKL+  S+ +LV+C  + 
Sbjct: 124 VPTSMDWRQKGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDTSG 183

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLH 125
           +  GC+G   + + E+  Q  GL +E +YPY+  +G     K   D +K+   TG + + 
Sbjct: 184 EDQGCEGGLMDDAFEFIKQNGGLTTEANYPYQGTDGTCNTNKAGNDAAKI---TGYEDVP 240

Query: 126 FNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
            N  + + K +    P+SV +++       Y+G     +  T    +L H V  VGYG  
Sbjct: 241 ANSEDALLKAVASQ-PVSVAIDASGSAFQFYSGGVFTGDCGT----ELDHGVTAVGYGTS 295

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYAT 224
           D   YWLV+NSWG    ++G+ ++ER   A    CGI   + Y T
Sbjct: 296 DGTKYWLVKNSWGTSWGEDGYIRMERDIEAKEGLCGIAMQSSYPT 340



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYAT 1023
            +L H V  VGYG  D   YWLV+NSWG    ++G+ ++ER   A    CGI   + Y T
Sbjct: 282  ELDHGVTAVGYGTSDGTKYWLVKNSWGTSWGEDGYIRMERDIEAKEGLCGIAMQSSYPT 340


>gi|449683741|ref|XP_002155462.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/224 (39%), Positives = 120/224 (53%), Gaps = 16/224 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 68
            PD+ DWR +    P  DQ  CGSCWAFS  G LEGQ   KTGKLV  S+  LV+C  A 
Sbjct: 108 APDSVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQNFKKTGKLVSLSEQNLVDCSTAY 167

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + +  Y  +  G++SE  YPY   +G   KCA+ K  V   T   F+   
Sbjct: 168 GNNGCNGGLMDNAFTYIKENNGIDSEASYPYTAKDG---KCAFTKPNVAA-TDTGFVDIP 223

Query: 127 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRK---NDETCSPYDLGHAVLLVGYGK 182
           +G E  +K+ +   GP+SV +  D  H ++    RK   N+  CS  +L H VL+VGYG 
Sbjct: 224 SGDENKLKEAVASVGPISVAI--DASH-FSFQFYRKGVYNERKCSSTELDHGVLVVGYGT 280

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           +    YWLV+NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 281 ESGKDYWLVKNSWNTSWGDKGYIKMSRNAKNQCGIATNASYPLV 324



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/224 (39%), Positives = 120/224 (53%), Gaps = 16/224 (7%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 799
            PD+ DWR +    P  DQ  CGSCWAFS  G LEGQ   KTGKLV  S+  LV+C  A 
Sbjct: 108 APDSVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQNFKKTGKLVSLSEQNLVDCSTAY 167

Query: 800 QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 857
             +GC+G   + +  Y  +  G++SE  YPY   +G   KCA+ K  V   T   F+   
Sbjct: 168 GNNGCNGGLMDNAFTYIKENNGIDSEASYPYTAKDG---KCAFTKPNVAA-TDTGFVDIP 223

Query: 858 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRK---NDETCSPYDLGHAVLLVGYGK 913
           +G E  +K+ +   GP+SV +  D  H ++    RK   N+  CS  +L H VL+VGYG 
Sbjct: 224 SGDENKLKEAVASVGPISVAI--DASH-FSFQFYRKGVYNERKCSSTELDHGVLVVGYGT 280

Query: 914 QDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
           +    YWLV+NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 281 ESGKDYWLVKNSWNTSWGDKGYIKMSRNAKNQCGIATNASYPLV 324



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 116/222 (52%), Gaps = 11/222 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            PD+ DWR +    P  DQ  CGSCWAFS  G LEGQ   KTGKLV  S+  LV+C+   
Sbjct: 108 APDSVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQNFKKTGKLVSLSEQNLVDCS-TA 166

Query: 436 SGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            G  GC+G  ++    Y  +  G++SE  YPY   +G   KCA+ K  V   T   F+  
Sbjct: 167 YGNNGCNGGLMDNAFTYIKENNGIDSEASYPYTAKDG---KCAFTKPNVAA-TDTGFVDI 222

Query: 493 -NGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
            +G E  +K+ +   GP+SV +++    F        N+  CS  +L H VL+VGYG + 
Sbjct: 223 PSGDENKLKEAVASVGPISVAIDASHFSFQFYRKGVYNERKCSSTELDHGVLVVGYGTES 282

Query: 551 DIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
              YWL +NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 283 GKDYWLVKNSWNTSWGDKGYIKMSRNAKNQCGIATNASYPLV 324



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 16/109 (14%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  I  G+     E +A    I V               V N+  CS  +L H VL+
Sbjct: 216  DTGFVDIPSGDENKLKEAVASVGPISVAIDASHFSFQFYRKGVYNERKCSSTELDHGVLV 275

Query: 977  VGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 1024
            VGYG +    YWLV+NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 276  VGYGTESGKDYWLVKNSWNTSWGDKGYIKMSRNAKNQCGIATNASYPLV 324


>gi|221090861|ref|XP_002167224.1| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 117/221 (52%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 68
            PD  DWR +    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C  A 
Sbjct: 108 APDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSTAY 167

Query: 69  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + +  Y  +  G++SE  YPY   +G   KC + K  V   T   F+   
Sbjct: 168 GNNGCNGGLMDNAFTYIKENKGIDSEASYPYTAEDG---KCVFKKPSVAA-TDTGFVDLP 223

Query: 127 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            G+E  +K+ +   GP+SV +++        +    N+ +CS  +L H VL+VGYG +  
Sbjct: 224 EGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCSSTELDHGVLVVGYGTESG 283

Query: 186 IPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
             YWLV+NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 284 KDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKASYPLV 324



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 117/221 (52%), Gaps = 10/221 (4%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AK 799
            PD  DWR +    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C  A 
Sbjct: 108 APDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSTAY 167

Query: 800 QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 857
             +GC+G   + +  Y  +  G++SE  YPY   +G   KC + K  V   T   F+   
Sbjct: 168 GNNGCNGGLMDNAFTYIKENKGIDSEASYPYTAEDG---KCVFKKPSVAA-TDTGFVDLP 223

Query: 858 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
            G+E  +K+ +   GP+SV +++        +    N+ +CS  +L H VL+VGYG +  
Sbjct: 224 EGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCSSTELDHGVLVVGYGTESG 283

Query: 917 IPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
             YWLV+NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 284 KDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKASYPLV 324



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 114/221 (51%), Gaps = 9/221 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
            PD  DWR +    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+   
Sbjct: 108 APDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCS-TA 166

Query: 436 SGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLY 491
            G  GC+G  ++    Y  +  G++SE  YPY   +G   KC + K  V    TG   L 
Sbjct: 167 YGNNGCNGGLMDNAFTYIKENKGIDSEASYPYTAEDG---KCVFKKPSVAATDTGFVDLP 223

Query: 492 FNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
                 +K+ +   GP+SV +++    F   +    N+ +CS  +L H VL+VGYG +  
Sbjct: 224 EGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCSSTELDHGVLVVGYGTESG 283

Query: 552 IPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
             YWL +NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 284 KDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKASYPLV 324



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 16/109 (14%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  +  GN     E +A    I V               V N+ +CS  +L H VL+
Sbjct: 216  DTGFVDLPEGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCSSTELDHGVLV 275

Query: 977  VGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 1024
            VGYG +    YWLV+NSW     D+G+ K+ R   N CGI   A Y  +
Sbjct: 276  VGYGTESGKDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKASYPLV 324


>gi|225706086|gb|ACO08889.1| Cathepsin S precursor [Osmerus mordax]
          Length = 333

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 128/259 (49%), Gaps = 17/259 (6%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G +   D + EEIL             ++ AD ++ E          PVPD  DWR+K  
Sbjct: 78  GMNHMGDMTEEEIL-------QSFASLKVPADLKR-EPSAFVASSGTPVPDTVDWRQKGY 129

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEP 811
                +Q +CGSCWAFS  G LEGQ    TGKL++ S   LV+C+ +    GC+G F   
Sbjct: 130 VTQVKNQGSCGSCWAFSSVGALEGQLMRTTGKLLDLSPQNLVDCSSKYGNKGCNGGFMSE 189

Query: 812 SIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYK 869
           + +Y     G++S+  YPY+   G    C Y+ S +    T   FL      T+K+ +  
Sbjct: 190 AFQYVIDNKGIDSDTSYPYQGVQG---TCHYNPSYRSANCTRYSFLPEGDETTLKQAVAM 246

Query: 870 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 929
            GP+SV +++             ND TC+   + HAVL+VGYG  D   YWLV+NSWG  
Sbjct: 247 IGPISVAIDATRPSFILWRSGVYNDLTCTQ-KINHAVLVVGYGTLDGQDYWLVKNSWGTR 305

Query: 930 GPDEGFFKIERG-NNACGI 947
             + G+ ++ R  NN CGI
Sbjct: 306 FGENGYIRMSRNRNNQCGI 324



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 112/212 (52%), Gaps = 9/212 (4%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           PVPD  DWR+K       +Q  CGSCWAFS  G LEGQ    TGKL++ S   LV+C+ +
Sbjct: 117 PVPDTVDWRQKGYVTQVKNQGSCGSCWAFSSVGALEGQLMRTTGKLLDLSPQNLVDCSSK 176

Query: 70  CS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
               GC+G F   + +Y     G++S+  YPY+   G    C Y+ S +    T   FL 
Sbjct: 177 YGNKGCNGGFMSEAFQYVIDNKGIDSDTSYPYQGVQG---TCHYNPSYRSANCTRYSFLP 233

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
                T+K+ +   GP+SV +++             ND TC+   + HAVL+VGYG  D 
Sbjct: 234 EGDETTLKQAVAMIGPISVAIDATRPSFILWRSGVYNDLTCTQ-KINHAVLVVGYGTLDG 292

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGI 216
             YWLV+NSWG    + G+ ++ R  NN CGI
Sbjct: 293 QDYWLVKNSWGTRFGENGYIRMSRNRNNQCGI 324



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 130/260 (50%), Gaps = 18/260 (6%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G +   D + EEIL             ++ AD ++ E          PVPD  DWR+K  
Sbjct: 78  GMNHMGDMTEEEIL-------QSFASLKVPADLKR-EPSAFVASSGTPVPDTVDWRQKGY 129

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LE 445
                +Q +CGSCWAFS  G LEGQ    TGKL++ S   LV+C+ +  G  GC+G  + 
Sbjct: 130 VTQVKNQGSCGSCWAFSSVGALEGQLMRTTGKLLDLSPQNLVDCSSK-YGNKGCNGGFMS 188

Query: 446 QPIEYT-HQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILY 503
           +  +Y     G++S+  YPY+   G +  C Y+ S +    T   FL      T+K+ + 
Sbjct: 189 EAFQYVIDNKGIDSDTSYPYQ---GVQGTCHYNPSYRSANCTRYSFLPEGDETTLKQAVA 245

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GP+SV +++    F        ND TC+   + HAVL+VGYG  D   YWL +NSWG 
Sbjct: 246 MIGPISVAIDATRPSFILWRSGVYNDLTCTQ-KINHAVLVVGYGTLDGQDYWLVKNSWGT 304

Query: 564 IGPDEGFFKIERG-NNACGI 582
              + G+ ++ R  NN CGI
Sbjct: 305 RFGENGYIRMSRNRNNQCGI 324



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 2/58 (3%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGI 1015
            V ND TC+   + HAVL+VGYG  D   YWLV+NSWG    + G+ ++ R  NN CGI
Sbjct: 268  VYNDLTCTQ-KINHAVLVVGYGTLDGQDYWLVKNSWGTRFGENGYIRMSRNRNNQCGI 324


>gi|62510452|sp|Q8HY81.1|CATS_CANFA RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497538|gb|AAO13009.1| cathepsin S preproprotein [Canis lupus familiaris]
          Length = 331

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 131/269 (48%), Gaps = 19/269 (7%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G +   D + EE++   G       ++R V  R    + L         PD+ DWR+K  
Sbjct: 76  GMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSNQKL---------PDSVDWREKGC 126

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFE 810
                 Q +CG+CWAFS  G LE Q  +KTGKLV  S   LV+C+ +     GC+G F  
Sbjct: 127 VTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMT 186

Query: 811 PSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK-DFLHFNGSETMKKILY 868
            + +Y     G++SE  YPYK  NG   KC YD  K      K   L F   + +K+ + 
Sbjct: 187 TAFQYIIDNNGIDSEASYPYKAMNG---KCRYDSKKRAATCSKYTELPFGSEDALKEAVA 243

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
             GP+SV +++     +        + +C+  ++ H VL+VGYG  +   YWLV+NSWG 
Sbjct: 244 NKGPVSVAIDASHYSFFLYRSGVYYEPSCTQ-NVNHGVLVVGYGNLNGKDYWLVKNSWGL 302

Query: 929 IGPDEGFFKIERGN-NACGIEQIAGYATI 956
              D+G+ ++ R + N CGI     Y  I
Sbjct: 303 NFGDQGYIRMARNSGNHCGIASYPSYPEI 331



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 131/269 (48%), Gaps = 18/269 (6%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G +   D + EE++   G       ++R V  R    + L         PD+ DWR+K  
Sbjct: 76  GMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSNQKL---------PDSVDWREKGC 126

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LE 445
                 Q +CG+CWAFS  G LE Q  +KTGKLV  S   LV+C+ +  G  GC+G  + 
Sbjct: 127 VTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMT 186

Query: 446 QPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGK-DFLYFNGSETMKKILY 503
              +Y     G++SE  YPY+  NG   KC YD  K      K   L F   + +K+ + 
Sbjct: 187 TAFQYIIDNNGIDSEASYPYKAMNG---KCRYDSKKRAATCSKYTELPFGSEDALKEAVA 243

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GP+SV +++    F+        + +C+  ++ H VL+VGYG  +   YWL +NSWG 
Sbjct: 244 NKGPVSVAIDASHYSFFLYRSGVYYEPSCTQ-NVNHGVLVVGYGNLNGKDYWLVKNSWGL 302

Query: 564 IGPDEGFFKIERGN-NACGIEQIAGYATI 591
              D+G+ ++ R + N CGI     Y  I
Sbjct: 303 NFGDQGYIRMARNSGNHCGIASYPSYPEI 331



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 115/221 (52%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD+ DWR+K        Q  CG+CWAFS  G LE Q  +KTGKLV  S   LV+C+ + 
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 70  --CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK-DFLH 125
               GC+G F   + +Y     G++SE  YPYK  NG   KC YD  K      K   L 
Sbjct: 175 YGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNG---KCRYDSKKRAATCSKYTELP 231

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           F   + +K+ +   GP+SV +++     +        + +C+  ++ H VL+VGYG  + 
Sbjct: 232 FGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQ-NVNHGVLVVGYGNLNG 290

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 291 KDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSYPEI 331



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
            ++ H VL+VGYG  +   YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 275  NVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSYPEI 331


>gi|121531598|gb|ABM55484.1| digestive cysteine protease intestain [Leptinotarsa decemlineata]
          Length = 326

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 147/318 (46%), Gaps = 36/318 (11%)

Query: 294 AFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---RY---------GTSEFSDRSPEEIL 341
           AF    G+ Y N  E K RF  F+++  K  E   RY         G + F+D + EE  
Sbjct: 25  AFKQTHGKTYKNLLEEKTRFGIFQRNLIKIKEHNARYDKGEETYLLGVTRFADLTHEEF- 83

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
                   +   +  + ++ ++        +D  VPD+ DW +K       DQ  CGSCW
Sbjct: 84  --------KDILKGQIKNKPRLNATPTVFPEDLEVPDSIDWTEKGAVLEVKDQNPCGSCW 135

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCD---GLEQPIEYTHQAGLES 458
           AFS  G L+GQ AI     +  S+ QL++C+    G G C     +    +Y    G++S
Sbjct: 136 AFSATGALKGQNAILNNVKISLSEQQLLDCS-AAYGNGNCKEGGDMSAAFDYVRDYGIQS 194

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           EK YPY     E   C YD SK  L            E ++K +   GP+S+ +NS  + 
Sbjct: 195 EKSYPYIRKQTE---CQYDASKTILKIKGYKNVTTSEEGLRKAVGTIGPISIAMNSDPLQ 251

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD----DIPYWLARNSWGPIGPDEGFFKIE 574
            Y    I  + + CS +DL H VL+VGYGK      +  +W  +NSWG I  + G+F+I+
Sbjct: 252 LYYSGTI--SGKGCS-HDLDHGVLVVGYGKASQWSGETKFWRVKNSWGKIWGENGYFRIK 308

Query: 575 R-GNNACGIEQIAGYATI 591
           R  NN CGI     Y  +
Sbjct: 309 RDANNLCGIADDPTYPVL 326



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 152/318 (47%), Gaps = 37/318 (11%)

Query: 660 AFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---RY---------GTSEFSDRSPEEIL 707
           AF    G+ Y N  E K RF  F+++  K  E   RY         G + F+D + EE  
Sbjct: 25  AFKQTHGKTYKNLLEEKTRFGIFQRNLIKIKEHNARYDKGEETYLLGVTRFADLTHEEF- 83

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
                   +   +  + ++ ++        +D  VPD+ DW +K       DQ  CGSCW
Sbjct: 84  --------KDILKGQIKNKPRLNATPTVFPEDLEVPDSIDWTEKGAVLEVKDQNPCGSCW 135

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGC-DGCFFEPSIEYTHQAGLESE 824
           AFS  G L+GQ AI     +  S+ QL++C  A     C +G     + +Y    G++SE
Sbjct: 136 AFSATGALKGQNAILNNVKISLSEQQLLDCSAAYGNGNCKEGGDMSAAFDYVRDYGIQSE 195

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIH 883
           K YPY     E   C YD SK  +   K + +   SE  ++K +   GP+S+ +NSD + 
Sbjct: 196 KSYPYIRKQTE---CQYDASKT-ILKIKGYKNVTTSEEGLRKAVGTIGPISIAMNSDPLQ 251

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN----IPYWLVRNSWGPIGPDEGFFKIE 939
            Y    I  + + CS +DL H VL+VGYGK         +W V+NSWG I  + G+F+I+
Sbjct: 252 LYYSGTI--SGKGCS-HDLDHGVLVVGYGKASQWSGETKFWRVKNSWGKIWGENGYFRIK 308

Query: 940 R-GNNACGIEQIAGYATI 956
           R  NN CGI     Y  +
Sbjct: 309 RDANNLCGIADDPTYPVL 326



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 119/228 (52%), Gaps = 16/228 (7%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +D  VPD+ DW +K       DQ  CGSCWAFS  G L+GQ AI     +  S+ QL++C
Sbjct: 106 EDLEVPDSIDWTEKGAVLEVKDQNPCGSCWAFSATGALKGQNAILNNVKISLSEQQLLDC 165

Query: 67  --AKQCSGC-DGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
             A     C +G     + +Y    G++SEK YPY     E   C YD SK  +   K +
Sbjct: 166 SAAYGNGNCKEGGDMSAAFDYVRDYGIQSEKSYPYIRKQTE---CQYDASKT-ILKIKGY 221

Query: 124 LHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
            +   SE  ++K +   GP+S+ +NSD +  Y    I  + + CS +DL H VL+VGYGK
Sbjct: 222 KNVTTSEEGLRKAVGTIGPISIAMNSDPLQLYYSGTI--SGKGCS-HDLDHGVLVVGYGK 278

Query: 183 QDN----IPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
                    +W V+NSWG I  + G+F+I+R  NN CGI     Y  +
Sbjct: 279 ASQWSGETKFWRVKNSWGKIWGENGYFRIKRDANNLCGIADDPTYPVL 326



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 965  CSPYDLGHAVLLVGYGKQD----DIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIA 1019
            CS +DL H VL+VGYGK      +  +W V+NSWG I  + G+F+I+R  NN CGI    
Sbjct: 263  CS-HDLDHGVLVVGYGKASQWSGETKFWRVKNSWGKIWGENGYFRIKRDANNLCGIADDP 321

Query: 1020 GYATI 1024
             Y  +
Sbjct: 322  TYPVL 326


>gi|391341652|ref|XP_003745141.1| PREDICTED: counting factor associated protein D-like [Metaseiulus
           occidentalis]
          Length = 751

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 167/352 (47%), Gaps = 28/352 (7%)

Query: 620 CLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF 679
           C  LP+ +     Q  AR     I   ++ ++ ++ E F  F    G+ Y +  E ++R 
Sbjct: 413 CTKLPTAS-----QSSARHLFDPIREFVSNNDSHVDEHFAEFKNTHGKAYESASEDRKRR 467

Query: 680 EYFKQ------DGHKKHERYGTS--EFSDRSPEEILCKTGFKWSERTYERIVADREKVEK 731
             F          ++++  Y  +  E SD+S +E+  + G         ++      ++ 
Sbjct: 468 HNFHHKMRFVNSMNRRNLSYALALNERSDQSRDEVSSQGGCL----RIPKVPNAPSDLQT 523

Query: 732 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK--LVEF 789
              E      +PD  DWR + V  P  +Q  CGSC++F+    LE QY I+ GK     F
Sbjct: 524 FSAETCDTAGIPDTVDWRLEGVVTPVKNQGTCGSCYSFASVAYLESQYIIRNGKGNTTRF 583

Query: 790 SKSQLVECA--KQCSGCDGCFFEPSIEYTHQAGLESEKDY-PYKNANGEKFKCAYDKSKV 846
           S+ Q+V+C+      GC G F   + EY  + GL +E  Y PY +  G K + A  K + 
Sbjct: 584 SEQQIVDCSWDSLNIGCKGGFPHGAFEYVQKYGLFTEDQYGPYLDDEG-KCRDAEMKGEP 642

Query: 847 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGH 904
            + T K F    G+E + + +  +GP++V ++  SD    Y+      ND TC  + L H
Sbjct: 643 IIPTLKSFTMMEGAECLLRHVGLHGPIAVGIHGSSDSFRAYSRGIY--NDPTCD-HSLTH 699

Query: 905 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           AVL+VGYG     PYWLV+NSWGP    EG+  + R  N CGIE    +A +
Sbjct: 700 AVLVVGYGSLRGEPYWLVKNSWGPKWGAEGYILVSRKENYCGIENYLAFAEL 751



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 162/350 (46%), Gaps = 23/350 (6%)

Query: 254 CLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF 313
           C  LP+ +     Q  AR     I   ++ ++ ++ E F  F    G+ Y +  E ++R 
Sbjct: 413 CTKLPTAS-----QSSARHLFDPIREFVSNNDSHVDEHFAEFKNTHGKAYESASEDRKRR 467

Query: 314 EYFKQ------DGHKKHERYGTS--EFSDRSPEEILCKTGFKWSERTYERIVADREKVEK 365
             F          ++++  Y  +  E SD+S +E+  + G         ++      ++ 
Sbjct: 468 HNFHHKMRFVNSMNRRNLSYALALNERSDQSRDEVSSQGGCL----RIPKVPNAPSDLQT 523

Query: 366 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK--LVEF 423
              E      +PD  DWR + V  P  +Q  CGSC++F+    LE QY I+ GK     F
Sbjct: 524 FSAETCDTAGIPDTVDWRLEGVVTPVKNQGTCGSCYSFASVAYLESQYIIRNGKGNTTRF 583

Query: 424 SKSQLVECAKQCSGCGGCDGLEQ-PIEYTHQAGLESEKDY-PYRNGNGEKFKCAYDKSKV 481
           S+ Q+V+C+      G   G      EY  + GL +E  Y PY +  G K + A  K + 
Sbjct: 584 SEQQIVDCSWDSLNIGCKGGFPHGAFEYVQKYGLFTEDQYGPYLDDEG-KCRDAEMKGEP 642

Query: 482 KLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAV 541
            + T K F    G+E + + +  +GP++VG++     F   +    ND TC  + L HAV
Sbjct: 643 IIPTLKSFTMMEGAECLLRHVGLHGPIAVGIHGSSDSFRAYSRGIYNDPTCD-HSLTHAV 701

Query: 542 LLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           L+VGYG     PYWL +NSWGP    EG+  + R  N CGIE    +A +
Sbjct: 702 LVVGYGSLRGEPYWLVKNSWGPKWGAEGYILVSRKENYCGIENYLAFAEL 751



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 119/222 (53%), Gaps = 11/222 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGK--LVEFSKSQLVECA- 67
           +PD  DWR + V  P  +Q  CGSC++F+    LE QY I+ GK     FS+ Q+V+C+ 
Sbjct: 534 IPDTVDWRLEGVVTPVKNQGTCGSCYSFASVAYLESQYIIRNGKGNTTRFSEQQIVDCSW 593

Query: 68  -KQCSGCDGCFFEPSIEYTHQAGLESEKDY-PYKNANGEKFKCAYDKSKVKLFTGKDFLH 125
                GC G F   + EY  + GL +E  Y PY +  G K + A  K +  + T K F  
Sbjct: 594 DSLNIGCKGGFPHGAFEYVQKYGLFTEDQYGPYLDDEG-KCRDAEMKGEPIIPTLKSFTM 652

Query: 126 FNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
             G+E + + +  +GP++V ++  SD    Y+      ND TC  + L HAVL+VGYG  
Sbjct: 653 MEGAECLLRHVGLHGPIAVGIHGSSDSFRAYSRGIY--NDPTCD-HSLTHAVLVVGYGSL 709

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
              PYWLV+NSWGP    EG+  + R  N CGIE    +A +
Sbjct: 710 RGEPYWLVKNSWGPKWGAEGYILVSRKENYCGIENYLAFAEL 751



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            + ND TC  + L HAVL+VGYG     PYWLV+NSWGP    EG+  + R  N CGIE  
Sbjct: 687  IYNDPTCD-HSLTHAVLVVGYGSLRGEPYWLVKNSWGPKWGAEGYILVSRKENYCGIENY 745

Query: 1019 AGYATI 1024
              +A +
Sbjct: 746  LAFAEL 751


>gi|319976406|gb|ADV90878.1| cysteine proteinase B [Leishmania donovani]
          Length = 332

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 128/261 (49%), Gaps = 14/261 (5%)

Query: 690 HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDW 748
           H R+G ++F D S  E   +              A ++   +   +   D   VPDA DW
Sbjct: 2   HARFGITKFFDLSEAEFAARY-----LNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDW 56

Query: 749 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF 808
           R+K    P  +Q ACGSCWAFS  G +E Q+A     LV  S+ QLV C  + +GC+G  
Sbjct: 57  REKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGL 116

Query: 809 FEPSIEYT--HQAGLE-SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MK 864
              + E+   H  G+  +EK YPY + NG+  +C      V       ++    +ET M 
Sbjct: 117 MLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMA 176

Query: 865 KILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRN 924
             L + GP+++ +++     Y    +     +C+   L H VLLVGY K   +PYW+++N
Sbjct: 177 AWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPYWVIKN 232

Query: 925 SWGPIGPDEGFFKIERGNNAC 945
           SWG    ++G+ ++  G NAC
Sbjct: 233 SWGEDWGEKGYVRVAMGLNAC 253



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 128/262 (48%), Gaps = 15/262 (5%)

Query: 324 HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDW 382
           H R+G ++F D S  E   +              A ++   +   +   D   VPDA DW
Sbjct: 2   HARFGITKFFDLSEAEFAARY-----LNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDW 56

Query: 383 RKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCD 442
           R+K    P  +Q ACGSCWAFS  G +E Q+A     LV  S+ QLV C  + +GC G  
Sbjct: 57  REKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGL 116

Query: 443 GLEQPIEYT--HQAGLE-SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-M 498
            L Q  E+   H  G+  +EK YPY +GNG+  +C      V       ++    +ET M
Sbjct: 117 ML-QAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVM 175

Query: 499 KKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLAR 558
              L + GP+++ +++     Y    +     +C+   L H VLLVGY K   +PYW+ +
Sbjct: 176 AAWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPYWVIK 231

Query: 559 NSWGPIGPDEGFFKIERGNNAC 580
           NSWG    ++G+ ++  G NAC
Sbjct: 232 NSWGEDWGEKGYVRVAMGLNAC 253



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 110/208 (52%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +E Q+A     LV  S+ QLV C  + 
Sbjct: 50  VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKD 109

Query: 71  SGCDGCFFEPSIEYT--HQAGLE-SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC+G     + E+   H  G+  +EK YPY + NG+  +C      V       ++   
Sbjct: 110 NGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP 169

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            +ET M   L + GP+++ +++     Y    +     +C+   L H VLLVGY K   +
Sbjct: 170 SNETVMAAWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGV 225

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 226 PYWVIKNSWGEDWGEKGYVRVAMGLNAC 253


>gi|50355615|dbj|BAD29956.1| cysteine protease [Daucus carota]
          Length = 423

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 153/322 (47%), Gaps = 51/322 (15%)

Query: 662 IVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILCKTGF 712
           +VK  + Y      ++RFE FK +         G  +  + G ++F+D S EE   K+ F
Sbjct: 11  LVKHHKNYNALGAKEKRFEIFKDNLRFIDEHNKGVNQSFKLGLNKFADLSNEEY--KSMF 68

Query: 713 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 772
                   R+V DR+  E    +      +P + DWR+K    P  DQ  CGSCWAFS  
Sbjct: 69  LGG-----RMVRDRKGFESDRFKYGVGDELPQSVDWREKGAVAPVKDQGQCGSCWAFSTV 123

Query: 773 GMLEGQYAIKTGKLVEFSKSQLVECAKQCS-GCDGCFFEPSIEY-THQAGLESEKDYPYK 830
             +EG   I TG L+  S+ +LV+C K  + GC+G F + + E+     G+++E DYPYK
Sbjct: 124 AAVEGINQIATGDLISLSEQELVDCDKGFNQGCNGGFMDYAFEFIVKNGGIDTEDDYPYK 183

Query: 831 NANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSV----------LLN 878
             +G+   C  ++   K+ T   F  +  N  +++KK +  + P+SV          L  
Sbjct: 184 GVDGQ---CDQNRKNAKVVTINGFEDVPQNDEKSLKKAV-AHQPVSVAIEAGGRAFQLYE 239

Query: 879 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 938
           S + +   GT            DL H V+ VGYG +D   YW+VRNSWGP   + G+ ++
Sbjct: 240 SGIFNGLCGT------------DLDHGVVAVGYGTEDGKDYWIVRNSWGPNWGENGYIRL 287

Query: 939 ER-----GNNACGIEQIAGYAT 955
           ER         CGI     Y T
Sbjct: 288 ERNVASTNTGKCGIAMQPSYPT 309



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 151/321 (47%), Gaps = 48/321 (14%)

Query: 296 IVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILCKTGF 346
           +VK  + Y      ++RFE FK +         G  +  + G ++F+D S EE   K+ F
Sbjct: 11  LVKHHKNYNALGAKEKRFEIFKDNLRFIDEHNKGVNQSFKLGLNKFADLSNEEY--KSMF 68

Query: 347 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 406
                   R+V DR+  E    +      +P + DWR+K    P  DQ  CGSCWAFS  
Sbjct: 69  LGG-----RMVRDRKGFESDRFKYGVGDELPQSVDWREKGAVAPVKDQGQCGSCWAFSTV 123

Query: 407 GMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEY-THQAGLESEKDYP 463
             +EG   I TG L+  S+ +LV+C K  +   GC+G  ++   E+     G+++E DYP
Sbjct: 124 AAVEGINQIATGDLISLSEQELVDCDKGFN--QGCNGGFMDYAFEFIVKNGGIDTEDDYP 181

Query: 464 YRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPLSVGLNSHLIHF-- 519
           Y+  +G+   C  ++   K+ T   F  +  N  +++KK +  + P+SV + +    F  
Sbjct: 182 YKGVDGQ---CDQNRKNAKVVTINGFEDVPQNDEKSLKKAV-AHQPVSVAIEAGGRAFQL 237

Query: 520 -----YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIE 574
                +NG             DL H V+ VGYG +D   YW+ RNSWGP   + G+ ++E
Sbjct: 238 YESGIFNGL---------CGTDLDHGVVAVGYGTEDGKDYWIVRNSWGPNWGENGYIRLE 288

Query: 575 R-----GNNACGIEQIAGYAT 590
           R         CGI     Y T
Sbjct: 289 RNVASTNTGKCGIAMQPSYPT 309



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 117/233 (50%), Gaps = 35/233 (15%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P + DWR+K    P  DQ  CGSCWAFS    +EG   I TG L+  S+ +LV+C K  
Sbjct: 93  LPQSVDWREKGAVAPVKDQGQCGSCWAFSTVAAVEGINQIATGDLISLSEQELVDCDKGF 152

Query: 71  S-GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHF 126
           + GC+G F + + E+     G+++E DYPYK  +G+   C  ++   K+ T   F  +  
Sbjct: 153 NQGCNGGFMDYAFEFIVKNGGIDTEDDYPYKGVDGQ---CDQNRKNAKVVTINGFEDVPQ 209

Query: 127 NGSETMKKILYKYGPLSV----------LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 176
           N  +++KK +  + P+SV          L  S + +   GT            DL H V+
Sbjct: 210 NDEKSLKKAV-AHQPVSVAIEAGGRAFQLYESGIFNGLCGT------------DLDHGVV 256

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-----GNNACGIEQIAGYAT 224
            VGYG +D   YW+VRNSWGP   + G+ ++ER         CGI     Y T
Sbjct: 257 AVGYGTEDGKDYWIVRNSWGPNWGENGYIRLERNVASTNTGKCGIAMQPSYPT 309



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-----GNNACGIEQIAGYAT 1023
            DL H V+ VGYG +D   YW+VRNSWGP   + G+ ++ER         CGI     Y T
Sbjct: 250  DLDHGVVAVGYGTEDGKDYWIVRNSWGPNWGENGYIRLERNVASTNTGKCGIAMQPSYPT 309


>gi|32394730|gb|AAM96001.1| cathepsin L precursor [Metapenaeus ensis]
          Length = 306

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 151/318 (47%), Gaps = 32/318 (10%)

Query: 292 FKAFIVKRGRQYANDEE------IKERFEYFKQDGHKKHER------YGTSEFSDRSPEE 339
           ++ F V+ GR Y    E      + E+ + F +D + K E          ++F D + EE
Sbjct: 3   WQDFKVQYGRHYGTAREDLYRQSVFEQNQQFIEDHNAKFENGEVTFTLKMNQFGDMTSEE 62

Query: 340 ILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
                 GF          V  R  V   ++E + D  +P   DWR K    P  DQ  CG
Sbjct: 63  FAATMNGF--------LNVPTRHPV--AILEAD-DETLPKHVDWRTKGAVTPVKDQKQCG 111

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGL-EQPIEYTHQ-AGL 456
           SCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +    G C GL +Q  +Y  +  G+
Sbjct: 112 SCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCSGKFGNMGCCGGLMDQAFKYIKENKGI 171

Query: 457 ESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLYFNGSETMKKILYKYGPLSVGLNSH 515
           ++E+ YPY   +G   KC +D S V    TG   +      ++ K +   GP+SV +++ 
Sbjct: 172 DTEESYPYEAQDG---KCRFDSSNVGATDTGFVDIAHGEENSLMKAVANIGPISVAIDAS 228

Query: 516 LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDEGFFKIE 574
              F         ++ CS   L H VL +GYG+ DD   YWL +NSW     D+GF ++ 
Sbjct: 229 HPSFQFYHQGVYYEKECSSTMLDHGVLAIGYGETDDGKEYWLVKNSWNTSWGDKGFIQMS 288

Query: 575 RG-NNACGIEQIAGYATI 591
           R   N CGI   A Y  +
Sbjct: 289 RNKKNNCGIASQASYPLV 306



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 153/322 (47%), Gaps = 41/322 (12%)

Query: 658 FKAFIVKRGRQYANDEE------IKERFEYFKQDGHKKHER------YGTSEFSDRSPEE 705
           ++ F V+ GR Y    E      + E+ + F +D + K E          ++F D + EE
Sbjct: 3   WQDFKVQYGRHYGTAREDLYRQSVFEQNQQFIEDHNAKFENGEVTFTLKMNQFGDMTSEE 62

Query: 706 ILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
                 GF          V  R  V   ++E + D  +P   DWR K    P  DQ  CG
Sbjct: 63  FAATMNGF--------LNVPTRHPV--AILEAD-DETLPKHVDWRTKGAVTPVKDQKQCG 111

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQ-AGL 821
           SCWAFS  G LEGQ+ +K GKLV  S+  LV+C+ +    GC G   + + +Y  +  G+
Sbjct: 112 SCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCSGKFGNMGCCGGLMDQAFKYIKENKGI 171

Query: 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE--TMKKILYKYGPLSVLLNS 879
           ++E+ YPY+  +G   KC +D S V   T   F+     E  ++ K +   GP+SV +++
Sbjct: 172 DTEESYPYEAQDG---KCRFDSSNVGA-TDTGFVDIAHGEENSLMKAVANIGPISVAIDA 227

Query: 880 ---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGF 935
                   + G    K    CS   L H VL +GYG+ D+   YWLV+NSW     D+GF
Sbjct: 228 SHPSFQFYHQGVYYEKE---CSSTMLDHGVLAIGYGETDDGKEYWLVKNSWNTSWGDKGF 284

Query: 936 FKIERG-NNACGIEQIAGYATI 956
            ++ R   N CGI   A Y  +
Sbjct: 285 IQMSRNKKNNCGIASQASYPLV 306



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 118/228 (51%), Gaps = 17/228 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D  +P   DWR K    P  DQ  CGSCWAFS  G LEGQ+ +K GKLV  S+  LV+C+
Sbjct: 86  DETLPKHVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCS 145

Query: 68  KQCS--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
            +    GC G   + + +Y  +  G+++E+ YPY+  +G   KC +D S V   T   F+
Sbjct: 146 GKFGNMGCCGGLMDQAFKYIKENKGIDTEESYPYEAQDG---KCRFDSSNVGA-TDTGFV 201

Query: 125 HFNGSE--TMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
                E  ++ K +   GP+SV +++        + G    K    CS   L H VL +G
Sbjct: 202 DIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGVYYEKE---CSSTMLDHGVLAIG 258

Query: 180 YGKQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           YG+ D+   YWLV+NSW     D+GF ++ R   N CGI   A Y  +
Sbjct: 259 YGETDDGKEYWLVKNSWNTSWGDKGFIQMSRNKKNNCGIASQASYPLV 306



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 17/110 (15%)

Query: 932  DEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLL 976
            D GF  I  G     ++ +A    I V               V  ++ CS   L H VL 
Sbjct: 197  DTGFVDIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGVYYEKECSSTMLDHGVLA 256

Query: 977  VGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            +GYG+ DD   YWLV+NSW     D+GF ++ R   N CGI   A Y  +
Sbjct: 257  IGYGETDDGKEYWLVKNSWNTSWGDKGFIQMSRNKKNNCGIASQASYPLV 306


>gi|228245|prf||1801240C Cys protease 3
          Length = 321

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 150/318 (47%), Gaps = 32/318 (10%)

Query: 657 TFKAFIVKRGRQYANDEEIKERFEYFKQ------DGHKKHE------RYGTSEFSDRSPE 704
           ++  F  + GR+Y + +E   R   F+Q      D +KK E      +   ++F D + E
Sbjct: 18  SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNE 77

Query: 705 EI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
           E      G+K   R   + V   E             P+    DWR K +  P  DQ  C
Sbjct: 78  EFNAVMKGYKKGSRGEPKAVFTAEGR-----------PMARDVDWRTKALVTPVKDQEQC 126

Query: 764 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAG 820
           GSCWAFS  G LEGQ+ +K  +LV  S+ QLV+C+      GC G +   + +Y     G
Sbjct: 127 GSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGG 186

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
           +++E  YPY+    E   C +D + +  + TG   +  +  E +++ +   GP+SV +++
Sbjct: 187 IDTESSYPYE---AEDRSCRFDANSIGAICTGSVEIVQHTEEALQEAVSGVGPISVAIDA 243

Query: 880 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
                   +     ++ CSP  L H VL VGYG +    YWLV+NSWG    D G+ K+ 
Sbjct: 244 SHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMS 303

Query: 940 RG-NNACGIEQIAGYATI 956
           R  +N CGI     Y T+
Sbjct: 304 RNRDNNCGIASEPSYPTV 321



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 149/319 (46%), Gaps = 33/319 (10%)

Query: 291 TFKAFIVKRGRQYANDEEIKERFEYFKQ------DGHKKHE------RYGTSEFSDRSPE 338
           ++  F  + GR+Y + +E   R   F+Q      D +KK E      +   ++F D + E
Sbjct: 18  SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNE 77

Query: 339 EI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
           E      G+K   R   + V   E             P+    DWR K +  P  DQ  C
Sbjct: 78  EFNAVMKGYKKGSRGEPKAVFTAEGR-----------PMARDVDWRTKALVTPVKDQEQC 126

Query: 398 GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCGGCDGLEQPIEYTH-QA 454
           GSCWAFS  G LEGQ+ +K  +LV  S+ QLV+C+      GCGG   +    +Y     
Sbjct: 127 GSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGG-GWMTSAFDYIKDNG 185

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSETMKKILYKYGPLSVGLN 513
           G+++E  YPY     E   C +D + +  + TG   +  +  E +++ +   GP+SV ++
Sbjct: 186 GIDTESSYPYE---AEDRSCRFDANSIGAICTGSVEIVQHTEEALQEAVSGVGPISVAID 242

Query: 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKI 573
           +    F   +     ++ CSP  L H VL VGYG +    YWL +NSWG    D G+ K+
Sbjct: 243 ASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKM 302

Query: 574 ERG-NNACGIEQIAGYATI 591
            R  +N CGI     Y T+
Sbjct: 303 SRNRDNNCGIASEPSYPTV 321



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 115/221 (52%), Gaps = 8/221 (3%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ 69
           P+    DWR K +  P  DQ  CGSCWAFS  G LEGQ+ +K  +LV  S+ QLV+C+  
Sbjct: 104 PMARDVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTD 163

Query: 70  --CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLH 125
               GC G +   + +Y     G+++E  YPY+    E   C +D + +  + TG   + 
Sbjct: 164 YGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYE---AEDRSCRFDANSIGAICTGSVEIV 220

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            +  E +++ +   GP+SV +++        +     ++ CSP  L H VL VGYG +  
Sbjct: 221 QHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTEST 280

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWLV+NSWG    D G+ K+ R  +N CGI     Y T+
Sbjct: 281 KDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYPTV 321



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 1020
            ++ CSP  L H VL VGYG +    YWLV+NSWG    D G+ K+ R  +N CGI     
Sbjct: 258  EQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPS 317

Query: 1021 YATI 1024
            Y T+
Sbjct: 318  YPTV 321


>gi|535600|gb|AAA29137.1| cathepsin [Fasciola hepatica]
          Length = 326

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDRIDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKNEKTSISFSEQQLVDCSGPF 167

Query: 802 S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
              GC+G   E + EY  + GLE+E  YPY+   G+   C Y++   V   TG   +H  
Sbjct: 168 GNYGCNGGLMENAYEYLKRFGLETESSYPYRAVEGQ---CRYNEQLGVAKVTGYYTVHSG 224

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               ++ ++    P +V L+  SD +   +G       +TCSP  L H VL VGYG QD 
Sbjct: 225 DEVELQNLVGCRRPAAVALDVESDFMMYRSGI---YQSQTCSPDRLNHGVLAVGYGIQDG 281

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
             YW+V+NSWG    ++G+ ++ R   N CGI  +A    +
Sbjct: 282 TDYWIVKNSWGTWWGEDGYIRMVRKRGNMCGIASLASVPMV 322



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 118/226 (52%), Gaps = 15/226 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDRIDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKNEKTSISFSEQQLVDCSGPF 167

Query: 71  S--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
              GC+G   E + EY  + GLE+E  YPY+   G+   C Y++   V   TG   +H  
Sbjct: 168 GNYGCNGGLMENAYEYLKRFGLETESSYPYRAVEGQ---CRYNEQLGVAKVTGYYTVHSG 224

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               ++ ++    P +V L+  SD +   +G       +TCSP  L H VL VGYG QD 
Sbjct: 225 DEVELQNLVGCRRPAAVALDVESDFMMYRSGI---YQSQTCSPDRLNHGVLAVGYGIQDG 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATIDVVIQ 230
             YW+V+NSWG    ++G+ ++ R   N CG   IA  A++ +V Q
Sbjct: 282 TDYWIVKNSWGTWWGEDGYIRMVRKRGNMCG---IASLASVPMVAQ 324



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G +EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDRIDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKNEKTSISFSEQQLVDCSGPF 167

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC+G  +E   EY  + GLE+E  YPYR   G+   C Y++   V   TG   ++ 
Sbjct: 168 -GNYGCNGGLMENAYEYLKRFGLETESSYPYRAVEGQ---CRYNEQLGVAKVTGYYTVHS 223

Query: 493 NGSETMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
                ++ ++    P +V L+  S  + + +G       +TCSP  L H VL VGYG QD
Sbjct: 224 GDEVELQNLVGCRRPAAVALDVESDFMMYRSGI---YQSQTCSPDRLNHGVLAVGYGIQD 280

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATIDVVIQ 596
              YW+ +NSWG    ++G+ ++ R   N CG   IA  A++ +V Q
Sbjct: 281 GTDYWIVKNSWGTWWGEDGYIRMVRKRGNMCG---IASLASVPMVAQ 324



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 1017
            +   +TCSP  L H VL VGYG QD   YW+V+NSWG    ++G+ ++ R   N CGI  
Sbjct: 256  IYQSQTCSPDRLNHGVLAVGYGIQDGTDYWIVKNSWGTWWGEDGYIRMVRKRGNMCGIAS 315

Query: 1018 IAGYATI 1024
            +A    +
Sbjct: 316  LASVPMV 322


>gi|154332645|ref|XP_001562139.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059587|emb|CAM37169.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 143/314 (45%), Gaps = 40/314 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 710 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 98  YLSGATHFAKAKKFASQYYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 144

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---TH 817
             CGSCWAFS  G +E ++ + T  L+  S+ +LV C     GC+G     + ++     
Sbjct: 145 GMCGSCWAFSAIGNIESKWYLATHSLISLSEQELVSCDDVDEGCNGGLMLQAFDWLLNNR 204

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHFNGSETMKKILYKYGPLSV 875
              + +   YPY + NG   +C+     V      G   +  N  +TM   L   GP+++
Sbjct: 205 NGAVYTGASYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESN-EDTMAAWLAANGPIAI 263

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
            +++     Y G  +     +C    L H VLLVGY     +PYWL++NSWG    ++G+
Sbjct: 264 AVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGEVPYWLIKNSWGENWGEKGY 319

Query: 936 FKIERGNNACGIEQ 949
            ++ +G N C I++
Sbjct: 320 VRVRKGTNECLIQE 333



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 39/314 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 344 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 98  YLSGATHFAKAKKFASQYYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 144

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---T 451
             CGSCWAFS  G +E ++ + T  L+  S+ +LV C     GC G   L Q  ++    
Sbjct: 145 GMCGSCWAFSAIGNIESKWYLATHSLISLSEQELVSCDDVDEGCNGGLML-QAFDWLLNN 203

Query: 452 HQAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSETMKKILYKYGPLSV 510
               + +   YPY +GNG   +C+     V   +        +  +TM   L   GP+++
Sbjct: 204 RNGAVYTGASYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAI 263

Query: 511 GLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGF 570
            +++     Y G  +     +C    L H VLLVGY    ++PYWL +NSWG    ++G+
Sbjct: 264 AVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGEVPYWLIKNSWGENWGEKGY 319

Query: 571 FKIERGNNACGIEQ 584
            ++ +G N C I++
Sbjct: 320 VRVRKGTNECLIQE 333



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 10/212 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P A DWR+K    P  DQ  CGSCWAFS  G +E ++ + T  L+  S+ +LV C     
Sbjct: 127 PAAVDWREKGAVTPVKDQGMCGSCWAFSAIGNIESKWYLATHSLISLSEQELVSCDDVDE 186

Query: 72  GCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHF 126
           GC+G     + ++        + +   YPY + NG   +C+     V      G   +  
Sbjct: 187 GCNGGLMLQAFDWLLNNRNGAVYTGASYPYVSGNGSVPECSESSDLVIGAYIDGHVTIES 246

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           N  +TM   L   GP+++ +++     Y G  +     +C    L H VLLVGY     +
Sbjct: 247 N-EDTMAAWLAANGPIAIAVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           PYWL++NSWG    ++G+ ++ +G N C I++
Sbjct: 302 PYWLIKNSWGENWGEKGYVRVRKGTNECLIQE 333


>gi|6630974|gb|AAF19631.1|AF194427_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 146/303 (48%), Gaps = 24/303 (7%)

Query: 663 VKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 722
           V R R + ++ +I ++       G   + R G + ++D   EE +   G          +
Sbjct: 37  VLRKRVWESNLQIVQQHNVLADQGQANY-RLGMNTYADLYNEEFMALKGSG-------GL 88

Query: 723 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 782
           +  ++K      +      +P + DWR +    P  DQ  CGSCW FS  G LEGQ+  K
Sbjct: 89  LQAKDKSSTQTFKPLVGVTLPSSVDWRNQGYVTPVKDQGQCGSCWTFSATGSLEGQHFAK 148

Query: 783 TGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKC 839
           TG L+  S+ QLV+CA +    GC+G   E + +Y     G+E E  YPY   +G   +C
Sbjct: 149 TGNLLSLSEQQLVDCAGRYGNYGCNGGLMESAYDYIKGVGGVELESAYPYTARDG---RC 205

Query: 840 AYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD----LIHDYNGTPIRKND 894
            +D+SK V    G   +     + + + +   GP++V +++      +++      R+  
Sbjct: 206 KFDRSKVVATCKGYVVIPVGDEQALMQAVGTIGPVAVSIDASGYSFQLYESGVYDFRR-- 263

Query: 895 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 953
             CS  +L H VL VGYG +    YWLV+NSWGP   D+G+ K+ +  NN CGI   + Y
Sbjct: 264 --CSSTNLDHGVLAVGYGTEGGQNYWLVKNSWGPGWGDQGYIKMSKDKNNQCGIATDSCY 321

Query: 954 ATI 956
             +
Sbjct: 322 PLV 324



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 146/301 (48%), Gaps = 19/301 (6%)

Query: 297 VKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 356
           V R R + ++ +I ++       G   + R G + ++D   EE +   G          +
Sbjct: 37  VLRKRVWESNLQIVQQHNVLADQGQANY-RLGMNTYADLYNEEFMALKGSG-------GL 88

Query: 357 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 416
           +  ++K      +      +P + DWR +    P  DQ  CGSCW FS  G LEGQ+  K
Sbjct: 89  LQAKDKSSTQTFKPLVGVTLPSSVDWRNQGYVTPVKDQGQCGSCWTFSATGSLEGQHFAK 148

Query: 417 TGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFK 473
           TG L+  S+ QLV+CA +  G  GC+G  +E   +Y     G+E E  YPY   +G   +
Sbjct: 149 TGNLLSLSEQQLVDCAGR-YGNYGCNGGLMESAYDYIKGVGGVELESAYPYTARDG---R 204

Query: 474 CAYDKSKVKLFTGKDFLYF--NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDET 531
           C +D+SKV + T K ++       + + + +   GP++V +++    F        +   
Sbjct: 205 CKFDRSKV-VATCKGYVVIPVGDEQALMQAVGTIGPVAVSIDASGYSFQLYESGVYDFRR 263

Query: 532 CSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 590
           CS  +L H VL VGYG +    YWL +NSWGP   D+G+ K+ +  NN CGI   + Y  
Sbjct: 264 CSSTNLDHGVLAVGYGTEGGQNYWLVKNSWGPGWGDQGYIKMSKDKNNQCGIATDSCYPL 323

Query: 591 I 591
           +
Sbjct: 324 V 324



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 118/224 (52%), Gaps = 16/224 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P + DWR +    P  DQ  CGSCW FS  G LEGQ+  KTG L+  S+ QLV+CA + 
Sbjct: 108 LPSSVDWRNQGYVTPVKDQGQCGSCWTFSATGSLEGQHFAKTGNLLSLSEQQLVDCAGRY 167

Query: 71  S--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHF 126
              GC+G   E + +Y     G+E E  YPY   +G   +C +D+SK V    G   +  
Sbjct: 168 GNYGCNGGLMESAYDYIKGVGGVELESAYPYTARDG---RCKFDRSKVVATCKGYVVIPV 224

Query: 127 NGSETMKKILYKYGPLSVLLNSD----LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
              + + + +   GP++V +++      +++      R+    CS  +L H VL VGYG 
Sbjct: 225 GDEQALMQAVGTIGPVAVSIDASGYSFQLYESGVYDFRR----CSSTNLDHGVLAVGYGT 280

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           +    YWLV+NSWGP   D+G+ K+ +  NN CGI   + Y  +
Sbjct: 281 EGGQNYWLVKNSWGPGWGDQGYIKMSKDKNNQCGIATDSCYPLV 324



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            CS  +L H VL VGYG +    YWLV+NSWGP   D+G+ K+ +  NN CGI   + Y  
Sbjct: 264  CSSTNLDHGVLAVGYGTEGGQNYWLVKNSWGPGWGDQGYIKMSKDKNNQCGIATDSCYPL 323

Query: 1024 I 1024
            +
Sbjct: 324  V 324


>gi|354622947|ref|NP_001002938.2| cathepsin S precursor [Canis lupus familiaris]
          Length = 339

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 131/269 (48%), Gaps = 19/269 (7%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G +   D + EE++   G       ++R V  R    + L         PD+ DWR+K  
Sbjct: 84  GMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSNQKL---------PDSVDWREKGC 134

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDGCFFE 810
                 Q +CG+CWAFS  G LE Q  +KTGKLV  S   LV+C+ +     GC+G F  
Sbjct: 135 VTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMT 194

Query: 811 PSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK-DFLHFNGSETMKKILY 868
            + +Y     G++SE  YPYK  NG   KC YD  K      K   L F   + +K+ + 
Sbjct: 195 TAFQYIIDNNGIDSEASYPYKAMNG---KCRYDSKKRAATCSKYTELPFGSEDALKEAVA 251

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
             GP+SV +++     +        + +C+  ++ H VL+VGYG  +   YWLV+NSWG 
Sbjct: 252 NKGPVSVAIDASHYSFFLYRSGVYYEPSCTQ-NVNHGVLVVGYGNLNGKDYWLVKNSWGL 310

Query: 929 IGPDEGFFKIERGN-NACGIEQIAGYATI 956
              D+G+ ++ R + N CGI     Y  I
Sbjct: 311 NFGDQGYIRMARNSGNHCGIASYPSYPEI 339



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 131/269 (48%), Gaps = 18/269 (6%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G +   D + EE++   G       ++R V  R    + L         PD+ DWR+K  
Sbjct: 84  GMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSNQKL---------PDSVDWREKGC 134

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LE 445
                 Q +CG+CWAFS  G LE Q  +KTGKLV  S   LV+C+ +  G  GC+G  + 
Sbjct: 135 VTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMT 194

Query: 446 QPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGK-DFLYFNGSETMKKILY 503
              +Y     G++SE  YPY+  NG   KC YD  K      K   L F   + +K+ + 
Sbjct: 195 TAFQYIIDNNGIDSEASYPYKAMNG---KCRYDSKKRAATCSKYTELPFGSEDALKEAVA 251

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GP+SV +++    F+        + +C+  ++ H VL+VGYG  +   YWL +NSWG 
Sbjct: 252 NKGPVSVAIDASHYSFFLYRSGVYYEPSCTQ-NVNHGVLVVGYGNLNGKDYWLVKNSWGL 310

Query: 564 IGPDEGFFKIERGN-NACGIEQIAGYATI 591
              D+G+ ++ R + N CGI     Y  I
Sbjct: 311 NFGDQGYIRMARNSGNHCGIASYPSYPEI 339



 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 115/221 (52%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD+ DWR+K        Q  CG+CWAFS  G LE Q  +KTGKLV  S   LV+C+ + 
Sbjct: 123 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 182

Query: 70  --CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK-DFLH 125
               GC+G F   + +Y     G++SE  YPYK  NG   KC YD  K      K   L 
Sbjct: 183 YGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNG---KCRYDSKKRAATCSKYTELP 239

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           F   + +K+ +   GP+SV +++     +        + +C+  ++ H VL+VGYG  + 
Sbjct: 240 FGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQ-NVNHGVLVVGYGNLNG 298

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 299 KDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSYPEI 339



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
            ++ H VL+VGYG  +   YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 283  NVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSYPEI 339


>gi|313221001|emb|CBY31833.1| unnamed protein product [Oikopleura dioica]
 gi|313229611|emb|CBY18426.1| unnamed protein product [Oikopleura dioica]
          Length = 362

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 161/345 (46%), Gaps = 18/345 (5%)

Query: 626 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 685
           +T +++D+   R+     +    F+ E   E+ +  I + G    N   I+E    F+  
Sbjct: 22  MTRQMSDKYEQRLINEFKQWKDAFEKE--YESIEQEIERMGTWMKNMLHIEEH--NFQHS 77

Query: 686 GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPD 744
             KK    G +++ D+S EE      GF  +E    ++    E    +      +  +  
Sbjct: 78  LGKKTFTLGMNKYGDQSSEEFAATYNGFLHAEGQTRKLFGLHEDAFYLDWVDADESKLDK 137

Query: 745 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CS 802
           + DWR+K       DQ  CGSCW+FS  G LEGQ A   GKL + S+  LV+C++     
Sbjct: 138 SVDWREKGAVTEVKDQGQCGSCWSFSATGALEGQMAQVFGKLPDLSEQNLVDCSRPEGNQ 197

Query: 803 GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGS 860
           GC+G   + + +Y   Q GL+ E  YPY+  + +  +C YDKS  +   TG   +     
Sbjct: 198 GCNGGLMDAAFQYVKDQDGLDGEDWYPYEGVDNK--ECRYDKSHREADDTGFKMIPEGNE 255

Query: 861 ETMKKILYKYGPLSVLL---NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 917
           + +K  L K GP+SV +   N       +G     N   CSP +L H VL VGYG +D  
Sbjct: 256 KALKHALAKVGPVSVAIDASNPSFQFYQSGVYYEPN---CSPENLDHGVLAVGYGTEDGE 312

Query: 918 PYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATIDVVKN 961
            Y+LV+NSW     D G+ K+ R   N CGI   A Y  +  V N
Sbjct: 313 HYYLVKNSWSEAWGDNGYIKMARNKENHCGIASYAVYPIVSSVDN 357



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 160/344 (46%), Gaps = 19/344 (5%)

Query: 260 LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 319
           +T +++D+   R+     +    F+ E   E+ +  I + G    N   I+E    F+  
Sbjct: 22  MTRQMSDKYEQRLINEFKQWKDAFEKE--YESIEQEIERMGTWMKNMLHIEEH--NFQHS 77

Query: 320 GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPD 378
             KK    G +++ D+S EE      GF  +E    ++    E    +      +  +  
Sbjct: 78  LGKKTFTLGMNKYGDQSSEEFAATYNGFLHAEGQTRKLFGLHEDAFYLDWVDADESKLDK 137

Query: 379 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 438
           + DWR+K       DQ  CGSCW+FS  G LEGQ A   GKL + S+  LV+C++   G 
Sbjct: 138 SVDWREKGAVTEVKDQGQCGSCWSFSATGALEGQMAQVFGKLPDLSEQNLVDCSRP-EGN 196

Query: 439 GGCDG--LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNG 494
            GC+G  ++   +Y   Q GL+ E  YPY   + +  +C YDKS  +   TG   +    
Sbjct: 197 QGCNGGLMDAAFQYVKDQDGLDGEDWYPYEGVDNK--ECRYDKSHREADDTGFKMIPEGN 254

Query: 495 SETMKKILYKYGPLSVGL---NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD 551
            + +K  L K GP+SV +   N     + +G     N   CSP +L H VL VGYG +D 
Sbjct: 255 EKALKHALAKVGPVSVAIDASNPSFQFYQSGVYYEPN---CSPENLDHGVLAVGYGTEDG 311

Query: 552 IPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATIDVV 594
             Y+L +NSW     D G+ K+ R   N CGI   A Y  +  V
Sbjct: 312 EHYYLVKNSWSEAWGDNGYIKMARNKENHCGIASYAVYPIVSSV 355



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 113/221 (51%), Gaps = 13/221 (5%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGC 73
           DWR+K       DQ  CGSCW+FS  G LEGQ A   GKL + S+  LV+C++     GC
Sbjct: 140 DWREKGAVTEVKDQGQCGSCWSFSATGALEGQMAQVFGKLPDLSEQNLVDCSRPEGNQGC 199

Query: 74  DGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSET 131
           +G   + + +Y   Q GL+ E  YPY+  + +  +C YDKS  +   TG   +     + 
Sbjct: 200 NGGLMDAAFQYVKDQDGLDGEDWYPYEGVDNK--ECRYDKSHREADDTGFKMIPEGNEKA 257

Query: 132 MKKILYKYGPLSVLL---NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
           +K  L K GP+SV +   N       +G     N   CSP +L H VL VGYG +D   Y
Sbjct: 258 LKHALAKVGPVSVAIDASNPSFQFYQSGVYYEPN---CSPENLDHGVLAVGYGTEDGEHY 314

Query: 189 WLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATIDVV 228
           +LV+NSW     D G+ K+ R   N CGI   A Y  +  V
Sbjct: 315 YLVKNSWSEAWGDNGYIKMARNKENHCGIASYAVYPIVSSV 355



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYA 1022
             CSP +L H VL VGYG +D   Y+LV+NSW     D G+ K+ R   N CGI   A Y 
Sbjct: 291  NCSPENLDHGVLAVGYGTEDGEHYYLVKNSWSEAWGDNGYIKMARNKENHCGIASYAVYP 350

Query: 1023 TI 1024
             +
Sbjct: 351  IV 352


>gi|42564161|gb|AAS20592.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 326

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 152/312 (48%), Gaps = 25/312 (8%)

Query: 660 AFIVKRGRQYANDEEIKERFEYFKQDGHK------KHERYGTSEFSDRSPEEILCKTGFK 713
           AF    G+ Y +  E + RF  F+ +  K      K+++   S F   +P   L    FK
Sbjct: 25  AFKQTHGKTYKSLLEERTRFGIFQSNLRKIEEHNAKYDKGEESYFLGVTPFADLTHDEFK 84

Query: 714 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 773
              R   R +  +  VE  L    +   VPD+ DW +K        Q  CGSCWAFS  G
Sbjct: 85  DKLR---RQIKTKPNVEATLAVFPEGLEVPDSIDWTQKGAVLDVKYQGGCGSCWAFSATG 141

Query: 774 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD---GCFFEPSIEYTHQAGLESEKDYPYK 830
            LEGQ AI     +  S+ QL++C+K     D   G     + +Y    G+E++  YPYK
Sbjct: 142 ALEGQNAIVNNVKIPLSEQQLLDCSKPYGNDDCEHGGLMSFAFDYVLDKGIEADSSYPYK 201

Query: 831 NANGEKFKCAYDKSKVKLFTGKDFLHFNGS-ETMKKILYKYGPLSVLLNSDLIHDYNGTP 889
              G    C YD  K  L   K + + + S E +KK +   GP+SV +++D I  Y+G  
Sbjct: 202 ---GIDTPCQYDAKKTVLKI-KGYRNVSISEEELKKAVGTVGPVSVAIDADPIQLYSGGI 257

Query: 890 IRKNDETCSPYDLGHAVLLVGYGKQDNI----PYWLVRNSWGPIGPDEGFFKIER-GNNA 944
           +   D     ++L H VL VGYG++D++     +W V+NSWG    ++G+F+I+R  NN 
Sbjct: 258 L---DGLFCTHNLNHGVLAVGYGEEDHLFGKKKFWKVKNSWGKDWGEQGYFRIKRDANNL 314

Query: 945 CGIEQIAGYATI 956
           CGI   A Y  +
Sbjct: 315 CGIADKASYPIL 326



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 147/314 (46%), Gaps = 28/314 (8%)

Query: 294 AFIVKRGRQYANDEEIKERFEYFKQDGHK------KHERYGTSEFSDRSPEEILCKTGFK 347
           AF    G+ Y +  E + RF  F+ +  K      K+++   S F   +P   L    FK
Sbjct: 25  AFKQTHGKTYKSLLEERTRFGIFQSNLRKIEEHNAKYDKGEESYFLGVTPFADLTHDEFK 84

Query: 348 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 407
              R   R +  +  VE  L    +   VPD+ DW +K        Q  CGSCWAFS  G
Sbjct: 85  DKLR---RQIKTKPNVEATLAVFPEGLEVPDSIDWTQKGAVLDVKYQGGCGSCWAFSATG 141

Query: 408 MLEGQYAIKTGKLVEFSKSQLVECAKQCSG--CGGCDGLEQPIEYTHQAGLESEKDYPYR 465
            LEGQ AI     +  S+ QL++C+K      C     +    +Y    G+E++  YPY+
Sbjct: 142 ALEGQNAIVNNVKIPLSEQQLLDCSKPYGNDDCEHGGLMSFAFDYVLDKGIEADSSYPYK 201

Query: 466 NGNGEKFKCAYDKSKVKLFTGKDFLYFNGS---ETMKKILYKYGPLSVGLNSHLIHFYNG 522
              G    C YD  K  L   K   Y N S   E +KK +   GP+SV +++  I  Y+G
Sbjct: 202 ---GIDTPCQYDAKKTVL---KIKGYRNVSISEEELKKAVGTVGPVSVAIDADPIQLYSG 255

Query: 523 TPIRKNDETCSPYDLGHAVLLVGYGKQDDI----PYWLARNSWGPIGPDEGFFKIER-GN 577
             +   D     ++L H VL VGYG++D +     +W  +NSWG    ++G+F+I+R  N
Sbjct: 256 GIL---DGLFCTHNLNHGVLAVGYGEEDHLFGKKKFWKVKNSWGKDWGEQGYFRIKRDAN 312

Query: 578 NACGIEQIAGYATI 591
           N CGI   A Y  +
Sbjct: 313 NLCGIADKASYPIL 326



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 16/224 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD+ DW +K        Q  CGSCWAFS  G LEGQ AI     +  S+ QL++C+K  
Sbjct: 110 VPDSIDWTQKGAVLDVKYQGGCGSCWAFSATGALEGQNAIVNNVKIPLSEQQLLDCSKPY 169

Query: 71  SGCD---GCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
              D   G     + +Y    G+E++  YPYK   G    C YD  K  L   K + + +
Sbjct: 170 GNDDCEHGGLMSFAFDYVLDKGIEADSSYPYK---GIDTPCQYDAKKTVLKI-KGYRNVS 225

Query: 128 GS-ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            S E +KK +   GP+SV +++D I  Y+G  +   D     ++L H VL VGYG++D++
Sbjct: 226 ISEEELKKAVGTVGPVSVAIDADPIQLYSGGIL---DGLFCTHNLNHGVLAVGYGEEDHL 282

Query: 187 ----PYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
                +W V+NSWG    ++G+F+I+R  NN CGI   A Y  +
Sbjct: 283 FGKKKFWKVKNSWGKDWGEQGYFRIKRDANNLCGIADKASYPIL 326



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 5/62 (8%)

Query: 968  YDLGHAVLLVGYGKQDDI----PYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYA 1022
            ++L H VL VGYG++D +     +W V+NSWG    ++G+F+I+R  NN CGI   A Y 
Sbjct: 265  HNLNHGVLAVGYGEEDHLFGKKKFWKVKNSWGKDWGEQGYFRIKRDANNLCGIADKASYP 324

Query: 1023 TI 1024
             +
Sbjct: 325  IL 326


>gi|449448298|ref|XP_004141903.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
 gi|449531757|ref|XP_004172852.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
          Length = 365

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHER---YGTSEFSDRSPEE 705
           + E +  ++ K G+ Y   +E ++RF+ FK+     D H    R    G + F+D + EE
Sbjct: 31  VREIYDLWLAKHGKAYNGIDEREKRFQIFKENLKFIDDHNSENRTYKVGLNMFADLTNEE 90

Query: 706 ---ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 762
              +   T    + R  +   A R         V     +P++ DWR +    P  +Q +
Sbjct: 91  YRALYLGTRSPPARRVMKAKTASRR------YAVNNLDRLPESMDWRTRGAVAPVKNQGS 144

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ-CSGCDGCFFEPSIEY-THQAG 820
           CGSCWAFS    +EG   I TG+L+  S+ +LV C K+  SGC+G   + + ++     G
Sbjct: 145 CGSCWAFSTIAAVEGINQIVTGELISLSEQELVSCDKKYNSGCNGGLMDYAFQFIIDNGG 204

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVLLN 878
           L++E+DYPY+  +G+   C   +   K+ +   +  +  N  E++KK +  + P+SV + 
Sbjct: 205 LDTEEDYPYEAFDGQ---CDPTRKNAKVVSIDAYEDVPANDEESLKKAV-AHQPVSVAIE 260

Query: 879 SD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFF 936
           +    +  Y           C    L H V+ VGYGK++ + YWLVRNSWG    ++G+F
Sbjct: 261 ASGLALQLYQSGVFTGK---CGSA-LDHGVVAVGYGKENGVDYWLVRNSWGTSWGEDGYF 316

Query: 937 KIERG-----NNACGIEQIAGYATIDVVKND 962
           K+ER         CGI   A Y     VKND
Sbjct: 317 KLERNVKHITEGKCGIAMQASYP----VKND 343



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 159/328 (48%), Gaps = 47/328 (14%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHER---YGTSEFSDRSPEE 339
           + E +  ++ K G+ Y   +E ++RF+ FK+     D H    R    G + F+D + EE
Sbjct: 31  VREIYDLWLAKHGKAYNGIDEREKRFQIFKENLKFIDDHNSENRTYKVGLNMFADLTNEE 90

Query: 340 ---ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 396
              +   T    + R  +   A R         V     +P++ DWR +    P  +Q +
Sbjct: 91  YRALYLGTRSPPARRVMKAKTASRR------YAVNNLDRLPESMDWRTRGAVAPVKNQGS 144

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ-CSGCGGCDGLEQPIEYTHQ-- 453
           CGSCWAFS    +EG   I TG+L+  S+ +LV C K+  SGC G  GL   ++Y  Q  
Sbjct: 145 CGSCWAFSTIAAVEGINQIVTGELISLSEQELVSCDKKYNSGCNG--GL---MDYAFQFI 199

Query: 454 ---AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF--LYFNGSETMKKILYKYGPL 508
               GL++E+DYPY   +G+   C   +   K+ +   +  +  N  E++KK +  + P+
Sbjct: 200 IDNGGLDTEEDYPYEAFDGQ---CDPTRKNAKVVSIDAYEDVPANDEESLKKAV-AHQPV 255

Query: 509 SVGLNSH---LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           SV + +    L  + +G    K    C    L H V+ VGYGK++ + YWL RNSWG   
Sbjct: 256 SVAIEASGLALQLYQSGVFTGK----CGSA-LDHGVVAVGYGKENGVDYWLVRNSWGTSW 310

Query: 566 PDEGFFKIERG-----NNACGIEQIAGY 588
            ++G+FK+ER         CGI   A Y
Sbjct: 311 GEDGYFKLERNVKHITEGKCGIAMQASY 338



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 118/223 (52%), Gaps = 19/223 (8%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P++ DWR +    P  +Q  CGSCWAFS    +EG   I TG+L+  S+ +LV C K+ 
Sbjct: 124 LPESMDWRTRGAVAPVKNQGSCGSCWAFSTIAAVEGINQIVTGELISLSEQELVSCDKKY 183

Query: 70  CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHF 126
            SGC+G   + + ++     GL++E+DYPY+  +G+   C   +   K+ +   +  +  
Sbjct: 184 NSGCNGGLMDYAFQFIIDNGGLDTEEDYPYEAFDGQ---CDPTRKNAKVVSIDAYEDVPA 240

Query: 127 NGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 184
           N  E++KK +  + P+SV + +    +  Y           C    L H V+ VGYGK++
Sbjct: 241 NDEESLKKAV-AHQPVSVAIEASGLALQLYQSGVFTGK---CGSA-LDHGVVAVGYGKEN 295

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERG-----NNACGIEQIAGY 222
            + YWLVRNSWG    ++G+FK+ER         CGI   A Y
Sbjct: 296 GVDYWLVRNSWGTSWGEDGYFKLERNVKHITEGKCGIAMQASY 338



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 5/57 (8%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-----NNACGIEQIAGY 1021
            L H V+ VGYGK++ + YWLVRNSWG    ++G+FK+ER         CGI   A Y
Sbjct: 282  LDHGVVAVGYGKENGVDYWLVRNSWGTSWGEDGYFKLERNVKHITEGKCGIAMQASY 338


>gi|170784978|pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine
           Protease Of T. Brucei Rhodesiense, Bound To Inhibitor
           K777
 gi|171848756|pdb|2P86|A Chain A, The High Resolution Crystal Structure Of Rohedsain, The
           Major Cathepsin L Protease From T. Brucei Rhodesiense,
           Bound To Inhibitor K11002
          Length = 215

 Score =  137 bits (346), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 7/217 (3%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     
Sbjct: 2   PAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDF 61

Query: 72  GCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 128
           GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++             
Sbjct: 62  GCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQD 121

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N PY
Sbjct: 122 EDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDASNPPY 177

Query: 189 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           W+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 178 WIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 214



 Score =  137 bits (346), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 7/217 (3%)

Query: 743 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 802
           P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     
Sbjct: 2   PAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDF 61

Query: 803 GCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 859
           GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++             
Sbjct: 62  GCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQD 121

Query: 860 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 919
            + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVGY    N PY
Sbjct: 122 EDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDASNPPY 177

Query: 920 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           W+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 178 WIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 214



 Score =  134 bits (338), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 72/217 (33%), Positives = 109/217 (50%), Gaps = 6/217 (2%)

Query: 377 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 436
           P A DWR+K    P  DQ  CGSCWAFS  G +EGQ+ +    LV  S+  LV C     
Sbjct: 2   PAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTIDF 61

Query: 437 GCGG--CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNG 494
           GCGG   D     I  ++   + +E  YPY +GNGE+ +C  +  ++             
Sbjct: 62  GCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQD 121

Query: 495 SETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPY 554
            + +   L + GPL++ +++     YNG  +     +C+   L H VLLVGY    + PY
Sbjct: 122 EDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVGYNDASNPPY 177

Query: 555 WLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           W+ +NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 178 WIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 214



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 1023
            +C+   L H VLLVGY    + PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 154  SCTSEQLDHGVLLVGYNDASNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 213

Query: 1024 I 1024
            +
Sbjct: 214  V 214


>gi|213623960|gb|AAI70453.1| Hypothetical protein LOC100127265 [Xenopus laevis]
          Length = 331

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/268 (36%), Positives = 138/268 (51%), Gaps = 20/268 (7%)

Query: 330 SEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP--VPDAWDWRKKN 386
           ++  D + EE++   TG K         +  R K   +  E +K  P  VPD+ D+RKK 
Sbjct: 78  NQLGDMTSEEVVRTMTGLK---------IHKRNKPTNLTFEHDK-APEKVPDSIDYRKKG 127

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
              P  +Q +CGSCWAFS  G LEGQ   K GKLV  S   LV+C K+  GCGG   +  
Sbjct: 128 YVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVKKNDGCGG-GYMTN 186

Query: 447 PIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYFNGSETMKKILYK 504
             EY     G++SEK YPY    GE  +C Y+ S +     G   +     + +KK +  
Sbjct: 187 AFEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAAACKGYKEVQEGNEKALKKAVAL 243

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPI 564
            GP+SVG+++ L  F   +     D+ CS  D+ HAVL VGYG Q    YW+ +NSWG  
Sbjct: 244 VGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEE 303

Query: 565 GPDEGFFKIERGN-NACGIEQIAGYATI 591
             D+G+  + +   NACGI  +A Y  +
Sbjct: 304 WGDKGYILMAKDKGNACGIANLASYPVM 331



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 137/267 (51%), Gaps = 19/267 (7%)

Query: 696 SEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP--VPDAWDWRKKN 752
           ++  D + EE++   TG K         +  R K   +  E +K  P  VPD+ D+RKK 
Sbjct: 78  NQLGDMTSEEVVRTMTGLK---------IHKRNKPTNLTFEHDK-APEKVPDSIDYRKKG 127

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
              P  +Q +CGSCWAFS  G LEGQ   K GKLV  S   LV+C K+  GC G +   +
Sbjct: 128 YVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVKKNDGCGGGYMTNA 187

Query: 813 IEYTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKY 870
            EY     G++SEK YPY    GE  +C Y+ S +     G   +     + +KK +   
Sbjct: 188 FEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAAACKGYKEVQEGNEKALKKAVALV 244

Query: 871 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 930
           GP+SV +++ L      +     D+ CS  D+ HAVL VGYG Q    YW+V+NSWG   
Sbjct: 245 GPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEEW 304

Query: 931 PDEGFFKIERGN-NACGIEQIAGYATI 956
            D+G+  + +   NACGI  +A Y  +
Sbjct: 305 GDKGYILMAKDKGNACGIANLASYPVM 331



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   K GKLV  S   LV+C K+ 
Sbjct: 117 VPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVKKN 176

Query: 71  SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFNG 128
            GC G +   + EY     G++SEK YPY    GE  +C Y+ S +     G   +    
Sbjct: 177 DGCGGGYMTNAFEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAAACKGYKEVQEGN 233

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 188
            + +KK +   GP+SV +++ L      +     D+ CS  D+ HAVL VGYG Q    Y
Sbjct: 234 EKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKY 293

Query: 189 WLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
           W+V+NSWG    D+G+  + +   NACGI  +A Y  +
Sbjct: 294 WIVKNSWGEEWGDKGYILMAKDKGNACGIANLASYPVM 331



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAG 1020
            D+ CS  D+ HAVL VGYG Q    YW+V+NSWG    D+G+  + +   NACGI  +A 
Sbjct: 268  DKDCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEEWGDKGYILMAKDKGNACGIANLAS 327

Query: 1021 YATI 1024
            Y  +
Sbjct: 328  YPVM 331


>gi|401419663|ref|XP_003874321.1| cysteine peptidase A (CBA) [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|1706259|sp|P35591.2|CYSP1_LEIPI RecName: Full=Cysteine proteinase 1; AltName: Full=Amastigote
           cysteine proteinase A-1; Flags: Precursor
 gi|1220383|gb|AAA91859.1| cysteine proteinase [Leishmania pifanoi]
 gi|322490556|emb|CBZ25817.1| cysteine peptidase A (CBA) [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 354

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 156/341 (45%), Gaps = 33/341 (9%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 685
           VV     L  +     DN      + +F  + G+ +  D E   RF  FKQ+        
Sbjct: 18  VVCYGSALIAQTPPPVDNFVASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLN 77

Query: 686 GHKKHERYGTS-EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPD 744
               H  Y  S +F+D +P+E         +   Y R + D ++      +V  D   P 
Sbjct: 78  TQNPHAHYDVSGKFADLTPQEF---AKLYLNPDYYARHLKDHKE------DVHVDDSAPS 128

Query: 745 ---AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
              + DWR K    P  +Q  CGSCWAFS  G +EGQ+A     LV  S+  LV C    
Sbjct: 129 GVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCDNID 188

Query: 802 SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHF 857
            GC+G   + ++ +   +H   + +E  YPY +  G +  C +D+ +V    TG  FL  
Sbjct: 189 EGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPC-HDEGEVGAKITG--FLSL 245

Query: 858 -NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
            +  E + + + K GP++V +++     Y G  +      C  + L H VL+VG+ K   
Sbjct: 246 PHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVV----SLCLAWSLNHGVLIVGFNKNAK 301

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 957
            PYW+V+NSWG    ++G+ ++  G+N C ++     AT++
Sbjct: 302 PPYWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNYPVSATVE 342



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 28/339 (8%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 319
           VV     L  +     DN      + +F  + G+ +  D E   RF  FKQ+        
Sbjct: 18  VVCYGSALIAQTPPPVDNFVASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLN 77

Query: 320 GHKKHERYGTS-EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPD 378
               H  Y  S +F+D +P+E         +   Y R + D ++      +V  D   P 
Sbjct: 78  TQNPHAHYDVSGKFADLTPQEF---AKLYLNPDYYARHLKDHKE------DVHVDDSAPS 128

Query: 379 ---AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
              + DWR K    P  +Q  CGSCWAFS  G +EGQ+A     LV  S+  LV C    
Sbjct: 129 GVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCDNID 188

Query: 436 SGCGG--CDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN 493
            GC G   D     I  +H   + +E  YPY +G G +  C +D+ +V           +
Sbjct: 189 EGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPC-HDEGEVGAKITGFLSLPH 247

Query: 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIP 553
             E + + + K GP++V +++     Y G  +      C  + L H VL+VG+ K    P
Sbjct: 248 DEERIAEWVEKRGPVAVAVDATTWQLYFGGVV----SLCLAWSLNHGVLIVGFNKNAKPP 303

Query: 554 YWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 592
           YW+ +NSWG    ++G+ ++  G+N C ++     AT++
Sbjct: 304 YWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNYPVSATVE 342



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 12/216 (5%)

Query: 16  DWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 75
           DWR K    P  +Q  CGSCWAFS  G +EGQ+A     LV  S+  LV C     GC+G
Sbjct: 134 DWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCDNIDEGCNG 193

Query: 76  CFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHF-NGSE 130
              + ++ +   +H   + +E  YPY +  G +  C +D+ +V    TG  FL   +  E
Sbjct: 194 GLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPC-HDEGEVGAKITG--FLSLPHDEE 250

Query: 131 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 190
            + + + K GP++V +++     Y G  +      C  + L H VL+VG+ K    PYW+
Sbjct: 251 RIAEWVEKRGPVAVAVDATTWQLYFGGVV----SLCLAWSLNHGVLIVGFNKNAKPPYWI 306

Query: 191 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 226
           V+NSWG    ++G+ ++  G+N C ++     AT++
Sbjct: 307 VKNSWGSSWGEKGYIRLAMGSNQCMLKNYPVSATVE 342



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C  + L H VL+VG+ K    PYW+V+NSWG    ++G+ ++  G+N C ++     AT+
Sbjct: 282  CLAWSLNHGVLIVGFNKNAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNYPVSATV 341

Query: 1025 D 1025
            +
Sbjct: 342  E 342


>gi|40806498|gb|AAR92154.1| putative cysteine protease 1 [Iris x hollandica]
          Length = 340

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 151/325 (46%), Gaps = 37/325 (11%)

Query: 650 DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-------KHE-RYGTSEFSDR 701
           +N+++LE  + ++ + GR Y N  E   RFE F+ +  +        H+ + G ++F+D 
Sbjct: 33  ENKSMLERHEQWMAQHGRVYKNAAEKAHRFEIFRANVERIESFNAENHKFKLGVNQFADL 92

Query: 702 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
           + EE   +   K S+    +             + E    VP   DWR K    P  DQ 
Sbjct: 93  TNEEFKTRNTLKPSKMASTKS-----------FKYENVTAVPATMDWRTKGAVTPIKDQG 141

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSIEY-THQ 818
            CGSCWAFS     EG   + TGKL+  S+ ++V+C       GC+G   + + EY    
Sbjct: 142 QCGSCWAFSAVAATEGITKLSTGKLISLSEQEVVDCDVTSDDQGCNGGEMDDAFEYIIKN 201

Query: 819 AGLESEKDYPYKNANGEKFKCAYDK--SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVL 876
            G+ +E +YPYK A+G    C   K  S     TG + +  N    + K      P++V 
Sbjct: 202 KGITTEANYPYKAADG---TCNTKKAASHAASITGYEDVTVNSEAALLKAAANQ-PIAVA 257

Query: 877 LNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEG 934
           +++ D       + +   D  C   DL H V LVGYG   D   YWLV+NSWG    ++G
Sbjct: 258 IDAGDFAFQMYSSGVFTGD--CGT-DLDHGVTLVGYGATSDGTKYWLVKNSWGTSWGEDG 314

Query: 935 FFKIERGNNA----CGIEQIAGYAT 955
           + ++ER  +A    CGI   A Y T
Sbjct: 315 YIRMERDVDAKEGLCGIAMDASYPT 339



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 150/326 (46%), Gaps = 38/326 (11%)

Query: 284 DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-------KHE-RYGTSEFSDR 335
           +N+++LE  + ++ + GR Y N  E   RFE F+ +  +        H+ + G ++F+D 
Sbjct: 33  ENKSMLERHEQWMAQHGRVYKNAAEKAHRFEIFRANVERIESFNAENHKFKLGVNQFADL 92

Query: 336 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
           + EE   +   K S+    +             + E    VP   DWR K    P  DQ 
Sbjct: 93  TNEEFKTRNTLKPSKMASTKS-----------FKYENVTAVPATMDWRTKGAVTPIKDQG 141

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEY-TH 452
            CGSCWAFS     EG   + TGKL+  S+ ++V+C    S   GC+G  ++   EY   
Sbjct: 142 QCGSCWAFSAVAATEGITKLSTGKLISLSEQEVVDC-DVTSDDQGCNGGEMDDAFEYIIK 200

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDK--SKVKLFTGKDFLYFNGSETMKKILYKYGPLSV 510
             G+ +E +YPY+  +G    C   K  S     TG + +  N    + K      P++V
Sbjct: 201 NKGITTEANYPYKAADG---TCNTKKAASHAASITGYEDVTVNSEAALLKAAANQ-PIAV 256

Query: 511 GLNSHLIHF-YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIGPDE 568
            +++    F    + +   D  C   DL H V LVGYG   D   YWL +NSWG    ++
Sbjct: 257 AIDAGDFAFQMYSSGVFTGD--CGT-DLDHGVTLVGYGATSDGTKYWLVKNSWGTSWGED 313

Query: 569 GFFKIERGNNA----CGIEQIAGYAT 590
           G+ ++ER  +A    CGI   A Y T
Sbjct: 314 GYIRMERDVDAKEGLCGIAMDASYPT 339



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 109/226 (48%), Gaps = 18/226 (7%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC--A 67
            VP   DWR K    P  DQ  CGSCWAFS     EG   + TGKL+  S+ ++V+C   
Sbjct: 121 AVPATMDWRTKGAVTPIKDQGQCGSCWAFSAVAATEGITKLSTGKLISLSEQEVVDCDVT 180

Query: 68  KQCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDK--SKVKLFTGKDFL 124
               GC+G   + + EY     G+ +E +YPYK A+G    C   K  S     TG + +
Sbjct: 181 SDDQGCNGGEMDDAFEYIIKNKGITTEANYPYKAADG---TCNTKKAASHAASITGYEDV 237

Query: 125 HFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-K 182
             N    + K      P++V +++ D       + +   D  C   DL H V LVGYG  
Sbjct: 238 TVNSEAALLKAAANQ-PIAVAIDAGDFAFQMYSSGVFTGD--CGT-DLDHGVTLVGYGAT 293

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYAT 224
            D   YWLV+NSWG    ++G+ ++ER  +A    CGI   A Y T
Sbjct: 294 SDGTKYWLVKNSWGTSWGEDGYIRMERDVDAKEGLCGIAMDASYPT 339



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 5/60 (8%)

Query: 969  DLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYAT 1023
            DL H V LVGYG   D   YWLV+NSWG    ++G+ ++ER  +A    CGI   A Y T
Sbjct: 280  DLDHGVTLVGYGATSDGTKYWLVKNSWGTSWGEDGYIRMERDVDAKEGLCGIAMDASYPT 339


>gi|224049669|ref|XP_002196637.1| PREDICTED: cathepsin O [Taeniopygia guttata]
          Length = 299

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 135/260 (51%), Gaps = 21/260 (8%)

Query: 693 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
           YG ++FS   PEE          +  Y R +  +     + +   K+ P+P  +DWR K 
Sbjct: 47  YGINQFSHLFPEEF---------KAIYLRSIPHKLP-RYIKVPKGKEKPLPKKFDWRDKK 96

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS 812
           V     +Q  CG CWAFS+ G +E  YAIK   L E S  Q+++C+    GC+G     +
Sbjct: 97  VIAEVRNQQTCGGCWAFSVVGGIESAYAIKRNTLEELSVQQVIDCSYNNYGCNGGSTVSA 156

Query: 813 IEYTHQAGLESEKD--YPYKNANGEKFKCAY-DKSKVKL-FTGKDFLHFNGS-ETMKKIL 867
           + + +Q  ++  +D  Y +K   G    C Y ++S   +  TG     F+G  E M ++L
Sbjct: 157 LSWLNQTKVKLVRDSEYTFKAQTG---LCHYFERSDFGVSITGFAAYDFSGQEEEMMRML 213

Query: 868 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927
             +GPL+V +++    DY G  I+ +   CS     HAVL+ G+ +  +IPYW+V+NSWG
Sbjct: 214 VSWGPLAVTVDAVSWQDYLGGIIQYH---CSSGRANHAVLITGFDRTGSIPYWIVQNSWG 270

Query: 928 PIGPDEGFFKIERGNNACGI 947
           P    +G+ +++ G N CGI
Sbjct: 271 PTWGIDGYVRVKMGGNVCGI 290



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 119/215 (55%), Gaps = 11/215 (5%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           K+ P+P  +DWR K V     +Q  CG CWAFS+ G +E  YAIK   L E S  Q+++C
Sbjct: 82  KEKPLPKKFDWRDKKVIAEVRNQQTCGGCWAFSVVGGIESAYAIKRNTLEELSVQQVIDC 141

Query: 67  AKQCSGCDGCFFEPSIEYTHQAGLESEKD--YPYKNANGEKFKCAY-DKSKVKL-FTGKD 122
           +    GC+G     ++ + +Q  ++  +D  Y +K   G    C Y ++S   +  TG  
Sbjct: 142 SYNNYGCNGGSTVSALSWLNQTKVKLVRDSEYTFKAQTG---LCHYFERSDFGVSITGFA 198

Query: 123 FLHFNGS-ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
              F+G  E M ++L  +GPL+V +++    DY G  I+ +   CS     HAVL+ G+ 
Sbjct: 199 AYDFSGQEEEMMRMLVSWGPLAVTVDAVSWQDYLGGIIQYH---CSSGRANHAVLITGFD 255

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           +  +IPYW+V+NSWGP    +G+ +++ G N CGI
Sbjct: 256 RTGSIPYWIVQNSWGPTWGIDGYVRVKMGGNVCGI 290



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 127/258 (49%), Gaps = 16/258 (6%)

Query: 327 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
           YG ++FS   PEE          +  Y R +  +     + +   K+ P+P  +DWR K 
Sbjct: 47  YGINQFSHLFPEEF---------KAIYLRSIPHKLP-RYIKVPKGKEKPLPKKFDWRDKK 96

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQ 446
           V     +Q  CG CWAFS+ G +E  YAIK   L E S  Q+++C+    GC G   +  
Sbjct: 97  VIAEVRNQQTCGGCWAFSVVGGIESAYAIKRNTLEELSVQQVIDCSYNNYGCNGGSTVS- 155

Query: 447 PIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGS-ETMKKILYK 504
            + + +Q  ++  +D  Y           +++S   +  TG     F+G  E M ++L  
Sbjct: 156 ALSWLNQTKVKLVRDSEYTFKAQTGLCHYFERSDFGVSITGFAAYDFSGQEEEMMRMLVS 215

Query: 505 YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPI 564
           +GPL+V +++     Y G  I+ +   CS     HAVL+ G+ +   IPYW+ +NSWGP 
Sbjct: 216 WGPLAVTVDAVSWQDYLGGIIQYH---CSSGRANHAVLITGFDRTGSIPYWIVQNSWGPT 272

Query: 565 GPDEGFFKIERGNNACGI 582
              +G+ +++ G N CGI
Sbjct: 273 WGIDGYVRVKMGGNVCGI 290



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 33/51 (64%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS     HAVL+ G+ +   IPYW+V+NSWGP    +G+ +++ G N CGI
Sbjct: 240  CSSGRANHAVLITGFDRTGSIPYWIVQNSWGPTWGIDGYVRVKMGGNVCGI 290


>gi|308322281|gb|ADO28278.1| cathepsin L [Ictalurus furcatus]
          Length = 359

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 173/364 (47%), Gaps = 37/364 (10%)

Query: 634 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK----- 688
           VV  +  LA   SL  D E     F+ +  K G+ Y + EE  +R + + Q+ HK     
Sbjct: 6   VVTALMALANVDSLPLDIE-----FQEWKQKFGKIYKSVEEESQRKKTW-QENHKLVMNH 59

Query: 689 --------KHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 740
                   K  R G + F+D S +E   ++ FK    ++ R +         L +V   G
Sbjct: 60  NILADKGIKSYRLGMNYFADMSNQEYR-QSVFK-GCLSFNRTL--NHSAATFLRQV--GG 113

Query: 741 P-VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 799
           P +P+  +W +        +Q  C SCWAFS  G LEGQ   KTGKLV  SK QLV+C+K
Sbjct: 114 PALPNTVNWTQMGYVTEVEEQKQCNSCWAFSATGALEGQTFKKTGKLVSLSKQQLVDCSK 173

Query: 800 QC--SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFL 855
           +   +GC G     + EY  +  GL +E+ YPY+  +G    C  +   V +  TG   +
Sbjct: 174 KFGNNGCKGGLMNWAFEYVKENGGLHTEESYPYEAKDGS---CRDNLGTVGVTCTGHVQI 230

Query: 856 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 915
           +      +++ +   GP+SV ++++            ++  CS  D+ H VL VGYG  D
Sbjct: 231 NSEDENALQEAVATIGPISVAIDANHTSFQLYESGLYDEPDCSCTDMNHGVLAVGYGTDD 290

Query: 916 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVVKNDETCSPYDLGHAV 974
              YWL++NSWG    D+G+ K+ R  NN CGI   A Y    +V N   C   D   ++
Sbjct: 291 GKDYWLIKNSWGINWGDKGYIKMSRNKNNQCGIATAASYP---LVINKTQCVQCDACSSI 347

Query: 975 LLVG 978
            ++G
Sbjct: 348 FVLG 351



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 162/343 (47%), Gaps = 35/343 (10%)

Query: 268 VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK----- 322
           VV  +  LA   SL  D E     F+ +  K G+ Y + EE  +R + + Q+ HK     
Sbjct: 6   VVTALMALANVDSLPLDIE-----FQEWKQKFGKIYKSVEEESQRKKTW-QENHKLVMNH 59

Query: 323 --------KHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 374
                   K  R G + F+D S +E   ++ FK    ++ R +         L +V   G
Sbjct: 60  NILADKGIKSYRLGMNYFADMSNQEYR-QSVFK-GCLSFNRTL--NHSAATFLRQV--GG 113

Query: 375 P-VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK 433
           P +P+  +W +        +Q  C SCWAFS  G LEGQ   KTGKLV  SK QLV+C+K
Sbjct: 114 PALPNTVNWTQMGYVTEVEEQKQCNSCWAFSATGALEGQTFKKTGKLVSLSKQQLVDCSK 173

Query: 434 QCSGCGGCDG--LEQPIEYTHQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDF 489
           +  G  GC G  +    EY  +  GL +E+ YPY   +G    C  +   V +  TG   
Sbjct: 174 K-FGNNGCKGGLMNWAFEYVKENGGLHTEESYPYEAKDGS---CRDNLGTVGVTCTGHVQ 229

Query: 490 LYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           +       +++ +   GP+SV ++++   F        ++  CS  D+ H VL VGYG  
Sbjct: 230 INSEDENALQEAVATIGPISVAIDANHTSFQLYESGLYDEPDCSCTDMNHGVLAVGYGTD 289

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           D   YWL +NSWG    D+G+ K+ R  NN CGI   A Y  +
Sbjct: 290 DGKDYWLIKNSWGINWGDKGYIKMSRNKNNQCGIATAASYPLV 332



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 9   GP-VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           GP +P+  +W +        +Q  C SCWAFS  G LEGQ   KTGKLV  SK QLV+C+
Sbjct: 113 GPALPNTVNWTQMGYVTEVEEQKQCNSCWAFSATGALEGQTFKKTGKLVSLSKQQLVDCS 172

Query: 68  KQC--SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 123
           K+   +GC G     + EY  +  GL +E+ YPY+  +G    C  +   V +  TG   
Sbjct: 173 KKFGNNGCKGGLMNWAFEYVKENGGLHTEESYPYEAKDGS---CRDNLGTVGVTCTGHVQ 229

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           ++      +++ +   GP+SV ++++            ++  CS  D+ H VL VGYG  
Sbjct: 230 INSEDENALQEAVATIGPISVAIDANHTSFQLYESGLYDEPDCSCTDMNHGVLAVGYGTD 289

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           D   YWL++NSWG    D+G+ K+ R  NN CGI   A Y  +
Sbjct: 290 DGKDYWLIKNSWGINWGDKGYIKMSRNKNNQCGIATAASYPLV 332



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 1023
            CS  D+ H VL VGYG  D   YWL++NSWG    D+G+ K+ R  NN CGI   A Y  
Sbjct: 272  CSCTDMNHGVLAVGYGTDDGKDYWLIKNSWGINWGDKGYIKMSRNKNNQCGIATAASYPL 331

Query: 1024 I 1024
            +
Sbjct: 332  V 332


>gi|403364285|gb|EJY81901.1| Cathepsin H [Oxytricha trifallax]
          Length = 363

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 131/275 (47%), Gaps = 30/275 (10%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM----------LMEVEKDGPVP 743
           G ++FSD + EE            ++ R+   RE  E+           L  + KD  +P
Sbjct: 89  GFNQFSDMTSEEFF----------SFYRLDEQRENAEQQCSATRAEAVDLSHIVKD--LP 136

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS- 802
             WDWR+ N   P  DQ +CGSCW FS  G LE  + IK  +    S+ QLV+CA     
Sbjct: 137 ANWDWREHNGVTPVKDQGSCGSCWTFSTVGTLEAHFLIKYQQSRNLSEQQLVDCAGAYDN 196

Query: 803 -GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 860
            GC+G     + +Y +   G+ +E  YPY     +   C   +S+  +      ++   S
Sbjct: 197 YGCNGGLPSHAFQYISDNGGIATEAAYPYF---AKDRPCTIQQSQKSVGVVGGSVNLTKS 253

Query: 861 ETMKKI-LYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
           E    I ++++GP+S+     D   DY+       D    P D+ HAV+ VG+G ++ + 
Sbjct: 254 EDELAIAIFQHGPVSIAYEVIDDFMDYHSGVYTTKDCKNGPDDVNHAVVAVGFGTENGVD 313

Query: 919 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953
           YWLV+NSW     D G+FKI+RG N CGI     Y
Sbjct: 314 YWLVKNSWSTKWGDNGYFKIQRGVNMCGINNCNSY 348



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 119/241 (49%), Gaps = 12/241 (4%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           L  + KD  +P  WDWR+ N   P  DQ  CGSCW FS  G LE  + IK  +    S+ 
Sbjct: 128 LSHIVKD--LPANWDWREHNGVTPVKDQGSCGSCWTFSTVGTLEAHFLIKYQQSRNLSEQ 185

Query: 62  QLVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
           QLV+CA      GC+G     + +Y +   G+ +E  YPY     +   C   +S+  + 
Sbjct: 186 QLVDCAGAYDNYGCNGGLPSHAFQYISDNGGIATEAAYPYF---AKDRPCTIQQSQKSVG 242

Query: 119 TGKDFLHFNGSETMKKI-LYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVL 176
                ++   SE    I ++++GP+S+     D   DY+       D    P D+ HAV+
Sbjct: 243 VVGGSVNLTKSEDELAIAIFQHGPVSIAYEVIDDFMDYHSGVYTTKDCKNGPDDVNHAVV 302

Query: 177 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA--TIDVVIQRLVL 234
            VG+G ++ + YWLV+NSW     D G+FKI+RG N CGI     Y     D+    +VL
Sbjct: 303 AVGFGTENGVDYWLVKNSWSTKWGDNGYFKIQRGVNMCGINNCNSYPQDVTDLTKTEVVL 362

Query: 235 E 235
           +
Sbjct: 363 Q 363



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 134/291 (46%), Gaps = 33/291 (11%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM----------LMEVEKDGPVP 377
           G ++FSD + EE            ++ R+   RE  E+           L  + KD  +P
Sbjct: 89  GFNQFSDMTSEEFF----------SFYRLDEQRENAEQQCSATRAEAVDLSHIVKD--LP 136

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
             WDWR+ N   P  DQ +CGSCW FS  G LE  + IK  +    S+ QLV+CA     
Sbjct: 137 ANWDWREHNGVTPVKDQGSCGSCWTFSTVGTLEAHFLIKYQQSRNLSEQQLVDCAGAYDN 196

Query: 438 CGGCDGL-EQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNG 494
            G   GL     +Y +   G+ +E  YPY     +   C   +S+  +   G        
Sbjct: 197 YGCNGGLPSHAFQYISDNGGIATEAAYPYF---AKDRPCTIQQSQKSVGVVGGSVNLTKS 253

Query: 495 SETMKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI 552
            + +   ++++GP+S+        + +++G    K D    P D+ HAV+ VG+G ++ +
Sbjct: 254 EDELAIAIFQHGPVSIAYEVIDDFMDYHSGVYTTK-DCKNGPDDVNHAVVAVGFGTENGV 312

Query: 553 PYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYA--TIDVVIQRLVLE 601
            YWL +NSW     D G+FKI+RG N CGI     Y     D+    +VL+
Sbjct: 313 DYWLVKNSWSTKWGDNGYFKIQRGVNMCGINNCNSYPQDVTDLTKTEVVLQ 363



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 967  PYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            P D+ HAV+ VG+G ++ + YWLV+NSW     D G+FKI+RG N CGI     Y
Sbjct: 294  PDDVNHAVVAVGFGTENGVDYWLVKNSWSTKWGDNGYFKIQRGVNMCGINNCNSY 348


>gi|198432215|ref|XP_002130162.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 331

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 153/335 (45%), Gaps = 42/335 (12%)

Query: 645 GSLTFDNENILETFKAFIVKRGRQYANDEEIK------ERFEYFKQ-----DGHKKHERY 693
            S+ F NE   E +K      G+ Y  +EE+K      E  +Y  Q     D  K   + 
Sbjct: 16  ASVVFQNE--WEEWKTLY---GKVYRAEEELKRQYIWLENLKYVTQHNLEADEGKHTYKV 70

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE---KMLMEVEKDGPVPDAWDWRK 750
            T++F+D S +E        W E    ++     ++       M V      P   DWRK
Sbjct: 71  DTNQFADLSNDE--------WRELMTSQVTRPTNQMSFCNMTFMTVGDHVIAPKNVDWRK 122

Query: 751 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCF 808
           +    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+ +    GC G  
Sbjct: 123 EGYVTPVKDQKQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSMKEGNHGCQGGL 182

Query: 809 FEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKI 866
            +   EY     G+++E  YPY   N  + +C Y +S      TG   +       + K 
Sbjct: 183 MDLGFEYIFDNGGIDTESSYPYMAKN--EPQCMYKRSNSGATLTGCVDIKRGSESALMKA 240

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKN----DETCSPYDLGHAVLLVGYGKQDNIPYWLV 922
           +   GP+SV +++     +    + K+    + +CS   L H VL VG+G  +   +WLV
Sbjct: 241 VADVGPISVAIDA----GHKSFQMYKSGVYYEPSCSSVKLDHGVLAVGFGADNGEDFWLV 296

Query: 923 RNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           +NSWGPI   EG+  + R  +N CGI   A Y  +
Sbjct: 297 KNSWGPIWGMEGYIMMSRNRDNNCGIATQASYPLV 331



 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 151/332 (45%), Gaps = 35/332 (10%)

Query: 279 GSLTFDNENILETFKAFIVKRGRQYANDEEIK------ERFEYFKQ-----DGHKKHERY 327
            S+ F NE   E +K      G+ Y  +EE+K      E  +Y  Q     D  K   + 
Sbjct: 16  ASVVFQNE--WEEWKTLY---GKVYRAEEELKRQYIWLENLKYVTQHNLEADEGKHTYKV 70

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE---KMLMEVEKDGPVPDAWDWRK 384
            T++F+D S +E        W E    ++     ++       M V      P   DWRK
Sbjct: 71  DTNQFADLSNDE--------WRELMTSQVTRPTNQMSFCNMTFMTVGDHVIAPKNVDWRK 122

Query: 385 KNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG- 443
           +    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+  LV+C+ +  G  GC G 
Sbjct: 123 EGYVTPVKDQKQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSMK-EGNHGCQGG 181

Query: 444 -LEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSETMKK 500
            ++   EY     G+++E  YPY   N  + +C Y +S      TG   +       + K
Sbjct: 182 LMDLGFEYIFDNGGIDTESSYPYMAKN--EPQCMYKRSNSGATLTGCVDIKRGSESALMK 239

Query: 501 ILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNS 560
            +   GP+SV +++    F         + +CS   L H VL VG+G  +   +WL +NS
Sbjct: 240 AVADVGPISVAIDAGHKSFQMYKSGVYYEPSCSSVKLDHGVLAVGFGADNGEDFWLVKNS 299

Query: 561 WGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           WGPI   EG+  + R  +N CGI   A Y  +
Sbjct: 300 WGPIWGMEGYIMMSRNRDNNCGIATQASYPLV 331



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 115/233 (49%), Gaps = 15/233 (6%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
            M V      P   DWRK+    P  DQ  CGSCWAFS  G LEGQ+  KTGKLV  S+ 
Sbjct: 105 FMTVGDHVIAPKNVDWRKEGYVTPVKDQKQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQ 164

Query: 62  QLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KL 117
            LV+C+ +    GC G   +   EY     G+++E  YPY   N  + +C Y +S     
Sbjct: 165 NLVDCSMKEGNHGCQGGLMDLGFEYIFDNGGIDTESSYPYMAKN--EPQCMYKRSNSGAT 222

Query: 118 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETCSPYDLGH 173
            TG   +       + K +   GP+SV +++     +    + K+    + +CS   L H
Sbjct: 223 LTGCVDIKRGSESALMKAVADVGPISVAIDA----GHKSFQMYKSGVYYEPSCSSVKLDH 278

Query: 174 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            VL VG+G  +   +WLV+NSWGPI   EG+  + R  +N CGI   A Y  +
Sbjct: 279 GVLAVGFGADNGEDFWLVKNSWGPIWGMEGYIMMSRNRDNNCGIATQASYPLV 331



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 16/107 (14%)

Query: 934  GFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLLVG 978
            G   I+RG+ +  ++ +A    I V               V  + +CS   L H VL VG
Sbjct: 225  GCVDIKRGSESALMKAVADVGPISVAIDAGHKSFQMYKSGVYYEPSCSSVKLDHGVLAVG 284

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            +G  +   +WLV+NSWGPI   EG+  + R  +N CGI   A Y  +
Sbjct: 285  FGADNGEDFWLVKNSWGPIWGMEGYIMMSRNRDNNCGIATQASYPLV 331


>gi|6630972|gb|AAF19630.1|AF194426_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  137 bits (346), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 18/300 (6%)

Query: 663 VKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 722
           V R R + ++ +I ++       G   + R G + ++D   EE +     K S    +  
Sbjct: 37  VLRKRVWESNLQIVQQHNVLADQGQANY-RLGMNTYADLYNEEFM---ALKGSSGILQAK 92

Query: 723 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 782
                +  K L+ V     +P + DWR +    P  DQ  CGSCW+FS  G LEGQ+  K
Sbjct: 93  DQSSTQTFKPLVGVT----LPSSVDWRNQGYVTPVKDQGQCGSCWSFSATGSLEGQHFAK 148

Query: 783 TGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKC 839
           TG LV  S+ QLV+C+      GC G   E + +Y   A G++ E  YPY   NG   +C
Sbjct: 149 TGTLVSLSEQQLVDCSWSYGNYGCSGGLMESAYDYIRDAGGVQLESAYPYTAQNG---RC 205

Query: 840 AYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET-C 897
            +D+SK V   TG   +     +++ + +   GP++V +++   +D+        D + C
Sbjct: 206 HFDQSKAVATCTGHVAIPSGDEQSLMQAVGTVGPVAVAIDASG-YDFQLYESGVYDRSRC 264

Query: 898 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 956
           S   L H VL  GYG +    YWLV+NSWGP    +G+ K+ R  +N CGI  +A Y  +
Sbjct: 265 SSSSLDHGVLAAGYGTEGGNDYWLVKNSWGPGWGAQGYIKMSRNKSNQCGIATMACYPLV 324



 Score =  136 bits (343), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 81/221 (36%), Positives = 118/221 (53%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P + DWR +    P  DQ  CGSCW+FS  G LEGQ+  KTG LV  S+ QLV+C+   
Sbjct: 108 LPSSVDWRNQGYVTPVKDQGQCGSCWSFSATGSLEGQHFAKTGTLVSLSEQQLVDCSWSY 167

Query: 71  S--GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHF 126
              GC G   E + +Y   A G++ E  YPY   NG   +C +D+SK V   TG   +  
Sbjct: 168 GNYGCSGGLMESAYDYIRDAGGVQLESAYPYTAQNG---RCHFDQSKAVATCTGHVAIPS 224

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDN 185
              +++ + +   GP++V +++   +D+        D + CS   L H VL  GYG +  
Sbjct: 225 GDEQSLMQAVGTVGPVAVAIDASG-YDFQLYESGVYDRSRCSSSSLDHGVLAAGYGTEGG 283

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
             YWLV+NSWGP    +G+ K+ R  +N CGI  +A Y  +
Sbjct: 284 NDYWLVKNSWGPGWGAQGYIKMSRNKSNQCGIATMACYPLV 324



 Score =  134 bits (337), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 95/300 (31%), Positives = 144/300 (48%), Gaps = 17/300 (5%)

Query: 297 VKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 356
           V R R + ++ +I ++       G   + R G + ++D   EE +     K S    +  
Sbjct: 37  VLRKRVWESNLQIVQQHNVLADQGQANY-RLGMNTYADLYNEEFM---ALKGSSGILQAK 92

Query: 357 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIK 416
                +  K L+ V     +P + DWR +    P  DQ  CGSCW+FS  G LEGQ+  K
Sbjct: 93  DQSSTQTFKPLVGVT----LPSSVDWRNQGYVTPVKDQGQCGSCWSFSATGSLEGQHFAK 148

Query: 417 TGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFK 473
           TG LV  S+ QLV+C+    G  GC G  +E   +Y   A G++ E  YPY   NG   +
Sbjct: 149 TGTLVSLSEQQLVDCS-WSYGNYGCSGGLMESAYDYIRDAGGVQLESAYPYTAQNG---R 204

Query: 474 CAYDKSK-VKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETC 532
           C +D+SK V   TG   +     +++ + +   GP++V +++    F        +   C
Sbjct: 205 CHFDQSKAVATCTGHVAIPSGDEQSLMQAVGTVGPVAVAIDASGYDFQLYESGVYDRSRC 264

Query: 533 SPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 591
           S   L H VL  GYG +    YWL +NSWGP    +G+ K+ R  +N CGI  +A Y  +
Sbjct: 265 SSSSLDHGVLAAGYGTEGGNDYWLVKNSWGPGWGAQGYIKMSRNKSNQCGIATMACYPLV 324



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V +   CS   L H VL  GYG +    YWLV+NSWGP    +G+ K+ R  +N CGI  
Sbjct: 258  VYDRSRCSSSSLDHGVLAAGYGTEGGNDYWLVKNSWGPGWGAQGYIKMSRNKSNQCGIAT 317

Query: 1018 IAGYATI 1024
            +A Y  +
Sbjct: 318  MACYPLV 324


>gi|255211|gb|AAB23202.1| cathepsin S [cattle, spleen, Peptide Partial, 217 aa]
 gi|227966|prf||1714236A cathepsin S
          Length = 217

 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 121/222 (54%), Gaps = 11/222 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +PD+ DWR+K        Q ACGSCWAFS  G LE Q  +KTGKLV  S   LV+C+   
Sbjct: 1   LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 60

Query: 436 SGCGGCDG--LEQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLY 491
            G  GC+G  + +  +Y     G++SE  YPY+  +G   KC YD K++    +    L 
Sbjct: 61  YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDG---KCQYDVKNRAATCSRYIELP 117

Query: 492 FNGSETMKKILYKYGPLSVGLN-SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 550
           F   E +K+ +   GP+SVG++ SH   F   T +   D +C+  ++ H VL+VGYG  D
Sbjct: 118 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYY-DPSCTQ-NVNHGVLVVGYGNLD 175

Query: 551 DIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
              YWL +NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 176 GKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSYPEI 217



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 117/221 (52%), Gaps = 10/221 (4%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 800
           +PD+ DWR+K        Q ACGSCWAFS  G LE Q  +KTGKLV  S   LV+C+   
Sbjct: 1   LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 60

Query: 801 --CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLH 856
               GC+G F   + +Y     G++SE  YPYK  +G   KC YD K++    +    L 
Sbjct: 61  YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDG---KCQYDVKNRAATCSRYIELP 117

Query: 857 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
           F   E +K+ +   GP+SV +++     +        D +C+  ++ H VL+VGYG  D 
Sbjct: 118 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGNLDG 176

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
             YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 177 KDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSYPEI 217



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD+ DWR+K        Q  CGSCWAFS  G LE Q  +KTGKLV  S   LV+C+   
Sbjct: 1   LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 60

Query: 70  --CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLH 125
               GC+G F   + +Y     G++SE  YPYK  +G   KC YD K++    +    L 
Sbjct: 61  YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDG---KCQYDVKNRAATCSRYIELP 117

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           F   E +K+ +   GP+SV +++     +        D +C+  ++ H VL+VGYG  D 
Sbjct: 118 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGNLDG 176

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 177 KDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSYPEI 217



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAG 1020
            D +C+  ++ H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R + N CGI     
Sbjct: 155  DPSCTQ-NVNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPS 213

Query: 1021 YATI 1024
            Y  I
Sbjct: 214  YPEI 217


>gi|55740406|gb|AAV63979.1| cathepsin L1 precursor [Artemia parthenogenetica]
          Length = 338

 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 161/333 (48%), Gaps = 25/333 (7%)

Query: 275 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSD 334
           + +  +L+  N  + + +  F     ++Y +  E K R + + ++ HK  +     E  +
Sbjct: 15  VQLSAALSLTNL-LADEWHLFKATHKKEYPSQLEEKLRMKIYLENKHKVAKHNILYEKGE 73

Query: 335 RSPEEILCKTG------FKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNV 387
           +S +  + K G      F+     Y+    +  + E     +E  +  VP++ DWR+K  
Sbjct: 74  KSYQVAMNKFGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGA 133

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LE 445
             P  DQ  CGSCWAFS  G LEGQ   KTGKLV  S+  L++C+ +  G  GC+G  ++
Sbjct: 134 ITPVKDQGQCGSCWAFSSTGALEGQTFRKTGKLVSLSEQNLIDCSGKY-GNEGCNGGLMD 192

Query: 446 QPIEYTH-QAGLESEKDYPYRNGNG-----EKFKCAYDKSKVKLFTGKDFLYFNGSETMK 499
           Q  +Y     G+++E  YPY   +G      + + A D+  V + +G++       + +K
Sbjct: 193 QAFQYIKDNKGIDTENTYPYEAEDGVCRYNPRNRGAVDRGFVDIPSGEE-------DKLK 245

Query: 500 KILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARN 559
             +   GP+SV +++    F   +     + +C   DL H VL+VGYG  +   YWL +N
Sbjct: 246 AAVATVGPVSVAIDASHESFQFYSKGXYYEPSCDSDDLDHGVLVVGYGSDNGEDYWLVKN 305

Query: 560 SWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 591
           SW     DEG+ KI R   N CG+   A Y  +
Sbjct: 306 SWSEHWGDEGYIKIARNRKNHCGVATAASYPLV 338



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 160/332 (48%), Gaps = 24/332 (7%)

Query: 641 LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSD 700
           + +  +L+  N  + + +  F     ++Y +  E K R + + ++ HK  +     E  +
Sbjct: 15  VQLSAALSLTNL-LADEWHLFKATHKKEYPSQLEEKLRMKIYLENKHKVAKHNILYEKGE 73

Query: 701 RSPEEILCKTG------FKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNV 753
           +S +  + K G      F+     Y+    +  + E     +E  +  VP++ DWR+K  
Sbjct: 74  KSYQVAMNKFGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGA 133

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEP 811
             P  DQ  CGSCWAFS  G LEGQ   KTGKLV  S+  L++C+ +    GC+G   + 
Sbjct: 134 ITPVKDQGQCGSCWAFSSTGALEGQTFRKTGKLVSLSEQNLIDCSGKYGNEGCNGGLMDQ 193

Query: 812 SIEYTH-QAGLESEKDYPYKNANG-----EKFKCAYDKSKVKLFTGKDFLHFNGSETMKK 865
           + +Y     G+++E  YPY+  +G      + + A D+  V + +G++       + +K 
Sbjct: 194 AFQYIKDNKGIDTENTYPYEAEDGVCRYNPRNRGAVDRGFVDIPSGEE-------DKLKA 246

Query: 866 ILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNS 925
            +   GP+SV +++        +     + +C   DL H VL+VGYG  +   YWLV+NS
Sbjct: 247 AVATVGPVSVAIDASHESFQFYSKGXYYEPSCDSDDLDHGVLVVGYGSDNGEDYWLVKNS 306

Query: 926 WGPIGPDEGFFKIERGN-NACGIEQIAGYATI 956
           W     DEG+ KI R   N CG+   A Y  +
Sbjct: 307 WSEHWGDEGYIKIARNRKNHCGVATAASYPLV 338



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 118/224 (52%), Gaps = 16/224 (7%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           VP++ DWR+K    P  DQ  CGSCWAFS  G LEGQ   KTGKLV  S+  L++C+ + 
Sbjct: 122 VPESVDWREKGAITPVKDQGQCGSCWAFSSTGALEGQTFRKTGKLVSLSEQNLIDCSGKY 181

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-----EKFKCAYDKSKVKLFTGKD 122
              GC+G   + + +Y     G+++E  YPY+  +G      + + A D+  V + +G++
Sbjct: 182 GNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDGVCRYNPRNRGAVDRGFVDIPSGEE 241

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
                  + +K  +   GP+SV +++        +     + +C   DL H VL+VGYG 
Sbjct: 242 -------DKLKAAVATVGPVSVAIDASHESFQFYSKGXYYEPSCDSDDLDHGVLVVGYGS 294

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
            +   YWLV+NSW     DEG+ KI R   N CG+   A Y  +
Sbjct: 295 DNGEDYWLVKNSWSEHWGDEGYIKIARNRKNHCGVATAASYPLV 338



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYA 1022
            +C   DL H VL+VGYG  +   YWLV+NSW     DEG+ KI R   N CG+   A Y 
Sbjct: 277  SCDSDDLDHGVLVVGYGSDNGEDYWLVKNSWSEHWGDEGYIKIARNRKNHCGVATAASYP 336

Query: 1023 TI 1024
             +
Sbjct: 337  LV 338


>gi|118404242|ref|NP_001072435.1| cathepsin K precursor [Xenopus (Silurana) tropicalis]
 gi|113197688|gb|AAI21683.1| hypothetical protein MGC147539 [Xenopus (Silurana) tropicalis]
          Length = 331

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/220 (40%), Positives = 123/220 (55%), Gaps = 9/220 (4%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           +PD+ D+RKK    P  +Q +CGSCWAFS  G LEGQ   K GKLV+ S   LV+C K+ 
Sbjct: 117 IPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVDLSPQNLVDCVKKN 176

Query: 436 SGCGGCDGLEQPIEYTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN- 493
            GCGG   +    EY     G++SE  YPY    GE  +C Y+ +  K  + K F     
Sbjct: 177 DGCGG-GYMTNAFEYVRDNKGIDSENAYPYV---GEDQECMYNATG-KAASCKGFKEVQE 231

Query: 494 GSE-TMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI 552
           GSE  +KK +   GP+SVG+++ L  F   +     D+ C+  ++ HAVL VGYG Q   
Sbjct: 232 GSEKALKKAVGLVGPVSVGIDAGLSSFQFYSKGVYYDKDCNAENINHAVLAVGYGTQKKT 291

Query: 553 PYWLARNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 591
            YW+ +NSWG    ++G+  + R  +NACGI  +A Y  +
Sbjct: 292 KYWIVKNSWGEDWGNKGYILMAREKDNACGISSLASYPVM 331



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 122/219 (55%), Gaps = 8/219 (3%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           +PD+ D+RKK    P  +Q +CGSCWAFS  G LEGQ   K GKLV+ S   LV+C K+ 
Sbjct: 117 IPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVDLSPQNLVDCVKKN 176

Query: 802 SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-G 859
            GC G +   + EY     G++SE  YPY    GE  +C Y+ +  K  + K F     G
Sbjct: 177 DGCGGGYMTNAFEYVRDNKGIDSENAYPYV---GEDQECMYNATG-KAASCKGFKEVQEG 232

Query: 860 SE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 918
           SE  +KK +   GP+SV +++ L      +     D+ C+  ++ HAVL VGYG Q    
Sbjct: 233 SEKALKKAVGLVGPVSVGIDAGLSSFQFYSKGVYYDKDCNAENINHAVLAVGYGTQKKTK 292

Query: 919 YWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 956
           YW+V+NSWG    ++G+  + R  +NACGI  +A Y  +
Sbjct: 293 YWIVKNSWGEDWGNKGYILMAREKDNACGISSLASYPVM 331



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 121/219 (55%), Gaps = 8/219 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +PD+ D+RKK    P  +Q  CGSCWAFS  G LEGQ   K GKLV+ S   LV+C K+ 
Sbjct: 117 IPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVDLSPQNLVDCVKKN 176

Query: 71  SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-G 128
            GC G +   + EY     G++SE  YPY    GE  +C Y+ +  K  + K F     G
Sbjct: 177 DGCGGGYMTNAFEYVRDNKGIDSENAYPYV---GEDQECMYNATG-KAASCKGFKEVQEG 232

Query: 129 SE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
           SE  +KK +   GP+SV +++ L      +     D+ C+  ++ HAVL VGYG Q    
Sbjct: 233 SEKALKKAVGLVGPVSVGIDAGLSSFQFYSKGVYYDKDCNAENINHAVLAVGYGTQKKTK 292

Query: 188 YWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           YW+V+NSWG    ++G+  + R  +NACGI  +A Y  +
Sbjct: 293 YWIVKNSWGEDWGNKGYILMAREKDNACGISSLASYPVM 331



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 10/144 (6%)

Query: 882  IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 941
            I   N  P    D+ C     G A    G+ +        ++ + G +GP      +  G
Sbjct: 197  IDSENAYPYVGEDQECMYNATGKAASCKGFKEVQEGSEKALKKAVGLVGP------VSVG 250

Query: 942  NNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDE 1001
             +A G+     Y+    V  D+ C+  ++ HAVL VGYG Q    YW+V+NSWG    ++
Sbjct: 251  IDA-GLSSFQFYSK--GVYYDKDCNAENINHAVLAVGYGTQKKTKYWIVKNSWGEDWGNK 307

Query: 1002 GFFKIER-GNNACGIEQIAGYATI 1024
            G+  + R  +NACGI  +A Y  +
Sbjct: 308  GYILMAREKDNACGISSLASYPVM 331


>gi|2780176|emb|CAA71085.1| cystein proteinase [Leishmania mexicana]
          Length = 443

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 138/301 (45%), Gaps = 22/301 (7%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 94

Query: 710 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 769
              ++         A R   +           VPDA DWR+K    P  +Q ACGSCWAF
Sbjct: 95  -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAF 153

Query: 770 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKD 826
           S  G +EGQ+ +   +LV  S+ QLV C    +GC G     + ++  Q     L +E  
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMDNGCSGGLMLQAFDWLLQNTNGHLYTEDS 213

Query: 827 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHD 884
           YPY + NG   +C+ + S++ +    D     GS  + M   L K GP+++ L++     
Sbjct: 214 YPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMS 272

Query: 885 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 944
           Y    +      C    L H VLLVGY     +PYW+++NSWG    ++G+ ++  G NA
Sbjct: 273 YKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNA 328

Query: 945 C 945
           C
Sbjct: 329 C 329



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 140/302 (46%), Gaps = 23/302 (7%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 94

Query: 344 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 403
              ++         A R   +           VPDA DWR+K    P  +Q ACGSCWAF
Sbjct: 95  -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAF 153

Query: 404 SIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ---AGLESEK 460
           S  G +EGQ+ +   +LV  S+ QLV C    +GC G   L Q  ++  Q     L +E 
Sbjct: 154 SAVGNIEGQWYLAGHELVSLSEQQLVSCDDMDNGCSGGLML-QAFDWLLQNTNGHLYTED 212

Query: 461 DYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGS--ETMKKILYKYGPLSVGLNSHLIH 518
            YPY +GNG   +C+ + S++ +    D     GS  + M   L K GP+++ L++    
Sbjct: 213 SYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFM 271

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN 578
            Y    +      C    L H VLLVGY    ++PYW+ +NSWG    ++G+ ++  G N
Sbjct: 272 SYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVN 327

Query: 579 AC 580
           AC
Sbjct: 328 AC 329



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P  +Q  CGSCWAFS  G +EGQ+ +   +LV  S+ QLV C    
Sbjct: 126 VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMD 185

Query: 71  SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC G     + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     
Sbjct: 186 NGCSGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLI 244

Query: 128 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           GS  + M   L K GP+++ L++     Y    +      C    L H VLLVGY     
Sbjct: 245 GSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGE 300

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 301 VPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|426369199|ref|XP_004051582.1| PREDICTED: cathepsin W [Gorilla gorilla gorilla]
          Length = 376

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 154/346 (44%), Gaps = 43/346 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 706
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 765
               G       Y R       + + +   E +  VP   DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFTCDWRKVAGAISPIKDQKNCNC 152

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  + I     V+ S  +L++C +   GC G F ++  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASE 212

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIH 883
           KDYP++     +    + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQGK--VRAHSCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLR 270

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN--------------------IPYWLVR 923
            Y    I+    TC P  + H+VLLVG+G   +                     PYW+++
Sbjct: 271 LYRKGVIKATPITCDPQLVDHSVLLVGFGSIKSEEGILAETVSSQSQPQPPHPTPYWILK 330

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV--VKNDETCSP 967
           NSWG    ++G+F++ RG+N CGI +    A +    +K   +C P
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARVQKPDMKPRVSCPP 376



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 146/333 (43%), Gaps = 40/333 (12%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 340
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 399
               G       Y R       + + +   E +  VP   DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFTCDWRKVAGAISPIKDQKNCNC 152

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  + I     V+ S  +L++C +   GC G    +  I   + +GL SE
Sbjct: 153 CWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASE 212

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSETMKKILYKYGPLSVGLNSHLIH 518
           KDYP++ G      C + K   K+   +DF+   N    + + L  YGP++V +N   + 
Sbjct: 213 KDYPFQ-GKVRAHSC-HPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLR 270

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------------------QDDIPYWLAR 558
            Y    I+    TC P  + H+VLLVG+G                         PYW+ +
Sbjct: 271 LYRKGVIKATPITCDPQLVDHSVLLVGFGSIKSEEGILAETVSSQSQPQPPHPTPYWILK 330

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 331 NSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 6   EKDGPVPDAWDWRK-KNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           E +  VP   DWRK      P  DQ +C  CWA + AG +E  + I     V+ S  +L+
Sbjct: 123 EPEESVPFTCDWRKVAGAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELL 182

Query: 65  ECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           +C +   GC G F ++  I   + +GL SEKDYP++     +    + K   K+   +DF
Sbjct: 183 DCGRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQGK--VRAHSCHPKKYQKVAWIQDF 240

Query: 124 LHF-NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
           +   N    + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G 
Sbjct: 241 IMLQNNEHRIAQYLATYGPITVTINMKPLRLYRKGVIKATPITCDPQLVDHSVLLVGFGS 300

Query: 183 QDN--------------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
             +                     PYW+++NSWG    ++G+F++ RG+N CGI +    
Sbjct: 301 IKSEEGILAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360

Query: 223 ATI 225
           A +
Sbjct: 361 ARV 363



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 20/81 (24%)

Query: 964  TCSPYDLGHAVLLVGYGK--------------------QDDIPYWLVRNSWGPIGPDEGF 1003
            TC P  + H+VLLVG+G                         PYW+++NSWG    ++G+
Sbjct: 283  TCDPQLVDHSVLLVGFGSIKSEEGILAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGY 342

Query: 1004 FKIERGNNACGIEQIAGYATI 1024
            F++ RG+N CGI +    A +
Sbjct: 343  FRLHRGSNTCGITKFPLTARV 363


>gi|313235882|emb|CBY11269.1| unnamed protein product [Oikopleura dioica]
          Length = 371

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 163/329 (49%), Gaps = 42/329 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYF----KQDGHKKH-----ERYGTSEFSDRSPEEILC 708
           F+ F+++  + Y+ ++E   RF+ F    K+     H      +YG +EF+D S  E   
Sbjct: 50  FENFLLEHPKMYS-EQESHSRFQTFWENLKRIKFHNHIEQGSAKYGVTEFADLSDFEF-- 106

Query: 709 KTGFKWSERTY-----ERIVADREKVEKMLMEVEKD----GPVPDAWDWRKKNVTGPAGD 759
                   R Y     E  + +R+K E+      K       V + +DW +K       +
Sbjct: 107 -------RRHYLGLKPELKIPNRKKYERKSRNSSKKLKFAKTVDETFDWVEKGAVTEVKN 159

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ- 818
           Q  CGSCWAFS  G +EG +   TG LV  S+ +LV+C ++ SGC+G   + + E   + 
Sbjct: 160 QGMCGSCWAFSTTGNIEGAWFKATGDLVSLSEQELVDCDQKDSGCNGGLMDQAFEEVIRI 219

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSETMKKILYKYGPLSVLL 877
            GLE+E+ YPY   +G +  C ++KS  K+    DF+      E + + L ++GPLS+ +
Sbjct: 220 GGLETEQQYPY---DGVQETCNFEKSLSKVQI-DDFMDIGEDEEEIAEALEEHGPLSIAI 275

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI--------PYWLVRNSWGPI 929
           N+  +  Y G         CS   L H VL+VGYG + +         PYW ++NSWGP 
Sbjct: 276 NAFGMQFYRGGISHPLSFLCSQDGLDHGVLMVGYGVEHHTTWRHRHPRPYWKIKNSWGPR 335

Query: 930 GPDEGFFKIERGNNACGIEQIAGYATIDV 958
             ++G++++ RG   CG+ ++   + ++ 
Sbjct: 336 WGEDGYYRVARGKGVCGVNKMVSTSIVNA 364



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 159/329 (48%), Gaps = 41/329 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYF----KQDGHKKH-----ERYGTSEFSDRSPEEILC 342
           F+ F+++  + Y+ ++E   RF+ F    K+     H      +YG +EF+D S  E   
Sbjct: 50  FENFLLEHPKMYS-EQESHSRFQTFWENLKRIKFHNHIEQGSAKYGVTEFADLSDFEF-- 106

Query: 343 KTGFKWSERTY-----ERIVADREKVEKMLMEVEKD----GPVPDAWDWRKKNVTGPAGD 393
                   R Y     E  + +R+K E+      K       V + +DW +K       +
Sbjct: 107 -------RRHYLGLKPELKIPNRKKYERKSRNSSKKLKFAKTVDETFDWVEKGAVTEVKN 159

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQ 453
           Q  CGSCWAFS  G +EG +   TG LV  S+ +LV+C ++ SGC G    +   E    
Sbjct: 160 QGMCGSCWAFSTTGNIEGAWFKATGDLVSLSEQELVDCDQKDSGCNGGLMDQAFEEVIRI 219

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN-GSETMKKILYKYGPLSVGL 512
            GLE+E+ YPY   +G +  C ++KS  K+    DF+      E + + L ++GPLS+ +
Sbjct: 220 GGLETEQQYPY---DGVQETCNFEKSLSKVQI-DDFMDIGEDEEEIAEALEEHGPLSIAI 275

Query: 513 NSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI--------PYWLARNSWGPI 564
           N+  + FY G         CS   L H VL+VGYG +           PYW  +NSWGP 
Sbjct: 276 NAFGMQFYRGGISHPLSFLCSQDGLDHGVLMVGYGVEHHTTWRHRHPRPYWKIKNSWGPR 335

Query: 565 GPDEGFFKIERGNNACGIEQIAGYATIDV 593
             ++G++++ RG   CG+ ++   + ++ 
Sbjct: 336 WGEDGYYRVARGKGVCGVNKMVSTSIVNA 364



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           V + +DW +K       +Q  CGSCWAFS  G +EG +   TG LV  S+ +LV+C ++ 
Sbjct: 142 VDETFDWVEKGAVTEVKNQGMCGSCWAFSTTGNIEGAWFKATGDLVSLSEQELVDCDQKD 201

Query: 71  SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-G 128
           SGC+G   + + E   +  GLE+E+ YPY   +G +  C ++KS  K+    DF+     
Sbjct: 202 SGCNGGLMDQAFEEVIRIGGLETEQQYPY---DGVQETCNFEKSLSKVQI-DDFMDIGED 257

Query: 129 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI-- 186
            E + + L ++GPLS+ +N+  +  Y G         CS   L H VL+VGYG + +   
Sbjct: 258 EEEIAEALEEHGPLSIAINAFGMQFYRGGISHPLSFLCSQDGLDHGVLMVGYGVEHHTTW 317

Query: 187 ------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 227
                 PYW ++NSWGP   ++G++++ RG   CG+ ++   + ++ 
Sbjct: 318 RHRHPRPYWKIKNSWGPRWGEDGYYRVARGKGVCGVNKMVSTSIVNA 364



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 8/70 (11%)

Query: 965  CSPYDLGHAVLLVGYGKQDDI--------PYWLVRNSWGPIGPDEGFFKIERGNNACGIE 1016
            CS   L H VL+VGYG +           PYW ++NSWGP   ++G++++ RG   CG+ 
Sbjct: 295  CSQDGLDHGVLMVGYGVEHHTTWRHRHPRPYWKIKNSWGPRWGEDGYYRVARGKGVCGVN 354

Query: 1017 QIAGYATIDV 1026
            ++   + ++ 
Sbjct: 355  KMVSTSIVNA 364


>gi|426216524|ref|XP_004002512.1| PREDICTED: cathepsin S isoform 1 [Ovis aries]
          Length = 331

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 132/269 (49%), Gaps = 18/269 (6%)

Query: 328 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 387
           G +   D + EE++           + R V  +    + L         PD+ DWR+K  
Sbjct: 76  GMNHLGDMTSEEVISSMSSLRVPSQWPRNVTYKSSPNQKL---------PDSLDWREKGC 126

Query: 388 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LE 445
                 Q ACGSCWAFS  G LE Q  +KTGKLV  S   LV+C+    G  GC+G  + 
Sbjct: 127 VTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTVKYGNKGCNGGFMT 186

Query: 446 QPIEY-THQAGLESEKDYPYRNGNGEKFKCAYD-KSKVKLFTGKDFLYFNGSETMKKILY 503
           +  +Y     G++SE  YPY+  +G   +C YD K++    +    L F   E +K+ + 
Sbjct: 187 EAFQYIIDNNGIDSEASYPYKAMDG---RCQYDVKNRAATCSRYIELPFGSEEALKEAVA 243

Query: 504 KYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGP 563
             GP+SVG+++    F+        D +C+  ++ H VL+VGYG  +   YWL +NSWG 
Sbjct: 244 NKGPVSVGIDAKQTSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGSLNGKDYWLVKNSWGL 302

Query: 564 IGPDEGFFKIERGN-NACGIEQIAGYATI 591
              D+G+ ++ R + N CGI     Y  I
Sbjct: 303 NFGDQGYIRMARNSGNHCGIANFPSYPEI 331



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 130/269 (48%), Gaps = 19/269 (7%)

Query: 694 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 753
           G +   D + EE++           + R V  +    + L         PD+ DWR+K  
Sbjct: 76  GMNHLGDMTSEEVISSMSSLRVPSQWPRNVTYKSSPNQKL---------PDSLDWREKGC 126

Query: 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK---QCSGCDGCFFE 810
                 Q ACGSCWAFS  G LE Q  +KTGKLV  S   LV+C+       GC+G F  
Sbjct: 127 VTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTVKYGNKGCNGGFMT 186

Query: 811 PSIEY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSETMKKILY 868
            + +Y     G++SE  YPYK  +G   +C YD K++    +    L F   E +K+ + 
Sbjct: 187 EAFQYIIDNNGIDSEASYPYKAMDG---RCQYDVKNRAATCSRYIELPFGSEEALKEAVA 243

Query: 869 KYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 928
             GP+SV +++     +        D +C+  ++ H VL+VGYG  +   YWLV+NSWG 
Sbjct: 244 NKGPVSVGIDAKQTSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGSLNGKDYWLVKNSWGL 302

Query: 929 IGPDEGFFKIERGN-NACGIEQIAGYATI 956
              D+G+ ++ R + N CGI     Y  I
Sbjct: 303 NFGDQGYIRMARNSGNHCGIANFPSYPEI 331



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK-- 68
           +PD+ DWR+K        Q  CGSCWAFS  G LE Q  +KTGKLV  S   LV+C+   
Sbjct: 115 LPDSLDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTVK 174

Query: 69  -QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLH 125
               GC+G F   + +Y     G++SE  YPYK  +G   +C YD K++    +    L 
Sbjct: 175 YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDG---RCQYDVKNRAATCSRYIELP 231

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
           F   E +K+ +   GP+SV +++     +        D +C+  ++ H VL+VGYG  + 
Sbjct: 232 FGSEEALKEAVANKGPVSVGIDAKQTSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGSLNG 290

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
             YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 291 KDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIANFPSYPEI 331



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 928  PIGPDEGFFKI--ERGNNACGIE--QIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQD 983
            P G +E   +    +G  + GI+  Q + +     V  D +C+  ++ H VL+VGYG  +
Sbjct: 231  PFGSEEALKEAVANKGPVSVGIDAKQTSFFLYKTGVYYDPSCTQ-NVNHGVLVVGYGSLN 289

Query: 984  DIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
               YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 290  GKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIANFPSYPEI 331


>gi|432936690|ref|XP_004082231.1| PREDICTED: cathepsin L-like [Oryzias latipes]
          Length = 334

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 152/327 (46%), Gaps = 45/327 (13%)

Query: 292 FKAFIVKRGRQYAN-DEEIKERFEYFKQ-----------DGHKKHERYGTSEFSDRSPEE 339
           F A+ +K GR Y++  EE + R  +              D   K  R G + F+D   EE
Sbjct: 26  FHAWRLKFGRTYSSPTEEAQRRQTWLNNRKLVLVHNILADQGIKSYRLGMTYFADMENEE 85

Query: 340 ILCKTGFKWSERTYERIV---------ADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 390
                        Y+R++         A   +       + ++  +P A DWR K     
Sbjct: 86  -------------YKRLISQGCLGSFNASLPRRGSTFFRLPENKDLPAAVDWRDKGYVTD 132

Query: 391 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCGG--CDGLEQ 446
             DQ  CGSCWAFS  G LEGQ   KTGKLV  S+ QLV+C+      GCGG   D   +
Sbjct: 133 VKDQKQCGSCWAFSATGSLEGQTFRKTGKLVSLSEQQLVDCSGDYGNMGCGGGLMDDAFR 192

Query: 447 PIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSETMKKILYKY 505
            I+ T   G+++E+ YPY   +GE   C Y    V    TG   +     + +++ +   
Sbjct: 193 YIQAT--GGIDTEESYPYEAEDGE---CRYKPDAVGATCTGYVDVSSGDEDALQEAVATI 247

Query: 506 GPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIG 565
           GP+SVG+++  I F        ++  CS  +L H VL VGYG ++   YWL +NSWG   
Sbjct: 248 GPISVGIDASHISFQLYESGLYDEPQCSSSELDHGVLAVGYGSENGQDYWLVKNSWGLTW 307

Query: 566 PDEGFFKIERG-NNACGIEQIAGYATI 591
            D+G+ K+ +  +N CGI   A Y  +
Sbjct: 308 GDQGYIKMSKNKSNQCGIATAASYPLV 334



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 149/325 (45%), Gaps = 42/325 (12%)

Query: 658 FKAFIVKRGRQYAN-DEEIKERFEYFKQ-----------DGHKKHERYGTSEFSDRSPEE 705
           F A+ +K GR Y++  EE + R  +              D   K  R G + F+D   EE
Sbjct: 26  FHAWRLKFGRTYSSPTEEAQRRQTWLNNRKLVLVHNILADQGIKSYRLGMTYFADMENEE 85

Query: 706 ILCKTGFKWSERTYERIV---------ADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 756
                        Y+R++         A   +       + ++  +P A DWR K     
Sbjct: 86  -------------YKRLISQGCLGSFNASLPRRGSTFFRLPENKDLPAAVDWRDKGYVTD 132

Query: 757 AGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIE 814
             DQ  CGSCWAFS  G LEGQ   KTGKLV  S+ QLV+C+      GC G   + +  
Sbjct: 133 VKDQKQCGSCWAFSATGSLEGQTFRKTGKLVSLSEQQLVDCSGDYGNMGCGGGLMDDAFR 192

Query: 815 YTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGP 872
           Y     G+++E+ YPY+  +GE   C Y    V    TG   +     + +++ +   GP
Sbjct: 193 YIQATGGIDTEESYPYEAEDGE---CRYKPDAVGATCTGYVDVSSGDEDALQEAVATIGP 249

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 932
           +SV +++  I          ++  CS  +L H VL VGYG ++   YWLV+NSWG    D
Sbjct: 250 ISVGIDASHISFQLYESGLYDEPQCSSSELDHGVLAVGYGSENGQDYWLVKNSWGLTWGD 309

Query: 933 EGFFKIERG-NNACGIEQIAGYATI 956
           +G+ K+ +  +N CGI   A Y  +
Sbjct: 310 QGYIKMSKNKSNQCGIATAASYPLV 334



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 114/220 (51%), Gaps = 8/220 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P A DWR K       DQ  CGSCWAFS  G LEGQ   KTGKLV  S+ QLV+C+   
Sbjct: 118 LPAAVDWRDKGYVTDVKDQKQCGSCWAFSATGSLEGQTFRKTGKLVSLSEQQLVDCSGDY 177

Query: 71  S--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHF 126
              GC G   + +  Y     G+++E+ YPY+  +GE   C Y    V    TG   +  
Sbjct: 178 GNMGCGGGLMDDAFRYIQATGGIDTEESYPYEAEDGE---CRYKPDAVGATCTGYVDVSS 234

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
              + +++ +   GP+SV +++  I          ++  CS  +L H VL VGYG ++  
Sbjct: 235 GDEDALQEAVATIGPISVGIDASHISFQLYESGLYDEPQCSSSELDHGVLAVGYGSENGQ 294

Query: 187 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            YWLV+NSWG    D+G+ K+ +  +N CGI   A Y  +
Sbjct: 295 DYWLVKNSWGLTWGDQGYIKMSKNKSNQCGIATAASYPLV 334



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 961  NDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 1019
            ++  CS  +L H VL VGYG ++   YWLV+NSWG    D+G+ K+ +  +N CGI   A
Sbjct: 270  DEPQCSSSELDHGVLAVGYGSENGQDYWLVKNSWGLTWGDQGYIKMSKNKSNQCGIATAA 329

Query: 1020 GYATI 1024
             Y  +
Sbjct: 330  SYPLV 334


>gi|350415610|ref|XP_003490694.1| PREDICTED: cathepsin O-like [Bombus impatiens]
          Length = 355

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 36/321 (11%)

Query: 655 LETFKAFIVKRGRQYAND-EEIKERFEYF--------KQDGHKKHER---YGTSEFSDRS 702
           L+ F+ ++++  + Y ND  E +ERF+ F        K +G +  +    YG +EFSD S
Sbjct: 33  LKLFQNYVMRYNKSYRNDPTEYEERFKRFLKSLRHIEKMNGLRPSQESAYYGLTEFSDMS 92

Query: 703 PEEILCKT--------GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 754
            +E L  T        G K    +Y R    R  + +    V+K   +P  +DWR K V 
Sbjct: 93  EDEFLSLTLLPDLPARGEKHVNESYHR----RHHLLQSTNRVKKSVSIPLRFDWRDKGVI 148

Query: 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ----CSGCDGCFFE 810
            P  +Q +CG+CWAFS   ++E  YAIK G L   S  ++++CAK     C G D C   
Sbjct: 149 TPVRNQGSCGACWAFSTVEVVESMYAIKNGTLHMLSVQEMIDCAKNSNFGCEGGDICSL- 207

Query: 811 PSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDKS---KVKLFTGKDFLHFNGSETMKKI 866
            S     +  +  E  YP        K     DK+   K++ F   +F+  +  + +   
Sbjct: 208 LSWLLASKVQIFQESTYPLVGKTSMCKLGKMIDKASGVKIRDFNCDNFV--DAEDELLIT 265

Query: 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926
           +  +GP++  +N+    +Y G  I+ + ++ S  +L HAV +VGY K   IP+++++NSW
Sbjct: 266 VATHGPVAAAVNALSWQNYLGGVIQYHCDS-SFDNLNHAVQIVGYDKSAAIPHYIIKNSW 324

Query: 927 GPIGPDEGFFKIERGNNACGI 947
           G    D+G+  I  GNN CGI
Sbjct: 325 GTNFGDKGYMYIGIGNNLCGI 345



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 158/322 (49%), Gaps = 37/322 (11%)

Query: 289 LETFKAFIVKRGRQYAND-EEIKERFEYF--------KQDGHKKHER---YGTSEFSDRS 336
           L+ F+ ++++  + Y ND  E +ERF+ F        K +G +  +    YG +EFSD S
Sbjct: 33  LKLFQNYVMRYNKSYRNDPTEYEERFKRFLKSLRHIEKMNGLRPSQESAYYGLTEFSDMS 92

Query: 337 PEEILCKT--------GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 388
            +E L  T        G K    +Y R    R  + +    V+K   +P  +DWR K V 
Sbjct: 93  EDEFLSLTLLPDLPARGEKHVNESYHR----RHHLLQSTNRVKKSVSIPLRFDWRDKGVI 148

Query: 389 GPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-GCGG---CDGL 444
            P  +Q +CG+CWAFS   ++E  YAIK G L   S  ++++CAK  + GC G   C  L
Sbjct: 149 TPVRNQGSCGACWAFSTVEVVESMYAIKNGTLHMLSVQEMIDCAKNSNFGCEGGDICSLL 208

Query: 445 EQPIEYTHQAGLESEKDYPYRNGNGE-KFKCAYDKS---KVKLFTGKDFLYFNGSETMKK 500
              +    Q  +  E  YP        K     DK+   K++ F   +F+  +  + +  
Sbjct: 209 SWLLASKVQ--IFQESTYPLVGKTSMCKLGKMIDKASGVKIRDFNCDNFV--DAEDELLI 264

Query: 501 ILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNS 560
            +  +GP++  +N+     Y G  I+ + ++ S  +L HAV +VGY K   IP+++ +NS
Sbjct: 265 TVATHGPVAAAVNALSWQNYLGGVIQYHCDS-SFDNLNHAVQIVGYDKSAAIPHYIIKNS 323

Query: 561 WGPIGPDEGFFKIERGNNACGI 582
           WG    D+G+  I  GNN CGI
Sbjct: 324 WGTNFGDKGYMYIGIGNNLCGI 345



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL 63
            V+K   +P  +DWR K V  P  +Q  CG+CWAFS   ++E  YAIK G L   S  ++
Sbjct: 129 RVKKSVSIPLRFDWRDKGVITPVRNQGSCGACWAFSTVEVVESMYAIKNGTLHMLSVQEM 188

Query: 64  VECAKQ----CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDKS---KV 115
           ++CAK     C G D C    S     +  +  E  YP        K     DK+   K+
Sbjct: 189 IDCAKNSNFGCEGGDICSL-LSWLLASKVQIFQESTYPLVGKTSMCKLGKMIDKASGVKI 247

Query: 116 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 175
           + F   +F+  +  + +   +  +GP++  +N+    +Y G  I+ + ++ S  +L HAV
Sbjct: 248 RDFNCDNFV--DAEDELLITVATHGPVAAAVNALSWQNYLGGVIQYHCDS-SFDNLNHAV 304

Query: 176 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
            +VGY K   IP+++++NSWG    D+G+  I  GNN CGI
Sbjct: 305 QIVGYDKSAAIPHYIIKNSWGTNFGDKGYMYIGIGNNLCGI 345



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 32/47 (68%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            +L HAV +VGY K   IP+++++NSWG    D+G+  I  GNN CGI
Sbjct: 299  NLNHAVQIVGYDKSAAIPHYIIKNSWGTNFGDKGYMYIGIGNNLCGI 345


>gi|391341656|ref|XP_003745143.1| PREDICTED: uncharacterized protein LOC100900885 [Metaseiulus
           occidentalis]
          Length = 1356

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 188/422 (44%), Gaps = 37/422 (8%)

Query: 277 IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGT- 329
           I+  +  +  ++ E F  F    G+ Y    E ++R   F+ +       ++++  Y   
Sbjct: 259 IQEFVRHNASHVDEYFAKFKKHHGKDYRFAAEERQRRHNFRHNVRYVNSMNRRNLSYALK 318

Query: 330 -SEFSDRSPEEILCKTG--FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 386
            +E +D + EE+    G   + S R + R  +  E           D  +PD  DWR + 
Sbjct: 319 LNERADSAREELGTHGGCLRRASRRFFGRDFSPEE--------CRNDQILPDHVDWRLEG 370

Query: 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK--LVEFSKSQLVECAKQCSGCGGCDG- 443
              P  +Q  CGSCW+F++   LE QY +  GK  L  FS+ QLV+C+   S  G C G 
Sbjct: 371 AVTPVKNQGTCGSCWSFAVIAHLESQYFLNNGKENLTRFSEQQLVDCSWDFSNTG-CSGG 429

Query: 444 -LEQPIEYTHQAGLESEKDY-PYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKI 501
            +E    Y  + GL +++ Y PYR   G K +     ++  + T + F    G E ++  
Sbjct: 430 SIESAFSYVKEYGLFTDEQYGPYREEEG-KCRDTVTGTEPTISTLEGFNAIGGKECLRNY 488

Query: 502 LYKYGPLSVGLNSHLIHF-YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNS 560
           +   GP++V +++    F Y    + KN   C   DL HAVL +GYG+ +  PYWL +NS
Sbjct: 489 IALKGPIAVAIDASSPSFVYYSHGVYKN-PACG-RDLNHAVLAIGYGELNGEPYWLIKNS 546

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQRLVLEKKAIMLIQAVFLLCGVASC 620
           WG I   EGF  I + NN CGIE    YA +   +   +  K     +    +L  V   
Sbjct: 547 WGDIWGSEGFMLISQENNTCGIEDELSYADLGSELTLRIHSKLNRGPVMTTLVLVFV--- 603

Query: 621 LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFE 680
           L +  L+D      VA  D  +   +  F     +      I K    Y ++E  + R +
Sbjct: 604 LAIIKLSD------VANADEESFTWTREFSATGYIIKPSNGIRKPFTIYHDEEGSRSRVD 657

Query: 681 YF 682
           Y+
Sbjct: 658 YY 659



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 18/317 (5%)

Query: 650  DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCK 709
            D+ ++ E F  F  + G+ Y +  E +ER   F  +      R+  S         +   
Sbjct: 1048 DDSHVDEHFSNFKNEHGKSYEHPTEERERRHNFHHN-----MRFVNSMNRRNLSFALKLN 1102

Query: 710  TGFKWSERTYERIVAD------REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 763
                W++  ++ +         +   E    E  +   VPD  DWR +    P  DQA C
Sbjct: 1103 NRADWNQGEFKLLRGRLQSTNVKSSAEDFPKEKFEHRTVPDYVDWRLEGAVTPVKDQAIC 1162

Query: 764  GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGL 821
            GSCW+F   G +EGQY +K G+LV F++ QLV+C+       CDG     + +Y  + GL
Sbjct: 1163 GSCWSFGTVGHIEGQYFLKHGELVRFAEQQLVDCSWTSGNDACDGGLDYVAYDYIKKYGL 1222

Query: 822  ESEKDY-PYKNANGEKFKCAYDKSKVK-LFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879
             S+  Y PY+  +G   KC   + + K + T + + + +G E ++K +   GP+SV +++
Sbjct: 1223 SSDAQYGPYRGIDG---KCKDVEIENKPITTIQRYYNISGVENLRKAIAFVGPISVAIDA 1279

Query: 880  DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 939
                          D  CS  +L HAVL VGYG     PYWL++NSW     ++G+  I 
Sbjct: 1280 SRPSLSFYAHGVYEDPDCSSTELDHAVLAVGYGVLHGKPYWLIKNSWSTYWGNDGYILIS 1339

Query: 940  RGNNACGIEQIAGYATI 956
            + +N CG+     Y  +
Sbjct: 1340 QKDNMCGVASTPTYVEL 1356



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 150/321 (46%), Gaps = 25/321 (7%)

Query: 284  DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCK 343
            D+ ++ E F  F  + G+ Y +  E +ER   F  +      R+  S         +   
Sbjct: 1048 DDSHVDEHFSNFKNEHGKSYEHPTEERERRHNFHHN-----MRFVNSMNRRNLSFALKLN 1102

Query: 344  TGFKWSERTYERIVAD------REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 397
                W++  ++ +         +   E    E  +   VPD  DWR +    P  DQA C
Sbjct: 1103 NRADWNQGEFKLLRGRLQSTNVKSSAEDFPKEKFEHRTVPDYVDWRLEGAVTPVKDQAIC 1162

Query: 398  GSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPI--EYTHQAG 455
            GSCW+F   G +EGQY +K G+LV F++ QLV+C+   SG   CDG    +  +Y  + G
Sbjct: 1163 GSCWSFGTVGHIEGQYFLKHGELVRFAEQQLVDCS-WTSGNDACDGGLDYVAYDYIKKYG 1221

Query: 456  LESEKDY-PYRNGNGEKFKCAYDKSKVKLFTGKDFLY-FNGSETMKKILYKYGPLSVGLN 513
            L S+  Y PYR  +G   KC   + + K  T     Y  +G E ++K +   GP+SV ++
Sbjct: 1222 LSSDAQYGPYRGIDG---KCKDVEIENKPITTIQRYYNISGVENLRKAIAFVGPISVAID 1278

Query: 514  S---HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGF 570
            +    L  + +G      D  CS  +L HAVL VGYG     PYWL +NSW     ++G+
Sbjct: 1279 ASRPSLSFYAHGV---YEDPDCSSTELDHAVLAVGYGVLHGKPYWLIKNSWSTYWGNDGY 1335

Query: 571  FKIERGNNACGIEQIAGYATI 591
              I + +N CG+     Y  +
Sbjct: 1336 ILISQKDNMCGVASTPTYVEL 1356



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 149/319 (46%), Gaps = 18/319 (5%)

Query: 4   EVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGK--LVEFSKS 61
           E   D  +PD  DWR +    P  +Q  CGSCW+F++   LE QY +  GK  L  FS+ 
Sbjct: 353 ECRNDQILPDHVDWRLEGAVTPVKNQGTCGSCWSFAVIAHLESQYFLNNGKENLTRFSEQ 412

Query: 62  QLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDY-PYKNANGEKFKCAYDKSKVKLF 118
           QLV+C+   S  GC G   E +  Y  + GL +++ Y PY+   G K +     ++  + 
Sbjct: 413 QLVDCSWDFSNTGCSGGSIESAFSYVKEYGLFTDEQYGPYREEEG-KCRDTVTGTEPTIS 471

Query: 119 TGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
           T + F    G E ++  +   GP++V ++ S     Y    + KN   C   DL HAVL 
Sbjct: 472 TLEGFNAIGGKECLRNYIALKGPIAVAIDASSPSFVYYSHGVYKN-PACG-RDLNHAVLA 529

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVIQRLVLEKK 237
           +GYG+ +  PYWL++NSWG I   EGF  I + NN CGIE    YA +   +   +  K 
Sbjct: 530 IGYGELNGEPYWLIKNSWGDIWGSEGFMLISQENNTCGIEDELSYADLGSELTLRIHSKL 589

Query: 238 AIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 297
               +    +L  V   L +  L+D      VA  D  +   +  F     +      I 
Sbjct: 590 NRGPVMTTLVLVFV---LAIIKLSD------VANADEESFTWTREFSATGYIIKPSNGIR 640

Query: 298 KRGRQYANDEEIKERFEYF 316
           K    Y ++E  + R +Y+
Sbjct: 641 KPFTIYHDEEGSRSRVDYY 659



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 158/330 (47%), Gaps = 27/330 (8%)

Query: 643 IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGT- 695
           I+  +  +  ++ E F  F    G+ Y    E ++R   F+ +       ++++  Y   
Sbjct: 259 IQEFVRHNASHVDEYFAKFKKHHGKDYRFAAEERQRRHNFRHNVRYVNSMNRRNLSYALK 318

Query: 696 -SEFSDRSPEEILCKTG--FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 752
            +E +D + EE+    G   + S R + R  +  E           D  +PD  DWR + 
Sbjct: 319 LNERADSAREELGTHGGCLRRASRRFFGRDFSPEE--------CRNDQILPDHVDWRLEG 370

Query: 753 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK--LVEFSKSQLVECAKQCS--GCDGCF 808
              P  +Q  CGSCW+F++   LE QY +  GK  L  FS+ QLV+C+   S  GC G  
Sbjct: 371 AVTPVKNQGTCGSCWSFAVIAHLESQYFLNNGKENLTRFSEQQLVDCSWDFSNTGCSGGS 430

Query: 809 FEPSIEYTHQAGLESEKDY-PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 867
            E +  Y  + GL +++ Y PY+   G K +     ++  + T + F    G E ++  +
Sbjct: 431 IESAFSYVKEYGLFTDEQYGPYREEEG-KCRDTVTGTEPTISTLEGFNAIGGKECLRNYI 489

Query: 868 YKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926
              GP++V ++ S     Y    + KN   C   DL HAVL +GYG+ +  PYWL++NSW
Sbjct: 490 ALKGPIAVAIDASSPSFVYYSHGVYKN-PACG-RDLNHAVLAIGYGELNGEPYWLIKNSW 547

Query: 927 GPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           G I   EGF  I + NN CGIE    YA +
Sbjct: 548 GDIWGSEGFMLISQENNTCGIEDELSYADL 577



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 7/219 (3%)

Query: 11   VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            VPD  DWR +    P  DQA CGSCW+F   G +EGQY +K G+LV F++ QLV+C+   
Sbjct: 1141 VPDYVDWRLEGAVTPVKDQAICGSCWSFGTVGHIEGQYFLKHGELVRFAEQQLVDCSWTS 1200

Query: 71   --SGCDGCFFEPSIEYTHQAGLESEKDY-PYKNANGEKFKCAYDKSKVK-LFTGKDFLHF 126
                CDG     + +Y  + GL S+  Y PY+  +G   KC   + + K + T + + + 
Sbjct: 1201 GNDACDGGLDYVAYDYIKKYGLSSDAQYGPYRGIDG---KCKDVEIENKPITTIQRYYNI 1257

Query: 127  NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            +G E ++K +   GP+SV +++              D  CS  +L HAVL VGYG     
Sbjct: 1258 SGVENLRKAIAFVGPISVAIDASRPSLSFYAHGVYEDPDCSSTELDHAVLAVGYGVLHGK 1317

Query: 187  PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            PYWL++NSW     ++G+  I + +N CG+     Y  +
Sbjct: 1318 PYWLIKNSWSTYWGNDGYILISQKDNMCGVASTPTYVEL 1356



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 37/56 (66%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            DL HAVL +GYG+ +  PYWL++NSWG I   EGF  I + NN CGIE    YA +
Sbjct: 522  DLNHAVLAIGYGELNGEPYWLIKNSWGDIWGSEGFMLISQENNTCGIEDELSYADL 577



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 36/66 (54%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            V  D  CS  +L HAVL VGYG     PYWL++NSW     ++G+  I + +N CG+   
Sbjct: 1291 VYEDPDCSSTELDHAVLAVGYGVLHGKPYWLIKNSWSTYWGNDGYILISQKDNMCGVAST 1350

Query: 1019 AGYATI 1024
              Y  +
Sbjct: 1351 PTYVEL 1356


>gi|194882211|ref|XP_001975206.1| GG20691 [Drosophila erecta]
 gi|190658393|gb|EDV55606.1| GG20691 [Drosophila erecta]
          Length = 378

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 32/323 (9%)

Query: 655 LETFKAFIVKRGRQY--ANDEEIKER-FEYFKQ--DGHKKHERYGTS-------EFSDRS 702
           ++ F  F+ + G+ Y  A D  + ER F   K   D        G S        F+D +
Sbjct: 67  VQNFGDFLSQSGKTYLSAADRALHERAFASTKNVVDAGNAAFAKGVSTFKQSVNAFADLT 126

Query: 703 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
             E L + TG K S     R  A  ++V      +    P+PDA+DWR+     P   Q 
Sbjct: 127 HPEFLSQLTGLKRSPEAKARAAASLKEV------ILPKKPIPDAFDWREHGGVTPVKFQG 180

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK----QCSGCDGCFFEPSIEYTH 817
            CGSCWAF+  G +EG    KTG L   S+  LV+C        +GCDG F E +  +  
Sbjct: 181 TCGSCWAFATTGAIEGHTFRKTGSLPNLSEQNLVDCGPLEDFSLNGCDGGFQEAAFCFID 240

Query: 818 --QAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLS 874
             Q G+     YPYK+    K  C YD  K      G   +     E +KK++   GP++
Sbjct: 241 EVQKGVSQAGAYPYKD---NKETCKYDGKKSGASLKGFAAIPPKDEEQLKKVVATLGPVA 297

Query: 875 VLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDE 933
             +N  + + +Y G     ND+ C+  +  H++L+VGYG ++   YW+++NSW     ++
Sbjct: 298 CSVNGLETLKNYAGGIY--NDDECNKGEPNHSILVVGYGSENGQDYWIIKNSWDDTWGEQ 355

Query: 934 GFFKIERGNNACGIEQIAGYATI 956
           G+F++ RG N C I +   Y  +
Sbjct: 356 GYFRLPRGQNYCFIAEECSYPVV 378



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 115/224 (51%), Gaps = 13/224 (5%)

Query: 10  PVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK- 68
           P+PDA+DWR+     P   Q  CGSCWAF+  G +EG    KTG L   S+  LV+C   
Sbjct: 160 PIPDAFDWREHGGVTPVKFQGTCGSCWAFATTGAIEGHTFRKTGSLPNLSEQNLVDCGPL 219

Query: 69  ---QCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKD 122
                +GCDG F E +  +    Q G+     YPYK+    K  C YD  K      G  
Sbjct: 220 EDFSLNGCDGGFQEAAFCFIDEVQKGVSQAGAYPYKD---NKETCKYDGKKSGASLKGFA 276

Query: 123 FLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
            +     E +KK++   GP++  +N  + + +Y G     ND+ C+  +  H++L+VGYG
Sbjct: 277 AIPPKDEEQLKKVVATLGPVACSVNGLETLKNYAGGIY--NDDECNKGEPNHSILVVGYG 334

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
            ++   YW+++NSW     ++G+F++ RG N C I +   Y  +
Sbjct: 335 SENGQDYWIIKNSWDDTWGEQGYFRLPRGQNYCFIAEECSYPVV 378



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 145/322 (45%), Gaps = 29/322 (9%)

Query: 289 LETFKAFIVKRGRQY--ANDEEIKER-FEYFKQ--DGHKKHERYGTS-------EFSDRS 336
           ++ F  F+ + G+ Y  A D  + ER F   K   D        G S        F+D +
Sbjct: 67  VQNFGDFLSQSGKTYLSAADRALHERAFASTKNVVDAGNAAFAKGVSTFKQSVNAFADLT 126

Query: 337 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
             E L + TG K S     R  A  ++V      +    P+PDA+DWR+     P   Q 
Sbjct: 127 HPEFLSQLTGLKRSPEAKARAAASLKEV------ILPKKPIPDAFDWREHGGVTPVKFQG 180

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAK-QCSGCGGCDGLEQPIEYTH-- 452
            CGSCWAF+  G +EG    KTG L   S+  LV+C   +     GCDG  Q   +    
Sbjct: 181 TCGSCWAFATTGAIEGHTFRKTGSLPNLSEQNLVDCGPLEDFSLNGCDGGFQEAAFCFID 240

Query: 453 --QAGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLS 509
             Q G+     YPY++    K  C YD  K      G   +     E +KK++   GP++
Sbjct: 241 EVQKGVSQAGAYPYKD---NKETCKYDGKKSGASLKGFAAIPPKDEEQLKKVVATLGPVA 297

Query: 510 VGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEG 569
             +N  L    N      ND+ C+  +  H++L+VGYG ++   YW+ +NSW     ++G
Sbjct: 298 CSVNG-LETLKNYAGGIYNDDECNKGEPNHSILVVGYGSENGQDYWIIKNSWDDTWGEQG 356

Query: 570 FFKIERGNNACGIEQIAGYATI 591
           +F++ RG N C I +   Y  +
Sbjct: 357 YFRLPRGQNYCFIAEECSYPVV 378



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)

Query: 946  GIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFK 1005
            G+E +  YA    + ND+ C+  +  H++L+VGYG ++   YW+++NSW     ++G+F+
Sbjct: 302  GLETLKNYA--GGIYNDDECNKGEPNHSILVVGYGSENGQDYWIIKNSWDDTWGEQGYFR 359

Query: 1006 IERGNNACGIEQIAGYATI 1024
            + RG N C I +   Y  +
Sbjct: 360  LPRGQNYCFIAEECSYPVV 378


>gi|218137972|gb|ACK57563.1| cysteine protease-like protein [Arachis hypogaea]
          Length = 364

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 157/345 (45%), Gaps = 50/345 (14%)

Query: 639 DTLAIEGSLTFDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER- 692
           D + I   +   +E++L     F AF  K  + YA  EE   RF  FK +    K H+  
Sbjct: 27  DNILIRQVVEDGDEHLLNAEHHFSAFKTKFSKTYATKEEHDYRFGVFKSNLLRAKSHQEL 86

Query: 693 -----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 747
                +G ++FSD +P E      F+      + +    +     ++  +    +P  +D
Sbjct: 87  DPSAIHGVTKFSDLTPSE------FRSQFLGLKPLSLPSDAHNAPILPTDN---LPKDFD 137

Query: 748 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC------ 801
           WR         +Q   GSCW+FS  G LEG + + TG+LV  S+ QLV+C  +C      
Sbjct: 138 WRDHGAVTNVKNQGTGGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHECDPDLND 197

Query: 802 ---SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 857
              SGC+G     +  YT +A GL  E+DY Y     ++  C +DKSK+        +  
Sbjct: 198 ACDSGCNGGLMTTAFGYTKKAGGLVREEDYLYTGR--DRGPCKFDKSKIAASVSNFSVVS 255

Query: 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG- 912
              + +   L K GPLSV +N+  +  Y G           P+     L H VLLVGYG 
Sbjct: 256 LDEDQIAANLVKNGPLSVGINAVYMQTYIGG-------VSCPFICGKHLDHGVLLVGYGA 308

Query: 913 ------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 951
                 +    PYW+++NSWG    + G++KI RG N CG++ + 
Sbjct: 309 GGYAPIRFKEKPYWIIKNSWGENWGENGYYKICRGPNMCGVDSMV 353



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 158/345 (45%), Gaps = 49/345 (14%)

Query: 273 DTLAIEGSLTFDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER- 326
           D + I   +   +E++L     F AF  K  + YA  EE   RF  FK +    K H+  
Sbjct: 27  DNILIRQVVEDGDEHLLNAEHHFSAFKTKFSKTYATKEEHDYRFGVFKSNLLRAKSHQEL 86

Query: 327 -----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 381
                +G ++FSD +P E      F+      + +    +     ++  +    +P  +D
Sbjct: 87  DPSAIHGVTKFSDLTPSE------FRSQFLGLKPLSLPSDAHNAPILPTDN---LPKDFD 137

Query: 382 WRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----S 436
           WR         +Q   GSCW+FS  G LEG + + TG+LV  S+ QLV+C  +C      
Sbjct: 138 WRDHGAVTNVKNQGTGGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHECDPDLND 197

Query: 437 GC-GGCDG--LEQPIEYTHQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF 492
            C  GC+G  +     YT +A GL  E+DY Y     ++  C +DKSK+        +  
Sbjct: 198 ACDSGCNGGLMTTAFGYTKKAGGLVREEDYLYT--GRDRGPCKFDKSKIAASVSNFSVVS 255

Query: 493 NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY----DLGHAVLLVGYG- 547
              + +   L K GPLSVG+N+  +  Y G           P+     L H VLLVGYG 
Sbjct: 256 LDEDQIAANLVKNGPLSVGINAVYMQTYIGG-------VSCPFICGKHLDHGVLLVGYGA 308

Query: 548 ------KQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIA 586
                 +  + PYW+ +NSWG    + G++KI RG N CG++ + 
Sbjct: 309 GGYAPIRFKEKPYWIIKNSWGENWGENGYYKICRGPNMCGVDSMV 353



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 113/231 (48%), Gaps = 30/231 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR         +Q   GSCW+FS  G LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 132 LPKDFDWRDHGAVTNVKNQGTGGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHEC 191

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     +  YT +A GL  E+DY Y     ++  C +DKSK+     
Sbjct: 192 DPDLNDACDSGCNGGLMTTAFGYTKKAGGLVREEDYLYTGR--DRGPCKFDKSKIAASVS 249

Query: 121 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 176
              +     + +   L K GPLSV +N+  +  Y G           P+     L H VL
Sbjct: 250 NFSVVSLDEDQIAANLVKNGPLSVGINAVYMQTYIGG-------VSCPFICGKHLDHGVL 302

Query: 177 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ + 
Sbjct: 303 LVGYGAGGYAPIRFKEKPYWIIKNSWGENWGENGYYKICRGPNMCGVDSMV 353


>gi|427797099|gb|JAA64001.1| Putative cathepsin l cathepsin l, partial [Rhipicephalus
           pulchellus]
          Length = 331

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 154/320 (48%), Gaps = 32/320 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGTS---------EFSDRSPEE 705
           + AF    G++Y +D E   R + + ++  K    +E+Y  S         EF D    E
Sbjct: 23  WSAFKALHGKEYESDTEEYYRLKIYMENRLKIARHNEKYAKSQVSYKLAMNEFGDMLHHE 82

Query: 706 IL-CKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPDAWDWRKKNVTGPAGDQAA 762
            +  + GFK       R   D  +     +E E  +D  +P   DWRKK    P  +Q  
Sbjct: 83  FVSTRNGFK-------RNYRDTPREGSFFVEPEGLEDFHLPKTVDWRKKGAVTPVKNQGQ 135

Query: 763 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTH-QA 819
           CGSCW+FS  G LEGQ+  K  KLV  S+  L++C++    +GC+G   + + +Y     
Sbjct: 136 CGSCWSFSTTGSLEGQHFRKLHKLVSLSEQNLIDCSRSFGNNGCEGGLMDYAFKYIKANK 195

Query: 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLL 877
           G+++E+ YPY   +G    C ++KS V   T   F+    G E  +KK +   GP+SV +
Sbjct: 196 GIDTEQSYPYNATDG---VCHFNKSAVGA-TDTGFVDIPEGDENKLKKAVATVGPVSVAI 251

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           ++        +    ++  C    L H VL+VGYG +D   YWLV+NSWG    D G+  
Sbjct: 252 DASHESFQFYSEGVYDEPECDSEQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDGGYIY 311

Query: 938 IERG-NNACGIEQIAGYATI 956
           + R  +N CGI   A Y  +
Sbjct: 312 MSRNKDNQCGIASAASYPLV 331



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 154/321 (47%), Gaps = 33/321 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGTS---------EFSDRSPEE 339
           + AF    G++Y +D E   R + + ++  K    +E+Y  S         EF D    E
Sbjct: 23  WSAFKALHGKEYESDTEEYYRLKIYMENRLKIARHNEKYAKSQVSYKLAMNEFGDMLHHE 82

Query: 340 IL-CKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPDAWDWRKKNVTGPAGDQAA 396
            +  + GFK       R   D  +     +E E  +D  +P   DWRKK    P  +Q  
Sbjct: 83  FVSTRNGFK-------RNYRDTPREGSFFVEPEGLEDFHLPKTVDWRKKGAVTPVKNQGQ 135

Query: 397 CGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH-Q 453
           CGSCW+FS  G LEGQ+  K  KLV  S+  L++C++   G  GC+G  ++   +Y    
Sbjct: 136 CGSCWSFSTTGSLEGQHFRKLHKLVSLSEQNLIDCSRSF-GNNGCEGGLMDYAFKYIKAN 194

Query: 454 AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSET-MKKILYKYGPLSVG 511
            G+++E+ YPY   +G    C ++KS V   T   F+    G E  +KK +   GP+SV 
Sbjct: 195 KGIDTEQSYPYNATDG---VCHFNKSAVGA-TDTGFVDIPEGDENKLKKAVATVGPVSVA 250

Query: 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           +++    F   +    ++  C    L H VL+VGYG +D   YWL +NSWG    D G+ 
Sbjct: 251 IDASHESFQFYSEGVYDEPECDSEQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDGGYI 310

Query: 572 KIERG-NNACGIEQIAGYATI 591
            + R  +N CGI   A Y  +
Sbjct: 311 YMSRNKDNQCGIASAASYPLV 331



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 118/225 (52%), Gaps = 10/225 (4%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +D  +P   DWRKK    P  +Q  CGSCW+FS  G LEGQ+  K  KLV  S+  L++C
Sbjct: 111 EDFHLPKTVDWRKKGAVTPVKNQGQCGSCWSFSTTGSLEGQHFRKLHKLVSLSEQNLIDC 170

Query: 67  AKQC--SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           ++    +GC+G   + + +Y     G+++E+ YPY   +G    C ++KS V   T   F
Sbjct: 171 SRSFGNNGCEGGLMDYAFKYIKANKGIDTEQSYPYNATDG---VCHFNKSAVGA-TDTGF 226

Query: 124 LHF-NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
           +    G E  +KK +   GP+SV +++        +    ++  C    L H VL+VGYG
Sbjct: 227 VDIPEGDENKLKKAVATVGPVSVAIDASHESFQFYSEGVYDEPECDSEQLDHGVLVVGYG 286

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
            +D   YWLV+NSWG    D G+  + R  +N CGI   A Y  +
Sbjct: 287 TKDGQDYWLVKNSWGTTWGDGGYIYMSRNKDNQCGIASAASYPLV 331



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 1017
            V ++  C    L H VL+VGYG +D   YWLV+NSWG    D G+  + R  +N CGI  
Sbjct: 265  VYDEPECDSEQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDGGYIYMSRNKDNQCGIAS 324

Query: 1018 IAGYATI 1024
             A Y  +
Sbjct: 325  AASYPLV 331


>gi|395735444|ref|XP_002815290.2| PREDICTED: cathepsin O [Pongo abelii]
          Length = 318

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 140/293 (47%), Gaps = 25/293 (8%)

Query: 664 KRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYER 721
            R R+ A   E   R  Y             YG ++FS   PEE          +  Y R
Sbjct: 33  SREREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEF---------KAIYLR 83

Query: 722 IVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQ 778
             +   K  +   EV    P   +P  +DWR K+V     +Q  CG CWAFS+ G +E  
Sbjct: 84  --SKPSKFPRYSAEVRMSIPNVSLPLRFDWRDKHVVTQVRNQQMCGGCWAFSVVGAVESA 141

Query: 779 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG-- 834
           YAIK   L + S  Q+++C+    GC+G     ++ + +  Q  L  + +YP+K  NG  
Sbjct: 142 YAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLC 201

Query: 835 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 894
             F  ++    +K ++  DF   N  + M K L  +GPL V++++    DY G  I+ + 
Sbjct: 202 HYFSGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH- 258

Query: 895 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
             CS  +  HAVL+ G+ K  + PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 259 --CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 115/210 (54%), Gaps = 9/210 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K+V     +Q  CG CWAFS+ G +E  YAIK   L + S  Q+++C+   
Sbjct: 105 LPLRFDWRDKHVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYNN 164

Query: 71  SGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHF 126
            GC+G     ++ + +  Q  L  + +YP+K  NG    F  ++    +K ++  DF   
Sbjct: 165 YGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFS-- 222

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           N  + M K L  +GPL V++++    DY G  I+ +   CS  +  HAVL+ G+ K  + 
Sbjct: 223 NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGFDKTGST 279

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 280 PYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 26/294 (8%)

Query: 298 KRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYER 355
            R R+ A   E   R  Y             YG ++FS   PEE          +  Y R
Sbjct: 33  SREREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEF---------KAIYLR 83

Query: 356 IVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQ 412
             +   K  +   EV    P   +P  +DWR K+V     +Q  CG CWAFS+ G +E  
Sbjct: 84  --SKPSKFPRYSAEVRMSIPNVSLPLRFDWRDKHVVTQVRNQQMCGGCWAFSVVGAVESA 141

Query: 413 YAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH--QAGLESEKDYPYRNGNG- 469
           YAIK   L + S  Q+++C+    GC G   L   + + +  Q  L  + +YP++  NG 
Sbjct: 142 YAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNA-LNWLNKMQVKLVKDSEYPFKAQNGL 200

Query: 470 -EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKN 528
              F  ++    +K ++  DF   N  + M K L  +GPL V +++     Y G  I+ +
Sbjct: 201 CHYFSGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH 258

Query: 529 DETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
              CS  +  HAVL+ G+ K    PYW+ RNSWG     +G+  ++ G+N CGI
Sbjct: 259 ---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS  +  HAVL+ G+ K    PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 259  CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309


>gi|351629613|gb|AEQ54770.1| cysteine proteinase CP1 [Coffea canephora]
          Length = 397

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 153/328 (46%), Gaps = 46/328 (14%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEI--- 706
           FK+F+ +  + Y+  EE   R   F ++  K  E         +G ++FSD + EE    
Sbjct: 74  FKSFVEEYEKTYSTHEEYVHRLGIFAKNLIKAAEHQAMDPSAIHGVTQFSDLTEEEFEAT 133

Query: 707 -LCKTGFKWSERTYERIVAD-REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 764
            +   G      T +    D  E   +++M+V     +P+++DWR+K        Q  CG
Sbjct: 134 YMGLKGGAGVGGTTQLGKDDGDESAAEVMMDVSD---LPESFDWREKGAVTEVKTQGRCG 190

Query: 765 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY 815
           SCWAFS  G +EG   I TGKL+  S+ QLV+C   C          GC G     +  Y
Sbjct: 191 SCWAFSTTGAIEGANFIATGKLLSLSEQQLVDCDHMCDLKEKDDCDDGCSGGLMTTAFNY 250

Query: 816 THQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPL 873
             +A G+E E  YPY    GE   C ++  KV +   ++F      E+ +   +   GPL
Sbjct: 251 LIEAGGIEEEVTYPYTGKRGE---CKFNPEKVAVKV-RNFAKIPEDESQIAANVVHNGPL 306

Query: 874 SVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNI-------PYWLVR 923
           ++ LN+  +  Y G    P+      C    + H VLLVGYG +          PYW+++
Sbjct: 307 AIGLNAVFMQTYIGGVSCPL-----ICDKKRINHGVLLVGYGSRGFSILRLGYKPYWIIK 361

Query: 924 NSWGPIGPDEGFFKIERGNNACGIEQIA 951
           NSWG    + G++++ RG+N CG+  + 
Sbjct: 362 NSWGKRWGEHGYYRLCRGHNMCGMSTMV 389



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 154/328 (46%), Gaps = 45/328 (13%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEI--- 340
           FK+F+ +  + Y+  EE   R   F ++  K  E         +G ++FSD + EE    
Sbjct: 74  FKSFVEEYEKTYSTHEEYVHRLGIFAKNLIKAAEHQAMDPSAIHGVTQFSDLTEEEFEAT 133

Query: 341 -LCKTGFKWSERTYERIVAD-REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 398
            +   G      T +    D  E   +++M+V     +P+++DWR+K        Q  CG
Sbjct: 134 YMGLKGGAGVGGTTQLGKDDGDESAAEVMMDVSD---LPESFDWREKGAVTEVKTQGRCG 190

Query: 399 SCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC-----SGC-GGCDG--LEQPIEY 450
           SCWAFS  G +EG   I TGKL+  S+ QLV+C   C       C  GC G  +     Y
Sbjct: 191 SCWAFSTTGAIEGANFIATGKLLSLSEQQLVDCDHMCDLKEKDDCDDGCSGGLMTTAFNY 250

Query: 451 THQA-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPL 508
             +A G+E E  YPY    GE   C ++  KV +   ++F      E+ +   +   GPL
Sbjct: 251 LIEAGGIEEEVTYPYTGKRGE---CKFNPEKVAVKV-RNFAKIPEDESQIAANVVHNGPL 306

Query: 509 SVGLNSHLIHFYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLAR 558
           ++GLN+  +  Y G    P+      C    + H VLLVGYG +          PYW+ +
Sbjct: 307 AIGLNAVFMQTYIGGVSCPL-----ICDKKRINHGVLLVGYGSRGFSILRLGYKPYWIIK 361

Query: 559 NSWGPIGPDEGFFKIERGNNACGIEQIA 586
           NSWG    + G++++ RG+N CG+  + 
Sbjct: 362 NSWGKRWGEHGYYRLCRGHNMCGMSTMV 389



 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 114/231 (49%), Gaps = 30/231 (12%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+++DWR+K        Q  CGSCWAFS  G +EG   I TGKL+  S+ QLV+C   C
Sbjct: 168 LPESFDWREKGAVTEVKTQGRCGSCWAFSTTGAIEGANFIATGKLLSLSEQQLVDCDHMC 227

Query: 71  ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                     GC G     +  Y  +A G+E E  YPY    GE   C ++  KV +   
Sbjct: 228 DLKEKDDCDDGCSGGLMTTAFNYLIEAGGIEEEVTYPYTGKRGE---CKFNPEKVAVKV- 283

Query: 121 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 176
           ++F      E+ +   +   GPL++ LN+  +  Y G    P+      C    + H VL
Sbjct: 284 RNFAKIPEDESQIAANVVHNGPLAIGLNAVFMQTYIGGVSCPL-----ICDKKRINHGVL 338

Query: 177 LVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           LVGYG +          PYW+++NSWG    + G++++ RG+N CG+  + 
Sbjct: 339 LVGYGSRGFSILRLGYKPYWIIKNSWGKRWGEHGYYRLCRGHNMCGMSTMV 389



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 938  IERGNNACGIEQIAGYATIDVVKNDETCSPYDLGHAVLLVGYGKQDDI-------PYWLV 990
            +  G  A G+  +     I  V     C    + H VLLVGYG +          PYW++
Sbjct: 301  VHNGPLAIGLNAVFMQTYIGGVSCPLICDKKRINHGVLLVGYGSRGFSILRLGYKPYWII 360

Query: 991  RNSWGPIGPDEGFFKIERGNNACGIEQIA 1019
            +NSWG    + G++++ RG+N CG+  + 
Sbjct: 361  KNSWGKRWGEHGYYRLCRGHNMCGMSTMV 389


>gi|50539796|ref|NP_001002368.1| cathepsin L.1 precursor [Danio rerio]
 gi|49900360|gb|AAH75887.1| Cathepsin L.1 [Danio rerio]
          Length = 334

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 143/320 (44%), Gaps = 32/320 (10%)

Query: 658 FKAFIVKRGRQYANDEEIKER------------FEYFKQDGHKKHERYGTSEFSDRSPEE 705
           F A+ +K G+ Y + EE   R                  D   K  R G + F+D S EE
Sbjct: 26  FHAWKLKFGKSYRSAEEESHRQLTWLTNRKLVLVHNMMADQGLKSYRLGMTYFADMSNEE 85

Query: 706 ILCKTGFKWSERTYERIVADREKVE----KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 761
                   + +  +   +      +         + K   VPD  DWR K       DQ 
Sbjct: 86  --------YRQLVFRGCLGSMNNTKARGGSTFFRLRKAAVVPDTVDWRDKGYVTDIKDQK 137

Query: 762 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-Q 818
            CGSCWAFS  G LEGQ   KTGKLV  S+ QLV+C+      GCDG   + + +Y    
Sbjct: 138 QCGSCWAFSATGSLEGQTFRKTGKLVSLSEQQLVDCSGSYGNYGCDGGLMDQAFQYIEAN 197

Query: 819 AGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVLL 877
            GL++E  YPY+  +GE   C ++ S V    TG   +       +++ +   GP+SV +
Sbjct: 198 KGLDTEDSYPYEAQDGE---CRFNPSTVGASCTGYVDIASGDESALQEAVATIGPISVAI 254

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           ++        +    N+  CS  +L H VL VGYG  +   YW+V+NSWG     +G+  
Sbjct: 255 DAGHSSFQLYSSGVYNEPDCSSSELDHGVLAVGYGSSNGDDYWIVKNSWGLDWGVQGYIL 314

Query: 938 IERG-NNACGIEQIAGYATI 956
           + R  +N CGI   A Y  +
Sbjct: 315 MSRNKSNQCGIATAASYPLV 334



 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 144/321 (44%), Gaps = 33/321 (10%)

Query: 292 FKAFIVKRGRQYANDEEIKER------------FEYFKQDGHKKHERYGTSEFSDRSPEE 339
           F A+ +K G+ Y + EE   R                  D   K  R G + F+D S EE
Sbjct: 26  FHAWKLKFGKSYRSAEEESHRQLTWLTNRKLVLVHNMMADQGLKSYRLGMTYFADMSNEE 85

Query: 340 ILCKTGFKWSERTYERIVADREKVE----KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 395
                   + +  +   +      +         + K   VPD  DWR K       DQ 
Sbjct: 86  --------YRQLVFRGCLGSMNNTKARGGSTFFRLRKAAVVPDTVDWRDKGYVTDIKDQK 137

Query: 396 ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYTH- 452
            CGSCWAFS  G LEGQ   KTGKLV  S+ QLV+C+    G  GCDG  ++Q  +Y   
Sbjct: 138 QCGSCWAFSATGSLEGQTFRKTGKLVSLSEQQLVDCSGS-YGNYGCDGGLMDQAFQYIEA 196

Query: 453 QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLF-TGKDFLYFNGSETMKKILYKYGPLSVG 511
             GL++E  YPY   +GE   C ++ S V    TG   +       +++ +   GP+SV 
Sbjct: 197 NKGLDTEDSYPYEAQDGE---CRFNPSTVGASCTGYVDIASGDESALQEAVATIGPISVA 253

Query: 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           +++    F   +    N+  CS  +L H VL VGYG  +   YW+ +NSWG     +G+ 
Sbjct: 254 IDAGHSSFQLYSSGVYNEPDCSSSELDHGVLAVGYGSSNGDDYWIVKNSWGLDWGVQGYI 313

Query: 572 KIERG-NNACGIEQIAGYATI 591
            + R  +N CGI   A Y  +
Sbjct: 314 LMSRNKSNQCGIATAASYPLV 334



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 115/229 (50%), Gaps = 8/229 (3%)

Query: 2   LMEVEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
              + K   VPD  DWR K       DQ  CGSCWAFS  G LEGQ   KTGKLV  S+ 
Sbjct: 109 FFRLRKAAVVPDTVDWRDKGYVTDIKDQKQCGSCWAFSATGSLEGQTFRKTGKLVSLSEQ 168

Query: 62  QLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 118
           QLV+C+      GCDG   + + +Y     GL++E  YPY+  +GE   C ++ S V   
Sbjct: 169 QLVDCSGSYGNYGCDGGLMDQAFQYIEANKGLDTEDSYPYEAQDGE---CRFNPSTVGAS 225

Query: 119 -TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 177
            TG   +       +++ +   GP+SV +++        +    N+  CS  +L H VL 
Sbjct: 226 CTGYVDIASGDESALQEAVATIGPISVAIDAGHSSFQLYSSGVYNEPDCSSSELDHGVLA 285

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 225
           VGYG  +   YW+V+NSWG     +G+  + R  +N CGI   A Y  +
Sbjct: 286 VGYGSSNGDDYWIVKNSWGLDWGVQGYILMSRNKSNQCGIATAASYPLV 334



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 16/107 (14%)

Query: 934  GFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSPYDLGHAVLLVG 978
            G+  I  G+ +   E +A    I V               V N+  CS  +L H VL VG
Sbjct: 228  GYVDIASGDESALQEAVATIGPISVAIDAGHSSFQLYSSGVYNEPDCSSSELDHGVLAVG 287

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 1024
            YG  +   YW+V+NSWG     +G+  + R  +N CGI   A Y  +
Sbjct: 288  YGSSNGDDYWIVKNSWGLDWGVQGYILMSRNKSNQCGIATAASYPLV 334


>gi|44844204|emb|CAF32698.1| cysteine proteinase [Leishmania infantum]
          Length = 443

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 140/303 (46%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWR+K    P     ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKXXGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE--YTHQAGLE-S 823
           WAFS  G +E Q+A     LV  S+ QLV C  + +GC+G     + E    H  G+  +
Sbjct: 151 WAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEXLLRHMYGIVFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           EK YPY + NG+  +C      V       ++    +ET M   L + GP+++ +++   
Sbjct: 211 EKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY K   +PYW+++NSWG    ++G+ ++  G 
Sbjct: 271 MSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVVMGX 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 140/304 (46%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWR+K    P     ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKXXGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIE--YTHQAGLE- 457
           WAFS  G +E Q+A     LV  S+ QLV C  + +GC G   L Q  E    H  G+  
Sbjct: 151 WAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLML-QAFEXLLRHMYGIVF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +EK YPY +GNG+  +C      V       ++    +ET M   L + GP+++ +++  
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY K   +PYW+ +NSWG    ++G+ ++  G
Sbjct: 270 FMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVVMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 XNAC 329



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWR+K    P      CGSCWAFS  G +E Q+A     LV  S+ QLV C  + 
Sbjct: 126 VPDAVDWREKGAVTPVKXXGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKD 185

Query: 71  SGCDGCFFEPSIE--YTHQAGLE-SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +GC+G     + E    H  G+  +EK YPY + NG+  +C      V       ++   
Sbjct: 186 NGCNGGLMLQAFEXLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            +ET M   L + GP+++ +++     Y    +     +C+   L H VLLVGY K   +
Sbjct: 246 SNETVMAAWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGEDWGEKGYVRVVMGXNAC 329


>gi|6649595|gb|AAF21471.1|U85984_1 cysteine proteinase [Clonorchis sinensis]
          Length = 217

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 111/214 (51%), Gaps = 3/214 (1%)

Query: 378 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 437
           D +DWR     GP  DQ  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C     G
Sbjct: 6   DNFDWRNHGAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDGVDEG 65

Query: 438 CGGCDGLEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET 497
           C G    +   +     GL+ + DYPY    G + +C    SKVK++     +     + 
Sbjct: 66  CNGGTPQQAFKQILGMGGLQLDSDYPYE---GREGQCRMVPSKVKVYINGSKILPEDEQI 122

Query: 498 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLA 557
             ++L + GPLS  LN+  + FY    +      C    L HAVL VGYGK+  +PYW  
Sbjct: 123 QAQMLKETGPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGYGKEGRLPYWTV 182

Query: 558 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           +NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 183 KNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 216



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 4/214 (1%)

Query: 13  DAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 72
           D +DWR     GP  DQ DCGSCWAFS  G +EGQ+  KT  L++ S+ QL++C     G
Sbjct: 6   DNFDWRNHGAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDGVDEG 65

Query: 73  CDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 131
           C+G   + +  +     GL+ + DYPY+   G + +C    SKVK++     +     + 
Sbjct: 66  CNGGTPQQAFKQILGMGGLQLDSDYPYE---GREGQCRMVPSKVKVYINGSKILPEDEQI 122

Query: 132 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 191
             ++L + GPLS  LN+  +  Y    +      C    L HAVL VGYGK+  +PYW V
Sbjct: 123 QAQMLKETGPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGYGKEGRLPYWTV 182

Query: 192 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           +NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 183 KNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 216



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 114/214 (53%), Gaps = 4/214 (1%)

Query: 744 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 803
           D +DWR     GP  DQ  CGSCWAFS  G +EGQ+  KT  L++ S+ QL++C     G
Sbjct: 6   DNFDWRNHGAVGPVLDQGDCGSCWAFSAVGNIEGQWFRKTDNLLQLSEQQLLDCDGVDEG 65

Query: 804 CDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 862
           C+G   + +  +     GL+ + DYPY+   G + +C    SKVK++     +     + 
Sbjct: 66  CNGGTPQQAFKQILGMGGLQLDSDYPYE---GREGQCRMVPSKVKVYINGSKILPEDEQI 122

Query: 863 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 922
             ++L + GPLS  LN+  +  Y    +      C    L HAVL VGYGK+  +PYW V
Sbjct: 123 QAQMLKETGPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVLTVGYGKEGRLPYWTV 182

Query: 923 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           +NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 183 KNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 216



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 1024
            C    L HAVL VGYGK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 157  CDAQSLNHAVLTVGYGKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 216


>gi|374414520|pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From
           Tenebrio Molitor Larval Midgut
 gi|374414521|pdb|3QJ3|B Chain B, Structure Of Digestive Procathepsin L2 Proteinase From
           Tenebrio Molitor Larval Midgut
          Length = 331

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 154/322 (47%), Gaps = 27/322 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEE-------IKERFEYFKQDGHKKHE-----RYGTSEFSDR 701
           + E ++ F     R Y N +E        +++ E F++   K  +       G + F+D 
Sbjct: 18  VAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDM 77

Query: 702 SPEEILCKT-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
           +PEE+   T G       ++  +  + + +  L    +    P ++DWR + +  P  +Q
Sbjct: 78  TPEEMKAYTHGLIMPADLHKNGIPIKTREDLGLNASVR---YPASFDWRDQGMVSPVKNQ 134

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS--QLVECAKQCSGCDGCFFEPSIEYTHQ 818
            +CGS WAFS  G +E Q  I  G   + S S  QLV+C     GC G +   +  Y  Q
Sbjct: 135 GSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPNALGCSGGWMNDAFTYVAQ 194

Query: 819 -AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVL 876
             G++SE  YPY+ A+G    C YD ++V    +G  +L       +  ++   GP++V 
Sbjct: 195 NGGIDSEGAYPYEMADG---NCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAVA 251

Query: 877 LNSD-LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
            ++D     Y+G      + TC      HAVL+VGYG ++   YWLV+NSWG     +G+
Sbjct: 252 FDADDPFGSYSGGVYY--NPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGY 309

Query: 936 FKIER-GNNACGIEQIAGYATI 956
           FKI R  NN CGI  +A   T+
Sbjct: 310 FKIARNANNHCGIAGVASVPTL 331



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 114/220 (51%), Gaps = 11/220 (5%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS--QLVECAKQ 69
           P ++DWR + +  P  +Q  CGS WAFS  G +E Q  I  G   + S S  QLV+C   
Sbjct: 117 PASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPN 176

Query: 70  CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFN 127
             GC G +   +  Y  Q  G++SE  YPY+ A+G    C YD ++V    +G  +L   
Sbjct: 177 ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADG---NCHYDPNQVAARLSGYVYLSGP 233

Query: 128 GSETMKKILYKYGPLSVLLNSD-LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
               +  ++   GP++V  ++D     Y+G      + TC      HAVL+VGYG ++  
Sbjct: 234 DENMLADMVATKGPVAVAFDADDPFGSYSGGVYY--NPTCETNKFTHAVLIVGYGNENGQ 291

Query: 187 PYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
            YWLV+NSWG     +G+FKI R  NN CGI  +A   T+
Sbjct: 292 DYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVASVPTL 331



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 149/323 (46%), Gaps = 28/323 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEE-------IKERFEYFKQDGHKKHE-----RYGTSEFSDR 335
           + E ++ F     R Y N +E        +++ E F++   K  +       G + F+D 
Sbjct: 18  VAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDM 77

Query: 336 SPEEILCKT-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
           +PEE+   T G       ++  +  + + +  L    +    P ++DWR + +  P  +Q
Sbjct: 78  TPEEMKAYTHGLIMPADLHKNGIPIKTREDLGLNASVR---YPASFDWRDQGMVSPVKNQ 134

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKS--QLVECAKQCSGCGGCDGLEQPIEYTH 452
            +CGS WAFS  G +E Q  I  G   + S S  QLV+C     GC G   +     Y  
Sbjct: 135 GSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPNALGCSG-GWMNDAFTYVA 193

Query: 453 Q-AGLESEKDYPYRNGNGEKFKCAYDKSKVKL-FTGKDFLYFNGSETMKKILYKYGPLSV 510
           Q  G++SE  YPY   +G    C YD ++V    +G  +L       +  ++   GP++V
Sbjct: 194 QNGGIDSEGAYPYEMADG---NCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAV 250

Query: 511 GLNSH-LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEG 569
             ++      Y+G      + TC      HAVL+VGYG ++   YWL +NSWG     +G
Sbjct: 251 AFDADDPFGSYSGGVYY--NPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDG 308

Query: 570 FFKIER-GNNACGIEQIAGYATI 591
           +FKI R  NN CGI  +A   T+
Sbjct: 309 YFKIARNANNHCGIAGVASVPTL 331



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAG 1020
            + TC      HAVL+VGYG ++   YWLV+NSWG     +G+FKI R  NN CGI  +A 
Sbjct: 268  NPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVAS 327

Query: 1021 YATI 1024
              T+
Sbjct: 328  VPTL 331


>gi|355687683|gb|EHH26267.1| hypothetical protein EGK_16186 [Macaca mulatta]
 gi|384945482|gb|AFI36346.1| cathepsin O preproprotein [Macaca mulatta]
          Length = 321

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 143/295 (48%), Gaps = 27/295 (9%)

Query: 664 KRGRQY--ANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTY 719
           +R R++  A   E   R  Y      G      YG ++FS   PEE          +  Y
Sbjct: 34  QRSREHEAAAFRESLNRHRYLNSLSPGENSTAFYGINQFSYLFPEEF---------KAIY 84

Query: 720 ERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 776
            R  +   K  +   EV +  P    P  +DWR K+V     +Q  CG CWAFS+ G +E
Sbjct: 85  LR--SKPSKFPRYSAEVHRSIPNVSWPLRFDWRDKHVVTQVRNQQTCGGCWAFSVVGAVE 142

Query: 777 GQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG 834
             YAIK   L + S  Q+++C+    GC+G     ++ + +  Q  L  + +YP+K  NG
Sbjct: 143 SAYAIKGKPLEDLSVQQVIDCSYTNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNG 202

Query: 835 --EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK 892
               F  ++    +K ++  DF   N  + M K L  +GPL V++++    DY G  I+ 
Sbjct: 203 LCHYFSGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQH 260

Query: 893 NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           +   CS  +  HAVL+ G+ K  + PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 261 H---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 114/209 (54%), Gaps = 9/209 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  +DWR K+V     +Q  CG CWAFS+ G +E  YAIK   L + S  Q+++C+    
Sbjct: 109 PLRFDWRDKHVVTQVRNQQTCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYTNY 168

Query: 72  GCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFN 127
           GC+G     ++ + +  Q  L  + +YP+K  NG    F  ++    +K ++  DF   N
Sbjct: 169 GCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFS--N 226

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + M K L  +GPL V++++    DY G  I+ +   CS  +  HAVL+ G+ K  + P
Sbjct: 227 QEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGFDKTGSTP 283

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           YW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 284 YWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 138/296 (46%), Gaps = 28/296 (9%)

Query: 298 KRGRQY--ANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTY 353
           +R R++  A   E   R  Y      G      YG ++FS   PEE          +  Y
Sbjct: 34  QRSREHEAAAFRESLNRHRYLNSLSPGENSTAFYGINQFSYLFPEEF---------KAIY 84

Query: 354 ERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 410
            R  +   K  +   EV +  P    P  +DWR K+V     +Q  CG CWAFS+ G +E
Sbjct: 85  LR--SKPSKFPRYSAEVHRSIPNVSWPLRFDWRDKHVVTQVRNQQTCGGCWAFSVVGAVE 142

Query: 411 GQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH--QAGLESEKDYPYRNGN 468
             YAIK   L + S  Q+++C+    GC G   L   + + +  Q  L  + +YP++  N
Sbjct: 143 SAYAIKGKPLEDLSVQQVIDCSYTNYGCNGGSTL-NALNWLNKMQVKLVKDSEYPFKAQN 201

Query: 469 G--EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIR 526
           G    F  ++    +K ++  DF   N  + M K L  +GPL V +++     Y G  I+
Sbjct: 202 GLCHYFSGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQ 259

Query: 527 KNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
            +   CS  +  HAVL+ G+ K    PYW+ RNSWG     +G+  ++ G+N CGI
Sbjct: 260 HH---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS  +  HAVL+ G+ K    PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 262  CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312


>gi|37788267|gb|AAO64473.1| cathepsin H precursor [Fundulus heteroclitus]
          Length = 345

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 116/219 (52%), Gaps = 17/219 (7%)

Query: 739 DGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 797
           +GP PD+ DWRKK N   P   Q +CGSCW FS  G LE   AI T KLV  S+ QLV+C
Sbjct: 125 EGPQPDSIDWRKKGNYITPVKTQGSCGSCWTFSTTGCLESVTAIATVKLVPLSEQQLVDC 184

Query: 798 AKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 854
           A+  +  GC+G     + EY  +  GL +E+DYPYK   G    C+Y  S    F  K+ 
Sbjct: 185 AQDFNNHGCNGGLPSQAFEYIMYNKGLMTEQDYPYKFVEG---ICSYKPSLAAAFV-KEV 240

Query: 855 LHFNGSETMKKI--LYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLL 908
            +    + M  +  +    P+S    +  D +H   G        TC  +   + HAVL 
Sbjct: 241 RNITAYDEMGMVDAVGTLNPVSFAFEVTDDFMHYREGV---YTSTTCHNTTDKVNHAVLA 297

Query: 909 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           VGYG++   PYW+V+NSWG     +G+F IERG N CG+
Sbjct: 298 VGYGQEKGTPYWIVKNSWGSSWGIDGYFLIERGKNMCGL 336



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 115/219 (52%), Gaps = 17/219 (7%)

Query: 8   DGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +GP PD+ DWRKK N   P   Q  CGSCW FS  G LE   AI T KLV  S+ QLV+C
Sbjct: 125 EGPQPDSIDWRKKGNYITPVKTQGSCGSCWTFSTTGCLESVTAIATVKLVPLSEQQLVDC 184

Query: 67  AKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 123
           A+  +  GC+G     + EY  +  GL +E+DYPYK   G    C+Y  S    F  K+ 
Sbjct: 185 AQDFNNHGCNGGLPSQAFEYIMYNKGLMTEQDYPYKFVEG---ICSYKPSLAAAFV-KEV 240

Query: 124 LHFNGSETMKKI--LYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLL 177
            +    + M  +  +    P+S    +  D +H   G        TC  +   + HAVL 
Sbjct: 241 RNITAYDEMGMVDAVGTLNPVSFAFEVTDDFMHYREGV---YTSTTCHNTTDKVNHAVLA 297

Query: 178 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           VGYG++   PYW+V+NSWG     +G+F IERG N CG+
Sbjct: 298 VGYGQEKGTPYWIVKNSWGSSWGIDGYFLIERGKNMCGL 336



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 113/219 (51%), Gaps = 16/219 (7%)

Query: 373 DGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 431
           +GP PD+ DWRKK N   P   Q +CGSCW FS  G LE   AI T KLV  S+ QLV+C
Sbjct: 125 EGPQPDSIDWRKKGNYITPVKTQGSCGSCWTFSTTGCLESVTAIATVKLVPLSEQQLVDC 184

Query: 432 AKQCSGCGGCDGL-EQPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDF 489
           A+  +  G   GL  Q  EY  +  GL +E+DYPY+   G    C+Y  S    F  K+ 
Sbjct: 185 AQDFNNHGCNGGLPSQAFEYIMYNKGLMTEQDYPYKFVEG---ICSYKPSLAAAFV-KEV 240

Query: 490 LYFNGSETMKKI--LYKYGPLSVG--LNSHLIHFYNGTPIRKNDETC--SPYDLGHAVLL 543
                 + M  +  +    P+S    +    +H+  G        TC  +   + HAVL 
Sbjct: 241 RNITAYDEMGMVDAVGTLNPVSFAFEVTDDFMHYREGV---YTSTTCHNTTDKVNHAVLA 297

Query: 544 VGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
           VGYG++   PYW+ +NSWG     +G+F IERG N CG+
Sbjct: 298 VGYGQEKGTPYWIVKNSWGSSWGIDGYFLIERGKNMCGL 336



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 33/46 (71%)

Query: 970  LGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            + HAVL VGYG++   PYW+V+NSWG     +G+F IERG N CG+
Sbjct: 291  VNHAVLAVGYGQEKGTPYWIVKNSWGSSWGIDGYFLIERGKNMCGL 336


>gi|145351119|ref|XP_001419933.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580166|gb|ABO98226.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 272

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 126/254 (49%), Gaps = 29/254 (11%)

Query: 715 SERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGM 774
           SE   +R     E +E + +E      +P+ +DWR K       DQ  CGSCW FS  G 
Sbjct: 22  SEEREKRKARGGETLETLPVE-----HLPEEFDWRFKGAVTRVKDQGQCGSCWTFSTTGA 76

Query: 775 LEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY-THQAGLESE 824
           +EG + I TGKLVE S+ QLV+C   C         SGC+G     ++EY     G+++E
Sbjct: 77  IEGAHFISTGKLVELSEQQLVDCDVGCDPDVPNACDSGCNGGLPSNAMEYIVEHGGIDTE 136

Query: 825 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIH 883
           K YPY    GEK +C   K K+   T K+F   +  E  M   L KYGPLS+ +N+  + 
Sbjct: 137 KSYPYV---GEKGECKAKKGKLGA-TLKNFSFVSDDEKQMAAALVKYGPLSIGINAAWMQ 192

Query: 884 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI-------PYWLVRNSWGPIGPDEGFF 936
            Y G         C    L H VL+VGYG            PYW+V+NSW P   + G++
Sbjct: 193 SYIGG--VACPWLCDAESLDHGVLIVGYGSSGFAPVRWAPEPYWIVKNSWSPAWGEGGYY 250

Query: 937 KIERGNNACGIEQI 950
           +I +   +CGI  +
Sbjct: 251 RICKDKGSCGINNM 264



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 116/227 (51%), Gaps = 24/227 (10%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P+ +DWR K       DQ  CGSCW FS  G +EG + I TGKLVE S+ QLV+C   C
Sbjct: 44  LPEEFDWRFKGAVTRVKDQGQCGSCWTFSTTGAIEGAHFISTGKLVELSEQQLVDCDVGC 103

Query: 71  ---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 120
                    SGC+G     ++EY     G+++EK YPY    GEK +C   K K+   T 
Sbjct: 104 DPDVPNACDSGCNGGLPSNAMEYIVEHGGIDTEKSYPYV---GEKGECKAKKGKLGA-TL 159

Query: 121 KDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 179
           K+F   +  E  M   L KYGPLS+ +N+  +  Y G         C    L H VL+VG
Sbjct: 160 KNFSFVSDDEKQMAAALVKYGPLSIGINAAWMQSYIGG--VACPWLCDAESLDHGVLIVG 217

Query: 180 YGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 219
           YG            PYW+V+NSW P   + G+++I +   +CGI  +
Sbjct: 218 YGSSGFAPVRWAPEPYWIVKNSWSPAWGEGGYYRICKDKGSCGINNM 264



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 128/256 (50%), Gaps = 32/256 (12%)

Query: 349 SERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGM 408
           SE   +R     E +E + +E      +P+ +DWR K       DQ  CGSCW FS  G 
Sbjct: 22  SEEREKRKARGGETLETLPVE-----HLPEEFDWRFKGAVTRVKDQGQCGSCWTFSTTGA 76

Query: 409 LEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCGGCDGL-EQPIEY-THQAGLE 457
           +EG + I TGKLVE S+ QLV+C   C         SGC G  GL    +EY     G++
Sbjct: 77  IEGAHFISTGKLVELSEQQLVDCDVGCDPDVPNACDSGCNG--GLPSNAMEYIVEHGGID 134

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHL 516
           +EK YPY    GEK +C   K K+   T K+F + +  E  M   L KYGPLS+G+N+  
Sbjct: 135 TEKSYPYV---GEKGECKAKKGKLGA-TLKNFSFVSDDEKQMAAALVKYGPLSIGINAAW 190

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYG-------KQDDIPYWLARNSWGPIGPDEG 569
           +  Y G         C    L H VL+VGYG       +    PYW+ +NSW P   + G
Sbjct: 191 MQSYIGG--VACPWLCDAESLDHGVLIVGYGSSGFAPVRWAPEPYWIVKNSWSPAWGEGG 248

Query: 570 FFKIERGNNACGIEQI 585
           +++I +   +CGI  +
Sbjct: 249 YYRICKDKGSCGINNM 264



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 7/61 (11%)

Query: 965  CSPYDLGHAVLLVGYG-------KQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 1017
            C    L H VL+VGYG       +    PYW+V+NSW P   + G+++I +   +CGI  
Sbjct: 204  CDAESLDHGVLIVGYGSSGFAPVRWAPEPYWIVKNSWSPAWGEGGYYRICKDKGSCGINN 263

Query: 1018 I 1018
            +
Sbjct: 264  M 264


>gi|402870704|ref|XP_003899346.1| PREDICTED: cathepsin O [Papio anubis]
          Length = 321

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 143/295 (48%), Gaps = 27/295 (9%)

Query: 664 KRGRQY--ANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTY 719
           +R R++  A   E   R  Y      G      YG ++FS   PEE          +  Y
Sbjct: 34  QRSREHEAAAFRESLNRHRYLNSLSPGENSTAFYGINQFSYLFPEEF---------KAIY 84

Query: 720 ERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 776
            R  +   K  +   EV +  P    P  +DWR K+V     +Q  CG CWAFS+ G +E
Sbjct: 85  LR--SKPSKFPRYSAEVHRSIPNVSWPLRFDWRDKHVVTQVRNQQTCGGCWAFSVVGAVE 142

Query: 777 GQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG 834
             YAIK   L + S  Q+++C+    GC+G     ++ + +  Q  L  + +YP+K  NG
Sbjct: 143 SAYAIKGKPLEDLSVQQVIDCSYTNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNG 202

Query: 835 --EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK 892
               F  ++    +K ++  DF   N  + M K L  +GPL V++++    DY G  I+ 
Sbjct: 203 LCHYFSGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQH 260

Query: 893 NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
           +   CS  +  HAVL+ G+ K  + PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 261 H---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 114/209 (54%), Gaps = 9/209 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 71
           P  +DWR K+V     +Q  CG CWAFS+ G +E  YAIK   L + S  Q+++C+    
Sbjct: 109 PLRFDWRDKHVVTQVRNQQTCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYTNY 168

Query: 72  GCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFN 127
           GC+G     ++ + +  Q  L  + +YP+K  NG    F  ++    +K ++  DF   N
Sbjct: 169 GCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFS--N 226

Query: 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 187
             + M K L  +GPL V++++    DY G  I+ +   CS  +  HAVL+ G+ K  + P
Sbjct: 227 QEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGFDKTGSTP 283

Query: 188 YWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           YW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 284 YWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 138/296 (46%), Gaps = 28/296 (9%)

Query: 298 KRGRQY--ANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTY 353
           +R R++  A   E   R  Y      G      YG ++FS   PEE          +  Y
Sbjct: 34  QRSREHEAAAFRESLNRHRYLNSLSPGENSTAFYGINQFSYLFPEEF---------KAIY 84

Query: 354 ERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLE 410
            R  +   K  +   EV +  P    P  +DWR K+V     +Q  CG CWAFS+ G +E
Sbjct: 85  LR--SKPSKFPRYSAEVHRSIPNVSWPLRFDWRDKHVVTQVRNQQTCGGCWAFSVVGAVE 142

Query: 411 GQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH--QAGLESEKDYPYRNGN 468
             YAIK   L + S  Q+++C+    GC G   L   + + +  Q  L  + +YP++  N
Sbjct: 143 SAYAIKGKPLEDLSVQQVIDCSYTNYGCNGGSTL-NALNWLNKMQVKLVKDSEYPFKAQN 201

Query: 469 G--EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIR 526
           G    F  ++    +K ++  DF   N  + M K L  +GPL V +++     Y G  I+
Sbjct: 202 GLCHYFSGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQ 259

Query: 527 KNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
            +   CS  +  HAVL+ G+ K    PYW+ RNSWG     +G+  ++ G+N CGI
Sbjct: 260 HH---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS  +  HAVL+ G+ K    PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 262  CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312


>gi|56553473|gb|AAV97878.1| recombinant cysteine protease [Cloning vector pQ-CPB]
          Length = 335

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 40/314 (12%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 30  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 89

Query: 710 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 90  YLSGATHFAKAKKFASQYYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 136

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---TH 817
             CGSCWAFS  G +E ++ + T  L+  S+ +LV C     GC+G     + ++     
Sbjct: 137 GMCGSCWAFSAIGNIESKWYLATHSLISLSEQELVSCDDVDEGCNGGLMGQAFDWLLNNR 196

Query: 818 QAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHFNGSETMKKILYKYGPLSV 875
              + +   YPY + NG   +C+     V      G   +  N  +TM   L   GP+++
Sbjct: 197 NGAVYTGASYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESN-EDTMAAWLAANGPIAI 255

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
            +++     Y G  +     +C    L H VLLVGY     +PYW+++NSWG    ++G+
Sbjct: 256 AVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGEVPYWVIKNSWGENWGEKGY 311

Query: 936 FKIERGNNACGIEQ 949
            ++ +G N C I++
Sbjct: 312 VRVRKGTNECLIQE 325



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 39/314 (12%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 30  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 89

Query: 344 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 90  YLSGATHFAKAKKFASQYYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 136

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---T 451
             CGSCWAFS  G +E ++ + T  L+  S+ +LV C     GC G   + Q  ++    
Sbjct: 137 GMCGSCWAFSAIGNIESKWYLATHSLISLSEQELVSCDDVDEGCNG-GLMGQAFDWLLNN 195

Query: 452 HQAGLESEKDYPYRNGNGEKFKCAYDKSKV-KLFTGKDFLYFNGSETMKKILYKYGPLSV 510
               + +   YPY +GNG   +C+     V   +        +  +TM   L   GP+++
Sbjct: 196 RNGAVYTGASYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAI 255

Query: 511 GLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGF 570
            +++     Y G  +     +C    L H VLLVGY    ++PYW+ +NSWG    ++G+
Sbjct: 256 AVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGEVPYWVIKNSWGENWGEKGY 311

Query: 571 FKIERGNNACGIEQ 584
            ++ +G N C I++
Sbjct: 312 VRVRKGTNECLIQE 325



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 10/213 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
            P A DWR+K    P  DQ  CGSCWAFS  G +E ++ + T  L+  S+ +LV C    
Sbjct: 118 APAAVDWREKGAVTPVKDQGMCGSCWAFSAIGNIESKWYLATHSLISLSEQELVSCDDVD 177

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLH 125
            GC+G     + ++        + +   YPY + NG   +C+     V      G   + 
Sbjct: 178 EGCNGGLMGQAFDWLLNNRNGAVYTGASYPYVSGNGSVPECSESSDLVIGAYIDGHVTIE 237

Query: 126 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
            N  +TM   L   GP+++ +++     Y G  +     +C    L H VLLVGY     
Sbjct: 238 SN-EDTMAAWLAANGPIAIAVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYNMTGE 292

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 218
           +PYW+++NSWG    ++G+ ++ +G N C I++
Sbjct: 293 VPYWVIKNSWGENWGEKGYVRVRKGTNECLIQE 325


>gi|195123821|ref|XP_002006400.1| GI18587 [Drosophila mojavensis]
 gi|193911468|gb|EDW10335.1| GI18587 [Drosophila mojavensis]
          Length = 366

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 167/355 (47%), Gaps = 37/355 (10%)

Query: 257 LPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYAN--DEEIKERFE 314
           L +  +++  +V   V TL    +LT      ++ F  F+ + G+ YA+  D +++ER  
Sbjct: 29  LGNAANQLHQKVSQLVSTLPSPPALT-----DVKNFGDFLAQSGKTYASAADRQLRERIF 83

Query: 315 YFKQD----------GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKV 363
             +++          G  K      + F+D +  E L + TG + S    +       K+
Sbjct: 84  GARKNLVDATNAAFKGGAKTYELAVNAFADLTKAEFLKQLTGLRKSSSGEQN-----AKM 138

Query: 364 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 423
            ++   +     +PD++DWR+K    P   Q  CGSCW+F+  G +EG    KTGKL   
Sbjct: 139 HRLAPNLAAKEKLPDSFDWREKGGVTPVKFQGDCGSCWSFAATGAIEGHVFRKTGKLPNL 198

Query: 424 SKSQLVECAKQCSGCGGCDGLEQPIEYT---HQAGLESEKDYPYRNGNGEKFKCAYDKS- 479
           S+  LV+C  +  G  GCDG  Q   +     Q G+     YPY +   +K  C Y  S 
Sbjct: 199 SEQNLVDCGPRDLGLDGCDGGYQEYAFNFVKEQDGIAVGSKYPYVD---KKDTCKYTSSL 255

Query: 480 KVKLFTGKDFLYFNGSETMKKILYKYGPLSV---GLNSHLIHFYNGTPIRKNDETCSPYD 536
                TG   +     + MK ++   GPL+    GL S L+ +  G      DE C+  +
Sbjct: 256 SGAQITGFAVIPPKDEQAMKTVIATQGPLACSVYGLES-LLLYKRGI---YADEECNNGE 311

Query: 537 LGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           + H+VL+VGYG ++   +W+ +NSW  I  ++G+F++ RG N CGI     Y  +
Sbjct: 312 VNHSVLVVGYGSENGQDFWIVKNSWDKIWGEDGYFRLPRGKNFCGIATECSYPIV 366



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 167/355 (47%), Gaps = 38/355 (10%)

Query: 623 LPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYAN--DEEIKERFE 680
           L +  +++  +V   V TL    +LT      ++ F  F+ + G+ YA+  D +++ER  
Sbjct: 29  LGNAANQLHQKVSQLVSTLPSPPALT-----DVKNFGDFLAQSGKTYASAADRQLRERIF 83

Query: 681 YFKQD----------GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKV 729
             +++          G  K      + F+D +  E L + TG + S    +       K+
Sbjct: 84  GARKNLVDATNAAFKGGAKTYELAVNAFADLTKAEFLKQLTGLRKSSSGEQN-----AKM 138

Query: 730 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEF 789
            ++   +     +PD++DWR+K    P   Q  CGSCW+F+  G +EG    KTGKL   
Sbjct: 139 HRLAPNLAAKEKLPDSFDWREKGGVTPVKFQGDCGSCWSFAATGAIEGHVFRKTGKLPNL 198

Query: 790 SKSQLVECAKQ---CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKS- 844
           S+  LV+C  +     GCDG + E +  +   Q G+     YPY +   +K  C Y  S 
Sbjct: 199 SEQNLVDCGPRDLGLDGCDGGYQEYAFNFVKEQDGIAVGSKYPYVD---KKDTCKYTSSL 255

Query: 845 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVL---LNSDLIHDYNGTPIRKNDETCSPYD 901
                TG   +     + MK ++   GPL+     L S L++          DE C+  +
Sbjct: 256 SGAQITGFAVIPPKDEQAMKTVIATQGPLACSVYGLESLLLYKRG----IYADEECNNGE 311

Query: 902 LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           + H+VL+VGYG ++   +W+V+NSW  I  ++G+F++ RG N CGI     Y  +
Sbjct: 312 VNHSVLVVGYGSENGQDFWIVKNSWDKIWGEDGYFRLPRGKNFCGIATECSYPIV 366



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 15/223 (6%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +PD++DWR+K    P   Q DCGSCW+F+  G +EG    KTGKL   S+  LV+C  + 
Sbjct: 151 LPDSFDWREKGGVTPVKFQGDCGSCWSFAATGAIEGHVFRKTGKLPNLSEQNLVDCGPRD 210

Query: 70  --CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 125
               GCDG + E +  +   Q G+     YPY +   +K  C Y  S      TG   + 
Sbjct: 211 LGLDGCDGGYQEYAFNFVKEQDGIAVGSKYPYVD---KKDTCKYTSSLSGAQITGFAVIP 267

Query: 126 FNGSETMKKILYKYGPLSVL---LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 182
               + MK ++   GPL+     L S L++          DE C+  ++ H+VL+VGYG 
Sbjct: 268 PKDEQAMKTVIATQGPLACSVYGLESLLLYKRG----IYADEECNNGEVNHSVLVVGYGS 323

Query: 183 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 225
           ++   +W+V+NSW  I  ++G+F++ RG N CGI     Y  +
Sbjct: 324 ENGQDFWIVKNSWDKIWGEDGYFRLPRGKNFCGIATECSYPIV 366



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 41/63 (65%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 1021
            DE C+  ++ H+VL+VGYG ++   +W+V+NSW  I  ++G+F++ RG N CGI     Y
Sbjct: 304  DEECNNGEVNHSVLVVGYGSENGQDFWIVKNSWDKIWGEDGYFRLPRGKNFCGIATECSY 363

Query: 1022 ATI 1024
              +
Sbjct: 364  PIV 366


>gi|332217574|ref|XP_003257933.1| PREDICTED: cathepsin O [Nomascus leucogenys]
          Length = 318

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 140/293 (47%), Gaps = 25/293 (8%)

Query: 664 KRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYER 721
            R R+ A   E   R  Y             YG ++FS   PEE          +  Y R
Sbjct: 33  SREREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEF---------KAIYLR 83

Query: 722 IVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQ 778
             +   K  +   EV    P   +P  +DWR K+V     +Q  CG CWAFS+ G +E  
Sbjct: 84  --SKPSKFPRYSAEVHMSIPNVSLPLKFDWRDKHVVTQVRNQQMCGGCWAFSVVGAVESA 141

Query: 779 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG-- 834
           YAIK   L + S  Q+++C+    GC+G     ++ + +  Q  L  + +YP+K  NG  
Sbjct: 142 YAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLC 201

Query: 835 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 894
             F  ++    +K ++  DF   N  + M K L  +GPL V++++    DY G  I+ + 
Sbjct: 202 HYFLGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH- 258

Query: 895 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
             CS  +  HAVL+ G+ K  + PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 259 --CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 115/210 (54%), Gaps = 9/210 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K+V     +Q  CG CWAFS+ G +E  YAIK   L + S  Q+++C+   
Sbjct: 105 LPLKFDWRDKHVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYNN 164

Query: 71  SGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHF 126
            GC+G     ++ + +  Q  L  + +YP+K  NG    F  ++    +K ++  DF   
Sbjct: 165 YGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFLGSHSGFSIKGYSAYDFS-- 222

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           N  + M K L  +GPL V++++    DY G  I+ +   CS  +  HAVL+ G+ K  + 
Sbjct: 223 NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGFDKTGST 279

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 280 PYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 26/294 (8%)

Query: 298 KRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYER 355
            R R+ A   E   R  Y             YG ++FS   PEE          +  Y R
Sbjct: 33  SREREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEF---------KAIYLR 83

Query: 356 IVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQ 412
             +   K  +   EV    P   +P  +DWR K+V     +Q  CG CWAFS+ G +E  
Sbjct: 84  --SKPSKFPRYSAEVHMSIPNVSLPLKFDWRDKHVVTQVRNQQMCGGCWAFSVVGAVESA 141

Query: 413 YAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH--QAGLESEKDYPYRNGNG- 469
           YAIK   L + S  Q+++C+    GC G   L   + + +  Q  L  + +YP++  NG 
Sbjct: 142 YAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNA-LNWLNKMQVKLVKDSEYPFKAQNGL 200

Query: 470 -EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKN 528
              F  ++    +K ++  DF   N  + M K L  +GPL V +++     Y G  I+ +
Sbjct: 201 CHYFLGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH 258

Query: 529 DETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
              CS  +  HAVL+ G+ K    PYW+ RNSWG     +G+  ++ G+N CGI
Sbjct: 259 ---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS  +  HAVL+ G+ K    PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 259  CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309


>gi|114596533|ref|XP_517502.2| PREDICTED: cathepsin O [Pan troglodytes]
 gi|410212082|gb|JAA03260.1| cathepsin O [Pan troglodytes]
 gi|410330245|gb|JAA34069.1| cathepsin O [Pan troglodytes]
          Length = 318

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 25/293 (8%)

Query: 664 KRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYER 721
            R R+ A   E   R  Y             YG ++FS   PEE          +  Y R
Sbjct: 33  SREREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEF---------KAIYLR 83

Query: 722 IVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQ 778
             +   K  +   EV    P   +P  +DWR K V     +Q  CG CWAFS+ G +E  
Sbjct: 84  --SKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESA 141

Query: 779 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG-- 834
           YAIK   L + S  Q+++C+    GC+G     ++ + +  Q  L  + +YP+K  NG  
Sbjct: 142 YAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLC 201

Query: 835 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 894
             F  ++    +K ++  DF   N  + M K L  +GPL V++++    DY G  I+ + 
Sbjct: 202 HYFSGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH- 258

Query: 895 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 947
             CS  +  HAVL+ G+ K  + PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 259 --CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           +P  +DWR K V     +Q  CG CWAFS+ G +E  YAIK   L + S  Q+++C+   
Sbjct: 105 LPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYNN 164

Query: 71  SGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHF 126
            GC+G     ++ + +  Q  L  + +YP+K  NG    F  ++    +K ++  DF   
Sbjct: 165 YGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFS-- 222

Query: 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
           N  + M K L  +GPL V++++    DY G  I+ +   CS  +  HAVL+ G+ K  + 
Sbjct: 223 NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGFDKTGST 279

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 216
           PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 280 PYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 134/294 (45%), Gaps = 26/294 (8%)

Query: 298 KRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYER 355
            R R+ A   E   R  Y             YG ++FS   PEE          +  Y R
Sbjct: 33  SREREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEF---------KAIYLR 83

Query: 356 IVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQ 412
             +   K  +   EV    P   +P  +DWR K V     +Q  CG CWAFS+ G +E  
Sbjct: 84  --SKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESA 141

Query: 413 YAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTH--QAGLESEKDYPYRNGNG- 469
           YAIK   L + S  Q+++C+    GC G   L   + + +  Q  L  + +YP++  NG 
Sbjct: 142 YAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNA-LNWLNKMQVKLVKDSEYPFKAQNGL 200

Query: 470 -EKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKN 528
              F  ++    +K ++  DF   N  + M K L  +GPL V +++     Y G  I+ +
Sbjct: 201 CHYFSGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH 258

Query: 529 DETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGI 582
              CS  +  HAVL+ G+ K    PYW+ RNSWG     +G+  ++ G+N CGI
Sbjct: 259 ---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 965  CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 1015
            CS  +  HAVL+ G+ K    PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 259  CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 309


>gi|168063167|ref|XP_001783545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664932|gb|EDQ51634.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 157/327 (48%), Gaps = 35/327 (10%)

Query: 649 FDNENIL-ETFKAFIVKRGRQYANDEEIKERFEYFKQD----GHKKHER---YGTSEFSD 700
            ++EN+L E F A+  K G+ Y + E+   RF  +K +     H +  R    G ++F+D
Sbjct: 44  LEHENLLLEQFAAWAHKHGKAYHDAEQCLHRFAVWKDNLAYIRHSETNRTYSLGLTKFAD 103

Query: 701 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGD 759
            + EE           R Y     DR +  K        D   P++ DWRK        D
Sbjct: 104 LTNEEF---------RRMYTGTRIDRSRRAKRRTGFRYADSEAPESVDWRKNGAVTSVKD 154

Query: 760 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-GCDGCFFEPSIEYTHQ 818
           Q +CGSCWAFS  G +EG  AI+ G+ V  S+ +LV+C  + + GC+G   + + ++  Q
Sbjct: 155 QGSCGSCWAFSAVGSVEGINAIRNGEAVSLSEQELVDCDLEYNQGCNGGLMDYAFDFIIQ 214

Query: 819 -AGLESEKDYPYKNANGEKFKCAYDKSKVKLFT--GKDFLHFNGSETMKKILYKYGPLSV 875
             G+++EKDYPYK  +G   +C   K    + T  G + +  N  E +KK +    P+SV
Sbjct: 215 NGGIDTEKDYPYKGFDG---RCDNSKKNAHVVTIDGYEDVPENDEEALKKAVAGQ-PVSV 270

Query: 876 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 935
            + +    D+           C   DL H VL VGYG +D + YW+V+NSWG    + G+
Sbjct: 271 AIEAGG-RDFQLYAQGVFSGECGT-DLDHGVLAVGYGTEDGVDYWIVKNSWGEYWGESGY 328

Query: 936 FKIER-------GNNACGIEQIAGYAT 955
            +++R       G   CGI     YA 
Sbjct: 329 LRMKRNMKDSNDGPGLCGINIEPSYAV 355



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 157/329 (47%), Gaps = 38/329 (11%)

Query: 283 FDNENIL-ETFKAFIVKRGRQYANDEEIKERFEYFKQD----GHKKHER---YGTSEFSD 334
            ++EN+L E F A+  K G+ Y + E+   RF  +K +     H +  R    G ++F+D
Sbjct: 44  LEHENLLLEQFAAWAHKHGKAYHDAEQCLHRFAVWKDNLAYIRHSETNRTYSLGLTKFAD 103

Query: 335 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGD 393
            + EE           R Y     DR +  K        D   P++ DWRK        D
Sbjct: 104 LTNEEF---------RRMYTGTRIDRSRRAKRRTGFRYADSEAPESVDWRKNGAVTSVKD 154

Query: 394 QAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIEYT 451
           Q +CGSCWAFS  G +EG  AI+ G+ V  S+ +LV+C  + +   GC+G  ++   ++ 
Sbjct: 155 QGSCGSCWAFSAVGSVEGINAIRNGEAVSLSEQELVDCDLEYN--QGCNGGLMDYAFDFI 212

Query: 452 HQ-AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFT--GKDFLYFNGSETMKKILYKYGPL 508
            Q  G+++EKDYPY+  +G   +C   K    + T  G + +  N  E +KK +    P+
Sbjct: 213 IQNGGIDTEKDYPYKGFDG---RCDNSKKNAHVVTIDGYEDVPENDEEALKKAVAGQ-PV 268

Query: 509 SVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDE 568
           SV + +    F        + E  +  DL H VL VGYG +D + YW+ +NSWG    + 
Sbjct: 269 SVAIEAGGRDFQLYAQGVFSGECGT--DLDHGVLAVGYGTEDGVDYWIVKNSWGEYWGES 326

Query: 569 GFFKIER-------GNNACGIEQIAGYAT 590
           G+ +++R       G   CGI     YA 
Sbjct: 327 GYLRMKRNMKDSNDGPGLCGINIEPSYAV 355



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 116/228 (50%), Gaps = 17/228 (7%)

Query: 8   DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA 67
           D   P++ DWRK        DQ  CGSCWAFS  G +EG  AI+ G+ V  S+ +LV+C 
Sbjct: 134 DSEAPESVDWRKNGAVTSVKDQGSCGSCWAFSAVGSVEGINAIRNGEAVSLSEQELVDCD 193

Query: 68  KQCS-GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFT--GKDF 123
            + + GC+G   + + ++  Q  G+++EKDYPYK  +G   +C   K    + T  G + 
Sbjct: 194 LEYNQGCNGGLMDYAFDFIIQNGGIDTEKDYPYKGFDG---RCDNSKKNAHVVTIDGYED 250

Query: 124 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
           +  N  E +KK +    P+SV + +    D+           C   DL H VL VGYG +
Sbjct: 251 VPENDEEALKKAVAGQ-PVSVAIEAGG-RDFQLYAQGVFSGECGT-DLDHGVLAVGYGTE 307

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIER-------GNNACGIEQIAGYAT 224
           D + YW+V+NSWG    + G+ +++R       G   CGI     YA 
Sbjct: 308 DGVDYWIVKNSWGEYWGESGYLRMKRNMKDSNDGPGLCGINIEPSYAV 355



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 7/62 (11%)

Query: 969  DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-------GNNACGIEQIAGY 1021
            DL H VL VGYG +D + YW+V+NSWG    + G+ +++R       G   CGI     Y
Sbjct: 294  DLDHGVLAVGYGTEDGVDYWIVKNSWGEYWGESGYLRMKRNMKDSNDGPGLCGINIEPSY 353

Query: 1022 AT 1023
            A 
Sbjct: 354  AV 355


>gi|50403821|gb|AAT76664.1| cathepsin L1 proteinase [Fasciola hepatica]
          Length = 326

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 110/216 (50%), Gaps = 12/216 (5%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPD  DWR+        DQ +CGSCWAFS  G  EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTTEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 71  --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 127
             +GC G   E + EY  Q GLE+E  YPY    G+   C + K   V   TG   +H  
Sbjct: 168 GNNGCGGGLMENAYEYLKQFGLETESSYPYTAVEGQ---CRHSKQLGVAKVTGYYTVHSG 224

Query: 128 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 185
               +K ++    P +V ++  SD +   +G       +TCSP  + HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGAERPAAVAVDVESDFMMYRSGI---YQSQTCSPLSVNHAVLAVGYGTQGG 281

Query: 186 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 220
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 317



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 109/216 (50%), Gaps = 12/216 (5%)

Query: 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801
           VPD  DWR+        DQ  CGSCWAFS  G  EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTTEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 802 --SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLHFN 858
             +GC G   E + EY  Q GLE+E  YPY    G+   C + K   V   TG   +H  
Sbjct: 168 GNNGCGGGLMENAYEYLKQFGLETESSYPYTAVEGQ---CRHSKQLGVAKVTGYYTVHSG 224

Query: 859 GSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 916
               +K ++    P +V ++  SD +   +G       +TCSP  + HAVL VGYG Q  
Sbjct: 225 SEVELKNLVGAERPAAVAVDVESDFMMYRSGI---YQSQTCSPLSVNHAVLAVGYGTQGG 281

Query: 917 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 951
             YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 282 TDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 317



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 111/218 (50%), Gaps = 15/218 (6%)

Query: 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 435
           VPD  DWR+        DQ  CGSCWAFS  G  EGQY       + FS+ QLV+C+   
Sbjct: 108 VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTTEGQYMKNERTSISFSEQQLVDCSGPW 167

Query: 436 SGCGGCDG--LEQPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKS-KVKLFTGKDFLYF 492
            G  GC G  +E   EY  Q GLE+E  YPY    G+   C + K   V   TG  +   
Sbjct: 168 -GNNGCGGGLMENAYEYLKQFGLETESSYPYTAVEGQ---CRHSKQLGVAKVTGY-YTVH 222

Query: 493 NGSET-MKKILYKYGPLSVGLN--SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549
           +GSE  +K ++    P +V ++  S  + + +G       +TCSP  + HAVL VGYG Q
Sbjct: 223 SGSEVELKNLVGAERPAAVAVDVESDFMMYRSGI---YQSQTCSPLSVNHAVLAVGYGTQ 279

Query: 550 DDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586
               YW+ +NSWG    + G+ ++ R   N CGI  +A
Sbjct: 280 GGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 317



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 17/102 (16%)

Query: 934  GFFKIERGN-----NACGIEQIAGYATIDV----------VKNDETCSPYDLGHAVLLVG 978
            G++ +  G+     N  G E+ A  A +DV          +   +TCSP  + HAVL VG
Sbjct: 217  GYYTVHSGSEVELKNLVGAERPAAVA-VDVESDFMMYRSGIYQSQTCSPLSVNHAVLAVG 275

Query: 979  YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 1019
            YG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 276  YGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 317


>gi|42564157|gb|AAS20590.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 322

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 146/314 (46%), Gaps = 33/314 (10%)

Query: 294 AFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER----------YGTSEFSDRSPEEIL 341
           AF    G+ Y +  E + RF  F+ +    +KH               ++F+D + +E  
Sbjct: 25  AFKQTHGKTYKSLLEERTRFGIFQNNLRTIEKHNAEYEEGKVTYYMAVTQFADMTRDEFR 84

Query: 342 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 401
            K G + + R           +   L    +D  +P+  DW +K    PA +Q  C SCW
Sbjct: 85  KKLGLQNNRRP---------NLNATLRVFPEDLELPEQIDWTEKGAVLPAKNQGNCRSCW 135

Query: 402 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG---LEQPIEYTHQAGLES 458
           AFS  G LEGQ AI        S+ QL++C+    G G CD    + +  +Y    G+E+
Sbjct: 136 AFSTTGSLEGQNAIHNKVKTPLSEQQLLDCSAS-YGNGDCDDGGLMTEAFDYIIDNGIEA 194

Query: 459 EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIH 518
           E  YPY     E   C YD  K  +            + +KK +   GP+SVG++S  +H
Sbjct: 195 ESSYPYVEQMTE---CQYDAKKTIVQIKGYKKLLADEDELKKAVGTVGPISVGMSSENLH 251

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIER-GN 577
            Y G  +   D+ C  + + HAVL+VGYG+ +   +W  +NSWG    ++G+F+IER  N
Sbjct: 252 MYGGGVL---DDQCY-FGMDHAVLVVGYGEANGKKFWKVKNSWGTTWGEDGYFRIERDAN 307

Query: 578 NACGIEQIAGYATI 591
           N C I  +  Y  +
Sbjct: 308 NLCDIASMCSYPIL 321



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 150/315 (47%), Gaps = 36/315 (11%)

Query: 660 AFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER----------YGTSEFSDRSPEEIL 707
           AF    G+ Y +  E + RF  F+ +    +KH               ++F+D + +E  
Sbjct: 25  AFKQTHGKTYKSLLEERTRFGIFQNNLRTIEKHNAEYEEGKVTYYMAVTQFADMTRDEFR 84

Query: 708 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 767
            K G + + R           +   L    +D  +P+  DW +K    PA +Q  C SCW
Sbjct: 85  KKLGLQNNRRP---------NLNATLRVFPEDLELPEQIDWTEKGAVLPAKNQGNCRSCW 135

Query: 768 AFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG--C-DGCFFEPSIEYTHQAGLESE 824
           AFS  G LEGQ AI        S+ QL++C+       C DG     + +Y    G+E+E
Sbjct: 136 AFSTTGSLEGQNAIHNKVKTPLSEQQLLDCSASYGNGDCDDGGLMTEAFDYIIDNGIEAE 195

Query: 825 KDYPYKNANGEKFKCAYD--KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 882
             YPY     E   C YD  K+ V++   K  L     + +KK +   GP+SV ++S+ +
Sbjct: 196 SSYPYVEQMTE---CQYDAKKTIVQIKGYKKLLA--DEDELKKAVGTVGPISVGMSSENL 250

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-G 941
           H Y G  +   D+ C  + + HAVL+VGYG+ +   +W V+NSWG    ++G+F+IER  
Sbjct: 251 HMYGGGVL---DDQCY-FGMDHAVLVVGYGEANGKKFWKVKNSWGTTWGEDGYFRIERDA 306

Query: 942 NNACGIEQIAGYATI 956
           NN C I  +  Y  +
Sbjct: 307 NNLCDIASMCSYPIL 321



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 120/225 (53%), Gaps = 15/225 (6%)

Query: 7   KDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVEC 66
           +D  +P+  DW +K    PA +Q +C SCWAFS  G LEGQ AI        S+ QL++C
Sbjct: 106 EDLELPEQIDWTEKGAVLPAKNQGNCRSCWAFSTTGSLEGQNAIHNKVKTPLSEQQLLDC 165

Query: 67  AKQCSG--C-DGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD--KSKVKLFTGK 121
           +       C DG     + +Y    G+E+E  YPY     E   C YD  K+ V++   K
Sbjct: 166 SASYGNGDCDDGGLMTEAFDYIIDNGIEAESSYPYVEQMTE---CQYDAKKTIVQIKGYK 222

Query: 122 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 181
             L     + +KK +   GP+SV ++S+ +H Y G  +   D+ C  + + HAVL+VGYG
Sbjct: 223 KLLA--DEDELKKAVGTVGPISVGMSSENLHMYGGGVL---DDQCY-FGMDHAVLVVGYG 276

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 225
           + +   +W V+NSWG    ++G+F+IER  NN C I  +  Y  +
Sbjct: 277 EANGKKFWKVKNSWGTTWGEDGYFRIERDANNLCDIASMCSYPIL 321



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 962  DETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAG 1020
            D+ C  + + HAVL+VGYG+ +   +W V+NSWG    ++G+F+IER  NN C I  +  
Sbjct: 259  DDQCY-FGMDHAVLVVGYGEANGKKFWKVKNSWGTTWGEDGYFRIERDANNLCDIASMCS 317

Query: 1021 YATI 1024
            Y  +
Sbjct: 318  YPIL 321


>gi|341888719|gb|EGT44654.1| hypothetical protein CAEBREN_19265 [Caenorhabditis brenneri]
          Length = 396

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 155/317 (48%), Gaps = 26/317 (8%)

Query: 654 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEE 705
           + + FK F  K GR++ + EE K RFE F+++     E        +YG + FSD++  E
Sbjct: 84  LQQQFKDFNKKFGREHKSLEEYKMRFEVFQKNLRDIEELNLKNPSVQYGINRFSDKTESE 143

Query: 706 I---LCKTGFKWSERTYE--RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 760
           +   L    F  S  +    + ++       ++  V++    PD  DWR         DQ
Sbjct: 144 LKNLLMDKKFMDSSLSNSSLKTLSSYRNPRNIIKNVQR----PDYIDWRNVGKVMSVKDQ 199

Query: 761 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG 820
             CGSCWAF+    +E QYAI+ G L   S+ +LV+C     GC G F   ++E+    G
Sbjct: 200 GQCGSCWAFATVAAVESQYAIRKGTLWSLSEQELVDCDGASYGCSGGFLTSALEFILGNG 259

Query: 821 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS- 879
           LE+E DYPY     +  +C  +  K +++  + +      + + + +   GP+S  + + 
Sbjct: 260 LETEDDYPYTATKHD--QCWINGDKTRVWIDEGYQLTMNEDDIAEWVANVGPVSFAMRAP 317

Query: 880 -DLIHDYNGTPIRKNDETCSPYDLGHAVL-LVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
              I  +NG     ++  C    +G+ ++ ++GYG++    YW+V+NSWG    ++G+ +
Sbjct: 318 YSFIAYHNGI-YSPSEYQCKHEAMGYVMMAIIGYGQEGGQNYWIVKNSWGDSWGNQGYMR 376

Query: 938 IERGNNACGIEQIAGYA 954
           + RG N C   ++A Y 
Sbjct: 377 LARGVNTC---EMANYV 390



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 154/318 (48%), Gaps = 27/318 (8%)

Query: 288 ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEE 339
           + + FK F  K GR++ + EE K RFE F+++     E        +YG + FSD++  E
Sbjct: 84  LQQQFKDFNKKFGREHKSLEEYKMRFEVFQKNLRDIEELNLKNPSVQYGINRFSDKTESE 143

Query: 340 I---LCKTGFKWSERTYE--RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 394
           +   L    F  S  +    + ++       ++  V++    PD  DWR         DQ
Sbjct: 144 LKNLLMDKKFMDSSLSNSSLKTLSSYRNPRNIIKNVQR----PDYIDWRNVGKVMSVKDQ 199

Query: 395 AACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQA 454
             CGSCWAF+    +E QYAI+ G L   S+ +LV+C     GC G   L   +E+    
Sbjct: 200 GQCGSCWAFATVAAVESQYAIRKGTLWSLSEQELVDCDGASYGCSG-GFLTSALEFILGN 258

Query: 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNS 514
           GLE+E DYPY     +  +C  +  K +++  + +      + + + +   GP+S  + +
Sbjct: 259 GLETEDDYPYTATKHD--QCWINGDKTRVWIDEGYQLTMNEDDIAEWVANVGPVSFAMRA 316

Query: 515 --HLIHFYNGTPIRKNDETCSPYDLGHAVL-LVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
               I ++NG     ++  C    +G+ ++ ++GYG++    YW+ +NSWG    ++G+ 
Sbjct: 317 PYSFIAYHNGI-YSPSEYQCKHEAMGYVMMAIIGYGQEGGQNYWIVKNSWGDSWGNQGYM 375

Query: 572 KIERGNNACGIEQIAGYA 589
           ++ RG N C   ++A Y 
Sbjct: 376 RLARGVNTC---EMANYV 390



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 9/222 (4%)

Query: 5   VEKDGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLV 64
           + K+   PD  DWR         DQ  CGSCWAF+    +E QYAI+ G L   S+ +LV
Sbjct: 175 IIKNVQRPDYIDWRNVGKVMSVKDQGQCGSCWAFATVAAVESQYAIRKGTLWSLSEQELV 234

Query: 65  ECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 124
           +C     GC G F   ++E+    GLE+E DYPY     +  +C  +  K +++  + + 
Sbjct: 235 DCDGASYGCSGGFLTSALEFILGNGLETEDDYPYTATKHD--QCWINGDKTRVWIDEGYQ 292

Query: 125 HFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVL-LVGYG 181
                + + + +   GP+S  + +    I  +NG     ++  C    +G+ ++ ++GYG
Sbjct: 293 LTMNEDDIAEWVANVGPVSFAMRAPYSFIAYHNGI-YSPSEYQCKHEAMGYVMMAIIGYG 351

Query: 182 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 223
           ++    YW+V+NSWG    ++G+ ++ RG N C   ++A Y 
Sbjct: 352 QEGGQNYWIVKNSWGDSWGNQGYMRLARGVNTC---EMANYV 390



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 4/59 (6%)

Query: 965  CSPYDLGHAVL-LVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 1022
            C    +G+ ++ ++GYG++    YW+V+NSWG    ++G+ ++ RG N C   ++A Y 
Sbjct: 335  CKHEAMGYVMMAIIGYGQEGGQNYWIVKNSWGDSWGNQGYMRLARGVNTC---EMANYV 390


>gi|391346471|ref|XP_003747496.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 333

 Score =  137 bits (344), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 100/317 (31%), Positives = 147/317 (46%), Gaps = 30/317 (9%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHK-KHER------YGTSEFSDRSPEE 339
           + +F    G++YA+      R E F       + H  + ER       G +  SD +  E
Sbjct: 24  WSSFKASHGKEYASPAAEAARLEAFNSKLQQIEAHNARFERGEVSYFLGLNALSDLTDAE 83

Query: 340 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 399
           I      K      E I   R  +   + EV      P++ DWR   VT    +QA+CGS
Sbjct: 84  I---RATKLGAVVDEEI---RAGLNASISEVTMPN-APESVDWRGTAVTS-VKNQASCGS 135

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA------KQCSGCGGCDGLEQPIEYTHQ 453
           C+ FS AG +E      + K  + S+ QLV+C           GCGG D     I++  +
Sbjct: 136 CYTFSAAGAIESTLLKNSRKNYDLSEQQLVDCTLNRYIHNMNFGCGGGDP-ATTIQHALR 194

Query: 454 AGLESEKDYPYRNGNGEKF-KCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVG 511
            G+  E +YPYR+GN +   +C+     V L   +      G E  +   +  +GP++V 
Sbjct: 195 HGISQEHEYPYRSGNTQTHGRCSSTSGSVSLNNLRLMQVKAGDENALANAVATHGPIAVT 254

Query: 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFF 571
           LN     FY+ +    N+ +C P  + HAVLLVGYG  +  PYW+ +NSWG    + GF 
Sbjct: 255 LNGENSDFYSYSGGIYNNRSC-PTQINHAVLLVGYGSSNGQPYWIIKNSWGSTWGENGFM 313

Query: 572 KIERGNNACGIEQIAGY 588
           K+ RG+N CGI   A Y
Sbjct: 314 KLARGSNRCGIVSAASY 330



 Score =  129 bits (324), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 95/316 (30%), Positives = 146/316 (46%), Gaps = 29/316 (9%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHK-KHER------YGTSEFSDRSPEE 705
           + +F    G++YA+      R E F       + H  + ER       G +  SD +  E
Sbjct: 24  WSSFKASHGKEYASPAAEAARLEAFNSKLQQIEAHNARFERGEVSYFLGLNALSDLTDAE 83

Query: 706 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 765
           I      K      E I   R  +   + EV      P++ DWR   VT    +QA+CGS
Sbjct: 84  I---RATKLGAVVDEEI---RAGLNASISEVTMPN-APESVDWRGTAVTS-VKNQASCGS 135

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA------KQCSGCDGCFFEPSIEYTHQA 819
           C+ FS AG +E      + K  + S+ QLV+C           GC G     +I++  + 
Sbjct: 136 CYTFSAAGAIESTLLKNSRKNYDLSEQQLVDCTLNRYIHNMNFGCGGGDPATTIQHALRH 195

Query: 820 GLESEKDYPYKNANGEKF-KCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLL 877
           G+  E +YPY++ N +   +C+     V L   +      G E  +   +  +GP++V L
Sbjct: 196 GISQEHEYPYRSGNTQTHGRCSSTSGSVSLNNLRLMQVKAGDENALANAVATHGPIAVTL 255

Query: 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 937
           N +    Y+ +    N+ +C P  + HAVLLVGYG  +  PYW+++NSWG    + GF K
Sbjct: 256 NGENSDFYSYSGGIYNNRSC-PTQINHAVLLVGYGSSNGQPYWIIKNSWGSTWGENGFMK 314

Query: 938 IERGNNACGIEQIAGY 953
           + RG+N CGI   A Y
Sbjct: 315 LARGSNRCGIVSAASY 330



 Score =  128 bits (322), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 74/219 (33%), Positives = 113/219 (51%), Gaps = 10/219 (4%)

Query: 12  PDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA---- 67
           P++ DWR   VT    +QA CGSC+ FS AG +E      + K  + S+ QLV+C     
Sbjct: 114 PESVDWRGTAVTS-VKNQASCGSCYTFSAAGAIESTLLKNSRKNYDLSEQQLVDCTLNRY 172

Query: 68  --KQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKF-KCAYDKSKVKLFTGKDFL 124
                 GC G     +I++  + G+  E +YPY++ N +   +C+     V L   +   
Sbjct: 173 IHNMNFGCGGGDPATTIQHALRHGISQEHEYPYRSGNTQTHGRCSSTSGSVSLNNLRLMQ 232

Query: 125 HFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 183
              G E  +   +  +GP++V LN +    Y+ +    N+ +C P  + HAVLLVGYG  
Sbjct: 233 VKAGDENALANAVATHGPIAVTLNGENSDFYSYSGGIYNNRSC-PTQINHAVLLVGYGSS 291

Query: 184 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 222
           +  PYW+++NSWG    + GF K+ RG+N CGI   A Y
Sbjct: 292 NGQPYWIIKNSWGSTWGENGFMKLARGSNRCGIVSAASY 330



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 959  VKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 1018
            + N+ +C P  + HAVLLVGYG  +  PYW+++NSWG    + GF K+ RG+N CGI   
Sbjct: 269  IYNNRSC-PTQINHAVLLVGYGSSNGQPYWIIKNSWGSTWGENGFMKLARGSNRCGIVSA 327

Query: 1019 AGY 1021
            A Y
Sbjct: 328  ASY 330


>gi|394331828|gb|AFN27133.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 136/303 (44%), Gaps = 26/303 (8%)

Query: 658 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 709
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 710 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 766
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 767 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLES 823
           WAFS  G +E Q+A+   +L   S   LV C  + +G        + E+        + +
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSDHHLVSCHDKDNGRPAGLMLQAFEWLLRNMNGTMFT 210

Query: 824 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLI 882
           E  YPY +++G   +C+     V       ++    SET M   L K GP+S+ L++   
Sbjct: 211 EDSYPYVSSSGYVPECSNSSQLVPGARIDGYVTIESSETVMAAWLAKNGPISIALDASSF 270

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 942
             Y    +     +C+   L H VLLVGY +   +PYW+++NSWG    + G+ ++  G 
Sbjct: 271 MSYQSGVV----TSCAGMPLNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMGV 326

Query: 943 NAC 945
           NAC
Sbjct: 327 NAC 329



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 136/304 (44%), Gaps = 27/304 (8%)

Query: 292 FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 343
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 344 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 400
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 401 WAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEY---THQAGLE 457
           WAFS  G +E Q+A+   +L   S   LV C  + +G      + Q  E+        + 
Sbjct: 151 WAFSAVGSIESQWALAGHRLTALSDHHLVSCHDKDNG-RPAGLMLQAFEWLLRNMNGTMF 209

Query: 458 SEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSET-MKKILYKYGPLSVGLNSHL 516
           +E  YPY + +G   +C+     V       ++    SET M   L K GP+S+ L++  
Sbjct: 210 TEDSYPYVSSSGYVPECSNSSQLVPGARIDGYVTIESSETVMAAWLAKNGPISIALDASS 269

Query: 517 IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERG 576
              Y    +     +C+   L H VLLVGY +  ++PYW+ +NSWG    + G+ ++  G
Sbjct: 270 FMSYQSGVV----TSCAGMPLNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMG 325

Query: 577 NNAC 580
            NAC
Sbjct: 326 VNAC 329



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 103/208 (49%), Gaps = 8/208 (3%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 70
           VPDA DWRKK    P  DQ  CGSCWAFS  G +E Q+A+   +L   S   LV C  + 
Sbjct: 126 VPDAVDWRKKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSDHHLVSCHDKD 185

Query: 71  SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 127
           +G        + E+        + +E  YPY +++G   +C+     V       ++   
Sbjct: 186 NGRPAGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYVTIE 245

Query: 128 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 186
            SET M   L K GP+S+ L++     Y    +     +C+   L H VLLVGY +   +
Sbjct: 246 SSETVMAAWLAKNGPISIALDASSFMSYQSGVV----TSCAGMPLNHGVLLVGYNRTGEV 301

Query: 187 PYWLVRNSWGPIGPDEGFFKIERGNNAC 214
           PYW+++NSWG    + G+ ++  G NAC
Sbjct: 302 PYWVIKNSWGENWGENGYVRVTMGVNAC 329



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 964  TCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNAC 1013
            +C+   L H VLLVGY +  ++PYW+++NSWG    + G+ ++  G NAC
Sbjct: 280  SCAGMPLNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMGVNAC 329


>gi|351701945|gb|EHB04864.1| Cathepsin W [Heterocephalus glaber]
          Length = 373

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 159/332 (47%), Gaps = 42/332 (12%)

Query: 656 ETFKAFIVKRGRQYANDEEIKERFEYFKQD---GHKKHER------YGTSEFSDRSPEEI 706
           E FK F ++  + Y+N  E   R + F  +     +  E       +G + FSD + EE 
Sbjct: 40  EVFKLFQIQFNKSYSNPAEHARRLDIFVHNLAMAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 707 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGS 765
               G  W     +  V  + + EK  +       +P + DWRK  N+  P   Q  C  
Sbjct: 100 GQLYG-NWRAAKKDLRVGRKVRFEKQEL-------IPPSCDWRKAPNIISPVKYQGKCNC 151

Query: 766 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 824
           CWA + AG +E  + I+  + VE S  +L++C +   GC G + ++  I   + +GL SE
Sbjct: 152 CWAIAAAGNIEALWNIRFKQSVEVSVQELLDCGRCGDGCLGGYVWDAFITVLNYSGLASE 211

Query: 825 KDYPYK-NANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 882
           KDY ++  AN  +    + K   K+   +D++    +E TM + +   GP++VL+N  L+
Sbjct: 212 KDYRFRGRANIHRCLAPFYK---KVAWIQDYVMLPRNEHTMARYVATQGPITVLINQMLL 268

Query: 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------------------QDNIPYWLVRN 924
             Y    IR    TC P+ + H VLLVG+GK                  + + PYW+++N
Sbjct: 269 QHYRQGIIRATPSTCDPWLVNHYVLLVGFGKEEEKKGSEKDLSQSNHLPRHSTPYWILKN 328

Query: 925 SWGPIGPDEGFFKIERGNNACGIEQIAGYATI 956
           SWG    ++G+F++ +G+N CGI +    A I
Sbjct: 329 SWGAHWGEQGYFRLHQGSNTCGITRSPLTACI 360



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 153/331 (46%), Gaps = 39/331 (11%)

Query: 290 ETFKAFIVKRGRQYANDEEIKERFEYFKQD---GHKKHER------YGTSEFSDRSPEEI 340
           E FK F ++  + Y+N  E   R + F  +     +  E       +G + FSD + EE 
Sbjct: 40  EVFKLFQIQFNKSYSNPAEHARRLDIFVHNLAMAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 341 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGS 399
               G  W     +  V  + + EK  +       +P + DWRK  N+  P   Q  C  
Sbjct: 100 GQLYG-NWRAAKKDLRVGRKVRFEKQEL-------IPPSCDWRKAPNIISPVKYQGKCNC 151

Query: 400 CWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLEQPIEYTHQAGLESE 459
           CWA + AG +E  + I+  + VE S  +L++C +   GC G    +  I   + +GL SE
Sbjct: 152 CWAIAAAGNIEALWNIRFKQSVEVSVQELLDCGRCGDGCLGGYVWDAFITVLNYSGLASE 211

Query: 460 KDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSE-TMKKILYKYGPLSVGLNSHLIH 518
           KDY +R G     +C     K K+   +D++    +E TM + +   GP++V +N  L+ 
Sbjct: 212 KDYRFR-GRANIHRCLAPFYK-KVAWIQDYVMLPRNEHTMARYVATQGPITVLINQMLLQ 269

Query: 519 FYNGTPIRKNDETCSPYDLGHAVLLVGYGK------------------QDDIPYWLARNS 560
            Y    IR    TC P+ + H VLLVG+GK                  +   PYW+ +NS
Sbjct: 270 HYRQGIIRATPSTCDPWLVNHYVLLVGFGKEEEKKGSEKDLSQSNHLPRHSTPYWILKNS 329

Query: 561 WGPIGPDEGFFKIERGNNACGIEQIAGYATI 591
           WG    ++G+F++ +G+N CGI +    A I
Sbjct: 330 WGAHWGEQGYFRLHQGSNTCGITRSPLTACI 360



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 25/245 (10%)

Query: 3   MEVEKDGPVPDAWDWRKK-NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKS 61
           +  EK   +P + DWRK  N+  P   Q  C  CWA + AG +E  + I+  + VE S  
Sbjct: 119 VRFEKQELIPPSCDWRKAPNIISPVKYQGKCNCCWAIAAAGNIEALWNIRFKQSVEVSVQ 178

Query: 62  QLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYK-NANGEKFKCAYDKSKVKLFT 119
           +L++C +   GC G + ++  I   + +GL SEKDY ++  AN  +    + K   K+  
Sbjct: 179 ELLDCGRCGDGCLGGYVWDAFITVLNYSGLASEKDYRFRGRANIHRCLAPFYK---KVAW 235

Query: 120 GKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 178
            +D++    +E TM + +   GP++VL+N  L+  Y    IR    TC P+ + H VLLV
Sbjct: 236 IQDYVMLPRNEHTMARYVATQGPITVLINQMLLQHYRQGIIRATPSTCDPWLVNHYVLLV 295

Query: 179 GYGK------------------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 220
           G+GK                  + + PYW+++NSWG    ++G+F++ +G+N CGI +  
Sbjct: 296 GFGKEEEKKGSEKDLSQSNHLPRHSTPYWILKNSWGAHWGEQGYFRLHQGSNTCGITRSP 355

Query: 221 GYATI 225
             A I
Sbjct: 356 LTACI 360


>gi|195429415|ref|XP_002062758.1| GK19626 [Drosophila willistoni]
 gi|194158843|gb|EDW73744.1| GK19626 [Drosophila willistoni]
          Length = 341

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 160/326 (49%), Gaps = 26/326 (7%)

Query: 651 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH---KKHERYGTSE---------F 698
           +E + E +  F ++  + YA+  E   R + F ++ H   K ++RY T E         +
Sbjct: 22  SELVREEWNTFKLEHRKNYADSTEETFRMKIFNENKHHIAKHNQRYATGEVSYKLALNKY 81

Query: 699 SDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 757
           +D    E      GF ++   ++++ +  E    +     +   +P A DWR K      
Sbjct: 82  ADMLHHEFRETMNGFNYT--LHKQLRSTDESFTGVTFISPEHVKLPTAVDWRTKGAVTEV 139

Query: 758 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEY 815
            DQ  CGSCWAFS  G +EGQ+  K+G LV  S+  LV+C+ +   +GC+G   + +  Y
Sbjct: 140 KDQGHCGSCWAFSSTGAIEGQHFRKSGTLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRY 199

Query: 816 TH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYGP 872
                G+++EK Y Y+   G    C +DK+ +   T + F     G+E  + + +   GP
Sbjct: 200 VKDNGGIDTEKSYAYE---GIDDSCHFDKNSIGA-TDRGFADIPQGNEKKLAQAVATIGP 255

Query: 873 LSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGP 931
           +SV +++        +    ++  CS  +L H VL+VGYG ++D   YWLV+NSWG    
Sbjct: 256 VSVAIDASQQSFQFYSEGVYDEPNCSAENLDHGVLVVGYGTEKDGSDYWLVKNSWGTTWG 315

Query: 932 DEGFFKIERGN-NACGIEQIAGYATI 956
           D+GF K+ R   N CGI   + Y  +
Sbjct: 316 DKGFIKMSRNKENQCGIASASSYPLV 341



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 27/327 (8%)

Query: 285 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH---KKHERYGTSE---------F 332
           +E + E +  F ++  + YA+  E   R + F ++ H   K ++RY T E         +
Sbjct: 22  SELVREEWNTFKLEHRKNYADSTEETFRMKIFNENKHHIAKHNQRYATGEVSYKLALNKY 81

Query: 333 SDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 391
           +D    E      GF ++   ++++ +  E    +     +   +P A DWR K      
Sbjct: 82  ADMLHHEFRETMNGFNYT--LHKQLRSTDESFTGVTFISPEHVKLPTAVDWRTKGAVTEV 139

Query: 392 GDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDG--LEQPIE 449
            DQ  CGSCWAFS  G +EGQ+  K+G LV  S+  LV+C+ +  G  GC+G  ++    
Sbjct: 140 KDQGHCGSCWAFSSTGAIEGQHFRKSGTLVSLSEQNLVDCSTKY-GNNGCNGGLMDNAFR 198

Query: 450 YTH-QAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYF-NGSE-TMKKILYKYG 506
           Y     G+++EK Y Y    G    C +DK+ +   T + F     G+E  + + +   G
Sbjct: 199 YVKDNGGIDTEKSYAYE---GIDDSCHFDKNSIGA-TDRGFADIPQGNEKKLAQAVATIG 254

Query: 507 PLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLARNSWGPIG 565
           P+SV +++    F   +    ++  CS  +L H VL+VGYG + D   YWL +NSWG   
Sbjct: 255 PVSVAIDASQQSFQFYSEGVYDEPNCSAENLDHGVLVVGYGTEKDGSDYWLVKNSWGTTW 314

Query: 566 PDEGFFKIERGN-NACGIEQIAGYATI 591
            D+GF K+ R   N CGI   + Y  +
Sbjct: 315 GDKGFIKMSRNKENQCGIASASSYPLV 341



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 118/222 (53%), Gaps = 11/222 (4%)

Query: 11  VPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 69
           +P A DWR K       DQ  CGSCWAFS  G +EGQ+  K+G LV  S+  LV+C+ + 
Sbjct: 124 LPTAVDWRTKGAVTEVKDQGHCGSCWAFSSTGAIEGQHFRKSGTLVSLSEQNLVDCSTKY 183

Query: 70  -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF- 126
             +GC+G   + +  Y     G+++EK Y Y+   G    C +DK+ +   T + F    
Sbjct: 184 GNNGCNGGLMDNAFRYVKDNGGIDTEKSYAYE---GIDDSCHFDKNSIGA-TDRGFADIP 239

Query: 127 NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQD 184
            G+E  + + +   GP+SV +++        +    ++  CS  +L H VL+VGYG ++D
Sbjct: 240 QGNEKKLAQAVATIGPVSVAIDASQQSFQFYSEGVYDEPNCSAENLDHGVLVVGYGTEKD 299

Query: 185 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 225
              YWLV+NSWG    D+GF K+ R   N CGI   + Y  +
Sbjct: 300 GSDYWLVKNSWGTTWGDKGFIKMSRNKENQCGIASASSYPLV 341



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 19/119 (15%)

Query: 923  RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV---------------VKNDETCSP 967
            +NS G    D GF  I +GN     + +A    + V               V ++  CS 
Sbjct: 225  KNSIGA--TDRGFADIPQGNEKKLAQAVATIGPVSVAIDASQQSFQFYSEGVYDEPNCSA 282

Query: 968  YDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 1024
             +L H VL+VGYG + D   YWLV+NSWG    D+GF K+ R   N CGI   + Y  +
Sbjct: 283  ENLDHGVLVVGYGTEKDGSDYWLVKNSWGTTWGDKGFIKMSRNKENQCGIASASSYPLV 341


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.138    0.433 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,758,881,004
Number of Sequences: 23463169
Number of extensions: 807349391
Number of successful extensions: 1899274
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5859
Number of HSP's successfully gapped in prelim test: 1189
Number of HSP's that attempted gapping in prelim test: 1831583
Number of HSP's gapped (non-prelim): 31806
length of query: 1026
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 873
effective length of database: 8,769,330,510
effective search space: 7655625535230
effective search space used: 7655625535230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)