Query psy7467
Match_columns 295
No_of_seqs 193 out of 874
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 19:04:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7467.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7467hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw6_A CAAX prenyl protease 1 100.0 2.1E-64 7.2E-69 500.9 23.1 251 45-295 8-335 (482)
2 3cqb_A Probable protease HTPX 99.2 5.4E-12 1.8E-16 101.4 5.7 72 192-295 11-89 (107)
3 3c37_A Peptidase, M48 family; 99.2 5.7E-12 1.9E-16 114.9 6.3 76 185-295 24-106 (253)
4 4f67_A UPF0176 protein LPG2838 51.1 5.9 0.0002 35.9 1.8 44 191-240 19-63 (265)
5 3sao_A Extracellular fatty aci 30.2 43 0.0015 26.8 3.7 32 196-227 117-148 (160)
6 1e5p_A Aphrodisin; lipocalin, 28.6 38 0.0013 26.6 3.1 31 196-226 115-145 (151)
7 1bj7_A D 2; allergen, lipocali 27.5 34 0.0012 27.1 2.6 31 196-226 120-150 (156)
8 2hlv_A Odorant-binding protein 25.7 47 0.0016 26.4 3.1 31 196-226 122-152 (160)
9 3cqn_A Violaxanthin DE-epoxida 25.0 40 0.0014 29.2 2.7 32 196-227 141-172 (185)
10 3o22_A Prostaglandin-H2 D-isom 24.1 52 0.0018 26.2 3.1 31 196-226 124-154 (162)
11 2l5p_A Lipocalin 12; beta barr 23.9 56 0.0019 26.8 3.3 32 196-227 136-167 (184)
12 1dzk_A PIG OBP, odorant-bindin 22.5 46 0.0016 26.3 2.4 30 196-225 121-150 (157)
13 1ew3_A Allergen EQU C 1; lipoc 22.4 48 0.0016 26.1 2.5 30 196-225 120-149 (159)
14 3ov5_A VIRB7 (XAC2622), unchar 22.1 33 0.0011 26.1 1.3 24 194-218 7-30 (85)
15 3l4r_A Allergen DOG 2, minor a 22.0 54 0.0019 26.7 2.9 31 196-226 123-153 (170)
16 1epa_A Epididymal retinoic aci 21.5 57 0.002 25.7 2.8 30 196-225 120-149 (164)
17 2ra6_A Trichosurin; lipocalin, 21.2 45 0.0015 26.6 2.2 30 196-225 132-161 (166)
18 2l8s_A Integrin alpha-1; trans 21.1 1.6E+02 0.0053 20.6 4.6 42 164-205 8-49 (54)
19 3mk7_C Cytochrome C oxidase, C 20.4 62 0.0021 29.3 3.1 23 163-185 55-77 (311)
No 1
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=100.00 E-value=2.1e-64 Score=500.93 Aligned_cols=251 Identities=52% Similarity=0.940 Sum_probs=218.4
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCCCCchhccCCCHHHHHHHHHHhHhhhhHHhHHHHHHHH
Q psy7467 45 NLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNV 124 (295)
Q Consensus 45 ~~~~~~~~p~~~~~~il~~~~~~~l~e~yL~~RQ~r~~~~~~~vP~~l~~~~s~e~f~Ks~~Y~~~k~~f~~~~~l~~~i 124 (295)
+.||++..+..++++++++++++++||.||++||+|+++++.++|+++++++|+|+|+|||+|++||.+|++++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~il~~~~~~~~~e~yL~~RQ~~~~~~~~~vP~~l~~~~~~e~f~ka~~Y~~~k~~f~~~~~~~~~i 87 (482)
T 4aw6_A 8 DALWEMPAEKRIFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSET 87 (482)
T ss_dssp CCCSSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678887888999999999999999999999999999988889999999999999999999999999999999999887
Q ss_pred -------------------------------------------------------------------hc-CChHHHHHHH
Q psy7467 125 -------------------------------------------------------------------MN-TTYGFFVKDQ 136 (295)
Q Consensus 125 -------------------------------------------------------------------FN-~T~~~fl~D~ 136 (295)
|| ||++.|++|.
T Consensus 88 ~~~~~l~~g~~~~lw~~~~~~~~~~~~~~~~~i~~s~~f~~~~~l~~~l~~LP~~~Y~tfvle~~~Gfnk~t~~~f~~D~ 167 (482)
T 4aw6_A 88 EGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPWSLYNTFVIEEKHGFNQQTLGFFMKDA 167 (482)
T ss_dssp HHHHHHHHTHHHHHHHHTCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTCBCCCHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHhHHHHHHheeehhhcCCCCCCHHHHHHHH
Confidence 88 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhhhhHhhhhCCCccCCCchHHHHHHHHHHhCCC
Q psy7467 137 IKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKF 216 (295)
Q Consensus 137 lK~~lL~~vl~~pl~~~~~~ii~~~G~~~wl~~w~~~~~~~l~l~~iyP~lI~PLFnkftPLedgeLr~~Ie~La~r~GF 216 (295)
+|++++++++++|++++++++++++|++||+|+|++.++++++++++||.+|+|+||||+|+|||||+++|+++|+++||
T Consensus 168 ~k~~~l~~vi~~pl~~~~~~ii~~~g~~~wl~~w~~~~~~~l~~~~iyP~~I~PLfnk~~Pl~dg~L~~~Ie~la~~~~f 247 (482)
T 4aw6_A 168 IKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDF 247 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHTHHHHSCEEECCSSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCcHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCccEEEecCCCCcEEEEehhhhhhhcCCCcccCCCCC-------CCCcc--cccccccCCCCChh
Q psy7467 217 PLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSG-------DSEPL--ISTEGANKKGCDTE 287 (295)
Q Consensus 217 p~~~I~V~d~SkrS~hsNAyf~G~g~~KrIVL~DTLL~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~gl~~~ 287 (295)
|+++|||+||||||+|+||||+|++++||||++|||+++|++.+.++++.++ +++.+ +.+++|+|+||++|
T Consensus 248 p~~~v~vv~gSkRs~~~NAy~~G~~~~krIVl~dtLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 327 (482)
T 4aw6_A 248 PLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGCKNE 327 (482)
T ss_dssp CEEEEEEECGGGTBSCCCEEEEESSSCEEEEEEHHHHC------------------------------------CCCCHH
T ss_pred CCCcEEEEeCCCCCCCCceEEEcCCCCcEEEEEchHHHhcccccccccccccccccccccccchhhcccchhhccCCCHH
Confidence 9999999999999999999999999999999999999998776654443222 22222 33777999999999
Q ss_pred hhhhcccC
Q psy7467 288 EVLAVLAH 295 (295)
Q Consensus 288 EIlAVLAH 295 (295)
|++||+||
T Consensus 328 El~aVlaH 335 (482)
T 4aw6_A 328 EVLAVLGH 335 (482)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999999
No 2
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.25 E-value=5.4e-12 Score=101.39 Aligned_cols=72 Identities=17% Similarity=0.171 Sum_probs=60.9
Q ss_pred hCCCccCCC------chHHHHHHHHHHhCCCCCCcEEEEeCCCCCCCccEEEecCCCC-cEEEEehhhhhhhcCCCcccC
Q psy7467 192 FDKYTPLPD------GELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKN-KRIVLFDTLLKDYVPLNADKK 264 (295)
Q Consensus 192 FnkftPLed------geLr~~Ie~La~r~GFp~~~I~V~d~SkrS~hsNAyf~G~g~~-KrIVL~DTLL~~~~~~~~~~~ 264 (295)
..+.+|+++ ++|++.++++|++.|+|.+++|++|. ..+|||++|.++. +.|++++.|++.
T Consensus 11 ~~g~~~~~~~~~~~~~~L~~~~~~l~~~~~~~~~~v~v~~~----~~~NAf~~g~~~~~~~i~v~~gLl~~--------- 77 (107)
T 3cqb_A 11 SVGGMVIESPRNETEHWLLETVGRQAQQAGIGMPTVAIYDS----ADINAFATGAKRDDSLVAVSTGLLHN--------- 77 (107)
T ss_dssp CCTTEECSSCSSHHHHHHHHHHHHHHHHHTCCCCEEEEECC----SSEEEEEECCC--CCEEEEEHHHHHH---------
T ss_pred HcCCccCCCccchhHHHHHHHHHHHHHHcCCCCCeEEEEEC----CCcCEEEEecCCCCCEEEEcHHHHhh---------
Confidence 345777754 36999999999999999999999994 6799999999874 567788889998
Q ss_pred CCCCCCCcccccccccCCCCChhhhhhcccC
Q psy7467 265 DKSGDSEPLISTEGANKKGCDTEEVLAVLAH 295 (295)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~gl~~~EIlAVLAH 295 (295)
++++|+.|||||
T Consensus 78 -------------------l~~~El~aVlaH 89 (107)
T 3cqb_A 78 -------------------MTRDEAEAVLAH 89 (107)
T ss_dssp -------------------SCHHHHHHHHHH
T ss_pred -------------------CCHHHHHHHHHH
Confidence 999999999999
No 3
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=99.24 E-value=5.7e-12 Score=114.86 Aligned_cols=76 Identities=22% Similarity=0.339 Sum_probs=67.8
Q ss_pred hhhHhhhhCCCccCCCchHHHHHHHHHHhCCCCCC------cEEEEeCCCCCCCccEEEecCCCCcEEEEehhhhhhhcC
Q psy7467 185 PEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLK------KLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVP 258 (295)
Q Consensus 185 P~lI~PLFnkftPLedgeLr~~Ie~La~r~GFp~~------~I~V~d~SkrS~hsNAyf~G~g~~KrIVL~DTLL~~~~~ 258 (295)
.....+++++++|++|+++++.|++++++++++.+ ++||+|. ..+|||++|- .+||++|+||+.
T Consensus 24 ~~~~~~~~~~~~~~~d~~l~~~l~~l~~~l~~~~~~~~~~~~v~v~~~----~~~NAfa~~g---g~I~v~~gLl~~--- 93 (253)
T 3c37_A 24 NKFAVEIEKQQQPVNDPEVQRYVDKVGKRLLSGARAVEFDYVFKVVKD----DSVNAFAIPG---GRVYVHTGLLKA--- 93 (253)
T ss_dssp HHHHHHHHTTCCBCCCHHHHHHHHHHHHHHHHTSSCCCSCCEEEEECC----CSCCEEEETT---TEEEEEHHHHHH---
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeC----CCCCeeEcCC---CeEEeeHHHHhh---
Confidence 34567899999999999999999999999887765 8999994 5699999983 599999999998
Q ss_pred CCcccCCCCCCCCcccccccccCCCC-ChhhhhhcccC
Q psy7467 259 LNADKKDKSGDSEPLISTEGANKKGC-DTEEVLAVLAH 295 (295)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~gl-~~~EIlAVLAH 295 (295)
+ +++||.|||||
T Consensus 94 -------------------------l~~~~ELaaVLaH 106 (253)
T 3c37_A 94 -------------------------ADNETELAGVLAH 106 (253)
T ss_dssp -------------------------CSSHHHHHHHHHH
T ss_pred -------------------------CCCHHHHHHHHHH
Confidence 8 89999999999
No 4
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=51.06 E-value=5.9 Score=35.94 Aligned_cols=44 Identities=25% Similarity=0.296 Sum_probs=37.5
Q ss_pred hhCCCccCCCc-hHHHHHHHHHHhCCCCCCcEEEEeCCCCCCCccEEEecC
Q psy7467 191 LFDKYTPLPDG-ELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGF 240 (295)
Q Consensus 191 LFnkftPLedg-eLr~~Ie~La~r~GFp~~~I~V~d~SkrS~hsNAyf~G~ 240 (295)
.|+||+|++|. ++++.+.++|++.|.. .+|++-+ ..-|+.+.|-
T Consensus 19 ~~Y~f~~~~d~~~~~~~~~~~~~~~~~~-G~i~~a~-----eGiN~t~~g~ 63 (265)
T 4f67_A 19 SFYKFIPLNDFRSLREPILTKMHEIGIK-GTIILAH-----EGVNGGFAGN 63 (265)
T ss_dssp EEEEECCCTTHHHHHHHHHHHHHHHTCE-EEEEEET-----TEEEEEEEEC
T ss_pred EEeCeecCCCHHHHHHHHHHHHHHCCCe-EEEEEcC-----ccceEEEEeC
Confidence 78899999985 5999999999999876 6777765 6789999885
No 5
>3sao_A Extracellular fatty acid-binding protein; beta-barrel, siderophore binding protein, transport protein; HET: NKN DBH; 1.80A {Gallus gallus} SCOP: b.60.1.1 PDB: 1jzu_A 2kt4_B* 2lbv_A*
Probab=30.22 E-value=43 Score=26.82 Aligned_cols=32 Identities=6% Similarity=0.036 Sum_probs=26.8
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEeCC
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVEGS 227 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d~S 227 (295)
+|-.+++..++..++|++.||+.++|..++-+
T Consensus 117 ~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~~ 148 (160)
T 3sao_A 117 SREVSPTAMAIFRKLARERNYTDEMVAVLPSQ 148 (160)
T ss_dssp SSSCCHHHHHHHHHHHHTTTCCGGGEEECCCC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHEEECCCC
Confidence 45456789999999999999999999888743
No 6
>1e5p_A Aphrodisin; lipocalin, pheromone, hamster,; HET: MSE; 1.63A {Mesocricetus auratus} SCOP: b.60.1.1
Probab=28.62 E-value=38 Score=26.60 Aligned_cols=31 Identities=13% Similarity=0.149 Sum_probs=25.5
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEeC
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVEG 226 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d~ 226 (295)
+|--+++..++..++|++.||+.++|...+-
T Consensus 115 ~~~l~~e~~~~f~~~~~~~G~~~~~ii~~~~ 145 (151)
T 1e5p_A 115 GNALTPEENEILVQFAHEKKIPVENILNILA 145 (151)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCCGGGEEECGG
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHEEECCc
Confidence 4433578999999999999999999987663
No 7
>1bj7_A D 2; allergen, lipocalin; 1.80A {Bos taurus} SCOP: b.60.1.1
Probab=27.50 E-value=34 Score=27.10 Aligned_cols=31 Identities=13% Similarity=0.029 Sum_probs=25.7
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEeC
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVEG 226 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d~ 226 (295)
+|-.+++.+++..++|++.||+.++|...+-
T Consensus 120 ~~~l~~e~~~~f~~~~~~~G~~~~~i~~~~~ 150 (156)
T 1bj7_A 120 GTSFTPEELEKYQQLNSERGVPNENIENLIK 150 (156)
T ss_dssp SSCCCHHHHHHHHHHHHHHTCCGGGEEECGG
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHEEecCC
Confidence 4434578999999999999999999987663
No 8
>2hlv_A Odorant-binding protein; domain swapping, transport protein; HET: LIK; 1.65A {Bos taurus} PDB: 1gt1_A* 1gt3_A* 1gt4_A* 1gt5_A* 1hn2_A* 1obp_A 1g85_A 1pbo_A*
Probab=25.66 E-value=47 Score=26.38 Aligned_cols=31 Identities=10% Similarity=-0.066 Sum_probs=25.7
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEeC
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVEG 226 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d~ 226 (295)
+|-.+++..++..++|++.||+.++|...+-
T Consensus 122 ~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~ 152 (160)
T 2hlv_A 122 GLNVEDEDLEKFWKLTEDKGIDKKNVVNFLE 152 (160)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCCGGGEEETTS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHEEECCC
Confidence 3444678999999999999999999987663
No 9
>3cqn_A Violaxanthin DE-epoxidase, chloroplast; lipocalin, enzyme, xanthophyll cycle, non photochemical quenching, NPQ, antheraxanthin, zeaxanthin; 2.00A {Arabidopsis thaliana} PDB: 3cqr_A
Probab=24.99 E-value=40 Score=29.20 Aligned_cols=32 Identities=6% Similarity=0.175 Sum_probs=26.9
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEeCC
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVEGS 227 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d~S 227 (295)
+|-..+|+.++.++.|++.|+..+++.++|.|
T Consensus 141 sp~l~peale~f~~fa~~~Gl~~e~~~~~dn~ 172 (185)
T 3cqn_A 141 SSVLPNSIIPELEKAAKSIGRDFSTFIRTDNT 172 (185)
T ss_dssp SSSCCGGGHHHHHHHHHHTTCCGGGSEECCCC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHEEEecCC
Confidence 34345688889999999999999999999965
No 10
>3o22_A Prostaglandin-H2 D-isomerase; lipocalin, prostaglandin synthase; HET: OLA PLM; 1.40A {Homo sapiens} PDB: 3o19_A* 3o2y_A* 2wwp_A 2czt_A 2czu_A 2rq0_A 2e4j_A 2ktd_A*
Probab=24.08 E-value=52 Score=26.19 Aligned_cols=31 Identities=19% Similarity=0.328 Sum_probs=25.8
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEeC
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVEG 226 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d~ 226 (295)
+|-.+++..++..++|++.|++.++|...+-
T Consensus 124 ~~~~~~~~~~~f~~~~~~~G~~~~~i~~~~q 154 (162)
T 3o22_A 124 TQTPRAELKEKFTAFCKAQGFTEDTIVFLPQ 154 (162)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCCGGGEEECCB
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHEEECCC
Confidence 4544678899999999999999999987763
No 11
>2l5p_A Lipocalin 12; beta barrel, transport protein; NMR {Rattus norvegicus}
Probab=23.93 E-value=56 Score=26.78 Aligned_cols=32 Identities=9% Similarity=-0.002 Sum_probs=26.6
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEeCC
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVEGS 227 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d~S 227 (295)
+|-.+++..++..+++++.||+.++|...+-+
T Consensus 136 ~~~~~~e~~~~f~~~~~~~G~~~~~ii~~~q~ 167 (184)
T 2l5p_A 136 DWKITHKTIDRFIALTKTQNLTKNNLLFPDLT 167 (184)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCCGGGEECCCCS
T ss_pred CCCCCHHHHHHHHHHHHHcCCChHHEEEcCCC
Confidence 35456788999999999999999999877744
No 12
>1dzk_A PIG OBP, odorant-binding protein; lipocalin, transport, olfaction, sensory transduction; HET: PRZ; 1.48A {Sus scrofa} SCOP: b.60.1.1 PDB: 1dzj_A* 1dzm_A* 1dzp_A* 1e00_A* 1e02_A* 1e06_A* 1hqp_A* 1a3y_A
Probab=22.54 E-value=46 Score=26.25 Aligned_cols=30 Identities=3% Similarity=0.057 Sum_probs=25.0
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEe
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVE 225 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d 225 (295)
+|-.+++..++..++|++.||+.++|...+
T Consensus 121 ~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~ 150 (157)
T 1dzk_A 121 GTDIEDQDLEKFKEVTRENGIPEENIVNII 150 (157)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCCGGGEEESG
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHEEECC
Confidence 443457899999999999999999998765
No 13
>1ew3_A Allergen EQU C 1; lipocalin, beta barrel; 2.30A {Equus caballus} SCOP: b.60.1.1
Probab=22.35 E-value=48 Score=26.11 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=25.2
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEe
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVE 225 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d 225 (295)
+|-.+++..++..++|++.||+.++|...+
T Consensus 120 ~~~~~~~~~~~f~~~~~~~G~~~~~i~~~~ 149 (159)
T 1ew3_A 120 EPDVSPEIKEEFVKIVQKRGIVKENIIDLT 149 (159)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCCGGGEEEGG
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHEEECC
Confidence 454567899999999999999999997655
No 14
>3ov5_A VIRB7 (XAC2622), uncharacterized protein; type IV secretion system component, bacteri membrane, xanthomonas axonopodis PV citri; 1.04A {Xanthomonas axonopodis PV}
Probab=22.06 E-value=33 Score=26.09 Aligned_cols=24 Identities=38% Similarity=0.650 Sum_probs=20.7
Q ss_pred CCccCCCchHHHHHHHHHHhCCCCC
Q psy7467 194 KYTPLPDGELKSRIEQLSASVKFPL 218 (295)
Q Consensus 194 kftPLedgeLr~~Ie~La~r~GFp~ 218 (295)
+.+|+ ||.||..+|+.|+..+.++
T Consensus 7 qatpm-DgTlK~mLERWa~ds~m~l 30 (85)
T 3ov5_A 7 QATPM-DGTLKTMLERWAADSNMQL 30 (85)
T ss_dssp ECCTT-CCBHHHHHHHHHHTTTCEE
T ss_pred Eeecc-chHHHHHHHHHHhhcCCee
Confidence 46787 7999999999999988874
No 15
>3l4r_A Allergen DOG 2, minor allergen CAN F 2; lipocalin allergen, disulfide bond, secreted, TRAN lipid binding protein; 1.45A {Canis familiaris}
Probab=22.04 E-value=54 Score=26.70 Aligned_cols=31 Identities=6% Similarity=0.155 Sum_probs=25.3
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEeC
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVEG 226 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d~ 226 (295)
+|-.+++..++..+++++.|++.++|..++-
T Consensus 123 ~~~~~~e~~~~f~~~~~~~Gl~~~~i~~~~~ 153 (170)
T 3l4r_A 123 DLSRQQDFLPAFESVCEDIGLHKDQIVVLSD 153 (170)
T ss_dssp CGGGTTTTHHHHHHHHHHTTCCGGGEEECCT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHEEECCC
Confidence 3434567889999999999999999987763
No 16
>1epa_A Epididymal retinoic acid-binding protein; 2.10A {Rattus norvegicus} SCOP: b.60.1.1 PDB: 1epb_A*
Probab=21.49 E-value=57 Score=25.73 Aligned_cols=30 Identities=17% Similarity=0.344 Sum_probs=25.3
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEe
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVE 225 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d 225 (295)
+|-.+++..+++.++|++.||+.++|..++
T Consensus 120 ~~~l~~~~~~~~~~~~~~~G~~~~~i~~~~ 149 (164)
T 1epa_A 120 SLDDNGEALYNFRKITSDHGFSETDLYILK 149 (164)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCCGGGEEECC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHEEECC
Confidence 454467889999999999999999998766
No 17
>2ra6_A Trichosurin; lipocalin, beta barrel, glycoprotein, MILK protein, secreted, transport, transport protein; 1.50A {Trichosurus vulpecula} PDB: 2r73_A 2r74_A
Probab=21.24 E-value=45 Score=26.62 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=25.0
Q ss_pred ccCCCchHHHHHHHHHHhCCCCCCcEEEEe
Q psy7467 196 TPLPDGELKSRIEQLSASVKFPLKKLYVVE 225 (295)
Q Consensus 196 tPLedgeLr~~Ie~La~r~GFp~~~I~V~d 225 (295)
+|-.+++..++..++|++.||+.++|...+
T Consensus 132 ~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~ 161 (166)
T 2ra6_A 132 TPNLSNEIKKRFEEDFMNRGFRRENILDIS 161 (166)
T ss_dssp SSCCCHHHHHHHHHHHHTTTCCGGGEEEGG
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHEEECC
Confidence 344467899999999999999999997655
No 18
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=21.14 E-value=1.6e+02 Score=20.60 Aligned_cols=42 Identities=12% Similarity=0.148 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHhhhhCCCccCCCchHHH
Q psy7467 164 MVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKS 205 (295)
Q Consensus 164 ~~wl~~w~~~~~~~l~l~~iyP~lI~PLFnkftPLedgeLr~ 205 (295)
.+|+++.....++.++...++-.+=.=.|.+-+|-++++|..
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK~GFFKR~~~~~~~~~~~ 49 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWKIGFFKRPLKKKMEKLEH 49 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCCC---
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCCCcchhhHHhh
Confidence 355555444444444444444444445676666655566643
No 19
>3mk7_C Cytochrome C oxidase, CBB3-type, subunit P; TM helices, oxidoreductase; HET: HEM HEC FC6; 3.20A {Pseudomonas stutzeri}
Probab=20.42 E-value=62 Score=29.27 Aligned_cols=23 Identities=13% Similarity=0.547 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhh
Q psy7467 163 NMVFLYLWVFIILMSLFLMTIYP 185 (295)
Q Consensus 163 ~~~wl~~w~~~~~~~l~l~~iyP 185 (295)
+.||++++.+.+++.++-.++||
T Consensus 55 p~ww~~~f~~~iv~~~~y~~~yp 77 (311)
T 3mk7_C 55 PRWWFLLFIGTLVFGILYLVLYP 77 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHST
T ss_pred ChHHHHHHHHHHHHHHHHHHHHh
Confidence 45889999999999888888888
Done!