RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy747
(380 letters)
>gnl|CDD|188655 cd09823, peroxinectin_like, peroxinectin_like animal heme
peroxidases. Peroxinectin is an arthropod protein that
plays a role in invertebrate immunity mechanisms.
Specifically, peroxinectins are secreted as
cell-adhesive and opsonic peroxidases. The immunity
mechanism appears to involve an interaction between
peroxinectin and a transmembrane receptor of the
integrin family. Human myeloperoxidase, which is
included in this wider family, has also been reported to
interact with integrins.
Length = 378
Score = 320 bits (822), Expect = e-107
Identities = 133/360 (36%), Positives = 178/360 (49%), Gaps = 54/360 (15%)
Query: 59 LTHFLDVSPVYGSTRKIAEKLRLFKGGLLKGQHVGGKEYPPNYGRPKSKCDIQPDEPAVC 118
+T FLD S VYGS+ + A KLR FKGGLLK Q G+E P + + C
Sbjct: 7 VTSFLDGSQVYGSSEEEARKLRTFKGGLLKTQRRNGRELLP-FSNNPTDDCSLSSAGKPC 65
Query: 119 YFAGDSRANQNSFLTPLQVLFLRLHNILAREFAKINHHWDDERLYQEARKTVIGIYQWIT 178
+ AGD R N+ LT + LFLR HN +A E K+N HWDDERL+QEARK VI Q IT
Sbjct: 66 FLAGDGRVNEQPGLTSMHTLFLREHNRIADELKKLNPHWDDERLFQEARKIVIAQMQHIT 125
Query: 179 YEEMLPVLIDITYM--------------------------------------MI------ 194
Y E LP+L+ M ++
Sbjct: 126 YNEFLPILLGRELMEKFGLYLLTSGYFNGYDPNVDPSILNEFAAAAFRFGHSLVPGTFER 185
Query: 195 --AKSGKAAQIDMVTWMHRPSIV--QGYLDHLLEGQQTQFIQPFEDWWEDFNINNKLKTN 250
+++ P + +G LD LL G TQ Q + ++ D +
Sbjct: 186 LDENYRPQGSVNLHDLFFNPDRLYEEGGLDPLLRGLATQPAQKVDRFFTDELTTHFFFRG 245
Query: 251 HPPFQYDPHGDDLTAIGIQRQRDYGMPGYNEFRKYAGLKPVKSFEELSDVIGPENIHLLK 310
PF G DL A+ IQR RD+G+PGYN++R++ GL +F++L ++ PE I L+
Sbjct: 246 GNPF-----GLDLAALNIQRGRDHGLPGYNDYREFCGLPRATTFDDLLGIMSPETIQKLR 300
Query: 311 LGYKHVDDIDLFVGGYLENPLHDSLFGPTFTYVIADQFYRWKFGDRFWFSVLGKPWSFTE 370
YK VDDIDL+VGG E P+ L GPTF +I +QF R + GDRFW+ G+P SFT
Sbjct: 301 RLYKSVDDIDLYVGGLSEKPVPGGLVGPTFACIIGEQFRRLRRGDRFWYENGGQPSSFTP 360
>gnl|CDD|217366 pfam03098, An_peroxidase, Animal haem peroxidase.
Length = 521
Score = 306 bits (785), Expect = e-100
Identities = 146/405 (36%), Positives = 190/405 (46%), Gaps = 65/405 (16%)
Query: 16 CLPIPILKDHFYNNHSVTCINMVRGMTTDDLG-CPLSPIQHVIDLTHFLDVSPVYGSTRK 74
C PIP+ Y + C+ R G P + + LT +LD+S VYGS+ +
Sbjct: 102 CFPIPVPPGDPYFSPFGRCLPFFRSAPACGTGPSCNLPREQINQLTSYLDLSQVYGSSEE 161
Query: 75 IAEKLRLFKGGLLK----GQHVGGKEYPPNYGRPKSKCDIQPDEPAVCYFAGDSRANQNS 130
A+KLR FK G LK GK P S C C+ AGDSR N+N
Sbjct: 162 EADKLRTFKDGKLKVNGEFPPPNGKGLLPAPPPGPSGC-------LSCFLAGDSRVNENP 214
Query: 131 FLTPLQVLFLRLHNILAREFAKINHHWDDERLYQEARKTVIGIYQWITYEEMLPVLIDIT 190
LT L LFLR HN +A E +N HW DE+L+QEAR VI YQ ITY E LP L+
Sbjct: 215 GLTALHTLFLREHNRIADELKALNPHWSDEKLFQEARLIVIAQYQKITYNEYLPALLGPD 274
Query: 191 YM----------------------------------MI--------AKSGKAAQIDMVTW 208
M +I A +I +
Sbjct: 275 LMRANWLLLYYTGYDPNVDPSISNEFATAAYRFGHSLIPPGLERLDEFRTIAPEIPLHDT 334
Query: 209 MHRPS-IVQGYLDHLLEGQQTQFIQPFEDWWEDFNINNKLKTNHPPFQYDPHGDDLTAIG 267
PS I++ +D LL G +Q + D + N+L P + G DL A+
Sbjct: 335 FFNPSRILEEGIDPLLRGLASQPAEL-LDNSLSDELRNRL---FGPRNFPGSGLDLAALN 390
Query: 268 IQRQRDYGMPGYNEFRKYAGLKPVKSFEELSDVIGPENI--HLLKLGYKHVDDIDLFVGG 325
IQR RD+G+P YNE+R++ GLKP SFE+L+D IG E + L +L Y DDIDL+VGG
Sbjct: 391 IQRGRDHGLPPYNEYRRFCGLKPATSFEDLTDEIGDEELAEKLKEL-YGDPDDIDLWVGG 449
Query: 326 YLENPLHDSLFGPTFTYVIADQFYRWKFGDRFWFSVLGKPWSFTE 370
E P+ L GPTF +IA+QF R + GDRFW+ P FT
Sbjct: 450 LAEKPVPGGLVGPTFACIIAEQFLRLRDGDRFWYE---NPGVFTG 491
>gnl|CDD|188647 cd05396, An_peroxidase_like, Animal heme peroxidases and related
proteins. A diverse family of enzymes, which includes
prostaglandin G/H synthase, thyroid peroxidase,
myeloperoxidase, linoleate diol synthase,
lactoperoxidase, peroxinectin, peroxidasin, and others.
Despite its name, this family is not restricted to
metazoans: members are found in fungi, plants, and
bacteria as well.
Length = 370
Score = 203 bits (518), Expect = 4e-62
Identities = 112/344 (32%), Positives = 148/344 (43%), Gaps = 48/344 (13%)
Query: 60 THFLDVSPVYGSTRKIAEKLRLFKGGLLK----GQHVGGKEYPPNYGRPKSKCDIQPDEP 115
T +LD S +YGS +A LR FKGGLLK G E P P P
Sbjct: 6 TPYLDGSSIYGSNPDVARALRTFKGGLLKTNEVKGPSYGTELLPFNN-PNPSMGTIGLPP 64
Query: 116 AVCYFAGDSRANQNSFLTPLQVLFLRLHNILAREFAKINHHWDDERLYQEARKTVIGIYQ 175
C+ AGD R N+N L + LFLR HN LA K + WDDERLYQEAR VI YQ
Sbjct: 65 TRCFIAGDPRVNENLLLLAVHTLFLREHNRLADRLKKEHPEWDDERLYQEARLIVIAQYQ 124
Query: 176 WITYEEMLPVLIDITYM--------MIAKSGKAAQIDMVT-----WMHRPSIVQGYLDHL 222
ITY E LP ++ + + H + +G
Sbjct: 125 LITYNEYLPAILGKFTDPRDDLVLLFPDPDVVPYVLSEFFTAAYRFGH-SLVPEGVDRID 183
Query: 223 LEGQQTQF-IQPFEDWWEDFNINNKLKT-----------NHPPF-------------QYD 257
GQ + P +D++ + + + T +
Sbjct: 184 ENGQPKEIPDVPLKDFFFNTSRSILSDTGLDPLLRGFLRQPAGLIDQNVDDVMFLFGPLE 243
Query: 258 PHGDDLTAIGIQRQRDYGMPGYNEFRKYAGLKPVKSFEE-LSDVIGPENIHLLKLGYKHV 316
G DL A+ IQR RD G+P YNE R++ GLKP SF++ L+D PE L Y
Sbjct: 244 GVGLDLAALNIQRGRDLGLPSYNEVRRFIGLKPPTSFQDILTD---PELAKKLAELYGDP 300
Query: 317 DDIDLFVGGYLENPLHDSLFGPTFTYVIADQFYRWKFGDRFWFS 360
DD+DL+VGG LE + + G +I +QF R GDRF++
Sbjct: 301 DDVDLWVGGLLEKKVPPARLGELLATIILEQFKRLVDGDRFYYV 344
>gnl|CDD|188658 cd09826, peroxidasin_like, Animal heme peroxidase domain of
peroxidasin and related proteins. Peroxidasin is a
secreted heme peroxidase which is involved in hydrogen
peroxide metabolism and peroxidative reactions in the
cardiovascular system. The domain co-occurs with
extracellular matrix domains and may play a role in the
formation of the extracellular matrix.
Length = 440
Score = 124 bits (313), Expect = 9e-32
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 262 DLTAIGIQRQRDYGMPGYNEFRKYAGLKPVKSFEELSDVIG-PENIHLLKLGYKHVDDID 320
DL A+ IQR RD+G+PGYN++RK+ L ++FE+L + I + LK Y H +ID
Sbjct: 290 DLAALNIQRGRDHGLPGYNDYRKFCNLSVAETFEDLKNEIKNDDVREKLKRLYGHPGNID 349
Query: 321 LFVGGYLENPLHDSLFGPTFTYVIADQFYRWKFGDRFWFSVLGKPWSFTE 370
LFVGG LE+ L + GPT ++A+QF R + GDRFW+ P F+
Sbjct: 350 LFVGGILEDLLPGARVGPTLACLLAEQFRRLRDGDRFWYE---NPGVFSP 396
Score = 122 bits (308), Expect = 4e-31
Identities = 65/184 (35%), Positives = 88/184 (47%), Gaps = 16/184 (8%)
Query: 24 DHFYNNHSVTCINMVR-------GMTTDDLGCPLSPIQHVIDLTHFLDVSPVYGSTRKIA 76
D H CI VR G T+ ++P + + LT ++D S VYGS+ + A
Sbjct: 4 DPRRRGHR--CIEFVRSSAVCGSGSTSLLFN-SVTPREQINQLTSYIDASNVYGSSDEEA 60
Query: 77 EKLRLFKG--GLLKGQHV--GGKEYPPNYGRPKSKCDIQPDE-PAVCYFAGDSRANQNSF 131
+LR GLL+ V GK P C P+E P C+ AGD RAN+
Sbjct: 61 LELRDLASDRGLLRVGIVSEAGKPLLPFERDSPMDCRRDPNESPIPCFLAGDHRANEQLG 120
Query: 132 LTPLQVLFLRLHNILAREFAKINHHWDDERLYQEARKTVIGIYQWITYEEMLP-VLIDIT 190
LT + L+LR HN +A E ++N HWD E +Y E RK V Q ITY LP +L +
Sbjct: 121 LTSMHTLWLREHNRIASELLELNPHWDGETIYHETRKIVGAQMQHITYSHWLPKILGPVG 180
Query: 191 YMMI 194
M+
Sbjct: 181 MEML 184
>gnl|CDD|188654 cd09822, peroxinectin_like_bacterial, Uncharacterized family of
heme peroxidases, mostly bacterial. Animal heme
peroxidases are diverse family of enzymes which are not
restricted to animals. Members are also found in
metazoans, fungi, and plants, and also in bacteria -
like most members of this family of uncharacterized
proteins.
Length = 420
Score = 122 bits (309), Expect = 2e-31
Identities = 54/137 (39%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 51 SPIQHVIDLTHFLDVSPVYGSTRKIAEKLRLFKGGLLKGQHVGGKEYPPNYGRPKSKCDI 110
+P + + +T ++D S VYGS + A+ LR F GG LK + P + D
Sbjct: 46 NPREQINAITAYIDGSNVYGSDEERADALRSFGGGKLKTSVANAGDLLP-FNEAGLPNDN 104
Query: 111 QPDEPAVCYFAGDSRANQNSFLTPLQVLFLRLHNILAREFAKINHHWDDERLYQEARKTV 170
+ AGD RAN+N LT L LF+R HN LA E A+ N DE +YQ AR V
Sbjct: 105 GGVPADDLFLAGDVRANENPGLTALHTLFVREHNRLADELARRNPSLSDEEIYQAARAIV 164
Query: 171 IGIYQWITYEEMLPVLI 187
I Q ITY E LP L+
Sbjct: 165 IAEIQAITYNEFLPALL 181
Score = 121 bits (306), Expect = 5e-31
Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 214 IVQGYLDHLLEGQQTQFIQPFEDWWEDFNINNKLKTNHPPFQYDPHGDDLTAIGIQRQRD 273
+ + +D LL G +Q Q D + ++ N L PP G DL A+ IQR RD
Sbjct: 245 LEENGIDPLLRGLASQVAQEI-DTFIVDDVRNFL--FGPP---GAGGFDLAALNIQRGRD 298
Query: 274 YGMPGYNEFRKYAGLKPVKSFEEL-SDVIGPENIHLLKLGYKHVDDIDLFVGGYLENPLH 332
+G+P YN+ R+ GL V SF ++ SD P+ L Y VD IDL+VGG E+ ++
Sbjct: 299 HGLPSYNQLREALGLPAVTSFSDITSD---PDLAARLASVYGDVDQIDLWVGGLAEDHVN 355
Query: 333 DSLFGPTFTYVIADQFYRWKFGDRFWF 359
L G TF+ +IADQF R + GDRF++
Sbjct: 356 GGLVGETFSTIIADQFTRLRDGDRFFY 382
>gnl|CDD|188657 cd09825, thyroid_peroxidase, Thyroid peroxidase (TPO). TPO is a
member of the animal heme peroxidase family, which is
expressed in the thyroid and involved in the processing
of iodine and iodine compounds. Specifically, TPO
oxidizes iodide via hydrogen peroxide to form active
iodine, which is then, for example, incorporated into
the tyrosine residues of thyroglobulin to yield mono-
and di-iodotyrosines.
Length = 565
Score = 112 bits (283), Expect = 2e-27
Identities = 65/191 (34%), Positives = 94/191 (49%), Gaps = 23/191 (12%)
Query: 16 CLPIPILKDH----------FYNNHSVTCINMVRGMTTDDLG--CPLSPIQHVIDLTHFL 63
C PI + + F+ + +V C G T+ G +P + + LT F+
Sbjct: 103 CFPIQLPSEDPRILGRACLPFFRSSAV-CGT---GDTSTLFGNLSLANPREQINGLTSFI 158
Query: 64 DVSPVYGSTRKIAEKLRLFKG--GLLK---GQHVGGKEYPPNYGRPKSKCDIQPDEPAV- 117
D S VYGST +A LR GLL+ G++Y P S C+ P+
Sbjct: 159 DASTVYGSTLALARSLRDLSSDDGLLRVNSKFDDSGRDYLPFQPEEVSSCNPDPNGGERV 218
Query: 118 -CYFAGDSRANQNSFLTPLQVLFLRLHNILAREFAKINHHWDDERLYQEARKTVIGIYQW 176
C+ AGD RA++ LT L+LR HN LAR IN HWD E++YQEARK V ++Q
Sbjct: 219 PCFLAGDGRASEVLTLTASHTLWLREHNRLARALKSINPHWDGEQIYQEARKIVGALHQI 278
Query: 177 ITYEEMLPVLI 187
IT+ + +P ++
Sbjct: 279 ITFRDYIPKIL 289
Score = 92.9 bits (231), Expect = 2e-20
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 262 DLTAIGIQRQRDYGMPGYNEFRKYAGLKPVKSFEELSDVIGPENIHLLKLG--YKHVDDI 319
DL ++ +QR RD+G+PGYN++R++ GL + + +L+ I + K+ YKH D+I
Sbjct: 405 DLASLNLQRGRDHGLPGYNDWREFCGLPRLATPADLATAIA-DQAVADKILDLYKHPDNI 463
Query: 320 DLFVGGYLENPLHDSLFGPTFTYVIADQFYRWKFGDRFWF 359
D+++GG E+ L + GP F +I Q + GDRFW+
Sbjct: 464 DVWLGGLAEDFLPGARTGPLFACLIGKQMKALRDGDRFWW 503
>gnl|CDD|188648 cd09816, prostaglandin_endoperoxide_synthase, Animal prostaglandin
endoperoxide synthase and related bacterial proteins.
Animal prostaglandin endoperoxide synthases, including
prostaglandin H2 synthase and a set of similar bacterial
proteins which may function as cyclooxygenases.
Prostaglandin H2 synthase catalyzes the synthesis of
prostaglandin H2 from arachidonic acid. In two reaction
steps, arachidonic acid is converted to Prostaglandin
G2, a peroxide (cyclooxygenase activity) and
subsequently converted to the end product via the
enzyme's peroxidase activity. Prostaglandin H2 synthase
is the target of aspirin and other non-steroid
anti-inflammatory drugs such as ibuprofen, which block
the substrate's access to the active site and may
acetylate a conserved serine residue. In humans and
other mammals, prostaglandin H2 synthase (PGHS), also
called cyclooxygenase (COX) is present as at least two
isozymes, PGHS-1 (or COX-1) and PGHS-2 (or COX-2),
respectively. PGHS-1 is expressed constitutively in most
mammalian cells, while the expression of PGHS-2 is
induced via inflammation response in endothelial cells,
activated macrophages, and others. COX-3 is a splice
variant of COX-1.
Length = 490
Score = 104 bits (261), Expect = 2e-24
Identities = 47/135 (34%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 59 LTHFLDVSPVYGSTRKIAEKLRLFKGGLLKGQHVGGKEYPPNY-----------GRPKSK 107
H +D+S +YG T LRLFK G LK Q + G+EYPP
Sbjct: 127 SNHGIDLSQIYGLTEARTHALRLFKDGKLKSQMINGEEYPPYLFEDGGVKMEFPPLVPPL 186
Query: 108 CDIQPDEPAVCYFA-GDSRANQNSFLTPLQVLFLRLHNILAREFAKINHHWDDERLYQEA 166
D E FA G R N L L ++LR HN + K + WDDERL+Q A
Sbjct: 187 GDELTPEREAKLFAVGHERFNLTPGLFMLNTIWLREHNRVCDILKKEHPDWDDERLFQTA 246
Query: 167 RKTVIGIYQWITYEE 181
R +IG I E+
Sbjct: 247 RNILIGELIKIVIED 261
Score = 66.5 bits (163), Expect = 5e-12
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 268 IQRQRDYGMPGYNEFRKYAGLKPVKSFEELS-DVIGPENIHLLKLGYKHVDDIDLFVGGY 326
I++ R + +N++RK GL P SFEEL+ D PE L+ Y VD ++ +VG +
Sbjct: 365 IEQGRKLRLASFNDYRKRFGLPPYTSFEELTGD---PEVAAELEELYGDVDAVEFYVGLF 421
Query: 327 LENPLHDSLFGPTFTYVIA 345
E+P +S P ++A
Sbjct: 422 AEDPRPNSPLPPLMVEMVA 440
>gnl|CDD|188656 cd09824, myeloperoxidase_like, Myeloperoxidases, eosinophil
peroxidases, and lactoperoxidases. This well conserved
family of animal heme peroxidases contains members with
somewhat diverse functions. Myeloperoxidases are
lysosomal proteins found in azurophilic granules of
neutrophils and the lysosomes of monocytes. They are
involved in the formation of microbicidal agents upon
activation of activated neutrophils (neutrophils
undergoing respiratory bursts as a result of
phagocytosis), by catalyzing the conversion of hydrogen
peroxide to hypochlorous acid. As a heme protein,
myeloperoxidase is responsible for the greenish tint of
pus, which is rich in neutrophils. Eosinophil
peroxidases are haloperoxidases as well, preferring
bromide over chloride. Expressed by eosinophil
granulocytes, they are involved in attacking
multicellular parasites and play roles in various
inflammatory diseases such as asthma. The haloperoxidase
lactoperoxidase is secreted from mucosal glands and
provides antibacterial activity by oxidizing a variety
of substrates such as bromide or chloride in the
presence of hydrogen peroxide.
Length = 411
Score = 102 bits (257), Expect = 3e-24
Identities = 54/135 (40%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 59 LTHFLDVSPVYGSTRKIAEKLRLF--KGGLLK--GQHV-GGKEYPPNYGRPKSKCDIQPD 113
LT F+D S VYGS +A+ LR + GLL + G P C ++
Sbjct: 18 LTSFVDASMVYGSEPSLAKXLRNLTNQLGLLAVNQRFTDNGLALLPFENLHNDPCALRNT 77
Query: 114 EPAV-CYFAGDSRANQNSFLTPLQVLFLRLHNILAREFAKINHHWDDERLYQEARKTVIG 172
+ C+ AGD+R ++N L L L LR HN LARE ++N HWD E LYQEARK V
Sbjct: 78 SANIPCFLAGDTRVSENPGLAALHTLLLREHNRLARELHRLNPHWDGETLYQEARKIVGA 137
Query: 173 IYQWITYEEMLPVLI 187
+ Q ITY + LP+++
Sbjct: 138 MVQIITYRDYLPLIL 152
Score = 82.5 bits (204), Expect = 3e-17
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 6/113 (5%)
Query: 260 GDDLTAIGIQRQRDYGMPGYNEFRKYAGLKPVKSFEELSDVIGPENI--HLLKLGYKHVD 317
G DL A+ +QR RD+G+PGYN +R++ GL ++ EL+ V+ + LL L Y D
Sbjct: 264 GLDLAALNLQRGRDHGLPGYNAWRRFCGLSQPQNLAELAAVLNNTVLARKLLDL-YGTPD 322
Query: 318 DIDLFVGGYLENPLHDSLFGPTFTYVIADQFYRWKFGDRFWFSVLGKPWSFTE 370
+ID+++GG E + GP +I+ QF R + GDRFW+ P FTE
Sbjct: 323 NIDIWIGGVAEPLVPGGRVGPLLACLISRQFRRIRDGDRFWWE---NPGVFTE 372
>gnl|CDD|188652 cd09820, dual_peroxidase_like, Dual oxidase and related animal heme
peroxidases. Animal heme peroxidases of the
dual-oxidase like subfamily play vital roles in the
innate mucosal immunity of gut epithelia. They provide
reactive oxygen species which help control infection.
Length = 558
Score = 102 bits (256), Expect = 9e-24
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 49 PLSPIQHVIDLTHFLDVSPVYGSTRKIAEKLRLFKGGLLKGQHVGGKEYPPNYGR----- 103
P +P + + ++T ++D S +YGS++ ++ LR F GG L G N R
Sbjct: 127 PNNPREQLNEVTSWIDGSSIYGSSKAWSDALRSFSGGRLA-SGDDGGFPRRNTNRLPLAN 185
Query: 104 PKSKCDIQPDEPAVCYFAGDSRANQNSFLTPLQVLFLRLHNILAREFAKINHHWDDERLY 163
P P + G+ R N+N FL +L+ R HN LA+ A+ + W DE ++
Sbjct: 186 PPPPSYHGTRGPERLFKLGNPRGNENPFLLTFGILWFRYHNYLAQRIAREHPDWSDEDIF 245
Query: 164 QEARKTVIGIYQWITYEEMLPVLI 187
QEARK VI YQ I + E LP L+
Sbjct: 246 QEARKWVIATYQNIVFYEWLPALL 269
Score = 95.4 bits (238), Expect = 2e-21
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 262 DLTAIGIQRQRDYGMPGYNEFRKYAGLKPVKSFEELSDV---IGPENI-HLLKLGYKHVD 317
DL A+ IQR RD+G+P YN R+ GL P ++ +++ PE + L +L +
Sbjct: 384 DLMALNIQRGRDHGLPDYNTAREAFGLPPRTTWSDINPDLFKKDPELLERLAELYGNDLS 443
Query: 318 DIDLFVGGYLENPLHDSLFGPTFTYVIADQFYRWKFGDRFWF 359
+DL+VGG LE G F +I DQF R + GDRFWF
Sbjct: 444 KLDLYVGGMLE--SKGGGPGELFRAIILDQFQRLRDGDRFWF 483
>gnl|CDD|188650 cd09818, PIOX_like, Animal heme oxidases similar to plant
pathogen-inducible oxygenases. This is a diverse family
of oxygenases related to the animal heme peroxidases,
with members from plants, animals, and bacteria. The
plant pathogen-inducible oxygenases (PIOX) oxygenate
fatty acids into 2R-hydroperoxides. They may be involved
in the hypersensitive reaction, rapid and localized cell
death induced by infection with pathogens, and the
rapidly induced expression of PIOX may be caused by the
oxidative burst that occurs in the process of cell
death.
Length = 484
Score = 63.1 bits (154), Expect = 7e-11
Identities = 41/109 (37%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
Query: 232 QPFEDWWEDFNINN----KLKTNHPPFQYD---PHGD--DLTAIGIQRQRDYGMPGYNEF 282
F D F I + L N+P F D P G DL AI I R R+ G+P YNEF
Sbjct: 303 LGFADLLYSFGITHPGALTLH-NYPRFLRDLHRPDGRVIDLAAIDILRDRERGVPRYNEF 361
Query: 283 RKYAGLKPVKSFEELSDVIGPENIHLLKLGY-KHVDDIDLFVGGYLENP 330
R+ L P KSFE+L+ E L+ Y V+ +DL VG E
Sbjct: 362 RRLLHLPPAKSFEDLTG--DEEVAAELREVYGGDVEKVDLLVGLLAEPL 408
Score = 53.8 bits (130), Expect = 7e-08
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 21/119 (17%)
Query: 52 PIQHVIDLTHFLDVSPVYGSTRKIAEKLRLF-KGGLLKGQHVGGKEYPPNYGRPKSKCDI 110
P ++ TH+ D S +YGST + ++LR F G LK + P
Sbjct: 83 PPTYINTNTHWWDGSQIYGSTEEAQKRLRTFPPDGKLK---LDADGLLPV---------- 129
Query: 111 QPDEPAVCYFAGDSRANQNSF--LTPLQVLFLRLHNILAREFAKINHHWDDERLYQEAR 167
DE G N N + L+ L LF+R HN + K W DE+L+ +AR
Sbjct: 130 --DEHTGLPLTGF---NDNWWVGLSLLHTLFVREHNAICDALRKEYPDWSDEQLFDKAR 183
>gnl|CDD|188651 cd09819, An_peroxidase_bacterial_1, Uncharacterized bacterial
family of heme peroxidases. Animal heme peroxidases are
diverse family of enzymes which are not restricted to
metazoans; members are also found in fungi, and plants,
and in bacteria - like this family of uncharacterized
proteins.
Length = 465
Score = 57.7 bits (140), Expect = 4e-09
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 122 GDSRANQNSFLTPLQVLFLRLHNILAREFAKINHHWDDERLYQEARKTVIGIYQWITYEE 181
GD R ++N + L + FLR HN + H + L++EAR+ V YQW+ +
Sbjct: 147 GDPRNDENLIVAQLHLAFLRFHNAVVDALRA--HGTPGDELFEEARRLVRWHYQWLVLND 204
Query: 182 MLPVLID 188
LP + D
Sbjct: 205 FLPRICD 211
>gnl|CDD|188649 cd09817, linoleate_diol_synthase_like, Linoleate (8R)-dioxygenase
and related enzymes. These fungal enzymes, related to
animal heme peroxidases, catalyze the oxygenation of
linoleate and similar targets. Linoleate
(8R)-dioxygenase, also called linoleate:oxygen
7S,8S-oxidoreductase, generates
(9Z,12Z)-(7S,8S)-dihydroxyoctadeca-9,12-dienoate as a
product. Other members are 5,8-linoleate dioxygenase
(LDS, ppoA) and linoleate 10R-dioxygenase (ppoC),
involved in the biosynthesis of oxylipins.
Length = 550
Score = 54.3 bits (131), Expect = 5e-08
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 262 DLTAIGIQRQRDYGMPGYNEFRKYAGLKPVKSFEELSDVIGPENIHLLKLGYKHVDDIDL 321
+ +GI + R++ + NEFRK+ GLKP ++FE+++ PE L+L Y H D+++L
Sbjct: 374 VIEILGILQAREWNVATLNEFRKFFGLKPYETFEDINS--DPEVAEALELLYGHPDNVEL 431
Query: 322 FVGGYLEN----PLHDSLFGPTFT--YVI---ADQFYRWKFGDRF 357
+ G E+ S P +T I A R GDRF
Sbjct: 432 YPGLVAEDAKPPMPPGSGLCPGYTISRAILSDAVALVR---GDRF 473
Score = 36.5 bits (85), Expect = 0.020
Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 53/134 (39%)
Query: 62 FLDVSPVYGSTRKIAEKLRLFKGGLLKGQHVGGKEYPPNYGRPKSKCDI----QPDEPAV 117
+LD+SP+YGS ++ K+R K G LK P + D QP P V
Sbjct: 123 YLDLSPLYGSNQEEQNKVRTMKDGKLK---------------PDTFSDKRLLGQP--PGV 165
Query: 118 CYFAGDSRANQNSFLTPLQVLFLRLHNILAREFAKIN-----------------HHWDDE 160
C V+F R HN + + A+IN DE
Sbjct: 166 CALL---------------VMFNRFHNYVVEQLAQINEGGRFTPPGDKLDSSAKEEKLDE 210
Query: 161 RLYQEARKTVIGIY 174
L+Q AR G+Y
Sbjct: 211 DLFQTARLITCGLY 224
>gnl|CDD|188653 cd09821, An_peroxidase_bacterial_2, Uncharacterized bacterial
family of heme peroxidases. Animal heme peroxidases are
diverse family of enzymes which are not restricted to
metazoans; members are also found in fungi, and plants,
and in bacteria - like this family of uncharacterized
proteins.
Length = 570
Score = 48.2 bits (115), Expect = 5e-06
Identities = 36/105 (34%), Positives = 43/105 (40%), Gaps = 19/105 (18%)
Query: 93 GGKEYPPNYGRPKSKCDIQPDEPAVCYFAGDSRANQNSFLTPLQVLFLRLHNIL------ 146
E PP G P S + D V AGD R N+N LT + +F R HN L
Sbjct: 155 NPTEDPPGPGAPGSYDNELLDAHFV---AGDGRVNENIGLTAVHTVFHREHNRLVDQIKD 211
Query: 147 ----------AREFAKINHHWDDERLYQEARKTVIGIYQWITYEE 181
A E N WD ERL+Q AR YQ + +EE
Sbjct: 212 TLLQSADLAFANEAGGNNLAWDGERLFQAARFANEMQYQHLVFEE 256
Score = 43.6 bits (103), Expect = 1e-04
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 14/130 (10%)
Query: 233 PFEDWWEDFNINNKLKTNHPPF--QYDPHGDDLTAIGIQRQRDYGMPGYNEFRKYAGLKP 290
P+E W DF K + F Y H A + +R G
Sbjct: 409 PYESW-NDFGARLKNPESLINFIAAYGTHLTITGATTLAAKRAAAQD---LVDGGDGAPA 464
Query: 291 VKSFEELSDVIGPENIHLLKLGYKHVDDIDLFVGGYLENPLHD-SLFGPTFTYVIADQFY 349
++ + G K +D++DL+VGG E + + G TF +V +Q
Sbjct: 465 DRADFMNAAGAGAG-------TVKGLDNVDLWVGGLAEKQVPFGGMLGSTFNFVFEEQMD 517
Query: 350 RWKFGDRFWF 359
R + GDRF++
Sbjct: 518 RLQDGDRFYY 527
Score = 32.0 bits (73), Expect = 0.49
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 262 DLTAIGIQRQRDYGMPGYNEFR 283
DL A+ I R RD G+P NE R
Sbjct: 373 DLAALNIARGRDTGLPTLNEAR 394
>gnl|CDD|177921 PLN02283, PLN02283, alpha-dioxygenase.
Length = 633
Score = 45.9 bits (109), Expect = 2e-05
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 60 THFLDVSPVYGSTRKIAEKLRLFKGGLLKGQHVGGKEYPPNYGRPKSKCDIQPDEPAVCY 119
T + D S +YGS K ++R FK G LK G + + G P S
Sbjct: 211 TPWWDGSVIYGSNEKGLRRVRTFKDGKLKISEDGLLLHDED-GIPIS------------- 256
Query: 120 FAGDSRANQNSFLTPLQVLFLRLHNILAREFAKINHHWDDERLYQEAR 167
GD R N + ++ LQ LF++ HN + + +DDE LY+ AR
Sbjct: 257 --GDVR-NSWAGVSLLQALFVKEHNAVCDALKEEYPDFDDEELYRHAR 301
Score = 44.8 bits (106), Expect = 6e-05
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 258 PHGDDLTAIGIQRQRDYGMPGYNEFRKYAGLKPVKSFEELSDVIGPENIHLLKLGY-KHV 316
P D+ A+ I R R+ G+ YNEFR+ + P+ +E+L+D E I +L+ Y V
Sbjct: 468 PDHVDMAALEIYRDRERGVARYNEFRRNLLMIPISKWEDLTD--DEEAIEVLREVYGDDV 525
Query: 317 DDIDLFVG 324
+ +DL VG
Sbjct: 526 EKLDLLVG 533
>gnl|CDD|225158 COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug
activity B) [General function prediction only].
Length = 189
Score = 27.6 bits (62), Expect = 9.3
Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 16/103 (15%)
Query: 208 WMHRPSIVQGYLDHLLEGQQTQFIQPFEDWWEDFNINNK-----LKTNHPPFQYDPHGDD 262
W P++++G++D + F + + K + T P Y G +
Sbjct: 79 WYSMPALLKGWIDRVF---TPGFAYGAGGYGSGGLLQGKKAMLVVTTGAPEEAYREGGGN 135
Query: 263 LTAIGIQRQRDYGMPGYNEFRKYAGLKPVKSFEEL-SDVIGPE 304
G+ YG Y GL + F +DVI E
Sbjct: 136 FF-EGVLLDPLYGT------FHYCGLGWLPPFTFYGADVIDDE 171
>gnl|CDD|180606 PRK06525, PRK06525, hydrogenase 4 subunit D; Validated.
Length = 479
Score = 28.0 bits (63), Expect = 9.4
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Query: 192 MMIAKSGKAAQIDMVTW----MHRPSIVQGYL 219
++ A GK+AQ+ +W M P+ YL
Sbjct: 213 ILFAAWGKSAQLPFYSWLPDAMEAPTPASAYL 244
>gnl|CDD|151976 pfam11539, DUF3228, Protein of unknown function (DUF3228). This
family of proteins has no known function.
Length = 196
Score = 27.4 bits (61), Expect = 9.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 277 PGYNEFRKYAGLKPVKSFEELSDVIGPENIHLLKLGYK 314
GY F K+ L+ + I EN HLLK GY+
Sbjct: 47 DGYAPFCKHLFLENFTEATCGTLEITNENEHLLKTGYE 84
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.323 0.142 0.460
Gapped
Lambda K H
0.267 0.0683 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 20,447,573
Number of extensions: 2032951
Number of successful extensions: 1407
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1380
Number of HSP's successfully gapped: 35
Length of query: 380
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 281
Effective length of database: 6,546,556
Effective search space: 1839582236
Effective search space used: 1839582236
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.0 bits)