Query psy7460
Match_columns 1026
No_of_seqs 777 out of 4715
Neff 7.7
Searched_HMMs 46136
Date Fri Aug 16 18:54:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7460.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7460hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1542|consensus 100.0 2.8E-78 6.1E-83 638.7 23.2 291 287-590 66-370 (372)
2 KOG1542|consensus 100.0 5.1E-73 1.1E-77 598.8 24.1 290 655-955 68-370 (372)
3 PTZ00203 cathepsin L protease; 100.0 1.5E-67 3.2E-72 591.3 29.8 294 286-590 32-339 (348)
4 PTZ00200 cysteine proteinase; 100.0 3.6E-66 7.8E-71 593.7 29.4 323 257-591 88-445 (448)
5 PTZ00203 cathepsin L protease; 100.0 3.3E-65 7.1E-70 572.3 32.7 295 651-954 31-338 (348)
6 PTZ00021 falcipain-2; Provisio 100.0 5.8E-65 1.3E-69 584.2 27.8 303 279-592 156-489 (489)
7 PTZ00200 cysteine proteinase; 100.0 6.3E-64 1.4E-68 575.2 31.8 325 622-956 87-445 (448)
8 PTZ00021 falcipain-2; Provisio 100.0 6.4E-63 1.4E-67 567.3 28.5 294 655-957 166-489 (489)
9 KOG1543|consensus 100.0 1.1E-59 2.3E-64 524.5 24.6 275 296-588 30-320 (325)
10 KOG1543|consensus 100.0 1.4E-57 3E-62 507.5 25.5 276 662-953 30-320 (325)
11 cd02698 Peptidase_C1A_Cathepsi 100.0 6.7E-52 1.5E-56 447.3 22.4 207 376-591 1-238 (239)
12 cd02621 Peptidase_C1A_Cathepsi 100.0 1E-51 2.2E-56 447.9 22.0 210 376-591 1-242 (243)
13 cd02620 Peptidase_C1A_Cathepsi 100.0 7.3E-51 1.6E-55 438.4 20.6 207 377-588 1-235 (236)
14 cd02698 Peptidase_C1A_Cathepsi 100.0 1.6E-50 3.5E-55 436.6 22.9 208 742-956 1-238 (239)
15 cd02621 Peptidase_C1A_Cathepsi 100.0 1.5E-50 3.3E-55 438.6 22.4 210 742-954 1-240 (243)
16 PTZ00049 cathepsin C-like prot 100.0 5.1E-50 1.1E-54 468.2 22.8 217 373-594 378-679 (693)
17 cd02620 Peptidase_C1A_Cathepsi 100.0 1.2E-49 2.6E-54 429.0 21.6 207 743-952 1-234 (236)
18 PTZ00364 dipeptidyl-peptidase 100.0 1.1E-48 2.4E-53 454.4 22.7 216 373-590 202-458 (548)
19 cd02248 Peptidase_C1A Peptidas 100.0 1.9E-48 4.1E-53 413.9 22.4 205 377-589 1-210 (210)
20 PTZ00049 cathepsin C-like prot 100.0 1.6E-48 3.4E-53 455.7 23.2 220 738-960 377-680 (693)
21 cd02248 Peptidase_C1A Peptidas 100.0 5.1E-48 1.1E-52 410.6 22.1 206 743-954 1-210 (210)
22 PTZ00364 dipeptidyl-peptidase 100.0 8.3E-48 1.8E-52 447.1 23.7 218 739-956 202-459 (548)
23 PF00112 Peptidase_C1: Papain 100.0 2.2E-46 4.7E-51 400.3 18.3 208 376-590 1-219 (219)
24 PF00112 Peptidase_C1: Papain 100.0 3.6E-46 7.9E-51 398.6 19.2 209 742-955 1-219 (219)
25 smart00645 Pept_C1 Papain fami 100.0 2.5E-44 5.3E-49 369.2 17.8 165 376-586 1-170 (174)
26 smart00645 Pept_C1 Papain fami 100.0 1.7E-43 3.6E-48 363.1 18.2 165 742-950 1-169 (174)
27 PTZ00462 Serine-repeat antigen 100.0 2.8E-41 6E-46 404.5 21.6 202 387-595 543-785 (1004)
28 PTZ00462 Serine-repeat antigen 100.0 3.4E-40 7.3E-45 395.2 21.8 200 754-958 544-783 (1004)
29 cd02619 Peptidase_C1 C1 Peptid 100.0 3E-39 6.5E-44 346.0 20.0 193 379-577 1-213 (223)
30 cd02619 Peptidase_C1 C1 Peptid 100.0 8E-39 1.7E-43 342.7 20.5 194 745-942 1-213 (223)
31 KOG1544|consensus 100.0 1.8E-37 4E-42 322.0 7.0 216 5-220 203-455 (470)
32 KOG1544|consensus 100.0 6.5E-37 1.4E-41 317.9 8.9 248 329-585 168-454 (470)
33 COG4870 Cysteine protease [Pos 99.9 3.4E-28 7.3E-33 262.0 8.2 237 740-997 97-357 (372)
34 COG4870 Cysteine protease [Pos 99.9 3E-23 6.4E-28 224.0 8.4 204 8-215 96-318 (372)
35 cd00585 Peptidase_C1B Peptidas 99.8 5E-18 1.1E-22 194.7 16.1 185 389-576 55-399 (437)
36 cd00585 Peptidase_C1B Peptidas 99.8 5E-18 1.1E-22 194.7 14.9 186 755-941 55-399 (437)
37 PF03051 Peptidase_C1_2: Pepti 99.3 1.4E-11 3E-16 142.0 14.1 186 24-209 56-399 (438)
38 PF03051 Peptidase_C1_2: Pepti 99.2 5.6E-11 1.2E-15 137.0 12.5 186 755-940 56-399 (438)
39 PF08246 Inhibitor_I29: Cathep 99.1 1.1E-10 2.4E-15 97.1 5.1 49 292-340 1-58 (58)
40 PF08246 Inhibitor_I29: Cathep 99.1 2.5E-10 5.4E-15 95.0 5.9 49 658-706 1-58 (58)
41 smart00848 Inhibitor_I29 Cathe 98.7 8.2E-09 1.8E-13 85.5 3.3 48 292-339 1-57 (57)
42 smart00848 Inhibitor_I29 Cathe 98.7 1.3E-08 2.9E-13 84.3 3.7 48 658-705 1-57 (57)
43 COG3579 PepC Aminopeptidase C 98.2 5.8E-06 1.3E-10 88.9 11.0 76 25-100 59-163 (444)
44 COG3579 PepC Aminopeptidase C 97.7 0.00017 3.7E-09 77.9 10.0 74 867-940 308-401 (444)
45 KOG4128|consensus 95.3 0.016 3.4E-07 63.0 3.9 76 24-99 63-169 (457)
46 PF05543 Peptidase_C47: Stapho 95.2 0.13 2.9E-06 51.8 10.0 128 27-209 17-153 (175)
47 PF13529 Peptidase_C39_2: Pept 94.1 0.2 4.4E-06 48.8 8.5 58 127-195 87-144 (144)
48 PF05543 Peptidase_C47: Stapho 93.5 0.52 1.1E-05 47.6 9.8 118 393-562 18-145 (175)
49 PF13529 Peptidase_C39_2: Pept 91.9 1.3 2.9E-05 43.0 10.4 57 859-926 88-144 (144)
50 PF09778 Guanylate_cyc_2: Guan 72.8 10 0.00022 40.1 6.8 64 128-193 112-180 (212)
51 PF09778 Guanylate_cyc_2: Guan 64.6 23 0.00049 37.5 7.4 57 494-550 112-173 (212)
52 PF14399 Transpep_BrtH: NlpC/p 57.2 16 0.00034 41.2 5.3 55 128-191 77-131 (317)
53 cd00044 CysPc Calpains, domain 52.5 33 0.00071 38.9 6.9 29 169-197 233-263 (315)
54 PF14399 Transpep_BrtH: NlpC/p 50.8 36 0.00079 38.3 6.9 56 495-559 78-133 (317)
55 COG4990 Uncharacterized protei 49.6 28 0.0006 35.6 4.9 48 127-196 121-168 (195)
56 KOG4128|consensus 45.7 18 0.00039 40.2 3.1 76 755-830 63-169 (457)
57 PF12385 Peptidase_C70: Papain 40.9 2.6E+02 0.0056 28.3 9.9 110 754-913 24-134 (166)
58 PF12385 Peptidase_C70: Papain 37.8 3.1E+02 0.0068 27.7 10.0 39 494-549 97-135 (166)
59 PF08127 Propeptide_C1: Peptid 32.8 24 0.00051 27.2 1.1 32 316-348 5-38 (41)
60 cd02549 Peptidase_C39A A sub-f 32.5 92 0.002 30.0 5.7 45 132-195 70-114 (141)
61 cd00044 CysPc Calpains, domain 28.3 1.5E+02 0.0033 33.5 7.2 27 537-563 235-263 (315)
62 COG4990 Uncharacterized protei 27.1 1.2E+02 0.0026 31.2 5.2 48 858-927 121-168 (195)
No 1
>KOG1542|consensus
Probab=100.00 E-value=2.8e-78 Score=638.65 Aligned_cols=291 Identities=41% Similarity=0.796 Sum_probs=256.9
Q ss_pred HHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhccc---------CCCcccccccCCCCCHHHHh-hhcCCCCCccchhhh
Q psy7460 287 NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH---------KKHERYGTSEFSDRSPEEIL-CKTGFKWSERTYERI 356 (1026)
Q Consensus 287 ~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~F~~n~~---------~~~~~~g~n~fsD~t~eEf~-~~~~~~~~~~~~~~~ 356 (1026)
...++|..|+.+|+|+|.+.+|..+|+.||+.|+. .+++.||+|+|||||+|||+ .+++.+........
T Consensus 66 ~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~~- 144 (372)
T KOG1542|consen 66 GLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKLPG- 144 (372)
T ss_pred chHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccccccccCcc-
Confidence 34899999999999999999999999999999952 34889999999999999999 66665542111100
Q ss_pred hhhhHHHHHhhhcccCCCCCCCceeccCCCCCCCCCCCCCCcchHHHHhHHHHHHHHHHHcCCCccCCHHHHHhhhcCCC
Q psy7460 357 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 436 (1026)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~lP~~~DwR~~~~vt~vk~Qg~CgSCwAfa~~~~~e~~~~i~~~~~~~lS~q~lvdC~~~~~ 436 (1026)
+... .+......||++||||++|+||||||||.||||||||+|+++|++++|++|++++|||||||||+..++
T Consensus 145 --~~~~-----~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~d~ 217 (372)
T KOG1542|consen 145 --DAAE-----APIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSCDN 217 (372)
T ss_pred --cccc-----CcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCcCC
Confidence 0000 011345789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCc-hHHHH-HHhCCcCCCCCCcccCCCCCccccccCCCCceeeecceeEecC-CHHHHHHHHHcCCCEEEEEe
Q psy7460 437 GCGGCDGLE-QPIEY-THQAGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN-GSETMKKILYKYGPLSVGLN 513 (1026)
Q Consensus 437 gC~G~~G~~-~a~~~-~~~~Gi~~e~~ypY~~~~~~~~~C~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gPv~v~i~ 513 (1026)
||+| |++ +||+| ++.+||..|.+|||+++++. .|.+++.+.++ .+.+|..++ +|++|.+.|.++|||+|+|+
T Consensus 218 gC~G--Gl~~nA~~~~~~~gGL~~E~dYPY~g~~~~--~C~~~~~~~~v-~I~~f~~l~~nE~~ia~wLv~~GPi~vgiN 292 (372)
T KOG1542|consen 218 GCNG--GLMDNAFKYIKKAGGLEKEKDYPYTGKKGN--QCHFDKSKIVV-SIKDFSMLSNNEDQIAAWLVTFGPLSVGIN 292 (372)
T ss_pred cCCC--CChhHHHHHHHHhCCccccccCCccccCCC--ccccchhhceE-EEeccEecCCCHHHHHHHHHhcCCeEEEEc
Confidence 9999 999 99999 68899999999999998874 79999887776 556666655 99999999999999999999
Q ss_pred cCccccccCCceeCCCCCCCCCCCCeEEEEEEeeecC-CccEEEEEcCCCCCCCCCcEEEEEecCCcccccceeeeeE
Q psy7460 514 SHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-DIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 590 (1026)
Q Consensus 514 ~~~~~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyG~~~-g~~YWivkNSWG~~WGe~Gy~ri~r~~n~cgi~~~~~~~~ 590 (1026)
+..+|+|++||+.|....|++..+||||||||||.+. .+||||||||||++|||+||+|+.||.|.|||+++++-+.
T Consensus 293 a~~mQ~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~N~CGi~~mvss~~ 370 (372)
T KOG1542|consen 293 AKPMQFYRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGSNACGIADMVSSAA 370 (372)
T ss_pred hHHHHHhcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEeccccccccccchhhhh
Confidence 9899999999998777799998899999999999988 8999999999999999999999999999999999987654
No 2
>KOG1542|consensus
Probab=100.00 E-value=5.1e-73 Score=598.76 Aligned_cols=290 Identities=40% Similarity=0.767 Sum_probs=254.5
Q ss_pred HHHHHHHHHHhCCcCCCHHHHHHHHHHHHHhh--------h-CCCcccccCcCCCCCHHHHH-hhcCCCCCchhhhhhhh
Q psy7460 655 LETFKAFIVKRGRQYANDEEIKERFEYFKQDG--------H-KKHERYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVA 724 (1026)
Q Consensus 655 ~~~f~~f~~~~~k~Y~~~~E~~~R~~iF~~N~--------~-~~~~~~giN~faD~t~eEf~-~~~g~~~~~~~~~~~~~ 724 (1026)
...|..|+.+|+|+|.+.+|+.+|+.||++|+ . .+++.||+|+|||||+|||+ ++++.+....... .
T Consensus 68 ~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~---~ 144 (372)
T KOG1542|consen 68 EDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKLP---G 144 (372)
T ss_pred HHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccccccccCc---c
Confidence 67899999999999999999999999999996 1 23778999999999999999 5665544210000 0
Q ss_pred hhhhhhhhhhcccCCCCCCCceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHhcCCceecCHHHHHhhcCCCCCC
Q psy7460 725 DREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 804 (1026)
Q Consensus 725 ~~~~~~~~~~~~~~~~~lP~s~DwR~~g~v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~~~~~lS~Q~lvdC~~~~~gC 804 (1026)
+. ...+......||++||||++|+||||||||.||||||||+|+++|++++|++|++++||||+||||+..+.||
T Consensus 145 ~~-----~~~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~d~gC 219 (372)
T KOG1542|consen 145 DA-----AEAPIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSCDNGC 219 (372)
T ss_pred cc-----ccCcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCcCCcC
Confidence 00 0112245678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHH-HHHcCCCCCCcccCcCCCCCcccccCCCCcceEEecceeeecC-hHHHHHHHHHhcCCEEEEEeCCCC
Q psy7460 805 DGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSETMKKILYKYGPLSVLLNSDLI 882 (1026)
Q Consensus 805 ~GG~~~~a~~y-~~~~Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~~~~~~~~~~~-~~~~ik~~l~~~GPV~v~i~~~~f 882 (1026)
+||.+..||+| ++.+|+..|.+|||+++++. .|..++....+ .+.+|..++ +|++|.+.|.++|||+|+|++..+
T Consensus 220 ~GGl~~nA~~~~~~~gGL~~E~dYPY~g~~~~--~C~~~~~~~~v-~I~~f~~l~~nE~~ia~wLv~~GPi~vgiNa~~m 296 (372)
T KOG1542|consen 220 NGGLMDNAFKYIKKAGGLEKEKDYPYTGKKGN--QCHFDKSKIVV-SIKDFSMLSNNEDQIAAWLVTFGPLSVGINAKPM 296 (372)
T ss_pred CCCChhHHHHHHHHhCCccccccCCccccCCC--ccccchhhceE-EEeccEecCCCHHHHHHHHHhcCCeEEEEchHHH
Confidence 99999999999 57899999999999998874 79988866655 777887654 899999999999999999999999
Q ss_pred cccCCcceeCCCCCCCCCCCCeEEEEEEeeecC-CccEEEEEcCCCCCCCCCcEEEEEecCCccccCCcceEEE
Q psy7460 883 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 955 (1026)
Q Consensus 883 ~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyg~~~-g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cGi~~~~~~~~ 955 (1026)
|+|.+||+.+....|+...+||+|||||||... .++|||||||||+.|||+||+|+.||.|.|||+++++-+.
T Consensus 297 Q~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~N~CGi~~mvss~~ 370 (372)
T KOG1542|consen 297 QFYRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGSNACGIADMVSSAA 370 (372)
T ss_pred HHhcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEeccccccccccchhhhh
Confidence 999999999866689988899999999999988 8999999999999999999999999999999998876543
No 3
>PTZ00203 cathepsin L protease; Provisional
Probab=100.00 E-value=1.5e-67 Score=591.29 Aligned_cols=294 Identities=31% Similarity=0.551 Sum_probs=237.9
Q ss_pred hHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhccc--------CCCcccccccCCCCCHHHHh-hhcCCCCCccchhhh
Q psy7460 286 ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--------KKHERYGTSEFSDRSPEEIL-CKTGFKWSERTYERI 356 (1026)
Q Consensus 286 ~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~F~~n~~--------~~~~~~g~n~fsD~t~eEf~-~~~~~~~~~~~~~~~ 356 (1026)
..+..+|++|+++|+|.|.+.+|+.+|+.||++|++ ..++++|+|+|+|||+|||+ .+++...........
T Consensus 32 ~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~~~lg~N~FaDlT~eEf~~~~l~~~~~~~~~~~~ 111 (348)
T PTZ00203 32 TPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAARYLNGAAYFAAAKQH 111 (348)
T ss_pred cHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccccccCCHHHHHHHhcCCCccccccccc
Confidence 356678999999999999998899999999999953 23678899999999999998 555321100000000
Q ss_pred hhhhHHHHHhhhcccCCCCCCCceeccCCCCCCCCCCCCCCcchHHHHhHHHHHHHHHHHcCCCccCCHHHHHhhhcCCC
Q psy7460 357 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 436 (1026)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~lP~~~DwR~~~~vt~vk~Qg~CgSCwAfa~~~~~e~~~~i~~~~~~~lS~q~lvdC~~~~~ 436 (1026)
.. ... ........+||++||||++|+|+||||||.||||||||++++||++++|++++++.||+||||||+..+.
T Consensus 112 -~~-~~~---~~~~~~~~~lP~~~DWR~~g~VtpVkdQg~CGSCWAfa~~~aiEs~~~i~~~~~~~LSeQqLvdC~~~~~ 186 (348)
T PTZ00203 112 -AG-QHY---RKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDN 186 (348)
T ss_pred -cc-ccc---cccccccccCCCCCcCCcCCCCCCccccCCCccHHHHhhHHHHHHHHHHhcCCCccCCHHHHHhccCCCC
Confidence 00 000 0000122468999999999999999999999999999999999999999999999999999999998778
Q ss_pred CCCCCCCCc-hHHHHHHh---CCcCCCCCCcccCCCCCccccccCCCCceeeecceeEecC-CHHHHHHHHHcCCCEEEE
Q psy7460 437 GCGGCDGLE-QPIEYTHQ---AGLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN-GSETMKKILYKYGPLSVG 511 (1026)
Q Consensus 437 gC~G~~G~~-~a~~~~~~---~Gi~~e~~ypY~~~~~~~~~C~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gPv~v~ 511 (1026)
||+| |.+ .||+|+.+ +||++|++|||.+.++....|...........+..|..+. +++.|+++|+++|||+|+
T Consensus 187 GC~G--G~~~~a~~yi~~~~~ggi~~e~~YPY~~~~~~~~~C~~~~~~~~~~~i~~~~~i~~~e~~~~~~l~~~GPv~v~ 264 (348)
T PTZ00203 187 GCGG--GLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIA 264 (348)
T ss_pred CCCC--CCHHHHHHHHHHhcCCCCCccccCCCccCCCCCCcCCCCcccccceEecceeecCcCHHHHHHHHHhCCCEEEE
Confidence 9999 999 99999854 4699999999998776434686433221222456666554 788999999999999999
Q ss_pred EecCccccccCCceeCCCCCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCcEEEEEecCCcccccceeeeeE
Q psy7460 512 LNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 590 (1026)
Q Consensus 512 i~~~~~~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~Gy~ri~r~~n~cgi~~~~~~~~ 590 (1026)
|++..|++|++|||. .|....+||||+|||||+++|++|||||||||++|||+|||||+||.|.|||++.+..+.
T Consensus 265 i~a~~f~~Y~~GIy~----~c~~~~~nHaVliVGYG~~~g~~YWiikNSWG~~WGe~GY~ri~rg~n~Cgi~~~~~~~~ 339 (348)
T PTZ00203 265 VDASSFMSYHSGVLT----SCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNACLLTGYPVSVH 339 (348)
T ss_pred EEhhhhcCccCceee----ccCCCCCCeEEEEEEEecCCCceEEEEEcCCCCCcCcCceEEEEcCCCcccccceEEEEe
Confidence 999889999999993 387666899999999999999999999999999999999999999999999996665543
No 4
>PTZ00200 cysteine proteinase; Provisional
Probab=100.00 E-value=3.6e-66 Score=593.67 Aligned_cols=323 Identities=28% Similarity=0.505 Sum_probs=263.5
Q ss_pred cCCCchhhhhhhhhcchhhhccCCccCCh---hHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhccc-------CCCcc
Q psy7460 257 LPSLTDRITDQVVARVDTLAIEGSLTFDN---ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-------KKHER 326 (1026)
Q Consensus 257 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~F~~n~~-------~~~~~ 326 (1026)
+|.++...+...++|+.+|+.++.+..+. .++..+|++|+++|+|.|.+.+|+.+|+.||++|++ ..+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~e~~~~F~~f~~ky~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~~y~ 167 (448)
T PTZ00200 88 FPRLDKSKRDSYVDELTRLFKDGYISDDPKLEFEVYLEFEEFNKKYNRKHATHAERLNRFLTFRNNYLEVKSHKGDEPYS 167 (448)
T ss_pred CCCcChhHHHHHHHHHHHHhhCCCcCCCccchHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHhcCcCCeE
Confidence 68888888999999999999999887653 367789999999999999999999999999999963 23578
Q ss_pred cccccCCCCCHHHHh-hhcCCCCCccch-----hhhh----hhhHHHHH---hh---hcc-cCCCCCCCceeccCCCCCC
Q psy7460 327 YGTSEFSDRSPEEIL-CKTGFKWSERTY-----ERIV----ADREKVEK---ML---MEV-EKDGPVPDAWDWRKKNVTG 389 (1026)
Q Consensus 327 ~g~n~fsD~t~eEf~-~~~~~~~~~~~~-----~~~~----~~~~~~~~---~~---~~~-~~~~~lP~~~DwR~~~~vt 389 (1026)
+|+|+|||||+|||. .+++.+.+.... .... ........ .. ... .....+|++||||++|.|+
T Consensus 168 lgiN~FsDlT~eEF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~DWR~~g~vt 247 (448)
T PTZ00200 168 KEINKFSDLTEEEFRKLFPVIKVPPKSNSTSHNNDFKARHVSNPTYLKNLKKAKNTDEDVKDPSKITGEGLDWRRADAVT 247 (448)
T ss_pred EeccccccCCHHHHHHHhccCCCcccccccccccccccccccccccccccccccccccccccccccCCCCccCCCCCCCC
Confidence 899999999999998 566554321100 0000 00000000 00 000 0012369999999999999
Q ss_pred CCCCCC-CCcchHHHHhHHHHHHHHHHHcCCCccCCHHHHHhhhcCCCCCCCCCCCc-hHHHHHHhCCcCCCCCCcccCC
Q psy7460 390 PAGDQA-ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCGGCDGLE-QPIEYTHQAGLESEKDYPYRNG 467 (1026)
Q Consensus 390 ~vk~Qg-~CgSCwAfa~~~~~e~~~~i~~~~~~~lS~q~lvdC~~~~~gC~G~~G~~-~a~~~~~~~Gi~~e~~ypY~~~ 467 (1026)
|||||| .||||||||+++++|++++|+++.++.||+|||+||+..+.||.| |.+ .||+|++++||++|++|||++.
T Consensus 248 pVkdQG~~CGSCWAFat~~aiEs~~~i~~~~~~~LSeQqLvDC~~~~~GC~G--G~~~~A~~yi~~~Gi~~e~~YPY~~~ 325 (448)
T PTZ00200 248 KVKDQGLNCGSCWAFSSVGSVESLYKIYRDKSVDLSEQELVNCDTKSQGCSG--GYPDTALEYVKNKGLSSSSDVPYLAK 325 (448)
T ss_pred CcccCCCccchHHHHhHHHHHHHHHHHhcCCCeecCHHHHhhccCccCCCCC--CcHHHHHHHHhhcCccccccCCCCCC
Confidence 999999 999999999999999999999999999999999999987889999 999 9999999999999999999998
Q ss_pred CCCccccccCCCCceeeecceeEecCCHHHHHHHHHcCCCEEEEEecC-ccccccCCceeCCCCCCCCCCCCeEEEEEEe
Q psy7460 468 NGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH-LIHFYNGTPIRKNDETCSPYDLGHAVLLVGY 546 (1026)
Q Consensus 468 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gPv~v~i~~~-~~~~y~~Gi~~~~~~~c~~~~~~HaV~iVGy 546 (1026)
++ .|...... .+.+..|..+.+.+.|++++ ..|||+|+|++. .|++|++||| ++.|+. .+||||+||||
T Consensus 326 ~~---~C~~~~~~--~~~i~~y~~~~~~~~l~~~l-~~GPV~v~i~~~~~f~~Yk~GIy---~~~C~~-~~nHaV~lVGy 395 (448)
T PTZ00200 326 DG---KCVVSSTK--KVYIDSYLVAKGKDVLNKSL-VISPTVVYIAVSRELLKYKSGVY---NGECGK-SLNHAVLLVGE 395 (448)
T ss_pred CC---CCcCCCCC--eeEecceEecCHHHHHHHHH-hcCCEEEEeecccccccCCCCcc---ccccCC-CCcEEEEEEEe
Confidence 87 88765432 23467777777666666666 579999999995 7999999999 456875 48999999999
Q ss_pred ee--cCCccEEEEEcCCCCCCCCCcEEEEEec---CCcccccceeeeeEE
Q psy7460 547 GK--QDDIPYWLARNSWGPIGPDEGFFKIERG---NNACGIEQIAGYATI 591 (1026)
Q Consensus 547 G~--~~g~~YWivkNSWG~~WGe~Gy~ri~r~---~n~cgi~~~~~~~~~ 591 (1026)
|. ++|++|||||||||++|||+|||||+|+ .|.|||++.+.||++
T Consensus 396 G~d~~~g~~YWIIkNSWG~~WGe~GY~ri~r~~~g~n~CGI~~~~~~P~~ 445 (448)
T PTZ00200 396 GYDEKTKKRYWIIKNSWGTDWGENGYMRLERTNEGTDKCGILTVGLTPVF 445 (448)
T ss_pred cccCCCCCceEEEEcCCCCCcccCeeEEEEeCCCCCCcCCccccceeeEE
Confidence 95 4689999999999999999999999996 589999999999986
No 5
>PTZ00203 cathepsin L protease; Provisional
Probab=100.00 E-value=3.3e-65 Score=572.28 Aligned_cols=295 Identities=29% Similarity=0.534 Sum_probs=238.9
Q ss_pred hhhHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHhh-----hC---CCcccccCcCCCCCHHHHH-hhcCCCCCchhhhh
Q psy7460 651 NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDG-----HK---KHERYGTSEFSDRSPEEIL-CKTGFKWSERTYER 721 (1026)
Q Consensus 651 ~~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~iF~~N~-----~~---~~~~~giN~faD~t~eEf~-~~~g~~~~~~~~~~ 721 (1026)
...+...|++||++|+|.|.+.+|+.+|+.||++|+ ++ .+++||+|+|||||+|||. .+++.........
T Consensus 31 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~~~lg~N~FaDlT~eEf~~~~l~~~~~~~~~~- 109 (348)
T PTZ00203 31 GTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAARYLNGAAYFAAAK- 109 (348)
T ss_pred ccHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccccccCCHHHHHHHhcCCCccccccc-
Confidence 445667899999999999999889999999999996 22 3568899999999999998 4543211000000
Q ss_pred hhhhhhhhhhhhhcccCCCCCCCceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHhcCCceecCHHHHHhhcCCC
Q psy7460 722 IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801 (1026)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~~~~~lS~Q~lvdC~~~~ 801 (1026)
.... ...........+||++||||++|+|+||||||.||||||||++++||++++|++++++.||+|+|+||+..+
T Consensus 110 ---~~~~-~~~~~~~~~~~~lP~~~DWR~~g~VtpVkdQg~CGSCWAfa~~~aiEs~~~i~~~~~~~LSeQqLvdC~~~~ 185 (348)
T PTZ00203 110 ---QHAG-QHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVD 185 (348)
T ss_pred ---cccc-ccccccccccccCCCCCcCCcCCCCCCccccCCCccHHHHhhHHHHHHHHHHhcCCCccCCHHHHHhccCCC
Confidence 0000 000000112236899999999999999999999999999999999999999999999999999999999878
Q ss_pred CCCCCCCchHHHHHHHH---cCCCCCCcccCcCCCCCcccccCCCCcceEEecceeeecC-hHHHHHHHHHhcCCEEEEE
Q psy7460 802 SGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSETMKKILYKYGPLSVLL 877 (1026)
Q Consensus 802 ~gC~GG~~~~a~~y~~~---~Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~~~~~~~~~~~-~~~~ik~~l~~~GPV~v~i 877 (1026)
.||+||.+..||+|+.+ .|+++|++|||.+.++....|.........+++.+|..+. +++.|+++|+++|||+|+|
T Consensus 186 ~GC~GG~~~~a~~yi~~~~~ggi~~e~~YPY~~~~~~~~~C~~~~~~~~~~~i~~~~~i~~~e~~~~~~l~~~GPv~v~i 265 (348)
T PTZ00203 186 NGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265 (348)
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCccccCCCccCCCCCCcCCCCcccccceEecceeecCcCHHHHHHHHHhCCCEEEEE
Confidence 89999999999999864 3689999999998876444686433222223566776654 6889999999999999999
Q ss_pred eCCCCcccCCcceeCCCCCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCcEEEEEecCCccccCCcceEE
Q psy7460 878 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 954 (1026)
Q Consensus 878 ~~~~f~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cGi~~~~~~~ 954 (1026)
+++.|++|++|||.. |....+||+|+|||||+++|++|||||||||++|||+|||||+|+.|.|||++.+...
T Consensus 266 ~a~~f~~Y~~GIy~~----c~~~~~nHaVliVGYG~~~g~~YWiikNSWG~~WGe~GY~ri~rg~n~Cgi~~~~~~~ 338 (348)
T PTZ00203 266 DASSFMSYHSGVLTS----CIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNACLLTGYPVSV 338 (348)
T ss_pred EhhhhcCccCceeec----cCCCCCCeEEEEEEEecCCCceEEEEEcCCCCCcCcCceEEEEcCCCcccccceEEEE
Confidence 998899999999962 7655689999999999988999999999999999999999999999999998655544
No 6
>PTZ00021 falcipain-2; Provisional
Probab=100.00 E-value=5.8e-65 Score=584.17 Aligned_cols=303 Identities=30% Similarity=0.551 Sum_probs=242.6
Q ss_pred CCccCChhHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhccc---------CCCcccccccCCCCCHHHHh-hhcCCCC
Q psy7460 279 GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH---------KKHERYGTSEFSDRSPEEIL-CKTGFKW 348 (1026)
Q Consensus 279 ~~~~~~~~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~F~~n~~---------~~~~~~g~n~fsD~t~eEf~-~~~~~~~ 348 (1026)
..+..++.+....|++|+.+|+|+|.+.+|+.+|+.||++|++ ..++++|+|+|+|||+|||+ .+++.+.
T Consensus 156 ~~~~~~n~e~~~~F~~wk~ky~K~Y~~~eE~~~R~~iF~~Nl~~Ie~hN~~~~~ty~lgiNqFsDlT~EEF~~~~l~~~~ 235 (489)
T PTZ00021 156 SKFLMTNLENVNSFYLFIKEHGKKYQTPDEMQQRYLSFVENLAKINAHNNKENVLYKKGMNRFGDLSFEEFKKKYLTLKS 235 (489)
T ss_pred hhhhccChHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEeccccccCCHHHHHHHhccccc
Confidence 3455666677789999999999999999999999999999953 13578899999999999998 6666542
Q ss_pred CccchhhhhhhhHH-HHHhhh--cccCCCCCCCceeccCCCCCCCCCCCCCCcchHHHHhHHHHHHHHHHHcCCCccCCH
Q psy7460 349 SERTYERIVADREK-VEKMLM--EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSK 425 (1026)
Q Consensus 349 ~~~~~~~~~~~~~~-~~~~~~--~~~~~~~lP~~~DwR~~~~vt~vk~Qg~CgSCwAfa~~~~~e~~~~i~~~~~~~lS~ 425 (1026)
.............. ...... .+.....+|+++|||++|+||||||||.||||||||++++||++++|++++++.||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~s~DWR~~g~VtpVKdQG~CGSCWAFAa~~alEs~~~I~~g~~v~LSe 315 (489)
T PTZ00021 236 FDFKSNGKKSPRVINYDDVIKKYKPKDATFDHAKYDWRLHNGVTPVKDQKNCGSCWAFSTVGVVESQYAIRKNELVSLSE 315 (489)
T ss_pred cccccccccccccccccccccccccccccCCccccccccCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCcccCH
Confidence 11000000000000 000000 001111359999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCCCc-hHHHHH-HhCCcCCCCCCcccCCC-CCccccccCCCCceeeecceeEecCCHHHHHHHH
Q psy7460 426 SQLVECAKQCSGCGGCDGLE-QPIEYT-HQAGLESEKDYPYRNGN-GEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKIL 502 (1026)
Q Consensus 426 q~lvdC~~~~~gC~G~~G~~-~a~~~~-~~~Gi~~e~~ypY~~~~-~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~l 502 (1026)
||||||+..+.||.| |.+ .||+|+ ..+||++|++|||.+.. . .|....... .+.+.+|..++ +++|+++|
T Consensus 316 QqLVDCs~~n~GC~G--G~~~~Af~yi~~~gGl~tE~~YPY~~~~~~---~C~~~~~~~-~~~i~~y~~i~-~~~lk~al 388 (489)
T PTZ00021 316 QELVDCSFKNNGCYG--GLIPNAFEDMIELGGLCSEDDYPYVSDTPE---LCNIDRCKE-KYKIKSYVSIP-EDKFKEAI 388 (489)
T ss_pred HHHhhhccCCCCCCC--cchHhhhhhhhhccccCcccccCccCCCCC---ccccccccc-cceeeeEEEec-HHHHHHHH
Confidence 999999987889999 998 999997 45699999999999874 4 687554332 23567777765 67899999
Q ss_pred HcCCCEEEEEecC-ccccccCCceeCCCCCCCCCCCCeEEEEEEeeecCC----------ccEEEEEcCCCCCCCCCcEE
Q psy7460 503 YKYGPLSVGLNSH-LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD----------IPYWLARNSWGPIGPDEGFF 571 (1026)
Q Consensus 503 ~~~gPv~v~i~~~-~~~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyG~~~g----------~~YWivkNSWG~~WGe~Gy~ 571 (1026)
+.+|||+|+|++. .|++|++||| +..|+. .+||||+|||||++++ .+|||||||||++|||+|||
T Consensus 389 ~~~GPVsv~i~a~~~f~~YkgGIy---~~~C~~-~~nHAVlIVGYG~e~~~~~~~~~~~~~~YWIVKNSWGt~WGE~GY~ 464 (489)
T PTZ00021 389 RFLGPISVSIAVSDDFAFYKGGIF---DGECGE-EPNHAVILVGYGMEEIYNSDTKKMEKRYYYIIKNSWGESWGEKGFI 464 (489)
T ss_pred HhcCCeEEEEEeecccccCCCCcC---CCCCCC-ccceEEEEEEecCcCCcccccccCCCCCEEEEECCCCCCcccCeEE
Confidence 9999999999994 7999999999 456875 4899999999997642 57999999999999999999
Q ss_pred EEEecC----CcccccceeeeeEEe
Q psy7460 572 KIERGN----NACGIEQIAGYATID 592 (1026)
Q Consensus 572 ri~r~~----n~cgi~~~~~~~~~~ 592 (1026)
||+|+. |+|||++.++||+++
T Consensus 465 rI~r~~~g~~n~CGI~t~a~yP~~~ 489 (489)
T PTZ00021 465 RIETDENGLMKTCSLGTEAYVPLIE 489 (489)
T ss_pred EEEcCCCCCCCCCCCcccceeEecC
Confidence 999996 589999999999864
No 7
>PTZ00200 cysteine proteinase; Provisional
Probab=100.00 E-value=6.3e-64 Score=575.17 Aligned_cols=325 Identities=28% Similarity=0.500 Sum_probs=263.2
Q ss_pred cCCCCCcchhhhHHhhhhhhhhcCCCCCChhhH---HHHHHHHHHHhCCcCCCHHHHHHHHHHHHHhh-----hC--CCc
Q psy7460 622 CLPSLTDRITDQVVARVDTLAIEGSLTFDNENI---LETFKAFIVKRGRQYANDEEIKERFEYFKQDG-----HK--KHE 691 (1026)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~f~~f~~~~~k~Y~~~~E~~~R~~iF~~N~-----~~--~~~ 691 (1026)
-+|.+....++..+.+++.|+.++.++.++..+ ...|++|+++|+|.|.+.+|+.+|+.+|++|+ ++ ..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~e~~~~F~~f~~ky~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~~y 166 (448)
T PTZ00200 87 DFPRLDKSKRDSYVDELTRLFKDGYISDDPKLEFEVYLEFEEFNKKYNRKHATHAERLNRFLTFRNNYLEVKSHKGDEPY 166 (448)
T ss_pred cCCCcChhHHHHHHHHHHHHhhCCCcCCCccchHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHhcCcCCe
Confidence 345666788999999999999999998876544 46799999999999999999999999999996 23 246
Q ss_pred ccccCcCCCCCHHHHH-hhcCCCCCchhh-----hhhhhhhhhhhh--hhhcc---------cCCCCCCCceecCCCCCC
Q psy7460 692 RYGTSEFSDRSPEEIL-CKTGFKWSERTY-----ERIVADREKVEK--MLMEV---------EKDGPVPDAWDWRKKNVT 754 (1026)
Q Consensus 692 ~~giN~faD~t~eEf~-~~~g~~~~~~~~-----~~~~~~~~~~~~--~~~~~---------~~~~~lP~s~DwR~~g~v 754 (1026)
++|+|+|||||+|||. .+++.+.+.... .....+...... ...+. .....+|+++|||+.|.|
T Consensus 167 ~lgiN~FsDlT~eEF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~DWR~~g~v 246 (448)
T PTZ00200 167 SKEINKFSDLTEEEFRKLFPVIKVPPKSNSTSHNNDFKARHVSNPTYLKNLKKAKNTDEDVKDPSKITGEGLDWRRADAV 246 (448)
T ss_pred EEeccccccCCHHHHHHHhccCCCcccccccccccccccccccccccccccccccccccccccccccCCCCccCCCCCCC
Confidence 7899999999999998 555544321100 000000000000 00000 001236999999999999
Q ss_pred CCCCCCC-CCchHHHHHHHHHHHHHHHHhcCCceecCHHHHHhhcCCCCCCCCCCchHHHHHHHHcCCCCCCcccCcCCC
Q psy7460 755 GPAGDQA-ACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNAN 833 (1026)
Q Consensus 755 ~pv~dQg-~CGSCWAfa~~~ale~~~~i~~~~~~~lS~Q~lvdC~~~~~gC~GG~~~~a~~y~~~~Gi~~e~~yPY~~~~ 833 (1026)
+|||||| .||||||||+++++|++++|++++.+.||+|+|+||+..+.||+||.+..||+|++++||++|++|||.+.+
T Consensus 247 tpVkdQG~~CGSCWAFat~~aiEs~~~i~~~~~~~LSeQqLvDC~~~~~GC~GG~~~~A~~yi~~~Gi~~e~~YPY~~~~ 326 (448)
T PTZ00200 247 TKVKDQGLNCGSCWAFSSVGSVESLYKIYRDKSVDLSEQELVNCDTKSQGCSGGYPDTALEYVKNKGLSSSSDVPYLAKD 326 (448)
T ss_pred CCcccCCCccchHHHHhHHHHHHHHHHHhcCCCeecCHHHHhhccCccCCCCCCcHHHHHHHHhhcCccccccCCCCCCC
Confidence 9999999 999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred CCcccccCCCCcceEEecceeeecChHHHHHHHHHhcCCEEEEEeC-CCCcccCCcceeCCCCCCCCCCCCeEEEEEEee
Q psy7460 834 GEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 912 (1026)
Q Consensus 834 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i~~-~~f~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyg 912 (1026)
+ .|...... .+.+..|..+.+.+.|++++ .+|||+|+|++ ..|++|++|||.++ |+.. ++|||+|||||
T Consensus 327 ~---~C~~~~~~--~~~i~~y~~~~~~~~l~~~l-~~GPV~v~i~~~~~f~~Yk~GIy~~~---C~~~-~nHaV~lVGyG 396 (448)
T PTZ00200 327 G---KCVVSSTK--KVYIDSYLVAKGKDVLNKSL-VISPTVVYIAVSRELLKYKSGVYNGE---CGKS-LNHAVLLVGEG 396 (448)
T ss_pred C---CCcCCCCC--eeEecceEecCHHHHHHHHH-hcCCEEEEeecccccccCCCCccccc---cCCC-CcEEEEEEEec
Confidence 7 89765432 23567777777666677666 57999999998 47999999999764 8654 89999999999
Q ss_pred e--cCCccEEEEEcCCCCCCCCCcEEEEEec---CCccccCCcceEEEE
Q psy7460 913 K--QDNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYATI 956 (1026)
Q Consensus 913 ~--~~g~~yWivkNSWG~~WGe~Gy~~i~r~---~n~cGi~~~~~~~~~ 956 (1026)
. ++|.+|||||||||++|||+|||||+|+ .|.|||++.+.||++
T Consensus 397 ~d~~~g~~YWIIkNSWG~~WGe~GY~ri~r~~~g~n~CGI~~~~~~P~~ 445 (448)
T PTZ00200 397 YDEKTKKRYWIIKNSWGTDWGENGYMRLERTNEGTDKCGILTVGLTPVF 445 (448)
T ss_pred ccCCCCCceEEEEcCCCCCcccCeeEEEEeCCCCCCcCCccccceeeEE
Confidence 5 4688999999999999999999999995 589999999999986
No 8
>PTZ00021 falcipain-2; Provisional
Probab=100.00 E-value=6.4e-63 Score=567.30 Aligned_cols=294 Identities=30% Similarity=0.540 Sum_probs=236.4
Q ss_pred HHHHHHHHHHhCCcCCCHHHHHHHHHHHHHhh-----hC----CCcccccCcCCCCCHHHHH-hhcCCCCCchhhhhhhh
Q psy7460 655 LETFKAFIVKRGRQYANDEEIKERFEYFKQDG-----HK----KHERYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVA 724 (1026)
Q Consensus 655 ~~~f~~f~~~~~k~Y~~~~E~~~R~~iF~~N~-----~~----~~~~~giN~faD~t~eEf~-~~~g~~~~~~~~~~~~~ 724 (1026)
...|++|+.+|+|+|.+.+|+.+|+.||++|+ ++ .++++|+|+|||||.|||+ .+++.+...........
T Consensus 166 ~~~F~~wk~ky~K~Y~~~eE~~~R~~iF~~Nl~~Ie~hN~~~~~ty~lgiNqFsDlT~EEF~~~~l~~~~~~~~~~~~~~ 245 (489)
T PTZ00021 166 VNSFYLFIKEHGKKYQTPDEMQQRYLSFVENLAKINAHNNKENVLYKKGMNRFGDLSFEEFKKKYLTLKSFDFKSNGKKS 245 (489)
T ss_pred HHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEeccccccCCHHHHHHHhccccccccccccccc
Confidence 46799999999999999999999999999996 22 2467899999999999999 56654321000000000
Q ss_pred hhhhhhh---hhhcccCCCCCCCceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHhcCCceecCHHHHHhhcCCC
Q psy7460 725 DREKVEK---MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQC 801 (1026)
Q Consensus 725 ~~~~~~~---~~~~~~~~~~lP~s~DwR~~g~v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~~~~~lS~Q~lvdC~~~~ 801 (1026)
....... ..........+|+++|||++|+|+||||||.||||||||++++||++++|++++++.||+|+||||+..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~P~s~DWR~~g~VtpVKdQG~CGSCWAFAa~~alEs~~~I~~g~~v~LSeQqLVDCs~~n 325 (489)
T PTZ00021 246 PRVINYDDVIKKYKPKDATFDHAKYDWRLHNGVTPVKDQKNCGSCWAFSTVGVVESQYAIRKNELVSLSEQELVDCSFKN 325 (489)
T ss_pred cccccccccccccccccccCCccccccccCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCcccCHHHHhhhccCC
Confidence 0000000 0000001113599999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCCCchHHHHHHH-HcCCCCCCcccCcCCC-CCcccccCCCCcceEEecceeeecChHHHHHHHHHhcCCEEEEEeC
Q psy7460 802 SGCDGCFFEPSIEYTH-QAGLESEKDYPYKNAN-GEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 879 (1026)
Q Consensus 802 ~gC~GG~~~~a~~y~~-~~Gi~~e~~yPY~~~~-~~~~~C~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i~~ 879 (1026)
.||+||.+..||+|+. ..||++|++|||.+.. + .|....+.. .+++.+|..++ +++|+++|+.+|||+|+|++
T Consensus 326 ~GC~GG~~~~Af~yi~~~gGl~tE~~YPY~~~~~~---~C~~~~~~~-~~~i~~y~~i~-~~~lk~al~~~GPVsv~i~a 400 (489)
T PTZ00021 326 NGCYGGLIPNAFEDMIELGGLCSEDDYPYVSDTPE---LCNIDRCKE-KYKIKSYVSIP-EDKFKEAIRFLGPISVSIAV 400 (489)
T ss_pred CCCCCcchHhhhhhhhhccccCcccccCccCCCCC---ccccccccc-cceeeeEEEec-HHHHHHHHHhcCCeEEEEEe
Confidence 9999999999999985 4599999999999864 4 787554332 34677887776 57899999999999999999
Q ss_pred -CCCcccCCcceeCCCCCCCCCCCCeEEEEEEeeecCC----------ccEEEEEcCCCCCCCCCcEEEEEecC----Cc
Q psy7460 880 -DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN----------IPYWLVRNSWGPIGPDEGFFKIERGN----NA 944 (1026)
Q Consensus 880 -~~f~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyg~~~g----------~~yWivkNSWG~~WGe~Gy~~i~r~~----n~ 944 (1026)
+.|++|++|||... |+. .++|||+|||||++++ .+|||||||||+.|||+|||||+|+. |+
T Consensus 401 ~~~f~~YkgGIy~~~---C~~-~~nHAVlIVGYG~e~~~~~~~~~~~~~~YWIVKNSWGt~WGE~GY~rI~r~~~g~~n~ 476 (489)
T PTZ00021 401 SDDFAFYKGGIFDGE---CGE-EPNHAVILVGYGMEEIYNSDTKKMEKRYYYIIKNSWGESWGEKGFIRIETDENGLMKT 476 (489)
T ss_pred ecccccCCCCcCCCC---CCC-ccceEEEEEEecCcCCcccccccCCCCCEEEEECCCCCCcccCeEEEEEcCCCCCCCC
Confidence 57999999999754 864 4899999999997642 47999999999999999999999985 58
Q ss_pred cccCCcceEEEEe
Q psy7460 945 CGIEQIAGYATID 957 (1026)
Q Consensus 945 cGi~~~~~~~~~~ 957 (1026)
|||++.+.||.++
T Consensus 477 CGI~t~a~yP~~~ 489 (489)
T PTZ00021 477 CSLGTEAYVPLIE 489 (489)
T ss_pred CCCcccceeEecC
Confidence 9999999999864
No 9
>KOG1543|consensus
Probab=100.00 E-value=1.1e-59 Score=524.54 Aligned_cols=275 Identities=35% Similarity=0.646 Sum_probs=232.7
Q ss_pred HHHhCCCCCChHHHHHHHHHHHhccc---------CCCcccccccCCCCCHHHHh-hhcCCCCCccchhhhhhhhHHHHH
Q psy7460 296 IVKRGRQYANDEEIKERFEYFKQDGH---------KKHERYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEK 365 (1026)
Q Consensus 296 ~~~~~k~Y~~~~E~~~R~~~F~~n~~---------~~~~~~g~n~fsD~t~eEf~-~~~~~~~~~~~~~~~~~~~~~~~~ 365 (1026)
+.+|.+.|.+..|+..|+.+|.+|++ ..++++|+|+|+|+|.|||+ .+++++.+..... +
T Consensus 30 ~~~~~~~y~~~~~~~~r~~~f~~n~~~~~~~n~~~~~~~~~g~n~~~d~~~ee~~~~~~~~~~~~~~~~-------~--- 99 (325)
T KOG1543|consen 30 LVKFLKRYEDRVEKKARRAIFKENLQKIESHNLKYVLSFLMGVNQFADLTTEEFKRKKTGKKPPEIKRD-------K--- 99 (325)
T ss_pred hhhhccccccHHHHHHHHHHHHHHHHHHHhhhhhhceeeeeccccccccchHHHHHhhccccCcccccc-------c---
Confidence 66777888777899999999999942 34567899999999999998 6666654332100 0
Q ss_pred hhhcccCCCCCCCceeccCCCCC-CCCCCCCCCcchHHHHhHHHHHHHHHHHcC-CCccCCHHHHHhhhcC-CCCCCCCC
Q psy7460 366 MLMEVEKDGPVPDAWDWRKKNVT-GPAGDQAACGSCWAFSIAGMLEGQYAIKTG-KLVEFSKSQLVECAKQ-CSGCGGCD 442 (1026)
Q Consensus 366 ~~~~~~~~~~lP~~~DwR~~~~v-t~vk~Qg~CgSCwAfa~~~~~e~~~~i~~~-~~~~lS~q~lvdC~~~-~~gC~G~~ 442 (1026)
........++|++||||+++.+ +|||||+.||||||||++++||++++|+++ .++.||+||||||+.. +.||+|
T Consensus 100 -~~~~~~~~~~p~s~DwR~~~~~~~~vkdQg~CgsCWAFaa~~aie~~~~i~~g~~l~sLSeq~lvdC~~~~~~GC~G-- 176 (325)
T KOG1543|consen 100 -FTEKLDGDDLPDSFDWRDKGAVTPPVKDQGSCGSCWAFAATGALEDRYNIKTGGKLLSLSEQDLVDCCGECGDGCNG-- 176 (325)
T ss_pred -cccccchhhCCCCccccccCCcCCCcCCCCcCcchHHHHHHHHHHHHHHHHhCCccCccChhhhhhccCCCCCCcCC--
Confidence 0111234579999999999754 559999999999999999999999999999 8999999999999985 789999
Q ss_pred CCc-hHHHHHHhCCcCC-CCCCcccCCCCCccccccCCCCceeeecceeEecCCHHHHHHHHHcCCCEEEEEecC-cccc
Q psy7460 443 GLE-QPIEYTHQAGLES-EKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSH-LIHF 519 (1026)
Q Consensus 443 G~~-~a~~~~~~~Gi~~-e~~ypY~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gPv~v~i~~~-~~~~ 519 (1026)
|.+ .||+|++.+|+.+ +.+|||.+.+. .|..+.....+.....+..+.+|++|+++|+++|||+|+|++. .|++
T Consensus 177 G~~~~A~~yi~~~G~~t~~~~Ypy~~~~~---~C~~~~~~~~~~~~~~~~~~~~e~~i~~~v~~~GPv~v~~~a~~~F~~ 253 (325)
T KOG1543|consen 177 GEPKNAFKYIKKNGGVTECENYPYIGKDG---TCKSNKKDKTVTIKGFYNVPANEEAIAEAVAKNGPVSVAIDAYEDFSL 253 (325)
T ss_pred CCHHHHHHHHHHhCCCCCCcCCCCcCCCC---CccCCCccceeEeeeeeecCcCHHHHHHHHHhcCCeEEEEeehhhhhh
Confidence 999 9999998888888 99999999988 9998887555545555556668999999999999999999995 7999
Q ss_pred ccCCceeCCCCCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCcEEEEEecCCcccccceeee
Q psy7460 520 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588 (1026)
Q Consensus 520 y~~Gi~~~~~~~c~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~Gy~ri~r~~n~cgi~~~~~~ 588 (1026)
|++|||.+. .|....++|||+|||||+.++++|||||||||+.|||+|||||.|+.|.|+|++.+.|
T Consensus 254 Y~~GVy~~~--~~~~~~~~Hav~iVGyG~~~~~~YWivkNSWG~~WGe~Gy~ri~r~~~~~~I~~~~~~ 320 (325)
T KOG1543|consen 254 YKGGVYAEE--KGDDKEGDHAVLIVGYGTGDGVDYWIVKNSWGTDWGEKGYFRIARGVNKCGIASEASY 320 (325)
T ss_pred ccCceEeCC--CCCCCCCCceEEEEEEcCCCCceeEEEEcCCCCCcccCceEEEecCCCchhhhccccc
Confidence 999999532 3332258999999999996678999999999999999999999999999999999998
No 10
>KOG1543|consensus
Probab=100.00 E-value=1.4e-57 Score=507.54 Aligned_cols=276 Identities=35% Similarity=0.630 Sum_probs=232.2
Q ss_pred HHHhCCcCCCHHHHHHHHHHHHHhh---h------CCCcccccCcCCCCCHHHHH-hhcCCCCCchhhhhhhhhhhhhhh
Q psy7460 662 IVKRGRQYANDEEIKERFEYFKQDG---H------KKHERYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEK 731 (1026)
Q Consensus 662 ~~~~~k~Y~~~~E~~~R~~iF~~N~---~------~~~~~~giN~faD~t~eEf~-~~~g~~~~~~~~~~~~~~~~~~~~ 731 (1026)
+.+|.+.|.+..|...|+.+|.+|+ . ..++.+++|+|+|+|.+|++ .+.+.+...... .
T Consensus 30 ~~~~~~~y~~~~~~~~r~~~f~~n~~~~~~~n~~~~~~~~~g~n~~~d~~~ee~~~~~~~~~~~~~~~-----------~ 98 (325)
T KOG1543|consen 30 LVKFLKRYEDRVEKKARRAIFKENLQKIESHNLKYVLSFLMGVNQFADLTTEEFKRKKTGKKPPEIKR-----------D 98 (325)
T ss_pred hhhhccccccHHHHHHHHHHHHHHHHHHHhhhhhhceeeeeccccccccchHHHHHhhccccCccccc-----------c
Confidence 6778888887789999999999995 1 24557899999999999998 555554432200 0
Q ss_pred hhhcccCCCCCCCceecCCCC-CCCCCCCCCCCchHHHHHHHHHHHHHHHHhcC-CceecCHHHHHhhcCC-CCCCCCCC
Q psy7460 732 MLMEVEKDGPVPDAWDWRKKN-VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTG-KLVEFSKSQLVECAKQ-CSGCDGCF 808 (1026)
Q Consensus 732 ~~~~~~~~~~lP~s~DwR~~g-~v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~-~~~~lS~Q~lvdC~~~-~~gC~GG~ 808 (1026)
.........++|++||||++| .++||||||.||||||||+++|||++++|++| .++.||+|+|+||+.. +.||+||.
T Consensus 99 ~~~~~~~~~~~p~s~DwR~~~~~~~~vkdQg~CgsCWAFaa~~aie~~~~i~~g~~l~sLSeq~lvdC~~~~~~GC~GG~ 178 (325)
T KOG1543|consen 99 KFTEKLDGDDLPDSFDWRDKGAVTPPVKDQGSCGSCWAFAATGALEDRYNIKTGGKLLSLSEQDLVDCCGECGDGCNGGE 178 (325)
T ss_pred ccccccchhhCCCCccccccCCcCCCcCCCCcCcchHHHHHHHHHHHHHHHHhCCccCccChhhhhhccCCCCCCcCCCC
Confidence 111222346899999999997 45559999999999999999999999999999 8999999999999984 88999999
Q ss_pred chHHHHHHHHcCCCC-CCcccCcCCCCCcccccCCCCcceEEecceeeecChHHHHHHHHHhcCCEEEEEeC-CCCcccC
Q psy7460 809 FEPSIEYTHQAGLES-EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYN 886 (1026)
Q Consensus 809 ~~~a~~y~~~~Gi~~-e~~yPY~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i~~-~~f~~y~ 886 (1026)
+..|++|++++|+++ +++|||.+.++ .|..+.....+.....+....++++|+++|+++|||+|+|++ ..|++|+
T Consensus 179 ~~~A~~yi~~~G~~t~~~~Ypy~~~~~---~C~~~~~~~~~~~~~~~~~~~~e~~i~~~v~~~GPv~v~~~a~~~F~~Y~ 255 (325)
T KOG1543|consen 179 PKNAFKYIKKNGGVTECENYPYIGKDG---TCKSNKKDKTVTIKGFYNVPANEEAIAEAVAKNGPVSVAIDAYEDFSLYK 255 (325)
T ss_pred HHHHHHHHHHhCCCCCCcCCCCcCCCC---CccCCCccceeEeeeeeecCcCHHHHHHHHHhcCCeEEEEeehhhhhhcc
Confidence 999999999988888 99999999998 999887644443333344455799999999999999999998 5799999
Q ss_pred CcceeCCCCCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCcEEEEEecCCccccCCcceE
Q psy7460 887 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 953 (1026)
Q Consensus 887 ~Gi~~~~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cGi~~~~~~ 953 (1026)
+|||.++. |....++|||+|||||+.++.+|||||||||+.|||+|||||.|+.+.|+|++.+.|
T Consensus 256 ~GVy~~~~--~~~~~~~Hav~iVGyG~~~~~~YWivkNSWG~~WGe~Gy~ri~r~~~~~~I~~~~~~ 320 (325)
T KOG1543|consen 256 GGVYAEEK--GDDKEGDHAVLIVGYGTGDGVDYWIVKNSWGTDWGEKGYFRIARGVNKCGIASEASY 320 (325)
T ss_pred CceEeCCC--CCCCCCCceEEEEEEcCCCCceeEEEEcCCCCCcccCceEEEecCCCchhhhccccc
Confidence 99999873 332269999999999996678999999999999999999999999999999998887
No 11
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity. It can also act as a carboxydipeptidase, like cathepsin B, but has been shown to preferentially cleave substrates through a monopeptidyl carboxypeptidase pathway. The propeptide region of cathepsin X, the shortest among papain-like peptidases, is covalently attached to the active site cysteine in the inactive form of the enzyme. Little is known about the biological function of cathepsin X. Some studies point to a role in early tumorigenesis. A more recent study indicates that cathepsin X expression is restricted to immune cells suggesting a role in phagocytosis and the regulation of the immune response.
Probab=100.00 E-value=6.7e-52 Score=447.32 Aligned_cols=207 Identities=29% Similarity=0.601 Sum_probs=181.1
Q ss_pred CCCceeccCCC---CCCCCCCCC---CCcchHHHHhHHHHHHHHHHHcC---CCccCCHHHHHhhhcCCCCCCCCCCCc-
Q psy7460 376 VPDAWDWRKKN---VTGPAGDQA---ACGSCWAFSIAGMLEGQYAIKTG---KLVEFSKSQLVECAKQCSGCGGCDGLE- 445 (1026)
Q Consensus 376 lP~~~DwR~~~---~vt~vk~Qg---~CgSCwAfa~~~~~e~~~~i~~~---~~~~lS~q~lvdC~~~~~gC~G~~G~~- 445 (1026)
||++||||+++ +|+|||||| .||||||||++++||++++|+++ +.+.||+|+|+||+. +.||.| |.+
T Consensus 1 lP~~~Dwr~~~~~~~v~~vk~Qg~~~~CGsCwAfa~~~aies~~~i~~~~~~~~~~lS~Q~lldC~~-~~gC~G--G~~~ 77 (239)
T cd02698 1 LPKSWDWRNVNGVNYVSPTRNQHIPQYCGSCWAHGSTSALADRINIARKGAWPSVYLSVQVVIDCAG-GGSCHG--GDPG 77 (239)
T ss_pred CCCCcccccCCCCcccCccccCCCCCCCCcchHHHhHHHHHHHHHHHHCCCCCCcccCHHHHHhCCC-CCCccC--cCHH
Confidence 69999999988 999999998 89999999999999999999875 367999999999987 789999 999
Q ss_pred hHHHHHHhCCcCCCCCCcccCCCCCcccccc---------CC-----CCceeeecceeEecCCHHHHHHHHHcCCCEEEE
Q psy7460 446 QPIEYTHQAGLESEKDYPYRNGNGEKFKCAY---------DK-----SKVKLFTGKDFLYFNGSETMKKILYKYGPLSVG 511 (1026)
Q Consensus 446 ~a~~~~~~~Gi~~e~~ypY~~~~~~~~~C~~---------~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~gPv~v~ 511 (1026)
.|++|+++.|+++|++|||.+.+. .|.. .. .....+.+..|..+.++++||++|+++|||+|+
T Consensus 78 ~a~~~~~~~Gl~~e~~yPY~~~~~---~C~~~~~~~~c~~~~~c~~~~~~~~~~i~~~~~~~~~~~i~~~l~~~GPV~v~ 154 (239)
T cd02698 78 GVYEYAHKHGIPDETCNPYQAKDG---ECNPFNRCGTCNPFGECFAIKNYTLYFVSDYGSVSGRDKMMAEIYARGPISCG 154 (239)
T ss_pred HHHHHHHHcCcCCCCeeCCcCCCC---CCcCCCCCCCcccCcccccccccceEEeeeceecCCHHHHHHHHHHcCCEEEE
Confidence 999999999999999999998765 3431 10 112334567777777899999999999999999
Q ss_pred EecC-ccccccCCceeCCCCCCCCCCCCeEEEEEEeeecC-CccEEEEEcCCCCCCCCCcEEEEEecC-----Ccccccc
Q psy7460 512 LNSH-LIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-DIPYWLARNSWGPIGPDEGFFKIERGN-----NACGIEQ 584 (1026)
Q Consensus 512 i~~~-~~~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyG~~~-g~~YWivkNSWG~~WGe~Gy~ri~r~~-----n~cgi~~ 584 (1026)
|.+. .|++|++|||.. ..|. ..++|||+|||||+++ +++|||||||||++|||+|||||+|+. |.||||+
T Consensus 155 i~~~~~f~~Y~~GIy~~--~~~~-~~~~HaV~IVGyG~~~~g~~YWiikNSWG~~WGe~Gy~~i~rg~~~~~~~~~~i~~ 231 (239)
T cd02698 155 IMATEALENYTGGVYKE--YVQD-PLINHIISVAGWGVDENGVEYWIVRNSWGEPWGERGWFRIVTSSYKGARYNLAIEE 231 (239)
T ss_pred EEecccccccCCeEEcc--CCCC-CcCCeEEEEEEEEecCCCCEEEEEEcCCCcccCcCceEEEEccCCccccccccccc
Confidence 9995 799999999942 2343 4679999999999876 999999999999999999999999999 9999999
Q ss_pred eeeeeEE
Q psy7460 585 IAGYATI 591 (1026)
Q Consensus 585 ~~~~~~~ 591 (1026)
.|.|+.|
T Consensus 232 ~~~~~~~ 238 (239)
T cd02698 232 DCAWADP 238 (239)
T ss_pred ceEEEee
Confidence 9999876
No 12
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access. Each subunit of the tetramer is composed of three peptides: the heavy and light chains, which together adopts the papain fold and forms the catalytic domain; and the residual propeptide region, which forms a beta barrel and points towards the substrate's N-terminus. The subunit composition is the result of the unique characteristic of procathepsin C maturation involving the cleavage of the catalytic domain and the non-autocatalytic excision of an activation peptide within its propeptide region. By removing N-terminal dipeptide extensions, cathepsin C activates granule serine peptidases (granzymes) involved in cell-mediated apoptosis, inflammation and tissue remodelling. Loss-of-function mutations in cathepsin C are assoc
Probab=100.00 E-value=1e-51 Score=447.86 Aligned_cols=210 Identities=31% Similarity=0.625 Sum_probs=180.1
Q ss_pred CCCceeccCCC----CCCCCCCCCCCcchHHHHhHHHHHHHHHHHcCC------CccCCHHHHHhhhcCCCCCCCCCCCc
Q psy7460 376 VPDAWDWRKKN----VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK------LVEFSKSQLVECAKQCSGCGGCDGLE 445 (1026)
Q Consensus 376 lP~~~DwR~~~----~vt~vk~Qg~CgSCwAfa~~~~~e~~~~i~~~~------~~~lS~q~lvdC~~~~~gC~G~~G~~ 445 (1026)
||++||||+++ +|+|||||+.||||||||++++||++++|++++ .+.||+|||+||+..+.||+| |.+
T Consensus 1 lP~~fDwr~~~~~~~~v~~v~dQg~CGsCwAfa~~~~ies~~~i~~~~~~~~~~~~~lS~q~l~dC~~~~~GC~G--G~~ 78 (243)
T cd02621 1 LPKSFDWGDVNNGFNYVSPVRNQGGCGSCYAFASVYALEARIMIASNKTDPLGQQPILSPQHVLSCSQYSQGCDG--GFP 78 (243)
T ss_pred CCCcccccccCCCCcccccCCCCCcCccHHHHHHHHHHHHHHHHHhCCCCccccCcccCHHHhhhhcCCCCCCCC--CCH
Confidence 79999999998 999999999999999999999999999999876 789999999999977789999 999
Q ss_pred -hHHHHHHhCCcCCCCCCcccC-CCCCccccccCC-CCceeeecce------eEecCCHHHHHHHHHcCCCEEEEEecC-
Q psy7460 446 -QPIEYTHQAGLESEKDYPYRN-GNGEKFKCAYDK-SKVKLFTGKD------FLYFNGSETMKKILYKYGPLSVGLNSH- 515 (1026)
Q Consensus 446 -~a~~~~~~~Gi~~e~~ypY~~-~~~~~~~C~~~~-~~~~~~~~~~------~~~~~~~~~~~~~l~~~gPv~v~i~~~- 515 (1026)
.|++|+++.||++|++|||.+ ... .|.... ...+ +.+.. +..+.++++||++|+++|||+|+|++.
T Consensus 79 ~~a~~~~~~~Gi~~e~~yPY~~~~~~---~C~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~ik~~i~~~GPv~v~~~~~~ 154 (243)
T cd02621 79 FLVGKFAEDFGIVTEDYFPYTADDDR---PCKASPSECRR-YYFSDYNYVGGCYGCTNEDEMKWEIYRNGPIVVAFEVYS 154 (243)
T ss_pred HHHHHHHHhcCcCCCceeCCCCCCCC---CCCCCcccccc-ccccceeEcccccccCCHHHHHHHHHHcCCEEEEEEecc
Confidence 999999999999999999998 455 687544 2221 12222 333468999999999999999999994
Q ss_pred ccccccCCceeCCC--CCCCC--------CCCCeEEEEEEeeecC--CccEEEEEcCCCCCCCCCcEEEEEecCCccccc
Q psy7460 516 LIHFYNGTPIRKND--ETCSP--------YDLGHAVLLVGYGKQD--DIPYWLARNSWGPIGPDEGFFKIERGNNACGIE 583 (1026)
Q Consensus 516 ~~~~y~~Gi~~~~~--~~c~~--------~~~~HaV~iVGyG~~~--g~~YWivkNSWG~~WGe~Gy~ri~r~~n~cgi~ 583 (1026)
.|++|++|||.... ..|.. ..++|||+|||||+++ +++|||||||||++|||+|||||+|+.|.|||+
T Consensus 155 ~F~~Y~~GIy~~~~~~~~C~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiirNSWG~~WGe~Gy~~i~~~~~~cgi~ 234 (243)
T cd02621 155 DFDFYKEGVYHHTDNDEVSDGDNDNFNPFELTNHAVLLVGWGEDEIKGEKYWIVKNSWGSSWGEKGYFKIRRGTNECGIE 234 (243)
T ss_pred cccccCCeEECcCCcccccccccccccCcccCCeEEEEEEeeccCCCCCcEEEEEcCCCCCCCcCCeEEEecCCcccCcc
Confidence 79999999995321 12643 2479999999999876 899999999999999999999999999999999
Q ss_pred ceeeeeEE
Q psy7460 584 QIAGYATI 591 (1026)
Q Consensus 584 ~~~~~~~~ 591 (1026)
+.+.++.|
T Consensus 235 ~~~~~~~~ 242 (243)
T cd02621 235 SQAVFAYP 242 (243)
T ss_pred cceEeecc
Confidence 99988754
No 13
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an exopeptidase through its carboxydipeptidyl activity. Together with other cathepsins, it is involved in the degradation of proteins, proenzyme activation, Ag processing, metabolism and apoptosis. Cathepsin B has been implicated in a number of human diseases such as cancer, rheumatoid arthritis, osteoporosis and Alzheimer's disease. The unique carboxydipeptidyl activity of cathepsin B is attributed to the presence of an occluding loop in its active site which favors the binding of the C-termini of substrate proteins. Some members of this group do not possess the occluding loop. TIN-Ag is an extracellular matrix basement protein which was originally identified as a target Ag involved in anti-tubular basement membrane
Probab=100.00 E-value=7.3e-51 Score=438.41 Aligned_cols=207 Identities=30% Similarity=0.578 Sum_probs=174.7
Q ss_pred CCceeccCC--CC--CCCCCCCCCCcchHHHHhHHHHHHHHHHHcC--CCccCCHHHHHhhhcC-CCCCCCCCCCc-hHH
Q psy7460 377 PDAWDWRKK--NV--TGPAGDQAACGSCWAFSIAGMLEGQYAIKTG--KLVEFSKSQLVECAKQ-CSGCGGCDGLE-QPI 448 (1026)
Q Consensus 377 P~~~DwR~~--~~--vt~vk~Qg~CgSCwAfa~~~~~e~~~~i~~~--~~~~lS~q~lvdC~~~-~~gC~G~~G~~-~a~ 448 (1026)
|++||||++ ++ |+||||||.||||||||++++||++++|+++ +.+.||+||||||+.. +.||+| |.+ .|+
T Consensus 1 p~~~DwR~~~~~~~~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~~~LS~Q~lidC~~~~~~gC~G--G~~~~a~ 78 (236)
T cd02620 1 PESFDAREKWPNCISIGEIRDQGNCGSCWAFSAVEAFSDRLCIQSNGKENVLLSAQDLLSCCSGCGDGCNG--GYPDAAW 78 (236)
T ss_pred CCcccchhhCCCCCCccccCCcccchhHHHHHHHHHHhhHHHHhcCCCCccccCHHHHHhhcCCCCCCCCC--CCHHHHH
Confidence 899999997 44 4599999999999999999999999999988 7899999999999986 789999 999 999
Q ss_pred HHHHhCCcCCCCCCcccCCCCCc---------------cccccCCC---CceeeecceeEe-cCCHHHHHHHHHcCCCEE
Q psy7460 449 EYTHQAGLESEKDYPYRNGNGEK---------------FKCAYDKS---KVKLFTGKDFLY-FNGSETMKKILYKYGPLS 509 (1026)
Q Consensus 449 ~~~~~~Gi~~e~~ypY~~~~~~~---------------~~C~~~~~---~~~~~~~~~~~~-~~~~~~~~~~l~~~gPv~ 509 (1026)
+|+++.|+++|++|||.+.+... ..|..... ....+.+..+.. ..++++||++|+++|||+
T Consensus 79 ~~i~~~G~~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPv~ 158 (236)
T cd02620 79 KYLTTTGVVTGGCQPYTIPPCGHHPEGPPPCCGTPYCTPKCQDGCEKTYEEDKHKGKSAYSVPSDETDIMKEIMTNGPVQ 158 (236)
T ss_pred HHHHhcCCCcCCEecCcCCCCccCCCCCCCCCCCCCCCCCCCcCCccccceeeeeecceeeeCCHHHHHHHHHHHCCCeE
Confidence 99999999999999998875421 13543321 111223333333 347899999999999999
Q ss_pred EEEec-CccccccCCceeCCCCCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCcEEEEEecCCcccccceeee
Q psy7460 510 VGLNS-HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGY 588 (1026)
Q Consensus 510 v~i~~-~~~~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~Gy~ri~r~~n~cgi~~~~~~ 588 (1026)
|+|++ +.|++|++|||. ..|+...++|||+|||||++++++|||||||||+.|||+|||||+|+.|+|||++.+..
T Consensus 159 v~i~~~~~f~~Y~~Giy~---~~~~~~~~~HaV~iVGyg~~~g~~YWivrNSWG~~WGe~Gy~ri~~~~~~cgi~~~~~~ 235 (236)
T cd02620 159 AAFTVYEDFLYYKSGVYQ---HTSGKQLGGHAVKIIGWGVENGVPYWLAANSWGTDWGENGYFRILRGSNECGIESEVVA 235 (236)
T ss_pred EEEEechhhhhcCCcEEe---ecCCCCcCCeEEEEEEEeccCCeeEEEEEeCCCCCCCCCcEEEEEccCcccccccceec
Confidence 99999 589999999994 33655567999999999999999999999999999999999999999999999998753
No 14
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity. It can also act as a carboxydipeptidase, like cathepsin B, but has been shown to preferentially cleave substrates through a monopeptidyl carboxypeptidase pathway. The propeptide region of cathepsin X, the shortest among papain-like peptidases, is covalently attached to the active site cysteine in the inactive form of the enzyme. Little is known about the biological function of cathepsin X. Some studies point to a role in early tumorigenesis. A more recent study indicates that cathepsin X expression is restricted to immune cells suggesting a role in phagocytosis and the regulation of the immune response.
Probab=100.00 E-value=1.6e-50 Score=436.60 Aligned_cols=208 Identities=28% Similarity=0.589 Sum_probs=182.9
Q ss_pred CCCceecCCCC---CCCCCCCCC---CCchHHHHHHHHHHHHHHHHhcC---CceecCHHHHHhhcCCCCCCCCCCchHH
Q psy7460 742 VPDAWDWRKKN---VTGPAGDQA---ACGSCWAFSIAGMLEGQYAIKTG---KLVEFSKSQLVECAKQCSGCDGCFFEPS 812 (1026)
Q Consensus 742 lP~s~DwR~~g---~v~pv~dQg---~CGSCWAfa~~~ale~~~~i~~~---~~~~lS~Q~lvdC~~~~~gC~GG~~~~a 812 (1026)
||++||||+++ +|+|||||| .||||||||++++||+++.|+++ +.+.||+|+|+||+. +.||+||++..|
T Consensus 1 lP~~~Dwr~~~~~~~v~~vk~Qg~~~~CGsCwAfa~~~aies~~~i~~~~~~~~~~lS~Q~lldC~~-~~gC~GG~~~~a 79 (239)
T cd02698 1 LPKSWDWRNVNGVNYVSPTRNQHIPQYCGSCWAHGSTSALADRINIARKGAWPSVYLSVQVVIDCAG-GGSCHGGDPGGV 79 (239)
T ss_pred CCCCcccccCCCCcccCccccCCCCCCCCcchHHHhHHHHHHHHHHHHCCCCCCcccCHHHHHhCCC-CCCccCcCHHHH
Confidence 79999999988 999999998 89999999999999999999875 367899999999987 789999999999
Q ss_pred HHHHHHcCCCCCCcccCcCCCCCcccccCC----------C----CcceEEecceeeecChHHHHHHHHHhcCCEEEEEe
Q psy7460 813 IEYTHQAGLESEKDYPYKNANGEKFKCAYD----------K----SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 878 (1026)
Q Consensus 813 ~~y~~~~Gi~~e~~yPY~~~~~~~~~C~~~----------~----~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i~ 878 (1026)
++|++++|+++|++|||...+. .|... . .....+.+..|..+.++++||++|+++|||+++|+
T Consensus 80 ~~~~~~~Gl~~e~~yPY~~~~~---~C~~~~~~~~c~~~~~c~~~~~~~~~~i~~~~~~~~~~~i~~~l~~~GPV~v~i~ 156 (239)
T cd02698 80 YEYAHKHGIPDETCNPYQAKDG---ECNPFNRCGTCNPFGECFAIKNYTLYFVSDYGSVSGRDKMMAEIYARGPISCGIM 156 (239)
T ss_pred HHHHHHcCcCCCCeeCCcCCCC---CCcCCCCCCCcccCcccccccccceEEeeeceecCCHHHHHHHHHHcCCEEEEEE
Confidence 9999999999999999998765 34310 0 11234567778777889999999999999999999
Q ss_pred C-CCCcccCCcceeCCCCCCCCCCCCeEEEEEEeeecC-CccEEEEEcCCCCCCCCCcEEEEEecC-----CccccCCcc
Q psy7460 879 S-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-NIPYWLVRNSWGPIGPDEGFFKIERGN-----NACGIEQIA 951 (1026)
Q Consensus 879 ~-~~f~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyg~~~-g~~yWivkNSWG~~WGe~Gy~~i~r~~-----n~cGi~~~~ 951 (1026)
+ +.|+.|++|||... .| ...++|||+|||||+++ +++|||||||||++|||+|||||+|+. |.||||+.+
T Consensus 157 ~~~~f~~Y~~GIy~~~--~~-~~~~~HaV~IVGyG~~~~g~~YWiikNSWG~~WGe~Gy~~i~rg~~~~~~~~~~i~~~~ 233 (239)
T cd02698 157 ATEALENYTGGVYKEY--VQ-DPLINHIISVAGWGVDENGVEYWIVRNSWGEPWGERGWFRIVTSSYKGARYNLAIEEDC 233 (239)
T ss_pred ecccccccCCeEEccC--CC-CCcCCeEEEEEEEEecCCCCEEEEEEcCCCcccCcCceEEEEccCCcccccccccccce
Confidence 8 47999999999875 34 35689999999999886 999999999999999999999999999 999999999
Q ss_pred eEEEE
Q psy7460 952 GYATI 956 (1026)
Q Consensus 952 ~~~~~ 956 (1026)
+|+..
T Consensus 234 ~~~~~ 238 (239)
T cd02698 234 AWADP 238 (239)
T ss_pred EEEee
Confidence 98753
No 15
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access. Each subunit of the tetramer is composed of three peptides: the heavy and light chains, which together adopts the papain fold and forms the catalytic domain; and the residual propeptide region, which forms a beta barrel and points towards the substrate's N-terminus. The subunit composition is the result of the unique characteristic of procathepsin C maturation involving the cleavage of the catalytic domain and the non-autocatalytic excision of an activation peptide within its propeptide region. By removing N-terminal dipeptide extensions, cathepsin C activates granule serine peptidases (granzymes) involved in cell-mediated apoptosis, inflammation and tissue remodelling. Loss-of-function mutations in cathepsin C are assoc
Probab=100.00 E-value=1.5e-50 Score=438.60 Aligned_cols=210 Identities=32% Similarity=0.634 Sum_probs=180.9
Q ss_pred CCCceecCCCC----CCCCCCCCCCCchHHHHHHHHHHHHHHHHhcCC------ceecCHHHHHhhcCCCCCCCCCCchH
Q psy7460 742 VPDAWDWRKKN----VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK------LVEFSKSQLVECAKQCSGCDGCFFEP 811 (1026)
Q Consensus 742 lP~s~DwR~~g----~v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~~------~~~lS~Q~lvdC~~~~~gC~GG~~~~ 811 (1026)
||++||||+++ +|+||||||.||||||||++++||++++|++++ .+.||+|+|+||+..+.||+||.+..
T Consensus 1 lP~~fDwr~~~~~~~~v~~v~dQg~CGsCwAfa~~~~ies~~~i~~~~~~~~~~~~~lS~q~l~dC~~~~~GC~GG~~~~ 80 (243)
T cd02621 1 LPKSFDWGDVNNGFNYVSPVRNQGGCGSCYAFASVYALEARIMIASNKTDPLGQQPILSPQHVLSCSQYSQGCDGGFPFL 80 (243)
T ss_pred CCCcccccccCCCCcccccCCCCCcCccHHHHHHHHHHHHHHHHHhCCCCccccCcccCHHHhhhhcCCCCCCCCCCHHH
Confidence 79999999998 999999999999999999999999999998876 78999999999998788999999999
Q ss_pred HHHHHHHcCCCCCCcccCcC-CCCCcccccCCCCcceEEeccee------eecChHHHHHHHHHhcCCEEEEEeC-CCCc
Q psy7460 812 SIEYTHQAGLESEKDYPYKN-ANGEKFKCAYDKSKVKLFTGKDF------LHFNGSETMKKILYKYGPLSVLLNS-DLIH 883 (1026)
Q Consensus 812 a~~y~~~~Gi~~e~~yPY~~-~~~~~~~C~~~~~~~~~~~~~~~------~~~~~~~~ik~~l~~~GPV~v~i~~-~~f~ 883 (1026)
|++|+.+.|+++|++|||.. ... .|.........+.+..| ...+++++||++|+++|||+++|++ +.|+
T Consensus 81 a~~~~~~~Gi~~e~~yPY~~~~~~---~C~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ik~~i~~~GPv~v~~~~~~~F~ 157 (243)
T cd02621 81 VGKFAEDFGIVTEDYFPYTADDDR---PCKASPSECRRYYFSDYNYVGGCYGCTNEDEMKWEIYRNGPIVVAFEVYSDFD 157 (243)
T ss_pred HHHHHHhcCcCCCceeCCCCCCCC---CCCCCccccccccccceeEcccccccCCHHHHHHHHHHcCCEEEEEEeccccc
Confidence 99999999999999999998 455 78754411111222333 3346799999999999999999998 5799
Q ss_pred ccCCcceeCCC--CCCCC--------CCCCeEEEEEEeeecC--CccEEEEEcCCCCCCCCCcEEEEEecCCccccCCcc
Q psy7460 884 DYNGTPIRKND--ETCSP--------YDLGHAVLLVGYGKQD--NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 951 (1026)
Q Consensus 884 ~y~~Gi~~~~~--~~c~~--------~~~~HaV~iVGyg~~~--g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cGi~~~~ 951 (1026)
+|++|||.... ..|+. ..++|+|+|||||++. +.+|||||||||++|||+|||||+|+.|.|||++.+
T Consensus 158 ~Y~~GIy~~~~~~~~C~~~~~~~~~~~~~~HaV~iVGyg~~~~~g~~YWiirNSWG~~WGe~Gy~~i~~~~~~cgi~~~~ 237 (243)
T cd02621 158 FYKEGVYHHTDNDEVSDGDNDNFNPFELTNHAVLLVGWGEDEIKGEKYWIVKNSWGSSWGEKGYFKIRRGTNECGIESQA 237 (243)
T ss_pred ccCCeEECcCCcccccccccccccCcccCCeEEEEEEeeccCCCCCcEEEEEcCCCCCCCcCCeEEEecCCcccCcccce
Confidence 99999997652 12532 2579999999999886 899999999999999999999999999999999987
Q ss_pred eEE
Q psy7460 952 GYA 954 (1026)
Q Consensus 952 ~~~ 954 (1026)
.++
T Consensus 238 ~~~ 240 (243)
T cd02621 238 VFA 240 (243)
T ss_pred Eee
Confidence 765
No 16
>PTZ00049 cathepsin C-like protein; Provisional
Probab=100.00 E-value=5.1e-50 Score=468.17 Aligned_cols=217 Identities=27% Similarity=0.535 Sum_probs=181.4
Q ss_pred CCCCCCceeccCC----CCCCCCCCCCCCcchHHHHhHHHHHHHHHHHcCC-----C-----ccCCHHHHHhhhcCCCCC
Q psy7460 373 DGPVPDAWDWRKK----NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK-----L-----VEFSKSQLVECAKQCSGC 438 (1026)
Q Consensus 373 ~~~lP~~~DwR~~----~~vt~vk~Qg~CgSCwAfa~~~~~e~~~~i~~~~-----~-----~~lS~q~lvdC~~~~~gC 438 (1026)
..+||++||||++ ++++||+|||.||||||||++++||+|++|++++ . ..||+|+||||+..+.||
T Consensus 378 ~~~LP~sfDWRd~~~~~~~vtpVkdQG~CGSCWAFAat~alEsR~~Ia~~~~l~~~~~~~~~~~LS~QqLLDCs~~nqGC 457 (693)
T PTZ00049 378 IDELPKNFTWGDPFNNNTREYDVTNQLLCGSCYIASQMYAFKRRIEIALTKNLDKKYLNNFDDLLSIQTVLSCSFYDQGC 457 (693)
T ss_pred cccCCCCEecCcCCCCCCcccCCCCCccCcHHHHHHHHHHHHHHHHHHhccccccccccccccCcCHHHhcccCCCCCCc
Confidence 5689999999984 6799999999999999999999999999998743 2 279999999999878999
Q ss_pred CCCCCCc-hHHHHHHhCCcCCCCCCcccCCCCCccccccCCCC-------------------------------------
Q psy7460 439 GGCDGLE-QPIEYTHQAGLESEKDYPYRNGNGEKFKCAYDKSK------------------------------------- 480 (1026)
Q Consensus 439 ~G~~G~~-~a~~~~~~~Gi~~e~~ypY~~~~~~~~~C~~~~~~------------------------------------- 480 (1026)
+| |.+ .|++|+++.||++|++|||++..+ .|......
T Consensus 458 ~G--G~~~~A~kya~~~GI~tEscYPY~a~~g---~C~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (693)
T PTZ00049 458 NG--GFPYLVSKMAKLQGIPLDKVFPYTATEQ---TCPYQVDQSANSMNGSANLRQINAVFFSSETQSDMHADFEAPISS 532 (693)
T ss_pred CC--CcHHHHHHHHHHCCCCcCCccCCcCCCC---CCCCCCCCccccccccccccccccccccccccccccccccccccc
Confidence 99 999 999999999999999999998766 55432110
Q ss_pred -ceeeecceeEec---------CCHHHHHHHHHcCCCEEEEEecC-ccccccCCceeCCC----CCCCCC----------
Q psy7460 481 -VKLFTGKDFLYF---------NGSETMKKILYKYGPLSVGLNSH-LIHFYNGTPIRKND----ETCSPY---------- 535 (1026)
Q Consensus 481 -~~~~~~~~~~~~---------~~~~~~~~~l~~~gPv~v~i~~~-~~~~y~~Gi~~~~~----~~c~~~---------- 535 (1026)
...+...+|.++ .+++.||++|+++|||+|+|++. .|++|++|||...+ ..|...
T Consensus 533 ~~~r~y~k~y~yI~g~y~~~~~~~E~~Im~eI~~~GPVsVsIda~~dF~~YksGVY~~~~~~h~~~C~~d~~~~~~~~~~ 612 (693)
T PTZ00049 533 EPARWYAKDYNYIGGCYGCNQCNGEKIMMNEIYRNGPIVASFEASPDFYDYADGVYYVEDFPHARRCTVDLPKHNGVYNI 612 (693)
T ss_pred cccceeeeeeEEecccccccCCCCHHHHHHHHHhcCCEEEEEEechhhhcCCCccccCcccccccccCCccccccccccc
Confidence 011223455554 37899999999999999999995 79999999996321 136421
Q ss_pred ----CCCeEEEEEEeeec--CCc--cEEEEEcCCCCCCCCCcEEEEEecCCcccccceeeeeEEehh
Q psy7460 536 ----DLGHAVLLVGYGKQ--DDI--PYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVV 594 (1026)
Q Consensus 536 ----~~~HaV~iVGyG~~--~g~--~YWivkNSWG~~WGe~Gy~ri~r~~n~cgi~~~~~~~~~~~~ 594 (1026)
.+||||+|||||++ +|+ +|||||||||+.|||+|||||+||.|.|||++.+.|+.||+.
T Consensus 613 ~G~e~~NHAVlIVGwG~d~enG~~~~YWIVRNSWGt~WGenGYfKI~RG~N~CGIEs~a~~~~pd~~ 679 (693)
T PTZ00049 613 TGWEKVNHAIVLVGWGEEEINGKLYKYWIGRNSWGKNWGKEGYFKIIRGKNFSGIESQSLFIEPDFS 679 (693)
T ss_pred cccccCceEEEEEEeccccCCCcccCEEEEECCCCCCcccCceEEEEcCCCccCCccceeEEeeecc
Confidence 46999999999975 464 899999999999999999999999999999999999999853
No 17
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an exopeptidase through its carboxydipeptidyl activity. Together with other cathepsins, it is involved in the degradation of proteins, proenzyme activation, Ag processing, metabolism and apoptosis. Cathepsin B has been implicated in a number of human diseases such as cancer, rheumatoid arthritis, osteoporosis and Alzheimer's disease. The unique carboxydipeptidyl activity of cathepsin B is attributed to the presence of an occluding loop in its active site which favors the binding of the C-termini of substrate proteins. Some members of this group do not possess the occluding loop. TIN-Ag is an extracellular matrix basement protein which was originally identified as a target Ag involved in anti-tubular basement membrane
Probab=100.00 E-value=1.2e-49 Score=428.96 Aligned_cols=207 Identities=29% Similarity=0.575 Sum_probs=176.1
Q ss_pred CCceecCCC--CC--CCCCCCCCCCchHHHHHHHHHHHHHHHHhcC--CceecCHHHHHhhcCC-CCCCCCCCchHHHHH
Q psy7460 743 PDAWDWRKK--NV--TGPAGDQAACGSCWAFSIAGMLEGQYAIKTG--KLVEFSKSQLVECAKQ-CSGCDGCFFEPSIEY 815 (1026)
Q Consensus 743 P~s~DwR~~--g~--v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~--~~~~lS~Q~lvdC~~~-~~gC~GG~~~~a~~y 815 (1026)
|++||||++ ++ |+||+|||.||||||||++++||+++.|+++ +.+.||+|+|+||+.. +.||+||++..||+|
T Consensus 1 p~~~DwR~~~~~~~~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~~~LS~Q~lidC~~~~~~gC~GG~~~~a~~~ 80 (236)
T cd02620 1 PESFDAREKWPNCISIGEIRDQGNCGSCWAFSAVEAFSDRLCIQSNGKENVLLSAQDLLSCCSGCGDGCNGGYPDAAWKY 80 (236)
T ss_pred CCcccchhhCCCCCCccccCCcccchhHHHHHHHHHHhhHHHHhcCCCCccccCHHHHHhhcCCCCCCCCCCCHHHHHHH
Confidence 899999997 44 4599999999999999999999999999887 7899999999999976 789999999999999
Q ss_pred HHHcCCCCCCcccCcCCCCCc---------------ccccCCCC---cceEEecceeeec-ChHHHHHHHHHhcCCEEEE
Q psy7460 816 THQAGLESEKDYPYKNANGEK---------------FKCAYDKS---KVKLFTGKDFLHF-NGSETMKKILYKYGPLSVL 876 (1026)
Q Consensus 816 ~~~~Gi~~e~~yPY~~~~~~~---------------~~C~~~~~---~~~~~~~~~~~~~-~~~~~ik~~l~~~GPV~v~ 876 (1026)
++++|+++|++|||.+.+... ..|..... ....+++..+..+ .++++||++|+++|||+++
T Consensus 81 i~~~G~~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPv~v~ 160 (236)
T cd02620 81 LTTTGVVTGGCQPYTIPPCGHHPEGPPPCCGTPYCTPKCQDGCEKTYEEDKHKGKSAYSVPSDETDIMKEIMTNGPVQAA 160 (236)
T ss_pred HHhcCCCcCCEecCcCCCCccCCCCCCCCCCCCCCCCCCCcCCccccceeeeeecceeeeCCHHHHHHHHHHHCCCeEEE
Confidence 999999999999998865421 13443221 1112233343333 4689999999999999999
Q ss_pred EeC-CCCcccCCcceeCCCCCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCcEEEEEecCCccccCCcce
Q psy7460 877 LNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 952 (1026)
Q Consensus 877 i~~-~~f~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cGi~~~~~ 952 (1026)
|++ +.|+.|++|||... |+...++|||+|||||++++.+|||||||||+.|||+|||||+|+.|.|||++.++
T Consensus 161 i~~~~~f~~Y~~Giy~~~---~~~~~~~HaV~iVGyg~~~g~~YWivrNSWG~~WGe~Gy~ri~~~~~~cgi~~~~~ 234 (236)
T cd02620 161 FTVYEDFLYYKSGVYQHT---SGKQLGGHAVKIIGWGVENGVPYWLAANSWGTDWGENGYFRILRGSNECGIESEVV 234 (236)
T ss_pred EEechhhhhcCCcEEeec---CCCCcCCeEEEEEEEeccCCeeEEEEEeCCCCCCCCCcEEEEEccCccccccccee
Confidence 998 68999999999764 55566899999999999999999999999999999999999999999999998765
No 18
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional
Probab=100.00 E-value=1.1e-48 Score=454.38 Aligned_cols=216 Identities=21% Similarity=0.459 Sum_probs=178.7
Q ss_pred CCCCCCceeccCCC---CCCCCCCCCC---CcchHHHHhHHHHHHHHHHHcC------CCccCCHHHHHhhhcCCCCCCC
Q psy7460 373 DGPVPDAWDWRKKN---VTGPAGDQAA---CGSCWAFSIAGMLEGQYAIKTG------KLVEFSKSQLVECAKQCSGCGG 440 (1026)
Q Consensus 373 ~~~lP~~~DwR~~~---~vt~vk~Qg~---CgSCwAfa~~~~~e~~~~i~~~------~~~~lS~q~lvdC~~~~~gC~G 440 (1026)
..+||++||||+++ +|+||||||. ||||||||++++||++++|+++ ..+.||+|+||||+..+.||+|
T Consensus 202 ~~~LP~sfDWR~~gg~~~VtpVrdQg~~~~CGSCWAFAav~alEsr~~I~tn~~~~~g~~~~LS~QqLVDCs~~n~GCdG 281 (548)
T PTZ00364 202 GDPPPAAWSWGDVGGASFLPAAPPASPGRGCNSSYVEAALAAMMARVMVASNRTDPLGQQTFLSARHVLDCSQYGQGCAG 281 (548)
T ss_pred ccCCCCccccCcCCCCccCCCCcCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcccCcccCcCHHHHhcccCCCCCCCC
Confidence 35799999999987 7899999999 9999999999999999999983 4689999999999977889999
Q ss_pred CCCCc-hHHHHHHhCCcCCCCCC--cccCCCCCccccccCCCCceee-----eccee-EecCCHHHHHHHHHcCCCEEEE
Q psy7460 441 CDGLE-QPIEYTHQAGLESEKDY--PYRNGNGEKFKCAYDKSKVKLF-----TGKDF-LYFNGSETMKKILYKYGPLSVG 511 (1026)
Q Consensus 441 ~~G~~-~a~~~~~~~Gi~~e~~y--pY~~~~~~~~~C~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~l~~~gPv~v~ 511 (1026)
|++ .|++|++++||++|++| ||.+.++....|.......+.+ .+.+| ..+.++++||++|+++|||+|+
T Consensus 282 --G~p~~A~~yi~~~GI~tE~dY~~PY~~~dg~~~~Ck~~~~~~~y~~~~~~~I~gyy~~~~~e~~I~~eI~~~GPVsVa 359 (548)
T PTZ00364 282 --GFPEEVGKFAETFGILTTDSYYIPYDSGDGVERACKTRRPSRRYYFTNYGPLGGYYGAVTDPDEIIWEIYRHGPVPAS 359 (548)
T ss_pred --CcHHHHHHHHHhCCcccccccCCCCCCCCCCCCCCCCCcccceeeeeeeEEecceeecCCcHHHHHHHHHHcCCeEEE
Confidence 999 99999999999999999 9988765333587544332211 12222 2345788999999999999999
Q ss_pred EecC-ccccccCCceeC-----CCC-CCC----------CCCCCeEEEEEEeee-cCCccEEEEEcCCCC--CCCCCcEE
Q psy7460 512 LNSH-LIHFYNGTPIRK-----NDE-TCS----------PYDLGHAVLLVGYGK-QDDIPYWLARNSWGP--IGPDEGFF 571 (1026)
Q Consensus 512 i~~~-~~~~y~~Gi~~~-----~~~-~c~----------~~~~~HaV~iVGyG~-~~g~~YWivkNSWG~--~WGe~Gy~ 571 (1026)
|++. .|++|++|||.. .+. .|. ...+||||+|||||+ ++|++|||||||||+ +|||+|||
T Consensus 360 Ida~~df~~YksGiy~gi~~~~~~~~~~~~~~~~~~~~~~~~~nHAVlIVGYG~de~G~~YWIVKNSWGt~~~WGE~GYf 439 (548)
T PTZ00364 360 VYANSDWYNCDENSTEDVRYVSLDDYSTASADRPLRHYFASNVNHTVLIIGWGTDENGGDYWLVLDPWGSRRSWCDGGTR 439 (548)
T ss_pred EEechHHHhcCCCCccCeeccccccccccccCCcccccccccCCeEEEEEEecccCCCceEEEEECCCCCCCCcccCCeE
Confidence 9995 788999998741 111 121 235799999999997 478999999999999 99999999
Q ss_pred EEEecCCcccccceeeeeE
Q psy7460 572 KIERGNNACGIEQIAGYAT 590 (1026)
Q Consensus 572 ri~r~~n~cgi~~~~~~~~ 590 (1026)
||+||.|.||||+.+....
T Consensus 440 RI~RG~N~CGIes~~v~~~ 458 (548)
T PTZ00364 440 KIARGVNAYNIESEVVVMY 458 (548)
T ss_pred EEEcCCCcccccceeeeee
Confidence 9999999999999887433
No 19
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W). Papain is an endopeptidase with specific substrate preferences, primarily for bulky hydrophobic or aromatic residues at the S2 subsite, a hydrophobic pocket in papain that accommodates the P2 sidechain of the substrate (the second residue away from the scissile bond). Most members of the papain subfamily are endopeptidases. Some exceptions to this rule can be explained by specific details of the catalytic domains like the occluding loop in cathepsin B which confers an additional carboxydipeptidyl activity and the mini-chain of cathepsin H resulting in an N-terminal exopeptidase activity. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds. Parasitic CPs act extracellularly to help invade tissues and cells, to h
Probab=100.00 E-value=1.9e-48 Score=413.90 Aligned_cols=205 Identities=45% Similarity=0.912 Sum_probs=183.9
Q ss_pred CCceeccCCCCCCCCCCCCCCcchHHHHhHHHHHHHHHHHcCCCccCCHHHHHhhhcC-CCCCCCCCCCc-hHHHHHHhC
Q psy7460 377 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ-CSGCGGCDGLE-QPIEYTHQA 454 (1026)
Q Consensus 377 P~~~DwR~~~~vt~vk~Qg~CgSCwAfa~~~~~e~~~~i~~~~~~~lS~q~lvdC~~~-~~gC~G~~G~~-~a~~~~~~~ 454 (1026)
|++||||+.+.++||+|||.||||||||++++||++++|+++..+.||+|+|++|... +.||.| |.+ .|+++++..
T Consensus 1 P~~~d~r~~~~~~~v~dQg~cgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~gC~G--G~~~~a~~~~~~~ 78 (210)
T cd02248 1 PESVDWREKGAVTPVKDQGSCGSCWAFSTVGALEGAYAIKTGKLVSLSEQQLVDCSTSGNNGCNG--GNPDNAFEYVKNG 78 (210)
T ss_pred CCcccCCcCCCCCCCccCCCCcchHHhHHHHHHHHHHHHHcCCCcccCHHHHhccCCCCCCCCCC--CCHHHhHHHHHHC
Confidence 8899999999999999999999999999999999999999999999999999999976 789999 998 999999999
Q ss_pred CcCCCCCCcccCCCCCccccccCCCCceeeecceeEecC--CHHHHHHHHHcCCCEEEEEecC-ccccccCCceeCCCCC
Q psy7460 455 GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFN--GSETMKKILYKYGPLSVGLNSH-LIHFYNGTPIRKNDET 531 (1026)
Q Consensus 455 Gi~~e~~ypY~~~~~~~~~C~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gPv~v~i~~~-~~~~y~~Gi~~~~~~~ 531 (1026)
|+++|++|||..... .|....... .+++..|..+. ++++||++|+++|||+++|.+. .|+.|++|||.. ..
T Consensus 79 Gi~~e~~yPY~~~~~---~C~~~~~~~-~~~i~~~~~i~~~~~~~ik~~l~~~gPV~~~~~~~~~f~~y~~Giy~~--~~ 152 (210)
T cd02248 79 GLASESDYPYTGKDG---TCKYNSSKV-GAKITGYSNVPPGDEEALKAALANYGPVSVAIDASSSFQFYKGGIYSG--PC 152 (210)
T ss_pred CcCccccCCccCCCC---CccCCCCcc-cEEEeeEEEcCCCcHHHHHHHHhhcCCEEEEEecCcccccCCCCceeC--CC
Confidence 999999999998666 787654423 34667887775 4899999999999999999995 799999999953 34
Q ss_pred CCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCcEEEEEecCCcccccceeeee
Q psy7460 532 CSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 589 (1026)
Q Consensus 532 c~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~Gy~ri~r~~n~cgi~~~~~~~ 589 (1026)
|.....+|||+|||||++.+++|||||||||+.||++|||||+|+.|.|||++.+.||
T Consensus 153 ~~~~~~~Hav~iVGy~~~~~~~ywiv~NSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~~ 210 (210)
T cd02248 153 CSNTNLNHAVLLVGYGTENGVDYWIVKNSWGTSWGEKGYIRIARGSNLCGIASYASYP 210 (210)
T ss_pred CCCCcCCEEEEEEEEeecCCceEEEEEcCCCCccccCcEEEEEcCCCccCceeeeecC
Confidence 4345679999999999998999999999999999999999999999999999888775
No 20
>PTZ00049 cathepsin C-like protein; Provisional
Probab=100.00 E-value=1.6e-48 Score=455.67 Aligned_cols=220 Identities=27% Similarity=0.516 Sum_probs=184.2
Q ss_pred CCCCCCCceecCCC----CCCCCCCCCCCCchHHHHHHHHHHHHHHHHhcCC-----c-----eecCHHHHHhhcCCCCC
Q psy7460 738 KDGPVPDAWDWRKK----NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGK-----L-----VEFSKSQLVECAKQCSG 803 (1026)
Q Consensus 738 ~~~~lP~s~DwR~~----g~v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~~-----~-----~~lS~Q~lvdC~~~~~g 803 (1026)
....||++||||+. ++++||+|||.||||||||++++||++++|++++ . ..||+|+||||+..++|
T Consensus 377 ~~~~LP~sfDWRd~~~~~~~vtpVkdQG~CGSCWAFAat~alEsR~~Ia~~~~l~~~~~~~~~~~LS~QqLLDCs~~nqG 456 (693)
T PTZ00049 377 EIDELPKNFTWGDPFNNNTREYDVTNQLLCGSCYIASQMYAFKRRIEIALTKNLDKKYLNNFDDLLSIQTVLSCSFYDQG 456 (693)
T ss_pred ccccCCCCEecCcCCCCCCcccCCCCCccCcHHHHHHHHHHHHHHHHHHhccccccccccccccCcCHHHhcccCCCCCC
Confidence 35689999999985 6799999999999999999999999999998643 2 27999999999988899
Q ss_pred CCCCCchHHHHHHHHcCCCCCCcccCcCCCCCcccccCCCCc--------------------------------------
Q psy7460 804 CDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-------------------------------------- 845 (1026)
Q Consensus 804 C~GG~~~~a~~y~~~~Gi~~e~~yPY~~~~~~~~~C~~~~~~-------------------------------------- 845 (1026)
|+||.+..|++|+++.||++|++|||.+..+ .|+.....
T Consensus 457 C~GG~~~~A~kya~~~GI~tEscYPY~a~~g---~C~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (693)
T PTZ00049 457 CNGGFPYLVSKMAKLQGIPLDKVFPYTATEQ---TCPYQVDQSANSMNGSANLRQINAVFFSSETQSDMHADFEAPISSE 533 (693)
T ss_pred cCCCcHHHHHHHHHHCCCCcCCccCCcCCCC---CCCCCCCCcccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999998766 56432110
Q ss_pred ceEEecceeeec---------ChHHHHHHHHHhcCCEEEEEeCC-CCcccCCcceeCCC----CCCCC------------
Q psy7460 846 VKLFTGKDFLHF---------NGSETMKKILYKYGPLSVLLNSD-LIHDYNGTPIRKND----ETCSP------------ 899 (1026)
Q Consensus 846 ~~~~~~~~~~~~---------~~~~~ik~~l~~~GPV~v~i~~~-~f~~y~~Gi~~~~~----~~c~~------------ 899 (1026)
...+..+.|..+ ++++.||++|+++|||+|+|++. .|++|++|||..++ ..|..
T Consensus 534 ~~r~y~k~y~yI~g~y~~~~~~~E~~Im~eI~~~GPVsVsIda~~dF~~YksGVY~~~~~~h~~~C~~d~~~~~~~~~~~ 613 (693)
T PTZ00049 534 PARWYAKDYNYIGGCYGCNQCNGEKIMMNEIYRNGPIVASFEASPDFYDYADGVYYVEDFPHARRCTVDLPKHNGVYNIT 613 (693)
T ss_pred ccceeeeeeEEecccccccCCCCHHHHHHHHHhcCCEEEEEEechhhhcCCCccccCcccccccccCCcccccccccccc
Confidence 011233444443 36899999999999999999984 79999999998532 13632
Q ss_pred --CCCCeEEEEEEeeec--CCc--cEEEEEcCCCCCCCCCcEEEEEecCCccccCCcceEEEEeecC
Q psy7460 900 --YDLGHAVLLVGYGKQ--DNI--PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVVK 960 (1026)
Q Consensus 900 --~~~~HaV~iVGyg~~--~g~--~yWivkNSWG~~WGe~Gy~~i~r~~n~cGi~~~~~~~~~~~~~ 960 (1026)
..++|||+|||||++ +|. +|||||||||+.|||+|||||+|+.|.|||++.+.|+..++.+
T Consensus 614 G~e~~NHAVlIVGwG~d~enG~~~~YWIVRNSWGt~WGenGYfKI~RG~N~CGIEs~a~~~~pd~~r 680 (693)
T PTZ00049 614 GWEKVNHAIVLVGWGEEEINGKLYKYWIGRNSWGKNWGKEGYFKIIRGKNFSGIESQSLFIEPDFSR 680 (693)
T ss_pred ccccCceEEEEEEeccccCCCcccCEEEEECCCCCCcccCceEEEEcCCCccCCccceeEEeeeccc
Confidence 247999999999975 463 7999999999999999999999999999999999999988764
No 21
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W). Papain is an endopeptidase with specific substrate preferences, primarily for bulky hydrophobic or aromatic residues at the S2 subsite, a hydrophobic pocket in papain that accommodates the P2 sidechain of the substrate (the second residue away from the scissile bond). Most members of the papain subfamily are endopeptidases. Some exceptions to this rule can be explained by specific details of the catalytic domains like the occluding loop in cathepsin B which confers an additional carboxydipeptidyl activity and the mini-chain of cathepsin H resulting in an N-terminal exopeptidase activity. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds. Parasitic CPs act extracellularly to help invade tissues and cells, to h
Probab=100.00 E-value=5.1e-48 Score=410.57 Aligned_cols=206 Identities=44% Similarity=0.866 Sum_probs=185.6
Q ss_pred CCceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHhcCCceecCHHHHHhhcCC-CCCCCCCCchHHHHHHHHcCC
Q psy7460 743 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ-CSGCDGCFFEPSIEYTHQAGL 821 (1026)
Q Consensus 743 P~s~DwR~~g~v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~~~~~lS~Q~lvdC~~~-~~gC~GG~~~~a~~y~~~~Gi 821 (1026)
|++||||+.+.++||+|||.||||||||++++||++++++++..+.||+|+|++|... +.||.||.+..|++++++.|+
T Consensus 1 P~~~d~r~~~~~~~v~dQg~cgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~Gi 80 (210)
T cd02248 1 PESVDWREKGAVTPVKDQGSCGSCWAFSTVGALEGAYAIKTGKLVSLSEQQLVDCSTSGNNGCNGGNPDNAFEYVKNGGL 80 (210)
T ss_pred CCcccCCcCCCCCCCccCCCCcchHHhHHHHHHHHHHHHHcCCCcccCHHHHhccCCCCCCCCCCCCHHHhHHHHHHCCc
Confidence 7899999999999999999999999999999999999999998999999999999976 789999999999999999999
Q ss_pred CCCCcccCcCCCCCcccccCCCCcceEEecceeeecCh--HHHHHHHHHhcCCEEEEEeCC-CCcccCCcceeCCCCCCC
Q psy7460 822 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETMKKILYKYGPLSVLLNSD-LIHDYNGTPIRKNDETCS 898 (1026)
Q Consensus 822 ~~e~~yPY~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~--~~~ik~~l~~~GPV~v~i~~~-~f~~y~~Gi~~~~~~~c~ 898 (1026)
++|++|||..... .|..... ...+++..|..+.. .++||++|+++|||++++.+. .|+.|++|||..+ .|.
T Consensus 81 ~~e~~yPY~~~~~---~C~~~~~-~~~~~i~~~~~i~~~~~~~ik~~l~~~gPV~~~~~~~~~f~~y~~Giy~~~--~~~ 154 (210)
T cd02248 81 ASESDYPYTGKDG---TCKYNSS-KVGAKITGYSNVPPGDEEALKAALANYGPVSVAIDASSSFQFYKGGIYSGP--CCS 154 (210)
T ss_pred CccccCCccCCCC---CccCCCC-cccEEEeeEEEcCCCcHHHHHHHHhhcCCEEEEEecCcccccCCCCceeCC--CCC
Confidence 9999999998666 7876543 33457778877653 799999999999999999984 7999999999876 343
Q ss_pred CCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCcEEEEEecCCccccCCcceEE
Q psy7460 899 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 954 (1026)
Q Consensus 899 ~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cGi~~~~~~~ 954 (1026)
...++|||+|||||++.+.+|||||||||+.||++|||||+|++|.|||++.+.||
T Consensus 155 ~~~~~Hav~iVGy~~~~~~~ywiv~NSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~~ 210 (210)
T cd02248 155 NTNLNHAVLLVGYGTENGVDYWIVKNSWGTSWGEKGYIRIARGSNLCGIASYASYP 210 (210)
T ss_pred CCcCCEEEEEEEEeecCCceEEEEEcCCCCccccCcEEEEEcCCCccCceeeeecC
Confidence 56789999999999998999999999999999999999999999999999776654
No 22
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional
Probab=100.00 E-value=8.3e-48 Score=447.13 Aligned_cols=218 Identities=21% Similarity=0.429 Sum_probs=181.6
Q ss_pred CCCCCCceecCCCC---CCCCCCCCCC---CchHHHHHHHHHHHHHHHHhcC------CceecCHHHHHhhcCCCCCCCC
Q psy7460 739 DGPVPDAWDWRKKN---VTGPAGDQAA---CGSCWAFSIAGMLEGQYAIKTG------KLVEFSKSQLVECAKQCSGCDG 806 (1026)
Q Consensus 739 ~~~lP~s~DwR~~g---~v~pv~dQg~---CGSCWAfa~~~ale~~~~i~~~------~~~~lS~Q~lvdC~~~~~gC~G 806 (1026)
..+||++||||++| +|+||||||. ||||||||++++||++++|+++ +.+.||+|+||||+..++||+|
T Consensus 202 ~~~LP~sfDWR~~gg~~~VtpVrdQg~~~~CGSCWAFAav~alEsr~~I~tn~~~~~g~~~~LS~QqLVDCs~~n~GCdG 281 (548)
T PTZ00364 202 GDPPPAAWSWGDVGGASFLPAAPPASPGRGCNSSYVEAALAAMMARVMVASNRTDPLGQQTFLSARHVLDCSQYGQGCAG 281 (548)
T ss_pred ccCCCCccccCcCCCCccCCCCcCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcccCcccCcCHHHHhcccCCCCCCCC
Confidence 46899999999997 7999999999 9999999999999999999873 4688999999999987899999
Q ss_pred CCchHHHHHHHHcCCCCCCcc--cCcCCCCCcccccCCCCcceE-----Eecceee-ecChHHHHHHHHHhcCCEEEEEe
Q psy7460 807 CFFEPSIEYTHQAGLESEKDY--PYKNANGEKFKCAYDKSKVKL-----FTGKDFL-HFNGSETMKKILYKYGPLSVLLN 878 (1026)
Q Consensus 807 G~~~~a~~y~~~~Gi~~e~~y--PY~~~~~~~~~C~~~~~~~~~-----~~~~~~~-~~~~~~~ik~~l~~~GPV~v~i~ 878 (1026)
|++..|++|++++||++|++| ||.+.++....|.......+. ..+.+|. ..+++++||++|+++|||+|+|+
T Consensus 282 G~p~~A~~yi~~~GI~tE~dY~~PY~~~dg~~~~Ck~~~~~~~y~~~~~~~I~gyy~~~~~e~~I~~eI~~~GPVsVaId 361 (548)
T PTZ00364 282 GFPEEVGKFAETFGILTTDSYYIPYDSGDGVERACKTRRPSRRYYFTNYGPLGGYYGAVTDPDEIIWEIYRHGPVPASVY 361 (548)
T ss_pred CcHHHHHHHHHhCCcccccccCCCCCCCCCCCCCCCCCcccceeeeeeeEEecceeecCCcHHHHHHHHHHcCCeEEEEE
Confidence 999999999999999999999 999876643458754433221 1122232 23578899999999999999999
Q ss_pred C-CCCcccCCcceeCC-----C-CCC---C-------CCCCCeEEEEEEeee-cCCccEEEEEcCCCC--CCCCCcEEEE
Q psy7460 879 S-DLIHDYNGTPIRKN-----D-ETC---S-------PYDLGHAVLLVGYGK-QDNIPYWLVRNSWGP--IGPDEGFFKI 938 (1026)
Q Consensus 879 ~-~~f~~y~~Gi~~~~-----~-~~c---~-------~~~~~HaV~iVGyg~-~~g~~yWivkNSWG~--~WGe~Gy~~i 938 (1026)
+ +.|+.|++|||.+. + ..| + ...+||||+|||||+ ++|.+|||||||||+ +|||+|||||
T Consensus 362 a~~df~~YksGiy~gi~~~~~~~~~~~~~~~~~~~~~~~~~nHAVlIVGYG~de~G~~YWIVKNSWGt~~~WGE~GYfRI 441 (548)
T PTZ00364 362 ANSDWYNCDENSTEDVRYVSLDDYSTASADRPLRHYFASNVNHTVLIIGWGTDENGGDYWLVLDPWGSRRSWCDGGTRKI 441 (548)
T ss_pred echHHHhcCCCCccCeeccccccccccccCCcccccccccCCeEEEEEEecccCCCceEEEEECCCCCCCCcccCCeEEE
Confidence 8 47889999998521 1 011 1 235799999999997 478999999999999 9999999999
Q ss_pred EecCCccccCCcceEEEE
Q psy7460 939 ERGNNACGIEQIAGYATI 956 (1026)
Q Consensus 939 ~r~~n~cGi~~~~~~~~~ 956 (1026)
+||.|.|||++.++....
T Consensus 442 ~RG~N~CGIes~~v~~~~ 459 (548)
T PTZ00364 442 ARGVNAYNIESEVVVMYW 459 (548)
T ss_pred EcCCCcccccceeeeeee
Confidence 999999999999885544
No 23
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification. ; InterPro: IPR000668 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of proteins belong to the peptidase family C1, sub-family C1A (papain family, clan CA). It includes proteins classed as non-peptidase homologs. These are have either been shown experimentally to lack peptidase activity or lack one or more of the active site residues. The papain family has a wide variety of activities, including broad-range (papain) and narrow-range endo-peptidases, aminopeptidases, dipeptidyl peptidases and enzymes with both exo- and endo-peptidase activity []. Members of the papain family are widespread, found in baculovirus [], eubacteria, yeast, and practically all protozoa, plants and mammals []. The proteins are typically lysosomal or secreted, and proteolytic cleavage of the propeptide is required for enzyme activation, although bleomycin hydrolase is cytosolic in fungi and mammals []. Papain-like cysteine proteinases are essentially synthesised as inactive proenzymes (zymogens) with N-terminal propeptide regions. The activation process of these enzymes includes the removal of propeptide regions. The propeptide regions serve a variety of functions in vivo and in vitro. The pro-region is required for the proper folding of the newly synthesised enzyme, the inactivation of the peptidase domain and stabilisation of the enzyme against denaturing at neutral to alkaline pH conditions. Amino acid residues within the pro-region mediate their membrane association, and play a role in the transport of the proenzyme to lysosomes. Among the most notable features of propeptides is their ability to inhibit the activity of their cognate enzymes and that certain propeptides exhibit high selectivity for inhibition of the peptidases from which they originate []. The catalytic residues of papain are Cys-25 and His-159, other important residues being Gln-19, which helps form the 'oxyanion hole', and Asn-175, which orientates the imidazole ring of His-159. ; GO: 0008234 cysteine-type peptidase activity, 0006508 proteolysis; PDB: 3MOR_B 3HHI_B 1S4V_A 3F75_A 1MEG_A 1PCI_C 1PPO_A 3HD3_B 1F29_A 1EWL_A ....
Probab=100.00 E-value=2.2e-46 Score=400.32 Aligned_cols=208 Identities=37% Similarity=0.741 Sum_probs=179.1
Q ss_pred CCCceeccCC-CCCCCCCCCCCCcchHHHHhHHHHHHHHHHHc-CCCccCCHHHHHhhhc-CCCCCCCCCCCc-hHHHHH
Q psy7460 376 VPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKT-GKLVEFSKSQLVECAK-QCSGCGGCDGLE-QPIEYT 451 (1026)
Q Consensus 376 lP~~~DwR~~-~~vt~vk~Qg~CgSCwAfa~~~~~e~~~~i~~-~~~~~lS~q~lvdC~~-~~~gC~G~~G~~-~a~~~~ 451 (1026)
||++||||+. +.++||+||+.||||||||+++++|+++++++ ...+.||+|+|++|.. .+.+|.| |.+ .|++++
T Consensus 1 lP~~~D~r~~~~~~~~v~dQg~~gsCwafa~~~~~e~~~~~~~~~~~~~lS~q~l~~~~~~~~~~c~g--g~~~~a~~~~ 78 (219)
T PF00112_consen 1 LPKSFDWRDKGGRITPVRDQGSCGSCWAFAAAAALESRLAIQNNGKNVDLSEQYLIDCSNKYNKGCDG--GSPFDALKYI 78 (219)
T ss_dssp STSSEEGGGTTTCSG---BTTSSBTHHHHHHHHHHHHHHHHHHTSSCEEB-HHHHHHHSTGTSSTTBB--BEHHHHHHHH
T ss_pred CCCCEecccCCCCcCccccCCcccccccchhccceecccccccccccccccccccccccccccccccc--Ccccccceee
Confidence 7999999998 48999999999999999999999999999999 7889999999999997 5689999 888 999999
Q ss_pred Hh-CCcCCCCCCcccCCC-CCccccccCCCCceeeecceeEecC--CHHHHHHHHHcCCCEEEEEecC--ccccccCCce
Q psy7460 452 HQ-AGLESEKDYPYRNGN-GEKFKCAYDKSKVKLFTGKDFLYFN--GSETMKKILYKYGPLSVGLNSH--LIHFYNGTPI 525 (1026)
Q Consensus 452 ~~-~Gi~~e~~ypY~~~~-~~~~~C~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gPv~v~i~~~--~~~~y~~Gi~ 525 (1026)
.+ .|+++|++|||...+ . .|.........+.+..|..+. ++++||++|+++|||+++|.+. .|+.|++|||
T Consensus 79 ~~~~Gi~~e~~~pY~~~~~~---~c~~~~~~~~~~~i~~~~~~~~~~~~~ik~~L~~~gpV~~~~~~~~~~f~~~~~gi~ 155 (219)
T PF00112_consen 79 KNNNGIVTEEDYPYNGNENP---TCKSKKSNSYYVKIKGYGKVKDNDIEDIKKALMKYGPVVASIDVSSEDFQNYKSGIY 155 (219)
T ss_dssp HHHTSBEBTTTS--SSSSSC---SSCHSGGGEEEBEESEEEEEESTCHHHHHHHHHHHSSEEEEEEEESHHHHTEESSEE
T ss_pred cccCcccccccccccccccc---cccccccccccccccccccccccchhHHHHHHhhCceeeeeeeccccccccccceee
Confidence 88 999999999999876 4 787664443334667777665 5899999999999999999984 3999999999
Q ss_pred eCCCCCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCcEEEEEecCC-cccccceeeeeE
Q psy7460 526 RKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARNSWGPIGPDEGFFKIERGNN-ACGIEQIAGYAT 590 (1026)
Q Consensus 526 ~~~~~~c~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~Gy~ri~r~~n-~cgi~~~~~~~~ 590 (1026)
.. ..|.+...+|||+|||||++.+++|||||||||+.||++|||||.|+.| +|||++++.||+
T Consensus 156 ~~--~~~~~~~~~Hav~iVGy~~~~~~~~wiv~NSWG~~WG~~Gy~~i~~~~~~~c~i~~~~~~~~ 219 (219)
T PF00112_consen 156 DP--PDCSNESGGHAVLIVGYDDENGKGYWIVKNSWGTDWGDNGYFRISYDYNNECGIESQAVYPI 219 (219)
T ss_dssp CS--TSSSSSSEEEEEEEEEEEEETTEEEEEEE-SBTTTSTBTTEEEEESSSSSGGGTTSSEEEEE
T ss_pred ec--cccccccccccccccccccccceeeEeeehhhCCccCCCeEEEEeeCCCCcCccCceeeecC
Confidence 53 3577667899999999999999999999999999999999999999987 999999999995
No 24
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification. ; InterPro: IPR000668 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of proteins belong to the peptidase family C1, sub-family C1A (papain family, clan CA). It includes proteins classed as non-peptidase homologs. These are have either been shown experimentally to lack peptidase activity or lack one or more of the active site residues. The papain family has a wide variety of activities, including broad-range (papain) and narrow-range endo-peptidases, aminopeptidases, dipeptidyl peptidases and enzymes with both exo- and endo-peptidase activity []. Members of the papain family are widespread, found in baculovirus [], eubacteria, yeast, and practically all protozoa, plants and mammals []. The proteins are typically lysosomal or secreted, and proteolytic cleavage of the propeptide is required for enzyme activation, although bleomycin hydrolase is cytosolic in fungi and mammals []. Papain-like cysteine proteinases are essentially synthesised as inactive proenzymes (zymogens) with N-terminal propeptide regions. The activation process of these enzymes includes the removal of propeptide regions. The propeptide regions serve a variety of functions in vivo and in vitro. The pro-region is required for the proper folding of the newly synthesised enzyme, the inactivation of the peptidase domain and stabilisation of the enzyme against denaturing at neutral to alkaline pH conditions. Amino acid residues within the pro-region mediate their membrane association, and play a role in the transport of the proenzyme to lysosomes. Among the most notable features of propeptides is their ability to inhibit the activity of their cognate enzymes and that certain propeptides exhibit high selectivity for inhibition of the peptidases from which they originate []. The catalytic residues of papain are Cys-25 and His-159, other important residues being Gln-19, which helps form the 'oxyanion hole', and Asn-175, which orientates the imidazole ring of His-159. ; GO: 0008234 cysteine-type peptidase activity, 0006508 proteolysis; PDB: 3MOR_B 3HHI_B 1S4V_A 3F75_A 1MEG_A 1PCI_C 1PPO_A 3HD3_B 1F29_A 1EWL_A ....
Probab=100.00 E-value=3.6e-46 Score=398.57 Aligned_cols=209 Identities=37% Similarity=0.732 Sum_probs=181.6
Q ss_pred CCCceecCCC-CCCCCCCCCCCCchHHHHHHHHHHHHHHHHhc-CCceecCHHHHHhhcC-CCCCCCCCCchHHHHHHHH
Q psy7460 742 VPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGMLEGQYAIKT-GKLVEFSKSQLVECAK-QCSGCDGCFFEPSIEYTHQ 818 (1026)
Q Consensus 742 lP~s~DwR~~-g~v~pv~dQg~CGSCWAfa~~~ale~~~~i~~-~~~~~lS~Q~lvdC~~-~~~gC~GG~~~~a~~y~~~ 818 (1026)
||++||||+. +.++||+||+.||||||||++++||++++++. ...+.||+|+|++|.. .+.+|+||.+..|++++++
T Consensus 1 lP~~~D~r~~~~~~~~v~dQg~~gsCwafa~~~~~e~~~~~~~~~~~~~lS~q~l~~~~~~~~~~c~gg~~~~a~~~~~~ 80 (219)
T PF00112_consen 1 LPKSFDWRDKGGRITPVRDQGSCGSCWAFAAAAALESRLAIQNNGKNVDLSEQYLIDCSNKYNKGCDGGSPFDALKYIKN 80 (219)
T ss_dssp STSSEEGGGTTTCSG---BTTSSBTHHHHHHHHHHHHHHHHHHTSSCEEB-HHHHHHHSTGTSSTTBBBEHHHHHHHHHH
T ss_pred CCCCEecccCCCCcCccccCCcccccccchhccceeccccccccccccccccccccccccccccccccCcccccceeecc
Confidence 7999999998 48999999999999999999999999999998 7889999999999997 5789999999999999988
Q ss_pred -cCCCCCCcccCcCCC-CCcccccCCCCcceEEecceeeecC--hHHHHHHHHHhcCCEEEEEeC-C-CCcccCCcceeC
Q psy7460 819 -AGLESEKDYPYKNAN-GEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVLLNS-D-LIHDYNGTPIRK 892 (1026)
Q Consensus 819 -~Gi~~e~~yPY~~~~-~~~~~C~~~~~~~~~~~~~~~~~~~--~~~~ik~~l~~~GPV~v~i~~-~-~f~~y~~Gi~~~ 892 (1026)
+|+++|++|||...+ . .|.........+++..|..+. +.++||++|.++|||+++|.+ + .|+.|++|||..
T Consensus 81 ~~Gi~~e~~~pY~~~~~~---~c~~~~~~~~~~~i~~~~~~~~~~~~~ik~~L~~~gpV~~~~~~~~~~f~~~~~gi~~~ 157 (219)
T PF00112_consen 81 NNGIVTEEDYPYNGNENP---TCKSKKSNSYYVKIKGYGKVKDNDIEDIKKALMKYGPVVASIDVSSEDFQNYKSGIYDP 157 (219)
T ss_dssp HTSBEBTTTS--SSSSSC---SSCHSGGGEEEBEESEEEEEESTCHHHHHHHHHHHSSEEEEEEEESHHHHTEESSEECS
T ss_pred cCcccccccccccccccc---cccccccccccccccccccccccchhHHHHHHhhCceeeeeeeccccccccccceeeec
Confidence 999999999999876 4 787654443345667776654 489999999999999999998 4 399999999988
Q ss_pred CCCCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCcEEEEEecCC-ccccCCcceEEE
Q psy7460 893 NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN-ACGIEQIAGYAT 955 (1026)
Q Consensus 893 ~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n-~cGi~~~~~~~~ 955 (1026)
+ .|....++|+|+|||||++.+++|||||||||+.||++|||||+|+.+ +|||++.++||+
T Consensus 158 ~--~~~~~~~~Hav~iVGy~~~~~~~~wiv~NSWG~~WG~~Gy~~i~~~~~~~c~i~~~~~~~~ 219 (219)
T PF00112_consen 158 P--DCSNESGGHAVLIVGYDDENGKGYWIVKNSWGTDWGDNGYFRISYDYNNECGIESQAVYPI 219 (219)
T ss_dssp T--SSSSSSEEEEEEEEEEEEETTEEEEEEE-SBTTTSTBTTEEEEESSSSSGGGTTSSEEEEE
T ss_pred c--ccccccccccccccccccccceeeEeeehhhCCccCCCeEEEEeeCCCCcCccCceeeecC
Confidence 6 576678999999999999999999999999999999999999999987 999999999985
No 25
>smart00645 Pept_C1 Papain family cysteine protease.
Probab=100.00 E-value=2.5e-44 Score=369.24 Aligned_cols=165 Identities=47% Similarity=0.978 Sum_probs=149.5
Q ss_pred CCCceeccCCCCCCCCCCCCCCcchHHHHhHHHHHHHHHHHcCCCccCCHHHHHhhhcC-CCCCCCCCCCc-hHHHHHHh
Q psy7460 376 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ-CSGCGGCDGLE-QPIEYTHQ 453 (1026)
Q Consensus 376 lP~~~DwR~~~~vt~vk~Qg~CgSCwAfa~~~~~e~~~~i~~~~~~~lS~q~lvdC~~~-~~gC~G~~G~~-~a~~~~~~ 453 (1026)
||++||||++++++|||||+.||||||||++++||++++|++++.+.||+|+|++|... +.||.| |.+ .|++|+.+
T Consensus 1 lP~~~D~R~~~~~~~v~dQg~CGsCwAfa~~~~ie~~~~i~~~~~~~lS~q~l~~C~~~~~~gC~G--G~~~~a~~~~~~ 78 (174)
T smart00645 1 LPESFDWRKKGAVTPVKDQGQCGSCWAFSATGALEGRYCIKTGKLVSLSEQQLVDCSTGGNNGCNG--GLPDNAFEYIKK 78 (174)
T ss_pred CCCcCcccccCCCCccccCcccchHHHHHHHHHHHHHHHHhcCCccccCHHHHhhhcCCCCCCCCC--cCHHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999975 669999 999 99999988
Q ss_pred C-CcCCCCCCcccCCCCCccccccCCCCceeeecceeEecCCHHHHHHHHHcCCCEEEEEecCccccccCCceeCCCCCC
Q psy7460 454 A-GLESEKDYPYRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETC 532 (1026)
Q Consensus 454 ~-Gi~~e~~ypY~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gPv~v~i~~~~~~~y~~Gi~~~~~~~c 532 (1026)
. |+++|++|||++ ++.+.+..|++|++|||. ...|
T Consensus 79 ~~Gi~~e~~~PY~~------------------------------------------~~~~~~~~f~~Y~~Gi~~--~~~~ 114 (174)
T smart00645 79 NGGLETESCYPYTG------------------------------------------SVAIDASDFQFYKSGIYD--HPGC 114 (174)
T ss_pred cCCcccccccCccc------------------------------------------EEEEEcccccCCcCeEEC--CCCC
Confidence 7 999999999974 566666679999999994 2257
Q ss_pred CCCCCCeEEEEEEeeec-CCccEEEEEcCCCCCCCCCcEEEEEecC-Cccccccee
Q psy7460 533 SPYDLGHAVLLVGYGKQ-DDIPYWLARNSWGPIGPDEGFFKIERGN-NACGIEQIA 586 (1026)
Q Consensus 533 ~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~Gy~ri~r~~-n~cgi~~~~ 586 (1026)
....++|+|+|||||++ +|++|||||||||+.|||+|||||.|+. |.|||+...
T Consensus 115 ~~~~~~Hav~ivGyg~~~~g~~yWii~NSwG~~WG~~G~~~i~~~~~~~c~i~~~~ 170 (174)
T smart00645 115 GSGTLDHAVLIVGYGTEENGKDYWIVKNSWGTDWGENGYFRIARGKNNECGIEASV 170 (174)
T ss_pred CCCcccEEEEEEEEeecCCCeeEEEEECCCCCCcccCeEEEEEcCCCCccCceeee
Confidence 65557999999999987 8999999999999999999999999998 999996543
No 26
>smart00645 Pept_C1 Papain family cysteine protease.
Probab=100.00 E-value=1.7e-43 Score=363.08 Aligned_cols=165 Identities=46% Similarity=0.939 Sum_probs=151.1
Q ss_pred CCCceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHhcCCceecCHHHHHhhcCC-CCCCCCCCchHHHHHHHHc-
Q psy7460 742 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ-CSGCDGCFFEPSIEYTHQA- 819 (1026)
Q Consensus 742 lP~s~DwR~~g~v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~~~~~lS~Q~lvdC~~~-~~gC~GG~~~~a~~y~~~~- 819 (1026)
||++||||+.++++||+||+.||||||||++++||+++++++++.+.||+|+|++|... +.||+||.+..|++|+.++
T Consensus 1 lP~~~D~R~~~~~~~v~dQg~CGsCwAfa~~~~ie~~~~i~~~~~~~lS~q~l~~C~~~~~~gC~GG~~~~a~~~~~~~~ 80 (174)
T smart00645 1 LPESFDWRKKGAVTPVKDQGQCGSCWAFSATGALEGRYCIKTGKLVSLSEQQLVDCSTGGNNGCNGGLPDNAFEYIKKNG 80 (174)
T ss_pred CCCcCcccccCCCCccccCcccchHHHHHHHHHHHHHHHHhcCCccccCHHHHhhhcCCCCCCCCCcCHHHHHHHHHHcC
Confidence 69999999999999999999999999999999999999999998999999999999975 6799999999999999887
Q ss_pred CCCCCCcccCcCCCCCcccccCCCCcceEEecceeeecChHHHHHHHHHhcCCEEEEEeCCCCcccCCcceeCCCCCCCC
Q psy7460 820 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSP 899 (1026)
Q Consensus 820 Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i~~~~f~~y~~Gi~~~~~~~c~~ 899 (1026)
|+++|++|||.. ++.+.+..|++|++|||..+ .|+.
T Consensus 81 Gi~~e~~~PY~~------------------------------------------~~~~~~~~f~~Y~~Gi~~~~--~~~~ 116 (174)
T smart00645 81 GLETESCYPYTG------------------------------------------SVAIDASDFQFYKSGIYDHP--GCGS 116 (174)
T ss_pred CcccccccCccc------------------------------------------EEEEEcccccCCcCeEECCC--CCCC
Confidence 999999999965 55666667999999999765 4765
Q ss_pred CCCCeEEEEEEeeec-CCccEEEEEcCCCCCCCCCcEEEEEecC-CccccCCc
Q psy7460 900 YDLGHAVLLVGYGKQ-DNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQI 950 (1026)
Q Consensus 900 ~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~-n~cGi~~~ 950 (1026)
..++|+|+|||||++ ++++|||||||||+.|||+|||||.|+. |.|||+..
T Consensus 117 ~~~~Hav~ivGyg~~~~g~~yWii~NSwG~~WG~~G~~~i~~~~~~~c~i~~~ 169 (174)
T smart00645 117 GTLDHAVLIVGYGTEENGKDYWIVKNSWGTDWGENGYFRIARGKNNECGIEAS 169 (174)
T ss_pred CcccEEEEEEEEeecCCCeeEEEEECCCCCCcccCeEEEEEcCCCCccCceee
Confidence 558999999999987 8999999999999999999999999997 99999654
No 27
>PTZ00462 Serine-repeat antigen protein; Provisional
Probab=100.00 E-value=2.8e-41 Score=404.48 Aligned_cols=202 Identities=22% Similarity=0.424 Sum_probs=163.0
Q ss_pred CCCCCCCCCCCcchHHHHhHHHHHHHHHHHcCCCccCCHHHHHhhhcC--CCCCCCCCCCc--hHHHHHHhC-CcCCCCC
Q psy7460 387 VTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCGGCDGLE--QPIEYTHQA-GLESEKD 461 (1026)
Q Consensus 387 ~vt~vk~Qg~CgSCwAfa~~~~~e~~~~i~~~~~~~lS~q~lvdC~~~--~~gC~G~~G~~--~a~~~~~~~-Gi~~e~~ 461 (1026)
...||||||.||||||||+++++|++++|+++.++.||+|+|+||+.. +.||.| |+. .++.|+++. ||++|++
T Consensus 543 s~i~VKDQG~CGSCWAFASaaaLES~~cIkgg~~v~LSeQqLVDCs~~~gn~GC~G--G~~~~efl~yI~e~GgLptESd 620 (1004)
T PTZ00462 543 SKIQIEDQGNCAISWIFASKYHLETIKCMKGYEPHAISALYIANCSKGEHKDRCDE--GSNPLEFLQIIEDNGFLPADSN 620 (1004)
T ss_pred CCCCcccCCcchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhcccccCCCCCCC--CCcHHHHHHHHHHcCCCccccc
Confidence 357999999999999999999999999999999999999999999864 579998 765 455888665 5899999
Q ss_pred CcccC--CCCCccccccCCCC-----------------ceeeecceeEecCC----------HHHHHHHHHcCCCEEEEE
Q psy7460 462 YPYRN--GNGEKFKCAYDKSK-----------------VKLFTGKDFLYFNG----------SETMKKILYKYGPLSVGL 512 (1026)
Q Consensus 462 ypY~~--~~~~~~~C~~~~~~-----------------~~~~~~~~~~~~~~----------~~~~~~~l~~~gPv~v~i 512 (1026)
|||.+ ... .|...... .....+.+|..+.. ++.|+++|+++|||+|+|
T Consensus 621 YPYt~k~~~g---~Cp~~~~~w~n~~~~~kll~~~~~~~~~i~~kgY~~~~s~~~~~n~d~~i~~IK~eI~~kGPVaV~I 697 (1004)
T PTZ00462 621 YLYNYTKVGE---DCPDEEDHWMNLLDHGKILNHNKKEPNSLDGKAYRAYESEHFHDKMDAFIKIIKDEIMNKGSVIAYI 697 (1004)
T ss_pred CCCccCCCCC---CCCCCcccccccccccccccccccccceeeccceEEecccccccchhhHHHHHHHHHHhcCCEEEEE
Confidence 99986 333 57532110 01112234443321 468999999999999999
Q ss_pred ecCcccccc-CCceeCCCCCCCCCCCCeEEEEEEeeec-----CCccEEEEEcCCCCCCCCCcEEEEEe-cCCcccccce
Q psy7460 513 NSHLIHFYN-GTPIRKNDETCSPYDLGHAVLLVGYGKQ-----DDIPYWLARNSWGPIGPDEGFFKIER-GNNACGIEQI 585 (1026)
Q Consensus 513 ~~~~~~~y~-~Gi~~~~~~~c~~~~~~HaV~iVGyG~~-----~g~~YWivkNSWG~~WGe~Gy~ri~r-~~n~cgi~~~ 585 (1026)
++..|++|. +|||. ...|+...++|||+|||||++ ++++|||||||||+.|||+|||||+| |.|.|||...
T Consensus 698 dAsdf~~Y~~sGIyv--~~~Cgs~~~nHAVlIVGYGt~in~eg~gk~YWIVRNSWGt~WGEnGYFKI~r~g~n~CGin~i 775 (1004)
T PTZ00462 698 KAENVLGYEFNGKKV--QNLCGDDTADHAVNIVGYGNYINDEDEKKSYWIVRNSWGKYWGDEGYFKVDMYGPSHCEDNFI 775 (1004)
T ss_pred EeehHHhhhcCCccc--cCCCCCCcCCceEEEEEecccccccCCCCceEEEEcCCCCCcCCCeEEEEEeCCCCCCccchh
Confidence 997788884 89875 346886678999999999974 25799999999999999999999998 6899999999
Q ss_pred eeeeEEehhh
Q psy7460 586 AGYATIDVVI 595 (1026)
Q Consensus 586 ~~~~~~~~~~ 595 (1026)
..+|++++.+
T Consensus 776 ~t~~~fn~d~ 785 (1004)
T PTZ00462 776 HSVVIFNIDL 785 (1004)
T ss_pred eeeeeEeecc
Confidence 9999986433
No 28
>PTZ00462 Serine-repeat antigen protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=395.15 Aligned_cols=200 Identities=24% Similarity=0.454 Sum_probs=163.7
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHHHhcCCceecCHHHHHhhcCC--CCCCCCCCch-HHHHHHHHc-CCCCCCcccC
Q psy7460 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFE-PSIEYTHQA-GLESEKDYPY 829 (1026)
Q Consensus 754 v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~~~~~lS~Q~lvdC~~~--~~gC~GG~~~-~a~~y~~~~-Gi~~e~~yPY 829 (1026)
..||+|||.||||||||++++||++++|++++.+.||+|+|+||+.. +.||.||... .++.|++++ |+++|++|||
T Consensus 544 ~i~VKDQG~CGSCWAFASaaaLES~~cIkgg~~v~LSeQqLVDCs~~~gn~GC~GG~~~~efl~yI~e~GgLptESdYPY 623 (1004)
T PTZ00462 544 KIQIEDQGNCAISWIFASKYHLETIKCMKGYEPHAISALYIANCSKGEHKDRCDEGSNPLEFLQIIEDNGFLPADSNYLY 623 (1004)
T ss_pred CCCcccCCcchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhcccccCCCCCCCCCcHHHHHHHHHHcCCCcccccCCC
Confidence 57999999999999999999999999999999999999999999853 6899999755 455888766 5899999999
Q ss_pred cC--CCCCcccccCCCC-----------------cceEEecceeeecCh----------HHHHHHHHHhcCCEEEEEeCC
Q psy7460 830 KN--ANGEKFKCAYDKS-----------------KVKLFTGKDFLHFNG----------SETMKKILYKYGPLSVLLNSD 880 (1026)
Q Consensus 830 ~~--~~~~~~~C~~~~~-----------------~~~~~~~~~~~~~~~----------~~~ik~~l~~~GPV~v~i~~~ 880 (1026)
.+ ..+ .|+.... ....+...+|..+.. ++.||++|+++|||+|+|+++
T Consensus 624 t~k~~~g---~Cp~~~~~w~n~~~~~kll~~~~~~~~~i~~kgY~~~~s~~~~~n~d~~i~~IK~eI~~kGPVaV~IdAs 700 (1004)
T PTZ00462 624 NYTKVGE---DCPDEEDHWMNLLDHGKILNHNKKEPNSLDGKAYRAYESEHFHDKMDAFIKIIKDEIMNKGSVIAYIKAE 700 (1004)
T ss_pred ccCCCCC---CCCCCcccccccccccccccccccccceeeccceEEecccccccchhhHHHHHHHHHHhcCCEEEEEEee
Confidence 86 334 6764321 011223345544321 468999999999999999997
Q ss_pred CCcccC-CcceeCCCCCCCCCCCCeEEEEEEeeec-----CCccEEEEEcCCCCCCCCCcEEEEEe-cCCccccCCcceE
Q psy7460 881 LIHDYN-GTPIRKNDETCSPYDLGHAVLLVGYGKQ-----DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGY 953 (1026)
Q Consensus 881 ~f~~y~-~Gi~~~~~~~c~~~~~~HaV~iVGyg~~-----~g~~yWivkNSWG~~WGe~Gy~~i~r-~~n~cGi~~~~~~ 953 (1026)
.|+.|. +|||... .|+...++|||+|||||+. ++++|||||||||+.|||+|||||+| +.+.|||+....+
T Consensus 701 df~~Y~~sGIyv~~--~Cgs~~~nHAVlIVGYGt~in~eg~gk~YWIVRNSWGt~WGEnGYFKI~r~g~n~CGin~i~t~ 778 (1004)
T PTZ00462 701 NVLGYEFNGKKVQN--LCGDDTADHAVNIVGYGNYINDEDEKKSYWIVRNSWGKYWGDEGYFKVDMYGPSHCEDNFIHSV 778 (1004)
T ss_pred hHHhhhcCCccccC--CCCCCcCCceEEEEEecccccccCCCCceEEEEcCCCCCcCCCeEEEEEeCCCCCCccchheee
Confidence 788884 8987664 5876678999999999974 25799999999999999999999998 6899999999999
Q ss_pred EEEee
Q psy7460 954 ATIDV 958 (1026)
Q Consensus 954 ~~~~~ 958 (1026)
+++++
T Consensus 779 ~~fn~ 783 (1004)
T PTZ00462 779 VIFNI 783 (1004)
T ss_pred eeEee
Confidence 88874
No 29
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase). Papain-like enzymes are mostly endopeptidases with some exceptions like cathepsins B, C, H and X, which are exopeptidases. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds while mammalian CPs are primarily lysosomal enzymes responsible for protein degradation in the lysosome. Papain-like CPs are synthesized as inactive proenzymes with N-terminal propeptide regions, which are removed upon activation. Bleomycin hydrolase (BH) is a CP that detoxifies bleomycin by hydrolysis of an amide group. It acts as a carboxypeptidase on its C-terminus to convert itself into an aminopeptidase and peptide ligase. BH is found in all tissues in mammals as well as in many other eukaryotes. It forms a hexameric ring barrel str
Probab=100.00 E-value=3e-39 Score=346.04 Aligned_cols=193 Identities=28% Similarity=0.399 Sum_probs=163.8
Q ss_pred ceeccCCCCCCCCCCCCCCcchHHHHhHHHHHHHHHHHcC--CCccCCHHHHHhhhcCC-----CCCCCCCCCc-hHHH-
Q psy7460 379 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTG--KLVEFSKSQLVECAKQC-----SGCGGCDGLE-QPIE- 449 (1026)
Q Consensus 379 ~~DwR~~~~vt~vk~Qg~CgSCwAfa~~~~~e~~~~i~~~--~~~~lS~q~lvdC~~~~-----~gC~G~~G~~-~a~~- 449 (1026)
++|||+.+ ++||||||.||+|||||+++++|++++++++ +.+.||+|+|++|.... .||.| |.+ .++.
T Consensus 1 ~~d~r~~~-~~~v~dQg~~gsCwafa~~~~les~~~~~~~~~~~~~lS~q~l~~c~~~~~~~~~~~c~g--G~~~~~~~~ 77 (223)
T cd02619 1 SVDLRPLR-LTPVKNQGSRGSCWAFASAYALESAYRIKGGEDEYVDLSPQYLYICANDECLGINGSCDG--GGPLSALLK 77 (223)
T ss_pred CCcchhcC-CCCcccCCCCcCcHHHHHHHHHHHHHHHhcCCcccccCCHHHHHHhccccccccCCCCCC--CcHHHHHHH
Confidence 48999988 9999999999999999999999999999988 88999999999998752 68999 888 8887
Q ss_pred HHHhCCcCCCCCCcccCCCCCccccccC---CCCceeeecceeEecC--CHHHHHHHHHcCCCEEEEEecC-ccccccCC
Q psy7460 450 YTHQAGLESEKDYPYRNGNGEKFKCAYD---KSKVKLFTGKDFLYFN--GSETMKKILYKYGPLSVGLNSH-LIHFYNGT 523 (1026)
Q Consensus 450 ~~~~~Gi~~e~~ypY~~~~~~~~~C~~~---~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gPv~v~i~~~-~~~~y~~G 523 (1026)
+++..||++|++|||..... .|... ......+.+..|..+. ++++||++|+++|||+++|.+. .|..|++|
T Consensus 78 ~~~~~Gi~~e~~~Py~~~~~---~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ik~aL~~~gPv~~~~~~~~~~~~~~~~ 154 (223)
T cd02619 78 LVALKGIPPEEDYPYGAESD---GEEPKSEAALNAAKVKLKDYRRVLKNNIEDIKEALAKGGPVVAGFDVYSGFDRLKEG 154 (223)
T ss_pred HHHHcCCCccccCCCCCCCC---CCCCCCccchhhcceeecceeEeCchhHHHHHHHHHHCCCEEEEEEcccchhcccCc
Confidence 89999999999999998876 34321 1222234566777665 4789999999999999999984 78899999
Q ss_pred cee---CCCCCCCCCCCCeEEEEEEeeecC--CccEEEEEcCCCCCCCCCcEEEEEecC
Q psy7460 524 PIR---KNDETCSPYDLGHAVLLVGYGKQD--DIPYWLARNSWGPIGPDEGFFKIERGN 577 (1026)
Q Consensus 524 i~~---~~~~~c~~~~~~HaV~iVGyG~~~--g~~YWivkNSWG~~WGe~Gy~ri~r~~ 577 (1026)
++. .....|.....+|||+|||||++. +++|||||||||+.||++||+||.++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~Hav~ivGy~~~~~~~~~~~i~~NSwG~~wg~~Gy~~i~~~~ 213 (223)
T cd02619 155 IIYEEIVYLLYEDGDLGGHAVVIVGYDDNYVEGKGAFIVKNSWGTDWGDNGYGRISYED 213 (223)
T ss_pred cccccccccccCCCccCCeEEEEEeecCCCCCCCCEEEEEeCCCCccccCCEEEEehhh
Confidence 863 123445566789999999999886 899999999999999999999999984
No 30
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase). Papain-like enzymes are mostly endopeptidases with some exceptions like cathepsins B, C, H and X, which are exopeptidases. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds while mammalian CPs are primarily lysosomal enzymes responsible for protein degradation in the lysosome. Papain-like CPs are synthesized as inactive proenzymes with N-terminal propeptide regions, which are removed upon activation. Bleomycin hydrolase (BH) is a CP that detoxifies bleomycin by hydrolysis of an amide group. It acts as a carboxypeptidase on its C-terminus to convert itself into an aminopeptidase and peptide ligase. BH is found in all tissues in mammals as well as in many other eukaryotes. It forms a hexameric ring barrel str
Probab=100.00 E-value=8e-39 Score=342.72 Aligned_cols=194 Identities=28% Similarity=0.383 Sum_probs=165.3
Q ss_pred ceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHhcC--CceecCHHHHHhhcCCC-----CCCCCCCchHHHH-HH
Q psy7460 745 AWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTG--KLVEFSKSQLVECAKQC-----SGCDGCFFEPSIE-YT 816 (1026)
Q Consensus 745 s~DwR~~g~v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~--~~~~lS~Q~lvdC~~~~-----~gC~GG~~~~a~~-y~ 816 (1026)
.+|||+.+ ++||+|||.||+|||||+++++|+++.++++ +.+.||+|+|++|.... .||.||.+..++. ++
T Consensus 1 ~~d~r~~~-~~~v~dQg~~gsCwafa~~~~les~~~~~~~~~~~~~lS~q~l~~c~~~~~~~~~~~c~gG~~~~~~~~~~ 79 (223)
T cd02619 1 SVDLRPLR-LTPVKNQGSRGSCWAFASAYALESAYRIKGGEDEYVDLSPQYLYICANDECLGINGSCDGGGPLSALLKLV 79 (223)
T ss_pred CCcchhcC-CCCcccCCCCcCcHHHHHHHHHHHHHHHhcCCcccccCCHHHHHHhccccccccCCCCCCCcHHHHHHHHH
Confidence 48999998 9999999999999999999999999999987 88999999999998642 6999999999998 88
Q ss_pred HHcCCCCCCcccCcCCCCCcccccCC---CCcceEEecceeeecC--hHHHHHHHHHhcCCEEEEEeC-CCCcccCCcce
Q psy7460 817 HQAGLESEKDYPYKNANGEKFKCAYD---KSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVLLNS-DLIHDYNGTPI 890 (1026)
Q Consensus 817 ~~~Gi~~e~~yPY~~~~~~~~~C~~~---~~~~~~~~~~~~~~~~--~~~~ik~~l~~~GPV~v~i~~-~~f~~y~~Gi~ 890 (1026)
++.|+++|++|||..... .|... ......+++..|..+. ++++||++|+++|||++++.+ +.|..|++|++
T Consensus 80 ~~~Gi~~e~~~Py~~~~~---~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ik~aL~~~gPv~~~~~~~~~~~~~~~~~~ 156 (223)
T cd02619 80 ALKGIPPEEDYPYGAESD---GEEPKSEAALNAAKVKLKDYRRVLKNNIEDIKEALAKGGPVVAGFDVYSGFDRLKEGII 156 (223)
T ss_pred HHcCCCccccCCCCCCCC---CCCCCCccchhhcceeecceeEeCchhHHHHHHHHHHCCCEEEEEEcccchhcccCccc
Confidence 999999999999998876 44321 1222334666776654 479999999999999999998 57999999987
Q ss_pred e---CCCCCCCCCCCCeEEEEEEeeecC--CccEEEEEcCCCCCCCCCcEEEEEecC
Q psy7460 891 R---KNDETCSPYDLGHAVLLVGYGKQD--NIPYWLVRNSWGPIGPDEGFFKIERGN 942 (1026)
Q Consensus 891 ~---~~~~~c~~~~~~HaV~iVGyg~~~--g~~yWivkNSWG~~WGe~Gy~~i~r~~ 942 (1026)
. .....|....++|||+|||||++. +++|||||||||+.||++||+||+++.
T Consensus 157 ~~~~~~~~~~~~~~~~Hav~ivGy~~~~~~~~~~~i~~NSwG~~wg~~Gy~~i~~~~ 213 (223)
T cd02619 157 YEEIVYLLYEDGDLGGHAVVIVGYDDNYVEGKGAFIVKNSWGTDWGDNGYGRISYED 213 (223)
T ss_pred cccccccccCCCccCCeEEEEEeecCCCCCCCCEEEEEeCCCCccccCCEEEEehhh
Confidence 3 122235566789999999999886 899999999999999999999999974
No 31
>KOG1544|consensus
Probab=100.00 E-value=1.8e-37 Score=321.95 Aligned_cols=216 Identities=25% Similarity=0.485 Sum_probs=180.1
Q ss_pred cCCCCCCCCceeCCCC--CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CcccCHHHHHhhcC-CCCCCCCCChH
Q psy7460 5 VEKDGPVPDAWDWRKK--NVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGK--LVEFSKSQLVECAK-QCSGCDGCFFE 79 (1026)
Q Consensus 5 ~~~~~~lP~~~Dwr~~--~~~~pV~nQg~cGsCwAfA~~~~le~~~~i~~~~--~~~LS~q~l~~c~~-~~~gC~GG~~~ 79 (1026)
+++..+||+.|+.|++ +++.|+.|||+|++.|||+++++.++|++|++.+ ...||+|+|++|.. +..||+||.+.
T Consensus 203 l~p~~~LPE~F~As~KWp~liH~plDQgnCa~SWafSTaavasDRiAI~S~GR~t~~LSpQnLlSC~~h~q~GC~gG~lD 282 (470)
T KOG1544|consen 203 LNPGEVLPEAFEASEKWPNLIHEPLDQGNCAGSWAFSTAAVASDRVAIHSLGRMTPVLSPQNLLSCDTHQQQGCRGGRLD 282 (470)
T ss_pred cCcccccchhhhhhhcCCccccCccccCCcccceeeeeehhccceeEEeeccccccccChHHhcchhhhhhccCccCccc
Confidence 5556899999999998 8999999999999999999999999999999865 47799999999975 45899999999
Q ss_pred HHHHHHHHcCCCCCCCcCCCCCC-CCccc------------------CCCCccc--ceeeccceeeecCcHHHHHHHHHh
Q psy7460 80 PSIEYTHQAGLESEKDYPYKNAN-GEKFK------------------CAYDKSK--VKLFTGKDFLHFNGSETMKKILYK 138 (1026)
Q Consensus 80 ~a~~~~~~~Gv~~e~~~PY~~~~-~~~~~------------------c~~~~~~--~~~~~~~~~~~~~~~~~ik~~I~~ 138 (1026)
.|+-||.+.|++...||||.... .+.+. |+....+ ........|.+.+++++|+++|++
T Consensus 283 RAWWYlRKrGvVsdhCYP~~~dQ~~~~~~C~m~sR~~grgkRqat~~CPn~~~~Sn~iyq~tPPYrVSSnE~eImkElM~ 362 (470)
T KOG1544|consen 283 RAWWYLRKRGVVSDHCYPFSGDQAGPAPPCMMHSRAMGRGKRQATAHCPNSYVNSNDIYQVTPPYRVSSNEKEIMKELME 362 (470)
T ss_pred chheeeecccccccccccccCCCCCCCCCceeeccccCcccccccCcCCCcccccCceeeecCCeeccCCHHHHHHHHHh
Confidence 99999999999999999996432 22223 4433222 222334456677789999999999
Q ss_pred cCCcEEEEec-ccccccCCceeecCCCCC-----CCCCCCcEEEEEEeeecC-----CccEEEEEcCCCCCCCCCcEEEE
Q psy7460 139 YGPLSVLLNS-DLIHDYNGTPIRKNDETC-----SPYDLGHAVLLVGYGKQD-----NIPYWLVRNSWGPIGPDEGFFKI 207 (1026)
Q Consensus 139 ~GPV~~~i~~-~~~~~y~~gi~~~~~~~~-----~~~~~~HAV~IVGyG~~~-----g~~yWIVrNSWG~~WG~~Gyf~i 207 (1026)
+|||.+.|.+ .+|+.|++|||.-.+... ....+.|+|.|.|||++. ..+|||..||||+.|||+|||||
T Consensus 363 NGPVQA~m~VHEDFF~YkgGiY~H~~~~~~~~e~yr~~gtHsVk~tGWG~~~~~~G~~~KyW~aANSWG~~WGE~GYFri 442 (470)
T KOG1544|consen 363 NGPVQALMEVHEDFFLYKGGIYSHTPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPAWGERGYFRI 442 (470)
T ss_pred CCChhhhhhhhhhhhhhccceeeccccccCCchhhhhcccceEEEeecccccCCCCCeeEEEEeecccccccccCceEEE
Confidence 9999999988 788899999998644322 234678999999999763 36999999999999999999999
Q ss_pred EecCCccccccce
Q psy7460 208 ERGNNACGIEQIA 220 (1026)
Q Consensus 208 ~~g~n~~gie~~~ 220 (1026)
.||+|+|-||+..
T Consensus 443 LRGvNecdIEsfv 455 (470)
T KOG1544|consen 443 LRGVNECDIESFV 455 (470)
T ss_pred eccccchhhhHhh
Confidence 9999999999753
No 32
>KOG1544|consensus
Probab=100.00 E-value=6.5e-37 Score=317.87 Aligned_cols=248 Identities=24% Similarity=0.432 Sum_probs=187.6
Q ss_pred cccCCCCCHHH-HhhhcCCCCCccchhhhhhhhHHHHHhhhcccCCCCCCCceeccCC--CCCCCCCCCCCCcchHHHHh
Q psy7460 329 TSEFSDRSPEE-ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK--NVTGPAGDQAACGSCWAFSI 405 (1026)
Q Consensus 329 ~n~fsD~t~eE-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~--~~vt~vk~Qg~CgSCwAfa~ 405 (1026)
..+|=.||.++ |+..+|.-.++.... ...+. ........+||+.||-|.+ +.+.++.|||.|++.|||+|
T Consensus 168 YSaFWGmtL~DGiKyRLGTL~Ps~sv~---nMNEi----~~~l~p~~~LPE~F~As~KWp~liH~plDQgnCa~SWafST 240 (470)
T KOG1544|consen 168 YSAFWGMTLDDGIKYRLGTLRPSSSVM---NMNEI----YTVLNPGEVLPEAFEASEKWPNLIHEPLDQGNCAGSWAFST 240 (470)
T ss_pred hhhhhcccccccceeeecccCchhhhh---hHHhH----hhccCcccccchhhhhhhcCCccccCccccCCcccceeeee
Confidence 34566677666 444455443332221 01111 1111234689999999987 78999999999999999999
Q ss_pred HHHHHHHHHHHcCC--CccCCHHHHHhhhcC-CCCCCCCCCCc-hHHHHHHhCCcCCCCCCcccCCCCC-ccc-------
Q psy7460 406 AGMLEGQYAIKTGK--LVEFSKSQLVECAKQ-CSGCGGCDGLE-QPIEYTHQAGLESEKDYPYRNGNGE-KFK------- 473 (1026)
Q Consensus 406 ~~~~e~~~~i~~~~--~~~lS~q~lvdC~~~-~~gC~G~~G~~-~a~~~~~~~Gi~~e~~ypY~~~~~~-~~~------- 473 (1026)
+++..+|++|.+.. ...||+|+|++|... ..||+| |.. .|+-|+++.|++...||||...+.. ...
T Consensus 241 aavasDRiAI~S~GR~t~~LSpQnLlSC~~h~q~GC~g--G~lDRAWWYlRKrGvVsdhCYP~~~dQ~~~~~~C~m~sR~ 318 (470)
T KOG1544|consen 241 AAVASDRVAIHSLGRMTPVLSPQNLLSCDTHQQQGCRG--GRLDRAWWYLRKRGVVSDHCYPFSGDQAGPAPPCMMHSRA 318 (470)
T ss_pred ehhccceeEEeeccccccccChHHhcchhhhhhccCcc--CcccchheeeecccccccccccccCCCCCCCCCceeeccc
Confidence 99999999998744 357999999999864 689999 988 9999999999999999999754321 123
Q ss_pred -----------cccCCCCc-eeeec-ceeEecCCHHHHHHHHHcCCCEEEEEec-CccccccCCceeCCCCCCC-----C
Q psy7460 474 -----------CAYDKSKV-KLFTG-KDFLYFNGSETMKKILYKYGPLSVGLNS-HLIHFYNGTPIRKNDETCS-----P 534 (1026)
Q Consensus 474 -----------C~~~~~~~-~~~~~-~~~~~~~~~~~~~~~l~~~gPv~v~i~~-~~~~~y~~Gi~~~~~~~c~-----~ 534 (1026)
|.....+. .+|+. ..|...++|++|+++|+++|||-+.+.+ .+|+.|++|||.+.+-.-. .
T Consensus 319 ~grgkRqat~~CPn~~~~Sn~iyq~tPPYrVSSnE~eImkElM~NGPVQA~m~VHEDFF~YkgGiY~H~~~~~~~~e~yr 398 (470)
T KOG1544|consen 319 MGRGKRQATAHCPNSYVNSNDIYQVTPPYRVSSNEKEIMKELMENGPVQALMEVHEDFFLYKGGIYSHTPVSLGRPERYR 398 (470)
T ss_pred cCcccccccCcCCCcccccCceeeecCCeeccCCHHHHHHHHHhCCChhhhhhhhhhhhhhccceeeccccccCCchhhh
Confidence 33332222 23332 3455556999999999999999999999 5799999999976432221 1
Q ss_pred CCCCeEEEEEEeeecCC-----ccEEEEEcCCCCCCCCCcEEEEEecCCcccccce
Q psy7460 535 YDLGHAVLLVGYGKQDD-----IPYWLARNSWGPIGPDEGFFKIERGNNACGIEQI 585 (1026)
Q Consensus 535 ~~~~HaV~iVGyG~~~g-----~~YWivkNSWG~~WGe~Gy~ri~r~~n~cgi~~~ 585 (1026)
....|+|.|.|||++.+ .+|||..||||+.|||+|||||.||+|.|.||+.
T Consensus 399 ~~gtHsVk~tGWG~~~~~~G~~~KyW~aANSWG~~WGE~GYFriLRGvNecdIEsf 454 (470)
T KOG1544|consen 399 RHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPAWGERGYFRILRGVNECDIESF 454 (470)
T ss_pred hcccceEEEeecccccCCCCCeeEEEEeecccccccccCceEEEeccccchhhhHh
Confidence 24589999999998743 5799999999999999999999999999999974
No 33
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=3.4e-28 Score=262.01 Aligned_cols=237 Identities=24% Similarity=0.333 Sum_probs=171.5
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHhcCCceecCHHHH-----HhhcCC-CCC-CCCCCchHH
Q psy7460 740 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQL-----VECAKQ-CSG-CDGCFFEPS 812 (1026)
Q Consensus 740 ~~lP~s~DwR~~g~v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~~~~~lS~Q~l-----vdC~~~-~~g-C~GG~~~~a 812 (1026)
..+|+.||||..|.|+||||||.|||||||+++++||+.+.-.. ...+|+-.+ +-|... ..+ -+||....+
T Consensus 97 ~s~~~~fd~r~~g~vs~v~dQg~~Gscwaf~t~~sles~l~~~~--~w~~s~~nm~~ll~~~ye~~fd~~~~d~g~~~m~ 174 (372)
T COG4870 97 ASLPSYFDRRDEGKVSPVKDQGSGGSCWAFATTRSLESYLNPES--AWDFSENNMKNLLGVPYEKGFDYTSNDGGNADMS 174 (372)
T ss_pred ccchhheeeeccCCcccccccCcccceEeeeehhhhhheecccc--cccccccchhhhcCCCccccCCCccccCCccccc
Confidence 35899999999999999999999999999999999999886543 334444333 223221 111 247777777
Q ss_pred HHHH-HHcCCCCCCcccCcCCCCCcccccCCCCcceEEecceeee----cChHHHHHHHHHhcCCEEEEEe--CCCCccc
Q psy7460 813 IEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH----FNGSETMKKILYKYGPLSVLLN--SDLIHDY 885 (1026)
Q Consensus 813 ~~y~-~~~Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~~~~~~~~~----~~~~~~ik~~l~~~GPV~v~i~--~~~f~~y 885 (1026)
..|+ .+.|.+.|.+-||..... .|+.+....+..+...+.. ..+.-.||+++..+|-++.+|. +..+...
T Consensus 175 ~a~l~e~sgpv~et~d~y~~~s~---~~~~~~p~~k~~~~~~~i~~~~~~LdnG~i~~~~~~yg~~s~~~~id~~~~~~~ 251 (372)
T COG4870 175 AAYLTEWSGPVYETDDPYSENSY---FSPTNLPVTKHVQEAQIIPSRKKYLDNGNIKAMFGFYGAVSSSMYIDATNSLGI 251 (372)
T ss_pred cccccccCCcchhhcCccccccc---cCCcCCchhhccccceecccchhhhcccchHHHHhhhccccceeEEeccccccc
Confidence 7886 678999999999988777 6665444333333333332 1235568888888888775544 4333333
Q ss_pred CCcceeCCCCCCCCCCCCeEEEEEEeeec----------CCccEEEEEcCCCCCCCCCcEEEEEecCCccccCCcceEEE
Q psy7460 886 NGTPIRKNDETCSPYDLGHAVLLVGYGKQ----------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 955 (1026)
Q Consensus 886 ~~Gi~~~~~~~c~~~~~~HaV~iVGyg~~----------~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cGi~~~~~~~~ 955 (1026)
.-+.|... +....+|||+||||++. .|...||||||||++||++|||||++..-..|-
T Consensus 252 ~~~~~~~~----s~~~~gHAv~iVGyDDs~~~n~~~~~~~g~GAfiikNSWGt~wG~~GYfwisY~ya~~g~-------- 319 (372)
T COG4870 252 CIPYPYVD----SGENWGHAVLIVGYDDSFDINNFKYGPPGDGAFIIKNSWGTNWGENGYFWISYYYALNGD-------- 319 (372)
T ss_pred ccCCCCCC----ccccccceEEEEeccccccccccccCCCCCceEEEECccccccccCceEEEEeeeccccc--------
Confidence 33444332 12578999999999864 256799999999999999999999998655551
Q ss_pred EeecCCCCccCCCCCCcEEEEEeccCCCCcceeeeecccCCC
Q psy7460 956 IDVVKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPI 997 (1026)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~v~~~g~g~~~~~~~w~~~~~~~~~ 997 (1026)
.+..++++.++||++++||...||+ -.++|. +|+..++
T Consensus 320 a~~~D~y~~i~qydpl~wv~~~~y~---~~~~w~-~n~~~a~ 357 (372)
T COG4870 320 AEALDFYVYIYQYDPLGWVITSGYG---LNTAWM-ANSFAAG 357 (372)
T ss_pred ccccCcceEEeeccCcceEeecCcC---cchhhh-hhhhccc
Confidence 3457799999999999999999999 448886 7877764
No 34
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=3e-23 Score=224.00 Aligned_cols=204 Identities=23% Similarity=0.256 Sum_probs=130.5
Q ss_pred CCCCCCceeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC---CcccCHHHHHhhcCCC--CCCCCCChHHHH
Q psy7460 8 DGPVPDAWDWRKKNVTGPAGDQADCGSCWAFSIAGMLEGQYAIKTGK---LVEFSKSQLVECAKQC--SGCDGCFFEPSI 82 (1026)
Q Consensus 8 ~~~lP~~~Dwr~~~~~~pV~nQg~cGsCwAfA~~~~le~~~~i~~~~---~~~LS~q~l~~c~~~~--~gC~GG~~~~a~ 82 (1026)
...||..||||..+-|+||||||.||+||||+++++||+.+.-.... ...+..+..+.|.+.. ..-+||....+.
T Consensus 96 ~~s~~~~fd~r~~g~vs~v~dQg~~Gscwaf~t~~sles~l~~~~~w~~s~~nm~~ll~~~ye~~fd~~~~d~g~~~m~~ 175 (372)
T COG4870 96 SASLPSYFDRRDEGKVSPVKDQGSGGSCWAFATTRSLESYLNPESAWDFSENNMKNLLGVPYEKGFDYTSNDGGNADMSA 175 (372)
T ss_pred cccchhheeeeccCCcccccccCcccceEeeeehhhhhheecccccccccccchhhhcCCCccccCCCccccCCcccccc
Confidence 34599999999999999999999999999999999999988543311 1223333333333211 112366666555
Q ss_pred HHHHHc-CCCCCCCcCCCCCCCCcccCCCCccc-ceeeccceeeecCcHHHHHHHHHhcCCcEEEEecc--cccccCCce
Q psy7460 83 EYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTP 158 (1026)
Q Consensus 83 ~~~~~~-Gv~~e~~~PY~~~~~~~~~c~~~~~~-~~~~~~~~~~~~~~~~~ik~~I~~~GPV~~~i~~~--~~~~y~~gi 158 (1026)
.++.+- |.+.+.+-||.....-.+.|.+.... ............-+.-.||+++...|.+...|..+ .+....-+.
T Consensus 176 a~l~e~sgpv~et~d~y~~~s~~~~~~~p~~k~~~~~~~i~~~~~~LdnG~i~~~~~~yg~~s~~~~id~~~~~~~~~~~ 255 (372)
T COG4870 176 AYLTEWSGPVYETDDPYSENSYFSPTNLPVTKHVQEAQIIPSRKKYLDNGNIKAMFGFYGAVSSSMYIDATNSLGICIPY 255 (372)
T ss_pred ccccccCCcchhhcCccccccccCCcCCchhhccccceecccchhhhcccchHHHHhhhccccceeEEecccccccccCC
Confidence 555444 78888888888766533333222111 01111111111123446889998899987665543 222222222
Q ss_pred eecCCCCCCCCCCCcEEEEEEeeecC----------CccEEEEEcCCCCCCCCCcEEEEEecCCccc
Q psy7460 159 IRKNDETCSPYDLGHAVLLVGYGKQD----------NIPYWLVRNSWGPIGPDEGFFKIERGNNACG 215 (1026)
Q Consensus 159 ~~~~~~~~~~~~~~HAV~IVGyG~~~----------g~~yWIVrNSWG~~WG~~Gyf~i~~g~n~~g 215 (1026)
+. .......+|||+||||++.. |.+.||||||||++||++|||||.+..-..|
T Consensus 256 ~~----~~s~~~~gHAv~iVGyDDs~~~n~~~~~~~g~GAfiikNSWGt~wG~~GYfwisY~ya~~g 318 (372)
T COG4870 256 PY----VDSGENWGHAVLIVGYDDSFDINNFKYGPPGDGAFIIKNSWGTNWGENGYFWISYYYALNG 318 (372)
T ss_pred CC----CCccccccceEEEEeccccccccccccCCCCCceEEEECccccccccCceEEEEeeecccc
Confidence 22 11225689999999998642 3579999999999999999999999765555
No 35
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC). The proteins of this subfamily contain a large insert relative to the C1A peptidase (papain) subfamily. BH is a cysteine peptidase that detoxifies bleomycin by hydrolysis of an amide group. It acts as a carboxypeptidase on its C-terminus to convert itself into an aminopeptidase and peptide ligase. BH is found in all tissues in mammals as well as in many other eukaryotes. Bleomycin, a glycopeptide derived from the fungus Streptomyces verticullus, is an effective anticancer drug due to its ability to induce DNA strand breaks. Human BH is the major cause of tumor cell resistance to bleomycin chemotherapy, and is also genetically linked to Alzheimer's disease. In addition to its peptidase activity, the yeast BH (Gal6) binds DNA and acts as a repressor in the Gal4 regulatory system. BH forms a hexameric ring barrel structure w
Probab=99.76 E-value=5e-18 Score=194.72 Aligned_cols=185 Identities=24% Similarity=0.322 Sum_probs=127.9
Q ss_pred CCCCCCCCCcchHHHHhHHHHHHHHHHH-cCCCccCCHHHHHh----------------hhc------------CCCCCC
Q psy7460 389 GPAGDQAACGSCWAFSIAGMLEGQYAIK-TGKLVEFSKSQLVE----------------CAK------------QCSGCG 439 (1026)
Q Consensus 389 t~vk~Qg~CgSCwAfa~~~~~e~~~~i~-~~~~~~lS~q~lvd----------------C~~------------~~~gC~ 439 (1026)
.||+||+.-|-||.||+...|+..+..+ ..+.++||+..|.- +.. ...-.+
T Consensus 55 ~~vtnQ~~SGrCW~FA~Ln~lr~~~~k~~~~~~felSq~Yl~f~dklEkaN~fle~ii~~~~~~~~~R~v~~ll~~~~~D 134 (437)
T cd00585 55 EPVTNQKSSGRCWLFAALNVLRHQFMKKLNLKEFEFSQSYLFFWDKLEKANYFLENIIETADEPLDDRLVQFLLANPQND 134 (437)
T ss_pred CCcccCCCCchhHHHHCHHHHHHHHHHHcCCCCEEeCcHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHhCCcCC
Confidence 4899999999999999999999987764 55679999876654 221 133456
Q ss_pred CCCCCc-hHHHHHHhCCcCCCCCCcccCC--C-------------------------CC--------cc-----------
Q psy7460 440 GCDGLE-QPIEYTHQAGLESEKDYPYRNG--N-------------------------GE--------KF----------- 472 (1026)
Q Consensus 440 G~~G~~-~a~~~~~~~Gi~~e~~ypY~~~--~-------------------------~~--------~~----------- 472 (1026)
| |.. .+...++++|++..+.||=+.. + +. ..
T Consensus 135 G--Gqw~m~~~li~KYGvVPk~~~pet~~s~~t~~~n~~L~~kLr~~a~~lr~~~~~~~~~~~l~~~~~~~~~~iy~il~ 212 (437)
T cd00585 135 G--GQWDMLVNLIEKYGLVPKSVMPESFNSENSRRLNYLLNRKLREDALELRKLVAKGASKEEIEAKKEEMLKEVYRILA 212 (437)
T ss_pred C--CchHHHHHHHHHcCCCcccccCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 6 666 8888899999999999984311 0 00 00
Q ss_pred cc-------------------------------------cc--------CCC----Cceeeecc-----------eeEec
Q psy7460 473 KC-------------------------------------AY--------DKS----KVKLFTGK-----------DFLYF 492 (1026)
Q Consensus 473 ~C-------------------------------------~~--------~~~----~~~~~~~~-----------~~~~~ 492 (1026)
.| .. ++. -.+.|.+. .|..+
T Consensus 213 ~~lG~pP~~F~~~y~dkd~~~~~~~~~TP~~F~~~yv~~~~~dyV~l~~~p~~~~p~~~~y~ve~~~Nv~~g~~~~y~Nv 292 (437)
T cd00585 213 IALGEPPEKFDWEYRDKDKKYHEIKELTPLEFYKKYVKFDLDDYVSLINDPRPDKPYNKLYTVEYLGNVVGGRPILYLNV 292 (437)
T ss_pred HHcCCCCceEEEEEEeCCCCeeeCCCcCHHHHHHHhcCCCccceEEEEeCCCCCCCCCceEEEecCCcccccccceEEec
Confidence 00 00 000 00000000 11111
Q ss_pred CCHHHHH----HHHHcCCCEEEEEecCccccccCCceeCCCC------------------CCCCCCCCeEEEEEEeeec-
Q psy7460 493 NGSETMK----KILYKYGPLSVGLNSHLIHFYNGTPIRKNDE------------------TCSPYDLGHAVLLVGYGKQ- 549 (1026)
Q Consensus 493 ~~~~~~~----~~l~~~gPv~v~i~~~~~~~y~~Gi~~~~~~------------------~c~~~~~~HaV~iVGyG~~- 549 (1026)
..+.|+ ++|.+++||.+++++..++.|++||+..... .|.....+|||+|||||.+
T Consensus 293 -p~d~l~~~~~~~L~~g~pV~~g~Dv~~~~~~k~GI~d~~~~~~~~~f~~~~~~~KaeRl~~~es~~tHAM~ivGv~~D~ 371 (437)
T cd00585 293 -PMDVLKKAAIAQLKDGEPVWFGCDVGKFSDRKSGILDTDLFDYELLFGIDFGLNKAERLDYGESLMTHAMVLTGVDLDE 371 (437)
T ss_pred -CHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCccccCcccchhhhcCccccCCHHHHHhhcCCcCCeEEEEEEEEecC
Confidence 345555 6778889999999998888999999932110 1444457999999999985
Q ss_pred CCc-cEEEEEcCCCCCCCCCcEEEEEec
Q psy7460 550 DDI-PYWLARNSWGPIGPDEGFFKIERG 576 (1026)
Q Consensus 550 ~g~-~YWivkNSWG~~WGe~Gy~ri~r~ 576 (1026)
+|+ .||+||||||+.||++|||+|.++
T Consensus 372 ~g~p~yw~VkNSWG~~~G~~Gy~~ms~~ 399 (437)
T cd00585 372 DGKPVKWKVENSWGEKVGKKGYFVMSDD 399 (437)
T ss_pred CCCcceEEEEcccCCCCCCCcceehhHH
Confidence 476 699999999999999999999886
No 36
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC). The proteins of this subfamily contain a large insert relative to the C1A peptidase (papain) subfamily. BH is a cysteine peptidase that detoxifies bleomycin by hydrolysis of an amide group. It acts as a carboxypeptidase on its C-terminus to convert itself into an aminopeptidase and peptide ligase. BH is found in all tissues in mammals as well as in many other eukaryotes. Bleomycin, a glycopeptide derived from the fungus Streptomyces verticullus, is an effective anticancer drug due to its ability to induce DNA strand breaks. Human BH is the major cause of tumor cell resistance to bleomycin chemotherapy, and is also genetically linked to Alzheimer's disease. In addition to its peptidase activity, the yeast BH (Gal6) binds DNA and acts as a repressor in the Gal4 regulatory system. BH forms a hexameric ring barrel structure w
Probab=99.76 E-value=5e-18 Score=194.66 Aligned_cols=186 Identities=22% Similarity=0.287 Sum_probs=131.8
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHh-cCCceecCHHHHHh----------------hcC------------CCCCCC
Q psy7460 755 GPAGDQAACGSCWAFSIAGMLEGQYAIK-TGKLVEFSKSQLVE----------------CAK------------QCSGCD 805 (1026)
Q Consensus 755 ~pv~dQg~CGSCWAfa~~~ale~~~~i~-~~~~~~lS~Q~lvd----------------C~~------------~~~gC~ 805 (1026)
.||+||+.-|-||.||+...|+..+..+ +.+.+.||+.+|.- +.. ...-.+
T Consensus 55 ~~vtnQ~~SGrCW~FA~Ln~lr~~~~k~~~~~~felSq~Yl~f~dklEkaN~fle~ii~~~~~~~~~R~v~~ll~~~~~D 134 (437)
T cd00585 55 EPVTNQKSSGRCWLFAALNVLRHQFMKKLNLKEFEFSQSYLFFWDKLEKANYFLENIIETADEPLDDRLVQFLLANPQND 134 (437)
T ss_pred CCcccCCCCchhHHHHCHHHHHHHHHHHcCCCCEEeCcHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHhCCcCC
Confidence 3899999999999999999999988764 55689999877654 210 134578
Q ss_pred CCCchHHHHHHHHcCCCCCCcccCcCCCCC-------------------------c---------c------------cc
Q psy7460 806 GCFFEPSIEYTHQAGLESEKDYPYKNANGE-------------------------K---------F------------KC 839 (1026)
Q Consensus 806 GG~~~~a~~y~~~~Gi~~e~~yPY~~~~~~-------------------------~---------~------------~C 839 (1026)
||.-..+...++++|++.++.||-+..... . . .|
T Consensus 135 GGqw~m~~~li~KYGvVPk~~~pet~~s~~t~~~n~~L~~kLr~~a~~lr~~~~~~~~~~~l~~~~~~~~~~iy~il~~~ 214 (437)
T cd00585 135 GGQWDMLVNLIEKYGLVPKSVMPESFNSENSRRLNYLLNRKLREDALELRKLVAKGASKEEIEAKKEEMLKEVYRILAIA 214 (437)
T ss_pred CCchHHHHHHHHHcCCCcccccCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999985421100 0 0 00
Q ss_pred cC-CC--------------------------------------------C----cceEEec-----------ceeeecCh
Q psy7460 840 AY-DK--------------------------------------------S----KVKLFTG-----------KDFLHFNG 859 (1026)
Q Consensus 840 ~~-~~--------------------------------------------~----~~~~~~~-----------~~~~~~~~ 859 (1026)
-- .+ . ..+.|.+ ..|..+ .
T Consensus 215 lG~pP~~F~~~y~dkd~~~~~~~~~TP~~F~~~yv~~~~~dyV~l~~~p~~~~p~~~~y~ve~~~Nv~~g~~~~y~Nv-p 293 (437)
T cd00585 215 LGEPPEKFDWEYRDKDKKYHEIKELTPLEFYKKYVKFDLDDYVSLINDPRPDKPYNKLYTVEYLGNVVGGRPILYLNV-P 293 (437)
T ss_pred cCCCCceEEEEEEeCCCCeeeCCCcCHHHHHHHhcCCCccceEEEEeCCCCCCCCCceEEEecCCcccccccceEEec-C
Confidence 00 00 0 0000000 011111 1
Q ss_pred HHHHH----HHHHhcCCEEEEEeCCCCcccCCcceeCCCC------------------CCCCCCCCeEEEEEEeeecC-C
Q psy7460 860 SETMK----KILYKYGPLSVLLNSDLIHDYNGTPIRKNDE------------------TCSPYDLGHAVLLVGYGKQD-N 916 (1026)
Q Consensus 860 ~~~ik----~~l~~~GPV~v~i~~~~f~~y~~Gi~~~~~~------------------~c~~~~~~HaV~iVGyg~~~-g 916 (1026)
.+.|+ ++|..++||.++++++.|..|++||+..... .|.....+|||+|||||.+. |
T Consensus 294 ~d~l~~~~~~~L~~g~pV~~g~Dv~~~~~~k~GI~d~~~~~~~~~f~~~~~~~KaeRl~~~es~~tHAM~ivGv~~D~~g 373 (437)
T cd00585 294 MDVLKKAAIAQLKDGEPVWFGCDVGKFSDRKSGILDTDLFDYELLFGIDFGLNKAERLDYGESLMTHAMVLTGVDLDEDG 373 (437)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEEcChhhccCCccccCcccchhhhcCccccCCHHHHHhhcCCcCCeEEEEEEEEecCCC
Confidence 34555 6778889999999998888999999954310 13344679999999999754 7
Q ss_pred c-cEEEEEcCCCCCCCCCcEEEEEec
Q psy7460 917 I-PYWLVRNSWGPIGPDEGFFKIERG 941 (1026)
Q Consensus 917 ~-~yWivkNSWG~~WGe~Gy~~i~r~ 941 (1026)
+ .||+||||||+.||++|||+|+++
T Consensus 374 ~p~yw~VkNSWG~~~G~~Gy~~ms~~ 399 (437)
T cd00585 374 KPVKWKVENSWGEKVGKKGYFVMSDD 399 (437)
T ss_pred CcceEEEEcccCCCCCCCcceehhHH
Confidence 6 699999999999999999999875
No 37
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of proteins belong to MEROPS peptidase family C1, sub-family C1B (bleomycin hydrolase, clan CA). This family contains prokaryotic and eukaryotic aminopeptidases and bleomycin hydrolases.; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis; PDB: 3PW3_F 2CB5_A 1CB5_C 2DZZ_A 2E02_A 2E01_A 2E03_A 1A6R_A 1GCB_A 3GCB_A ....
Probab=99.31 E-value=1.4e-11 Score=141.96 Aligned_cols=186 Identities=22% Similarity=0.317 Sum_probs=110.7
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcC-CCcccCHHHHHhh----------------cCC------------CCCCC
Q psy7460 24 GPAGDQADCGSCWAFSIAGMLEGQYAIKTG-KLVEFSKSQLVEC----------------AKQ------------CSGCD 74 (1026)
Q Consensus 24 ~pV~nQg~cGsCwAfA~~~~le~~~~i~~~-~~~~LS~q~l~~c----------------~~~------------~~gC~ 74 (1026)
.||.||..-|-||.||+...|+..+..+.+ +.++||.-+|.-- ... ....+
T Consensus 56 ~~vtnQk~SGRCW~FA~lN~lR~~~~kk~~l~~felSq~Yl~F~DKlEKaN~fLe~ii~~~~~~~d~R~v~~ll~~~~~D 135 (438)
T PF03051_consen 56 GPVTNQKSSGRCWLFAALNVLRHEIMKKLNLKDFELSQNYLFFWDKLEKANYFLENIIDTADEPLDDRLVRFLLKNPVSD 135 (438)
T ss_dssp -S--B--BSSTHHHHHHHHHHHHHHHHHCT-SS--B-HHHHHHHHHHHHHHHHHHHHHHCCTS-TTSHHHHHHHHSTT-S
T ss_pred CCCCCCCCCCCcchhhchHHHHHHHHHHcCCCceEeechHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHhcCCCC
Confidence 499999999999999999999999988776 6799999987521 110 13468
Q ss_pred CCChHHHHHHHHHcCCCCCCCcCCCCCCCCc--------------------------c----------------------
Q psy7460 75 GCFFEPSIEYTHQAGLESEKDYPYKNANGEK--------------------------F---------------------- 106 (1026)
Q Consensus 75 GG~~~~a~~~~~~~Gv~~e~~~PY~~~~~~~--------------------------~---------------------- 106 (1026)
||.-..+...++++||++.+.||-+...... .
T Consensus 136 GGqw~~~~nli~KYGvVPk~~mpet~~s~~t~~~n~~l~~~Lr~~a~~LR~~~~~~~~~~~l~~~k~~~l~~iy~il~~~ 215 (438)
T PF03051_consen 136 GGQWDMVVNLIKKYGVVPKSVMPETFSSSNTSEMNEMLNTKLREYALELRKLVKAGKSEEELRKLKEEMLAEIYRILAIY 215 (438)
T ss_dssp -B-HHHHHHHHHHH---BGGGSTTGCGCHBHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHcCcCcHhhCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999975422100 0
Q ss_pred --cCC--CC-----c--------------------------------------ccceeecccee---------eecC-cH
Q psy7460 107 --KCA--YD-----K--------------------------------------SKVKLFTGKDF---------LHFN-GS 129 (1026)
Q Consensus 107 --~c~--~~-----~--------------------------------------~~~~~~~~~~~---------~~~~-~~ 129 (1026)
.+| .. + ...+.+..... .+.+ ..
T Consensus 216 lG~PP~~F~~ey~dkd~~~~~~~~~TP~eF~~kyv~~~~ddyVsLin~P~~~~py~~~y~ve~~~Nv~~g~~~~ylNvpi 295 (438)
T PF03051_consen 216 LGEPPEKFTWEYRDKDKKYHRGKNYTPLEFYKKYVGFDLDDYVSLINDPRSHHPYNKLYTVEYLGNVVGGRPVRYLNVPI 295 (438)
T ss_dssp H---SSSEEEEEE-TTS-EEEEEEE-HHHHHHHCTTS-GGGEEEEE--T-TTS-TTCEEEETTTTSSTT-EEEEEEE--H
T ss_pred cCCCChheeEEEeccccccccccccCchhHHHHHhCCCCcceEEEeeCCCccCccceeEEEccCCCEECCcceeEeccCH
Confidence 000 00 0 00000100000 0000 12
Q ss_pred ----HHHHHHHHhcCCcEEEEecccccccCCceeecCCCC------------------CCCCCCCcEEEEEEeee-cCCc
Q psy7460 130 ----ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET------------------CSPYDLGHAVLLVGYGK-QDNI 186 (1026)
Q Consensus 130 ----~~ik~~I~~~GPV~~~i~~~~~~~y~~gi~~~~~~~------------------~~~~~~~HAV~IVGyG~-~~g~ 186 (1026)
+.+.+.|.++-||-.+-++..+.+.+.|+....... ......+|||+|+|... ++|+
T Consensus 296 d~lk~~~i~~Lk~G~~VwfgcDV~k~~~~k~Gi~D~~~~d~~~~fg~~~~~~K~~Rl~~~eS~~tHAM~itGv~~D~~g~ 375 (438)
T PF03051_consen 296 DELKDAAIKSLKAGYPVWFGCDVGKFFDRKNGIMDTDLYDYDSLFGVDFNMSKAERLDYGESTMTHAMVITGVDLDEDGK 375 (438)
T ss_dssp HHHHHHHHHHHHTT--EEEEEETTTTEETTTTEE-TTSB-HHHHHT--S-S-HHHHHHTTSS--EEEEEEEEEEE-TTSS
T ss_pred HHHHHHHHHHHHcCCcEEEeccCCccccccchhhccchhhhhhhhccccccCHHHHHHhCCCCCceeEEEEEEEeccCCC
Confidence 456668888999999999866666677776532100 12234679999999997 5665
Q ss_pred -cEEEEEcCCCCCCCCCcEEEEEe
Q psy7460 187 -PYWLVRNSWGPIGPDEGFFKIER 209 (1026)
Q Consensus 187 -~yWIVrNSWG~~WG~~Gyf~i~~ 209 (1026)
.+|+|+||||+..|.+|||.|..
T Consensus 376 p~~wkVeNSWG~~~g~kGy~~msd 399 (438)
T PF03051_consen 376 PVRWKVENSWGTDNGDKGYFYMSD 399 (438)
T ss_dssp EEEEEEE-SBTTTSTBTTEEEEEH
T ss_pred eeEEEEEcCCCCCCCCCcEEEECH
Confidence 69999999999999999999975
No 38
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of proteins belong to MEROPS peptidase family C1, sub-family C1B (bleomycin hydrolase, clan CA). This family contains prokaryotic and eukaryotic aminopeptidases and bleomycin hydrolases.; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis; PDB: 3PW3_F 2CB5_A 1CB5_C 2DZZ_A 2E02_A 2E01_A 2E03_A 1A6R_A 1GCB_A 3GCB_A ....
Probab=99.22 E-value=5.6e-11 Score=136.99 Aligned_cols=186 Identities=22% Similarity=0.343 Sum_probs=109.6
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHhcC-CceecCHHHHH----------------hhcC------------CCCCCC
Q psy7460 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTG-KLVEFSKSQLV----------------ECAK------------QCSGCD 805 (1026)
Q Consensus 755 ~pv~dQg~CGSCWAfa~~~ale~~~~i~~~-~~~~lS~Q~lv----------------dC~~------------~~~gC~ 805 (1026)
.||.||..-|-||.||+...|+..+..+.+ +...||+-+|. ++.. ...-.+
T Consensus 56 ~~vtnQk~SGRCW~FA~lN~lR~~~~kk~~l~~felSq~Yl~F~DKlEKaN~fLe~ii~~~~~~~d~R~v~~ll~~~~~D 135 (438)
T PF03051_consen 56 GPVTNQKSSGRCWLFAALNVLRHEIMKKLNLKDFELSQNYLFFWDKLEKANYFLENIIDTADEPLDDRLVRFLLKNPVSD 135 (438)
T ss_dssp -S--B--BSSTHHHHHHHHHHHHHHHHHCT-SS--B-HHHHHHHHHHHHHHHHHHHHHHCCTS-TTSHHHHHHHHSTT-S
T ss_pred CCCCCCCCCCCcchhhchHHHHHHHHHHcCCCceEeechHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHhcCCCC
Confidence 399999999999999999999999987765 67999998765 3221 023468
Q ss_pred CCCchHHHHHHHHcCCCCCCcccCcCCCCCcc------------------------------------------------
Q psy7460 806 GCFFEPSIEYTHQAGLESEKDYPYKNANGEKF------------------------------------------------ 837 (1026)
Q Consensus 806 GG~~~~a~~y~~~~Gi~~e~~yPY~~~~~~~~------------------------------------------------ 837 (1026)
||.-..+..-++++||+..+.||-+.....+.
T Consensus 136 GGqw~~~~nli~KYGvVPk~~mpet~~s~~t~~~n~~l~~~Lr~~a~~LR~~~~~~~~~~~l~~~k~~~l~~iy~il~~~ 215 (438)
T PF03051_consen 136 GGQWDMVVNLIKKYGVVPKSVMPETFSSSNTSEMNEMLNTKLREYALELRKLVKAGKSEEELRKLKEEMLAEIYRILAIY 215 (438)
T ss_dssp -B-HHHHHHHHHHH---BGGGSTTGCGCHBHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHcCcCcHhhCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888889999999999998643211000
Q ss_pred --ccc-------------------------------CCC--------------CcceEEecc-----------eeeecCh
Q psy7460 838 --KCA-------------------------------YDK--------------SKVKLFTGK-----------DFLHFNG 859 (1026)
Q Consensus 838 --~C~-------------------------------~~~--------------~~~~~~~~~-----------~~~~~~~ 859 (1026)
.++ .+. ...+.+.+. .|..++-
T Consensus 216 lG~PP~~F~~ey~dkd~~~~~~~~~TP~eF~~kyv~~~~ddyVsLin~P~~~~py~~~y~ve~~~Nv~~g~~~~ylNvpi 295 (438)
T PF03051_consen 216 LGEPPEKFTWEYRDKDKKYHRGKNYTPLEFYKKYVGFDLDDYVSLINDPRSHHPYNKLYTVEYLGNVVGGRPVRYLNVPI 295 (438)
T ss_dssp H---SSSEEEEEE-TTS-EEEEEEE-HHHHHHHCTTS-GGGEEEEE--T-TTS-TTCEEEETTTTSSTT-EEEEEEE--H
T ss_pred cCCCChheeEEEeccccccccccccCchhHHHHHhCCCCcceEEEeeCCCccCccceeEEEccCCCEECCcceeEeccCH
Confidence 000 000 000000000 0111110
Q ss_pred ---HHHHHHHHHhcCCEEEEEeCCCCcccCCcceeCCCCC------------------CCCCCCCeEEEEEEeee-cCCc
Q psy7460 860 ---SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET------------------CSPYDLGHAVLLVGYGK-QDNI 917 (1026)
Q Consensus 860 ---~~~ik~~l~~~GPV~v~i~~~~f~~y~~Gi~~~~~~~------------------c~~~~~~HaV~iVGyg~-~~g~ 917 (1026)
.+.+.++|..+-||-.+-+++.+...+.||....... ......+|||+|||... ++|+
T Consensus 296 d~lk~~~i~~Lk~G~~VwfgcDV~k~~~~k~Gi~D~~~~d~~~~fg~~~~~~K~~Rl~~~eS~~tHAM~itGv~~D~~g~ 375 (438)
T PF03051_consen 296 DELKDAAIKSLKAGYPVWFGCDVGKFFDRKNGIMDTDLYDYDSLFGVDFNMSKAERLDYGESTMTHAMVITGVDLDEDGK 375 (438)
T ss_dssp HHHHHHHHHHHHTT--EEEEEETTTTEETTTTEE-TTSB-HHHHHT--S-S-HHHHHHTTSS--EEEEEEEEEEE-TTSS
T ss_pred HHHHHHHHHHHHcCCcEEEeccCCccccccchhhccchhhhhhhhccccccCHHHHHHhCCCCCceeEEEEEEEeccCCC
Confidence 2455567777779999999987777788887543100 01134589999999997 5665
Q ss_pred -cEEEEEcCCCCCCCCCcEEEEEe
Q psy7460 918 -PYWLVRNSWGPIGPDEGFFKIER 940 (1026)
Q Consensus 918 -~yWivkNSWG~~WGe~Gy~~i~r 940 (1026)
.+|+|+||||+..|.+|||.|+.
T Consensus 376 p~~wkVeNSWG~~~g~kGy~~msd 399 (438)
T PF03051_consen 376 PVRWKVENSWGTDNGDKGYFYMSD 399 (438)
T ss_dssp EEEEEEE-SBTTTSTBTTEEEEEH
T ss_pred eeEEEEEcCCCCCCCCCcEEEECH
Confidence 59999999999999999999986
No 39
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. This entry represents a peptidase inhibitor domain, which belongs to MEROPS peptidase inhibitor family I29. The domain is also found at the N terminus of a variety of peptidase precursors that belong to MEROPS peptidase subfamily C1A; these include cathepsin L, papain, and procaricain (P10056 from SWISSPROT) []. It forms an alpha-helical domain that runs through the substrate-binding site, preventing access. Removal of this region by proteolytic cleavage results in activation of the enzyme. This domain is also found, in one or more copies, in a variety of cysteine peptidase inhibitors such as salarin [].; PDB: 3QT4_A 3QJ3_A 2C0Y_A 2L95_A 1CJL_A 1CS8_A 7PCK_A 1BY8_A 1PCI_A 2O6X_A ....
Probab=99.09 E-value=1.1e-10 Score=97.11 Aligned_cols=49 Identities=37% Similarity=0.644 Sum_probs=41.1
Q ss_pred HHHHHHHhCCCCCChHHHHHHHHHHHhccc---------CCCcccccccCCCCCHHHH
Q psy7460 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGH---------KKHERYGTSEFSDRSPEEI 340 (1026)
Q Consensus 292 f~~f~~~~~k~Y~~~~E~~~R~~~F~~n~~---------~~~~~~g~n~fsD~t~eEf 340 (1026)
|++|+++|+|.|.+.+|+..|+.+|++|++ ..++++|+|+|||||++||
T Consensus 1 F~~~~~~~~k~Y~~~~e~~~R~~~F~~N~~~I~~~N~~~~~~~~~~~N~fsD~t~eEf 58 (58)
T PF08246_consen 1 FEQFKKKYGKSYKSAEEEARRFAIFKENLRRIEEHNANGNNTYKLGLNQFSDMTPEEF 58 (58)
T ss_dssp HHHHHHHCT---SSHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEE-SSTTTTSSHHHH
T ss_pred CHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEeCccccCcChhhC
Confidence 899999999999999999999999999953 4567889999999999998
No 40
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. This entry represents a peptidase inhibitor domain, which belongs to MEROPS peptidase inhibitor family I29. The domain is also found at the N terminus of a variety of peptidase precursors that belong to MEROPS peptidase subfamily C1A; these include cathepsin L, papain, and procaricain (P10056 from SWISSPROT) []. It forms an alpha-helical domain that runs through the substrate-binding site, preventing access. Removal of this region by proteolytic cleavage results in activation of the enzyme. This domain is also found, in one or more copies, in a variety of cysteine peptidase inhibitors such as salarin [].; PDB: 3QT4_A 3QJ3_A 2C0Y_A 2L95_A 1CJL_A 1CS8_A 7PCK_A 1BY8_A 1PCI_A 2O6X_A ....
Probab=99.05 E-value=2.5e-10 Score=95.00 Aligned_cols=49 Identities=39% Similarity=0.680 Sum_probs=40.3
Q ss_pred HHHHHHHhCCcCCCHHHHHHHHHHHHHhh-----h----CCCcccccCcCCCCCHHHH
Q psy7460 658 FKAFIVKRGRQYANDEEIKERFEYFKQDG-----H----KKHERYGTSEFSDRSPEEI 706 (1026)
Q Consensus 658 f~~f~~~~~k~Y~~~~E~~~R~~iF~~N~-----~----~~~~~~giN~faD~t~eEf 706 (1026)
|++|+++|+|.|.+.+|+..|+.+|++|+ + ..++++|||+|||||++||
T Consensus 1 F~~~~~~~~k~Y~~~~e~~~R~~~F~~N~~~I~~~N~~~~~~~~~~~N~fsD~t~eEf 58 (58)
T PF08246_consen 1 FEQFKKKYGKSYKSAEEEARRFAIFKENLRRIEEHNANGNNTYKLGLNQFSDMTPEEF 58 (58)
T ss_dssp HHHHHHHCT---SSHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEE-SSTTTTSSHHHH
T ss_pred CHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEeCccccCcChhhC
Confidence 88999999999999999999999999996 1 2356789999999999997
No 41
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29). This domain is found at the N-terminus of some C1 peptidases such as Cathepsin L where it acts as a propeptide. There are also a number of proteins that are composed solely of multiple copies of this domain such as the peptidase inhibitor salarin. This family is classified as I29 by MEROPS. Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a s
Probab=98.71 E-value=8.2e-09 Score=85.53 Aligned_cols=48 Identities=33% Similarity=0.578 Sum_probs=43.0
Q ss_pred HHHHHHHhCCCCCChHHHHHHHHHHHhccc---------CCCcccccccCCCCCHHH
Q psy7460 292 FKAFIVKRGRQYANDEEIKERFEYFKQDGH---------KKHERYGTSEFSDRSPEE 339 (1026)
Q Consensus 292 f~~f~~~~~k~Y~~~~E~~~R~~~F~~n~~---------~~~~~~g~n~fsD~t~eE 339 (1026)
|++|+.+|+|.|.+.+|...|+.+|++|++ ..++++|+|+|||||++|
T Consensus 1 f~~~~~~~~k~y~~~~e~~~r~~~f~~n~~~i~~~N~~~~~~~~~~~N~fsDlt~eE 57 (57)
T smart00848 1 FEQWKKKYGKSYSSEEEELRRFEIFKENLKFIEEHNKKNDHSYTLGLNQFADLTNEE 57 (57)
T ss_pred ChHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEecCcccccCCCCC
Confidence 688999999999999999999999999953 246788999999999886
No 42
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29). This domain is found at the N-terminus of some C1 peptidases such as Cathepsin L where it acts as a propeptide. There are also a number of proteins that are composed solely of multiple copies of this domain such as the peptidase inhibitor salarin. This family is classified as I29 by MEROPS. Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a s
Probab=98.68 E-value=1.3e-08 Score=84.28 Aligned_cols=48 Identities=35% Similarity=0.616 Sum_probs=42.3
Q ss_pred HHHHHHHhCCcCCCHHHHHHHHHHHHHhh-----h----CCCcccccCcCCCCCHHH
Q psy7460 658 FKAFIVKRGRQYANDEEIKERFEYFKQDG-----H----KKHERYGTSEFSDRSPEE 705 (1026)
Q Consensus 658 f~~f~~~~~k~Y~~~~E~~~R~~iF~~N~-----~----~~~~~~giN~faD~t~eE 705 (1026)
|++|+.+|+|.|.+..|+..|+.+|++|+ + ..++++|+|+|||||++|
T Consensus 1 f~~~~~~~~k~y~~~~e~~~r~~~f~~n~~~i~~~N~~~~~~~~~~~N~fsDlt~eE 57 (57)
T smart00848 1 FEQWKKKYGKSYSSEEEELRRFEIFKENLKFIEEHNKKNDHSYTLGLNQFADLTNEE 57 (57)
T ss_pred ChHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEecCcccccCCCCC
Confidence 67899999999999999999999999996 1 145678999999999886
No 43
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism]
Probab=98.25 E-value=5.8e-06 Score=88.88 Aligned_cols=76 Identities=17% Similarity=0.276 Sum_probs=56.1
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHcC-CCcccCHHHHHhhcC----------------------------CCCCCCC
Q psy7460 25 PAGDQADCGSCWAFSIAGMLEGQYAIKTG-KLVEFSKSQLVECAK----------------------------QCSGCDG 75 (1026)
Q Consensus 25 pV~nQg~cGsCwAfA~~~~le~~~~i~~~-~~~~LS~q~l~~c~~----------------------------~~~gC~G 75 (1026)
||-||..-|-||-||+.-++--.+.-.-+ +.+.||..++.--++ ...--+|
T Consensus 59 ~vtNQk~SGRCWmFAAlNtfRhk~~~el~le~fElSQaytfFwDKlEKaN~FleqIi~tadq~ldsRlv~~LL~~PqqDG 138 (444)
T COG3579 59 KVTNQKQSGRCWMFAALNTFRHKLISELKLEDFELSQAYTFFWDKLEKANWFLEQIIETADQELDSRLVSFLLATPQQDG 138 (444)
T ss_pred ccccccccceehHHHHHHHHHHHHHHhcCcceeehhhHHHHHHHHHHHhhHHHHHHHhhcccchHHHHHHHHHcCccccC
Confidence 89999999999999998877655543333 457888776532221 0123468
Q ss_pred CChHHHHHHHHHcCCCCCCCcCCCC
Q psy7460 76 CFFEPSIEYTHQAGLESEKDYPYKN 100 (1026)
Q Consensus 76 G~~~~a~~~~~~~Gv~~e~~~PY~~ 100 (1026)
|--......+.++|+++-++||-..
T Consensus 139 GQwdM~v~l~eKYGvVpK~~ypes~ 163 (444)
T COG3579 139 GQWDMFVSLFEKYGVVPKSVYPESF 163 (444)
T ss_pred chHHHHHHHHHHhCCCchhhccccc
Confidence 8888888889999999999998653
No 44
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism]
Probab=97.70 E-value=0.00017 Score=77.89 Aligned_cols=74 Identities=18% Similarity=0.219 Sum_probs=50.1
Q ss_pred HHhcCCEEEEEeCCCCcccCCcceeCCCC------------------CCCCCCCCeEEEEEEeeec-CC-ccEEEEEcCC
Q psy7460 867 LYKYGPLSVLLNSDLIHDYNGTPIRKNDE------------------TCSPYDLGHAVLLVGYGKQ-DN-IPYWLVRNSW 926 (1026)
Q Consensus 867 l~~~GPV~v~i~~~~f~~y~~Gi~~~~~~------------------~c~~~~~~HaV~iVGyg~~-~g-~~yWivkNSW 926 (1026)
+..+-||=.+-++..+..-+.||..-.-- ..+.....|||+|.|.+.+ +| .-=|.|.|||
T Consensus 308 ~qagetVwFG~dvgq~s~rk~Gimdtd~~~~~s~~g~~~~q~KA~RldY~eSLmTHAMvlTGvd~d~~g~p~rwkVENSW 387 (444)
T COG3579 308 MQAGETVWFGCDVGQLSDRKTGIMDTDIYDYESSLGINLTQDKAGRLDYGESLMTHAMVLTGVDLDETGNPLRWKVENSW 387 (444)
T ss_pred HhcCCcEEeecCchhhcccccceeeehhccchhhhCCCcccchhhccccchHHHHHHHHhhccccccCCCceeeEeeccc
Confidence 33445777777776666666666432100 0011235699999999854 33 3479999999
Q ss_pred CCCCCCCcEEEEEe
Q psy7460 927 GPIGPDEGFFKIER 940 (1026)
Q Consensus 927 G~~WGe~Gy~~i~r 940 (1026)
|..=|.+|||-++-
T Consensus 388 G~d~G~~GyfvaSd 401 (444)
T COG3579 388 GKDVGKKGYFVASD 401 (444)
T ss_pred ccccCCCceEeehH
Confidence 99999999998763
No 45
>KOG4128|consensus
Probab=95.30 E-value=0.016 Score=62.95 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=58.0
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcC-CCcccCHHHHHhhc--------------------CC----------CCC
Q psy7460 24 GPAGDQADCGSCWAFSIAGMLEGQYAIKTG-KLVEFSKSQLVECA--------------------KQ----------CSG 72 (1026)
Q Consensus 24 ~pV~nQg~cGsCwAfA~~~~le~~~~i~~~-~~~~LS~q~l~~c~--------------------~~----------~~g 72 (1026)
.||.||..-|-||.|+.+..|---+..+-+ ..++||..+|+--+ .. +..
T Consensus 63 ~pvtnqkssGrcWift~ln~lrl~~~~kLnl~eFElSqayLFFwdKlErcnyFL~~vvd~a~r~ep~DgRlvq~Ll~nP~ 142 (457)
T KOG4128|consen 63 QPVTNQKSSGRCWIFTGLNLLRLEMDRKLNLPEFELSQAYLFFWDKLERCNYFLWTVVDLAMRCEPLDGRLVQNLLKNPV 142 (457)
T ss_pred cccccCcCCCceEEEechhHHHHHHHhcCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHhCCC
Confidence 599999999999999998877665555544 45889998764221 10 123
Q ss_pred CCCCChHHHHHHHHHcCCCCCCCcCCC
Q psy7460 73 CDGCFFEPSIEYTHQAGLESEKDYPYK 99 (1026)
Q Consensus 73 C~GG~~~~a~~~~~~~Gv~~e~~~PY~ 99 (1026)
-+||.-...++.++++|+.+..|||-.
T Consensus 143 ~DGGqw~MfvNlVkKYGviPKkcy~~s 169 (457)
T KOG4128|consen 143 PDGGQWQMFVNLVKKYGVIPKKCYLHS 169 (457)
T ss_pred CCCchHHHHHHHHHHhCCCcHHhcccc
Confidence 469999999999999999999999753
No 46
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the peptidase family C47 (staphopain family, clan CA). The type example are the staphopains, which are one of four major families of proteinases secreted by the Gram-positive Staphylococcus aureus. These staphylococcal cysteine proteases are secreted as preproenzymes that are proteolytically cleaved to generate the mature enzyme [, , ].; GO: 0008234 cysteine-type peptidase activity, 0006508 proteolysis; PDB: 1X9Y_D 1Y4H_B 1PXV_B 1CV8_A.
Probab=95.25 E-value=0.13 Score=51.80 Aligned_cols=128 Identities=18% Similarity=0.225 Sum_probs=74.2
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHH--------HHcCCCcccCHHHHHhhcCCCCCCCCCChHHHHHHHHHcCCCCCCCcCC
Q psy7460 27 GDQADCGSCWAFSIAGMLEGQYA--------IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPY 98 (1026)
Q Consensus 27 ~nQg~cGsCwAfA~~~~le~~~~--------i~~~~~~~LS~q~l~~c~~~~~gC~GG~~~~a~~~~~~~Gv~~e~~~PY 98 (1026)
..||.-+-|-+||.+++|-.... |++.-...+|.++|.+++ -.+...++|.+..|....
T Consensus 17 EtQg~~pWCa~Ya~aailN~~~~~~~~~A~~iMr~~yPn~s~~~l~~~~--------~~~~~~i~y~ks~g~~~~----- 83 (175)
T PF05543_consen 17 ETQGYNPWCAGYAMAAILNATTNTKIYNAKDIMRYLYPNVSEEQLKFTS--------LTPNQMIKYAKSQGRNPQ----- 83 (175)
T ss_dssp ---SSSS-HHHHHHHHHHHHHCT-S---HHHHHHHHSTTS-CCCHHH----------B-HHHHHHHHHHTTEEEE-----
T ss_pred eccCcCcHHHHHHHHHHHHhhhCcCcCCHHHHHHHHCCCCCHHHHhhcC--------CCHHHHHHHHHHcCcchh-----
Confidence 46899999999999888875521 222223556666665543 345678888886664321
Q ss_pred CCCCCCcccCCCCcccceeeccceeeecCcHHHHHHHHHhcCCcEEEEecccccccCCceeecCCCCCCCCCCCcEEEEE
Q psy7460 99 KNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 178 (1026)
Q Consensus 99 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ik~~I~~~GPV~~~i~~~~~~~y~~gi~~~~~~~~~~~~~~HAV~IV 178 (1026)
......+.++++++|.++-|+.+....-. .......+|||+||
T Consensus 84 -----------------------~~n~~~s~~eV~~~~~~nk~i~i~~~~v~--------------~~~~~~~gHAlavv 126 (175)
T PF05543_consen 84 -----------------------YNNRMPSFDEVKKLIDNNKGIAILADRVE--------------QTNGPHAGHALAVV 126 (175)
T ss_dssp -----------------------EECS---HHHHHHHHHTT-EEEEEEEETT--------------SCTTB--EEEEEEE
T ss_pred -----------------------HhcCCCCHHHHHHHHHcCCCeEEEecccc--------------cCCCCccceeEEEE
Confidence 11111256899999999999887665311 11223579999999
Q ss_pred Eeee-cCCccEEEEEcCCCCCCCCCcEEEEEe
Q psy7460 179 GYGK-QDNIPYWLVRNSWGPIGPDEGFFKIER 209 (1026)
Q Consensus 179 GyG~-~~g~~yWIVrNSWG~~WG~~Gyf~i~~ 209 (1026)
||-. .+|.++.++-|-| +++++-+.-
T Consensus 127 Gya~~~~g~~~y~~WNPW-----~~~~~~~sa 153 (175)
T PF05543_consen 127 GYAKPNNGQKTYYFWNPW-----WNDVMIQSA 153 (175)
T ss_dssp EEEEETTSEEEEEEE-TT------SS-EEEET
T ss_pred eeeecCCCCeEEEEeCCc-----cCCcEEEec
Confidence 9987 5669999999999 445555544
No 47
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A.
Probab=94.15 E-value=0.2 Score=48.80 Aligned_cols=58 Identities=26% Similarity=0.415 Sum_probs=34.6
Q ss_pred CcHHHHHHHHHhcCCcEEEEecccccccCCceeecCCCCCCCCCCCcEEEEEEeeecCCccEEEEEcCC
Q psy7460 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 195 (1026)
Q Consensus 127 ~~~~~ik~~I~~~GPV~~~i~~~~~~~y~~gi~~~~~~~~~~~~~~HAV~IVGyG~~~g~~yWIVrNSW 195 (1026)
.+.+.|+++|.++.||.+.+....-.. .+..+. ....+|.|+|+||..+. +++|-.+|
T Consensus 87 ~~~~~i~~~i~~G~Pvi~~~~~~~~~~-~~~~~~-------~~~~~H~vvi~Gy~~~~---~~~v~DP~ 144 (144)
T PF13529_consen 87 ASFDDIKQEIDAGRPVIVSVNSGWRPP-NGDGYD-------GTYGGHYVVIIGYDEDG---YVYVNDPW 144 (144)
T ss_dssp S-HHHHHHHHHTT--EEEEEETTSS---TTEEEE-------E-TTEEEEEEEEE-SSE----EEEE-TT
T ss_pred CcHHHHHHHHHCCCcEEEEEEcccccC-CCCCcC-------CCcCCEEEEEEEEeCCC---EEEEeCCC
Confidence 356899999999999999997421110 111111 22479999999995533 78888877
No 48
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the peptidase family C47 (staphopain family, clan CA). The type example are the staphopains, which are one of four major families of proteinases secreted by the Gram-positive Staphylococcus aureus. These staphylococcal cysteine proteases are secreted as preproenzymes that are proteolytically cleaved to generate the mature enzyme [, , ].; GO: 0008234 cysteine-type peptidase activity, 0006508 proteolysis; PDB: 1X9Y_D 1Y4H_B 1PXV_B 1CV8_A.
Probab=93.52 E-value=0.52 Score=47.63 Aligned_cols=118 Identities=19% Similarity=0.249 Sum_probs=69.3
Q ss_pred CCCCCcchHHHHhHHHHHHHHH--------HHcCCCccCCHHHHHhhhcCCCCCCCCCCCc-hHHHHHHhCCcCCCCCCc
Q psy7460 393 DQAACGSCWAFSIAGMLEGQYA--------IKTGKLVEFSKSQLVECAKQCSGCGGCDGLE-QPIEYTHQAGLESEKDYP 463 (1026)
Q Consensus 393 ~Qg~CgSCwAfa~~~~~e~~~~--------i~~~~~~~lS~q~lvdC~~~~~gC~G~~G~~-~a~~~~~~~Gi~~e~~yp 463 (1026)
.||.=+=|-+|+.++.|-.... |.+.-...+|+++|.+++. .+ ..++|.+..|....
T Consensus 18 tQg~~pWCa~Ya~aailN~~~~~~~~~A~~iMr~~yPn~s~~~l~~~~~----------~~~~~i~y~ks~g~~~~---- 83 (175)
T PF05543_consen 18 TQGYNPWCAGYAMAAILNATTNTKIYNAKDIMRYLYPNVSEEQLKFTSL----------TPNQMIKYAKSQGRNPQ---- 83 (175)
T ss_dssp --SSSS-HHHHHHHHHHHHHCT-S---HHHHHHHHSTTS-CCCHHH--B-----------HHHHHHHHHHTTEEEE----
T ss_pred ccCcCcHHHHHHHHHHHHhhhCcCcCCHHHHHHHHCCCCCHHHHhhcCC----------CHHHHHHHHHHcCcchh----
Confidence 4787788999999998876522 2222346788899887742 23 66777765443210
Q ss_pred ccCCCCCccccccCCCCceeeecceeEecCCHHHHHHHHHcCCCEEEEEecCccccccCCceeCCCCCCCCCCCCeEEEE
Q psy7460 464 YRNGNGEKFKCAYDKSKVKLFTGKDFLYFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLL 543 (1026)
Q Consensus 464 Y~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gPv~v~i~~~~~~~y~~Gi~~~~~~~c~~~~~~HaV~i 543 (1026)
......+-+++++++-++-||.+-.+.- . .......+||++|
T Consensus 84 ------------------------~~n~~~s~~eV~~~~~~nk~i~i~~~~v-------------~-~~~~~~~gHAlav 125 (175)
T PF05543_consen 84 ------------------------YNNRMPSFDEVKKLIDNNKGIAILADRV-------------E-QTNGPHAGHALAV 125 (175)
T ss_dssp ------------------------EECS---HHHHHHHHHTT-EEEEEEEET-------------T-SCTTB--EEEEEE
T ss_pred ------------------------HhcCCCCHHHHHHHHHcCCCeEEEeccc-------------c-cCCCCccceeEEE
Confidence 0111225788999999888888766531 1 1123357999999
Q ss_pred EEeee-cCCccEEEEEcCCC
Q psy7460 544 VGYGK-QDDIPYWLARNSWG 562 (1026)
Q Consensus 544 VGyG~-~~g~~YWivkNSWG 562 (1026)
|||-. .+|.+|.++=|-|-
T Consensus 126 vGya~~~~g~~~y~~WNPW~ 145 (175)
T PF05543_consen 126 VGYAKPNNGQKTYYFWNPWW 145 (175)
T ss_dssp EEEEEETTSEEEEEEE-TT-
T ss_pred EeeeecCCCCeEEEEeCCcc
Confidence 99987 56789999988874
No 49
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A.
Probab=91.90 E-value=1.3 Score=42.98 Aligned_cols=57 Identities=26% Similarity=0.427 Sum_probs=33.4
Q ss_pred hHHHHHHHHHhcCCEEEEEeCCCCcccCCcceeCCCCCCCCCCCCeEEEEEEeeecCCccEEEEEcCC
Q psy7460 859 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 926 (1026)
Q Consensus 859 ~~~~ik~~l~~~GPV~v~i~~~~f~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSW 926 (1026)
+.+.|+++|.+..||.+.+....-.. ....+.. ....|.|+|+||..+. +++|..+|
T Consensus 88 ~~~~i~~~i~~G~Pvi~~~~~~~~~~-~~~~~~~-------~~~~H~vvi~Gy~~~~---~~~v~DP~ 144 (144)
T PF13529_consen 88 SFDDIKQEIDAGRPVIVSVNSGWRPP-NGDGYDG-------TYGGHYVVIIGYDEDG---YVYVNDPW 144 (144)
T ss_dssp -HHHHHHHHHTT--EEEEEETTSS---TTEEEEE--------TTEEEEEEEEE-SSE----EEEE-TT
T ss_pred cHHHHHHHHHCCCcEEEEEEcccccC-CCCCcCC-------CcCCEEEEEEEEeCCC---EEEEeCCC
Confidence 46899999998889999997421000 1122221 2468999999996533 78887766
No 50
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate.
Probab=72.75 E-value=10 Score=40.13 Aligned_cols=64 Identities=27% Similarity=0.409 Sum_probs=38.5
Q ss_pred cHHHHHHHHHhcCCcEEEEecccccc--cCCceeecCCCCC---CCCCCCcEEEEEEeeecCCccEEEEEc
Q psy7460 128 GSETMKKILYKYGPLSVLLNSDLIHD--YNGTPIRKNDETC---SPYDLGHAVLLVGYGKQDNIPYWLVRN 193 (1026)
Q Consensus 128 ~~~~ik~~I~~~GPV~~~i~~~~~~~--y~~gi~~~~~~~~---~~~~~~HAV~IVGyG~~~g~~yWIVrN 193 (1026)
+.++|...|.++||+.+.++...+.= -+..........| .....||-|+|+||+... +-+++||
T Consensus 112 s~~ei~~hl~~g~~aIvLVd~~~L~C~~Ck~~~~~~~~~~~~~~~~~Y~GHYVVlcGyd~~~--~~~~yrd 180 (212)
T PF09778_consen 112 SIQEIIEHLSSGGPAIVLVDASLLHCDLCKSNCFDPIGSKCFGRSPDYQGHYVVLCGYDAAT--KEFEYRD 180 (212)
T ss_pred cHHHHHHHHhCCCcEEEEEccccccChhhcccccccccccccCCCCCccEEEEEEEeecCCC--CeEEEeC
Confidence 67899999999998888887654430 0111111101111 234678999999996543 2355554
No 51
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate.
Probab=64.55 E-value=23 Score=37.53 Aligned_cols=57 Identities=25% Similarity=0.388 Sum_probs=35.2
Q ss_pred CHHHHHHHHHcCCCEEEEEecCccc--cccCCceeCCCCCCC---CCCCCeEEEEEEeeecC
Q psy7460 494 GSETMKKILYKYGPLSVGLNSHLIH--FYNGTPIRKNDETCS---PYDLGHAVLLVGYGKQD 550 (1026)
Q Consensus 494 ~~~~~~~~l~~~gPv~v~i~~~~~~--~y~~Gi~~~~~~~c~---~~~~~HaV~iVGyG~~~ 550 (1026)
+.++|...|..+||+.+-+++..+. .-+.-.+.+....|- +.-.+|.|+|+||..+.
T Consensus 112 s~~ei~~hl~~g~~aIvLVd~~~L~C~~Ck~~~~~~~~~~~~~~~~~Y~GHYVVlcGyd~~~ 173 (212)
T PF09778_consen 112 SIQEIIEHLSSGGPAIVLVDASLLHCDLCKSNCFDPIGSKCFGRSPDYQGHYVVLCGYDAAT 173 (212)
T ss_pred cHHHHHHHHhCCCcEEEEEccccccChhhcccccccccccccCCCCCccEEEEEEEeecCCC
Confidence 6889999999999888888875332 112222111112222 22349999999997653
No 52
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase
Probab=57.19 E-value=16 Score=41.25 Aligned_cols=55 Identities=15% Similarity=0.211 Sum_probs=35.7
Q ss_pred cHHHHHHHHHhcCCcEEEEecccccccCCceeecCCCCCCCCCCCcEEEEEEeeecCCccEEEE
Q psy7460 128 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 191 (1026)
Q Consensus 128 ~~~~ik~~I~~~GPV~~~i~~~~~~~y~~gi~~~~~~~~~~~~~~HAV~IVGyG~~~g~~yWIV 191 (1026)
..+.|+++|.++.||.+.++.-.+.++.. .+ .....+|.|+|+||+++ +..+.++
T Consensus 77 ~~~~l~~~l~~g~pv~~~~D~~~lpy~~~-~~-------~~~~~~H~i~v~G~d~~-~~~~~v~ 131 (317)
T PF14399_consen 77 AWEELKEALDAGRPVIVWVDMYYLPYRPN-YY-------KKHHADHYIVVYGYDEE-EDVFYVS 131 (317)
T ss_pred HHHHHHHHHhCCCceEEEeccccCCCCcc-cc-------ccccCCcEEEEEEEeCC-CCEEEEE
Confidence 35688999998889999876544322211 11 22346899999999654 3345554
No 53
>cd00044 CysPc Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Probab=52.49 E-value=33 Score=38.90 Aligned_cols=29 Identities=24% Similarity=0.439 Sum_probs=25.2
Q ss_pred CCCCcEEEEEEeeecC--CccEEEEEcCCCC
Q psy7460 169 YDLGHAVLLVGYGKQD--NIPYWLVRNSWGP 197 (1026)
Q Consensus 169 ~~~~HAV~IVGyG~~~--g~~yWIVrNSWG~ 197 (1026)
...+||=.|++.-.-+ +.+.-.+||.||.
T Consensus 233 l~~~HaY~Vl~~~~~~~~~~~lv~lrNPWg~ 263 (315)
T cd00044 233 LVKGHAYSVLDVREVQEEGLRLLRLRNPWGV 263 (315)
T ss_pred cccCcceEEeEEEEEccCceEEEEecCCccC
Confidence 4569999999998766 8899999999994
No 54
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase
Probab=50.78 E-value=36 Score=38.27 Aligned_cols=56 Identities=16% Similarity=0.276 Sum_probs=35.9
Q ss_pred HHHHHHHHHcCCCEEEEEecCccccccCCceeCCCCCCCCCCCCeEEEEEEeeecCCccEEEEEc
Q psy7460 495 SETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLARN 559 (1026)
Q Consensus 495 ~~~~~~~l~~~gPv~v~i~~~~~~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyG~~~g~~YWivkN 559 (1026)
.+.|++.|.++.||.+.++...+- |...-+ .....+|.|+|+||+.+ +..|.|+-+
T Consensus 78 ~~~l~~~l~~g~pv~~~~D~~~lp-y~~~~~-------~~~~~~H~i~v~G~d~~-~~~~~v~D~ 133 (317)
T PF14399_consen 78 WEELKEALDAGRPVIVWVDMYYLP-YRPNYY-------KKHHADHYIVVYGYDEE-EDVFYVSDP 133 (317)
T ss_pred HHHHHHHHhCCCceEEEeccccCC-CCcccc-------ccccCCcEEEEEEEeCC-CCEEEEEcC
Confidence 457888888777999998864322 222111 12235899999999754 345667643
No 55
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.60 E-value=28 Score=35.59 Aligned_cols=48 Identities=25% Similarity=0.410 Sum_probs=35.9
Q ss_pred CcHHHHHHHHHhcCCcEEEEecccccccCCceeecCCCCCCCCCCCcEEEEEEeeecCCccEEEEEcCCC
Q psy7460 127 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 196 (1026)
Q Consensus 127 ~~~~~ik~~I~~~GPV~~~i~~~~~~~y~~gi~~~~~~~~~~~~~~HAV~IVGyG~~~g~~yWIVrNSWG 196 (1026)
.++.+||..|.++.||.+.... |.. .--|+|+|.||++. |+..-++||
T Consensus 121 ksl~~ik~ql~kg~PV~iw~T~--~~~----------------~s~H~v~itgyDk~----n~yynDpyG 168 (195)
T COG4990 121 KSLSDIKGQLLKGRPVVIWVTN--FHS----------------YSIHSVLITGYDKY----NIYYNDPYG 168 (195)
T ss_pred CcHHHHHHHHhcCCcEEEEEec--ccc----------------cceeeeEeeccccc----ceEeccccc
Confidence 4789999999999999876654 321 23799999999654 466666774
No 56
>KOG4128|consensus
Probab=45.67 E-value=18 Score=40.16 Aligned_cols=76 Identities=22% Similarity=0.358 Sum_probs=53.4
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHhcC-CceecCHHHHHh------h--------------cC----------CCCC
Q psy7460 755 GPAGDQAACGSCWAFSIAGMLEGQYAIKTG-KLVEFSKSQLVE------C--------------AK----------QCSG 803 (1026)
Q Consensus 755 ~pv~dQg~CGSCWAfa~~~ale~~~~i~~~-~~~~lS~Q~lvd------C--------------~~----------~~~g 803 (1026)
+||.||..-|-||.|+.+..|---+..+-+ +...||..+|.- | .. .+.-
T Consensus 63 ~pvtnqkssGrcWift~ln~lrl~~~~kLnl~eFElSqayLFFwdKlErcnyFL~~vvd~a~r~ep~DgRlvq~Ll~nP~ 142 (457)
T KOG4128|consen 63 QPVTNQKSSGRCWIFTGLNLLRLEMDRKLNLPEFELSQAYLFFWDKLERCNYFLWTVVDLAMRCEPLDGRLVQNLLKNPV 142 (457)
T ss_pred cccccCcCCCceEEEechhHHHHHHHhcCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHhCCC
Confidence 599999999999999999876544443322 346678766532 1 11 1233
Q ss_pred CCCCCchHHHHHHHHcCCCCCCcccCc
Q psy7460 804 CDGCFFEPSIEYTHQAGLESEKDYPYK 830 (1026)
Q Consensus 804 C~GG~~~~a~~y~~~~Gi~~e~~yPY~ 830 (1026)
=+||.-..-...++++|+....|||-.
T Consensus 143 ~DGGqw~MfvNlVkKYGviPKkcy~~s 169 (457)
T KOG4128|consen 143 PDGGQWQMFVNLVKKYGVIPKKCYLHS 169 (457)
T ss_pred CCCchHHHHHHHHHHhCCCcHHhcccc
Confidence 468877777777899999999999754
No 57
>PF12385 Peptidase_C70: Papain-like cysteine protease AvrRpt2; InterPro: IPR022118 This is a family of cysteine proteases, found in actinobacteria, protobacteria and firmicutes. Papain-like cysteine proteases play a crucial role in plant-pathogen/pest interactions. On entering the host they act on non-self substrates, thereby manipulating the host to evade proteolysis []. AvrRpt2 from Pseudomonas syringae pv tomato DC3000 triggers resistance to P. syringae-2-dependent defence responses, including hypersensitive cell death, by cleaving the Arabidopsis RIN4 protein which is monitored by the cognate resistance protein RPS2 [].
Probab=40.92 E-value=2.6e+02 Score=28.29 Aligned_cols=110 Identities=16% Similarity=0.232 Sum_probs=59.1
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHHHhcCCceecCHHHHHhhc-CCCCCCCCCCchHHHHHHHHcCCCCCCcccCcCC
Q psy7460 754 TGPAGDQAACGSCWAFSIAGMLEGQYAIKTGKLVEFSKSQLVECA-KQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNA 832 (1026)
Q Consensus 754 v~pv~dQg~CGSCWAfa~~~ale~~~~i~~~~~~~lS~Q~lvdC~-~~~~gC~GG~~~~a~~y~~~~Gi~~e~~yPY~~~ 832 (1026)
|+-|..|..--+|||-+++-..-.+ .....+-.++|.+|. ....+=.+|. ...+++..-|+..-
T Consensus 24 v~~v~Qq~~~mgCWaA~~~Mv~~w~-----~~~prlg~~eLyra~~Glp~~lq~g~--d~~~~~~~~gl~~v-------- 88 (166)
T PF12385_consen 24 VPYVPQQNTRMGCWAACACMVGGWR-----DQGPRLGPPELYRADEGLPSQLQDGL--DPEDFIRNEGLKEV-------- 88 (166)
T ss_pred eeeeccCCCcccHHHHHHHHHHHHh-----cCCCCCCcHHHHHHhcCCchhhcccc--cHHHHHHhcCcccc--------
Confidence 5556656555699997665432211 112367778888884 2122222222 22344443333110
Q ss_pred CCCcccccCCCCcceEEecceeeecChHHHHHHHHHhcCCEEEEEeCCCCcccCCcceeCCCCCCCCCCCCeEEEEEEee
Q psy7460 833 NGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 912 (1026)
Q Consensus 833 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i~~~~f~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyg 912 (1026)
.. +.. ..| ..+.+...|.++||+-+++.+. +..-..|+++|.|-.
T Consensus 89 ~~--------P~~------~~~----t~e~~~~LL~~yGPLwv~~~~P-----------------~~~~~~H~~ViTGI~ 133 (166)
T PF12385_consen 89 PE--------PAN------ASY----TAEGLANLLREYGPLWVAWEAP-----------------GDSWVAHASVITGID 133 (166)
T ss_pred CC--------Ccc------ccc----CHHHHHHHHHHcCCeEEEecCC-----------------CCcceeeEEEEEeec
Confidence 00 000 011 3578999999999999986442 112246999999875
Q ss_pred e
Q psy7460 913 K 913 (1026)
Q Consensus 913 ~ 913 (1026)
.
T Consensus 134 ~ 134 (166)
T PF12385_consen 134 G 134 (166)
T ss_pred C
Confidence 4
No 58
>PF12385 Peptidase_C70: Papain-like cysteine protease AvrRpt2; InterPro: IPR022118 This is a family of cysteine proteases, found in actinobacteria, protobacteria and firmicutes. Papain-like cysteine proteases play a crucial role in plant-pathogen/pest interactions. On entering the host they act on non-self substrates, thereby manipulating the host to evade proteolysis []. AvrRpt2 from Pseudomonas syringae pv tomato DC3000 triggers resistance to P. syringae-2-dependent defence responses, including hypersensitive cell death, by cleaving the Arabidopsis RIN4 protein which is monitored by the cognate resistance protein RPS2 [].
Probab=37.81 E-value=3.1e+02 Score=27.70 Aligned_cols=39 Identities=26% Similarity=0.440 Sum_probs=29.2
Q ss_pred CHHHHHHHHHcCCCEEEEEecCccccccCCceeCCCCCCCCCCCCeEEEEEEeeec
Q psy7460 494 GSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 549 (1026)
Q Consensus 494 ~~~~~~~~l~~~gPv~v~i~~~~~~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyG~~ 549 (1026)
..+.+.+.|.++|||-+++... ++.-..|+++|.|-..+
T Consensus 97 t~e~~~~LL~~yGPLwv~~~~P-----------------~~~~~~H~~ViTGI~~d 135 (166)
T PF12385_consen 97 TAEGLANLLREYGPLWVAWEAP-----------------GDSWVAHASVITGIDGD 135 (166)
T ss_pred CHHHHHHHHHHcCCeEEEecCC-----------------CCcceeeEEEEEeecCC
Confidence 4688999999999999986541 11224699999998654
No 59
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A. Cathepsin B are lysosomal cysteine proteinases belonging to the papain superfamily and are unique in their ability to act as both an endo- and an exopeptidases. They are synthesized as inactive zymogens. Activation of the peptidases occurs with the removal of the propeptide [, ]. ; GO: 0004197 cysteine-type endopeptidase activity, 0050790 regulation of catalytic activity; PDB: 1MIR_A 1PBH_A 2PBH_A 3PBH_A.
Probab=32.80 E-value=24 Score=27.16 Aligned_cols=32 Identities=25% Similarity=0.154 Sum_probs=16.2
Q ss_pred HHhcccCCCcc--cccccCCCCCHHHHhhhcCCCC
Q psy7460 316 FKQDGHKKHER--YGTSEFSDRSPEEILCKTGFKW 348 (1026)
Q Consensus 316 F~~n~~~~~~~--~g~n~fsD~t~eEf~~~~~~~~ 348 (1026)
|.+.||+.+.+ -|.| |.+.|.+.++.++|...
T Consensus 5 ~I~~IN~~~~tWkAG~N-F~~~~~~~ik~LlGv~~ 38 (41)
T PF08127_consen 5 FIDYINSKNTTWKAGRN-FENTSIEYIKRLLGVLP 38 (41)
T ss_dssp HHHHHHHCT-SEEE-----SSB-HHHHHHCS-B-T
T ss_pred HHHHHHcCCCcccCCCC-CCCCCHHHHHHHcCCCC
Confidence 34444444444 4899 89999999998888754
No 60
>cd02549 Peptidase_C39A A sub-family of peptidase family C39. Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins (mostly non-lantibiotic). The cleavage is mediated by the transporter as part of the secretion process. Bacteriocins are antibiotic proteins secreted by some species of bacteria that inhibit the growth of other bacterial species. The bacteriocin is synthesized as a precursor with an N-terminal leader peptide, and processing involves removal of the leader peptide by cleavage at a Gly-Gly bond, followed by translocation of the mature bacteriocin across the cytoplasmic membrane. Most endopeptidases of family C39 are N-terminal domains in larger proteins (ABC transporters) that serve both functions. The proposed protease active site is conserved in this sub-family of proteins with a single peptidase domain, which are
Probab=32.49 E-value=92 Score=30.05 Aligned_cols=45 Identities=24% Similarity=0.280 Sum_probs=31.3
Q ss_pred HHHHHHhcCCcEEEEecccccccCCceeecCCCCCCCCCCCcEEEEEEeeecCCccEEEEEcCC
Q psy7460 132 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 195 (1026)
Q Consensus 132 ik~~I~~~GPV~~~i~~~~~~~y~~gi~~~~~~~~~~~~~~HAV~IVGyG~~~g~~yWIVrNSW 195 (1026)
++++|.+..||.+.+... . .....+|.|+|+||. .....+|.+.|
T Consensus 70 ~~~~l~~~~Pvi~~~~~~-------~---------~~~~~gH~vVv~g~~---~~~~~~i~DP~ 114 (141)
T cd02549 70 LLRQLAAGHPVIVSVNLG-------V---------SITPSGHAMVVIGYD---RKGNVYVNDPG 114 (141)
T ss_pred HHHHHHCCCeEEEEEecC-------c---------ccCCCCeEEEEEEEc---CCCCEEEECCC
Confidence 888999999999887641 0 112368999999995 12236667765
No 61
>cd00044 CysPc Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Probab=28.35 E-value=1.5e+02 Score=33.51 Aligned_cols=27 Identities=26% Similarity=0.467 Sum_probs=23.9
Q ss_pred CCeEEEEEEeeecC--CccEEEEEcCCCC
Q psy7460 537 LGHAVLLVGYGKQD--DIPYWLARNSWGP 563 (1026)
Q Consensus 537 ~~HaV~iVGyG~~~--g~~YWivkNSWG~ 563 (1026)
.+||-.|++.-+-+ +.+.-.+||.||.
T Consensus 235 ~~HaY~Vl~~~~~~~~~~~lv~lrNPWg~ 263 (315)
T cd00044 235 KGHAYSVLDVREVQEEGLRLLRLRNPWGV 263 (315)
T ss_pred cCcceEEeEEEEEccCceEEEEecCCccC
Confidence 49999999998766 8899999999995
No 62
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.13 E-value=1.2e+02 Score=31.22 Aligned_cols=48 Identities=25% Similarity=0.410 Sum_probs=34.4
Q ss_pred ChHHHHHHHHHhcCCEEEEEeCCCCcccCCcceeCCCCCCCCCCCCeEEEEEEeeecCCccEEEEEcCCC
Q psy7460 858 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 927 (1026)
Q Consensus 858 ~~~~~ik~~l~~~GPV~v~i~~~~f~~y~~Gi~~~~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG 927 (1026)
++..+|+..|.+..||.+-... |.. ..-|+|+|+||++. |+..-++||
T Consensus 121 ksl~~ik~ql~kg~PV~iw~T~--~~~----------------~s~H~v~itgyDk~----n~yynDpyG 168 (195)
T COG4990 121 KSLSDIKGQLLKGRPVVIWVTN--FHS----------------YSIHSVLITGYDKY----NIYYNDPYG 168 (195)
T ss_pred CcHHHHHHHHhcCCcEEEEEec--ccc----------------cceeeeEeeccccc----ceEeccccc
Confidence 3588999999998999876643 221 23699999999754 456666664
Done!