Query psy7461
Match_columns 149
No_of_seqs 125 out of 1023
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 18:56:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7461.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7461hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1o5x_A TIM, triosephosphate is 100.0 5.3E-62 1.8E-66 395.6 18.2 148 1-148 1-149 (248)
2 3th6_A Triosephosphate isomera 100.0 4.9E-62 1.7E-66 396.0 17.5 148 1-148 1-149 (249)
3 1r2r_A TIM, triosephosphate is 100.0 2.5E-61 8.4E-66 391.7 18.1 148 1-148 2-149 (248)
4 2i9e_A Triosephosphate isomera 100.0 1.9E-61 6.5E-66 394.2 17.3 148 1-148 1-148 (259)
5 3qst_A Triosephosphate isomera 100.0 3.2E-61 1.1E-65 392.4 17.6 147 2-148 4-151 (255)
6 1b9b_A TIM, protein (triosepho 100.0 4.6E-61 1.6E-65 391.3 17.0 148 1-148 1-150 (255)
7 4g1k_A Triosephosphate isomera 100.0 3E-61 1E-65 395.3 15.8 147 2-148 25-174 (272)
8 3ta6_A Triosephosphate isomera 100.0 2.4E-61 8.2E-66 395.1 15.0 148 1-148 1-154 (267)
9 3krs_A Triosephosphate isomera 100.0 6.3E-61 2.2E-65 393.2 17.2 147 1-148 22-172 (271)
10 1ney_A TIM, triosephosphate is 100.0 1.2E-60 4.1E-65 387.4 18.3 147 2-148 1-148 (247)
11 2vxn_A Triosephosphate isomera 100.0 1.3E-60 4.3E-65 388.1 17.9 146 2-148 4-150 (251)
12 2yc6_A Triosephosphate isomera 100.0 2E-60 6.8E-65 388.0 18.4 147 1-148 2-150 (257)
13 3kxq_A Triosephosphate isomera 100.0 3.3E-61 1.1E-65 395.4 13.8 147 2-148 25-174 (275)
14 2j27_A Triosephosphate isomera 100.0 1.6E-60 5.4E-65 387.3 17.6 146 2-148 3-149 (250)
15 3m9y_A Triosephosphate isomera 100.0 1.2E-60 4.1E-65 388.8 16.4 146 2-148 2-152 (254)
16 1mo0_A TIM, triosephosphate is 100.0 2.6E-60 8.8E-65 390.1 18.4 147 2-148 22-168 (275)
17 1tre_A Triosephosphate isomera 100.0 1.8E-60 6.1E-65 387.9 16.1 147 2-148 1-149 (255)
18 1yya_A Triosephosphate isomera 100.0 3E-60 1E-64 385.6 17.0 147 2-148 1-148 (250)
19 1aw2_A Triosephosphate isomera 100.0 2.1E-60 7.1E-65 387.7 15.5 147 2-148 1-151 (256)
20 1m6j_A TIM, TPI, triosephospha 100.0 3.1E-60 1.1E-64 387.7 13.9 147 1-148 2-156 (261)
21 2btm_A TIM, protein (triosepho 100.0 1.7E-59 5.9E-64 381.5 16.3 146 3-148 1-148 (252)
22 2jgq_A Triosephosphate isomera 100.0 1.8E-58 6.1E-63 372.0 11.5 142 4-148 1-145 (233)
23 3s6d_A Putative triosephosphat 100.0 4.1E-58 1.4E-62 381.7 12.3 147 2-148 34-207 (310)
24 2v5b_A Triosephosphate isomera 100.0 1E-53 3.6E-58 346.2 13.0 139 2-148 4-143 (244)
25 1hg3_A Triosephosphate isomera 100.0 1.4E-44 4.9E-49 289.7 10.7 127 2-134 4-132 (225)
26 1w0m_A TIM, triosephosphate is 100.0 1.6E-44 5.5E-49 289.6 9.9 127 2-134 1-129 (226)
27 2h6r_A Triosephosphate isomera 100.0 1.4E-35 4.9E-40 235.3 8.8 123 6-134 2-126 (219)
28 2p10_A MLL9387 protein; putati 98.2 5.7E-07 1.9E-11 73.9 2.9 72 56-134 93-178 (286)
29 1i4n_A Indole-3-glycerol phosp 95.6 0.064 2.2E-06 42.9 8.8 110 5-131 41-162 (251)
30 3tsm_A IGPS, indole-3-glycerol 89.7 1.5 5E-05 35.3 8.1 79 36-129 96-179 (272)
31 3igs_A N-acetylmannosamine-6-p 85.7 11 0.00036 29.2 11.3 99 17-128 35-138 (232)
32 3q58_A N-acetylmannosamine-6-p 82.2 15 0.00052 28.2 11.5 99 17-128 35-138 (229)
33 1geq_A Tryptophan synthase alp 80.2 16 0.00055 27.6 9.6 44 76-127 98-141 (248)
34 3tha_A Tryptophan synthase alp 77.6 2.8 9.4E-05 33.4 4.6 51 76-134 106-157 (252)
35 1pii_A N-(5'phosphoribosyl)ant 74.6 11 0.00038 32.3 7.9 76 41-131 94-169 (452)
36 1wv2_A Thiazole moeity, thiazo 73.7 5.3 0.00018 32.2 5.3 65 67-132 78-149 (265)
37 2qiw_A PEP phosphonomutase; st 66.0 11 0.00037 29.8 5.5 54 36-95 182-238 (255)
38 3civ_A Endo-beta-1,4-mannanase 65.4 14 0.00049 30.1 6.3 54 70-124 47-115 (343)
39 3nav_A Tryptophan synthase alp 64.5 13 0.00044 29.6 5.8 50 76-133 115-165 (271)
40 1zlp_A PSR132, petal death pro 64.2 5.3 0.00018 32.8 3.5 61 35-101 202-265 (318)
41 3tfx_A Orotidine 5'-phosphate 62.6 20 0.00069 28.4 6.5 77 35-118 157-238 (259)
42 1rdu_A Conserved hypothetical 61.4 10 0.00035 25.6 4.1 44 74-129 50-93 (116)
43 1eo1_A Hypothetical protein MT 60.5 10 0.00035 25.9 4.0 45 74-130 53-97 (124)
44 1fob_A Beta-1,4-galactanase; B 60.2 16 0.00054 29.5 5.6 48 78-126 32-80 (334)
45 3vnd_A TSA, tryptophan synthas 60.1 18 0.0006 28.7 5.8 50 76-133 113-163 (267)
46 1xg4_A Probable methylisocitra 57.8 17 0.00059 29.3 5.4 61 35-101 180-243 (295)
47 1hjs_A Beta-1,4-galactanase; 4 57.4 25 0.00084 28.4 6.4 48 78-126 32-80 (332)
48 1vc4_A Indole-3-glycerol phosp 56.6 11 0.00037 29.6 3.9 73 43-131 94-166 (254)
49 4e8d_A Glycosyl hydrolase, fam 53.6 18 0.00063 32.2 5.3 49 79-127 38-92 (595)
50 2re2_A Uncharacterized protein 53.3 15 0.0005 26.0 3.9 45 74-131 67-111 (136)
51 3qja_A IGPS, indole-3-glycerol 53.2 39 0.0013 26.7 6.7 45 79-129 128-172 (272)
52 4h41_A Putative alpha-L-fucosi 53.1 14 0.00049 30.5 4.3 58 79-136 60-130 (340)
53 2ktr_A Sequestosome-1; autopha 53.0 5.2 0.00018 28.4 1.4 49 66-116 4-70 (117)
54 2yx6_A Hypothetical protein PH 51.2 18 0.00061 24.6 3.9 41 77-129 54-94 (121)
55 2whl_A Beta-mannanase, baman5; 46.8 53 0.0018 25.2 6.6 52 78-129 36-87 (294)
56 1jfx_A 1,4-beta-N-acetylmurami 45.2 27 0.00093 26.2 4.5 47 72-121 12-58 (217)
57 3jr2_A Hexulose-6-phosphate sy 45.1 25 0.00085 26.3 4.2 96 15-127 16-118 (218)
58 3f4w_A Putative hexulose 6 pho 44.5 43 0.0015 24.4 5.5 100 5-124 3-108 (211)
59 1o13_A Probable NIFB protein; 44.3 24 0.00083 24.8 3.8 41 77-129 67-107 (136)
60 1bqc_A Protein (beta-mannanase 43.2 78 0.0027 24.3 7.0 52 77-128 36-87 (302)
61 3d3a_A Beta-galactosidase; pro 43.2 32 0.0011 30.5 5.2 49 79-127 43-97 (612)
62 3ve9_A Orotidine-5'-phosphate 42.8 60 0.0021 24.7 6.2 80 36-128 129-210 (215)
63 3thd_A Beta-galactosidase; TIM 42.4 37 0.0013 30.6 5.5 51 78-128 45-101 (654)
64 3vni_A Xylose isomerase domain 40.3 99 0.0034 23.1 7.1 66 59-127 3-68 (294)
65 2x8r_A Glycosyl hydrolase; pep 40.2 26 0.00088 26.3 3.6 48 72-122 11-58 (210)
66 1ur4_A Galactanase; hydrolase, 40.2 52 0.0018 27.5 5.8 50 77-126 52-109 (399)
67 2nzl_A Hydroxyacid oxidase 1; 39.2 70 0.0024 26.5 6.5 50 79-129 266-316 (392)
68 3pzy_A MOG; ssgcid, seattle st 37.8 51 0.0017 23.8 4.8 61 75-143 29-89 (164)
69 2g0t_A Conserved hypothetical 37.1 96 0.0033 25.5 6.9 64 58-126 51-126 (350)
70 1tqj_A Ribulose-phosphate 3-ep 36.6 65 0.0022 24.4 5.5 43 78-126 77-119 (230)
71 2nli_A Lactate oxidase; flavoe 36.4 68 0.0023 26.3 5.9 50 79-129 243-293 (368)
72 3ru6_A Orotidine 5'-phosphate 36.3 1.3E+02 0.0043 24.3 7.4 76 35-117 171-251 (303)
73 2wag_A Lysozyme, putative; hyd 35.7 37 0.0013 25.7 3.9 48 72-122 23-70 (220)
74 1tg7_A Beta-galactosidase; TIM 35.3 32 0.0011 32.3 4.1 49 79-127 42-96 (971)
75 2wfb_A Putative uncharacterize 34.6 31 0.0011 23.3 3.0 41 75-127 56-96 (120)
76 3iix_A Biotin synthetase, puta 33.8 64 0.0022 25.2 5.2 56 79-134 145-211 (348)
77 3tty_A Beta-GAL, beta-galactos 32.8 65 0.0022 28.6 5.5 48 78-127 28-81 (675)
78 2wje_A CPS4B, tyrosine-protein 32.5 61 0.0021 24.4 4.7 35 82-121 129-163 (247)
79 2pjk_A 178AA long hypothetical 31.5 82 0.0028 23.0 5.1 63 75-144 42-105 (178)
80 3cdw_H Protein 3B, VPG; RNA-de 30.9 13 0.00044 19.6 0.4 8 71-78 1-8 (26)
81 3jug_A Beta-mannanase; TIM-bar 30.7 1.2E+02 0.0043 24.4 6.6 52 78-129 59-110 (345)
82 1svd_M Ribulose bisphosphate c 30.0 54 0.0018 22.8 3.6 22 103-124 22-43 (110)
83 1kwg_A Beta-galactosidase; TIM 30.0 89 0.0031 27.2 5.9 46 79-126 20-71 (645)
84 2wje_A CPS4B, tyrosine-protein 29.4 52 0.0018 24.8 3.8 46 79-125 154-201 (247)
85 2hjp_A Phosphonopyruvate hydro 29.2 66 0.0023 25.7 4.5 50 45-101 193-243 (290)
86 2fyw_A Conserved hypothetical 28.9 64 0.0022 25.2 4.3 12 83-94 195-206 (267)
87 3rfq_A Pterin-4-alpha-carbinol 28.9 86 0.003 23.3 4.9 63 75-144 51-113 (185)
88 1nmo_A Hypothetical protein YB 28.7 39 0.0013 26.2 3.0 24 73-96 191-217 (247)
89 1rbl_M Ribulose 1,5 bisphospha 28.4 46 0.0016 23.1 3.0 22 103-124 20-41 (109)
90 3sgz_A Hydroxyacid oxidase 2; 28.4 1.5E+02 0.0052 24.3 6.7 50 79-129 231-281 (352)
91 1wdd_S Ribulose bisphosphate c 28.4 58 0.002 23.3 3.6 25 103-127 21-45 (128)
92 1mkz_A Molybdenum cofactor bio 28.3 1.2E+02 0.004 21.9 5.5 48 76-129 31-79 (172)
93 3u7v_A Beta-galactosidase; str 28.0 86 0.0029 27.6 5.4 44 80-125 80-128 (552)
94 2ze3_A DFA0005; organic waste 28.0 31 0.0011 27.4 2.4 71 35-119 181-254 (275)
95 3lmz_A Putative sugar isomeras 28.0 1.8E+02 0.0061 21.4 7.7 33 58-93 18-50 (257)
96 1ece_A Endocellulase E1; glyco 27.2 1.4E+02 0.0047 23.3 6.1 50 78-127 49-116 (358)
97 3hmc_A Putative prophage lambd 27.0 46 0.0016 24.6 3.0 46 72-121 12-57 (192)
98 3aof_A Endoglucanase; glycosyl 27.0 1.8E+02 0.0062 22.1 6.7 54 76-129 36-97 (317)
99 1gox_A (S)-2-hydroxy-acid oxid 26.7 1.1E+02 0.0037 24.9 5.6 51 78-129 238-289 (370)
100 3zxw_B Ribulose bisphosphate c 26.5 51 0.0018 23.2 3.0 22 103-124 19-40 (118)
101 2yyb_A Hypothetical protein TT 26.3 54 0.0018 25.3 3.4 13 83-95 199-211 (242)
102 1eix_A Orotidine 5'-monophosph 26.2 2.1E+02 0.0073 21.6 6.9 21 78-102 206-226 (245)
103 1wky_A Endo-beta-1,4-mannanase 26.1 1.8E+02 0.006 24.3 6.9 51 78-128 44-94 (464)
104 1r30_A Biotin synthase; SAM ra 26.0 82 0.0028 25.2 4.6 65 69-134 153-226 (369)
105 1y5e_A Molybdenum cofactor bio 25.7 1.1E+02 0.0036 22.0 4.8 62 75-143 33-95 (169)
106 3lp5_A Putative cell surface h 25.4 32 0.0011 26.4 2.0 14 84-97 94-108 (250)
107 2ob3_A Parathion hydrolase; me 25.1 28 0.00096 27.7 1.6 16 112-127 53-68 (330)
108 1a88_A Chloroperoxidase L; hal 25.0 36 0.0012 24.7 2.1 16 81-96 81-97 (275)
109 2nzl_A Hydroxyacid oxidase 1; 24.8 2.3E+02 0.0077 23.3 7.2 45 43-94 293-337 (392)
110 1xm7_A Hypothetical protein AQ 24.8 43 0.0015 24.0 2.5 21 80-100 133-153 (195)
111 3t7v_A Methylornithine synthas 24.8 75 0.0026 25.1 4.1 66 75-142 148-226 (350)
112 1ehy_A Protein (soluble epoxid 24.7 38 0.0013 25.2 2.3 17 80-96 91-108 (294)
113 1bwv_S Rubisco, protein (ribul 24.5 74 0.0025 23.0 3.6 22 103-124 14-35 (138)
114 1a8s_A Chloroperoxidase F; hal 24.1 41 0.0014 24.3 2.3 17 80-96 78-95 (273)
115 3eoo_A Methylisocitrate lyase; 23.8 52 0.0018 26.6 2.9 75 35-119 184-261 (298)
116 1a8q_A Bromoperoxidase A1; hal 23.7 42 0.0014 24.2 2.3 17 80-96 78-95 (274)
117 1gk8_I Ribulose bisphosphate c 23.6 78 0.0027 23.0 3.6 23 103-125 21-43 (140)
118 1kbi_A Cytochrome B2, L-LCR; f 23.6 2.2E+02 0.0077 24.3 7.2 51 79-129 357-412 (511)
119 3nco_A Endoglucanase fncel5A; 23.3 2.2E+02 0.0075 21.8 6.6 59 71-129 39-105 (320)
120 1mzw_B U4/U6 snRNP 60KDA prote 23.2 41 0.0014 18.2 1.6 16 99-114 14-29 (31)
121 2yys_A Proline iminopeptidase- 22.9 44 0.0015 24.9 2.3 16 81-96 88-104 (286)
122 1p4c_A L(+)-mandelate dehydrog 22.9 88 0.003 25.6 4.3 49 78-129 238-287 (380)
123 1s2w_A Phosphoenolpyruvate pho 22.8 81 0.0028 25.2 4.0 51 44-101 196-246 (295)
124 3v48_A Aminohydrolase, putativ 22.6 45 0.0015 24.4 2.3 17 80-96 74-91 (268)
125 1r3d_A Conserved hypothetical 22.6 42 0.0015 24.5 2.1 17 80-96 74-93 (264)
126 1wom_A RSBQ, sigma factor SIGB 22.6 45 0.0015 24.4 2.3 17 80-96 82-99 (271)
127 3fa4_A 2,3-dimethylmalate lyas 22.4 62 0.0021 26.2 3.2 78 35-121 183-263 (302)
128 1u2e_A 2-hydroxy-6-ketonona-2, 22.0 44 0.0015 24.6 2.1 17 80-96 99-116 (289)
129 3ovp_A Ribulose-phosphate 3-ep 21.9 81 0.0028 24.0 3.6 41 79-127 80-120 (228)
130 2ekc_A AQ_1548, tryptophan syn 21.9 1.7E+02 0.006 22.4 5.7 44 76-127 112-155 (262)
131 1q0r_A RDMC, aclacinomycin met 21.9 48 0.0016 24.6 2.3 17 80-96 86-103 (298)
132 1zxx_A 6-phosphofructokinase; 21.8 51 0.0018 26.8 2.6 39 90-130 66-104 (319)
133 2is8_A Molybdopterin biosynthe 21.8 1.2E+02 0.0041 21.6 4.4 62 76-144 24-86 (164)
134 1zoi_A Esterase; alpha/beta hy 21.7 37 0.0013 24.7 1.6 17 80-96 81-98 (276)
135 1azw_A Proline iminopeptidase; 21.6 48 0.0017 24.5 2.3 16 81-96 95-111 (313)
136 1olt_A Oxygen-independent copr 21.6 1.3E+02 0.0044 25.0 5.1 57 78-134 155-223 (457)
137 2wfl_A Polyneuridine-aldehyde 21.5 49 0.0017 24.2 2.3 16 81-96 71-88 (264)
138 3ldv_A Orotidine 5'-phosphate 21.0 1.9E+02 0.0065 22.5 5.7 64 35-105 175-242 (255)
139 3fj0_A Beta-glucosidase; BGLB, 21.0 1.7E+02 0.0057 24.9 5.7 48 80-127 86-140 (465)
140 3rpc_A Possible metal-dependen 20.9 1.1E+02 0.0039 22.9 4.3 39 74-112 206-244 (264)
141 3pa8_A Toxin B; CLAN CD cystei 20.9 50 0.0017 26.3 2.3 58 78-135 93-162 (254)
142 2wue_A 2-hydroxy-6-OXO-6-pheny 20.9 47 0.0016 24.8 2.1 16 81-96 99-115 (291)
143 3ho6_A Toxin A; inositol phosp 20.8 79 0.0027 25.4 3.4 57 79-135 97-165 (267)
144 4f0h_B Ribulose bisphosphate c 20.6 98 0.0034 22.4 3.6 22 103-124 14-35 (138)
145 1j1i_A META cleavage compound 20.6 46 0.0016 24.8 2.0 17 80-96 97-115 (296)
146 1gnx_A Beta-glucosidase; hydro 20.4 1.5E+02 0.0052 25.2 5.4 47 80-126 78-131 (479)
147 4dbe_A Orotidine 5'-phosphate 20.4 2.8E+02 0.0095 20.9 6.8 41 78-121 172-212 (222)
148 2xua_A PCAD, 3-oxoadipate ENOL 20.4 54 0.0018 23.9 2.3 17 80-96 84-101 (266)
149 1yy3_A S-adenosylmethionine:tR 20.3 59 0.002 27.0 2.6 26 103-129 234-259 (346)
150 3ck2_A Conserved uncharacteriz 20.3 56 0.0019 23.0 2.3 21 80-100 99-119 (176)
151 2wj6_A 1H-3-hydroxy-4-oxoquina 20.3 49 0.0017 24.7 2.0 17 80-96 85-102 (276)
152 1wm1_A Proline iminopeptidase; 20.2 54 0.0019 24.2 2.3 16 81-96 98-114 (317)
153 2psd_A Renilla-luciferin 2-mon 20.0 42 0.0014 25.6 1.6 17 80-96 102-120 (318)
154 3fle_A SE_1780 protein; struct 20.0 58 0.002 24.9 2.4 38 83-130 92-137 (249)
No 1
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=100.00 E-value=5.3e-62 Score=395.56 Aligned_cols=148 Identities=36% Similarity=0.609 Sum_probs=138.7
Q ss_pred CCCccEEEEecccCCCHHHHHHHHHHhhcCCCC-CCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccCH
Q psy7461 1 MSRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLD-PKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSP 79 (149)
Q Consensus 1 m~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~-~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~ 79 (149)
|||||+|++|||||++.+++.+|++.+...... .+++|+|||||++|..+.+.+.+++.+||||||+.++|||||||||
T Consensus 1 mmr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~ 80 (248)
T 1o5x_A 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGIQNVSKFGNGSYTGEVSA 80 (248)
T ss_dssp --CCEEEEEECCBCCCHHHHHHHHHHHHTSCCCTTTEEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSCSBSCTTCCCH
T ss_pred CCCCCEEEEecCcccCHHHHHHHHHHHHhhcccccCceEEEeCcHHHHHHHHHHhccCCeEEeccCCCCCCCCcCCcCCH
Confidence 899999999999999999999999999763333 4699999999999999988876679999999999999999999999
Q ss_pred HHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 80 AMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 80 ~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 81 ~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 149 (248)
T 1o5x_A 81 EIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKA 149 (248)
T ss_dssp HHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEeCChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999975
No 2
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=100.00 E-value=4.9e-62 Score=395.99 Aligned_cols=148 Identities=64% Similarity=1.062 Sum_probs=139.8
Q ss_pred CC-CccEEEEecccCCCHHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccCH
Q psy7461 1 MS-RKFWVGGNWKMNGNKKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSP 79 (149)
Q Consensus 1 m~-rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~ 79 (149)
|| |||+|++|||||++.+++.+|++.+.......+++|+|||||++|..+.+.+.+++.+||||||+.++|||||||||
T Consensus 1 mm~r~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~ 80 (249)
T 3th6_A 1 MAARRFCVGGNWKMHGSKNSIRDICNTLKGASLDPNVEVIVACPAPYLDYCRSLLPPSVALAAQNCYKVEQGAFTGEISP 80 (249)
T ss_dssp --CCCCEEEEECCBCCCHHHHHHHHHHHHTSCCCTTSEEEEEECGGGHHHHHHHSCTTEEEEESCCCSSSSBSCTTCCCH
T ss_pred CCCCCeEEEEEhhhccCHHHHHHHHHHHHhhcccCCceEEEeCcHHHHHHHHHHhccCCEEEeeecCCccCCCcccccCH
Confidence 55 89999999999999999999999998755445799999999999999998877789999999999999999999999
Q ss_pred HHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 80 AMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 80 ~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+|+.+||+.
T Consensus 81 ~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 149 (249)
T 3th6_A 81 GMIKDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALESGLNVIACIGELLEDREAGRTEEVCFRQIKH 149 (249)
T ss_dssp HHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999964
No 3
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=100.00 E-value=2.5e-61 Score=391.67 Aligned_cols=148 Identities=57% Similarity=0.974 Sum_probs=139.5
Q ss_pred CCCccEEEEecccCCCHHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccCHH
Q psy7461 1 MSRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPA 80 (149)
Q Consensus 1 m~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~ 80 (149)
|||||+|++|||||++.+++.+|++.+.....+.+++|+|||||++|..+.+.+...+.+||||||+.++|||||||||+
T Consensus 2 ~mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 81 (248)
T 1r2r_A 2 PSRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPG 81 (248)
T ss_dssp -CCCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCCCCEEEEeCCcccCHHHHHHHHHHHHhhccccCceEEEeCcHHHHHHHHHHhhCCceEEeccCCCCCCCCccCccCHH
Confidence 68999999999999999999999999976544456999999999999999988864599999999999999999999999
Q ss_pred HHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 81 MLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 81 mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 82 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 149 (248)
T 1r2r_A 82 MIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKV 149 (248)
T ss_dssp HHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEECChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999964
No 4
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=100.00 E-value=1.9e-61 Score=394.25 Aligned_cols=148 Identities=70% Similarity=1.180 Sum_probs=139.6
Q ss_pred CCCccEEEEecccCCCHHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccCHH
Q psy7461 1 MSRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPA 80 (149)
Q Consensus 1 m~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~ 80 (149)
|||||+|+||||||++.+++.+|++.+.......+++|+|||||++|..+.+.+.+++.+|||||++.++|||||||||+
T Consensus 1 m~r~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 80 (259)
T 2i9e_A 1 MARKFVVGGNWKMNGDKKQINEIIGFLKSGPLNQDTEVVVGVPAIYLELVRTCVPASIGVAAQNCYKVPKGAFTGEISPA 80 (259)
T ss_dssp -CCCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEEECGGGHHHHHHHSCTTSEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCCCcEEEEecccccCHHHHHHHHHHHhhhcccCCeeEEEeCCHHHHHHHHHHhhCCCeEEeccCCCCCCCCccCccCHH
Confidence 89999999999999999999999999976433456999999999999999988865799999999999999999999999
Q ss_pred HHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 81 MLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 81 mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||+++||++|+|.+||.+||+.
T Consensus 81 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIvCvGEtleere~g~t~~vv~~Ql~~ 148 (259)
T 2i9e_A 81 MIKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVIACIGETLEEREAGKTEEVVFRQTKA 148 (259)
T ss_dssp HHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999964
No 5
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=100.00 E-value=3.2e-61 Score=392.38 Aligned_cols=147 Identities=42% Similarity=0.741 Sum_probs=139.5
Q ss_pred CCccEEEEecccC-CCHHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccCHH
Q psy7461 2 SRKFWVGGNWKMN-GNKKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPA 80 (149)
Q Consensus 2 ~rk~~i~~NwKmn-~~~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~ 80 (149)
||||+|+|||||| ++.+++.+|++.+.....+.+++|+|||||++|..+.+.+.+++.+||||||+.++|||||||||+
T Consensus 4 mr~~~i~gNWKmn~~~~~~~~~l~~~l~~~~~~~~~ev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 83 (255)
T 3qst_A 4 MRTFFVGGNWKANPKTVQEAEKLVEMLNGAKVEGNVEVVVAAPFVFLPTLQQKLRKDWKVSAENVFTKPNGAFTGEVTVP 83 (255)
T ss_dssp -CCCEEEEECCSCCSSHHHHHHHHHHHHTCCCCSSCEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSSSSSCTTCCCHH
T ss_pred CCCcEEEEEhhcccCCHHHHHHHHHHHHhhcccCCceEEEeCCHHHHHHHHHHhccCCeEEecccCCCCCCCccCccCHH
Confidence 7999999999999 999999999999987544456999999999999999988777899999999999999999999999
Q ss_pred HHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 81 MLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 81 mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 84 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~ 151 (255)
T 3qst_A 84 MIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKIIYCCGEHLSEREAGKASEFVSAQIEK 151 (255)
T ss_dssp HHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHHcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999964
No 6
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=100.00 E-value=4.6e-61 Score=391.26 Aligned_cols=148 Identities=42% Similarity=0.647 Sum_probs=138.5
Q ss_pred CCCccEEEEecccCCCHHHHHHHHHHhhc-CCCCCCeEEEEecchhhHHHHhhhCC-CCeeeeecccccCCCCCcccccC
Q psy7461 1 MSRKFWVGGNWKMNGNKKEIEGIVDFLKK-GPLDPKVEVVVGVPAIYLEYAKCLLP-SNVAPAAQNCYKVPKGAFTGELS 78 (149)
Q Consensus 1 m~rk~~i~~NwKmn~~~~~~~~~~~~~~~-~~~~~~~~v~i~P~~~~L~~~~~~~~-~~i~igAQnv~~~~~Ga~TGeiS 78 (149)
|||||+|+||||||++.+++.+|++.+.. .....+++|+|||||++|..+.+.+. +++.+||||||+.++||||||||
T Consensus 1 ~Mrk~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS 80 (255)
T 1b9b_A 1 ITRKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEIS 80 (255)
T ss_dssp -CCSCEEEEECCBCCCHHHHHHHHHHHHHHTSSCCSSEEEEECCGGGHHHHHHHHTTSSSEEEESCCCSSSSBSCTTCCC
T ss_pred CCCCCEEEEeCCcCcCHHHHHHHHHHHHhhcccccCeeEEEeCcHHHHHHHHHHhcCCCceEeeccCCCCCCCCccCcCC
Confidence 68999999999999999999999999876 32224699999999999999988774 58999999999999999999999
Q ss_pred HHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 79 PAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 79 ~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 81 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 150 (255)
T 1b9b_A 81 PLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVRE 150 (255)
T ss_dssp HHHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999964
No 7
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=100.00 E-value=3e-61 Score=395.26 Aligned_cols=147 Identities=37% Similarity=0.589 Sum_probs=138.9
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhcCC--CCCCeEEEEecchhhHHHHhhhCC-CCeeeeecccccCCCCCcccccC
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKKGP--LDPKVEVVVGVPAIYLEYAKCLLP-SNVAPAAQNCYKVPKGAFTGELS 78 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~--~~~~~~v~i~P~~~~L~~~~~~~~-~~i~igAQnv~~~~~Ga~TGeiS 78 (149)
||||+|+||||||++.+++.+|++.+.... ...+++|+|||||++|..+.+.+. ++|.+||||||+.++||||||||
T Consensus 25 Mrk~~i~gNWKMn~t~~~~~~l~~~l~~~~~~~~~~veVvV~PP~~~L~~v~~~~~~~~i~vgAQN~~~~~~GAfTGEIS 104 (272)
T 4g1k_A 25 QRIKRVIGNWKMHGRLSGNQALLTEVAQGAQAVHDNVAIGVCVPFPYLAQAQAQLQGGRVSWGSQDVSAHEQGAYTGEVA 104 (272)
T ss_dssp CCCEEEEEECCBCCCHHHHHHHHHHHHHHHTTSCTTEEEEEECCGGGHHHHHHHHTTSSEEEEESCCCSSSSBSCTTCCC
T ss_pred CCCCEEEEEhhhCcCHHHHHHHHHHHHhccccccCCceEEEeCCHHHHHHHHHHhcCCCceEEecccCCCCCCCCcCcCC
Confidence 699999999999999999999999987643 235799999999999999988775 58999999999999999999999
Q ss_pred HHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 79 PAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 79 ~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||+++||++|+|.+||.+||+.
T Consensus 105 a~MLkd~G~~~VIiGHSERR~~fgEtde~V~~K~~~Al~~GL~pIlCVGEtleeReag~t~~vv~~Ql~~ 174 (272)
T 4g1k_A 105 AGMVAEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVCVGETLAEREAGTTEQVVGAQLDA 174 (272)
T ss_dssp HHHHHTTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECchhcccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999964
No 8
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=100.00 E-value=2.4e-61 Score=395.11 Aligned_cols=148 Identities=39% Similarity=0.551 Sum_probs=137.3
Q ss_pred CCCccEEEEecccCCCHHHHHHHHHHhhcCCCCC---CeEEEEecchhhHHHHhhhCC---CCeeeeecccccCCCCCcc
Q psy7461 1 MSRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLDP---KVEVVVGVPAIYLEYAKCLLP---SNVAPAAQNCYKVPKGAFT 74 (149)
Q Consensus 1 m~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~---~~~v~i~P~~~~L~~~~~~~~---~~i~igAQnv~~~~~Ga~T 74 (149)
|+|||+|+||||||++.+++.+|++.+.....+. +++|+|||||++|..+.+.+. +++.+|||||++.++||||
T Consensus 1 m~rk~~i~gNWKMn~~~~~~~~l~~~l~~~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~~~i~vgAQn~~~~~~GAfT 80 (267)
T 3ta6_A 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYT 80 (267)
T ss_dssp --CCCEEEEECCBCCCHHHHHHHHHHHHHHSCGGGGGTCEEEEECCGGGHHHHHHHHHHTTCSCEEEESCCCSSSSBSCT
T ss_pred CCCCcEEEEEhhhccCHHHHHHHHHHHHHhccccccCCceEEEECCHHHHHHHHHHhcCCCCceEEEecccCCCCCCCcc
Confidence 7899999999999999999999999987644332 699999999999999988764 3599999999999999999
Q ss_pred cccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 75 GELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 75 GeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
||||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 81 GEIS~~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCvGEtleeReag~t~~vv~~Ql~~ 154 (267)
T 3ta6_A 81 GDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRG 154 (267)
T ss_dssp TCCCHHHHHHTTCCEEEESCHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred CcccHHHHHHcCCCEEEEcchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999964
No 9
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.3e-61 Score=393.21 Aligned_cols=147 Identities=40% Similarity=0.641 Sum_probs=139.4
Q ss_pred CCCccEEEEecccCCCHHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCC----CCeeeeecccccCCCCCcccc
Q psy7461 1 MSRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLP----SNVAPAAQNCYKVPKGAFTGE 76 (149)
Q Consensus 1 m~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~----~~i~igAQnv~~~~~Ga~TGe 76 (149)
|+|||+|++|||||++.+++.+|++.+.... ..+++|+|||||++|..+.+.+. +++.+||||||+.++||||||
T Consensus 22 m~rk~~i~gNWKmn~t~~~~~~l~~~l~~~~-~~~vevvv~Pp~~~L~~v~~~~~~~~~~~i~vgAQn~~~~~~GAfTGE 100 (271)
T 3krs_A 22 MSRKYFVGGNFKCNGTKESLKTLIDSFKQVE-SSNSEVYVFPTSLHISLVKEFFGNDHPGVFKIGSQNISCTGNGAFTGE 100 (271)
T ss_dssp -CCCCEEEEECCBCCCHHHHHHHHHHHTTCC-CCSSEEEEECCGGGHHHHHHHHCSSSCSCEEECBSCCCSSCSBSCTTC
T ss_pred cCCCeEEEEEhhhCcCHHHHHHHHHHHHhcc-cCCceEEEECcHHHHHHHHHHHhhccCCCceEEecccccccCCCcccc
Confidence 5689999999999999999999999998765 55799999999999999988773 589999999999999999999
Q ss_pred cCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 77 LSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 77 iS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
|||+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||+++||++|+|.+||.+||+.
T Consensus 101 IS~~mLkd~G~~~ViiGHSERR~~f~Etde~v~~Kv~~Al~~GL~pIlCVGEtleere~g~t~~vv~~Ql~~ 172 (271)
T 3krs_A 101 VSCEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGLKIVLCIGESLSERETGKTNDVIQKQLTE 172 (271)
T ss_dssp CCHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred ccHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999964
No 10
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=100.00 E-value=1.2e-60 Score=387.37 Aligned_cols=147 Identities=48% Similarity=0.774 Sum_probs=139.3
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCC-CCeeeeecccccCCCCCcccccCHH
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLP-SNVAPAAQNCYKVPKGAFTGELSPA 80 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~-~~i~igAQnv~~~~~Ga~TGeiS~~ 80 (149)
||||+|++|||||++.+++.+|++.+.....+.+++|+|||||++|..+.+.+. +++.+||||||+.++|||||||||+
T Consensus 1 Mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 80 (247)
T 1ney_A 1 ARTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENSVD 80 (247)
T ss_dssp CCCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEECCGGGHHHHHHHCCCTTEEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCCCEEEEECCcccCHHHHHHHHHHHHhhccccCceEEEeCcHHHHHHHHHHhcCCCceEEeccCCCCCCCCccCccCHH
Confidence 599999999999999999999999997654335699999999999999998875 5899999999999999999999999
Q ss_pred HHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 81 MLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 81 mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 81 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 148 (247)
T 1ney_A 81 QIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNA 148 (247)
T ss_dssp HHHHTTCCEEEESCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEECChhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999964
No 11
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=100.00 E-value=1.3e-60 Score=388.06 Aligned_cols=146 Identities=40% Similarity=0.659 Sum_probs=138.6
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCC-CCeeeeecccccCCCCCcccccCHH
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLP-SNVAPAAQNCYKVPKGAFTGELSPA 80 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~-~~i~igAQnv~~~~~Ga~TGeiS~~ 80 (149)
||||+|++|||||++.+++.+|++.+.....+.+++|+|||||++|..+.+.+. +++.+|||||| .++|||||||||+
T Consensus 4 mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~-~~~GA~TGEiS~~ 82 (251)
T 2vxn_A 4 KPQPIAAANWKCNGTTASIEKLVQVFNEHTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQNAI-AKSGAFTGEVSMP 82 (251)
T ss_dssp CCCCEEEEECCSCCCHHHHHHHHHHHHHSCCCSCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCB-SSCSSCTTCCBHH
T ss_pred CCCCEEEEecccccCHHHHHHHHHHHHhhccccCceEEEECcHHHHHHHHHHhcCCCceEeecccC-CCCCCCcCcCCHH
Confidence 799999999999999999999999997654345699999999999999998885 57999999999 9999999999999
Q ss_pred HHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 81 MLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 81 mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 83 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 150 (251)
T 2vxn_A 83 ILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSA 150 (251)
T ss_dssp HHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999974
No 12
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=100.00 E-value=2e-60 Score=387.98 Aligned_cols=147 Identities=39% Similarity=0.565 Sum_probs=139.1
Q ss_pred CCCccEEEEecccCCCHHHHHHHHHHhhc-CCCCCCeEEEEecchhhHHHHhhhCC-CCeeeeecccccCCCCCcccccC
Q psy7461 1 MSRKFWVGGNWKMNGNKKEIEGIVDFLKK-GPLDPKVEVVVGVPAIYLEYAKCLLP-SNVAPAAQNCYKVPKGAFTGELS 78 (149)
Q Consensus 1 m~rk~~i~~NwKmn~~~~~~~~~~~~~~~-~~~~~~~~v~i~P~~~~L~~~~~~~~-~~i~igAQnv~~~~~Ga~TGeiS 78 (149)
|||||+|++|||||++.+++.+|++.+.. ... .+++|+|||||++|..+.+.+. +++.+||||||+.++||||||||
T Consensus 2 ~~r~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~-~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GAfTGEiS 80 (257)
T 2yc6_A 2 PARRPFIGGNFKCNGSLDFIKSHVAAIAAHKIP-DSVDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETS 80 (257)
T ss_dssp CCCCCEEEEECCSCCCHHHHHHHHHHHHTSCCC-TTSEEEEECCGGGHHHHHHHCCCSSCEEEESCCCSSCSSSCTTCCC
T ss_pred CCCCeEEEEECccccCHHHHHHHHHHHhhcccc-cCceEEEeCCHHHHHHHHHHhCCCCceEEeccCCCCCCcCccCccC
Confidence 37999999999999999999999999976 223 5699999999999999998885 58999999999999999999999
Q ss_pred HHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 79 PAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 79 ~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 81 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 150 (257)
T 2yc6_A 81 VEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEA 150 (257)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999964
No 13
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=100.00 E-value=3.3e-61 Score=395.43 Aligned_cols=147 Identities=35% Similarity=0.559 Sum_probs=137.3
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhcCCCC-C-CeEEEEecchhhHHHHhhhCC-CCeeeeecccccCCCCCcccccC
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLD-P-KVEVVVGVPAIYLEYAKCLLP-SNVAPAAQNCYKVPKGAFTGELS 78 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~-~-~~~v~i~P~~~~L~~~~~~~~-~~i~igAQnv~~~~~Ga~TGeiS 78 (149)
||||+|+||||||++.+++.+|++.+.....+ . +++|+|||||++|..+.+.+. ++|.+|||||++.++||||||||
T Consensus 25 MRk~~i~gNWKMn~~~~~~~~l~~~l~~~~~~~~~~vevvv~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GAfTGEIS 104 (275)
T 3kxq_A 25 NIRPFIAGNWKMNGTGESLGELRAIAAGISSDLGRLFEALICVPATLLSRAFDILGGENILLGGQNCHFDDYGPYTGDIS 104 (275)
T ss_dssp -CCCEEEEECCBCCCGGGHHHHHHHHHHHC----CCSEEEEECCTTTHHHHHHHHTTSSSEEEESCCCSSSSBSCTTCCC
T ss_pred CCCCEEEEEhhhCcCHHHHHHHHHHHHhhcccccCCceEEEeCCHHHHHHHHHHhcCCCceEEecccccccCCCccCcCC
Confidence 69999999999999999999999998765433 4 799999999999999988775 58999999999999999999999
Q ss_pred HHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 79 PAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 79 ~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||+++||++|+|.+||.+||+.
T Consensus 105 ~~mLkd~G~~~VIiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCVGEtleeRe~g~t~~vv~~Ql~~ 174 (275)
T 3kxq_A 105 AFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQLEG 174 (275)
T ss_dssp HHHHHHHTCSEEEESCHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999964
No 14
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=100.00 E-value=1.6e-60 Score=387.34 Aligned_cols=146 Identities=40% Similarity=0.707 Sum_probs=138.6
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCC-CCeeeeecccccCCCCCcccccCHH
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLP-SNVAPAAQNCYKVPKGAFTGELSPA 80 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~-~~i~igAQnv~~~~~Ga~TGeiS~~ 80 (149)
||||+|++|||||++.+++.+|++.+.....+.+++|+|||||++|..+.+.+. +++.+|||||| .++|||||||||+
T Consensus 3 mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~-~~~GA~TGEiS~~ 81 (250)
T 2j27_A 3 KPQPIAAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAI-AKSGAFTGEVSLP 81 (250)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHTCCCCSCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCB-SSCBSCTTCCBHH
T ss_pred CCCcEEEEECccccCHHHHHHHHHHHHhhccccCceEEEeCCHHHHHHHHHHhcCCCceEeecccC-CCCCCcccccCHH
Confidence 799999999999999999999999997654445699999999999999998885 57999999999 9999999999999
Q ss_pred HHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 81 MLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 81 mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 82 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 149 (250)
T 2j27_A 82 ILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAA 149 (250)
T ss_dssp HHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHhhcccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999964
No 15
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=100.00 E-value=1.2e-60 Score=388.76 Aligned_cols=146 Identities=39% Similarity=0.612 Sum_probs=137.6
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhcCCCC-CCeEEEEecchhhHHHHhhhC---C-CCeeeeecccccCCCCCcccc
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLD-PKVEVVVGVPAIYLEYAKCLL---P-SNVAPAAQNCYKVPKGAFTGE 76 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~-~~~~v~i~P~~~~L~~~~~~~---~-~~i~igAQnv~~~~~Ga~TGe 76 (149)
||||+|++|||||++.+++.+|++.+ ..... .+++|+|||||++|..+.+.+ . +++.+||||||+.++||||||
T Consensus 2 Mrk~~i~gNwKmn~~~~~~~~l~~~l-~~~~~~~~~ev~v~Pp~~~L~~v~~~~~~~~~~~i~vgAQn~~~~~~GA~TGE 80 (254)
T 3m9y_A 2 MRTPIIAGNWKMNKTVQEAKDFVNAL-PTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGE 80 (254)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHC-CCCCCTTTCEEEEEECHHHHHHHHHHHHTTSSTTCEEEESCCCSSSSBSCTTC
T ss_pred CCCCEEEEEhhhCcCHHHHHHHHHHH-HhccccCCceEEEECCHHHHHHHHHHHhhcCCCcceEEecccccccCCCccCc
Confidence 69999999999999999999999999 43333 479999999999999998876 4 579999999999999999999
Q ss_pred cCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 77 LSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 77 iS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
|||+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 81 iS~~mL~d~G~~~ViiGHSERR~~f~Etd~~V~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~ 152 (254)
T 3m9y_A 81 TSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKK 152 (254)
T ss_dssp CCHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHcCCCEEEECcccccCccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864
No 16
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=100.00 E-value=2.6e-60 Score=390.14 Aligned_cols=147 Identities=64% Similarity=1.074 Sum_probs=139.5
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHH
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAM 81 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~m 81 (149)
||||+|+||||||++.+++.+|++.+.....+.+++|+|||||++|..+.+.+.+.|.+|||||++.++|||||||||+|
T Consensus 22 mrk~~i~gNWKmn~t~~~~~~l~~~l~~~~~~~~vevvv~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GAfTGEIS~~m 101 (275)
T 1mo0_A 22 TRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLVAAQNCYKVPKGAFTGEISPAM 101 (275)
T ss_dssp CSCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEECCGGGHHHHHHHSCTTEEEEESCCCSSSSBSCTTCCCHHH
T ss_pred CCCCEEEEecccccCHHHHHHHHHHHhhhccccCceEEEeCcHHHHHHHHHHhhCCCeEEeccCCCCCCCCccCcCCHHH
Confidence 79999999999999999999999999765444569999999999999999888645999999999999999999999999
Q ss_pred HHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 82 LVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 82 Lkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
|+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 102 Lkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pI~CvGEtleeReag~t~~vv~~Ql~~ 168 (275)
T 1mo0_A 102 IKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQA 168 (275)
T ss_dssp HHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999964
No 17
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=100.00 E-value=1.8e-60 Score=387.89 Aligned_cols=147 Identities=43% Similarity=0.598 Sum_probs=137.9
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhc-CCCCCCeEEEEecchhhHHHHhhhCC-CCeeeeecccccCCCCCcccccCH
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKK-GPLDPKVEVVVGVPAIYLEYAKCLLP-SNVAPAAQNCYKVPKGAFTGELSP 79 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~-~~~~~~~~v~i~P~~~~L~~~~~~~~-~~i~igAQnv~~~~~Ga~TGeiS~ 79 (149)
||||+|++|||||++.+++.+|++.+.. .....+++|+|||||++|..+.+.+. +++.+||||||+.++|||||||||
T Consensus 1 Mrk~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~ 80 (255)
T 1tre_A 1 MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVNLNLSGAFTGETSA 80 (255)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHHHHTTCCSCEEEEECCTTTHHHHHHHHTTSSEEEEESCCCSCSSBSCTTCCCH
T ss_pred CCCCEEEEecccccCHHHHHHHHHHHHhhcccccCeeEEEeCcHHHHHHHHHHhcCCCCeEeeccCCCCCCCCcCCcCCH
Confidence 5999999999999999999999999865 22224699999999999999988774 589999999999999999999999
Q ss_pred HHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 80 AMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 80 ~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 81 ~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 149 (255)
T 1tre_A 81 AMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDA 149 (255)
T ss_dssp HHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECccccccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999964
No 18
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=100.00 E-value=3e-60 Score=385.65 Aligned_cols=147 Identities=37% Similarity=0.525 Sum_probs=137.4
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCC-CCeeeeecccccCCCCCcccccCHH
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLP-SNVAPAAQNCYKVPKGAFTGELSPA 80 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~-~~i~igAQnv~~~~~Ga~TGeiS~~ 80 (149)
||||+|++|||||++.+++.+|++.+.......+++|+|||||++|..+.+.+. +++.+||||||+.++|||||||||+
T Consensus 1 Mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 80 (250)
T 1yya_A 1 MRRVLVAGNWKMHKTPSEARVWFAELKRLLPPLQSEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSAR 80 (250)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHHHCCCCSSEEEEECCGGGHHHHHHHHTTSSCEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCCCEEEEeCccccCHHHHHHHHHHHHhhccccCceEEEeCCHHHHHHHHHHhcCCCCeEEeccCCCCCCCCccCcCCHH
Confidence 599999999999999999999999987622221299999999999999988774 5899999999999999999999999
Q ss_pred HHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 81 MLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 81 mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||+++||++|+|.+||.+||+.
T Consensus 81 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE~leere~g~t~~vv~~Ql~~ 148 (250)
T 1yya_A 81 MLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRG 148 (250)
T ss_dssp HHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999964
No 19
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=100.00 E-value=2.1e-60 Score=387.74 Aligned_cols=147 Identities=40% Similarity=0.580 Sum_probs=137.4
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhc-CCCCCCeEEEEecchhhHHHHhhhCC---CCeeeeecccccCCCCCccccc
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKK-GPLDPKVEVVVGVPAIYLEYAKCLLP---SNVAPAAQNCYKVPKGAFTGEL 77 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~-~~~~~~~~v~i~P~~~~L~~~~~~~~---~~i~igAQnv~~~~~Ga~TGei 77 (149)
||||+|++|||||++.+++.+|++.+.. .....+++|+|||||++|..+.+.+. +++.+||||||+.++|||||||
T Consensus 1 mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~~~i~vgAQn~~~~~~GA~TGEi 80 (256)
T 1aw2_A 1 MRHPVVMGNWKLNGSKEMVVDLLNGLNAELEGVTGVDVAVAPPALFVDLAERTLTEAGSAIILGAQNTDLNNSGAFTGDM 80 (256)
T ss_dssp -CCCEEEEECCBCCCHHHHHHHHHHHHHHTTTCCSSEEEEECCGGGHHHHHHHHHHHTCCCEEEESCCCSCSSBSCTTCC
T ss_pred CCCCEEEEEcccccCHHHHHHHHHHHHhhcccccCeeEEEeCcHHHHHHHHHHHhCCCCCceEEeccCCCCCCCCccCcc
Confidence 5999999999999999999999999876 32224699999999999999988764 5899999999999999999999
Q ss_pred CHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 78 SPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 78 S~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
||+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 81 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 151 (256)
T 1aw2_A 81 SPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDA 151 (256)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999964
No 20
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=100.00 E-value=3.1e-60 Score=387.67 Aligned_cols=147 Identities=46% Similarity=0.717 Sum_probs=136.8
Q ss_pred CCCccEEEEecccCCCHHHHHHHHHHhh---cCCCCCCeEEEEecchhhHHHHhhhCC-CC----eeeeecccccCCCCC
Q psy7461 1 MSRKFWVGGNWKMNGNKKEIEGIVDFLK---KGPLDPKVEVVVGVPAIYLEYAKCLLP-SN----VAPAAQNCYKVPKGA 72 (149)
Q Consensus 1 m~rk~~i~~NwKmn~~~~~~~~~~~~~~---~~~~~~~~~v~i~P~~~~L~~~~~~~~-~~----i~igAQnv~~~~~Ga 72 (149)
|||||+|++|||||++.+++.+|++.+. ......+++|+|||||++|..+.+.+. ++ +.+|||||| .++||
T Consensus 2 ~mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~~~~~i~vgAQn~~-~~~GA 80 (261)
T 1m6j_A 2 GAGKFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEANGANILVSAENAW-TKSGA 80 (261)
T ss_dssp CCSCEEEEEECCBCCCHHHHHHHHHHHHHHCCHHHHTTEEEEEEECGGGHHHHHHHHHTSTTGGGEEEEESCCB-SSSBS
T ss_pred CCCCcEEEEEcccccCHHHHHHHHHHHHhhhhhccccCceEEEeCCHHHHHHHHHHhcCCCCCceeEEEeccCC-CCCCC
Confidence 4799999999999999999999999986 422224699999999999999988763 45 999999999 99999
Q ss_pred cccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 73 FTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 73 ~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
|||||||+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 81 fTGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 156 (261)
T 1m6j_A 81 YTGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKA 156 (261)
T ss_dssp CTTCCBHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred ccccCCHHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999964
No 21
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=100.00 E-value=1.7e-59 Score=381.52 Aligned_cols=146 Identities=43% Similarity=0.616 Sum_probs=137.4
Q ss_pred CccEEEEecccCCCHHHHHHHHHHhhcCCCC-CCeEEEEecchhhHHHHhhhCC-CCeeeeecccccCCCCCcccccCHH
Q psy7461 3 RKFWVGGNWKMNGNKKEIEGIVDFLKKGPLD-PKVEVVVGVPAIYLEYAKCLLP-SNVAPAAQNCYKVPKGAFTGELSPA 80 (149)
Q Consensus 3 rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~-~~~~v~i~P~~~~L~~~~~~~~-~~i~igAQnv~~~~~Ga~TGeiS~~ 80 (149)
|||+|++|||||++.+++.+|++.+...... .+++|+|||||++|..+.+.+. +++.+||||||+.++|||||||||+
T Consensus 1 r~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 80 (252)
T 2btm_A 1 RKPIIAGNWKMNGTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRLVQAADGTDLKIGAQTMHFADQGAYTGEVSPV 80 (252)
T ss_dssp CCCEEEEECCBCCCHHHHHHHHHHHTTTSCCTTTCEEEEEECGGGHHHHHHHHTTSSEEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCcEEEEEcccccCHHHHHHHHHHHHhhcccccCeeEEEECcHHHHHHHHHHhcCCCceEEeccCCCCCCCCcCCcCCHH
Confidence 6899999999999999999999998753333 4699999999999999988774 5899999999999999999999999
Q ss_pred HHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 81 MLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 81 mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||+++||++|+|.+||.+||+.
T Consensus 81 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 148 (252)
T 2btm_A 81 MLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEK 148 (252)
T ss_dssp HHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEeCchhcccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999964
No 22
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=100.00 E-value=1.8e-58 Score=371.97 Aligned_cols=142 Identities=27% Similarity=0.292 Sum_probs=132.7
Q ss_pred ccEEEEecccCCCHHHHHHHHHHhhcCCCC-CCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHH
Q psy7461 4 KFWVGGNWKMNGNKKEIEGIVDFLKKGPLD-PKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAML 82 (149)
Q Consensus 4 k~~i~~NwKmn~~~~~~~~~~~~~~~~~~~-~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mL 82 (149)
+|+|++|||||++.+++.+|++.+...... .+++|+|||||++|..+. .+++.+||||||+.++|||||||||+||
T Consensus 1 ~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~vev~v~Pp~~~L~~v~---~~~i~vgAQn~~~~~~GAfTGEiS~~mL 77 (233)
T 2jgq_A 1 TKIAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDFFGLLPNS---FLHFTLGVQNAYPRDCGAFTGEITSKHL 77 (233)
T ss_dssp CCEEEEECTBCSCHHHHHHHHHHHHHHSCGGGTTTEEEECCTTTCCCSC---CSSSEECBSCCBSSSSBSCTTCCBHHHH
T ss_pred CcEEEEECCcCcCHHHHHHHHHHHHhhcccccCceEEEeCCHHHHHHhc---CCCceEEeccCCCCCCCCccCccCHHHH
Confidence 589999999999999999999998762222 368999999999998876 4579999999999999999999999999
Q ss_pred HhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcC--ChHHHHHHhhhc
Q psy7461 83 VDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAG--QTEAVVYKQICC 148 (149)
Q Consensus 83 kd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g--~~~~v~~~Ql~~ 148 (149)
+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++| +|.+||.+||+.
T Consensus 78 ~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~~~t~~vv~~Ql~~ 145 (233)
T 2jgq_A 78 EELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLSEQLEN 145 (233)
T ss_dssp HHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHCHHHHHHHHHHHHTT
T ss_pred HHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCchhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999 999999999964
No 23
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=100.00 E-value=4.1e-58 Score=381.72 Aligned_cols=147 Identities=27% Similarity=0.309 Sum_probs=136.6
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhcCCC-------CCCeEEEEecchhhHHHHhhhCC---------------CCee
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKKGPL-------DPKVEVVVGVPAIYLEYAKCLLP---------------SNVA 59 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~-------~~~~~v~i~P~~~~L~~~~~~~~---------------~~i~ 59 (149)
||||+|+||||||++..++.+|++.|..... ..+++|+|||||++|..+.+.+. ++|.
T Consensus 34 mrk~li~gNWKMn~t~~~~~~~~~~l~~~l~~~~~~~~~~~vevvV~Ppf~~L~~v~~~l~~~~~~~~~~~~~~~~~~i~ 113 (310)
T 3s6d_A 34 LPKTLLIISLKMYFTPSRTIDYIQGLLEPRNDIIRQENRSRLLLALIPDFLTIYPCSEAIKEFESNLAAPQDADTPPPLL 113 (310)
T ss_dssp CCSEEEEEECTTCCCHHHHHHHHHHHHCGGGCCSCGGGTTTEEEEEECCGGGHHHHHHHHHHHHTTSCCC------CSSE
T ss_pred ccCCEEEEEccccCCHHHHHHHHHHHHHHHhhcccccccCCceEEEECCHHHHHHHHHHHhhccccccccccccCCCcce
Confidence 6999999999999999999999998764321 13699999999999999887653 5799
Q ss_pred eeecccccCCCCCcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHh-----
Q psy7461 60 PAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEERE----- 134 (149)
Q Consensus 60 igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~----- 134 (149)
+|||||++.++||||||||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|+
T Consensus 114 vgAQn~~~~~~GAfTGEISa~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~aAl~~GL~pIvCVGEtleere~~~~~ 193 (310)
T 3s6d_A 114 LGAQDCFWDSLGPYTGEISPVCLRDMNVSIVELGHAERRAIFGETDQQVARKAAAAADQGLIPLVCIGEVSTLGPIVSEA 193 (310)
T ss_dssp EEESCCCSSSSSSCTTCCCHHHHHHTTCCEEEESCHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEECCCSCCCSSHHHH
T ss_pred EEeccccccCCCCccccCCHHHHHHcCCCEEEecccccccccCCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHhhhhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHhhhc
Q psy7461 135 AGQTEAVVYKQICC 148 (149)
Q Consensus 135 ~g~~~~v~~~Ql~~ 148 (149)
+|+|.++|.+||+.
T Consensus 194 ~g~t~~vv~~Ql~~ 207 (310)
T 3s6d_A 194 IGRAVGECEAQIRP 207 (310)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHH
Confidence 99999999999864
No 24
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=100.00 E-value=1e-53 Score=346.24 Aligned_cols=139 Identities=39% Similarity=0.611 Sum_probs=125.3
Q ss_pred CCccEEEEecccCCCHHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCC-CCeeeeecccccCCCCCcccccCHH
Q psy7461 2 SRKFWVGGNWKMNGNKKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLP-SNVAPAAQNCYKVPKGAFTGELSPA 80 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~-~~i~igAQnv~~~~~Ga~TGeiS~~ 80 (149)
||||+|+||||||++.+++.+|++.+.......+++|+|||||++|..+.+.+. +++.+||||||+.++ |+
T Consensus 4 mrk~~i~gNWKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~--------~~ 75 (244)
T 2v5b_A 4 KPQPIAAANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNAGNADA--------LA 75 (244)
T ss_dssp CCCCEEEEEECC-----CCHHHHHHHHHCCCCSCCEEEEEECGGGHHHHHHHCCCTTEEEEESCCCCHHH--------HH
T ss_pred CCCcEEEEECCcccCHHHHHHHHHHHHhhccccCceEEEeCcHHHHHHHHHHhcCCCceEEeccCCCCCC--------HH
Confidence 799999999999999999999999987643334699999999999999998875 589999999998877 99
Q ss_pred HHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHhhhc
Q psy7461 81 MLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYKQICC 148 (149)
Q Consensus 81 mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~Ql~~ 148 (149)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+||.+||+.
T Consensus 76 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleereag~t~~vv~~Ql~~ 143 (244)
T 2v5b_A 76 SLKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAA 143 (244)
T ss_dssp HHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEeCchhhhhccCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999964
No 25
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=100.00 E-value=1.4e-44 Score=289.65 Aligned_cols=127 Identities=20% Similarity=0.247 Sum_probs=116.2
Q ss_pred CCccEEEEecccCCCH--HHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccCH
Q psy7461 2 SRKFWVGGNWKMNGNK--KEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSP 79 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~--~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~ 79 (149)
||||+|++|||||++. +++.+|++.+.......+++++++||+++|..+.+.+ ++++++||+++..+||||||||+
T Consensus 4 mr~~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~v~~~~--~i~v~aQdv~~~~~Ga~TGeis~ 81 (225)
T 1hg3_A 4 LKEPIIAINFKTYIEATGKRALEIAKAAEKVYKETGVTIVVAPQLVDLRMIAESV--EIPVFAQHIDPIKPGSHTGHVLP 81 (225)
T ss_dssp CCSSEEEEECTBCGGGSHHHHHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHSC--SSCBEESCCCSCCSBSCTTCCCH
T ss_pred CCCCEEEEECcccCCCCHHHHHHHHHHHHhhccccCCcEEEeCCHHHHHHHHHhc--CCceeeeeCCcccCCCccCcccH
Confidence 7999999999999875 9999999988653222468999999999999998775 78999999999999999999999
Q ss_pred HHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHh
Q psy7461 80 AMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEERE 134 (149)
Q Consensus 80 ~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~ 134 (149)
.||+++||+|||+||||||.+|+| +++|++.|+++||+||+||||++|++.
T Consensus 82 ~~l~~~Ga~~VllghseRR~~~~e----~~~k~~~A~~~GL~~ivcVge~~e~~~ 132 (225)
T 1hg3_A 82 EAVKEAGAVGTLLNHSENRMILAD----LEAAIRRAEEVGLMTMVCSNNPAVSAA 132 (225)
T ss_dssp HHHHHTTCCEEEESCGGGCCBHHH----HHHHHHHHHHHTCEEEEEESSHHHHHH
T ss_pred HHHHHcCCCEEEECcchhcCCHHH----HHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 999999999999999999999986 899999999999999999999998854
No 26
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=100.00 E-value=1.6e-44 Score=289.56 Aligned_cols=127 Identities=24% Similarity=0.240 Sum_probs=115.5
Q ss_pred CCccEEEEecccCCCH--HHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccCH
Q psy7461 2 SRKFWVGGNWKMNGNK--KEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSP 79 (149)
Q Consensus 2 ~rk~~i~~NwKmn~~~--~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~ 79 (149)
||||+|++|||||++. +++.+|++.+.......+++++++||+++|..+.+.+ ++++++|||++..+||||||||+
T Consensus 1 mr~~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~L~~v~~~~--~i~v~aQdv~~~~~Ga~TGeis~ 78 (226)
T 1w0m_A 1 MRLPILIINFKAYGEAAGKRAVELAKAAERAARELGVNIVVAPNHLELGLVSQSV--DIPVYAQGADVEAGGAHTAHVSL 78 (226)
T ss_dssp CCSSEEEEECTBCGGGSTHHHHHHHHHHHHHHHHHTCEEEEECCGGGHHHHHTTC--SSCBEESCCSBSSCSSCTTCCBH
T ss_pred CCCCEEEEECcccCCCCHHHHHHHHHHHHhcccccCCcEEEeCCHHHHHHHHHhc--CCceEeeECChhhCCCccCCCCH
Confidence 5899999999999875 9999999988653222368999999999999998765 78999999999999999999999
Q ss_pred HHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHh
Q psy7461 80 AMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEERE 134 (149)
Q Consensus 80 ~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~ 134 (149)
.||+++||+|||+||||||.+|+| +++|++.|+++||+||+||||++|++.
T Consensus 79 ~~l~~~Ga~~VllghseRR~~~~e----~~~k~~~A~~~GL~~ivcVge~~e~~~ 129 (226)
T 1w0m_A 79 ENIKEAGGSGVILNHSEAPLKLND----LARLVAKAKSLGLDVVVCAPDPRTSLA 129 (226)
T ss_dssp HHHHHHTCCEEEECCTTSCCBHHH----HHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred HHHHHcCCCEEEEeeeeccCCHHH----HHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 999999999999999999999985 899999999999999999999998854
No 27
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.4e-35 Score=235.25 Aligned_cols=123 Identities=18% Similarity=0.254 Sum_probs=110.4
Q ss_pred EEEEecccCCCH--HHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHH
Q psy7461 6 WVGGNWKMNGNK--KEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLV 83 (149)
Q Consensus 6 ~i~~NwKmn~~~--~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLk 83 (149)
+|++|||||++. +++.+|++.+.......+++++++||+++|..+++.+ +++++|||+++.++|+||||+|+.|++
T Consensus 2 ~i~~NwKm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~--~~~v~aqd~~~~~~ga~tGei~~~~~~ 79 (219)
T 2h6r_A 2 VIVINYKTYNESIGNRGLEIAKIAEKVSEESGITIGVAPQFVDLRMIVENV--NIPVYAQHIDNINPGSHTGHILAEAIK 79 (219)
T ss_dssp CEEEECTTCGGGSTHHHHHHHHHHHHHHHHHTCCEEEECCTTTHHHHHHHC--CSCBEESCCCSCCSBSCTTCCCHHHHH
T ss_pred EEEEECccCCCCCHHHHHHHHHHHHhcccccCCcEEEECCHHHHHHHHHHc--CCcEEEEECChhhcCCccCchHHHHHH
Confidence 789999999875 9999999988653222368999999999999998876 788999999999999999999999999
Q ss_pred hcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHh
Q psy7461 84 DVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEERE 134 (149)
Q Consensus 84 d~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~ 134 (149)
++||++|++||||||..++| +++|++.|+++||.||+|||++.+.+.
T Consensus 80 ~~Gad~Vll~~ser~l~~~e----~~~~~~~a~~~Gl~~iv~v~~~~e~~~ 126 (219)
T 2h6r_A 80 DCGCKGTLINHSEKRMLLAD----IEAVINKCKNLGLETIVCTNNINTSKA 126 (219)
T ss_dssp HHTCCEEEESBTTBCCBHHH----HHHHHHHHHHHTCEEEEEESSSHHHHH
T ss_pred HcCCCEEEECCccccCCHHH----HHHHHHHHHHCCCeEEEEeCCchHHHH
Confidence 99999999999999999865 788999999999999999999987643
No 28
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.20 E-value=5.7e-07 Score=73.90 Aligned_cols=72 Identities=11% Similarity=0.047 Sum_probs=63.8
Q ss_pred CCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEeccc--------------ccccccCCChHHHHHHHHHHHHCCCe
Q psy7461 56 SNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHS--------------ERRNVFGEPDSLIAEKVAHALETGLN 121 (149)
Q Consensus 56 ~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHS--------------ERR~~~~Etd~~i~~Kv~~al~~gl~ 121 (149)
.++++.|| ++..++|.+||.+- +.||+.|+.+| ++|| |+|.-|.+-.+. +++|.+.||.
T Consensus 93 ~~iPV~Ag-v~~~DP~~~~g~~L-e~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~----I~~A~~~gL~ 165 (286)
T 2p10_A 93 RHTPVLAG-VNGTDPFMVMSTFL-RELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEM----IAEAHKLDLL 165 (286)
T ss_dssp SSSCEEEE-ECTTCTTCCHHHHH-HHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHH----HHHHHHTTCE
T ss_pred CCCCEEEE-ECCcCCCcCHHHHH-HHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHH----HHHHHHCCCe
Confidence 37889999 99999999999999 99999999999 9999 999988644444 7999999999
Q ss_pred EEEEeCCCHHHHh
Q psy7461 122 VVACIGEKLEERE 134 (149)
Q Consensus 122 pIlCiGE~~e~r~ 134 (149)
.++|+-...+.+.
T Consensus 166 Ti~~v~~~eeA~a 178 (286)
T 2p10_A 166 TTPYVFSPEDAVA 178 (286)
T ss_dssp ECCEECSHHHHHH
T ss_pred EEEecCCHHHHHH
Confidence 9999998766543
No 29
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=95.59 E-value=0.064 Score=42.90 Aligned_cols=110 Identities=12% Similarity=0.114 Sum_probs=76.4
Q ss_pred cEEEEecccCC-CH------HHHHHHHHHhhcCCCCCCeEEE-----EecchhhHHHHhhhCCCCeeeeecccccCCCCC
Q psy7461 5 FWVGGNWKMNG-NK------KEIEGIVDFLKKGPLDPKVEVV-----VGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGA 72 (149)
Q Consensus 5 ~~i~~NwKmn~-~~------~~~~~~~~~~~~~~~~~~~~v~-----i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga 72 (149)
+.||+|.|-+- +. ....++++...+. ...+.|. +.+++.+|..+.+.. +++|-.|| .+
T Consensus 41 ~~vIaE~K~aSPSkG~i~~~~~~~~iA~~y~~~--A~~IsVlTd~~~F~gs~~dL~~ir~~v--~lPvLrKD-----fi- 110 (251)
T 1i4n_A 41 VKIIAEFKKASPSAGDINADASLEDFIRMYDEL--ADAISILTEKHYFKGDPAFVRAARNLT--CRPILAKD-----FY- 110 (251)
T ss_dssp CEEEEEECSBCSSSCBSCTTCCHHHHHHHHHHH--CSEEEEECCCSSSCCCTHHHHHHHTTC--CSCEEEEC-----CC-
T ss_pred ceEEEeecCCCCCCCccCCCCCHHHHHHHHHHh--CCceEEEecccccCCCHHHHHHHHHhC--CCCEEEee-----CC-
Confidence 67899999651 11 1344555555443 2335554 668999999998764 56677888 22
Q ss_pred cccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHH
Q psy7461 73 FTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLE 131 (149)
Q Consensus 73 ~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e 131 (149)
.++.- ...++++|++.+++-|+-+ +++.+..=++.|.+.||.+++||-...|
T Consensus 111 ~~~~q-i~ea~~~GAD~ilLi~a~l------~~~~l~~l~~~a~~lGl~~lvEv~~~eE 162 (251)
T 1i4n_A 111 IDTVQ-VKLASSVGADAILIIARIL------TAEQIKEIYEAAEELGMDSLVEVHSRED 162 (251)
T ss_dssp CSTHH-HHHHHHTTCSEEEEEGGGS------CHHHHHHHHHHHHTTTCEEEEEECSHHH
T ss_pred CCHHH-HHHHHHcCCCEEEEecccC------CHHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 23333 4458899999999999942 2367777789999999999999985543
No 30
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=89.68 E-value=1.5 Score=35.32 Aligned_cols=79 Identities=14% Similarity=0.201 Sum_probs=55.1
Q ss_pred eEEEEecch-----hhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEecccccccccCCChHHHHH
Q psy7461 36 VEVVVGVPA-----IYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAE 110 (149)
Q Consensus 36 ~~v~i~P~~-----~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~ 110 (149)
+.|+.-|.+ .+|..+.+.. +++|-.+|.- +=+.-...++++|++.|+++++-. +++.+..
T Consensus 96 IsVltd~~~f~Gs~~~L~~ir~~v--~lPVl~Kdfi-------~d~~qi~ea~~~GAD~VlLi~a~L------~~~~l~~ 160 (272)
T 3tsm_A 96 LSVLTDTPSFQGAPEFLTAARQAC--SLPALRKDFL-------FDPYQVYEARSWGADCILIIMASV------DDDLAKE 160 (272)
T ss_dssp EEEECCSTTTCCCHHHHHHHHHTS--SSCEEEESCC-------CSTHHHHHHHHTTCSEEEEETTTS------CHHHHHH
T ss_pred EEEeccccccCCCHHHHHHHHHhc--CCCEEECCcc-------CCHHHHHHHHHcCCCEEEEccccc------CHHHHHH
Confidence 455544443 4777777654 4555556521 111135667899999999999943 4677888
Q ss_pred HHHHHHHCCCeEEEEeCCC
Q psy7461 111 KVAHALETGLNVVACIGEK 129 (149)
Q Consensus 111 Kv~~al~~gl~pIlCiGE~ 129 (149)
=+..|.+.||.+++||-..
T Consensus 161 l~~~a~~lGl~~lvevh~~ 179 (272)
T 3tsm_A 161 LEDTAFALGMDALIEVHDE 179 (272)
T ss_dssp HHHHHHHTTCEEEEEECSH
T ss_pred HHHHHHHcCCeEEEEeCCH
Confidence 8899999999999999644
No 31
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=85.75 E-value=11 Score=29.16 Aligned_cols=99 Identities=10% Similarity=0.005 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccC-----HHHHHhcCCCEEE
Q psy7461 17 KKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELS-----PAMLVDVGIDWVI 91 (149)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS-----~~mLkd~G~~~vi 91 (149)
.....++++...+. +..-+.+.+..+|..+++.. ++++-+++-. +.|.++.-|. ...+.+.|++.++
T Consensus 35 ~~~~~~~A~a~~~~----Ga~~i~~~~~~~i~~ir~~v--~~Pvig~~k~--d~~~~~~~I~~~~~~i~~~~~~Gad~V~ 106 (232)
T 3igs_A 35 PEIVAAMALAAEQA----GAVAVRIEGIDNLRMTRSLV--SVPIIGIIKR--DLDESPVRITPFLDDVDALAQAGAAIIA 106 (232)
T ss_dssp HHHHHHHHHHHHHT----TCSEEEEESHHHHHHHHTTC--CSCEEEECBC--CCSSCCCCBSCSHHHHHHHHHHTCSEEE
T ss_pred cchHHHHHHHHHHC----CCeEEEECCHHHHHHHHHhc--CCCEEEEEee--cCCCcceEeCccHHHHHHHHHcCCCEEE
Confidence 45566667666542 22233446788888888765 4444445432 3343322222 4678999999999
Q ss_pred ecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCC
Q psy7461 92 LGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGE 128 (149)
Q Consensus 92 iGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE 128 (149)
++.+-+... ++-..+ ++.+.+.|+..++.+..
T Consensus 107 l~~~~~~~p--~~l~~~---i~~~~~~g~~v~~~v~t 138 (232)
T 3igs_A 107 VDGTARQRP--VAVEAL---LARIHHHHLLTMADCSS 138 (232)
T ss_dssp EECCSSCCS--SCHHHH---HHHHHHTTCEEEEECCS
T ss_pred ECccccCCH--HHHHHH---HHHHHHCCCEEEEeCCC
Confidence 999865322 232333 56666678888777753
No 32
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=82.15 E-value=15 Score=28.20 Aligned_cols=99 Identities=12% Similarity=-0.027 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCC---ccccc--CHHHHHhcCCCEEE
Q psy7461 17 KKEIEGIVDFLKKGPLDPKVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGA---FTGEL--SPAMLVDVGIDWVI 91 (149)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga---~TGei--S~~mLkd~G~~~vi 91 (149)
.....++++...+. +..-+.+.+..+|..+++.. ++++-+++-. +.|. |-+.. ....+.+.|++.++
T Consensus 35 ~~~~~~~A~a~~~~----Ga~~i~~~~~~~i~~ir~~v--~~Pvig~~k~--~~~~~~~~I~~~~~~i~~~~~aGad~I~ 106 (229)
T 3q58_A 35 PEIVAAMAQAAASA----GAVAVRIEGIENLRTVRPHL--SVPIIGIIKR--DLTGSPVRITPYLQDVDALAQAGADIIA 106 (229)
T ss_dssp HHHHHHHHHHHHHT----TCSEEEEESHHHHHHHGGGC--CSCEEEECBC--CCSSCCCCBSCSHHHHHHHHHHTCSEEE
T ss_pred cchHHHHHHHHHHC----CCcEEEECCHHHHHHHHHhc--CCCEEEEEee--cCCCCceEeCccHHHHHHHHHcCCCEEE
Confidence 35566666665542 22223346788888888775 4565555432 3333 32221 24679999999999
Q ss_pred ecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCC
Q psy7461 92 LGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGE 128 (149)
Q Consensus 92 iGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE 128 (149)
++.+-+... ++-..+ ++.+.+.|+..+..+..
T Consensus 107 l~~~~~~~p--~~l~~~---i~~~~~~g~~v~~~v~t 138 (229)
T 3q58_A 107 FDASFRSRP--VDIDSL---LTRIRLHGLLAMADCST 138 (229)
T ss_dssp EECCSSCCS--SCHHHH---HHHHHHTTCEEEEECSS
T ss_pred ECccccCCh--HHHHHH---HHHHHHCCCEEEEecCC
Confidence 999865322 232333 56666778888877754
No 33
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=80.17 E-value=16 Score=27.58 Aligned_cols=44 Identities=18% Similarity=0.022 Sum_probs=29.7
Q ss_pred ccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeC
Q psy7461 76 ELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 76 eiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiG 127 (149)
+-.++.+.+.|++++++| .+- .+....-++.+.+.|+.+++++.
T Consensus 98 ~~~~~~~~~~Gad~v~~~-~~~-------~~~~~~~~~~~~~~g~~~~~~i~ 141 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVV-DLP-------VFHAKEFTEIAREEGIKTVFLAA 141 (248)
T ss_dssp HHHHHHHHHHTCCEEEET-TCC-------GGGHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHCCCCEEEEC-CCC-------hhhHHHHHHHHHHhCCCeEEEEC
Confidence 456778899999999996 321 11233335566677888888775
No 34
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=77.61 E-value=2.8 Score=33.38 Aligned_cols=51 Identities=20% Similarity=0.185 Sum_probs=38.9
Q ss_pred ccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEE-EeCCCHHHHh
Q psy7461 76 ELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVA-CIGEKLEERE 134 (149)
Q Consensus 76 eiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIl-CiGE~~e~r~ 134 (149)
|-=.+.+++.|++++||-+ ..+.|.++. ...+.++||.+|. |--.+-++|-
T Consensus 106 e~F~~~~~~aGvdG~IipD----LP~eE~~~~----~~~~~~~Gl~~I~lvaP~t~~eRi 157 (252)
T 3tha_A 106 EKFVKKAKSLGICALIVPE----LSFEESDDL----IKECERYNIALITLVSVTTPKERV 157 (252)
T ss_dssp HHHHHHHHHTTEEEEECTT----CCGGGCHHH----HHHHHHTTCEECEEEETTSCHHHH
T ss_pred HHHHHHHHHcCCCEEEeCC----CCHHHHHHH----HHHHHHcCCeEEEEeCCCCcHHHH
Confidence 4456889999999999999 566676666 5788899998887 6666655543
No 35
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=74.59 E-value=11 Score=32.29 Aligned_cols=76 Identities=12% Similarity=-0.037 Sum_probs=56.4
Q ss_pred ecchhhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCC
Q psy7461 41 GVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGL 120 (149)
Q Consensus 41 ~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl 120 (149)
-.++.+|..+.+.. +++|-.+|. . .++. =...++.+|++.+++-|+-+. ++.+..=+..|.+.||
T Consensus 94 ~gs~~dL~~vr~~v--~lPvLrKDF-----I-~d~~-Qi~ea~~~GAD~ILLi~a~l~------~~~l~~l~~~a~~lgm 158 (452)
T 1pii_A 94 QGSFNFLPIVSQIA--PQPILCKDF-----I-IDPY-QIYLARYYQADACLLMLSVLD------DDQYRQLAAVAHSLEM 158 (452)
T ss_dssp CCCTTHHHHHHHHC--CSCEEEESC-----C-CSHH-HHHHHHHTTCSEEEEETTTCC------HHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHhc--CCCeEEEec-----c-CCHH-HHHHHHHcCCCEEEEEcccCC------HHHHHHHHHHHHHcCC
Confidence 36888999998775 566667771 1 1111 234478999999999999432 5678888899999999
Q ss_pred eEEEEeCCCHH
Q psy7461 121 NVVACIGEKLE 131 (149)
Q Consensus 121 ~pIlCiGE~~e 131 (149)
.+++||-...|
T Consensus 159 ~~LvEvh~~eE 169 (452)
T 1pii_A 159 GVLTEVSNEEE 169 (452)
T ss_dssp EEEEEECSHHH
T ss_pred eEEEEeCCHHH
Confidence 99999986544
No 36
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=73.70 E-value=5.3 Score=32.20 Aligned_cols=65 Identities=11% Similarity=0.206 Sum_probs=48.9
Q ss_pred cCCCCCcccc---cCHHHHHh--cCCCEEEe-cccccccccCCChHHHHHHHHHHHHCCCeEE-EEeCCCHHH
Q psy7461 67 KVPKGAFTGE---LSPAMLVD--VGIDWVIL-GHSERRNVFGEPDSLIAEKVAHALETGLNVV-ACIGEKLEE 132 (149)
Q Consensus 67 ~~~~Ga~TGe---iS~~mLkd--~G~~~vii-GHSERR~~~~Etd~~i~~Kv~~al~~gl~pI-lCiGE~~e~ 132 (149)
+...|+||-+ -.+.|-+| .|.+|+=+ =|||+|.++.+..+++ +..+.+.+.|+.++ ||+.....-
T Consensus 78 pNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv-~aa~~L~~~Gf~Vlpy~~dd~~~a 149 (265)
T 1wv2_A 78 PNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETL-KAAEQLVKDGFDVMVYTSDDPIIA 149 (265)
T ss_dssp EECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHH-HHHHHHHTTTCEEEEEECSCHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHH-HHHHHHHHCCCEEEEEeCCCHHHH
Confidence 4678999988 45677788 57778744 5899999998777774 34566666699999 899876543
No 37
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=65.96 E-value=11 Score=29.79 Aligned_cols=54 Identities=19% Similarity=0.081 Sum_probs=35.9
Q ss_pred eEEEEe--cch-hhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEeccc
Q psy7461 36 VEVVVG--VPA-IYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHS 95 (149)
Q Consensus 36 ~~v~i~--P~~-~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHS 95 (149)
.+.++. +|. ..+..+.+.+. +++ |+-. ..|.+|...|.+.|+++|++.++.|.+
T Consensus 182 Ad~i~~e~~~~~~~~~~i~~~~~--~P~---n~~~-~~~~~~p~~~~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 182 ARSVYPVGLSTAEQVERLVDAVS--VPV---NITA-HPVDGHGAGDLATLAGLGVRRVTFGPL 238 (255)
T ss_dssp CSEEEECCCCSHHHHHHHHTTCS--SCB---EEEC-BTTTBBTTBCHHHHHHTTCCEEECTTH
T ss_pred CcEEEEcCCCCHHHHHHHHHhCC--CCE---EEEe-cCCCCCCCCCHHHHHHcCCCEEEEHHH
Confidence 344444 443 44555555553 333 4432 245678999999999999999999998
No 38
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=65.39 E-value=14 Score=30.15 Aligned_cols=54 Identities=26% Similarity=0.368 Sum_probs=39.8
Q ss_pred CCCccc---ccCHHHHHhcCCCEEEec--------ccccccccC----CChHHHHHHHHHHHHCCCeEEE
Q psy7461 70 KGAFTG---ELSPAMLVDVGIDWVILG--------HSERRNVFG----EPDSLIAEKVAHALETGLNVVA 124 (149)
Q Consensus 70 ~Ga~TG---eiS~~mLkd~G~~~viiG--------HSERR~~~~----Etd~~i~~Kv~~al~~gl~pIl 124 (149)
.|+|+. .-+...|++.||++|-|= ||.-=. ++ ++++.+...++.|.+.||.+++
T Consensus 47 ~~~~~~~~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~-~~~~~t~~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 47 HGTWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIA-YGPPVTVSDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp TTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCB-CSTTTBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcCchhHHHHHHHHHHcCCCEEEEEeeecCCCCCCCccc-ccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 455554 256778999999999883 332111 22 3899999999999999999987
No 39
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=64.54 E-value=13 Score=29.60 Aligned_cols=50 Identities=18% Similarity=0.164 Sum_probs=36.3
Q ss_pred ccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEE-EEeCCCHHHH
Q psy7461 76 ELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVV-ACIGEKLEER 133 (149)
Q Consensus 76 eiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pI-lCiGE~~e~r 133 (149)
|-=++.+++.|++++|+. -..+.|.++. +..+.++|+.+| +|--.+.++|
T Consensus 115 ~~f~~~~~~aGvdGvIip----Dlp~ee~~~~----~~~~~~~gl~~I~lvap~t~~er 165 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIA----DVPTNESQPF----VAAAEKFGIQPIFIAPPTASDET 165 (271)
T ss_dssp HHHHHHHHHHTCCEEEET----TSCGGGCHHH----HHHHHHTTCEEEEEECTTCCHHH
T ss_pred HHHHHHHHHCCCCEEEEC----CCCHHHHHHH----HHHHHHcCCeEEEEECCCCCHHH
Confidence 445889999999999995 3445565555 588889999877 6666665444
No 40
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=64.16 E-value=5.3 Score=32.80 Aligned_cols=61 Identities=11% Similarity=0.024 Sum_probs=41.9
Q ss_pred CeEEEEecch---hhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEeccccccccc
Q psy7461 35 KVEVVVGVPA---IYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVF 101 (149)
Q Consensus 35 ~~~v~i~P~~---~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~ 101 (149)
+.+.++.+.. ..+..+.+.+ ++++-+ |+.. |..|+..|.+.|+++|++.++.|++--|...
T Consensus 202 GAd~i~~e~~~~~e~~~~i~~~l--~~P~la-n~~~---~g~~~~~~~~eL~~lGv~~v~~~~~~~raa~ 265 (318)
T 1zlp_A 202 GADATFVEAPANVDELKEVSAKT--KGLRIA-NMIE---GGKTPLHTPEEFKEMGFHLIAHSLTAVYATA 265 (318)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHS--CSEEEE-EECT---TSSSCCCCHHHHHHHTCCEEEECSHHHHHHH
T ss_pred CCCEEEEcCCCCHHHHHHHHHhc--CCCEEE-Eecc---CCCCCCCCHHHHHHcCCeEEEEchHHHHHHH
Confidence 3455554433 4455555555 355555 6653 5567889999999999999999999887654
No 41
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=62.57 E-value=20 Score=28.37 Aligned_cols=77 Identities=14% Similarity=0.228 Sum_probs=43.3
Q ss_pred CeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccc----cCHHHHHhcCCCEEEecccccccccCCCh-HHHH
Q psy7461 35 KVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGE----LSPAMLVDVGIDWVILGHSERRNVFGEPD-SLIA 109 (149)
Q Consensus 35 ~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGe----iS~~mLkd~G~~~viiGHSERR~~~~Etd-~~i~ 109 (149)
+++=+||+| ..+..+.+.+...+.+-.--+- ..|+-.|+ .++....+.|+++.++| |-.|+-.| ....
T Consensus 157 G~dGvV~s~-~e~~~ir~~~~~~f~~vtPGIr--~~g~~~gDQ~Rv~T~~~a~~aGad~iVvG----r~I~~a~dp~~a~ 229 (259)
T 3tfx_A 157 GADGVICSP-LEVKKLHENIGDDFLYVTPGIR--PAGNAKDDQSRVATPKMAKEWGSSAIVVG----RPITLASDPKAAY 229 (259)
T ss_dssp TCCEEECCG-GGHHHHHHHHCSSSEEEECCCC--CC-----------CHHHHHHTTCSEEEEC----HHHHTSSSHHHHH
T ss_pred CCCEEEECH-HHHHHHHhhcCCccEEEcCCcC--CCCCCcCCccccCCHHHHHHcCCCEEEEC----hHHhCCCCHHHHH
Confidence 467678887 3455666555444433222232 24555666 67999999999999999 55665443 4455
Q ss_pred HHHHHHHHC
Q psy7461 110 EKVAHALET 118 (149)
Q Consensus 110 ~Kv~~al~~ 118 (149)
++++..++.
T Consensus 230 ~~i~~~~~~ 238 (259)
T 3tfx_A 230 EAIKKEFNA 238 (259)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHH
Confidence 566655543
No 42
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=61.40 E-value=10 Score=25.59 Aligned_cols=44 Identities=23% Similarity=0.337 Sum_probs=32.8
Q ss_pred ccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 74 TGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 74 TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
.|...+..|++.||+.+|.|+--.+- .....+.|+.++...+.+
T Consensus 50 ~g~~~~~~l~~~gv~~vi~~~iG~~a------------~~~L~~~GI~v~~~~~~~ 93 (116)
T 1rdu_A 50 TGPKVVQSLVSKGVEYLIASNVGRNA------------FETLKAAGVKVYRFEGGT 93 (116)
T ss_dssp SSCSHHHHHHTTTCCEEECSSCCSSC------------HHHHHTTTCEEECCCSCB
T ss_pred ccHHHHHHHHHcCCCEEEECCCCHhH------------HHHHHHCCCEEEECCCCC
Confidence 35678999999999999999844432 245677899999765444
No 43
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=60.51 E-value=10 Score=25.92 Aligned_cols=45 Identities=16% Similarity=0.270 Sum_probs=32.6
Q ss_pred ccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCH
Q psy7461 74 TGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKL 130 (149)
Q Consensus 74 TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~ 130 (149)
.|...+..|++.||+.+|.|.--.+ . .....+.|+.++.+.+.+.
T Consensus 53 ~g~~~~~~l~~~gv~~vi~~~iG~~--------a----~~~L~~~GI~v~~~~~~~i 97 (124)
T 1eo1_A 53 AGIRTAQIIANNGVKAVIASSPGPN--------A----FEVLNELGIKIYRATGTSV 97 (124)
T ss_dssp CSTTHHHHHHHTTCCEEEECCSSHH--------H----HHHHHHHTCEEEECCSCCH
T ss_pred CCHHHHHHHHHCCCCEEEECCcCHH--------H----HHHHHHCCCEEEEcCCCCH
Confidence 4668899999999999999973222 1 2455677999998655443
No 44
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=60.21 E-value=16 Score=29.52 Aligned_cols=48 Identities=13% Similarity=0.081 Sum_probs=34.0
Q ss_pred CHHHHHhcCCCEEEec-ccccccccCCChHHHHHHHHHHHHCCCeEEEEe
Q psy7461 78 SPAMLVDVGIDWVILG-HSERRNVFGEPDSLIAEKVAHALETGLNVVACI 126 (149)
Q Consensus 78 S~~mLkd~G~~~viiG-HSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCi 126 (149)
.-+.|+++|++++=+. +-+.+. -.-+.+.+...+++|.++||.+++-+
T Consensus 32 ~~~ilk~~G~n~vRlri~v~P~~-g~~d~~~~~~~~~~ak~~Gl~v~ld~ 80 (334)
T 1fob_A 32 LETILADAGINSIRQRVWVNPSD-GSYDLDYNLELAKRVKAAGMSLYLDL 80 (334)
T ss_dssp HHHHHHHHTCCEEEEEECSCCTT-CTTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEEEEEECCCC-CccCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4788999999999882 111110 01234677778899999999999985
No 45
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=60.05 E-value=18 Score=28.72 Aligned_cols=50 Identities=12% Similarity=0.100 Sum_probs=35.9
Q ss_pred ccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEE-EEeCCCHHHH
Q psy7461 76 ELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVV-ACIGEKLEER 133 (149)
Q Consensus 76 eiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pI-lCiGE~~e~r 133 (149)
|-=.+.+++.|++++|+. -..+.|.++. +..+.++|+.+| +|--.+-++|
T Consensus 113 e~f~~~~~~aGvdgvii~----Dlp~ee~~~~----~~~~~~~gl~~i~liaP~t~~er 163 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIA----DVPVEESAPF----SKAAKAHGIAPIFIAPPNADADT 163 (267)
T ss_dssp HHHHHHHHHHTCCEEEET----TSCGGGCHHH----HHHHHHTTCEEECEECTTCCHHH
T ss_pred HHHHHHHHHcCCCEEEeC----CCCHhhHHHH----HHHHHHcCCeEEEEECCCCCHHH
Confidence 445789999999999994 3444555555 588889999887 6666654444
No 46
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=57.81 E-value=17 Score=29.30 Aligned_cols=61 Identities=13% Similarity=-0.023 Sum_probs=39.3
Q ss_pred CeEEEEecch---hhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEeccccccccc
Q psy7461 35 KVEVVVGVPA---IYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVF 101 (149)
Q Consensus 35 ~~~v~i~P~~---~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~ 101 (149)
+.+.++.+.. ..+..+.+.+. +++-+ |+- .|..|...+.+.|.++|++.|++|.+--|...
T Consensus 180 GAd~i~~e~~~~~~~~~~i~~~~~--iP~~~-N~~---~~g~~p~~~~~eL~~~G~~~v~~~~~~~~aa~ 243 (295)
T 1xg4_A 180 GAEMLFPEAITELAMYRQFADAVQ--VPILA-NIT---EFGATPLFTTDELRSAHVAMALYPLSAFRAMN 243 (295)
T ss_dssp TCSEEEETTCCSHHHHHHHHHHHC--SCBEE-ECC---SSSSSCCCCHHHHHHTTCSEEEESSHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHcC--CCEEE-Eec---ccCCCCCCCHHHHHHcCCCEEEEChHHHHHHH
Confidence 3455555433 34445555442 33333 443 24457889999999999999999999777544
No 47
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=57.37 E-value=25 Score=28.40 Aligned_cols=48 Identities=15% Similarity=0.014 Sum_probs=35.8
Q ss_pred CHHHHHhcCCCEEEec-ccccccccCCChHHHHHHHHHHHHCCCeEEEEe
Q psy7461 78 SPAMLVDVGIDWVILG-HSERRNVFGEPDSLIAEKVAHALETGLNVVACI 126 (149)
Q Consensus 78 S~~mLkd~G~~~viiG-HSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCi 126 (149)
....|++.|+++|=|. +-|... -..+.+.+.+.++.|.++||.+++-+
T Consensus 32 ~~~ilk~~G~N~VRi~~w~~P~~-g~~~~~~~~~~~~~A~~~GlkV~ld~ 80 (332)
T 1hjs_A 32 LENILAANGVNTVRQRVWVNPAD-GNYNLDYNIAIAKRAKAAGLGVYIDF 80 (332)
T ss_dssp HHHHHHHTTCCEEEEEECSSCTT-CTTSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHCCCCEEEEeeeeCCCC-CcCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4678899999999886 433331 12345677778899999999999975
No 48
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=56.60 E-value=11 Score=29.56 Aligned_cols=73 Identities=11% Similarity=0.066 Sum_probs=46.8
Q ss_pred chhhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeE
Q psy7461 43 PAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNV 122 (149)
Q Consensus 43 ~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~p 122 (149)
+..+|..+.+.. ++++-.+|.- +=+.-...++++|++.|++|++-.. +.+..-+..+.+.|+.+
T Consensus 94 ~~~~l~~i~~~v--~lPvl~kdfI-------~d~~qi~~a~~~GAD~VlL~~~~l~-------~~l~~l~~~a~~lGl~~ 157 (254)
T 1vc4_A 94 SLLDLKRVREAV--DLPLLRKDFV-------VDPFMLEEARAFGASAALLIVALLG-------ELTGAYLEEARRLGLEA 157 (254)
T ss_dssp CHHHHHHHHHHC--CSCEEEESCC-------CSHHHHHHHHHTTCSEEEEEHHHHG-------GGHHHHHHHHHHHTCEE
T ss_pred CHHHHHHHHHhc--CCCEEECCcC-------CCHHHHHHHHHcCCCEEEECccchH-------HHHHHHHHHHHHCCCeE
Confidence 556666666553 3444444411 0011236678899999999998432 24555577888899999
Q ss_pred EEEeCCCHH
Q psy7461 123 VACIGEKLE 131 (149)
Q Consensus 123 IlCiGE~~e 131 (149)
++|+-...|
T Consensus 158 lvev~~~~E 166 (254)
T 1vc4_A 158 LVEVHTERE 166 (254)
T ss_dssp EEEECSHHH
T ss_pred EEEECCHHH
Confidence 999986543
No 49
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=53.57 E-value=18 Score=32.15 Aligned_cols=49 Identities=18% Similarity=0.077 Sum_probs=39.1
Q ss_pred HHHHHhcCCCEEEe-----cccccccccCCC-hHHHHHHHHHHHHCCCeEEEEeC
Q psy7461 79 PAMLVDVGIDWVIL-----GHSERRNVFGEP-DSLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 79 ~~mLkd~G~~~vii-----GHSERR~~~~Et-d~~i~~Kv~~al~~gl~pIlCiG 127 (149)
..++|++|++.|-+ .|--++--|+-+ +.++.+=++.|.++||-+|++.|
T Consensus 38 l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~VilrpG 92 (595)
T 4e8d_A 38 LYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVRPS 92 (595)
T ss_dssp HHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEecC
Confidence 45899999999999 887777666544 34566668999999999999954
No 50
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=53.26 E-value=15 Score=25.96 Aligned_cols=45 Identities=11% Similarity=0.131 Sum_probs=32.9
Q ss_pred ccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHH
Q psy7461 74 TGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLE 131 (149)
Q Consensus 74 TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e 131 (149)
.|...+..|++.||+.||.|.--.+- ...|+.|+.++.+.|.+.+
T Consensus 67 ~g~~~~~~L~~~gv~~VI~g~iG~~a-------------~~~L~~GI~v~~~~~~~ve 111 (136)
T 2re2_A 67 RGVFMLKSALDHGANALVLSEIGSPG-------------FNFIKNKMDVYIVPEMPVA 111 (136)
T ss_dssp HHHHHHHHHHHTTCSEEEESCCBHHH-------------HHHHTTTSEEEECCSCBHH
T ss_pred ccHHHHHHHHHcCCCEEEECCCCHhH-------------HHHHHCCCEEEEcCCCCHH
Confidence 36678999999999999999754432 3444449999988665543
No 51
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=53.19 E-value=39 Score=26.67 Aligned_cols=45 Identities=11% Similarity=0.129 Sum_probs=34.5
Q ss_pred HHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 79 PAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 79 ~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
....+++|++.|++|++--. ++.+..=+..+.+.|+.+++++-..
T Consensus 128 v~~A~~~GAD~VlLi~a~l~------~~~l~~l~~~a~~lGl~~lvev~t~ 172 (272)
T 3qja_A 128 IHEARAHGADMLLLIVAALE------QSVLVSMLDRTESLGMTALVEVHTE 172 (272)
T ss_dssp HHHHHHTTCSEEEEEGGGSC------HHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred HHHHHHcCCCEEEEecccCC------HHHHHHHHHHHHHCCCcEEEEcCCH
Confidence 45667899999999988332 4556655788889999999999644
No 52
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=53.14 E-value=14 Score=30.47 Aligned_cols=58 Identities=16% Similarity=0.137 Sum_probs=39.5
Q ss_pred HHHHHhcCCCEEEe---ccccccc----------ccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcC
Q psy7461 79 PAMLVDVGIDWVIL---GHSERRN----------VFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAG 136 (149)
Q Consensus 79 ~~mLkd~G~~~vii---GHSERR~----------~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g 136 (149)
..++|++|++|||+ ||-..-. ...-..+.|..=+.+|.++||...+.+.-+...-..+
T Consensus 60 ~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S~~~W~~~ 130 (340)
T 4h41_A 60 FQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDSGRYWDTG 130 (340)
T ss_dssp HHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECCBCSHHHHHS
T ss_pred HHHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeEEEecCCChhhcCCC
Confidence 66889999999998 5532211 1112335677778999999999888877665444333
No 53
>2ktr_A Sequestosome-1; autophagy, NF-KB signaling, HOMO-oligomer, PB1 dimer, signaling protein, transport protein; NMR {Rattus norvegicus}
Probab=53.02 E-value=5.2 Score=28.42 Aligned_cols=49 Identities=27% Similarity=0.374 Sum_probs=22.8
Q ss_pred ccCCCCCcccccCHHHHHhcCCCEEEecccc-----cccccC---C----------ChHHHHHHHHHHH
Q psy7461 66 YKVPKGAFTGELSPAMLVDVGIDWVILGHSE-----RRNVFG---E----------PDSLIAEKVAHAL 116 (149)
Q Consensus 66 ~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSE-----RR~~~~---E----------td~~i~~Kv~~al 116 (149)
+....|||||.+-+-| .+-++.-+.||.| ||-.+. | +-+.+..||....
T Consensus 4 ~~~~~~~~~~~~~~~~--~l~vKayl~~~~~~~~EIRRF~l~~~~~p~~~~~~~~~s~~~L~~kV~~lF 70 (117)
T 2ktr_A 4 DTNNDGAYEGDELHMG--SLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPSERLLSRVAVLF 70 (117)
T ss_dssp ------------------CEEEEEEEECSSSCEEEEEEEEECSSSCSCSSSCCSCCHHHHHHHHHHHHC
T ss_pred ecCCccceeccccccc--cEEEEEEEecCCCCCCcEEEEEeccCCCccccccccCCCHHHHHHHHHHHc
Confidence 4557899999999888 4778888889877 443443 1 5577888888776
No 54
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=51.19 E-value=18 Score=24.57 Aligned_cols=41 Identities=22% Similarity=0.225 Sum_probs=30.0
Q ss_pred cCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 77 LSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 77 iS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
-.+..|++.||+.+|.|.=-.+ . .....+.|+.++...+.+
T Consensus 54 ~~~~~L~~~gv~~vi~~~iG~~--------a----~~~L~~~GI~v~~~~~~~ 94 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYGIGRR--------A----IEYFNSLGISVVTGVYGR 94 (121)
T ss_dssp HHHHHHHHTTCCEEECSBCCHH--------H----HHHHHHTTCEEECSBCSB
T ss_pred HHHHHHHHcCCCEEEECCCCHh--------H----HHHHHHCCCEEEECCCCC
Confidence 6788999999999999963222 1 255667899999765443
No 55
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=46.80 E-value=53 Score=25.22 Aligned_cols=52 Identities=12% Similarity=0.072 Sum_probs=38.6
Q ss_pred CHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 78 SPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 78 S~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
....|++.|++.|=+.|++.-.+-.+.-+.+.+=+..|.++||.+|+.+-..
T Consensus 36 ~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~ 87 (294)
T 2whl_A 36 AIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNKMVAVVEVHDA 87 (294)
T ss_dssp HHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 4678999999999888874322222334566667899999999999988653
No 56
>1jfx_A 1,4-beta-N-acetylmuramidase M1; beta-alpha-barrel, cellosyl, lysozyme, hydrolase; 1.65A {Streptomyces coelicolor} SCOP: c.1.8.8
Probab=45.23 E-value=27 Score=26.23 Aligned_cols=47 Identities=15% Similarity=0.304 Sum_probs=37.3
Q ss_pred CcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCe
Q psy7461 72 AFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLN 121 (149)
Q Consensus 72 a~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~ 121 (149)
.|.|.|....|+..|+++|+|==+|-..+. |.....-++.|.++||.
T Consensus 12 ~~qg~idw~~v~~~gi~FviiKateG~~~~---D~~f~~n~~~A~~aGl~ 58 (217)
T 1jfx_A 12 HWQGSINWSSVKSAGMSFAYIKATEGTNYK---DDRFSANYTNAYNAGII 58 (217)
T ss_dssp GGGCSCCHHHHHHTTCCEEEEEEEETTTEE---CTTHHHHHHHHHHTTCE
T ss_pred CCCCCCCHHHHHhCCCCEEEEEEecCCCcc---ChHHHHHHHHHHHCCCe
Confidence 467899999999999999999666655443 45556668999999985
No 57
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=45.06 E-value=25 Score=26.29 Aligned_cols=96 Identities=16% Similarity=0.134 Sum_probs=56.6
Q ss_pred CCHHHHHHHHHHhhcCCCCCC-eEEEEecch-----hhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCC
Q psy7461 15 GNKKEIEGIVDFLKKGPLDPK-VEVVVGVPA-----IYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGID 88 (149)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~-~~v~i~P~~-----~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~ 88 (149)
.+.+++.++++.+... -+ +++.+ |++ ..+..+++.+ ++..+.. |++..+. |+.-.+++.++|++
T Consensus 16 ~~~~~~~~~~~~~~~~---vd~ie~g~-~~~~~~G~~~i~~lr~~~-~~~~i~l-d~~l~d~----p~~~~~~~~~aGad 85 (218)
T 3jr2_A 16 TNLTDAVAVASNVASY---VDVIEVGT-ILAFAEGMKAVSTLRHNH-PNHILVC-DMKTTDG----GAILSRMAFEAGAD 85 (218)
T ss_dssp SSHHHHHHHHHHHGGG---CSEEEECH-HHHHHHTTHHHHHHHHHC-TTSEEEE-EEEECSC----HHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHhcCC---ceEEEeCc-HHHHhcCHHHHHHHHHhC-CCCcEEE-EEeeccc----HHHHHHHHHhcCCC
Confidence 4668888888876431 12 45553 332 2344444442 2223332 5555443 34467999999999
Q ss_pred EEEecccccccccCCChHHHHHHHHHHHHCCCeEEE-EeC
Q psy7461 89 WVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVA-CIG 127 (149)
Q Consensus 89 ~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIl-CiG 127 (149)
++.+ |.|-. ++.+..=++.+.++|+.+++ ++|
T Consensus 86 ~i~v-h~~~~------~~~~~~~~~~~~~~g~~~~~d~l~ 118 (218)
T 3jr2_A 86 WITV-SAAAH------IATIAACKKVADELNGEIQIEIYG 118 (218)
T ss_dssp EEEE-ETTSC------HHHHHHHHHHHHHHTCEEEEECCS
T ss_pred EEEE-ecCCC------HHHHHHHHHHHHHhCCccceeeee
Confidence 9988 66643 23444556667778888876 555
No 58
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=44.47 E-value=43 Score=24.37 Aligned_cols=100 Identities=20% Similarity=0.148 Sum_probs=55.6
Q ss_pred cEEEEecccCCCHHHHHHHHHHhhcCCCCCCe-EEEEecc-----hhhHHHHhhhCCCCeeeeecccccCCCCCcccccC
Q psy7461 5 FWVGGNWKMNGNKKEIEGIVDFLKKGPLDPKV-EVVVGVP-----AIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELS 78 (149)
Q Consensus 5 ~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~-~v~i~P~-----~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS 78 (149)
-++.+++ .+.+++.++++.+.. .-++ ++.. |- +..+..+++.. +++++.+ |.-..+ | ++.-
T Consensus 3 li~a~D~---~~~~~~~~~~~~~~~---~~diie~G~-p~~~~~g~~~i~~ir~~~-~~~~i~~-~~~~~~-~---~~~~ 69 (211)
T 3f4w_A 3 LQLALDE---LTLPEAMVFMDKVVD---DVDIIEVGT-PFLIREGVNAIKAIKEKY-PHKEVLA-DAKIMD-G---GHFE 69 (211)
T ss_dssp EEEEECS---CCHHHHHHHHHHHGG---GCSEEEECH-HHHHHHTTHHHHHHHHHC-TTSEEEE-EEEECS-C---HHHH
T ss_pred EEEEeCC---CCHHHHHHHHHHhhc---CccEEEeCc-HHHHhccHHHHHHHHHhC-CCCEEEE-EEEecc-c---hHHH
Confidence 3444553 567888888887742 2233 5554 21 22344444432 2455543 222222 1 2223
Q ss_pred HHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEE
Q psy7461 79 PAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVA 124 (149)
Q Consensus 79 ~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIl 124 (149)
.+.++++|++++++ |.+- .++.+..=++.+.+.|+.+++
T Consensus 70 ~~~~~~~Gad~v~v-~~~~------~~~~~~~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 70 SQLLFDAGADYVTV-LGVT------DVLTIQSCIRAAKEAGKQVVV 108 (211)
T ss_dssp HHHHHHTTCSEEEE-ETTS------CHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHhcCCCEEEE-eCCC------ChhHHHHHHHHHHHcCCeEEE
Confidence 89999999999999 5553 123444446667777887775
No 59
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=44.26 E-value=24 Score=24.76 Aligned_cols=41 Identities=22% Similarity=0.320 Sum_probs=30.5
Q ss_pred cCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 77 LSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 77 iS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
-.+..|++.||+.||.|.--.+ . .....+.|+.++...+.+
T Consensus 67 ~~a~~L~~~gv~vVI~g~IG~~--------a----~~~L~~~GI~v~~~~~g~ 107 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVRGIGRR--------A----IAAFEAMGVKVIKGASGT 107 (136)
T ss_dssp CHHHHHHHTTCSEEECSCCCHH--------H----HHHHHHTTCEEECSCCSB
T ss_pred HHHHHHHHCCCCEEEECCCCHH--------H----HHHHHHCCCEEEecCCCC
Confidence 6789999999999999964333 1 356677899999765444
No 60
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=43.22 E-value=78 Score=24.29 Aligned_cols=52 Identities=13% Similarity=-0.016 Sum_probs=37.6
Q ss_pred cCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCC
Q psy7461 77 LSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGE 128 (149)
Q Consensus 77 iS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE 128 (149)
-..+.||+.|++.|=+.|+..-.+-...-+.+.+-+..|.++||.+|+.+-.
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~Gi~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3567899999999988886421111122356667789999999999999853
No 61
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=43.17 E-value=32 Score=30.54 Aligned_cols=49 Identities=22% Similarity=0.233 Sum_probs=38.6
Q ss_pred HHHHHhcCCCEEEec-----ccccccccCCCh-HHHHHHHHHHHHCCCeEEEEeC
Q psy7461 79 PAMLVDVGIDWVILG-----HSERRNVFGEPD-SLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 79 ~~mLkd~G~~~viiG-----HSERR~~~~Etd-~~i~~Kv~~al~~gl~pIlCiG 127 (149)
..++|++|++.|-++ |--++--|+.+. +.+.+=++.|.++||.+|+..|
T Consensus 43 l~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~g 97 (612)
T 3d3a_A 43 IKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRPG 97 (612)
T ss_dssp HHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEEecC
Confidence 458999999999999 877765565443 3444557999999999999886
No 62
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=42.76 E-value=60 Score=24.66 Aligned_cols=80 Identities=20% Similarity=0.243 Sum_probs=41.5
Q ss_pred eEEEEecc--hhhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHH
Q psy7461 36 VEVVVGVP--AIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVA 113 (149)
Q Consensus 36 ~~v~i~P~--~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~ 113 (149)
++=+||++ ...+..+.+.++. +.+-.-.+.. .|. ++....+.|++|.++| |-.+-.++-....++++
T Consensus 129 ~~GvV~sat~~~e~~~ir~~~~~-f~~v~pGI~~--~g~-----~~~~a~~~Gad~iVvG---r~I~~a~dp~~a~~~i~ 197 (215)
T 3ve9_A 129 PKGFVAPATRPSMISRVKGDFPD-KLVISPGVGT--QGA-----KPGIALCHGADYEIVG---RSVYQSADPVRKLEEIV 197 (215)
T ss_dssp CSEEECCTTSHHHHHHHHHHCTT-SEEEECCTTS--TTC-----CTTHHHHTTCSEEEEC---HHHHTSSSHHHHHHHHH
T ss_pred CCceeeCCCCHHHHHHHHHhCCC-cEEEcCCCCc--CcC-----CHHHHHHcCCCEEEeC---HHHcCCCCHHHHHHHHH
Confidence 45556664 2345566655544 4333233321 121 3667779999999998 22333444455666677
Q ss_pred HHHHCCCeEEEEeCC
Q psy7461 114 HALETGLNVVACIGE 128 (149)
Q Consensus 114 ~al~~gl~pIlCiGE 128 (149)
..++..+.. |+|.
T Consensus 198 ~~i~~~~~~--~~~~ 210 (215)
T 3ve9_A 198 RSQEEVLSS--CEGA 210 (215)
T ss_dssp HHHHHHC--------
T ss_pred HHHHHHHHH--hhcc
Confidence 666666654 5553
No 63
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=42.40 E-value=37 Score=30.58 Aligned_cols=51 Identities=18% Similarity=0.083 Sum_probs=40.0
Q ss_pred CHHHHHhcCCCEEEe-----cccccccccCCC-hHHHHHHHHHHHHCCCeEEEEeCC
Q psy7461 78 SPAMLVDVGIDWVIL-----GHSERRNVFGEP-DSLIAEKVAHALETGLNVVACIGE 128 (149)
Q Consensus 78 S~~mLkd~G~~~vii-----GHSERR~~~~Et-d~~i~~Kv~~al~~gl~pIlCiGE 128 (149)
-..++|++|++.|-+ .|--++--|.-+ ..++.+=++.|.++||-+|++.|-
T Consensus 45 ~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr~GP 101 (654)
T 3thd_A 45 RLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPGP 101 (654)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEeccCC
Confidence 457899999999999 887776555533 244666689999999999999853
No 64
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=40.29 E-value=99 Score=23.13 Aligned_cols=66 Identities=17% Similarity=0.067 Sum_probs=42.6
Q ss_pred eeeecccccCCCCCcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeC
Q psy7461 59 APAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 59 ~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiG 127 (149)
++|.+-.++.+.-..+=+-..+.++++|.+++-+.-.. +..-+++.+.+--+.+.++||.+..|.+
T Consensus 3 kigi~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~---~~~~~~~~~~~~~~~l~~~gl~i~~~~~ 68 (294)
T 3vni_A 3 KHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASP---LPFYSDIQINELKACAHGNGITLTVGHG 68 (294)
T ss_dssp CEEEEGGGGCSSSCCCHHHHHHHHHHHTCSEEEEESTT---GGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eEEEehhhhcCCcCcCHHHHHHHHHHcCCCEEEecCcc---cCCcCHHHHHHHHHHHHHcCCeEEEeec
Confidence 35555555433212234556778999999999987543 2222556666666777889999887765
No 65
>2x8r_A Glycosyl hydrolase; peptidoglycan cleavage, endo-N-acetylmuramidases, motif; 1.70A {Aspergillus fumigatus}
Probab=40.24 E-value=26 Score=26.26 Aligned_cols=48 Identities=15% Similarity=0.174 Sum_probs=37.8
Q ss_pred CcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeE
Q psy7461 72 AFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNV 122 (149)
Q Consensus 72 a~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~p 122 (149)
.|.|+|....|+..|+++|+|==+|-..+. |.....-++.|.++||..
T Consensus 11 ~~qg~idw~~v~~~gi~FviiKateG~~~~---D~~f~~n~~~A~~aGl~v 58 (210)
T 2x8r_A 11 NHQKSVNFEAAKKDGAQFVMIKATEGTTYK---DTVFNSHYTGATKAGLLR 58 (210)
T ss_dssp TTCSCCCHHHHHHTTEEEEEEEEEETTTEE---CTTHHHHHHHHHHTTCEE
T ss_pred CCCCCCCHHHHHhCCCcEEEEEEecCCCcc---ChHHHHHHHHHHHCCCee
Confidence 467899999999999999999766655443 455666688899999853
No 66
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=40.15 E-value=52 Score=27.47 Aligned_cols=50 Identities=14% Similarity=0.187 Sum_probs=35.4
Q ss_pred cCHHHHHhcCCCEEEec-cccccc----cc--C-CChHHHHHHHHHHHHCCCeEEEEe
Q psy7461 77 LSPAMLVDVGIDWVILG-HSERRN----VF--G-EPDSLIAEKVAHALETGLNVVACI 126 (149)
Q Consensus 77 iS~~mLkd~G~~~viiG-HSERR~----~~--~-Etd~~i~~Kv~~al~~gl~pIlCi 126 (149)
-....|++.|+++|=|. +-+... .+ + -+.+.+.+.+++|.++||.+++-+
T Consensus 52 d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldf 109 (399)
T 1ur4_A 52 DIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADF 109 (399)
T ss_dssp CHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35788999999999862 111111 11 1 345777888999999999999974
No 67
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=39.21 E-value=70 Score=26.51 Aligned_cols=50 Identities=16% Similarity=0.095 Sum_probs=34.1
Q ss_pred HHHHHhcCCCEEEe-cccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 79 PAMLVDVGIDWVIL-GHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 79 ~~mLkd~G~~~vii-GHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
+..+.+.|++++.+ ||--|....+-.+-..-..+..++..+ .||+.-|--
T Consensus 266 A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~-ipVia~GGI 316 (392)
T 2nzl_A 266 AREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGK-VEVFLDGGV 316 (392)
T ss_dssp HHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTS-SEEEECSSC
T ss_pred HHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCC-CEEEEECCC
Confidence 78899999999888 465554555656655556666666433 577777754
No 68
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=37.75 E-value=51 Score=23.83 Aligned_cols=61 Identities=16% Similarity=0.237 Sum_probs=40.0
Q ss_pred cccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHH
Q psy7461 75 GELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVY 143 (149)
Q Consensus 75 GeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~ 143 (149)
|..-+++|++.|++.+ +.....++ +.|.+.++.+++.+-..|++.|-+--. ....|.+++.
T Consensus 29 ~~~l~~~l~~~G~~v~------~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g-~~D~t~eal~ 89 (164)
T 3pzy_A 29 GPIITEWLAQQGFSSA------QPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA-PTDSTPDQTV 89 (164)
T ss_dssp HHHHHHHHHHTTCEEC------CCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS-TTCCHHHHHH
T ss_pred HHHHHHHHHHCCCEEE------EEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC-CCccHHHHHH
Confidence 3445788999987643 33345566 889999999987677888888755221 1224555554
No 69
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=37.07 E-value=96 Score=25.48 Aligned_cols=64 Identities=22% Similarity=0.376 Sum_probs=43.5
Q ss_pred eeeeecccccCCCCCccccc------------CHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEE
Q psy7461 58 VAPAAQNCYKVPKGAFTGEL------------SPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVAC 125 (149)
Q Consensus 58 i~igAQnv~~~~~Ga~TGei------------S~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlC 125 (149)
..+-+|= +...|.=.||+ |.+...+.+++.+++|-+=.=-.| .+....+++.|+++|+..|--
T Consensus 51 ~~iVgvi--~~~~Gkd~ge~~~g~~~gipv~~d~~~al~~~~d~lvig~a~~gg~l---~~~~~~~I~~Al~~G~nVvsg 125 (350)
T 2g0t_A 51 FKPVCVV--AEHEGKMASDFVKPVRYDVPVVSSVEKAKEMGAEVLIIGVSNPGGYL---EEQIATLVKKALSLGMDVISG 125 (350)
T ss_dssp EEEEEEE--SSCTTCBGGGTCC-CCSCCBEESSHHHHHHTTCCEEEECCCSCCHHH---HHHHHHHHHHHHHTTCEEEEC
T ss_pred CeEEEEe--ecCCCCcHHHhhCCCCCCceeeCCHHHHHhcCCCEEEEEecCCCCCC---CHHHHHHHHHHHHcCCcEEeC
Confidence 5555554 44556666654 566677789999999985432222 347778899999999996533
Q ss_pred e
Q psy7461 126 I 126 (149)
Q Consensus 126 i 126 (149)
.
T Consensus 126 l 126 (350)
T 2g0t_A 126 L 126 (350)
T ss_dssp C
T ss_pred C
Confidence 3
No 70
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=36.58 E-value=65 Score=24.37 Aligned_cols=43 Identities=14% Similarity=0.168 Sum_probs=31.6
Q ss_pred CHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEe
Q psy7461 78 SPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACI 126 (149)
Q Consensus 78 S~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCi 126 (149)
-.+...++|++++.++- |. ...+...+-++.+.+.|+.+.+-+
T Consensus 77 ~i~~~~~aGadgv~vh~-e~-----~~~~~~~~~~~~i~~~g~~~gv~~ 119 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHV-EH-----NASPHLHRTLCQIRELGKKAGAVL 119 (230)
T ss_dssp THHHHHHHTCSEEEEEC-ST-----TTCTTHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEECc-cc-----ccchhHHHHHHHHHHcCCcEEEEE
Confidence 46899999999999972 10 022344556788889999999888
No 71
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=36.42 E-value=68 Score=26.27 Aligned_cols=50 Identities=10% Similarity=0.030 Sum_probs=33.1
Q ss_pred HHHHHhcCCCEEEe-cccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 79 PAMLVDVGIDWVIL-GHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 79 ~~mLkd~G~~~vii-GHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
+..+.+.|++++.+ ||--|....+..+-..-..++.++..+ .||+.-|--
T Consensus 243 a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~-ipVia~GGI 293 (368)
T 2nli_A 243 ADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKR-VPIVFDSGV 293 (368)
T ss_dssp HHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTS-SCEEECSSC
T ss_pred HHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCC-CeEEEECCC
Confidence 67888999999888 465444555666666666666665433 466666643
No 72
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=36.29 E-value=1.3e+02 Score=24.32 Aligned_cols=76 Identities=16% Similarity=0.171 Sum_probs=44.0
Q ss_pred CeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccc----cCHHHHHhcCCCEEEecccccccccCCC-hHHHH
Q psy7461 35 KVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGE----LSPAMLVDVGIDWVILGHSERRNVFGEP-DSLIA 109 (149)
Q Consensus 35 ~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGe----iS~~mLkd~G~~~viiGHSERR~~~~Et-d~~i~ 109 (149)
+++-+||+|.- +..+.+.++..+.+-.--+.+ .|+-.|+ .++....+.|+++.++| |-.|+-. -....
T Consensus 171 G~dGvV~s~~E-~~~IR~~~~~~fl~VTPGIr~--qG~~~~DQ~Rv~t~~~a~~aGAd~iVvG----r~I~~a~dp~~a~ 243 (303)
T 3ru6_A 171 GLDGMVCSVFE-SKKIKEHTSSNFLTLTPGIRP--FGETNDDQKRVANLAMARENLSDYIVVG----RPIYKNENPRAVC 243 (303)
T ss_dssp TCSEEECCTTT-HHHHHHHSCTTSEEEECCCCT--TC--------CCSHHHHHHTTCSEEEEC----HHHHTSSCHHHHH
T ss_pred CCCEEEECHHH-HHHHHHhCCCccEEECCCcCc--ccCCcccccccCCHHHHHHcCCCEEEEC----hHHhCCCCHHHHH
Confidence 46667886643 556666654444332333332 3445565 48889999999999999 5666543 34455
Q ss_pred HHHHHHHH
Q psy7461 110 EKVAHALE 117 (149)
Q Consensus 110 ~Kv~~al~ 117 (149)
++++..++
T Consensus 244 ~~i~~~i~ 251 (303)
T 3ru6_A 244 EKILNKIH 251 (303)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 56665554
No 73
>2wag_A Lysozyme, putative; hydrolase, GH25, lysin; 1.40A {Bacillus anthracis}
Probab=35.69 E-value=37 Score=25.73 Aligned_cols=48 Identities=15% Similarity=0.302 Sum_probs=37.9
Q ss_pred CcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeE
Q psy7461 72 AFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNV 122 (149)
Q Consensus 72 a~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~p 122 (149)
.|.|.|....|+..|+++|+|==+|-..+. |+....-++.|.++||..
T Consensus 23 ~~Qg~idw~~vk~~gi~FviiKateG~~~~---D~~f~~n~~~A~~aGl~v 70 (220)
T 2wag_A 23 SYQGDIDWRELEKQNMKFAFIKATEGSAFV---DKYFSKNWTNANKTSMRV 70 (220)
T ss_dssp GGGCSCCHHHHHTTTCCEEEEEEEETTTEE---CTTHHHHHHHHHTSSSEE
T ss_pred CCCCCCCHHHHHHCCCCEEEEEEecCCCcc---ChHHHHHHHHHHHCCCeE
Confidence 477899999999999999999666655443 455666788999999853
No 74
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=35.25 E-value=32 Score=32.31 Aligned_cols=49 Identities=14% Similarity=0.085 Sum_probs=39.1
Q ss_pred HHHHHhcCCCEEEe-----cccccccccCCC-hHHHHHHHHHHHHCCCeEEEEeC
Q psy7461 79 PAMLVDVGIDWVIL-----GHSERRNVFGEP-DSLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 79 ~~mLkd~G~~~vii-----GHSERR~~~~Et-d~~i~~Kv~~al~~gl~pIlCiG 127 (149)
..++|++|++.|-+ -|-.++--|.-+ ...+.+=++.|.++||-+|++.|
T Consensus 42 l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~Gl~ViLr~G 96 (971)
T 1tg7_A 42 FEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPG 96 (971)
T ss_dssp HHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHHHHHHcCCEEEEecC
Confidence 47899999999999 787777666554 23344557999999999999998
No 75
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=34.56 E-value=31 Score=23.26 Aligned_cols=41 Identities=15% Similarity=0.188 Sum_probs=30.4
Q ss_pred cccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeC
Q psy7461 75 GELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 75 GeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiG 127 (149)
|.-.+..|++.||+.+|.|+=-.+ . .....+.|+.++.+..
T Consensus 56 g~~~~~~l~~~gv~~vi~~~iG~~--------a----~~~L~~~GI~v~~~~~ 96 (120)
T 2wfb_A 56 GINAAQVLAKSGAGVLLTGYVGPK--------A----FQALQAAGIKVGQDLE 96 (120)
T ss_dssp HHHHHHHHHHHTEEEEECSCCCHH--------H----HHHHHHTTCEEECCCT
T ss_pred hHHHHHHHHHCCCCEEEECCCCHh--------H----HHHHHHCCCEEEEcCC
Confidence 556788999999999999963322 1 2556688999997654
No 76
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=33.80 E-value=64 Score=25.24 Aligned_cols=56 Identities=14% Similarity=0.093 Sum_probs=38.7
Q ss_pred HHHHHhcCCCEEEecc----ccccccc--CCChHHHHHHHHHHHHCCCeEEEEe-----CCCHHHHh
Q psy7461 79 PAMLVDVGIDWVILGH----SERRNVF--GEPDSLIAEKVAHALETGLNVVACI-----GEKLEERE 134 (149)
Q Consensus 79 ~~mLkd~G~~~viiGH----SERR~~~--~Etd~~i~~Kv~~al~~gl~pIlCi-----GE~~e~r~ 134 (149)
...|++.|++.+.+|. .|.+..+ +.+-+.+-+-++.+.+.|+.+-..+ ||+.++..
T Consensus 145 l~~L~~ag~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~ 211 (348)
T 3iix_A 145 YEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLV 211 (348)
T ss_dssp HHHHHHHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHH
T ss_pred HHHHHHhCCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHH
Confidence 4567888999998874 2322221 2477888888999999999643332 78887765
No 77
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=32.84 E-value=65 Score=28.58 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=35.2
Q ss_pred CHHHHHhcCCCEEEecc-c----ccc-cccCCChHHHHHHHHHHHHCCCeEEEEeC
Q psy7461 78 SPAMLVDVGIDWVILGH-S----ERR-NVFGEPDSLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 78 S~~mLkd~G~~~viiGH-S----ERR-~~~~Etd~~i~~Kv~~al~~gl~pIlCiG 127 (149)
-..++|++|++.+-+++ + |.+ -.|+ =+.+.+=+..|.++||.+|++.+
T Consensus 28 Dl~~mk~~G~n~vr~~if~W~~~eP~~g~~~--f~~ld~~i~~~~~~Gi~vil~~~ 81 (675)
T 3tty_A 28 DMRMFNLAGIDVATVNVFSWAKIQRDEVSYD--FTWLDDIIERLTKENIYLCLATS 81 (675)
T ss_dssp HHHHHHHHTCCEEEECSSCHHHHBSSSSCBC--CHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHcCCCEEEEeeechhhhCCcCCccC--HHHHHHHHHHHHHCCCEEEEeCC
Confidence 35689999999999987 3 221 1121 14566668999999999999986
No 78
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=32.50 E-value=61 Score=24.40 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=23.8
Q ss_pred HHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCe
Q psy7461 82 LVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLN 121 (149)
Q Consensus 82 Lkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~ 121 (149)
+.+.|. ..++||.||-..+.+..+. ++.+.+.|+.
T Consensus 129 i~~~g~-~~vlaHp~r~~~~~~~~~~----l~~l~~~G~~ 163 (247)
T 2wje_A 129 ILMLGI-TPVIAHIERYDALENNEKR----VRELIDMGCY 163 (247)
T ss_dssp HHTTTC-EEEETTGGGCGGGTTCHHH----HHHHHHTTCE
T ss_pred HHHCCC-cEEEEehhhHHHHhhCHHH----HHHHHHCCCE
Confidence 444444 6789999987766655444 5777788876
No 79
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=31.47 E-value=82 Score=23.01 Aligned_cols=63 Identities=16% Similarity=0.227 Sum_probs=42.0
Q ss_pred cccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHC-CCeEEEEeCCCHHHHhcCChHHHHHH
Q psy7461 75 GELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALET-GLNVVACIGEKLEEREAGQTEAVVYK 144 (149)
Q Consensus 75 GeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~-gl~pIlCiGE~~e~r~~g~~~~v~~~ 144 (149)
|..-+++|++.|++.+-. ....++-+.|...++.+++. +...|++.|=+--.. ...|.+++.+
T Consensus 42 ~~~L~~~l~~~G~~v~~~------~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~-~D~t~eal~~ 105 (178)
T 2pjk_A 42 GDIIKQLLIENGHKIIGY------SLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP-TDITVETIRK 105 (178)
T ss_dssp HHHHHHHHHHTTCEEEEE------EEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST-TCCHHHHHGG
T ss_pred HHHHHHHHHHCCCEEEEE------EEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC-CcchHHHHHH
Confidence 445578999999876533 34566678899999999876 588888888542211 2345555543
No 80
>3cdw_H Protein 3B, VPG; RNA-dependent RNA polymerase, protein primer vizier viral enzymes involved in replication, transferase-V protein complex; 2.50A {Coxsackievirus B3} PDB: 2bbl_A 2bbp_A
Probab=30.85 E-value=13 Score=19.55 Aligned_cols=8 Identities=50% Similarity=0.829 Sum_probs=6.0
Q ss_pred CCcccccC
Q psy7461 71 GAFTGELS 78 (149)
Q Consensus 71 Ga~TGeiS 78 (149)
|||||...
T Consensus 1 G~YsG~p~ 8 (26)
T 3cdw_H 1 GAYTGVPN 8 (26)
T ss_pred CCccCCCc
Confidence 78998654
No 81
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=30.72 E-value=1.2e+02 Score=24.38 Aligned_cols=52 Identities=10% Similarity=0.066 Sum_probs=39.7
Q ss_pred CHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 78 SPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 78 S~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
....|++.|++.|=+-|++.-.+-...-+.+.+=|..|.++||.+|+-+-..
T Consensus 59 ~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~ 110 (345)
T 3jug_A 59 AIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNKMVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 5678999999999998875432222334666677899999999999988654
No 82
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=30.03 E-value=54 Score=22.80 Aligned_cols=22 Identities=14% Similarity=0.098 Sum_probs=19.8
Q ss_pred CChHHHHHHHHHHHHCCCeEEE
Q psy7461 103 EPDSLIAEKVAHALETGLNVVA 124 (149)
Q Consensus 103 Etd~~i~~Kv~~al~~gl~pIl 124 (149)
=||+.|.+.|..+++.|..|-+
T Consensus 22 lt~eqI~kQV~Yll~qGw~p~i 43 (110)
T 1svd_M 22 MNAERIRAQIKYAIAQGWSPGI 43 (110)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCeeEE
Confidence 4899999999999999998755
No 83
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=29.99 E-value=89 Score=27.22 Aligned_cols=46 Identities=22% Similarity=0.301 Sum_probs=33.7
Q ss_pred HHHHHhcCCCEEEecc-c----cc-ccccCCChHHHHHHHHHHHHCCCeEEEEe
Q psy7461 79 PAMLVDVGIDWVILGH-S----ER-RNVFGEPDSLIAEKVAHALETGLNVVACI 126 (149)
Q Consensus 79 ~~mLkd~G~~~viiGH-S----ER-R~~~~Etd~~i~~Kv~~al~~gl~pIlCi 126 (149)
.++||++|++.+-+++ + |- .-.|+ -+.+.+=+..|.++||.+|++.
T Consensus 20 l~~mk~~G~N~vR~~if~W~~~eP~~g~~d--~~~ld~~ld~a~~~Gi~vil~~ 71 (645)
T 1kwg_A 20 ARRMREAGLSHVRIGEFAWALLEPEPGRLE--WGWLDEAIATLAAEGLKVVLGT 71 (645)
T ss_dssp HHHHHHHTCCEEEECTTCHHHHCSBTTBCC--CHHHHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHcCCCEEEEeeechhhcCCCCCccC--hHHHHHHHHHHHHCCCEEEEeC
Confidence 5689999999999997 2 11 11122 2345566899999999999998
No 84
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=29.35 E-value=52 Score=24.81 Aligned_cols=46 Identities=24% Similarity=0.304 Sum_probs=37.4
Q ss_pred HHHHHhcCCCEEEeccccc--ccccCCChHHHHHHHHHHHHCCCeEEEE
Q psy7461 79 PAMLVDVGIDWVILGHSER--RNVFGEPDSLIAEKVAHALETGLNVVAC 125 (149)
Q Consensus 79 ~~mLkd~G~~~viiGHSER--R~~~~Etd~~i~~Kv~~al~~gl~pIlC 125 (149)
...|++.|+- .-+++|-- +..++|+...+.+-.+.+++.|+..++-
T Consensus 154 l~~l~~~G~~-lEiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~~G 201 (247)
T 2wje_A 154 VRELIDMGCY-TQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIA 201 (247)
T ss_dssp HHHHHHTTCE-EEEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHCCCE-EEEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEEEE
Confidence 4667788996 88999887 6778988888888889999999987643
No 85
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=29.18 E-value=66 Score=25.71 Aligned_cols=50 Identities=16% Similarity=0.069 Sum_probs=36.0
Q ss_pred hhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcC-CCEEEeccccccccc
Q psy7461 45 IYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVG-IDWVILGHSERRNVF 101 (149)
Q Consensus 45 ~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G-~~~viiGHSERR~~~ 101 (149)
..+..+.+.+..++++-+ |+... ...|.+.|+++| ++.|+.|.+--|...
T Consensus 193 ~~~~~i~~~~~~~vP~i~-n~~~~------~~~~~~eL~~lG~v~~v~~~~~~~raa~ 243 (290)
T 2hjp_A 193 DEILAFVKSWPGKVPLVL-VPTAY------PQLTEADIAALSKVGIVIYGNHAIRAAV 243 (290)
T ss_dssp HHHHHHHHHCCCSSCEEE-CGGGC------TTSCHHHHHTCTTEEEEEECSHHHHHHH
T ss_pred HHHHHHHHHcCCCCCEEE-eccCC------CCCCHHHHHhcCCeeEEEechHHHHHHH
Confidence 556667777654466666 65421 235899999999 999999999777544
No 86
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=28.89 E-value=64 Score=25.16 Aligned_cols=12 Identities=33% Similarity=0.454 Sum_probs=5.6
Q ss_pred HhcCCCEEEecc
Q psy7461 83 VDVGIDWVILGH 94 (149)
Q Consensus 83 kd~G~~~viiGH 94 (149)
.+.||+..|-|+
T Consensus 195 ~~~gaD~~ITGd 206 (267)
T 2fyw_A 195 LAKGADVYITGD 206 (267)
T ss_dssp HHTTCSEEEESC
T ss_pred HHcCCCEEEEcc
Confidence 334555555443
No 87
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=28.85 E-value=86 Score=23.27 Aligned_cols=63 Identities=16% Similarity=0.169 Sum_probs=42.1
Q ss_pred cccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHH
Q psy7461 75 GELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKLEEREAGQTEAVVYK 144 (149)
Q Consensus 75 GeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~e~r~~g~~~~v~~~ 144 (149)
|..-+++|++.|++.+-. ....++-+.|...++.+++.+...|++.|-+--. ....|.+++.+
T Consensus 51 ~~~L~~~L~~~G~~v~~~------~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g-~~D~t~eal~~ 113 (185)
T 3rfq_A 51 GPLVTELLTEAGFVVDGV------VAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVT-PRDVTPESTRE 113 (185)
T ss_dssp HHHHHHHHHHTTEEEEEE------EEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSS-TTCCHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEEE------EEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-CcccHHHHHHH
Confidence 445578899998775533 3456677889999999887778888888865221 12345555543
No 88
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=28.73 E-value=39 Score=26.17 Aligned_cols=24 Identities=29% Similarity=0.497 Sum_probs=15.7
Q ss_pred cccccCH---HHHHhcCCCEEEecccc
Q psy7461 73 FTGELSP---AMLVDVGIDWVILGHSE 96 (149)
Q Consensus 73 ~TGeiS~---~mLkd~G~~~viiGHSE 96 (149)
-|||++- ...++.|...+.+||.+
T Consensus 191 iTGd~~~h~~~~a~e~gi~~i~~GH~~ 217 (247)
T 1nmo_A 191 ITGEVSEQTIHSAREQGLHFYAAGHHA 217 (247)
T ss_dssp EESCCCHHHHHHHHHTTCEEEECCHHH
T ss_pred EEcCccHHHHHHHHHCCCeEEEcCCHH
Confidence 3666666 44556677777777753
No 89
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=28.39 E-value=46 Score=23.11 Aligned_cols=22 Identities=23% Similarity=0.365 Sum_probs=19.8
Q ss_pred CChHHHHHHHHHHHHCCCeEEE
Q psy7461 103 EPDSLIAEKVAHALETGLNVVA 124 (149)
Q Consensus 103 Etd~~i~~Kv~~al~~gl~pIl 124 (149)
=||+.|.+.|..+++.|..|-+
T Consensus 20 lt~eqI~kQI~Yll~qGw~p~l 41 (109)
T 1rbl_M 20 LSDRQIAAQIEYMIEQGFHPLI 41 (109)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 4899999999999999998765
No 90
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=28.38 E-value=1.5e+02 Score=24.32 Aligned_cols=50 Identities=12% Similarity=0.043 Sum_probs=31.1
Q ss_pred HHHHHhcCCCEEEe-cccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 79 PAMLVDVGIDWVIL-GHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 79 ~~mLkd~G~~~vii-GHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
+..+.+.|++++++ ||.-|....+-.+-..-..+..++... .||+.-|--
T Consensus 231 A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~-ipVia~GGI 281 (352)
T 3sgz_A 231 AELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGK-IEVYMDGGV 281 (352)
T ss_dssp HHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTS-SEEEEESSC
T ss_pred HHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCC-CeEEEECCC
Confidence 78899999999887 564443333445545555555555433 567776643
No 91
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=28.38 E-value=58 Score=23.30 Aligned_cols=25 Identities=4% Similarity=-0.105 Sum_probs=21.3
Q ss_pred CChHHHHHHHHHHHHCCCeEEEEeC
Q psy7461 103 EPDSLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 103 Etd~~i~~Kv~~al~~gl~pIlCiG 127 (149)
=||+.|.+.|..+++.|..|-+=-.
T Consensus 21 lt~eqI~kQI~Yll~qGw~p~lEf~ 45 (128)
T 1wdd_S 21 LTVEDLLKQIEYLLRSKWVPCLEFS 45 (128)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCeeeEEec
Confidence 4899999999999999998765443
No 92
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=28.33 E-value=1.2e+02 Score=21.92 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=35.3
Q ss_pred ccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHC-CCeEEEEeCCC
Q psy7461 76 ELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALET-GLNVVACIGEK 129 (149)
Q Consensus 76 eiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~-gl~pIlCiGE~ 129 (149)
..-+++|++.|++.+- .....++-+.|.+.++.+++. +-..|++.|=+
T Consensus 31 ~~l~~~L~~~G~~v~~------~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~ 79 (172)
T 1mkz_A 31 HYLRDSAQEAGHHVVD------KAIVKENRYAIRAQVSAWIASDDVQVVLITGGT 79 (172)
T ss_dssp HHHHHHHHHTTCEEEE------EEEECSCHHHHHHHHHHHHHSSSCCEEEEESCC
T ss_pred HHHHHHHHHCCCeEeE------EEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCC
Confidence 3347889999986542 344566778899999999986 57788888754
No 93
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=28.05 E-value=86 Score=27.61 Aligned_cols=44 Identities=16% Similarity=0.129 Sum_probs=34.0
Q ss_pred HHHHhcCCCEEEec-----ccccccccCCChHHHHHHHHHHHHCCCeEEEE
Q psy7461 80 AMLVDVGIDWVILG-----HSERRNVFGEPDSLIAEKVAHALETGLNVVAC 125 (149)
Q Consensus 80 ~mLkd~G~~~viiG-----HSERR~~~~Etd~~i~~Kv~~al~~gl~pIlC 125 (149)
.++|++|++.|-++ |--.+--|+-+ .+.+=++.|.++||.+|++
T Consensus 80 ~~mKa~G~NtVr~~V~W~~hEP~~G~yDF~--~LD~~ldla~e~GL~VIL~ 128 (552)
T 3u7v_A 80 PAIEKVGANTVQVPIAWEQIEPVEGQFDFS--YLDLLLEQARERKVRLVLL 128 (552)
T ss_dssp HHHHHHTCSEEEEEEEHHHHCSBTTBCCCH--HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhCCCEEEEEehhhccCCCCCccChh--hHHHHHHHHHHCCCEEEEE
Confidence 48999999999998 65544444432 2556689999999999997
No 94
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=28.02 E-value=31 Score=27.42 Aligned_cols=71 Identities=23% Similarity=0.221 Sum_probs=43.1
Q ss_pred CeEEEEecch---hhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHH
Q psy7461 35 KVEVVVGVPA---IYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEK 111 (149)
Q Consensus 35 ~~~v~i~P~~---~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~K 111 (149)
+.+.++.|.. ..+..+.+.+. +++ |+-. .++-.|.+.|+++|++.++.|.+--|.... .+.+-
T Consensus 181 GAd~i~~e~~~~~~~~~~i~~~~~--~P~---n~~~-----~~~~~~~~eL~~lGv~~v~~~~~~~raa~~----a~~~~ 246 (275)
T 2ze3_A 181 GADGIFVPLALQSQDIRALADALR--VPL---NVMA-----FPGSPVPRALLDAGAARVSFGQSLMLATLG----LVQRM 246 (275)
T ss_dssp TCSEEECTTCCCHHHHHHHHHHCS--SCE---EEEC-----CTTSCCHHHHHHTTCSEEECTTHHHHHHHH----HHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHhcC--CCE---EEec-----CCCCCCHHHHHHcCCcEEEEChHHHHHHHH----HHHHH
Confidence 4555555533 34555555553 333 3321 135788999999999999999998776542 33333
Q ss_pred HHHHHHCC
Q psy7461 112 VAHALETG 119 (149)
Q Consensus 112 v~~al~~g 119 (149)
.+..++.|
T Consensus 247 ~~~i~~~g 254 (275)
T 2ze3_A 247 AAELHAAE 254 (275)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhC
Confidence 44445545
No 95
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=28.01 E-value=1.8e+02 Score=21.35 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=14.0
Q ss_pred eeeeecccccCCCCCcccccCHHHHHhcCCCEEEec
Q psy7461 58 VAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILG 93 (149)
Q Consensus 58 i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiG 93 (149)
+++|.|..++.+ ++=+-..+.++++|.+++-+.
T Consensus 18 ~klg~~~~~~~~---~~~~~~l~~~~~~G~~~vEl~ 50 (257)
T 3lmz_A 18 FHLGMAGYTFVN---FDLDTTLKTLERLDIHYLCIK 50 (257)
T ss_dssp SEEEECGGGGTT---SCHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEEEEEeecC---CCHHHHHHHHHHhCCCEEEEe
Confidence 444444444332 122333444455555555443
No 96
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=27.21 E-value=1.4e+02 Score=23.28 Aligned_cols=50 Identities=16% Similarity=0.070 Sum_probs=34.2
Q ss_pred CHHHHHhcCCCEEEecccccccc-------cCC-----------ChHHHHHHHHHHHHCCCeEEEEeC
Q psy7461 78 SPAMLVDVGIDWVILGHSERRNV-------FGE-----------PDSLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 78 S~~mLkd~G~~~viiGHSERR~~-------~~E-----------td~~i~~Kv~~al~~gl~pIlCiG 127 (149)
..+.|++.|++.|=+.++-.+.. +++ .-+.+.+=|..|.++||.+|+.+-
T Consensus 49 ~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h 116 (358)
T 1ece_A 49 MLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRH 116 (358)
T ss_dssp HHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecC
Confidence 35678999999988877643321 111 113445558999999999999884
No 97
>3hmc_A Putative prophage lambdaba04, glycosyl hydrolase, 25; endolysin; HET: MES; 1.44A {Bacillus anthracis} SCOP: c.1.8.0 PDB: 2nw0_A
Probab=26.97 E-value=46 Score=24.57 Aligned_cols=46 Identities=20% Similarity=0.346 Sum_probs=35.9
Q ss_pred CcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCe
Q psy7461 72 AFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLN 121 (149)
Q Consensus 72 a~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~ 121 (149)
.|.|.|... ++..|+++|+|==+|-..+. |.....-++.|.++||.
T Consensus 12 ~~Qg~idw~-~~~~gi~FviiKateG~~~~---D~~f~~n~~~A~~aGl~ 57 (192)
T 3hmc_A 12 KWNGDINWS-IAKQHIDFIIARVQDGSNYV---DPLYKGYVQAMKQHGIP 57 (192)
T ss_dssp GGGCSCCHH-HHGGGEEEEEEEEEESTTCB---CSSHHHHHHHHHHTTCC
T ss_pred CCCCCCCHH-HHhCCCCEEEEEEeeCCCcc---ChHHHHHHHHHHHcCCe
Confidence 467889999 78899999999877765443 45556668888899986
No 98
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=26.97 E-value=1.8e+02 Score=22.11 Aligned_cols=54 Identities=19% Similarity=0.155 Sum_probs=35.7
Q ss_pred ccCHHHHHhcCCCEEEecccccccc-------cCCC-hHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 76 ELSPAMLVDVGIDWVILGHSERRNV-------FGEP-DSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 76 eiS~~mLkd~G~~~viiGHSERR~~-------~~Et-d~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
+-..+.|++.|++.|=+.-+=.+.. ++++ -+.+.+-+..|.++||.+|+.+-..
T Consensus 36 ~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vild~h~~ 97 (317)
T 3aof_A 36 DEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHY 97 (317)
T ss_dssp THHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred HHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 3356778999999998864322111 1111 2345666899999999999998643
No 99
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=26.67 E-value=1.1e+02 Score=24.87 Aligned_cols=51 Identities=20% Similarity=0.180 Sum_probs=32.2
Q ss_pred CHHHHHhcCCCEEEe-cccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 78 SPAMLVDVGIDWVIL-GHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 78 S~~mLkd~G~~~vii-GHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
-+..+.+.|++++.+ ||.-|....+..+-..-..+..++..+ .||+..|--
T Consensus 238 ~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~-ipvia~GGI 289 (370)
T 1gox_A 238 DARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGR-IPVFLDGGV 289 (370)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTS-SCEEEESSC
T ss_pred HHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCC-CEEEEECCC
Confidence 467888999999988 466554444455555555555554323 567776643
No 100
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=26.54 E-value=51 Score=23.22 Aligned_cols=22 Identities=23% Similarity=0.377 Sum_probs=19.5
Q ss_pred CChHHHHHHHHHHHHCCCeEEE
Q psy7461 103 EPDSLIAEKVAHALETGLNVVA 124 (149)
Q Consensus 103 Etd~~i~~Kv~~al~~gl~pIl 124 (149)
=||+.|.+.|..+++.|..|-+
T Consensus 19 Lt~eqI~kQV~yll~qGw~~~l 40 (118)
T 3zxw_B 19 LSDAQIARQIQYAIDQGYHPCV 40 (118)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHhCCCeeEE
Confidence 3799999999999999998754
No 101
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=26.32 E-value=54 Score=25.28 Aligned_cols=13 Identities=23% Similarity=0.557 Sum_probs=6.6
Q ss_pred HhcCCCEEEeccc
Q psy7461 83 VDVGIDWVILGHS 95 (149)
Q Consensus 83 kd~G~~~viiGHS 95 (149)
++.|...+.+||.
T Consensus 199 ~e~gi~~i~~GH~ 211 (242)
T 2yyb_A 199 FERGLNVIYAGHY 211 (242)
T ss_dssp HHTTCEEEECCHH
T ss_pred HHCCCeEEECCcH
Confidence 3445555555554
No 102
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=26.18 E-value=2.1e+02 Score=21.61 Aligned_cols=21 Identities=29% Similarity=0.729 Sum_probs=17.2
Q ss_pred CHHHHHhcCCCEEEecccccccccC
Q psy7461 78 SPAMLVDVGIDWVILGHSERRNVFG 102 (149)
Q Consensus 78 S~~mLkd~G~~~viiGHSERR~~~~ 102 (149)
++..+.+.|++++++| |-.|.
T Consensus 206 t~~~a~~aGad~iVvG----r~I~~ 226 (245)
T 1eix_A 206 TPEQALSAGVDYMVIG----RPVTQ 226 (245)
T ss_dssp CHHHHHHTTCSEEEEC----HHHHT
T ss_pred CHHHHHHcCCCEEEEC----HHHcC
Confidence 6788889999999999 44554
No 103
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=26.05 E-value=1.8e+02 Score=24.34 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=37.6
Q ss_pred CHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCC
Q psy7461 78 SPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGE 128 (149)
Q Consensus 78 S~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE 128 (149)
....|++.|++.|=|-|+..-.+-.+.-+.+.+=|..|.++||.+||-+-.
T Consensus 44 di~~ik~~G~N~VRipv~~g~~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH~ 94 (464)
T 1wky_A 44 AIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAEDNNLVAVLEVHD 94 (464)
T ss_dssp HHHHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHCCCCEEEEEcCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 467889999999988887422222233356777789999999999998754
No 104
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=26.03 E-value=82 Score=25.19 Aligned_cols=65 Identities=14% Similarity=0.332 Sum_probs=41.8
Q ss_pred CCCCcccccCHHHHHhcCCCEEEeccccccccc-----CCChHHHHHHHHHHHHCCCeE----EEEeCCCHHHHh
Q psy7461 69 PKGAFTGELSPAMLVDVGIDWVILGHSERRNVF-----GEPDSLIAEKVAHALETGLNV----VACIGEKLEERE 134 (149)
Q Consensus 69 ~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~-----~Etd~~i~~Kv~~al~~gl~p----IlCiGE~~e~r~ 134 (149)
..|..|-| ..+.|+++|++.+-+|--=....| .-+-+.+-+-++.+.+.|+.. |+-.||+.+++.
T Consensus 153 t~G~l~~e-~l~~L~~aGvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~~ 226 (369)
T 1r30_A 153 TLGTLSES-QAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRA 226 (369)
T ss_dssp ECSSCCHH-HHHHHHHHCCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHH
T ss_pred ecCCCCHH-HHHHHHHCCCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHHH
Confidence 45655544 367789999999987631111111 245677778888898888843 333478888776
No 105
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=25.70 E-value=1.1e+02 Score=21.97 Aligned_cols=62 Identities=18% Similarity=0.176 Sum_probs=41.0
Q ss_pred cccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHH-CCCeEEEEeCCCHHHHhcCChHHHHH
Q psy7461 75 GELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALE-TGLNVVACIGEKLEEREAGQTEAVVY 143 (149)
Q Consensus 75 GeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~-~gl~pIlCiGE~~e~r~~g~~~~v~~ 143 (149)
|..-+++|++.|++.+- .....++-+.|...++.+++ .+-..|++.|=+--. ....|.+++.
T Consensus 33 ~~~l~~~L~~~G~~v~~------~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g-~~D~t~ea~~ 95 (169)
T 1y5e_A 33 GQLLHELLKEAGHKVTS------YEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT-KRDVTIEAVS 95 (169)
T ss_dssp HHHHHHHHHHHTCEEEE------EEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS-TTCCHHHHHH
T ss_pred HHHHHHHHHHCCCeEeE------EEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC-CCCCcHHHHH
Confidence 44457889999987543 34456777889999999987 367788888865222 1234555554
No 106
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=25.38 E-value=32 Score=26.38 Aligned_cols=14 Identities=29% Similarity=0.460 Sum_probs=10.2
Q ss_pred hcCC-CEEEeccccc
Q psy7461 84 DVGI-DWVILGHSER 97 (149)
Q Consensus 84 d~G~-~~viiGHSER 97 (149)
..|. ++.|+|||-=
T Consensus 94 ~~~~~~~~lvGHSmG 108 (250)
T 3lp5_A 94 TYHFNHFYALGHSNG 108 (250)
T ss_dssp TSCCSEEEEEEETHH
T ss_pred HcCCCCeEEEEECHh
Confidence 3376 5789999964
No 107
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=25.13 E-value=28 Score=27.72 Aligned_cols=16 Identities=13% Similarity=0.310 Sum_probs=8.9
Q ss_pred HHHHHHCCCeEEEEeC
Q psy7461 112 VAHALETGLNVVACIG 127 (149)
Q Consensus 112 v~~al~~gl~pIlCiG 127 (149)
+.++.++|.+.|+++|
T Consensus 53 l~~~~~aGV~~iv~~~ 68 (330)
T 2ob3_A 53 LRRARAAGVRTIVDVS 68 (330)
T ss_dssp HHHHHHTTCCEEEECC
T ss_pred HHHHHHcCCCEEEeCC
Confidence 4555555555555555
No 108
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=25.00 E-value=36 Score=24.67 Aligned_cols=16 Identities=25% Similarity=0.401 Sum_probs=12.2
Q ss_pred HHHhcCC-CEEEecccc
Q psy7461 81 MLVDVGI-DWVILGHSE 96 (149)
Q Consensus 81 mLkd~G~-~~viiGHSE 96 (149)
.|..+|. +.+|+|||-
T Consensus 81 ~l~~l~~~~~~lvGhS~ 97 (275)
T 1a88_A 81 LTEALDLRGAVHIGHST 97 (275)
T ss_dssp HHHHHTCCSEEEEEETH
T ss_pred HHHHcCCCceEEEEecc
Confidence 4556676 699999994
No 109
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=24.85 E-value=2.3e+02 Score=23.35 Aligned_cols=45 Identities=18% Similarity=0.084 Sum_probs=30.3
Q ss_pred chhhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEecc
Q psy7461 43 PAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGH 94 (149)
Q Consensus 43 ~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGH 94 (149)
+...|..+.+.+.++++|-+ +-|=.||+=-.++|. +||+.|.+|=
T Consensus 293 ~~~~l~~v~~av~~~ipVia------~GGI~~g~Dv~kala-lGAd~V~iGr 337 (392)
T 2nzl_A 293 TIDVLPEIVEAVEGKVEVFL------DGGVRKGTDVLKALA-LGAKAVFVGR 337 (392)
T ss_dssp HHHHHHHHHHHHTTSSEEEE------CSSCCSHHHHHHHHH-TTCSEEEECH
T ss_pred hHHHHHHHHHHcCCCCEEEE------ECCCCCHHHHHHHHH-hCCCeeEECH
Confidence 33455666555433444432 567788888888887 8999999993
No 110
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=24.82 E-value=43 Score=24.03 Aligned_cols=21 Identities=19% Similarity=0.280 Sum_probs=16.9
Q ss_pred HHHHhcCCCEEEecccccccc
Q psy7461 80 AMLVDVGIDWVILGHSERRNV 100 (149)
Q Consensus 80 ~mLkd~G~~~viiGHSERR~~ 100 (149)
+.+++.|+++++.||+=+...
T Consensus 133 ~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 133 EIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp HHHHHTTCSEEEECCCCCCSC
T ss_pred HHHHHcCCcEEEECCcCCCCc
Confidence 456778999999999977654
No 111
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=24.80 E-value=75 Score=25.10 Aligned_cols=66 Identities=15% Similarity=0.157 Sum_probs=43.1
Q ss_pred cccC---HHHHHhcCCCEEEeccc----cccccc--CCChHHHHHHHHHHHHCCCeE----EEEeCCCHHHHhcCChHHH
Q psy7461 75 GELS---PAMLVDVGIDWVILGHS----ERRNVF--GEPDSLIAEKVAHALETGLNV----VACIGEKLEEREAGQTEAV 141 (149)
Q Consensus 75 GeiS---~~mLkd~G~~~viiGHS----ERR~~~--~Etd~~i~~Kv~~al~~gl~p----IlCiGE~~e~r~~g~~~~v 141 (149)
|.++ ...|+++|++.+.+|.- |-|..+ +-+-+.+-+-++.+.+.|+.+ |+-.||+.+++.. +.+.
T Consensus 148 g~~~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~~--~l~~ 225 (350)
T 3t7v_A 148 GLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTIL--SLRG 225 (350)
T ss_dssp SSCCHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHHH--HHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHHH--HHHH
Confidence 4455 56789999999887742 222211 346677777789999999862 2334899888763 4444
Q ss_pred H
Q psy7461 142 V 142 (149)
Q Consensus 142 ~ 142 (149)
+
T Consensus 226 l 226 (350)
T 3t7v_A 226 M 226 (350)
T ss_dssp H
T ss_pred H
Confidence 4
No 112
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=24.66 E-value=38 Score=25.24 Aligned_cols=17 Identities=35% Similarity=0.555 Sum_probs=12.7
Q ss_pred HHHHhcCC-CEEEecccc
Q psy7461 80 AMLVDVGI-DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~-~~viiGHSE 96 (149)
+.|..+|. +.+|+|||-
T Consensus 91 ~ll~~l~~~~~~lvGhS~ 108 (294)
T 1ehy_A 91 ALLDALGIEKAYVVGHDF 108 (294)
T ss_dssp HHHHHTTCCCEEEEEETH
T ss_pred HHHHHcCCCCEEEEEeCh
Confidence 34566786 699999984
No 113
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=24.50 E-value=74 Score=23.02 Aligned_cols=22 Identities=14% Similarity=0.176 Sum_probs=19.8
Q ss_pred CChHHHHHHHHHHHHCCCeEEE
Q psy7461 103 EPDSLIAEKVAHALETGLNVVA 124 (149)
Q Consensus 103 Etd~~i~~Kv~~al~~gl~pIl 124 (149)
=||+.|.+.|..+++.|..|-+
T Consensus 14 ltdeqI~kQI~Yll~qGw~p~i 35 (138)
T 1bwv_S 14 LTDEQIKKQIDYMISKKLAIGI 35 (138)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCeeeE
Confidence 4899999999999999998755
No 114
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=24.06 E-value=41 Score=24.29 Aligned_cols=17 Identities=24% Similarity=0.520 Sum_probs=12.7
Q ss_pred HHHHhcCC-CEEEecccc
Q psy7461 80 AMLVDVGI-DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~-~~viiGHSE 96 (149)
..|..+|. +.+|+|||-
T Consensus 78 ~~l~~l~~~~~~lvGhS~ 95 (273)
T 1a8s_A 78 QLIEHLDLRDAVLFGFST 95 (273)
T ss_dssp HHHHHTTCCSEEEEEETH
T ss_pred HHHHHhCCCCeEEEEeCh
Confidence 34566776 699999994
No 115
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=23.76 E-value=52 Score=26.55 Aligned_cols=75 Identities=13% Similarity=0.006 Sum_probs=44.4
Q ss_pred CeEEEEecchhhHHHH---hhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHH
Q psy7461 35 KVEVVVGVPAIYLEYA---KCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEK 111 (149)
Q Consensus 35 ~~~v~i~P~~~~L~~~---~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~K 111 (149)
+.+.++.|.......+ .+.+. +++-+ |+- .|.-|...|.+.|+++|++.|+.|.+=-|.... .+.+-
T Consensus 184 GAD~if~~~~~~~ee~~~~~~~~~--~Pl~~-n~~---~~g~tp~~~~~eL~~lGv~~v~~~~~~~raa~~----a~~~~ 253 (298)
T 3eoo_A 184 GADMIFPEAMKTLDDYRRFKEAVK--VPILA-NLT---EFGSTPLFTLDELKGANVDIALYCCGAYRAMNK----AALNF 253 (298)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHHC--SCBEE-ECC---TTSSSCCCCHHHHHHTTCCEEEECSHHHHHHHH----HHHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHHHcC--CCeEE-Eec---cCCCCCCCCHHHHHHcCCeEEEEchHHHHHHHH----HHHHH
Confidence 4566666654444444 33332 23222 322 233467789999999999999999988776542 33333
Q ss_pred HHHHHHCC
Q psy7461 112 VAHALETG 119 (149)
Q Consensus 112 v~~al~~g 119 (149)
....++.|
T Consensus 254 ~~~i~~~g 261 (298)
T 3eoo_A 254 YETVRRDG 261 (298)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHcC
Confidence 44444444
No 116
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=23.73 E-value=42 Score=24.25 Aligned_cols=17 Identities=29% Similarity=0.575 Sum_probs=12.6
Q ss_pred HHHHhcCC-CEEEecccc
Q psy7461 80 AMLVDVGI-DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~-~~viiGHSE 96 (149)
+.+..+|. +.+|+|||-
T Consensus 78 ~~l~~l~~~~~~lvGhS~ 95 (274)
T 1a8q_A 78 DLLTDLDLRDVTLVAHSM 95 (274)
T ss_dssp HHHHHTTCCSEEEEEETT
T ss_pred HHHHHcCCCceEEEEeCc
Confidence 34566775 699999994
No 117
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=23.64 E-value=78 Score=22.96 Aligned_cols=23 Identities=22% Similarity=0.118 Sum_probs=20.2
Q ss_pred CChHHHHHHHHHHHHCCCeEEEE
Q psy7461 103 EPDSLIAEKVAHALETGLNVVAC 125 (149)
Q Consensus 103 Etd~~i~~Kv~~al~~gl~pIlC 125 (149)
=||+.|.+.|..+++.|..|-+=
T Consensus 21 lt~eqI~kQI~YlL~qGw~p~lE 43 (140)
T 1gk8_I 21 LTDEQIAAQVDYIVANGWIPCLE 43 (140)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEeeEE
Confidence 48999999999999999987653
No 118
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=23.57 E-value=2.2e+02 Score=24.30 Aligned_cols=51 Identities=20% Similarity=0.192 Sum_probs=32.5
Q ss_pred HHHHHhcCCCEEEe-cccccccccCCChHHHHHHHHHHHHC----CCeEEEEeCCC
Q psy7461 79 PAMLVDVGIDWVIL-GHSERRNVFGEPDSLIAEKVAHALET----GLNVVACIGEK 129 (149)
Q Consensus 79 ~~mLkd~G~~~vii-GHSERR~~~~Etd~~i~~Kv~~al~~----gl~pIlCiGE~ 129 (149)
+..+.+.|++++.+ ||.-|.....-.+-..-..+..++.. +=.||+.-|--
T Consensus 357 A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI 412 (511)
T 1kbi_A 357 VIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGV 412 (511)
T ss_dssp HHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSC
T ss_pred HHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCC
Confidence 78899999999888 46544333333444444556666642 23678887754
No 119
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=23.34 E-value=2.2e+02 Score=21.85 Aligned_cols=59 Identities=19% Similarity=0.142 Sum_probs=40.4
Q ss_pred CCcccccCHHHHHhcCCCEEEeccccccccc----CCCh----HHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 71 GAFTGELSPAMLVDVGIDWVILGHSERRNVF----GEPD----SLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 71 Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~----~Etd----~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
|.+.-+-....|++.|++.+=+.-+=.|..- ...| +.+.+=+..|.++||.+|+.+-..
T Consensus 39 ~~~~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~ 105 (320)
T 3nco_A 39 GVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHF 105 (320)
T ss_dssp SCCCCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred CCcCCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 4455566778899999999988754333320 1111 344555788999999999998754
No 120
>1mzw_B U4/U6 snRNP 60KDA protein; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens}
Probab=23.21 E-value=41 Score=18.16 Aligned_cols=16 Identities=25% Similarity=0.443 Sum_probs=11.8
Q ss_pred cccCCChHHHHHHHHH
Q psy7461 99 NVFGEPDSLIAEKVAH 114 (149)
Q Consensus 99 ~~~~Etd~~i~~Kv~~ 114 (149)
.+|||++..-...++.
T Consensus 14 ~lFGE~~~~Rr~RLr~ 29 (31)
T 1mzw_B 14 TLFGEGPAERRERLRN 29 (31)
T ss_dssp EETTCCHHHHHHHHHH
T ss_pred eecCCChHHHHHHHHH
Confidence 5799999887666554
No 121
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=22.93 E-value=44 Score=24.85 Aligned_cols=16 Identities=19% Similarity=0.432 Sum_probs=12.5
Q ss_pred HHHhcCC-CEEEecccc
Q psy7461 81 MLVDVGI-DWVILGHSE 96 (149)
Q Consensus 81 mLkd~G~-~~viiGHSE 96 (149)
.+..+|. +.+|+|||-
T Consensus 88 ll~~l~~~~~~lvGhS~ 104 (286)
T 2yys_A 88 LAEALGVERFGLLAHGF 104 (286)
T ss_dssp HHHHTTCCSEEEEEETT
T ss_pred HHHHhCCCcEEEEEeCH
Confidence 5566775 699999994
No 122
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=22.85 E-value=88 Score=25.62 Aligned_cols=49 Identities=16% Similarity=0.043 Sum_probs=29.6
Q ss_pred CHHHHHhcCCCEEEec-ccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 78 SPAMLVDVGIDWVILG-HSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 78 S~~mLkd~G~~~viiG-HSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
.+..+.+.|++++.++ |--|....+-.+-..-..++.+... ||+..|--
T Consensus 238 ~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~---pVia~GGI 287 (380)
T 1p4c_A 238 DADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGK---PVLIDSGF 287 (380)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCS---CEEECSSC
T ss_pred HHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCC---eEEEECCC
Confidence 3778889999999884 5544333333443344455555533 78777753
No 123
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=22.85 E-value=81 Score=25.22 Aligned_cols=51 Identities=12% Similarity=0.020 Sum_probs=33.8
Q ss_pred hhhHHHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEeccccccccc
Q psy7461 44 AIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVF 101 (149)
Q Consensus 44 ~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~ 101 (149)
...+..+.+.+..++++- +.+.+. |..+.+.|+++|++.++.|.+--|...
T Consensus 196 ~~~~~~i~~~~~~~~P~i---~~~~~~----~~~~~~eL~~lGv~~v~~~~~~~raa~ 246 (295)
T 1s2w_A 196 PSDIEAFMKAWNNQGPVV---IVPTKY----YKTPTDHFRDMGVSMVIWANHNLRASV 246 (295)
T ss_dssp SHHHHHHHHHHTTCSCEE---ECCSTT----TTSCHHHHHHHTCCEEEECSHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCEE---EeCCCC----CCCCHHHHHHcCCcEEEEChHHHHHHH
Confidence 445666666654334442 222222 456799999999999999999887654
No 124
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=22.65 E-value=45 Score=24.44 Aligned_cols=17 Identities=35% Similarity=0.731 Sum_probs=12.6
Q ss_pred HHHHhcCC-CEEEecccc
Q psy7461 80 AMLVDVGI-DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~-~~viiGHSE 96 (149)
+.|..+|. +.+|+|||-
T Consensus 74 ~~l~~l~~~~~~lvGhS~ 91 (268)
T 3v48_A 74 QALVAAGIEHYAVVGHAL 91 (268)
T ss_dssp HHHHHTTCCSEEEEEETH
T ss_pred HHHHHcCCCCeEEEEecH
Confidence 34566776 689999995
No 125
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=22.62 E-value=42 Score=24.47 Aligned_cols=17 Identities=12% Similarity=0.055 Sum_probs=11.8
Q ss_pred HHHHhcCCC---EEEecccc
Q psy7461 80 AMLVDVGID---WVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~~---~viiGHSE 96 (149)
+.|..+|.+ .+|+|||-
T Consensus 74 ~~l~~l~~~~~p~~lvGhSm 93 (264)
T 1r3d_A 74 QTVQAHVTSEVPVILVGYSL 93 (264)
T ss_dssp HHHHTTCCTTSEEEEEEETH
T ss_pred HHHHHhCcCCCceEEEEECH
Confidence 334556664 89999994
No 126
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=22.59 E-value=45 Score=24.37 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=12.4
Q ss_pred HHHHhcCC-CEEEecccc
Q psy7461 80 AMLVDVGI-DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~-~~viiGHSE 96 (149)
+.+..+|. +.+|+|||-
T Consensus 82 ~~l~~l~~~~~~lvGhS~ 99 (271)
T 1wom_A 82 DVCEALDLKETVFVGHSV 99 (271)
T ss_dssp HHHHHTTCSCEEEEEETH
T ss_pred HHHHHcCCCCeEEEEeCH
Confidence 34555675 689999995
No 127
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=22.40 E-value=62 Score=26.18 Aligned_cols=78 Identities=13% Similarity=0.024 Sum_probs=48.5
Q ss_pred CeEEEEecchhhH---HHHhhhCCCCeeeeecccccCCCCCcccccCHHHHHhcCCCEEEecccccccccCCChHHHHHH
Q psy7461 35 KVEVVVGVPAIYL---EYAKCLLPSNVAPAAQNCYKVPKGAFTGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEK 111 (149)
Q Consensus 35 ~~~v~i~P~~~~L---~~~~~~~~~~i~igAQnv~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~K 111 (149)
+.+.++.|..... ..+.+.+. +.++-+ |+- . |.-|..+|++.|+++|++.|+.|.+--|..+. .+.+-
T Consensus 183 GAD~ifi~g~~~~~ei~~~~~~~~-~~Pl~~-n~~--~-~g~~p~~~~~eL~~lGv~~v~~~~~~~raa~~----A~~~~ 253 (302)
T 3fa4_A 183 GADVGFLEGITSREMARQVIQDLA-GWPLLL-NMV--E-HGATPSISAAEAKEMGFRIIIFPFAALGPAVA----AMREA 253 (302)
T ss_dssp TCSEEEETTCCCHHHHHHHHHHTT-TSCEEE-ECC--T-TSSSCCCCHHHHHHHTCSEEEETTTTHHHHHH----HHHHH
T ss_pred CCCEEeecCCCCHHHHHHHHHHhc-CCceeE-EEe--c-CCCCCCCCHHHHHHcCCCEEEEchHHHHHHHH----HHHHH
Confidence 4566666644443 34444432 122211 322 2 33456789999999999999999999887653 55555
Q ss_pred HHHHHHCCCe
Q psy7461 112 VAHALETGLN 121 (149)
Q Consensus 112 v~~al~~gl~ 121 (149)
....++.|-.
T Consensus 254 ~~~i~~~g~~ 263 (302)
T 3fa4_A 254 MEKLKRDGIP 263 (302)
T ss_dssp HHHHHHHSSC
T ss_pred HHHHHHcCCC
Confidence 6666777754
No 128
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=21.98 E-value=44 Score=24.56 Aligned_cols=17 Identities=24% Similarity=0.391 Sum_probs=12.8
Q ss_pred HHHHhcCC-CEEEecccc
Q psy7461 80 AMLVDVGI-DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~-~~viiGHSE 96 (149)
+.+..+|. +.+|+|||-
T Consensus 99 ~~l~~l~~~~~~lvGhS~ 116 (289)
T 1u2e_A 99 SVVDQLDIAKIHLLGNSM 116 (289)
T ss_dssp HHHHHTTCCCEEEEEETH
T ss_pred HHHHHhCCCceEEEEECH
Confidence 45566776 799999995
No 129
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=21.90 E-value=81 Score=23.98 Aligned_cols=41 Identities=17% Similarity=0.144 Sum_probs=31.4
Q ss_pred HHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeC
Q psy7461 79 PAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 79 ~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiG 127 (149)
.+++.++|++++.+ |.|-- +.+.+-++.+.+.|+.+.+-+-
T Consensus 80 i~~~~~aGad~itv-H~Ea~-------~~~~~~i~~i~~~G~k~gval~ 120 (228)
T 3ovp_A 80 VKPMAVAGANQYTF-HLEAT-------ENPGALIKDIRENGMKVGLAIK 120 (228)
T ss_dssp HHHHHHHTCSEEEE-EGGGC-------SCHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHcCCCEEEE-ccCCc-------hhHHHHHHHHHHcCCCEEEEEc
Confidence 67899999999999 66542 2344557888899999888874
No 130
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=21.90 E-value=1.7e+02 Score=22.36 Aligned_cols=44 Identities=23% Similarity=0.061 Sum_probs=30.5
Q ss_pred ccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeC
Q psy7461 76 ELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 76 eiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiG 127 (149)
+--++.+++.|++++++. .-..+.+..-++.+.++|+.+|.=+.
T Consensus 112 ~~f~~~~~~aG~dgvii~--------dl~~ee~~~~~~~~~~~gl~~i~l~~ 155 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVP--------DLPPEEAEELKAVMKKYVLSFVPLGA 155 (262)
T ss_dssp HHHHHHHHHTTCCEEECT--------TCCHHHHHHHHHHHHHTTCEECCEEC
T ss_pred HHHHHHHHHcCCCEEEEC--------CCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 344577899999999995 12235566667888889988655343
No 131
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=21.86 E-value=48 Score=24.56 Aligned_cols=17 Identities=29% Similarity=0.319 Sum_probs=12.8
Q ss_pred HHHHhcCC-CEEEecccc
Q psy7461 80 AMLVDVGI-DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~-~~viiGHSE 96 (149)
+.|..+|. +.+|+|||-
T Consensus 86 ~~l~~l~~~~~~lvGhS~ 103 (298)
T 1q0r_A 86 AVLDGWGVDRAHVVGLSM 103 (298)
T ss_dssp HHHHHTTCSSEEEEEETH
T ss_pred HHHHHhCCCceEEEEeCc
Confidence 44566775 799999995
No 132
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=21.79 E-value=51 Score=26.80 Aligned_cols=39 Identities=18% Similarity=0.222 Sum_probs=28.6
Q ss_pred EEecccccccccCCChHHHHHHHHHHHHCCCeEEEEeCCCH
Q psy7461 90 VILGHSERRNVFGEPDSLIAEKVAHALETGLNVVACIGEKL 130 (149)
Q Consensus 90 viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCiGE~~ 130 (149)
+++|-| |-..| ++.+...+=++.+.++|+.-+++||-+-
T Consensus 66 t~LGss-R~~~~-~~~~~~~~~~~~l~~~~Id~LvvIGGdg 104 (319)
T 1zxx_A 66 TFLYSA-RYPEF-AEEEGQLAGIEQLKKHGIDAVVVIGGDG 104 (319)
T ss_dssp CTTCCC-CCGGG-TSHHHHHHHHHHHHHTTCCEEEEEECHH
T ss_pred cccccC-CCCcc-CCHHHHHHHHHHHHHhCCCEEEEECCch
Confidence 567777 55556 4556666666778899999999999653
No 133
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=21.76 E-value=1.2e+02 Score=21.56 Aligned_cols=62 Identities=10% Similarity=0.071 Sum_probs=40.5
Q ss_pred ccCHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHC-CCeEEEEeCCCHHHHhcCChHHHHHH
Q psy7461 76 ELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALET-GLNVVACIGEKLEEREAGQTEAVVYK 144 (149)
Q Consensus 76 eiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~-gl~pIlCiGE~~e~r~~g~~~~v~~~ 144 (149)
..-+++|++.|++.+- .....++-+.|.+.++.+++. +...|++.|=+--. ....|.+++.+
T Consensus 24 ~~l~~~l~~~G~~v~~------~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g-~~D~t~ea~~~ 86 (164)
T 2is8_A 24 LAIREVLAGGPFEVAA------YELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLA-PRDRTPEATRE 86 (164)
T ss_dssp HHHHHHHTTSSEEEEE------EEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS-TTCCHHHHHHT
T ss_pred HHHHHHHHHCCCeEeE------EEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC-CCCChHHHHHH
Confidence 3457788888875543 334566678899999999985 67778888765322 22356665543
No 134
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=21.75 E-value=37 Score=24.72 Aligned_cols=17 Identities=41% Similarity=0.646 Sum_probs=12.5
Q ss_pred HHHHhcCC-CEEEecccc
Q psy7461 80 AMLVDVGI-DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~-~~viiGHSE 96 (149)
..|..+|. +.+|+|||-
T Consensus 81 ~~l~~l~~~~~~lvGhS~ 98 (276)
T 1zoi_A 81 AVVAHLGIQGAVHVGHST 98 (276)
T ss_dssp HHHHHHTCTTCEEEEETH
T ss_pred HHHHHhCCCceEEEEECc
Confidence 34566776 689999994
No 135
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=21.64 E-value=48 Score=24.46 Aligned_cols=16 Identities=25% Similarity=0.690 Sum_probs=12.0
Q ss_pred HHHhcCC-CEEEecccc
Q psy7461 81 MLVDVGI-DWVILGHSE 96 (149)
Q Consensus 81 mLkd~G~-~~viiGHSE 96 (149)
.+..+|. +.+|+|||-
T Consensus 95 l~~~l~~~~~~lvGhSm 111 (313)
T 1azw_A 95 LRTHLGVDRWQVFGGSW 111 (313)
T ss_dssp HHHHTTCSSEEEEEETH
T ss_pred HHHHhCCCceEEEEECH
Confidence 4556776 689999995
No 136
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=21.57 E-value=1.3e+02 Score=24.97 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=37.8
Q ss_pred CHHHHHhcCCCEEEec----cccccccc--CCChHHHHHHHHHHHHCCCe-----EEEEe-CCCHHHHh
Q psy7461 78 SPAMLVDVGIDWVILG----HSERRNVF--GEPDSLIAEKVAHALETGLN-----VVACI-GEKLEERE 134 (149)
Q Consensus 78 S~~mLkd~G~~~viiG----HSERR~~~--~Etd~~i~~Kv~~al~~gl~-----pIlCi-GE~~e~r~ 134 (149)
-.+.|+++|++.+-+| +.+-.+.. +-+-+.+.+-++.+.+.|+. .|+-. ||+.++..
T Consensus 155 ~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget~e~~~ 223 (457)
T 1olt_A 155 VLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFA 223 (457)
T ss_dssp HHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCCHHHHH
T ss_pred HHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCCHHHHH
Confidence 3578889999999888 33322111 23667888888999999886 23333 78776654
No 137
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=21.54 E-value=49 Score=24.23 Aligned_cols=16 Identities=31% Similarity=0.476 Sum_probs=12.0
Q ss_pred HHHhcC--CCEEEecccc
Q psy7461 81 MLVDVG--IDWVILGHSE 96 (149)
Q Consensus 81 mLkd~G--~~~viiGHSE 96 (149)
.|..+| -+.+|+|||-
T Consensus 71 ~l~~l~~~~~~~lvGhSm 88 (264)
T 2wfl_A 71 VMASIPPDEKVVLLGHSF 88 (264)
T ss_dssp HHHHSCTTCCEEEEEETT
T ss_pred HHHHhCCCCCeEEEEeCh
Confidence 455665 4899999985
No 138
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=21.00 E-value=1.9e+02 Score=22.50 Aligned_cols=64 Identities=19% Similarity=0.287 Sum_probs=36.0
Q ss_pred CeEEEEecchhhHHHHhhhCCCCeeeeecccccCCCCCcccc----cCHHHHHhcCCCEEEecccccccccCCCh
Q psy7461 35 KVEVVVGVPAIYLEYAKCLLPSNVAPAAQNCYKVPKGAFTGE----LSPAMLVDVGIDWVILGHSERRNVFGEPD 105 (149)
Q Consensus 35 ~~~v~i~P~~~~L~~~~~~~~~~i~igAQnv~~~~~Ga~TGe----iS~~mLkd~G~~~viiGHSERR~~~~Etd 105 (149)
+++=+||+|. .+..+.+.+..++.+-.--+-+ .|+-.|+ .+|....+.|+++.++| |-.|+-.|
T Consensus 175 G~~GvV~sa~-e~~~iR~~~g~~fl~VtPGIr~--qg~~~~dQ~Rv~t~~~a~~aGad~iVvG----r~I~~a~d 242 (255)
T 3ldv_A 175 GLDGVVCSAQ-EASLLKQHLGREFKLVTPGIRP--AGSEQGDQRRIMTPAQAIASGSDYLVIG----RPITQAAH 242 (255)
T ss_dssp TCSEEECCHH-HHHHHHHHHCTTSEEEEECCCC--TTSTTSSCSSSCCHHHHHHTTCSEEEEC----HHHHTCSC
T ss_pred CCCEEEECHH-HHHHHHHhcCCCcEEEeCCccc--CcCCccceeccCCHHHHHHcCCCEEEEC----HHHhCCCC
Confidence 3455677764 4555655554444322222221 2222333 46888999999999999 44555444
No 139
>3fj0_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase; HET: BGC; 1.15A {Uncultured bacterium} PDB: 3cmj_A 3fiz_A* 3fiy_A*
Probab=20.95 E-value=1.7e+02 Score=24.93 Aligned_cols=48 Identities=8% Similarity=0.016 Sum_probs=37.3
Q ss_pred HHHHhcCCCEEEecccccccccC-C---Ch---HHHHHHHHHHHHCCCeEEEEeC
Q psy7461 80 AMLVDVGIDWVILGHSERRNVFG-E---PD---SLIAEKVAHALETGLNVVACIG 127 (149)
Q Consensus 80 ~mLkd~G~~~viiGHSERR~~~~-E---td---~~i~~Kv~~al~~gl~pIlCiG 127 (149)
++|+++|++.+=.+=|=.|..-. + +. +-.++=+..++++||.|++++-
T Consensus 86 ~lm~~lG~~~~R~sisW~Ri~P~G~g~~n~~Gl~~y~~lid~l~~~GI~pivtL~ 140 (465)
T 3fj0_A 86 DLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLY 140 (465)
T ss_dssp HHHHHHTCSEEEEECCHHHHCCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHcCCCEEEccCCHHHeeeCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 68999999999888887775432 2 22 3456668999999999999973
No 140
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=20.94 E-value=1.1e+02 Score=22.93 Aligned_cols=39 Identities=13% Similarity=-0.016 Sum_probs=25.7
Q ss_pred ccccCHHHHHhcCCCEEEecccccccccCCChHHHHHHH
Q psy7461 74 TGELSPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKV 112 (149)
Q Consensus 74 TGeiS~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv 112 (149)
+.+=.++++++++++.++..|-..=..+.++-+.+.+.+
T Consensus 206 ~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~ 244 (264)
T 3rpc_A 206 GTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFI 244 (264)
T ss_dssp CHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHHHHHH
T ss_pred CHHHHHHHHHhCCcCeEEEEccccccccccCHHHHHHHH
Confidence 334555678888888888888775445666666654333
No 141
>3pa8_A Toxin B; CLAN CD cysteine protease, protease, toxin-peptide in complex; HET: 621 IHP; 2.00A {Clostridium difficile} PDB: 3pee_B*
Probab=20.91 E-value=50 Score=26.30 Aligned_cols=58 Identities=12% Similarity=0.246 Sum_probs=38.4
Q ss_pred CHHHHH-hcCCCEEEeccccc----ccccCCChHHHHHHHHHHH---HCCCeE----EEEeCCCHHHHhc
Q psy7461 78 SPAMLV-DVGIDWVILGHSER----RNVFGEPDSLIAEKVAHAL---ETGLNV----VACIGEKLEEREA 135 (149)
Q Consensus 78 S~~mLk-d~G~~~viiGHSER----R~~~~Etd~~i~~Kv~~al---~~gl~p----IlCiGE~~e~r~~ 135 (149)
.|..|. .-.++|.+|||.+. .++-+-+.+.++.+++... .....| |.=+|=++-....
T Consensus 93 ~P~~L~~~gkiRwqlVGHGr~e~n~~~fag~sadeLa~~L~~f~~~~~~~~~pK~i~IsLvGCsL~s~~~ 162 (254)
T 3pa8_A 93 IPSIISDRPKIKLTFIGHGKDEFNTDIFAGFDVDSLSTEIEAAIDLAKEDISPKSIEINLLGCNMFSYSI 162 (254)
T ss_dssp CCTTTTTCSEEEEEEECCCCSSCCSSEETTEEHHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCCCTTS
T ss_pred CHhHhccCCceEEEEEecCcCCCCcceeccCCHHHHHHHHHHHHHHHhhccCCCCceEEEEeecccCCCc
Confidence 467775 44589999999886 4444667788887765543 334333 6778877765554
No 142
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=20.89 E-value=47 Score=24.80 Aligned_cols=16 Identities=13% Similarity=0.418 Sum_probs=12.0
Q ss_pred HHHhcCC-CEEEecccc
Q psy7461 81 MLVDVGI-DWVILGHSE 96 (149)
Q Consensus 81 mLkd~G~-~~viiGHSE 96 (149)
.|..+|. +.+|+|||-
T Consensus 99 ~l~~l~~~~~~lvGhS~ 115 (291)
T 2wue_A 99 LFDQLGLGRVPLVGNAL 115 (291)
T ss_dssp HHHHHTCCSEEEEEETH
T ss_pred HHHHhCCCCeEEEEECh
Confidence 4556676 699999984
No 143
>3ho6_A Toxin A; inositol phosphate, enterotoxin; HET: IHP; 1.60A {Clostridium difficile}
Probab=20.79 E-value=79 Score=25.36 Aligned_cols=57 Identities=12% Similarity=0.223 Sum_probs=38.4
Q ss_pred HHHHHh-cCCCEEEeccccc----ccccCCChHHHHHHHHHHHH---CCCe--EE--EEeCCCHHHHhc
Q psy7461 79 PAMLVD-VGIDWVILGHSER----RNVFGEPDSLIAEKVAHALE---TGLN--VV--ACIGEKLEEREA 135 (149)
Q Consensus 79 ~~mLkd-~G~~~viiGHSER----R~~~~Etd~~i~~Kv~~al~---~gl~--pI--lCiGE~~e~r~~ 135 (149)
|..|++ -.++|.+|||.+- +++-+-+.+.++.++...++ ...+ -| .=+|=++-..+.
T Consensus 97 p~~L~~~gklRWqlVGHGr~e~n~~tlaG~sa~~LA~~L~~f~~~~~~~~~P~~I~~sLvGCsL~s~~~ 165 (267)
T 3ho6_A 97 PERLKNKEKVKVTFIGHGKDEFNTSEFARLSVDSLSNEISSFLDTIKLDISPKNVEVNLLGCNMFSYDF 165 (267)
T ss_dssp CGGGTTCSEEEEEEECCCCSSCCSSCBTTBCHHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCCCTTS
T ss_pred HHHhccCCceEEEEEeCCCCCCCccccCCCCHHHHHHHHHHHHHHhhccCCCCcceeeeEeeecCCCCc
Confidence 457753 5589999999987 55667888888887766542 2222 35 667766655444
No 144
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=20.61 E-value=98 Score=22.36 Aligned_cols=22 Identities=14% Similarity=0.176 Sum_probs=19.6
Q ss_pred CChHHHHHHHHHHHHCCCeEEE
Q psy7461 103 EPDSLIAEKVAHALETGLNVVA 124 (149)
Q Consensus 103 Etd~~i~~Kv~~al~~gl~pIl 124 (149)
=||+.|.+.|..+++.|..|-+
T Consensus 14 ltd~qI~kQI~YlL~qGw~~~i 35 (138)
T 4f0h_B 14 LTDEQIKKQIDYMISKKLAIGI 35 (138)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHhCCCEEEE
Confidence 4899999999999999998754
No 145
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=20.57 E-value=46 Score=24.80 Aligned_cols=17 Identities=18% Similarity=0.311 Sum_probs=12.9
Q ss_pred HHHHhcCC--CEEEecccc
Q psy7461 80 AMLVDVGI--DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~--~~viiGHSE 96 (149)
+.|+.+|. +.+|+|||-
T Consensus 97 ~~l~~l~~~~~~~lvGhS~ 115 (296)
T 1j1i_A 97 DFIKAMNFDGKVSIVGNSM 115 (296)
T ss_dssp HHHHHSCCSSCEEEEEEHH
T ss_pred HHHHhcCCCCCeEEEEECh
Confidence 34566776 799999995
No 146
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A
Probab=20.43 E-value=1.5e+02 Score=25.20 Aligned_cols=47 Identities=15% Similarity=0.156 Sum_probs=36.1
Q ss_pred HHHHhcCCCEEEecccccccccC---CCh----HHHHHHHHHHHHCCCeEEEEe
Q psy7461 80 AMLVDVGIDWVILGHSERRNVFG---EPD----SLIAEKVAHALETGLNVVACI 126 (149)
Q Consensus 80 ~mLkd~G~~~viiGHSERR~~~~---Etd----~~i~~Kv~~al~~gl~pIlCi 126 (149)
++|+++|++..=.+=|=.|..-. +-| +-.++=+..++++||.|++++
T Consensus 78 ~lm~~lG~~~yRfsIsWsRI~P~g~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL 131 (479)
T 1gnx_A 78 ALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATL 131 (479)
T ss_dssp HHHHHTTCSEEEEECCHHHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHcCCCEEEecccHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 69999999999888887775432 222 233556899999999999998
No 147
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=20.42 E-value=2.8e+02 Score=20.86 Aligned_cols=41 Identities=20% Similarity=0.151 Sum_probs=25.8
Q ss_pred CHHHHHhcCCCEEEecccccccccCCChHHHHHHHHHHHHCCCe
Q psy7461 78 SPAMLVDVGIDWVILGHSERRNVFGEPDSLIAEKVAHALETGLN 121 (149)
Q Consensus 78 S~~mLkd~G~~~viiGHSERR~~~~Etd~~i~~Kv~~al~~gl~ 121 (149)
+|+.....|++|.+||=+ .+-.++-....++++..++..+.
T Consensus 172 tp~~a~~~Gad~iVVGR~---I~~A~dP~~aa~~i~~~i~~~~~ 212 (222)
T 4dbe_A 172 SYGDAVCAGADYEIIGRS---IYNAGNPLTALRTINKIIEDKVM 212 (222)
T ss_dssp CTTHHHHHTCSEEEECHH---HHTSSSHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHcCCCEEEECHH---hcCCCCHHHHHHHHHHHHHHHHH
Confidence 576777899999999933 23344545555566555544433
No 148
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=20.38 E-value=54 Score=23.92 Aligned_cols=17 Identities=18% Similarity=0.124 Sum_probs=12.5
Q ss_pred HHHHhcCC-CEEEecccc
Q psy7461 80 AMLVDVGI-DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~-~~viiGHSE 96 (149)
+.|..+|. +.+|+|||-
T Consensus 84 ~~l~~l~~~~~~lvGhS~ 101 (266)
T 2xua_A 84 GLMDTLKIARANFCGLSM 101 (266)
T ss_dssp HHHHHTTCCSEEEEEETH
T ss_pred HHHHhcCCCceEEEEECH
Confidence 44556675 699999994
No 149
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=20.34 E-value=59 Score=27.05 Aligned_cols=26 Identities=15% Similarity=0.224 Sum_probs=21.2
Q ss_pred CChHHHHHHHHHHHHCCCeEEEEeCCC
Q psy7461 103 EPDSLIAEKVAHALETGLNVVACIGEK 129 (149)
Q Consensus 103 Etd~~i~~Kv~~al~~gl~pIlCiGE~ 129 (149)
|..+....++..+.+.|=. |+|||-|
T Consensus 234 ~V~~~ta~~in~aka~G~R-ViAVGTT 259 (346)
T 1yy3_A 234 QMSEETAAALNKVRENGGR-IISVGTT 259 (346)
T ss_dssp EECHHHHHHHHHHHHTTCC-EEEECTT
T ss_pred EECHHHHHHHHHHHHcCCe-EEEEecc
Confidence 4556777889999999865 8999987
No 150
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=20.30 E-value=56 Score=23.02 Aligned_cols=21 Identities=10% Similarity=0.050 Sum_probs=17.2
Q ss_pred HHHHhcCCCEEEecccccccc
Q psy7461 80 AMLVDVGIDWVILGHSERRNV 100 (149)
Q Consensus 80 ~mLkd~G~~~viiGHSERR~~ 100 (149)
+.+++.++++++.||+=+...
T Consensus 99 ~~~~~~~~d~vi~GHtH~~~~ 119 (176)
T 3ck2_A 99 YWAQEEEAAICLYGHLHVPSA 119 (176)
T ss_dssp HHHHHTTCSEEECCSSCCEEE
T ss_pred HHHHhcCCCEEEECCcCCCCc
Confidence 456789999999999987654
No 151
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=20.28 E-value=49 Score=24.69 Aligned_cols=17 Identities=24% Similarity=0.581 Sum_probs=12.4
Q ss_pred HHHHhcCC-CEEEecccc
Q psy7461 80 AMLVDVGI-DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~-~~viiGHSE 96 (149)
+.|..+|+ +.+|+|||-
T Consensus 85 ~ll~~l~~~~~~lvGhSm 102 (276)
T 2wj6_A 85 EILDQLGVETFLPVSHSH 102 (276)
T ss_dssp HHHHHHTCCSEEEEEEGG
T ss_pred HHHHHhCCCceEEEEECH
Confidence 44566776 589999985
No 152
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=20.17 E-value=54 Score=24.23 Aligned_cols=16 Identities=25% Similarity=0.638 Sum_probs=11.7
Q ss_pred HHHhcCC-CEEEecccc
Q psy7461 81 MLVDVGI-DWVILGHSE 96 (149)
Q Consensus 81 mLkd~G~-~~viiGHSE 96 (149)
.+..+|. +.+|+|||-
T Consensus 98 l~~~l~~~~~~lvGhS~ 114 (317)
T 1wm1_A 98 LREMAGVEQWLVFGGSW 114 (317)
T ss_dssp HHHHTTCSSEEEEEETH
T ss_pred HHHHcCCCcEEEEEeCH
Confidence 3455676 689999995
No 153
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=20.04 E-value=42 Score=25.58 Aligned_cols=17 Identities=18% Similarity=0.313 Sum_probs=12.9
Q ss_pred HHHHhcCC--CEEEecccc
Q psy7461 80 AMLVDVGI--DWVILGHSE 96 (149)
Q Consensus 80 ~mLkd~G~--~~viiGHSE 96 (149)
+.|..+|. +.+|+|||-
T Consensus 102 ~ll~~l~~~~~~~lvGhSm 120 (318)
T 2psd_A 102 AWFELLNLPKKIIFVGHDW 120 (318)
T ss_dssp HHHTTSCCCSSEEEEEEEH
T ss_pred HHHHhcCCCCCeEEEEECh
Confidence 45566775 799999984
No 154
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=20.04 E-value=58 Score=24.86 Aligned_cols=38 Identities=18% Similarity=0.122 Sum_probs=22.3
Q ss_pred HhcCC-CEEEecccccccccCCChHHHHHHHHHHHHC-------CCeEEEEeCCCH
Q psy7461 83 VDVGI-DWVILGHSERRNVFGEPDSLIAEKVAHALET-------GLNVVACIGEKL 130 (149)
Q Consensus 83 kd~G~-~~viiGHSERR~~~~Etd~~i~~Kv~~al~~-------gl~pIlCiGE~~ 130 (149)
+..|+ +..|||||-==. +.. ..+++. .+.-++++|-+.
T Consensus 92 ~~~~~~~~~lvGHSmGG~--------ia~--~~~~~~~~~~~~~~v~~lv~i~~p~ 137 (249)
T 3fle_A 92 SQFGIQQFNFVGHSMGNM--------SFA--FYMKNYGDDRHLPQLKKEVNIAGVY 137 (249)
T ss_dssp HTTCCCEEEEEEETHHHH--------HHH--HHHHHHSSCSSSCEEEEEEEESCCT
T ss_pred HHhCCCceEEEEECccHH--------HHH--HHHHHCcccccccccceEEEeCCcc
Confidence 34475 478999997532 222 223332 367888998543
Done!