RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7463
         (319 letters)



>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 53

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIHER-IAYQCNVCDKKYSRLSDYKIHMNMH 202
           Y C  C K F+      RH+++H     Y C VC KK+        HM +H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53



 Score = 33.1 bits (75), Expect = 0.003
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNG-FKYQCHICLKCTSRKNYLKRH 225
           Y C  C K ++  S    HM+MH G   Y C +C K    K++L  H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 49



 Score = 32.0 bits (72), Expect = 0.009
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH 175
           C  +F  +S   RH  +        Y C  C K+F +  +L  H+ IH
Sbjct: 8   CGKSFTHKSQRDRH--MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53



 Score = 25.4 bits (55), Expect = 1.8
 Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 14 PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLH 65
             C  C + +    +   HM      + Y C  C + F  +     H+++H
Sbjct: 3  LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53


>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 33

 Score = 32.6 bits (75), Expect = 0.003
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH 175
           H G+K  Y C  C K FS    L +H  +H
Sbjct: 2   HSGEK-PYGCVECGKAFSRSSILVQHQRVH 30



 Score = 31.1 bits (71), Expect = 0.010
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNG 204
           Y C  C K +SR S    H  +H G
Sbjct: 8   YGCVECGKAFSRSSILVQHQRVHTG 32



 Score = 28.0 bits (63), Expect = 0.14
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)

Query: 201 MHNGFK-YQCHICLKCTSRKNYLKRHIIMMHT 231
           +H+G K Y C  C K  SR + L +H   +HT
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQH-QRVHT 31


>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 36

 Score = 31.9 bits (73), Expect = 0.005
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 202 HNGFK-YQCHICLKCTSRKNYLKRHIIMMHTK 232
           H+G K Y+C+IC    ++   +K HI+  HT+
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34



 Score = 30.0 bits (68), Expect = 0.028
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH 175
           H G+K  Y C  C  RF+    +K H+   
Sbjct: 3   HSGEKP-YECYICHARFTQSGTMKMHILQK 31



 Score = 26.9 bits (60), Expect = 0.34
 Identities = 5/25 (20%), Positives = 14/25 (56%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNG 204
           Y+C +C  ++++    K+H+   + 
Sbjct: 9   YECYICHARFTQSGTMKMHILQKHT 33


>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
           Saccharomyces cerevisiae sequence}
          Length = 29

 Score = 31.8 bits (73), Expect = 0.005
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNGFK 206
           + C VC + ++R    K H   H   K
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEK 29



 Score = 30.3 bits (69), Expect = 0.017
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIH 175
           + C+ C + F+  ++LKRH   H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSH 25



 Score = 26.0 bits (58), Expect = 0.58
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 207 YQCHICLKCTSRKNYLKRHIIMMHT 231
           + C +C +  +R+ +LKRH    HT
Sbjct: 3   FVCEVCTRAFARQEHLKRH-YRSHT 26


>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 36

 Score = 32.0 bits (73), Expect = 0.006
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH 175
           H G+K  YAC  CDK F   Q L  H   +
Sbjct: 3   HTGEK-PYACSHCDKTFRQKQLLDMHFKRY 31



 Score = 31.2 bits (71), Expect = 0.010
 Identities = 6/28 (21%), Positives = 13/28 (46%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNGFKY 207
           Y C+ CDK + +     +H   ++   +
Sbjct: 9   YACSHCDKTFRQKQLLDMHFKRYHDPNF 36



 Score = 26.2 bits (58), Expect = 0.64
 Identities = 11/30 (36%), Positives = 12/30 (40%), Gaps = 1/30 (3%)

Query: 202 HNGFK-YQCHICLKCTSRKNYLKRHIIMMH 230
           H G K Y C  C K   +K  L  H    H
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32


>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 39

 Score = 31.5 bits (72), Expect = 0.009
 Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 180 YQCNVCDKKYSRLSDYKIHM-NMHNGFK-YQCHI 211
           Y C  C K +SR      H+  +H   + ++C +
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39



 Score = 30.7 bits (70), Expect = 0.016
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 207 YQCHICLKCTSRKNYLKRHIIMMHT 231
           Y C  C K  SR ++L  HI  +HT
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHT 30



 Score = 28.8 bits (65), Expect = 0.077
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 4/35 (11%)

Query: 153 YACDRCDKRFSLLQNLKRHL-AIH--ERIAYQCNV 184
           Y C  C K FS   +L  H+  +H  ER  ++C V
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSER-PHKCQV 39



 Score = 25.0 bits (55), Expect = 1.9
 Identities = 6/33 (18%), Positives = 11/33 (33%), Gaps = 1/33 (3%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACD 156
            C  C   F    ++  H    H  ++  + C 
Sbjct: 7   ICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQ 38



 Score = 25.0 bits (55), Expect = 2.0
 Identities = 7/34 (20%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 14 PQKCPLCERLYKSVYRMKEHMKKQHKGQ-LYECD 46
          P  C  C + +     +  H+K+ H  +  ++C 
Sbjct: 5  PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38


>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 29

 Score = 31.2 bits (71), Expect = 0.009
 Identities = 7/27 (25%), Positives = 11/27 (40%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNGFK 206
           + C  C K++ R      H+  H   K
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQNKK 29



 Score = 29.2 bits (66), Expect = 0.042
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIH 175
           +AC  C KRF    +L +H+  H
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTH 25



 Score = 25.4 bits (56), Expect = 0.99
 Identities = 8/25 (32%), Positives = 12/25 (48%), Gaps = 1/25 (4%)

Query: 207 YQCHICLKCTSRKNYLKRHIIMMHT 231
           + C  C K   R ++L +H I  H 
Sbjct: 3   FACPECPKRFMRSDHLSKH-IKTHQ 26


>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
           10090]}
          Length = 28

 Score = 30.7 bits (70), Expect = 0.013
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNG 204
           +QC +C + +SR      H+  H G
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTG 28



 Score = 29.9 bits (68), Expect = 0.022
 Identities = 7/23 (30%), Positives = 11/23 (47%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIH 175
           + C  C + FS   +L  H+  H
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTH 26



 Score = 25.6 bits (57), Expect = 0.93
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 207 YQCHICLKCTSRKNYLKRHIIMMHT 231
           +QC IC++  SR ++L  H I  HT
Sbjct: 4   FQCRICMRNFSRSDHLTTH-IRTHT 27


>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 35

 Score = 30.5 bits (69), Expect = 0.016
 Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH 175
             G +  + C  C   F+   N  RHL +H
Sbjct: 2   SSGKR-PFVCRICLSAFTTKANCARHLKVH 30



 Score = 25.5 bits (56), Expect = 1.3
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 202 HNGFK-YQCHICLKCTSRKNYLKRHIIMMHT 231
            +G + + C ICL   + K    RH + +HT
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARH-LKVHT 31



 Score = 24.3 bits (53), Expect = 2.5
 Identities = 4/23 (17%), Positives = 12/23 (52%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMH 202
           + C +C   ++  ++   H+ +H
Sbjct: 8   FVCRICLSAFTTKANCARHLKVH 30


>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 47

 Score = 30.7 bits (69), Expect = 0.022
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 134 PRSNMLRHYLLKHRGDKVF-YACDRCDKRFSLLQNLKRHLAIH 175
           PR ++ ++  +K   DK F      C K F    N++ H+  H
Sbjct: 3   PRGSIDKY--VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43


>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 37

 Score = 29.7 bits (67), Expect = 0.039
 Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH 175
             G K  + C  CD+ FS   +L  H   H
Sbjct: 6   STGIK-PFQCPDCDRSFSRSDHLALHRKRH 34



 Score = 27.8 bits (62), Expect = 0.18
 Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 198 HMNMHNGFK-YQCHICLKCTSRKNYLKRHI 226
                 G K +QC  C +  SR ++L  H 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHR 31



 Score = 25.8 bits (57), Expect = 0.74
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMH 202
           +QC  CD+ +SR     +H   H
Sbjct: 12  FQCPDCDRSFSRSDHLALHRKRH 34


>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3
          {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 121

 Score = 31.4 bits (71), Expect = 0.048
 Identities = 8/40 (20%), Positives = 14/40 (35%)

Query: 5  ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYE 44
            +         C  C+RL+ S      H K +H+  +  
Sbjct: 6  SGEPAHGRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45


>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 36

 Score = 28.1 bits (63), Expect = 0.12
 Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 3/34 (8%)

Query: 179 AYQCN--VCDKKYSRLSDYKIHMNMHNGFK-YQC 209
           ++ C    C K ++     K HM +H+  + Y C
Sbjct: 1   SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34



 Score = 24.3 bits (53), Expect = 2.8
 Identities = 8/25 (32%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 153 YACD--RCDKRFSLLQNLKRHLAIH 175
           ++C    C K F+  ++LK H+ +H
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLH 26


>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 32

 Score = 28.1 bits (63), Expect = 0.13
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 153 YACD--RCDKRFSLLQNLKRHLAIHER 177
           Y+CD   CDK F    +L RH   H+ 
Sbjct: 4   YSCDHPGCDKAFVRNHDLIRHKKSHQE 30



 Score = 25.4 bits (56), Expect = 1.2
 Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 2/27 (7%)

Query: 180 YQCNV--CDKKYSRLSDYKIHMNMHNG 204
           Y C+   CDK + R  D   H   H  
Sbjct: 4   YSCDHPGCDKAFVRNHDLIRHKKSHQE 30


>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
           Saccharomyces cerevisiae sequence}
          Length = 31

 Score = 27.9 bits (62), Expect = 0.16
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 207 YQCHICLKCTSRKNYLKRHIIMMH 230
           Y C +C +  +R++ L RH   +H
Sbjct: 2   YPCGLCNRAFTRRDLLIRHAQKIH 25


>d1ihma_ b.121.4.3 (A:) Calicivirus capsid protein {Norwalk virus
           [TaxId: 11983]}
          Length = 492

 Score = 31.0 bits (70), Expect = 0.19
 Identities = 9/28 (32%), Positives = 11/28 (39%), Gaps = 6/28 (21%)

Query: 281 SKHTHPLVCPSSNGREETQYFPFRSWVN 308
              + P   P  NG      F F SWV+
Sbjct: 459 GASSGPQQLPI-NG-----VFVFVSWVS 480


>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 31

 Score = 27.3 bits (61), Expect = 0.22
 Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 180 YQCNV--CDKKYSRLSDYKIHMNMHNGFK 206
           + C    C K+++R  + + H   H G K
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31



 Score = 26.5 bits (59), Expect = 0.38
 Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 2/25 (8%)

Query: 153 YACDR--CDKRFSLLQNLKRHLAIH 175
           + C    C KRF+    L+RH   H
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTH 27


>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 75

 Score = 28.5 bits (63), Expect = 0.23
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 179 AYQCNVCDKKYSRLSDYKIHMNMHN 203
            YQC  CD K    ++   H+N+HN
Sbjct: 18  TYQCKHCDSKLQSTAELTSHLNIHN 42



 Score = 24.3 bits (52), Expect = 7.7
 Identities = 10/29 (34%), Positives = 11/29 (37%)

Query: 147 RGDKVFYACDRCDKRFSLLQNLKRHLAIH 175
           R     Y C  CD +      L  HL IH
Sbjct: 13  RLQNSTYQCKHCDSKLQSTAELTSHLNIH 41


>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
           10090]}
          Length = 28

 Score = 27.1 bits (60), Expect = 0.27
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIHER 177
           +ACD C ++F+     KRH  IH R
Sbjct: 4   FACDICGRKFARSDERKRHTKIHLR 28



 Score = 25.6 bits (56), Expect = 1.0
 Identities = 7/24 (29%), Positives = 15/24 (62%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHN 203
           + C++C +K++R  + K H  +H 
Sbjct: 4   FACDICGRKFARSDERKRHTKIHL 27


>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
           protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 38

 Score = 27.0 bits (60), Expect = 0.30
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH 175
            R  +  Y CD C K FS   +L +H   H
Sbjct: 7   QRERR-RYKCDECGKSFSHSSDLSKHRRTH 35



 Score = 26.3 bits (58), Expect = 0.59
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 170 RHLAIH-ERIAYQCNVCDKKYSRLSDYKIHMNMHNG 204
           R      ER  Y+C+ C K +S  SD   H   H G
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37



 Score = 26.3 bits (58), Expect = 0.62
 Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 2/35 (5%)

Query: 198 HMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHT 231
                   + Y+C  C K  S  + L +H    HT
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHT 36


>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 28

 Score = 26.9 bits (60), Expect = 0.33
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 153 YACD--RCDKRFSLLQNLKRHLAIH 175
           Y C    C+K+F+   NLK H+  H
Sbjct: 3   YVCPFDGCNKKFAQSTNLKSHILTH 27



 Score = 25.8 bits (57), Expect = 0.70
 Identities = 8/25 (32%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 180 YQCNV--CDKKYSRLSDYKIHMNMH 202
           Y C    C+KK+++ ++ K H+  H
Sbjct: 3   YVCPFDGCNKKFAQSTNLKSHILTH 27


>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 30

 Score = 26.1 bits (58), Expect = 0.51
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 180 YQCNV--CDKKYSRLSDYKIHMNMHNG 204
           ++C    C K YSRL + K H+  H G
Sbjct: 3   HKCTFEGCRKSYSRLENLKTHLRSHTG 29



 Score = 26.1 bits (58), Expect = 0.58
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 153 YACD--RCDKRFSLLQNLKRHLAIH 175
           + C    C K +S L+NLK HL  H
Sbjct: 3   HKCTFEGCRKSYSRLENLKTHLRSH 27


>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
           10090]}
          Length = 29

 Score = 26.1 bits (58), Expect = 0.55
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)

Query: 153 YACD--RCDKRFSLLQNLKRHLAIH 175
           YAC    CD+RFS   +L RH+ IH
Sbjct: 3   YACPVESCDRRFSRSADLTRHIRIH 27



 Score = 26.1 bits (58), Expect = 0.60
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 180 YQCNV--CDKKYSRLSDYKIHMNMHNG 204
           Y C V  CD+++SR +D   H+ +H G
Sbjct: 3   YACPVESCDRRFSRSADLTRHIRIHTG 29


>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 26

 Score = 26.0 bits (58), Expect = 0.64
 Identities = 10/23 (43%), Positives = 10/23 (43%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIH 175
           Y C  C K FS    L  H  IH
Sbjct: 3   YKCLECGKAFSQNSGLINHQRIH 25



 Score = 25.2 bits (56), Expect = 1.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMH 202
           Y+C  C K +S+ S    H  +H
Sbjct: 3   YKCLECGKAFSQNSGLINHQRIH 25


>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 26

 Score = 25.8 bits (56), Expect = 0.75
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNG 204
           ++C VC K +SR    K HM  H G
Sbjct: 2   HKCEVCGKCFSRKDKLKTHMRCHTG 26



 Score = 23.1 bits (49), Expect = 7.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)

Query: 207 YQCHICLKCTSRKNYLKRHI 226
           ++C +C KC SRK+ LK H+
Sbjct: 2   HKCEVCGKCFSRKDKLKTHM 21


>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
           562]}
          Length = 210

 Score = 28.4 bits (62), Expect = 1.1
 Identities = 12/127 (9%), Positives = 32/127 (25%), Gaps = 1/127 (0%)

Query: 108 QTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQN 167
              ++   L++ GI+             +  LR  LL  +        D+ +        
Sbjct: 18  ARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDEVITDKAEVLMFYAAR 77

Query: 168 LKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHII 227
           ++    + +  A                + +     G        L+     ++     +
Sbjct: 78  VQLVETVIKP-ALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTL 136

Query: 228 MMHTKFE 234
            +    E
Sbjct: 137 YLDVTPE 143


>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 53

 Score = 26.1 bits (57), Expect = 1.1
 Identities = 12/44 (27%), Positives = 17/44 (38%)

Query: 151 VFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSD 194
               C  C K F+    L++H A H   + Q    D    RL +
Sbjct: 5   GILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGE 48


>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger
           peptide) {Drosophila melanogaster [TaxId: 7227]}
          Length = 37

 Score = 25.0 bits (54), Expect = 1.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHR 147
           +C +C+  +   SN  RHY+  H+
Sbjct: 10  RCKVCSRVYTHISNFCRHYVTSHK 33


>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 67

 Score = 25.4 bits (56), Expect = 2.1
 Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 1/24 (4%)

Query: 17 CPLCERLYKSVYRMKEHMK-KQHK 39
          C  C R +     +K H + K HK
Sbjct: 18 CLACARYFIDSTNLKTHFRSKDHK 41



 Score = 23.9 bits (52), Expect = 7.4
 Identities = 9/28 (32%), Positives = 10/28 (35%), Gaps = 1/28 (3%)

Query: 36 KQHKGQLYECDCCTEYFIDRIAYEEHVR 63
              G    C  C  YFID    + H R
Sbjct: 10 LPGGGLHR-CLACARYFIDSTNLKTHFR 36


>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 30

 Score = 24.6 bits (54), Expect = 2.1
 Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 180 YQCNV--CDKKYSRLSDYKIHMNMHNG 204
           +QC    C K++S   + + H+ +H G
Sbjct: 3   FQCTFEGCGKRFSLDFNLRTHVRIHTG 29



 Score = 24.6 bits (54), Expect = 2.3
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 153 YACD--RCDKRFSLLQNLKRHLAIH 175
           + C    C KRFSL  NL+ H+ IH
Sbjct: 3   FQCTFEGCGKRFSLDFNLRTHVRIH 27


>d2hmza_ a.24.4.1 (A:) Hemerythrin {Sipunculid worm (Themiste
           dyscritum) [TaxId: 6436]}
          Length = 113

 Score = 25.3 bits (55), Expect = 5.1
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 9/87 (10%)

Query: 152 FYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQC-H 210
               D  D    L +   +H    +++              + Y  H   H+ F ++   
Sbjct: 35  LSQADNADHLNELRRCTGKHFLNEQQLMQASQ--------YAGYAEHKKAHDDFIHKLDT 86

Query: 211 ICLKCTSRKNYLKRHIIMMHTKFEGQI 237
                T  KN+L  HI  +  K+ G+I
Sbjct: 87  WDGDVTYAKNWLVNHIKTIDFKYRGKI 113


>d1sf9a_ b.34.15.1 (A:) Hypothetical protein YfhH {Bacillus subtilis
           [TaxId: 1423]}
          Length = 118

 Score = 25.1 bits (55), Expect = 5.9
 Identities = 6/26 (23%), Positives = 18/26 (69%)

Query: 176 ERIAYQCNVCDKKYSRLSDYKIHMNM 201
           E + +Q N  +K+YS+++ ++++  +
Sbjct: 6   ENLYFQSNAMEKRYSQMTPHELNTEI 31


>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
           {Xenopus laevis [TaxId: 8355]}
          Length = 29

 Score = 23.5 bits (50), Expect = 6.0
 Identities = 12/18 (66%), Positives = 13/18 (72%)

Query: 158 CDKRFSLLQNLKRHLAIH 175
           CDKRFSL   LKRH  +H
Sbjct: 11  CDKRFSLPSRLKRHEKVH 28


>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 37

 Score = 23.5 bits (50), Expect = 6.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 125 CNLCADTFCPRSNMLRH 141
           C+ C  TF  R+ M RH
Sbjct: 7   CSKCGKTFTRRNTMARH 23


>d1fvga_ d.58.28.1 (A:) Peptide methionine sulfoxide reductase {Cow
           (Bos taurus) [TaxId: 9913]}
          Length = 192

 Score = 25.9 bits (56), Expect = 6.5
 Identities = 6/80 (7%), Positives = 19/80 (23%)

Query: 177 RIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMMHTKFEGQ 236
               +     +  S     K+    H+  +         +  ++ +              
Sbjct: 88  AEVVRVVFQPEHISFEELLKVFWENHDPTQGMRQGNDHGSQYRSAIYPTSAEHVGAALKS 147

Query: 237 IGEMEDKVGEKKIGEIEAKV 256
             + +  + E   G I   +
Sbjct: 148 KEDYQKVLSEHGFGLITTDI 167


>d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId:
           29163]}
          Length = 142

 Score = 25.5 bits (55), Expect = 6.8
 Identities = 6/86 (6%), Positives = 12/86 (13%), Gaps = 5/86 (5%)

Query: 21  ERLYKSVYRMKEHMKKQHKGQLYE---CDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEK 77
             L+ +   +         G                          +           E 
Sbjct: 30  MALFDAHDDVFAKFSGLFSGAAKGTVKNTPEMAAQAQSFKGLVSNWVDNLD--NAGALEG 87

Query: 78  FEKSLMRDHLVTHIPPEHRGKVSDAF 103
             K+   +H    I            
Sbjct: 88  QCKTFAANHKARGISAGQLEAAFKVL 113


>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
           (Mus musculus) [TaxId: 10090]}
          Length = 30

 Score = 23.2 bits (49), Expect = 8.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNG 204
           + C+VC + + R  + ++HM  H G
Sbjct: 5   FTCSVCQETFRRRMELRLHMVSHTG 29


>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 37

 Score = 23.1 bits (50), Expect = 8.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIHER 177
           Y C  C + F   Q L  H+ +H R
Sbjct: 6   YTCSFCKREFRSAQALGGHMNVHRR 30


>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 32

 Score = 23.1 bits (49), Expect = 8.7
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 43 YECDCCTEYFIDRIAYEEHVRLHEGGI 69
          Y C  C   F  +     HVR H+G +
Sbjct: 4  YSCPVCGLRFKRKDRMSYHVRSHDGSV 30


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.138    0.434 

Gapped
Lambda     K      H
   0.267   0.0449    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,235,389
Number of extensions: 59645
Number of successful extensions: 458
Number of sequences better than 10.0: 1
Number of HSP's gapped: 455
Number of HSP's successfully gapped: 136
Length of query: 319
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 234
Effective length of database: 1,240,546
Effective search space: 290287764
Effective search space used: 290287764
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (24.9 bits)