Psyllid ID: psy7471

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------
Protein Sequence
MENRSDGEKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKLS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccEEEEEccccEEEEEEEccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccEEcccccccEEEcccccEEEEEcccccccccccccccEEEcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccEEEcccccEEHEEEcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEEEccccccHccccHHHHHHHHccc
Coil and Loop (DISEMBL)
menrsdgektsgggsgrgssggdrkvgleDFHFIKVlgkgsfgkelfghyrsitnDTNSILRFLLLLLCAGDACLTFLHrhgvvyrdlkLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKLS
Flexible Loop (DISEMBL)
menrsdgektsgggsgrgssggdrkVGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKLS
Low Complexity Region (SEG)
MENRSDGEKTsgggsgrgssggDRKVGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFlllllCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKLS
Disordered region (IsUnstruct)
*************************VGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVK**
Disordered Region (DISOPRED)
***********************RKVGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKL*
Disordered Region (DISEMBL)
**********************DRKVGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKLS
Disordered Region (DISPRO)
*********************GDRKVGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKLS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MENRSDGEKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKLS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	127	2.2.26 [Sep-21-2011]
P43057	1097	Protein kinase C-like 1 O	N/A	N/A	0.803	0.092	0.296	4e-09
Q16975	743	Calcium-independent prote	N/A	N/A	0.346	0.059	0.6	4e-09
P10830	736	Protein kinase C epsilon	yes	N/A	0.291	0.050	0.736	4e-09
P16054	737	Protein kinase C epsilon	yes	N/A	0.291	0.050	0.736	4e-09
Q02156	737	Protein kinase C epsilon	yes	N/A	0.291	0.050	0.736	4e-09
P09216	737	Protein kinase C epsilon	yes	N/A	0.291	0.050	0.736	6e-09
P83099	671	Putative protein kinase C	no	N/A	0.732	0.138	0.290	7e-09
P13678	634	Protein kinase C OS=Droso	no	N/A	0.275	0.055	0.75	4e-08
P05130	679	Protein kinase C, brain i	no	N/A	0.362	0.067	0.557	7e-08
Q05655	676	Protein kinase C delta ty	no	N/A	0.692	0.130	0.312	1e-07

>sp|P43057|KPC1_CANAX Protein kinase C-like 1 OS=Candida albicans GN=PKC1 PE=3 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 51/172 (29%), Positives = 66/172 (38%), Gaps = 70/172 (40%)

Query: 8   EKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------------- 52
           ++T   G    S    RKVGL+DF F+ VLGKG+FGK +    R                
Sbjct: 747 QRTHSSGKSGKSKRRKRKVGLDDFQFLAVLGKGNFGKVMLAESRHTSKLCAIKVLKKDFI 806

Query: 53  ITNDTNSILR---------------FLLLLLC----------------AGD--------- 72
           + ND    ++               FLL L C                 GD         
Sbjct: 807 VENDEAESVKSEKRVFLTANKEMHPFLLNLHCCFQTENRIYFVMEYISGGDLMWHIQKNR 866

Query: 73  ---------AC-----LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
                    AC     L + H +G+VYRDLKLDNILL   G  +K+ D+G C
Sbjct: 867 FTAKRAKFYACEVLLGLKYFHDNGIVYRDLKLDNILLTTKGH-IKIGDYGLC 917

Necessary for osmotic stability.
Candida albicans (taxid: 5476)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 3

>sp|Q16975|KPC2_APLCA Calcium-independent protein kinase C OS=Aplysia californica GN=PRKC2 PE=1 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 34/50 (68%), Gaps = 6/50 (12%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           L FLHRHG++YRDLKLDNILLDA G   K+ADFG C       K  + FC
Sbjct: 515 LMFLHRHGIIYRDLKLDNILLDAEGH-CKIADFGMCKEGMTENKLTQTFC 563

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Aplysia californica (taxid: 6500)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P10830|KPCE_RABIT Protein kinase C epsilon type OS=Oryctolagus cuniculus GN=PRKCE PE=2 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 1/38 (2%)

Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct: 517 SALMFLHQHGVIYRDLKLDNILLDAEGH-CKLADFGMC 553

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays essential roles in the regulation of multiple cellular processes linked to cytoskeletal proteins, such as cell adhesion, motility, migration and cell cycle, functions in neuron growth and ion channel regulation, and is involved in immune response, cancer cell invasion and regulation of apoptosis. Mediates cell adhesion to the extracellular matrix via integrin-dependent signaling, by mediating angiotensin-2-induced activation of integrin beta-1 (ITGB1) in cardiac fibroblasts. Phosphorylates MARCKS, which phosphorylates and activates PTK2/FAK, leading to the spread of cardiomyocytes. Involved in the control of the directional transport of ITGB1 in mesenchymal cells by phosphorylating vimentin (VIM), an intermediate filament (IF) protein. In epithelial cells, associates with and phosphorylates keratin-8 (KRT8), which induces targeting of desmoplakin at desmosomes and regulates cell-cell contact. Phosphorylates IQGAP1, which binds to CDC42, mediating epithelial cell-cell detachment prior to migration. During cytokinesis, forms a complex with YWHAB, which is crucial for daughter cell separation, and facilitates abscission by a mechanism which may implicate the regulation of RHOA. In cardiac myocytes, regulates myofilament function and excitation coupling at the Z-lines, where it is indirectly associated with F-actin via interaction with COPB1. During endothelin-induced cardiomyocyte hypertrophy, mediates activation of PTK2/FAK, which is critical for cardiomyocyte survival and regulation of sarcomere length. Plays a role in the pathogenesis of dilated cardiomyopathy via persistent phosphorylation of troponin I (TNNI3). Involved in nerve growth factor (NFG)-induced neurite outgrowth and neuron morphological change independently of its kinase activity, by inhibition of RHOA pathway, activation of CDC42 and cytoskeletal rearrangement. May be involved in presynaptic facilitation by mediating phorbol ester-induced synaptic potentiation. Phosphorylates gamma-aminobutyric acid receptor subunit gamma-2 (GABRG2), which reduces the response of GABA receptors to ethanol and benzodiazepines and may mediate acute tolerance to the intoxicating effects of ethanol. Upon PMA treatment, phosphorylates the capsaicin- and heat-activated cation channel TRPV1, which is required for bradykinin-induced sensitization of the heat response in nociceptive neurons. Is able to form a complex with PDLIM5 and N-type calcium channel, and may enhance channel activities and potentiates fast synaptic transmission by phosphorylating the pore-forming alpha subunit CACNA1B (CaV2.2). Downstream of TLR4, plays an important role in the lipopolysaccharide (LPS)-induced immune response by phosphorylating and activating TICAM2/TRAM, which in turn activates the transcription factor IRF3 and subsequent cytokines production. In differentiating erythroid progenitors, is regulated by EPO and controls the protection against the TNFSF10/TRAIL-mediated apoptosis, via BCL2. May be involved in the regulation of the insulin-induced phosphorylation and activation of AKT1.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P16054|KPCE_MOUSE Protein kinase C epsilon type OS=Mus musculus GN=Prkce PE=1 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 1/38 (2%)

Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct: 518 SALMFLHQHGVIYRDLKLDNILLDAEGH-CKLADFGMC 554

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays essential roles in the regulation of multiple cellular processes linked to cytoskeletal proteins, such as cell adhesion, motility, migration and cell cycle, functions in neuron growth and ion channel regulation, and is involved in immune response, cancer cell invasion and regulation of apoptosis. Mediates cell adhesion to the extracellular matrix via integrin-dependent signaling, by mediating angiotensin-2-induced activation of integrin beta-1 (ITGB1) in cardiac fibroblasts. Phosphorylates MARCKS, which phosphorylates and activates PTK2/FAK, leading to the spread of cardiomyocytes. Involved in the control of the directional transport of ITGB1 in mesenchymal cells by phosphorylating vimentin (VIM), an intermediate filament (IF) protein. In epithelial cells, associates with and phosphorylates keratin-8 (KRT8), which induces targeting of desmoplakin at desmosomes and regulates cell-cell contact. Phosphorylates IQGAP1, which binds to CDC42, mediating epithelial cell-cell detachment prior to migration. During cytokinesis, forms a complex with YWHAB, which is crucial for daughter cell separation, and facilitates abscission by a mechanism which may implicate the regulation of RHOA. In cardiac myocytes, regulates myofilament function and excitation coupling at the Z-lines, where it is indirectly associated with F-actin via interaction with COPB1. During endothelin-induced cardiomyocyte hypertrophy, mediates activation of PTK2/FAK, which is critical for cardiomyocyte survival and regulation of sarcomere length. Plays a role in the pathogenesis of dilated cardiomyopathy via persistent phosphorylation of troponin I (TNNI3). Involved in nerve growth factor (NFG)-induced neurite outgrowth and neuron morphological change independently of its kinase activity, by inhibition of RHOA pathway, activation of CDC42 and cytoskeletal rearrangement. May be involved in presynaptic facilitation by mediating phorbol ester-induced synaptic potentiation. Phosphorylates gamma-aminobutyric acid receptor subunit gamma-2 (GABRG2), which reduces the response of GABA receptors to ethanol and benzodiazepines and may mediate acute tolerance to the intoxicating effects of ethanol. Upon PMA treatment, phosphorylates the capsaicin- and heat-activated cation channel TRPV1, which is required for bradykinin-induced sensitization of the heat response in nociceptive neurons. Is able to form a complex with PDLIM5 and N-type calcium channel, and may enhance channel activities and potentiates fast synaptic transmission by phosphorylating the pore-forming alpha subunit CACNA1B (CaV2.2). Downstream of TLR4, plays an important role in the lipopolysaccharide (LPS)-induced immune response by phosphorylating and activating TICAM2/TRAM, which in turn activates the transcription factor IRF3 and subsequent cytokines production. In differentiating erythroid progenitors, is regulated by EPO and controls the protection against the TNFSF10/TRAIL-mediated apoptosis, via BCL2. May be involved in the regulation of the insulin-induced phosphorylation and activation of AKT1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q02156|KPCE_HUMAN Protein kinase C epsilon type OS=Homo sapiens GN=PRKCE PE=1 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 1/38 (2%)

Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct: 518 SALMFLHQHGVIYRDLKLDNILLDAEGH-CKLADFGMC 554

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays essential roles in the regulation of multiple cellular processes linked to cytoskeletal proteins, such as cell adhesion, motility, migration and cell cycle, functions in neuron growth and ion channel regulation, and is involved in immune response, cancer cell invasion and regulation of apoptosis. Mediates cell adhesion to the extracellular matrix via integrin-dependent signaling, by mediating angiotensin-2-induced activation of integrin beta-1 (ITGB1) in cardiac fibroblasts. Phosphorylates MARCKS, which phosphorylates and activates PTK2/FAK, leading to the spread of cardiomyocytes. Involved in the control of the directional transport of ITGB1 in mesenchymal cells by phosphorylating vimentin (VIM), an intermediate filament (IF) protein. In epithelial cells, associates with and phosphorylates keratin-8 (KRT8), which induces targeting of desmoplakin at desmosomes and regulates cell-cell contact. Phosphorylates IQGAP1, which binds to CDC42, mediating epithelial cell-cell detachment prior to migration. In HeLa cells, contributes to hepatocyte growth factor (HGF)-induced cell migration, and in human corneal epithelial cells, plays a critical role in wound healing after activation by HGF. During cytokinesis, forms a complex with YWHAB, which is crucial for daughter cell separation, and facilitates abscission by a mechanism which may implicate the regulation of RHOA. In cardiac myocytes, regulates myofilament function and excitation coupling at the Z-lines, where it is indirectly associated with F-actin via interaction with COPB1. During endothelin-induced cardiomyocyte hypertrophy, mediates activation of PTK2/FAK, which is critical for cardiomyocyte survival and regulation of sarcomere length. Plays a role in the pathogenesis of dilated cardiomyopathy via persistent phosphorylation of troponin I (TNNI3). Involved in nerve growth factor (NFG)-induced neurite outgrowth and neuron morphological change independently of its kinase activity, by inhibition of RHOA pathway, activation of CDC42 and cytoskeletal rearrangement. May be involved in presynaptic facilitation by mediating phorbol ester-induced synaptic potentiation. Phosphorylates gamma-aminobutyric acid receptor subunit gamma-2 (GABRG2), which reduces the response of GABA receptors to ethanol and benzodiazepines and may mediate acute tolerance to the intoxicating effects of ethanol. Upon PMA treatment, phosphorylates the capsaicin- and heat-activated cation channel TRPV1, which is required for bradykinin-induced sensitization of the heat response in nociceptive neurons. Is able to form a complex with PDLIM5 and N-type calcium channel, and may enhance channel activities and potentiates fast synaptic transmission by phosphorylating the pore-forming alpha subunit CACNA1B (CaV2.2). In prostate cancer cells, interacts with and phosphorylates STAT3, which increases DNA-binding and transcriptional activity of STAT3 and seems to be essential for prostate cancer cell invasion. Downstream of TLR4, plays an important role in the lipopolysaccharide (LPS)-induced immune response by phosphorylating and activating TICAM2/TRAM, which in turn activates the transcription factor IRF3 and subsequent cytokines production. In differentiating erythroid progenitors, is regulated by EPO and controls the protection against the TNFSF10/TRAIL-mediated apoptosis, via BCL2. May be involved in the regulation of the insulin-induced phosphorylation and activation of AKT1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P09216|KPCE_RAT Protein kinase C epsilon type OS=Rattus norvegicus GN=Prkce PE=1 SV=1

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 1/38 (2%)

Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct: 518 SALMFLHQHGVIYRDLKLDNILLDAEGH-SKLADFGMC 554

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays essential roles in the regulation of multiple cellular processes linked to cytoskeletal proteins, such as cell adhesion, motility, migration and cell cycle, functions in neuron growth and ion channel regulation, and is involved in immune response, cancer cell invasion and regulation of apoptosis. Mediates cell adhesion to the extracellular matrix via integrin-dependent signaling, by mediating angiotensin-2-induced activation of integrin beta-1 (ITGB1) in cardiac fibroblasts. Phosphorylates MARCKS, which phosphorylates and activates PTK2/FAK, leading to the spread of cardiomyocytes. Involved in the control of the directional transport of ITGB1 in mesenchymal cells by phosphorylating vimentin (VIM), an intermediate filament (IF) protein. In epithelial cells, associates with and phosphorylates keratin-8 (KRT8), which induces targeting of desmoplakin at desmosomes and regulates cell-cell contact. Phosphorylates IQGAP1, which binds to CDC42, mediating epithelial cell-cell detachment prior to migration. During cytokinesis, forms a complex with YWHAB, which is crucial for daughter cell separation, and facilitates abscission by a mechanism which may implicate the regulation of RHOA. In cardiac myocytes, regulates myofilament function and excitation coupling at the Z-lines, where it is indirectly associated with F-actin via interaction with COPB1. During endothelin-induced cardiomyocyte hypertrophy, mediates activation of PTK2/FAK, which is critical for cardiomyocyte survival and regulation of sarcomere length. Plays a role in the pathogenesis of dilated cardiomyopathy via persistent phosphorylation of troponin I (TNNI3). Involved in nerve growth factor (NFG)-induced neurite outgrowth and neuron morphological change independently of its kinase activity, by inhibition of RHOA pathway, activation of CDC42 and cytoskeletal rearrangement. May be involved in presynaptic facilitation by mediating phorbol ester-induced synaptic potentiation. Phosphorylates gamma-aminobutyric acid receptor subunit gamma-2 (GABRG2), which reduces the response of GABA receptors to ethanol and benzodiazepines and may mediate acute tolerance to the intoxicating effects of ethanol. Upon PMA treatment, phosphorylates the capsaicin- and heat-activated cation channel TRPV1, which is required for bradykinin-induced sensitization of the heat response in nociceptive neurons. Is able to form a complex with PDLIM5 and N-type calcium channel, and may enhance channel activities and potentiates fast synaptic transmission by phosphorylating the pore-forming alpha subunit CACNA1B (CaV2.2). Downstream of TLR4, plays an important role in the lipopolysaccharide (LPS)-induced immune response by phosphorylating and activating TICAM2/TRAM, which in turn activates the transcription factor IRF3 and subsequent cytokines production. In differentiating erythroid progenitors, is regulated by EPO and controls the protection against the TNFSF10/TRAIL-mediated apoptosis, via BCL2. May be involved in the regulation of the insulin-induced phosphorylation and activation of AKT1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P83099|KPC4_DROME Putative protein kinase C delta type homolog OS=Drosophila melanogaster GN=Pkcdelta PE=2 SV=3

 Score = 59.3 bits (142), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 72/165 (43%)

Query: 24  RKVGLEDFHFIKVLGKGSFGKELFG------HYRSI------------------------ 53
           +   ++DFHF+ VLGKGSFGK L        +Y +I                        
Sbjct: 336 KNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVL 395

Query: 54  --------------TNDTNSILRFLLLLLCAGD------------------------ACL 75
                         T  T S L F++  L  GD                        + L
Sbjct: 396 ALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGL 455

Query: 76  TFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCD 120
            FLH+ G++YRDLKLDN+LLD  G  +++ADFG C   K++++ D
Sbjct: 456 KFLHKKGIIYRDLKLDNVLLDYEGH-VRIADFGMC---KLQIYLD 496

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P13678|KPC3_DROME Protein kinase C OS=Drosophila melanogaster GN=Pkc98E PE=2 SV=1

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/36 (75%), Positives = 28/36 (77%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FLH HGV+YRDLKLDNILLD  G   KLADFG C
Sbjct: 415 LQFLHTHGVIYRDLKLDNILLDQEGH-CKLADFGMC 449

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P05130|KPC1_DROME Protein kinase C, brain isozyme OS=Drosophila melanogaster GN=Pkc53E PE=2 SV=2

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 6/52 (11%)

Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           A L FLH  G++YRDLKLDN+LLDA G  +K+ADFG C       K  K FC
Sbjct: 460 AGLFFLHTKGILYRDLKLDNVLLDADGH-VKIADFGMCKENIVGDKTTKTFC 510

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q05655|KPCD_HUMAN Protein kinase C delta type OS=Homo sapiens GN=PRKCD PE=1 SV=2

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/157 (31%), Positives = 59/157 (37%), Gaps = 69/157 (43%)

Query: 22  GDRKVGLEDFHFIKVLGKGSFGKELF------GHYRSI---------------------- 53
           G  K  + +F F KVLGKGSFGK L       G Y +I                      
Sbjct: 340 GSSKCNINNFIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLIDDDVECTMVEKR 399

Query: 54  ----------------TNDTNSILRFLLLLLCAGD-----------------------AC 74
                           T  T   L F++  L  GD                        C
Sbjct: 400 VLTLAAENPFLTHLICTFQTKDHLFFVMEFLNGGDLMYHIQDKGRFELYRATFYAAEIMC 459

Query: 75  -LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
            L FLH  G++YRDLKLDN+LLD  G  +K+ADFG C
Sbjct: 460 GLQFLHSKGIIYRDLKLDNVLLDRDGH-IKIADFGMC 495

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays contrasting roles in cell death and cell survival by functioning as a pro-apoptotic protein during DNA damage-induced apoptosis, but acting as an anti-apoptotic protein during cytokine receptor-initiated cell death, is involved in tumor suppression as well as survival of several cancers, is required for oxygen radical production by NADPH oxidase and acts as positive or negative regulator in platelet functional responses. Upon DNA damage, activates the promoter of the death-promoting transcription factor BCLAF1/Btf to trigger BCLAF1-mediated p53/TP53 gene transcription and apoptosis. In response to oxidative stress, interact with and activate CHUK/IKKA in the nucleus, causing the phosphorylation of p53/TP53. In the case of ER stress or DNA damage-induced apoptosis, can form a complex with the tyrosine-protein kinase ABL1 which trigger apoptosis independently of p53/TP53. In cytosol can trigger apoptosis by activating MAPK11 or MAPK14, inhibiting AKT1 and decreasing the level of X-linked inhibitor of apoptosis protein (XIAP), whereas in nucleus induces apoptosis via the activation of MAPK8 or MAPK9. Upon ionizing radiation treatment, is required for the activation of the apoptosis regulators BAX and BAK, which trigger the mitochondrial cell death pathway. Can phosphorylate MCL1 and target it for degradation which is sufficient to trigger for BAX activation and apoptosis. Is required for the control of cell cycle progression both at G1/S and G2/M phases. Mediates phorbol 12-myristate 13-acetate (PMA)-induced inhibition of cell cycle progression at G1/S phase by up-regulating the CDK inhibitor CDKN1A/p21 and inhibiting the cyclin CCNA2 promoter activity. In response to UV irradiation can phosphorylate CDK1, which is important for the G2/M DNA damage checkpoint activation. Can protect glioma cells from the apoptosis induced by TNFSF10/TRAIL, probably by inducing increased phosphorylation and subsequent activation of AKT1. Is highly expressed in a number of cancer cells and promotes cell survival and resistance against chemotherapeutic drugs by inducing cyclin D1 (CCND1) and hyperphosphorylation of RB1, and via several pro-survival pathways, including NF-kappa-B, AKT1 and MAPK1/3 (ERK1/2). Can also act as tumor suppressor upon mitogenic stimulation with PMA or TPA. In N-formyl-methionyl-leucyl-phenylalanine (fMLP)-treated cells, is required for NCF1 (p47-phox) phosphorylation and activation of NADPH oxidase activity, and regulates TNF-elicited superoxide anion production in neutrophils, by direct phosphorylation and activation of NCF1 or indirectly through MAPK1/3 (ERK1/2) signaling pathways. May also play a role in the regulation of NADPH oxidase activity in eosinophil after stimulation with IL5, leukotriene B4 or PMA. In collagen-induced platelet aggregation, acts a negative regulator of filopodia formation and actin polymerization by interacting with and negatively regulating VASP phosphorylation. Downstream of PAR1, PAR4 and CD36/GP4 receptors, regulates differentially platelet dense granule secretion; acts as a positive regulator in PAR-mediated granule secretion, whereas it negatively regulates CD36/GP4-mediated granule release. Phosphorylates MUC1 in the C-terminal and regulates the interaction between MUC1 and beta-catenin.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
270013506	586	hypothetical protein TcasGA2_TC012107 [T	0.732	0.158	0.333	2e-09
189240860	628	PREDICTED: similar to Putative protein k	0.732	0.148	0.333	2e-09
312383595	578	hypothetical protein AND_03218 [Anophele	0.874	0.192	0.299	9e-09
193647911	522	PREDICTED: RAC serine/threonine-protein	0.866	0.210	0.316	9e-09
357625870	1494	hypothetical protein KGM_16634 [Danaus p	0.732	0.062	0.303	9e-09
242012896	528	RAC protein kinase DRAC-PK85, putative [	0.866	0.208	0.311	1e-08
328712297	508	PREDICTED: RAC serine/threonine-protein	0.866	0.216	0.316	1e-08
328701790	942	PREDICTED: hypothetical protein LOC10016	0.732	0.098	0.309	1e-08
307209804	394	Putative protein kinase C delta type-lik	0.732	0.236	0.303	1e-08
312378785	2199	hypothetical protein AND_09568 [Anophele	0.748	0.043	0.314	1e-08

>gi|270013506|gb|EFA09954.1| hypothetical protein TcasGA2_TC012107 [Tribolium castaneum]

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/165 (33%), Positives = 70/165 (42%), Gaps = 72/165 (43%)

Query: 24  RKVGLEDFHFIKVLGKGSFGKELFG------HYRSI------------------------ 53
           RK G+EDF+F+KVLGKGSFGK L        +Y +I                        
Sbjct: 251 RKYGVEDFNFLKVLGKGSFGKVLLAELKNTEYYYAIKCLKKDVVLEDDDVECTLIERKVL 310

Query: 54  --------------TNDTNSILRFLLLLLCAGD------------------------ACL 75
                         T  T S L F++  L  GD                        + L
Sbjct: 311 ALATKHPYLCHLLCTFQTESHLFFVMEYLNGGDLMFHIQKSGRFPEAQARFYGAEIVSGL 370

Query: 76  TFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCD 120
            FLH  G+VYRDLKLDNILLD  G  +++ADFG C   K+++F D
Sbjct: 371 KFLHNKGIVYRDLKLDNILLDFDGH-VRIADFGMC---KLQIFLD 411

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189240860|ref|XP_969570.2| PREDICTED: similar to Putative protein kinase C delta type homolog [Tribolium castaneum]

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/165 (33%), Positives = 70/165 (42%), Gaps = 72/165 (43%)

Query: 24  RKVGLEDFHFIKVLGKGSFGKELFG------HYRSI------------------------ 53
           RK G+EDF+F+KVLGKGSFGK L        +Y +I                        
Sbjct: 293 RKYGVEDFNFLKVLGKGSFGKVLLAELKNTEYYYAIKCLKKDVVLEDDDVECTLIERKVL 352

Query: 54  --------------TNDTNSILRFLLLLLCAGD------------------------ACL 75
                         T  T S L F++  L  GD                        + L
Sbjct: 353 ALATKHPYLCHLLCTFQTESHLFFVMEYLNGGDLMFHIQKSGRFPEAQARFYGAEIVSGL 412

Query: 76  TFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCD 120
            FLH  G+VYRDLKLDNILLD  G  +++ADFG C   K+++F D
Sbjct: 413 KFLHNKGIVYRDLKLDNILLDFDGH-VRIADFGMC---KLQIFLD 453

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312383595|gb|EFR28627.1| hypothetical protein AND_03218 [Anopheles darlingi]

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 70/167 (41%), Gaps = 56/167 (33%)

Query: 8   EKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRSI-------------- 53
           EK    G+      G  KV LE+F F+KVLGKG+FGK +    +S               
Sbjct: 207 EKIPVYGTSTDKISGKMKVTLENFEFLKVLGKGTFGKVILCREKSTAKLYAIKILKKDVI 266

Query: 54  --------TNDTNSILRF----LLLLLCAGD------------------------ACLTF 77
                   T   N +L+      L+ +  G+                        + L +
Sbjct: 267 IQKDEVAHTMAENRVLKTTNHPFLIYVNGGELFFHLSRERIFPEDRTRFYAAEIISALGY 326

Query: 78  LHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           LH HG++YRDLKL+N+LLD  G  +K+ADFG C       +  K FC
Sbjct: 327 LHSHGIIYRDLKLENLLLDKDGH-IKIADFGLCKEDITYGRTTKTFC 372

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193647911|ref|XP_001951736.1| PREDICTED: RAC serine/threonine-protein kinase-like isoform 1 [Acyrthosiphon pisum]

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 58/183 (31%), Positives = 75/183 (40%), Gaps = 73/183 (39%)

Query: 9   KTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKELF------GHYRSI--------- 53
           K S  G+    S G RKV LE+F F+KVLGKG+FGK +       GH  +I         
Sbjct: 155 KFSVQGTSSSKSTGKRKVTLENFEFLKVLGKGTFGKVILCREKATGHLYAIKILKKEVII 214

Query: 54  -------TNDTNSILR-----FLLLL---------LC-------AGD------------- 72
                  T   N +LR     FL+ L         LC        G+             
Sbjct: 215 QKDEVAHTLTENRVLRTTSHPFLISLKYSFQTADRLCFVMEYVNGGELFFHLSRERVFTE 274

Query: 73  -----------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIK 116
                      + L +LH  G++YRDLKL+N+LLD  G  +K+ADFG C          K
Sbjct: 275 DRTRFYGAEIISALGYLHSQGIIYRDLKLENLLLDKDGH-IKIADFGLCKEDITYGSTTK 333

Query: 117 LFC 119
            FC
Sbjct: 334 TFC 336

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357625870|gb|EHJ76160.1| hypothetical protein KGM_16634 [Danaus plexippus]

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 67/165 (40%), Gaps = 72/165 (43%)

Query: 24   RKVGLEDFHFIKVLGKGSFGKELFGHYRSI------------------------------ 53
            RK  ++DF FI+VLGKGSFGK +    R                                
Sbjct: 1159 RKYTIDDFQFIRVLGKGSFGKVMLAELRDTEYYYAVKCLKKDVVLEDDDVECTLIERKVL 1218

Query: 54   --------------TNDTNSILRFLLLLLCAGD------------------------ACL 75
                          T  T+S L F++  L  GD                        + L
Sbjct: 1219 ALGTNHPYLCHLFATFQTDSHLFFVMEYLNGGDLMFHIQQSGRFPEARARLYAAEIVSGL 1278

Query: 76   TFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCD 120
             FLH+ G+VYRDLKLDNILLD  G  +++ADFG C   K++++ D
Sbjct: 1279 KFLHKRGIVYRDLKLDNILLDFDGH-VRIADFGMC---KLQIYLD 1319

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242012896|ref|XP_002427161.1| RAC protein kinase DRAC-PK85, putative [Pediculus humanus corporis] gi|212511444|gb|EEB14423.1| RAC protein kinase DRAC-PK85, putative [Pediculus humanus corporis]

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 57/183 (31%), Positives = 76/183 (41%), Gaps = 73/183 (39%)

Query: 9   KTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKELF------GHYRSI--------- 53
           K S  G+    S G +KV LE+F F+KVLGKG+FGK +       GH  +I         
Sbjct: 158 KFSVQGTSHTKSSGKKKVTLENFEFLKVLGKGTFGKVILCREKATGHLYAIKILKKEVII 217

Query: 54  -------TNDTNSILR-----FLLLL---------LC-------AGD------------- 72
                  T   N +LR     FL+ L         LC        G+             
Sbjct: 218 EKDEVAHTLTENRVLRTTNHPFLISLKYAFQTADRLCFVMEYVNGGELFFHLSRERLFGE 277

Query: 73  -----------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIK 116
                      + L +LH  G++YRDLKL+N+LLD  G  +K+ADFG C       +  K
Sbjct: 278 ERTRFYGAEIISALGYLHEQGIIYRDLKLENLLLDNTGH-IKIADFGLCKEDITYGRTTK 336

Query: 117 LFC 119
            FC
Sbjct: 337 TFC 339

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328712297|ref|XP_003244775.1| PREDICTED: RAC serine/threonine-protein kinase-like isoform 2 [Acyrthosiphon pisum]

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 58/183 (31%), Positives = 75/183 (40%), Gaps = 73/183 (39%)

Query: 9   KTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKELF------GHYRSI--------- 53
           K S  G+    S G RKV LE+F F+KVLGKG+FGK +       GH  +I         
Sbjct: 141 KFSVQGTSSSKSTGKRKVTLENFEFLKVLGKGTFGKVILCREKATGHLYAIKILKKEVII 200

Query: 54  -------TNDTNSILR-----FLLLL---------LC-------AGD------------- 72
                  T   N +LR     FL+ L         LC        G+             
Sbjct: 201 QKDEVAHTLTENRVLRTTSHPFLISLKYSFQTADRLCFVMEYVNGGELFFHLSRERVFTE 260

Query: 73  -----------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIK 116
                      + L +LH  G++YRDLKL+N+LLD  G  +K+ADFG C          K
Sbjct: 261 DRTRFYGAEIISALGYLHSQGIIYRDLKLENLLLDKDGH-IKIADFGLCKEDITYGSTTK 319

Query: 117 LFC 119
            FC
Sbjct: 320 TFC 322

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328701790|ref|XP_003241708.1| PREDICTED: hypothetical protein LOC100160218 isoform 2 [Acyrthosiphon pisum] gi|328701792|ref|XP_001945932.2| PREDICTED: hypothetical protein LOC100160218 isoform 1 [Acyrthosiphon pisum]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 70/165 (42%), Gaps = 72/165 (43%)

Query: 24  RKVGLEDFHFIKVLGKGSFGKELFG------HYRSI------------------------ 53
           RK  ++DF+F+KVLGKGSFGK L        +Y ++                        
Sbjct: 605 RKYAVDDFNFLKVLGKGSFGKVLLAELKGTDYYYAVKCLKKDVVLEDDDVECTLIERKVL 664

Query: 54  --------------TNDTNSILRFLLLLLCAGD------------------------ACL 75
                         T  T S L F++  L  GD                        + L
Sbjct: 665 ALGTNHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQQSGRFDEGRSRFYASEIVSGL 724

Query: 76  TFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCD 120
            FLH+ G+VYRDLKLDNILLD  G  +++ADFG C   K++++ D
Sbjct: 725 KFLHKKGIVYRDLKLDNILLDFNGH-VRIADFGMC---KLQIYLD 765

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307209804|gb|EFN86609.1| Putative protein kinase C delta type-like protein [Harpegnathos saltator]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 67/165 (40%), Gaps = 72/165 (43%)

Query: 24  RKVGLEDFHFIKVLGKGSFGKELFGHYRSI------------------------------ 53
           +K  + DF+F+KVLGKGSFGK L    R                                
Sbjct: 65  KKYAVTDFNFLKVLGKGSFGKVLLAELRGTECVYAVKCLKKDVVLEDDDVECTLIERKVL 124

Query: 54  --------------TNDTNSILRFLLLLLCAGD------------------------ACL 75
                         T  T+S L F++  L  GD                        + L
Sbjct: 125 TLATRHPYLCHLFCTFQTDSHLFFVMEYLNGGDLMFHIQKSGRFPEARARFYAAEIWSGL 184

Query: 76  TFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCD 120
            FLH+ G+VYRDLKLDN+LLD  G  +++ADFG C   K+++F D
Sbjct: 185 NFLHKKGIVYRDLKLDNVLLDFDGH-IRIADFGMC---KLQIFLD 225

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312378785|gb|EFR25259.1| hypothetical protein AND_09568 [Anopheles darlingi]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/162 (31%), Positives = 68/162 (41%), Gaps = 67/162 (41%)

Query: 24   RKVGLEDFHFIKVLGKGSFG---------------------------------------K 44
            RK  ++DFHF+ VLGKGSFG                                       K
Sbjct: 1867 RKYNVDDFHFLTVLGKGSFGKLKNSDFYYAIKCLKKDVVLEDDDVDCTLIERKVLALGTK 1926

Query: 45   ELFGHYRSITNDTNSILRFLLLLLCAGD------------------------ACLTFLHR 80
              F  +   T  T+S L F++  L  GD                        + L FLHR
Sbjct: 1927 HPFLCHLFCTFQTDSHLFFVMEYLNGGDLMFHIQQSGRFPEARARFYAAEIVSGLKFLHR 1986

Query: 81   HGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLL 122
             G+VYRDLKLDN+LLD  G  +++ADFG C   K++++ D L
Sbjct: 1987 KGIVYRDLKLDNVLLDYDGH-VRIADFGMC---KLEIYLDKL 2024

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
UNIPROTKB|F1LMV8	546	Prkce "Protein kinase C epsilo	0.291	0.067	0.736	1.2e-15
UNIPROTKB|F1S5K7	600	PRKCE "Uncharacterized protein	0.291	0.061	0.736	1.5e-15
UNIPROTKB|P10830	736	PRKCE "Protein kinase C epsilo	0.291	0.050	0.736	2.7e-15
UNIPROTKB|F1MDC9	737	PRKCE "Uncharacterized protein	0.291	0.050	0.736	2.7e-15
UNIPROTKB|Q02156	737	PRKCE "Protein kinase C epsilo	0.291	0.050	0.736	2.7e-15
MGI|MGI:97599	737	Prkce "protein kinase C, epsil	0.291	0.050	0.736	2.7e-15
RGD|61925	737	Prkce "protein kinase C, epsil	0.291	0.050	0.736	3.5e-15
UNIPROTKB|F1PMX4	737	PRKCE "Uncharacterized protein	0.291	0.050	0.736	5.6e-15
ZFIN|ZDB-GENE-030131-8191	744	prkcea "protein kinase C, epsi	0.291	0.049	0.736	1.2e-14
UNIPROTKB|K7EL10	198	PKN1 "Serine/threonine-protein	0.275	0.176	0.666	1.5e-14

UNIPROTKB|F1LMV8 Prkce "Protein kinase C epsilon type" [Rattus norvegicus (taxid:10116)]

 Score = 141 (54.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query:    73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct:   327 SALMFLHQHGVIYRDLKLDNILLDAEGHC-KLADFGMC 363

GO:0002281 "macrophage activation involved in immune response" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

GO:0010634 "positive regulation of epithelial cell migration" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0030546 "receptor activator activity" evidence=IEA

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0032024 "positive regulation of insulin secretion" evidence=IEA

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0035276 "ethanol binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0035641 "locomotory exploration behavior" evidence=IEA

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0043278 "response to morphine" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0050996 "positive regulation of lipid catabolic process" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=IEA

GO:0070257 "positive regulation of mucus secretion" evidence=IEA

GO:0071361 "cellular response to ethanol" evidence=IEA

GO:0071456 "cellular response to hypoxia" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IEA

GO:0071889 "14-3-3 protein binding" evidence=IEA

GO:0090303 "positive regulation of wound healing" evidence=IEA

GO:2001031 "positive regulation of cellular glucuronidation" evidence=IEA

UNIPROTKB|F1S5K7 PRKCE "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 141 (54.7 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query:    73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct:   381 SALMFLHQHGVIYRDLKLDNILLDAEGHC-KLADFGMC 417

GO:2001031 "positive regulation of cellular glucuronidation" evidence=IEA

GO:0090303 "positive regulation of wound healing" evidence=IEA

GO:0071889 "14-3-3 protein binding" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IEA

GO:0071456 "cellular response to hypoxia" evidence=IEA

GO:0071361 "cellular response to ethanol" evidence=IEA

GO:0070257 "positive regulation of mucus secretion" evidence=IEA

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0050996 "positive regulation of lipid catabolic process" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0043278 "response to morphine" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=IEA

GO:0035641 "locomotory exploration behavior" evidence=IEA

GO:0035276 "ethanol binding" evidence=IEA

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0032024 "positive regulation of insulin secretion" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

GO:0030546 "receptor activator activity" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0010634 "positive regulation of epithelial cell migration" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

GO:0002281 "macrophage activation involved in immune response" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|P10830 PRKCE "Protein kinase C epsilon type" [Oryctolagus cuniculus (taxid:9986)]

 Score = 141 (54.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query:    73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct:   517 SALMFLHQHGVIYRDLKLDNILLDAEGHC-KLADFGMC 553

GO:0003785 "actin monomer binding" evidence=ISS

GO:0010634 "positive regulation of epithelial cell migration" evidence=ISS

GO:0010763 "positive regulation of fibroblast migration" evidence=ISS

GO:0030838 "positive regulation of actin filament polymerization" evidence=ISS

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=ISS

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=ISS

GO:0071944 "cell periphery" evidence=ISS

GO:0090303 "positive regulation of wound healing" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

UNIPROTKB|F1MDC9 PRKCE "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 141 (54.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query:    73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct:   518 SALMFLHQHGVIYRDLKLDNILLDAEGHC-KLADFGMC 554

GO:2001031 "positive regulation of cellular glucuronidation" evidence=IEA

GO:0090303 "positive regulation of wound healing" evidence=IEA

GO:0071889 "14-3-3 protein binding" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IEA

GO:0071456 "cellular response to hypoxia" evidence=IEA

GO:0071361 "cellular response to ethanol" evidence=IEA

GO:0070257 "positive regulation of mucus secretion" evidence=IEA

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0050996 "positive regulation of lipid catabolic process" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0043278 "response to morphine" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=IEA

GO:0035641 "locomotory exploration behavior" evidence=IEA

GO:0035276 "ethanol binding" evidence=IEA

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0032024 "positive regulation of insulin secretion" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

GO:0030546 "receptor activator activity" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0010634 "positive regulation of epithelial cell migration" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

GO:0002281 "macrophage activation involved in immune response" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|Q02156 PRKCE "Protein kinase C epsilon type" [Homo sapiens (taxid:9606)]

 Score = 141 (54.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query:    73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct:   518 SALMFLHQHGVIYRDLKLDNILLDAEGHC-KLADFGMC 554

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0002281 "macrophage activation involved in immune response" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0030546 "receptor activator activity" evidence=IEA

GO:0032024 "positive regulation of insulin secretion" evidence=IEA

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0035276 "ethanol binding" evidence=IEA

GO:0035641 "locomotory exploration behavior" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0043278 "response to morphine" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0050996 "positive regulation of lipid catabolic process" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=IEA

GO:0070257 "positive regulation of mucus secretion" evidence=IEA

GO:0071361 "cellular response to ethanol" evidence=IEA

GO:0071456 "cellular response to hypoxia" evidence=IEA

GO:0071889 "14-3-3 protein binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA;TAS

GO:0019899 "enzyme binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0090303 "positive regulation of wound healing" evidence=IMP

GO:0010634 "positive regulation of epithelial cell migration" evidence=IMP

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IMP

GO:0010763 "positive regulation of fibroblast migration" evidence=ISS

GO:0030838 "positive regulation of actin filament polymerization" evidence=ISS

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=ISS

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=ISS

GO:0003785 "actin monomer binding" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0071944 "cell periphery" evidence=ISS

GO:0004871 "signal transducer activity" evidence=TAS

GO:0006917 "induction of apoptosis" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=TAS

GO:0007202 "activation of phospholipase C activity" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=TAS

GO:0030168 "platelet activation" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0004697 "protein kinase C activity" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0008047 "enzyme activator activity" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:2001031 "positive regulation of cellular glucuronidation" evidence=IMP

MGI|MGI:97599 Prkce "protein kinase C, epsilon" [Mus musculus (taxid:10090)]

 Score = 141 (54.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query:    73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct:   518 SALMFLHQHGVIYRDLKLDNILLDAEGHC-KLADFGMC 554

GO:0000139 "Golgi membrane" evidence=ISO

GO:0000166 "nucleotide binding" evidence=IEA

GO:0002281 "macrophage activation involved in immune response" evidence=IMP

GO:0003785 "actin monomer binding" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0004697 "protein kinase C activity" evidence=ISO

GO:0004699 "calcium-independent protein kinase C activity" evidence=IDA

GO:0005102 "receptor binding" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005829 "cytosol" evidence=ISO;IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0007049 "cell cycle" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007635 "chemosensory behavior" evidence=TAS

GO:0008047 "enzyme activator activity" evidence=ISO

GO:0010634 "positive regulation of epithelial cell migration" evidence=ISO

GO:0010763 "positive regulation of fibroblast migration" evidence=IMP

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IGI;IMP

GO:0010917 "negative regulation of mitochondrial membrane potential" evidence=ISO

GO:0016020 "membrane" evidence=IDA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=ISO

GO:0019216 "regulation of lipid metabolic process" evidence=IMP

GO:0019899 "enzyme binding" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO

GO:0030546 "receptor activator activity" evidence=IDA

GO:0030838 "positive regulation of actin filament polymerization" evidence=IDA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IMP

GO:0032024 "positive regulation of insulin secretion" evidence=IMP

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=IMP

GO:0035276 "ethanol binding" evidence=IDA

GO:0035556 "intracellular signal transduction" evidence=ISO

GO:0035641 "locomotory exploration behavior" evidence=IGI

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=IMP

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP

GO:0043278 "response to morphine" evidence=IMP

GO:0043410 "positive regulation of MAPK cascade" evidence=IDA;IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IMP

GO:0050996 "positive regulation of lipid catabolic process" evidence=IMP

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IMP

GO:0051280 "negative regulation of release of sequestered calcium ion into cytosol" evidence=ISO

GO:0051301 "cell division" evidence=IEA

GO:0051562 "reduction of mitochondrial calcium ion concentration" evidence=ISO

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=IMP

GO:0070257 "positive regulation of mucus secretion" evidence=IMP

GO:0071361 "cellular response to ethanol" evidence=IGI

GO:0071456 "cellular response to hypoxia" evidence=IDA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=ISO

GO:0071889 "14-3-3 protein binding" evidence=IPI

GO:0071944 "cell periphery" evidence=IDA

GO:0090303 "positive regulation of wound healing" evidence=ISO

GO:2001031 "positive regulation of cellular glucuronidation" evidence=ISO

RGD|61925 Prkce "protein kinase C, epsilon" [Rattus norvegicus (taxid:10116)]

 Score = 140 (54.3 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query:    73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct:   518 SALMFLHQHGVIYRDLKLDNILLDAEGHS-KLADFGMC 554

GO:0000139 "Golgi membrane" evidence=IDA

GO:0002281 "macrophage activation involved in immune response" evidence=ISO

GO:0003785 "actin monomer binding" evidence=ISO;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004697 "protein kinase C activity" evidence=ISO

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA;ISO

GO:0005102 "receptor binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO;ISS

GO:0005829 "cytosol" evidence=ISO;IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0007049 "cell cycle" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=ISO

GO:0010634 "positive regulation of epithelial cell migration" evidence=ISO;ISS

GO:0010763 "positive regulation of fibroblast migration" evidence=ISO;ISS

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=ISO

GO:0010917 "negative regulation of mitochondrial membrane potential" evidence=IMP

GO:0016020 "membrane" evidence=ISO

GO:0017124 "SH3 domain binding" evidence=IPI

GO:0019216 "regulation of lipid metabolic process" evidence=ISO

GO:0019899 "enzyme binding" evidence=ISO

GO:0019901 "protein kinase binding" evidence=IPI

GO:0030546 "receptor activator activity" evidence=ISO

GO:0030838 "positive regulation of actin filament polymerization" evidence=ISO;ISS

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=ISO;ISS

GO:0032024 "positive regulation of insulin secretion" evidence=ISO

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=ISO

GO:0035276 "ethanol binding" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=IDA

GO:0035641 "locomotory exploration behavior" evidence=ISO

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=ISO;ISS

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0043278 "response to morphine" evidence=ISO

GO:0043410 "positive regulation of MAPK cascade" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;ISS

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0050996 "positive regulation of lipid catabolic process" evidence=ISO

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=ISO

GO:0051280 "negative regulation of release of sequestered calcium ion into cytosol" evidence=IMP

GO:0051301 "cell division" evidence=IEA

GO:0051562 "reduction of mitochondrial calcium ion concentration" evidence=IMP

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=ISO

GO:0070257 "positive regulation of mucus secretion" evidence=ISO

GO:0071361 "cellular response to ethanol" evidence=ISO

GO:0071456 "cellular response to hypoxia" evidence=ISO

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=ISO;ISS

GO:0071889 "14-3-3 protein binding" evidence=ISO

GO:0071944 "cell periphery" evidence=ISO;ISS

GO:0090303 "positive regulation of wound healing" evidence=ISO;ISS

GO:2001031 "positive regulation of cellular glucuronidation" evidence=ISO

UNIPROTKB|F1PMX4 PRKCE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 141 (54.7 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query:    73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct:   518 SALMFLHQHGVIYRDLKLDNILLDAEGHC-KLADFGMC 554

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

ZFIN|ZDB-GENE-030131-8191 prkcea "protein kinase C, epsilon a" [Danio rerio (taxid:7955)]

 Score = 141 (54.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query:    73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             + L FLH+HGV+YRDLKLDNILLDA G   KLADFG C
Sbjct:   525 SALMFLHQHGVIYRDLKLDNILLDAEGHC-KLADFGMC 561

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|K7EL10 PKN1 "Serine/threonine-protein kinase N1" [Homo sapiens (taxid:9606)]

 Score = 124 (48.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 24/36 (66%), Positives = 28/36 (77%)

Query:    75 LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             L FLH H +VYRDLKLDN+LLD  G  +K+ADFG C
Sbjct:   132 LQFLHEHKIVYRDLKLDNLLLDTEG-YVKIADFGLC 166

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	127
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	7e-14
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-13
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	5e-13
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-12
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	8e-12
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-11
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-11
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	5e-11
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-10
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-10
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-10
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-10
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	4e-10
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-10
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	4e-10
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-10
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	5e-10
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	7e-10
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-09
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-09
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-09
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-09
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	1e-09
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-09
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	4e-09
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	5e-09
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	6e-09
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	7e-09
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	9e-09
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-08
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-08
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-08
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-08
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-08
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-08
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-08
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-08
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	8e-08
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	9e-08
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-07
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-07
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-07
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-07
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-07
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-07
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-07
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	3e-07
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	3e-07
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	3e-07
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-07
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-07
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	4e-07
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-07
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	5e-07
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-07
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	6e-07
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	8e-07
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	8e-07
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-06
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-06
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-06
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-06
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-06
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-06
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-06
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-06
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-06
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	3e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-06
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-06
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	4e-06
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	4e-06
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-06
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	4e-06
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-06
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	5e-06
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	5e-06
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	5e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	6e-06
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	7e-06
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	7e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	7e-06
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	8e-06
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	8e-06
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	9e-06
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-05
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-05
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-05
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-05
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-05
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-05
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	2e-05
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-05
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-05
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-05
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-05
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-05
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	4e-05
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	5e-05
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	6e-05
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	6e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	6e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	6e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	7e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-05
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	8e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	9e-05
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	9e-05
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-04
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-04
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-04
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-04
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-04
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	3e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-04
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-04
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	4e-04
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	4e-04
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-04
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	4e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	4e-04
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	4e-04
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	4e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	5e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	6e-04
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	6e-04
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	7e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.001
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	0.001
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	0.001
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	0.001
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.001
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	0.001
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.001
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.002
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.002
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	0.002
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	0.002
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	0.003
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.003
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	0.003
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	0.003
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	0.003
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.004
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	0.004
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.004
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	0.004

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 66.0 bits (161), Expect = 7e-14
 Identities = 29/36 (80%), Positives = 30/36 (83%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FLHRHGV+YRDLKLDNILLDA G   KLADFG C
Sbjct: 109 LMFLHRHGVIYRDLKLDNILLDAEGH-CKLADFGMC 143

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 63.9 bits (156), Expect = 3e-13
 Identities = 42/149 (28%), Positives = 52/149 (34%), Gaps = 70/149 (46%)

Query: 31  FHFIKVLGKGSFGKELFGHYRS---------------ITNDTNSILR------------- 62
           F  + VLG+G FGK L   Y+                I  D    L              
Sbjct: 1   FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER 60

Query: 63  --FLLLLLC----------------AGD-------------------AC----LTFLHRH 81
             FL+ L                   GD                   AC    L +LH +
Sbjct: 61  HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN 120

Query: 82  GVVYRDLKLDNILLDAGGSLLKLADFGRC 110
            +VYRDLKLDN+LLD  G  +K+ADFG C
Sbjct: 121 KIVYRDLKLDNLLLDTEG-FVKIADFGLC 148

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 63.6 bits (155), Expect = 5e-13
 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 6/50 (12%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA-----RKKIKLFC 119
           L FLH  G++YRDLKLDN+LLD+ G  +K+ADFG C            FC
Sbjct: 109 LQFLHERGIIYRDLKLDNVLLDSEGH-IKIADFGMCKEGILGGVTTSTFC 157

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G +LF   +     +    RF L  + +    L +LH  G+V+RDLK +NILLD  G  +
Sbjct: 81  GGDLFDLLKKRGRLSEDEARFYLRQILSA---LEYLHSKGIVHRDLKPENILLDEDGH-V 136

Query: 103 KLADFGRCAR 112
           KLADFG   +
Sbjct: 137 KLADFGLARQ 146

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 59.5 bits (145), Expect = 8e-12
 Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L +LH  G++YRDLK +NILLDA G  +KL DFG    
Sbjct: 106 LEYLHSLGIIYRDLKPENILLDADGH-IKLTDFGLAKE 142

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 21/40 (52%), Positives = 32/40 (80%), Gaps = 2/40 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK 114
           L +LH +G+V+RD+K  NIL+D+ G ++KLADFG CA++ 
Sbjct: 114 LAYLHSNGIVHRDIKGANILVDSDG-VVKLADFG-CAKRL 151

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 58.3 bits (142), Expect = 3e-11
 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 5/53 (9%)

Query: 56  DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
             N I   +  LL      L + H H +++RDLK  NIL++  G +LKLADFG
Sbjct: 96  SPNLIKSIMYQLLRG----LAYCHSHRILHRDLKPQNILINRDG-VLKLADFG 143

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 57.9 bits (140), Expect = 5e-11
 Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 6/50 (12%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           L FLH  G++YRDLKLDN++LDA G  +K+ADFG C       K  + FC
Sbjct: 114 LFFLHSKGIIYRDLKLDNVMLDAEGH-IKIADFGMCKENIFGGKTTRTFC 162

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)

Query: 43  GKELFGHYR-SITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSL 101
           G +LF +         +   +  L +L      L +LH +G+++RDLK +NILLD  G  
Sbjct: 82  GGDLFDYLSRGGPLSEDEAKKIALQILRG----LEYLHSNGIIHRDLKPENILLDENGV- 136

Query: 102 LKLADFGRCARKKIK 116
           +K+ADFG  A+K +K
Sbjct: 137 VKIADFG-LAKKLLK 150

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 4/69 (5%)

Query: 43  GKELFGHYRSITND-TNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSL 101
           G  L    +      +   +  +LL +  G   L +LH +G+++RDLK +NILLD+    
Sbjct: 75  GGSLKDLLKENEGKLSEDEILRILLQILEG---LEYLHSNGIIHRDLKPENILLDSDNGK 131

Query: 102 LKLADFGRC 110
           +KLADFG  
Sbjct: 132 VKLADFGLS 140

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 55.3 bits (134), Expect = 3e-10
 Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 1/36 (2%)

Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
             L +LH +G+++RDLK DNIL+D+ G  LKL DFG
Sbjct: 104 LALEYLHSNGIIHRDLKPDNILIDSNGH-LKLTDFG 138

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 55.6 bits (134), Expect = 3e-10
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 6/50 (12%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC-----ARKKIKLFC 119
           L FLH+ G++YRDLKLDN+LLD  G  +K+ADFG C        K   FC
Sbjct: 109 LQFLHKKGIIYRDLKLDNVLLDKDGH-IKIADFGMCKENMNGEGKASTFC 157

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 55.6 bits (134), Expect = 4e-10
 Identities = 23/36 (63%), Positives = 28/36 (77%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FLH  G++YRDLKLDN+LLDA G  +KL D+G C
Sbjct: 109 LNFLHERGIIYRDLKLDNVLLDAEGH-IKLTDYGMC 143

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 55.3 bits (134), Expect = 4e-10
 Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L +LH   V++RD+K DNILL   GS +KLADFG  A+
Sbjct: 129 LEYLHSQNVIHRDIKSDNILLSKDGS-VKLADFGFAAQ 165

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 55.4 bits (133), Expect = 4e-10
 Identities = 25/36 (69%), Positives = 28/36 (77%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FLH  G+VYRDLKLDNILLD  G  +K+ADFG C
Sbjct: 109 LQFLHSKGIVYRDLKLDNILLDTDGH-IKIADFGMC 143

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 55.5 bits (132), Expect = 5e-10
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 31  FHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKL 90
           +  ++ +  GS  ++L          + S   F+L  + +    L +LH  G+++RD+K 
Sbjct: 74  YLVMEYVDGGSL-EDLLKKIGRKGPLSESEALFILAQILSA---LEYLHSKGIIHRDIKP 129

Query: 91  DNILLDAGGSLLKLADFG 108
           +NILLD  G ++KL DFG
Sbjct: 130 ENILLDRDGRVVKLIDFG 147

Length = 384

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 55.3 bits (133), Expect = 5e-10
 Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           + L FLH  G++YRDLKLDN+LLD  G   KLADFG C
Sbjct: 107 SALMFLHDKGIIYRDLKLDNVLLDHEGH-CKLADFGMC 143

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 54.6 bits (131), Expect = 7e-10
 Identities = 23/36 (63%), Positives = 30/36 (83%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FLHR G++YRDLKLDN++LD+ G  +K+ADFG C
Sbjct: 114 LFFLHRRGIIYRDLKLDNVMLDSEGH-IKIADFGMC 148

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 54.0 bits (130), Expect = 1e-09
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 43  GKELFGHYRSITNDTNSILRFLLL-LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSL 101
           G ELF + R+    +NS   F    ++CA    L +LH   +VYRDLK +NILLD  G  
Sbjct: 85  GGELFSYLRNSGRFSNSTGLFYASEIVCA----LEYLHSKEIVYRDLKPENILLDKEGH- 139

Query: 102 LKLADFG 108
           +KL DFG
Sbjct: 140 IKLTDFG 146

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 7/61 (11%)

Query: 56  DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKI 115
           D + I  + L LL      L +LH HG+V+RD+K  NI LD  G ++KL DFG CA  K+
Sbjct: 97  DEHVIRVYTLQLLEG----LAYLHSHGIVHRDIKPANIFLDHNG-VIKLGDFG-CA-VKL 149

Query: 116 K 116
           K
Sbjct: 150 K 150

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 10/76 (13%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G ELF H R        + RF      A    L    LH   +VYRDLK +N+LLD+ G 
Sbjct: 85  GGELFSHLRKSGRFPEPVARFY-----AAQVVLALEYLHSLDIVYRDLKPENLLLDSDGY 139

Query: 101 LLKLADFGRCARKKIK 116
            +K+ DFG    K++K
Sbjct: 140 -IKITDFGFA--KRVK 152

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 53.9 bits (129), Expect = 1e-09
 Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 6/50 (12%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK-----KIKLFC 119
           L FLH  G++YRDLKLDN++LD+ G  +K+ADFG C          K FC
Sbjct: 114 LFFLHSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENMWDGVTTKTFC 162

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 53.9 bits (129), Expect = 1e-09
 Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 3/43 (6%)

Query: 70  AGDAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           A + C  L FLH  G++YRDLKLDN+LLDA G  +KL D+G C
Sbjct: 102 AAEICIALNFLHERGIIYRDLKLDNVLLDADGH-IKLTDYGMC 143

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 4/54 (7%)

Query: 57  TNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             S+++  L  L  G   L F H HG+++RDLK +N+L++  G +LKLADFG  
Sbjct: 96  PESLIKSYLYQLLQG---LAFCHSHGILHRDLKPENLLINTEG-VLKLADFGLA 145

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 52.5 bits (126), Expect = 4e-09
 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 6/50 (12%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           L +LH   VVYRDLKL+N++LD  G  +K+ DFG C         +K FC
Sbjct: 108 LGYLHSCDVVYRDLKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFC 156

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 52.1 bits (125), Expect = 5e-09
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 48  GHYRSITN--DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLA 105
            + R         +I  F+  L   G   +   H+HGV++RDLK  N+L+D    LLK+A
Sbjct: 98  SNGRGPGRPLPAKTIKSFMYQL-LKG---VAHCHKHGVMHRDLKPQNLLVDKQKGLLKIA 153

Query: 106 DFG 108
           D G
Sbjct: 154 DLG 156

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 52.1 bits (125), Expect = 6e-09
 Identities = 21/38 (55%), Positives = 30/38 (78%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L+FLH  GV++RD+K D+ILL + G  +KL+DFG CA+
Sbjct: 128 LSFLHAQGVIHRDIKSDSILLTSDGR-VKLSDFGFCAQ 164

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 51.9 bits (125), Expect = 7e-09
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 6/54 (11%)

Query: 58  NSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
             +  ++  LL +    L  +HR+G+ +RD+K +NIL+     +LKLADFG C 
Sbjct: 100 KRVKSYMYQLLKS----LDHMHRNGIFHRDIKPENILIKDD--ILKLADFGSCR 147

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 51.5 bits (124), Expect = 9e-09
 Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 13/75 (17%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDAC----LTFLHRHGVVYRDLKLDNILLDAG 98
           G EL+   R          RF +       AC      +LH  G++YRDLK +N+LLD+ 
Sbjct: 77  GGELWTILRDRGLFDEYTARFYI-------ACVVLAFEYLHNRGIIYRDLKPENLLLDSN 129

Query: 99  GSLLKLADFGRCARK 113
           G  +KL DFG  A+K
Sbjct: 130 G-YVKLVDFG-FAKK 142

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 51.1 bits (122), Expect = 1e-08
 Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FLH  G++YRDLKLDN++LD  G  +K+ADFG C
Sbjct: 109 LQFLHSKGIIYRDLKLDNVMLDRDGH-IKIADFGMC 143

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH +G ++RD+K  NILL   GS +K+ADFG
Sbjct: 115 LEYLHSNGQIHRDIKAGNILLGEDGS-VKIADFG 147

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 50.4 bits (120), Expect = 2e-08
 Identities = 21/36 (58%), Positives = 28/36 (77%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L +LH  G++YRDLKLDN+LLD+ G  +KL D+G C
Sbjct: 109 LNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMC 143

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 50.2 bits (120), Expect = 2e-08
 Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 58  NSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            +++      L  G   L++LH + +++RD+K  N+L+D+ G  L++ADFG  AR
Sbjct: 102 EAVIINYTEQLLRG---LSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 4/56 (7%)

Query: 57  TNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
                RF +  L      L  +H+ G ++RD+K DNIL+DA G  +KLADFG C +
Sbjct: 99  PEETARFYIAELVL---ALDSVHKLGFIHRDIKPDNILIDADGH-IKLADFGLCKK 150

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 50.3 bits (120), Expect = 2e-08
 Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L FLH + V++RD+K DNILL   GS +KL DFG CA+
Sbjct: 128 LEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ 164

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 18/34 (52%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH +G+++RD+K  NIL++  G  LKLADFG
Sbjct: 113 LQYLHSNGILHRDIKGSNILINNDGV-LKLADFG 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 49.1 bits (118), Expect = 5e-08
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCD 120
           L +LH +G+++RD+K  NILL + G  +KL DFG  A+       +
Sbjct: 111 LEYLHSNGIIHRDIKAANILLTSDGE-VKLIDFGLSAQLSDTKARN 155

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 49.0 bits (117), Expect = 8e-08
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 8/68 (11%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G ELF H R      N + +F      A +  L F  LH   ++YRDLK +N+LLD  G 
Sbjct: 102 GGELFTHLRKAGRFPNDVAKFY----HA-ELVLAFEYLHSKDIIYRDLKPENLLLDNKGH 156

Query: 101 LLKLADFG 108
            +K+ DFG
Sbjct: 157 -VKVTDFG 163

Length = 329

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 49.1 bits (117), Expect = 9e-08
 Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 4/52 (7%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKL 126
           L +LHRHG+++RDLK DN+L+   G  +KL DFG     K+ L  +L ++ +
Sbjct: 117 LDYLHRHGIIHRDLKPDNMLISNEGH-IKLTDFG---LSKVTLNRELNMMDI 164

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L  LH+ G++YRDLK +NILLDA G  +KL DFG C
Sbjct: 113 LEHLHQQGIIYRDLKPENILLDAQGH-VKLTDFGLC 147

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 17/34 (50%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH + +++RDLK +N+L+ + G  LKLADFG
Sbjct: 115 LEYLHSNWILHRDLKPNNLLIASDGV-LKLADFG 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 48.2 bits (115), Expect = 1e-07
 Identities = 23/40 (57%), Positives = 27/40 (67%), Gaps = 1/40 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK 114
           L FLH H V++RDLK  NILL   G  +KLADFG  A+ K
Sbjct: 116 LNFLHSHKVIHRDLKAGNILLTLDGD-VKLADFGVSAKNK 154

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 4/66 (6%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF H     + T S +R  +  +      L  LH+ G++YRD+KL+NILLD+ G  +
Sbjct: 89  GGELFTHLYQREHFTESEVRVYIAEIVLA---LDHLHQLGIIYRDIKLENILLDSEGH-V 144

Query: 103 KLADFG 108
            L DFG
Sbjct: 145 VLTDFG 150

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH  GV++RD+K  NIL    G  +KLADFG
Sbjct: 112 LAYLHEQGVIHRDIKAANILTTKDGV-VKLADFG 144

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L  +H  G ++RD+K DN+LLD  G  LKLADFG C +
Sbjct: 155 LDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMK 191

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 2/38 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L  +H+HG  +RDLK +N+L+ +G  ++K+ADFG  AR
Sbjct: 112 LAHIHKHGFFHRDLKPENLLV-SGPEVVKIADFG-LAR 147

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + FLH H +V+RDLK  NIL+ + G  +K+ADFG
Sbjct: 120 VDFLHSHRIVHRDLKPQNILVTSDGQ-VKIADFG 152

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 46.9 bits (111), Expect = 3e-07
 Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L FLH H VV+RDLK  NIL+ + G  +KLADFG
Sbjct: 123 LDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFG 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 47.0 bits (112), Expect = 3e-07
 Identities = 18/34 (52%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
            +H+ G ++RD+K DN+LLDA G  +KL+DFG C
Sbjct: 116 SIHKLGYIHRDIKPDNLLLDAKGH-IKLSDFGLC 148

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 46.9 bits (112), Expect = 4e-07
 Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 4/52 (7%)

Query: 57  TNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
             + ++  + +L  G   + ++H +G+++RDLK  N+L+ A G  LK+ADFG
Sbjct: 97  PEAQVKSYMRMLLKG---VAYMHANGIMHRDLKPANLLISADGV-LKIADFG 144

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 47.0 bits (111), Expect = 4e-07
 Identities = 20/38 (52%), Positives = 30/38 (78%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L++LH  GV++RD+K D+ILL + G  +KL+DFG CA+
Sbjct: 131 LSYLHNQGVIHRDIKSDSILLTSDGR-IKLSDFGFCAQ 167

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 46.9 bits (111), Expect = 4e-07
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H     N +   +RF      +G+  L    LH+ G+VYRD+KL+NILLD+ G 
Sbjct: 89  GGEMFTHLYQRDNFSEDEVRFY-----SGEIILALEHLHKLGIVYRDIKLENILLDSEGH 143

Query: 101 LLKLADFG 108
           ++ L DFG
Sbjct: 144 VV-LTDFG 150

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 46.6 bits (110), Expect = 5e-07
 Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L FLH + V++RD+K DNILL   GS +KL DFG CA+
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ 165

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 6/65 (9%)

Query: 45  ELFGHYRSITN-DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLK 103
           EL  + R   + D      +   +L A    L +LH  G+++RDLK +NILLD     +K
Sbjct: 88  ELLQYIRKYGSLDEKCTRFYAAEILLA----LEYLHSKGIIHRDLKPENILLDKDMH-IK 142

Query: 104 LADFG 108
           + DFG
Sbjct: 143 ITDFG 147

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 46.5 bits (110), Expect = 5e-07
 Identities = 32/69 (46%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 43  GKELFGHYRSITNDTNSILRFLLL-LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSL 101
           G ELF H +       S  RF    LLCA    L  LH+  V+YRDLK +NILLD  G  
Sbjct: 77  GGELFHHLQREGRFDLSRARFYTAELLCA----LENLHKFNVIYRDLKPENILLDYQGH- 131

Query: 102 LKLADFGRC 110
           + L DFG C
Sbjct: 132 IALCDFGLC 140

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 46.2 bits (110), Expect = 6e-07
 Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH + +++RDLK+ N+LL   G  LK+ADFG
Sbjct: 121 LQYLHENFIIHRDLKVSNLLLTDKG-CLKIADFG 153

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 46.3 bits (109), Expect = 6e-07
 Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L FLH + V++RD+K DNILL   GS +KL DFG CA+
Sbjct: 128 LDFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ 164

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 46.2 bits (109), Expect = 8e-07
 Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L +LH  GV++RD+K D+ILL   G  +KL+DFG CA+
Sbjct: 130 LCYLHSQGVIHRDIKSDSILLTLDGR-VKLSDFGFCAQ 166

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 46.2 bits (109), Expect = 8e-07
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 6/52 (11%)

Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           + L +LH   VVYRD+KL+N++LD  G  +K+ DFG C         +K FC
Sbjct: 106 SALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFC 156

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)

Query: 78  LHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           +H+ G V+RD+K DN+LLD  G  ++LADFG C R
Sbjct: 118 VHQLGYVHRDIKPDNVLLDKNGH-IRLADFGSCLR 151

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 45.5 bits (107), Expect = 1e-06
 Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L FLH + V++RD+K DN+LL   GS +KL DFG CA+
Sbjct: 128 LEFLHANQVIHRDIKSDNVLLGMDGS-VKLTDFGFCAQ 164

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 6/50 (12%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           L  LH  G++YRDLK +NILLD  G  +KL DFG         KK   FC
Sbjct: 111 LDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFC 159

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 8/49 (16%)

Query: 60  ILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           ILR +LL        L +LH  G ++RD+K  NILL   G  +KLADFG
Sbjct: 103 ILREVLL-------GLEYLHEEGKIHRDIKAANILLSEEGD-VKLADFG 143

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 18/34 (52%), Positives = 27/34 (79%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH  G+++RDLK DN+L+DA G + K++DFG
Sbjct: 121 LAYLHSKGILHRDLKADNLLVDADG-ICKISDFG 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 10/66 (15%)

Query: 48  GHYRSITNDTNSI----LRFLLL-LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G +R++ N+   +     RF +  +  A DA     H  G ++RDLK +N L+DA G  +
Sbjct: 86  GDFRTLLNNLGVLSEDHARFYMAEMFEAVDAL----HELGYIHRDLKPENFLIDASGH-I 140

Query: 103 KLADFG 108
           KL DFG
Sbjct: 141 KLTDFG 146

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 18/90 (20%)

Query: 33  FIKVLGKGSFGKEL--FGHYRS--ITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDL 88
           F++++  GS  K L  +G +    I   T  IL             L +LH    V+RD+
Sbjct: 80  FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQIL-----------LGLEYLHDRNTVHRDI 128

Query: 89  KLDNILLDAGGSLLKLADFGRCARKKIKLF 118
           K  NIL+D  G ++KLADFG    K++  F
Sbjct: 129 KGANILVDTNG-VVKLADFG--MAKQVVEF 155

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 44.9 bits (106), Expect = 2e-06
 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 4/66 (6%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF H +     +    +F +  L      L  LH++ +VYRDLK +NILLDA G  +
Sbjct: 80  GGELFWHLQKEGRFSEDRAKFYIAELVLA---LEHLHKYDIVYRDLKPENILLDATGH-I 135

Query: 103 KLADFG 108
            L DFG
Sbjct: 136 ALCDFG 141

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 20/34 (58%), Positives = 27/34 (79%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L FLH + +V+RDLK +NIL+ +GG  +KLADFG
Sbjct: 121 LDFLHANCIVHRDLKPENILVTSGGQ-VKLADFG 153

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 44.6 bits (105), Expect = 3e-06
 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF H +   +      RF    + +    L +LH   +VYRDLK +NILLD+ G ++
Sbjct: 80  GGELFFHLQRERSFPEPRARFYAAEIASA---LGYLHSINIVYRDLKPENILLDSQGHVV 136

Query: 103 KLADFGRC 110
            L DFG C
Sbjct: 137 -LTDFGLC 143

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 3e-06
 Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + + H H +++RD+K +NIL+   G +LKL DFG
Sbjct: 113 IAYCHSHNIIHRDIKPENILVSESG-VLKLCDFG 145

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 44.4 bits (105), Expect = 3e-06
 Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDAC-LTFLHRHGVVYRDLKLDNILLDAGGSL 101
           G ELF H +   +      RF      A  A  L +LH   ++YRDLK +NILLD+ G +
Sbjct: 80  GGELFFHLQRERSFPEPRARFY----AAEIASALGYLHSLNIIYRDLKPENILLDSQGHV 135

Query: 102 LKLADFGRC 110
           + L DFG C
Sbjct: 136 V-LTDFGLC 143

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 44.2 bits (104), Expect = 3e-06
 Identities = 19/34 (55%), Positives = 27/34 (79%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L  LH+ G++YRD+KL+NILLD+ G ++ L DFG
Sbjct: 118 LEHLHKLGIIYRDIKLENILLDSNGHVV-LTDFG 150

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 44.1 bits (104), Expect = 3e-06
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 4/53 (7%)

Query: 56  DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           D ++IL F + +L A    L  +H   +++RDLK  NILLD    ++K+ DFG
Sbjct: 99  DEDTILHFFVQILLA----LHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFG 147

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 43.8 bits (104), Expect = 4e-06
 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH +  ++RD+K  NILL+  G   KLADFG
Sbjct: 112 LEYLHSNKKIHRDIKAGNILLNEEG-QAKLADFG 144

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 4e-06
 Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 3/45 (6%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFC 119
           + +LH + +V+RD+K  NIL D+ G+ +KL DFG  A K+++  C
Sbjct: 117 VEYLHSNMIVHRDIKGANILRDSAGN-VKLGDFG--ASKRLQTIC 158

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 43.8 bits (104), Expect = 4e-06
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 57  TNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +   ++F +  +      L +LH  G+++RD+K DNILLD  G  + + DF 
Sbjct: 98  SEEQVKFWICEIVLA---LEYLHSKGIIHRDIKPDNILLDEQGH-VHITDFN 145

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            L ++H   V++RDLK  NILL++    +KLADFG
Sbjct: 119 ALKYIHSGNVIHRDLKPSNILLNS-DCRVKLADFG 152

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 4e-06
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L +LH + V++RD+K  NILL      +KL DFG  A
Sbjct: 126 LAYLHENKVIHRDIKGQNILLTKNAE-VKLVDFGVSA 161

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 43.8 bits (103), Expect = 4e-06
 Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)

Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           + L +LH   +VYRDLK +NILLD+ G ++ L DFG C
Sbjct: 107 SALGYLHSLNIVYRDLKPENILLDSQGHIV-LTDFGLC 143

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 43.9 bits (103), Expect = 4e-06
 Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L+ LH  GV++RD+K D+ILL   G  +KL+DFG CA+
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQ 165

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 5/53 (9%)

Query: 61  LRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK 113
           ++ L+L L +G A    LH + +++RDLK  N+LL+  G +LK+ DFG  AR+
Sbjct: 108 VKCLMLQLLSGVA---HLHDNWILHRDLKTSNLLLNNRG-ILKICDFG-LARE 155

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 43.6 bits (103), Expect = 5e-06
 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 5/44 (11%)

Query: 67  LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L CA ++    +H+ G ++RD+K DNIL+D  G  +KL DFG C
Sbjct: 110 LTCAIES----VHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLC 148

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 5e-06
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 4/41 (9%)

Query: 68  LCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L  G   + + H H V++RDLK  N+L+D  G+ LKLADFG
Sbjct: 108 LLQG---IAYCHSHRVLHRDLKPQNLLIDREGA-LKLADFG 144

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH   +++RD+K  NI L + G L+KL DFG
Sbjct: 116 LKYLHSRKILHRDIKPQNIFLTSNG-LVKLGDFG 148

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 43.3 bits (102), Expect = 7e-06
 Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L F H H V++RDLK  N+L++  G+ +KLADFG
Sbjct: 113 LAFCHSHRVLHRDLKPQNLLINTEGA-IKLADFG 145

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 43.3 bits (102), Expect = 7e-06
 Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)

Query: 78  LHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +H+ G ++RD+K DNIL+D GG  +KL+DFG
Sbjct: 117 VHKLGFIHRDIKPDNILIDRGGH-IKLSDFG 146

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 43.2 bits (102), Expect = 7e-06
 Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            +  LH+ G+++RD+K +N+L+D  G  LKL DFG
Sbjct: 109 GVEDLHQRGIIHRDIKPENLLIDQTGH-LKLTDFG 142

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 43.1 bits (101), Expect = 8e-06
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 6/52 (11%)

Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           + L +LH   +VYRDLKL+N++LD  G  +K+ DFG C         +K FC
Sbjct: 106 SALDYLHSGKIVYRDLKLENLMLDKDGH-IKITDFGLCKEGITDAATMKTFC 156

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 8e-06
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 5/41 (12%)

Query: 67  LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADF 107
           +L A    L +LH  G+VYRDLK +NILL   G ++ L+DF
Sbjct: 112 VLLA----LEYLHLLGIVYRDLKPENILLHESGHIM-LSDF 147

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 42.7 bits (101), Expect = 9e-06
 Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH  G ++RD+K  NILL   G  +KLADFG
Sbjct: 114 LAYLHETGKIHRDIKGANILLTEDGD-VKLADFG 146

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 17/34 (50%), Positives = 24/34 (70%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + + H H V++RDLK  N+L+D   + LKLADFG
Sbjct: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFG 148

Length = 294

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L  +H  G+++RD+K DN+LLD  G  LKLADFG C +
Sbjct: 155 LDAIHSMGLIHRDVKPDNMLLDKHGH-LKLADFGTCMK 191

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 42.5 bits (100), Expect = 1e-05
 Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)

Query: 78  LHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           +H+ G V+RD+K +N+L+D  G  +KLADFG  AR
Sbjct: 118 VHQMGYVHRDIKPENVLIDRTGH-IKLADFGSAAR 151

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 17/34 (50%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++HR+ +++RD+K  NIL+   G +LKLADFG
Sbjct: 132 LYYIHRNKILHRDMKAANILITKDG-ILKLADFG 164

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           + +LH   ++YRDLK +NILLD+ G ++ L DFG C
Sbjct: 109 IGYLHSLNIIYRDLKPENILLDSQGHVV-LTDFGLC 143

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 15/38 (39%), Positives = 27/38 (71%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L +LH + +V+RD+K DN+L++    ++K++DFG   R
Sbjct: 121 LKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + F H   V++RDLK  N+L+D  G ++KLADFG
Sbjct: 114 ILFCHSRRVLHRDLKPQNLLIDNKG-VIKLADFG 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 5/53 (9%)

Query: 56  DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           D   +  F+  LL      L F H H V++RDLK  N+L++  G  LKLADFG
Sbjct: 97  DPEIVKSFMFQLLKG----LAFCHSHNVLHRDLKPQNLLINKNGE-LKLADFG 144

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 42.1 bits (99), Expect = 2e-05
 Identities = 18/34 (52%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH +G+V+RDLK DN+L+ + G  +KL DFG
Sbjct: 114 LEYLHNYGIVHRDLKPDNLLITSMGH-IKLTDFG 146

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 18/33 (54%), Positives = 26/33 (78%), Gaps = 1/33 (3%)

Query: 78  LHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           +H+ G ++RD+K DN+LLDA G  +KL+DFG C
Sbjct: 117 IHQLGFIHRDIKPDNLLLDAKGH-VKLSDFGLC 148

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 66  LLLCAGDAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           LL  A      + +L     ++RDL   N L+     ++K++DFG
Sbjct: 104 LLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL-VVKISDFG 147

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 41.9 bits (98), Expect = 2e-05
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L  +H  G ++RD+K DN+LLD  G  LKLADFG C +
Sbjct: 155 LDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMK 191

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 41.7 bits (98), Expect = 2e-05
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L +LH H  ++RD+K  NILL   G  +KLADFG  +
Sbjct: 128 LAYLHSHERIHRDIKAGNILLTEPG-TVKLADFGSAS 163

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 41.9 bits (98), Expect = 2e-05
 Identities = 38/154 (24%), Positives = 53/154 (34%), Gaps = 69/154 (44%)

Query: 23  DRKVGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRF------------------- 63
             K+  EDF+FI+ LG GSFG+ +   Y++      +I RF                   
Sbjct: 24  KNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERK 83

Query: 64  ------------------------LLLLLCAGDACLTFLHRH------------------ 81
                                   L+L    G    TFL R+                  
Sbjct: 84  ILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLI 143

Query: 82  -------GVVYRDLKLDNILLDAGGSLLKLADFG 108
                   +VYRDLK +N+LLD  G  +K+ DFG
Sbjct: 144 FEYLQSLNIVYRDLKPENLLLDKDG-FIKMTDFG 176

Length = 340

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 59  SILRFLLLLLCAGDAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           S L    LL  A      + +L     V+RDL   N L+     ++K++DFG
Sbjct: 100 STLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL-VVKISDFG 150

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 41.3 bits (97), Expect = 3e-05
 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L ++H+ GV++RD+K  NIL+   G+ +KL DFG  A
Sbjct: 114 LKYIHKVGVIHRDIKAANILVTNTGN-VKLCDFGVAA 149

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 41.3 bits (97), Expect = 3e-05
 Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + F H + V++RDLK  N+L++  G  LKLADFG
Sbjct: 113 IAFCHENRVLHRDLKPQNLLINKRGE-LKLADFG 145

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 66  LLLCAGDAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           LL  A      + +L     ++RDL   N L+     ++K++DFG
Sbjct: 105 LLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL-VVKISDFG 148

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 41.2 bits (96), Expect = 4e-05
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 73  ACLTFLH-RHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           + L +LH    VVYRDLKL+N++LD  G  +K+ DFG C         +K FC
Sbjct: 106 SALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFC 157

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 41.1 bits (96), Expect = 5e-05
 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 5/44 (11%)

Query: 67  LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L CA ++    +H+ G ++RD+K DNIL+D  G  +KL DFG C
Sbjct: 110 LTCAVES----VHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLC 148

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)

Query: 78  LHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           +H+ G ++RD+K DNIL+D  G  +KL DFG C
Sbjct: 117 VHKMGFIHRDIKPDNILIDLDGH-IKLTDFGLC 148

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 17/33 (51%), Positives = 26/33 (78%), Gaps = 1/33 (3%)

Query: 78  LHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           +H+ G ++RD+K DN+LLD+ G  +KL+DFG C
Sbjct: 117 IHQLGFIHRDIKPDNLLLDSKGH-VKLSDFGLC 148

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 40.6 bits (96), Expect = 6e-05
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           FL  +L      L +LH   V++RDLK  NIL+++    LK+ DFG
Sbjct: 108 FLYQILRG----LKYLHSANVIHRDLKPSNILVNS-NCDLKICDFG 148

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 40.4 bits (95), Expect = 6e-05
 Identities = 18/29 (62%), Positives = 24/29 (82%), Gaps = 1/29 (3%)

Query: 80  RHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +HGV++RD+K  NILLDA G+ +KL DFG
Sbjct: 133 KHGVIHRDVKPSNILLDASGN-VKLCDFG 160

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.4 bits (94), Expect = 7e-05
 Identities = 20/45 (44%), Positives = 32/45 (71%), Gaps = 3/45 (6%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFC 119
           +++LH + +V+RD+K  NIL D+ G+ +KL DFG  A K+I+  C
Sbjct: 119 VSYLHSNMIVHRDIKGANILRDSAGN-VKLGDFG--ASKRIQTIC 160

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 40.2 bits (95), Expect = 7e-05
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 61  LRFLLLLLCAGDAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L    LL  A      + +L     V+RDL   N L+     ++K++DFG
Sbjct: 99  LTLKDLLQMALQIAKGMEYLESKNFVHRDLAARNCLVTENL-VVKISDFG 147

Length = 258

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 40.4 bits (94), Expect = 8e-05
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L +LH + +++RDLK  NIL    G  +KLADFG  A+
Sbjct: 116 LNYLHENKIIHRDLKAGNILFTLDGD-IKLADFGVSAK 152

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 40.1 bits (93), Expect = 9e-05
 Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH H +++RD+K  NILL   G  +KLADFG
Sbjct: 138 LAYLHSHNMIHRDIKAGNILLTEPGQ-VKLADFG 170

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 40.0 bits (93), Expect = 9e-05
 Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH H +++RD+K  NILL   G  +KLADFG
Sbjct: 134 LAYLHSHNMIHRDIKAGNILLTEPGQ-VKLADFG 166

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)

Query: 78  LHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           +H+   V+RD+K DN+LLD  G  ++LADFG C +
Sbjct: 118 IHQLHYVHRDIKPDNVLLDMNGH-IRLADFGSCLK 151

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L +LH   +++RDLK  N+LL   G  +KLADFG  A+
Sbjct: 123 LQYLHSMKIIHRDLKAGNVLLTLDGD-IKLADFGVSAK 159

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 3/45 (6%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFC 119
           +++LH + +V+RD+K  NIL D+ G+ +KL DFG  A K+++  C
Sbjct: 119 MSYLHSNMIVHRDIKGANILRDSAGN-VKLGDFG--ASKRLQTIC 160

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 14/34 (41%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + +LHR  +V+RD+K  N+L+++  + +K+ADFG
Sbjct: 181 IAYLHRRHIVHRDIKPSNLLINSAKN-VKIADFG 213

Length = 353

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK 114
           L + H+  V++RDLK  N+L+   G  LKLADFG  AR K
Sbjct: 116 LAYCHQRRVLHRDLKPQNLLISERGE-LKLADFG-LARAK 153

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH H +++RD+K  NILL   G L+KL DFG
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPG-LVKLGDFG 160

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKI 115
           L ++H   +++RDLK  N+L+   G  LKLADFG    K I
Sbjct: 116 LAYIHGQHILHRDLKPQNLLISYLGE-LKLADFGLARAKSI 155

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  GVV+RDLK  NIL++     LK+ DFG
Sbjct: 121 LKYVHSAGVVHRDLKPSNILINENCD-LKICDFG 153

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 75  LTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L +LH    +++RD+K  N+L+++ G  +K+ADFG   
Sbjct: 112 LDYLHTKRHIIHRDIKPSNLLINSKGE-VKIADFGISK 148

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 18/39 (46%), Positives = 29/39 (74%), Gaps = 2/39 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK 113
           + +LH + VV+RD+K +N++L   G ++KL DFG CAR+
Sbjct: 115 VAYLHNNCVVHRDIKGNNVMLMPNG-IIKLIDFG-CARR 151

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 17/35 (48%), Positives = 26/35 (74%), Gaps = 2/35 (5%)

Query: 75  LTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFG 108
           LT+LH  H +++RD+K  NIL+++ G  +KL DFG
Sbjct: 113 LTYLHEKHKIIHRDVKPSNILVNSRGQ-IKLCDFG 146

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH  G+++RD+K +NI LD   + + L DFG
Sbjct: 198 LAYLHGRGIIHRDVKTENIFLDEPENAV-LGDFG 230

Length = 392

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 3/45 (6%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFC 119
           +++LH + +V+RD+K  NIL D+ G+ +KL DFG  A K+++  C
Sbjct: 119 VSYLHSNMIVHRDIKGANILRDSVGN-VKLGDFG--ASKRLQTIC 160

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L++LH   +++RD+K  NILL   G  +KL DFG
Sbjct: 118 LSYLHSRKIIHRDIKPSNILLTRKGQ-VKLCDFG 150

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 38.5 bits (89), Expect = 4e-04
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 58  NSILRFLLLLLCAGDAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           N  L   L+ L +   C  L ++H   + +RDLK  N+L+D     LKL DFG
Sbjct: 164 NHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG 216

Length = 440

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 38.2 bits (89), Expect = 4e-04
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           F+  +LC     L ++H   V++RDLK  N+L++A    LK+ DFG
Sbjct: 110 FIYQILCG----LKYIHSANVLHRDLKPGNLLVNADCE-LKICDFG 150

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 60  ILRFLLLLLCAGDACLTFLH-RHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           I R L  LL A   C       + V++RDLK  NI LDA  + +KL DFG
Sbjct: 107 IWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNN-VKLGDFG 155

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 4/41 (9%)

Query: 68  LCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +  G   L  LHR   VYRDLK +NILLD  G  ++++D G
Sbjct: 111 ILCG---LEDLHRENTVYRDLKPENILLDDYGH-IRISDLG 147

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG--RCARKK 114
           FL  LL      L ++H   V++RDLK  N+L++     L++ DFG  R     
Sbjct: 112 FLYQLLRG----LKYIHSANVIHRDLKPSNLLVN-EDCELRIGDFGMARGLSSS 160

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 38.3 bits (89), Expect = 4e-04
 Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH  G+++RD+K  NIL+D  G  +K++DFG
Sbjct: 119 LNYLHNRGIIHRDIKGANILVDNKGG-IKISDFG 151

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 38.1 bits (88), Expect = 4e-04
 Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)

Query: 78  LHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           +H+   V+RD+K DNIL+D  G  ++LADFG C +
Sbjct: 118 VHQLHYVHRDIKPDNILMDMNGH-IRLADFGSCLK 151

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 38.1 bits (88), Expect = 4e-04
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKI 115
           L + HR  V++RDLK  N+L++  G  LKLADFG    K I
Sbjct: 117 LNYCHRRKVLHRDLKPQNLLINERGE-LKLADFGLARAKSI 156

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 16/32 (50%), Positives = 25/32 (78%), Gaps = 1/32 (3%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +LH + +++RD+K  NIL+D  G +LK+ADFG
Sbjct: 130 YLHENHILHRDIKAANILIDNQG-ILKIADFG 160

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 37.9 bits (88), Expect = 5e-04
 Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L  LH+  +VYRDLK +N+LLD  G+ ++++D G
Sbjct: 108 LEHLHQRRIVYRDLKPENVLLDDHGN-VRISDLG 140

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 37.8 bits (88), Expect = 6e-04
 Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + F H H +++RD+K +NIL+   G ++KL DFG
Sbjct: 113 IEFCHSHNIIHRDIKPENILVSQSG-VVKLCDFG 145

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 37.4 bits (87), Expect = 6e-04
 Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L + H+   ++RD+K  NILL+  G  +KLADFG
Sbjct: 129 LNYCHKKNFLHRDIKCSNILLNNKGQ-IKLADFG 161

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 37.7 bits (87), Expect = 7e-04
 Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK 114
           L + HR  V++RDLK  N+L++  G  LKLADFG  AR K
Sbjct: 117 LAYCHRRKVLHRDLKPQNLLINERGE-LKLADFG-LARAK 154

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 37.1 bits (86), Expect = 0.001
 Identities = 15/34 (44%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L  LH+  ++YRDLK +N+LLD  G+ ++++D G
Sbjct: 110 LEHLHQRRIIYRDLKPENVLLDNDGN-VRISDLG 142

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 37.0 bits (86), Expect = 0.001
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + F H+H  ++RD+K +NIL+   G  +KL DFG
Sbjct: 113 VNFCHKHNCIHRDVKPENILITKQG-QIKLCDFG 145

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 4/41 (9%)

Query: 68  LCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +C G   L  LH+  +VYRDLK +NILLD  G  ++++D G
Sbjct: 111 ICCG---LEDLHQERIVYRDLKPENILLDDHGH-IRISDLG 147

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLF 118
            L  +LC     +  LH  G+++RDLK  NI++ +  + LK+ DFG  AR     F
Sbjct: 123 LLYQMLCG----IKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG-LARTAGTSF 172

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L +LH  G ++RD+K  NILL   G  +KLADFG  A+
Sbjct: 119 LAYLHSKGKMHRDIKGANILLTDNGD-VKLADFGVAAK 155

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 2/40 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK 114
           L++ H+  +++RDLK  N+L++  G  LKLADFG  AR K
Sbjct: 116 LSYCHKRKILHRDLKPQNLLINEKGE-LKLADFG-LARAK 153

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 4/41 (9%)

Query: 68  LCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +  G   L  LHR  +VYRDLK +NILLD  G  ++++D G
Sbjct: 111 ITCG---LEDLHRERIVYRDLKPENILLDDYGH-IRISDLG 147

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 12/22 (54%), Positives = 16/22 (72%)

Query: 30 DFHFIKVLGKGSFGKELFGHYR 51
          DF+F+ VLGKGSFGK +    +
Sbjct: 1  DFNFLMVLGKGSFGKVMLAERK 22

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 57  TNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
              I R  + L   G   L  LH   +++RDLK  NILL A   L+K+ D G
Sbjct: 102 EQEIWRIFIQL-LRG---LQALHEQKILHRDLKSANILLVAND-LVKIGDLG 148

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 4/41 (9%)

Query: 68  LCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           LC G   L  L R  +VYRDLK +NILLD  G  ++++D G
Sbjct: 111 LCCG---LEDLQRERIVYRDLKPENILLDDRGH-IRISDLG 147

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L+ LH+H V++RD+K  N+LL      +KL DFG  A+
Sbjct: 124 LSHLHQHKVIHRDIKGQNVLLTENAE-VKLVDFGVSAQ 160

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 35.7 bits (83), Expect = 0.003
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H   V++RDLK  N+LL+     LK+ DFG
Sbjct: 119 LKYIHSANVLHRDLKPSNLLLNTNCD-LKICDFG 151

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 35.9 bits (83), Expect = 0.003
 Identities = 13/34 (38%), Positives = 22/34 (64%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H   V++RDLK  N+ ++    +LK+ DFG
Sbjct: 127 LKYIHSANVLHRDLKPANVFINTEDLVLKIGDFG 160

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKI 115
           L+++H+  +++RDLK  N+L+   G  LKLADFG    K +
Sbjct: 116 LSYIHQRYILHRDLKPQNLLISDTGE-LKLADFGLARAKSV 155

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)

Query: 59  SILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           +I+R +L         L  LH  G+V+RD+K  NI+   G    K+ D G  A
Sbjct: 259 TIMRQIL-------FALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAA 304

Length = 566

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L +LH  G ++RD+K  NILL   G  +KLADFG  A+
Sbjct: 119 LYYLHSKGKMHRDIKGANILLTDNGH-VKLADFGVSAQ 155

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)

Query: 65  LLLLCAGDAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            LLL +   C  + +L     ++RDL   NIL+++   L+K++DFG
Sbjct: 110 RLLLFSSQICKGMDYLGSQRYIHRDLAARNILVES-EDLVKISDFG 154

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           FL  LL A    L ++H   V +RDLK  NIL +A    LK+ DFG
Sbjct: 108 FLYQLLRA----LKYIHTANVFHRDLKPKNILANADCK-LKICDFG 148

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 35.4 bits (82), Expect = 0.004
 Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H   V++RDLK  N+LL+A    LK+ DFG
Sbjct: 121 LKYIHSANVLHRDLKPSNLLLNA-NCDLKICDFG 153

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 35.4 bits (82), Expect = 0.004
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 81  HGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
             +++RD+K  NILLD  G+ +KL DFG  
Sbjct: 127 LKIIHRDVKPSNILLDRNGN-IKLCDFGIS 155

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	127
KOG0598|consensus	357		99.92
KOG0694|consensus	694		99.9
KOG0616|consensus	355		99.87
KOG0605|consensus	550		99.86
KOG0595|consensus	429		99.86
KOG0581|consensus	364		99.85
KOG0592|consensus	604		99.85
KOG0615|consensus	475		99.85
KOG0593|consensus	396		99.82
KOG0690|consensus	516		99.81
KOG0591|consensus	375		99.79
KOG0696|consensus	683		99.79
KOG0663|consensus	419		99.78
KOG0575|consensus	592		99.77
KOG0193|consensus	678		99.77
KOG0580|consensus	281		99.77
KOG0614|consensus	732		99.76
KOG0661|consensus	538		99.76
KOG0659|consensus	318		99.76
KOG0658|consensus	364		99.75
KOG0612|consensus	1317		99.75
KOG0600|consensus	560		99.74
KOG0583|consensus	370		99.74
KOG0197|consensus	468		99.73
KOG0695|consensus	593		99.72
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.72
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.72
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.71
KOG0585|consensus	576		99.71
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.7
KOG0194|consensus	474		99.7
KOG0608|consensus	1034		99.69
KOG0611|consensus	668		99.69
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.69
KOG0597|consensus	808		99.69
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.69
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.68
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.68
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.68
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.68
KOG0594|consensus	323		99.68
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.68
KOG4250|consensus	732		99.68
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.68
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.68
KOG0192|consensus	362		99.68
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.67
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.67
PRK09188	365	serine/threonine protein kinase; Provisional	99.67
KOG0198|consensus	313		99.67
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.67
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.67
KOG0582|consensus	516		99.66
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.66
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.66
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.66
KOG0201|consensus	467		99.66
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.65
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.65
PHA02882	294	putative serine/threonine kinase; Provisional	99.64
KOG0589|consensus	426		99.64
KOG0588|consensus	786		99.64
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.64
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.64
PHA03212	391	serine/threonine kinase US3; Provisional	99.64
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.64
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.63
KOG0610|consensus	459		99.63
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.63
PTZ00283	496	serine/threonine protein kinase; Provisional	99.63
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.63
PHA03210	501	serine/threonine kinase US3; Provisional	99.63
KOG1989|consensus	738		99.63
KOG0667|consensus	586		99.63
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.63
KOG0586|consensus	596		99.62
PTZ00036	440	glycogen synthase kinase; Provisional	99.62
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.62
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.62
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.62
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.61
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.61
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.61
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.61
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.61
KOG0577|consensus	948		99.61
KOG0986|consensus	591		99.61
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.61
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.6
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.6
KOG0662|consensus	292		99.6
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.6
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.6
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.6
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.6
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.6
KOG0574|consensus	502		99.6
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.59
KOG0032|consensus	382		99.59
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.59
KOG0579|consensus	1187		99.59
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.59
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.59
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.59
KOG0578|consensus	550		99.59
PHA03209	357	serine/threonine kinase US3; Provisional	99.59
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.59
PTZ00267	478	NIMA-related protein kinase; Provisional	99.59
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.58
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.58
KOG1035|consensus	1351		99.58
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.58
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.58
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.58
KOG1345|consensus	378		99.58
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.58
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.58
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.57
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.57
KOG4236|consensus	888		99.57
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.57
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.57
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.57
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.57
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.57
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.57
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.56
PHA03207	392	serine/threonine kinase US3; Provisional	99.56
KOG0660|consensus	359		99.56
KOG4645|consensus	1509		99.56
KOG4721|consensus	904		99.56
KOG4279|consensus	1226		99.56
KOG0664|consensus	449		99.56
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.56
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.55
KOG0033|consensus	355		99.55
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.55
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.55
KOG0599|consensus	411		99.55
PTZ00284	467	protein kinase; Provisional	99.54
KOG1006|consensus	361		99.54
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.54
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.54
KOG0984|consensus	282		99.54
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.54
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.54
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.54
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.53
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.53
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.53
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.53
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.53
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.53
KOG0983|consensus	391		99.52
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.52
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.52
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.52
KOG1163|consensus	341		99.52
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.52
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.52
PHA03211	461	serine/threonine kinase US3; Provisional	99.52
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.52
KOG1095|consensus	1025		99.52
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.52
KOG1187|consensus	361		99.52
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.52
KOG0587|consensus	953		99.51
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.51
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.51
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.51
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.5
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.5
KOG0668|consensus	338		99.5
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.5
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.5
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.5
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.5
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.5
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.49
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.49
KOG1152|consensus	772		99.49
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.49
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.49
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.49
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.49
KOG0604|consensus	400		99.48
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.48
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.48
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.48
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.48
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.48
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.48
KOG0196|consensus	996		99.48
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.48
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.48
KOG0666|consensus	438		99.47
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.47
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.47
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.47
KOG4257|consensus	974		99.47
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.47
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.47
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.47
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.47
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.47
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.47
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.47
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.46
KOG1165|consensus	449		99.46
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.46
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.46
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.46
KOG4278|consensus	1157		99.46
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.46
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.46
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.46
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.45
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.45
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.45
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.45
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.45
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.45
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.44
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.44
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.44
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.44
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.44
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.44
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.44
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.44
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.44
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.44
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.43
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.43
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.43
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.43
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.43
KOG0596|consensus	677		99.43
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.43
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.43
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.43
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.42
KOG0669|consensus	376		99.42
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.42
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.42
KOG2052|consensus	513		99.42
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.42
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.41
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.41
KOG1026|consensus	774		99.41
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.41
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.41
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.41
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.41
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.41
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.4
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.4
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.4
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.4
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.4
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.4
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.4
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.4
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.4
KOG1094|consensus	807		99.4
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.39
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.39
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.39
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.39
KOG4717|consensus	864		99.38
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.38
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.38
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.38
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.38
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.38
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.38
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.37
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.37
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.37
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.37
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.37
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.37
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.37
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.37
KOG1025|consensus	1177		99.37
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.37
KOG0199|consensus	1039		99.36
PLN00009	294	cyclin-dependent kinase A; Provisional	99.36
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.36
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.36
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.36
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.36
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.36
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.36
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.35
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.35
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.35
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.35
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.35
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.35
KOG0603|consensus	612		99.35
PRK12274	218	serine/threonine protein kinase; Provisional	99.35
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.34
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.34
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.34
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.34
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.33
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.33
KOG0576|consensus	829		99.33
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.33
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.33
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.33
KOG2345|consensus	302		99.33
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.33
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.33
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.33
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.33
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.33
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.32
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.32
KOG3653|consensus	534		99.32
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.32
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.32
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.32
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.32
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.32
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.32
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.31
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.31
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.31
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.31
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.31
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.31
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.31
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.3
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.3
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.3
KOG1164|consensus	322		99.3
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.3
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.29
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.29
KOG0607|consensus	463		99.29
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.29
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.29
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.29
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.28
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.28
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.28
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.28
KOG1167|consensus	418		99.27
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.27
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.27
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.27
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.27
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.27
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.26
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.26
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.26
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.26
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.26
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.25
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.25
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.25
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.25
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.24
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.24
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.24
KOG0584|consensus	632		99.23
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.23
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.23
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.23
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.23
PHA02988	283	hypothetical protein; Provisional	99.23
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.23
smart00090	237	RIO RIO-like kinase.	99.23
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.22
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.22
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.21
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.21
PRK14879	211	serine/threonine protein kinase; Provisional	99.21
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.21
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.2
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.2
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.2
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.19
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.19
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.19
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.19
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.18
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.18
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.17
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.17
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.14
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.13
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.13
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.13
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.13
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.13
KOG0671|consensus	415		99.13
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.12
KOG0200|consensus	609		99.12
KOG1166|consensus	974		99.12
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.12
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.1
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.1
KOG1151|consensus	775		99.1
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.09
KOG1027|consensus	903		99.08
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.07
PRK10345	210	hypothetical protein; Provisional	99.06
KOG0665|consensus	369		99.05
KOG0670|consensus	752		98.99
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.94
KOG1290|consensus	590		98.92
KOG1024|consensus	563		98.91
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.83
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.79
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.79
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.79
KOG0606|consensus	1205		98.75
PLN00181	793	protein SPA1-RELATED; Provisional	98.74
KOG4158|consensus	598		98.73
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.68
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.67
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.58
KOG0590|consensus	601		98.56
KOG0603|consensus	612		98.54
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.44
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.42
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.21
KOG1240|consensus	1431		98.19
KOG3087|consensus	229		98.18
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.16
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.93
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.83
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.65
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.56
KOG0590|consensus	601		97.38
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.35
KOG0601|consensus	524		97.28
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	97.05
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.88
KOG0601|consensus	524		96.71
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.38
KOG1033|consensus	516		96.33
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.26
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.6
PRK09902	216	hypothetical protein; Provisional	95.56
KOG1023|consensus	484		95.54
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	94.96
PRK05231	319	homoserine kinase; Provisional	94.94
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	94.87
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	94.86
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	94.46
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.32
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	94.28
PF01636	239	APH: Phosphotransferase enzyme family This family	94.19
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	94.14
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	94.02
COG0661	517	AarF Predicted unusual protein kinase [General fun	93.96
KOG1235|consensus	538		93.36
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	93.32
KOG2137|consensus	700		93.11
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	93.08
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	92.96
PLN02236	344	choline kinase	92.78
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	92.64
PHA03111	444	Ser/Thr kinase; Provisional	92.42
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	92.36
PRK10271	188	thiK thiamine kinase; Provisional	92.01
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	91.83
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	91.78
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	91.57
COG2334	331	Putative homoserine kinase type II (protein kinase	91.25
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	90.95
KOG0606|consensus	1205		90.79
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	90.01
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	89.33
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	88.69
PRK06148	1013	hypothetical protein; Provisional	87.21
KOG2268|consensus	465		86.51
KOG1243|consensus	690		86.38
PRK11768	325	serine/threonine protein kinase; Provisional	85.5
PRK09550	401	mtnK methylthioribose kinase; Reviewed	85.08
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	84.47
KOG0195|consensus	448		84.42
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	84.36
PRK06149	972	hypothetical protein; Provisional	84.03
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	82.99
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	82.95

>KOG0598|consensus

Probab=99.92  E-value=1.5e-25  Score=163.07  Aligned_cols=98  Identities=42%  Similarity=0.746  Sum_probs=80.4

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------------cccC-----chhHHHHHHH------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------------ITND-----TNSILRFLLL------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~~-----~~~~~~~~~~------------------   66 (127)
                      .....++|+++++||+|+||+||+++.++              +...     ...|+.++..                  
T Consensus        20 ~~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~k   99 (357)
T KOG0598|consen   20 EMVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEK   99 (357)
T ss_pred             ccCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCe
Confidence            45678999999999999999999999987              1111     1133333333                  


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee----
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR----  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~----  112 (127)
                            |+.||+                        .||.|||+++||||||||+|||++.++. ++|+|||+++.    
T Consensus       100 LylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GH-i~LtDFgL~k~~~~~  178 (357)
T KOG0598|consen  100 LYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGH-IKLTDFGLCKEDLKD  178 (357)
T ss_pred             EEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCc-EEEeccccchhcccC
Confidence                  777776                        8999999999999999999999999999 99999999997    


Q ss_pred             -cCcccceeeE
Q psy7471         113 -KKIKLFCDLL  122 (127)
Q Consensus       113 -~~~~~~~gt~  122 (127)
                       ..+.++|||.
T Consensus       179 ~~~t~tfcGT~  189 (357)
T KOG0598|consen  179 GDATRTFCGTP  189 (357)
T ss_pred             CCccccccCCc
Confidence             3567899995

>KOG0694|consensus

Probab=99.90  E-value=1e-24  Score=168.57  Aligned_cols=97  Identities=44%  Similarity=0.848  Sum_probs=81.9

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc--------------cccC------------------------------chhH
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS--------------ITND------------------------------TNSI   60 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~~------------------------------~~~~   60 (127)
                      .+.+++|.++++||+|+||+|+++..+.              +..+                              ....
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            6788999999999999999999999987              1111                              1233


Q ss_pred             HHHHHHhhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee-----
Q psy7471          61 LRFLLLLLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----  112 (127)
Q Consensus        61 ~~~~~~~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~-----  112 (127)
                      ++++|+|+.||+                       .||.|||.++||+||||.+|||+|..+. +||+|||++|+     
T Consensus       444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh-~kiADFGlcKe~m~~g  522 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGH-VKIADFGLCKEGMGQG  522 (694)
T ss_pred             EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCc-EEecccccccccCCCC
Confidence            333444888887                       7999999999999999999999999999 99999999999     


Q ss_pred             cCcccceeeE
Q psy7471         113 KKIKLFCDLL  122 (127)
Q Consensus       113 ~~~~~~~gt~  122 (127)
                      ..++|||||.
T Consensus       523 ~~TsTfCGTp  532 (694)
T KOG0694|consen  523 DRTSTFCGTP  532 (694)
T ss_pred             CccccccCCh
Confidence            3478999996

>KOG0616|consensus

Probab=99.87  E-value=2.1e-22  Score=143.90  Aligned_cols=96  Identities=34%  Similarity=0.601  Sum_probs=81.3

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc-------------------cccCchhHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS-------------------ITNDTNSILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------------~~~~~~~~~~~~~~--------------------   66 (127)
                      ..+++|+..+.||.|+||.|.+++.+.                   ......+|++++..                    
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly  120 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY  120 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence            778999999999999999999999987                   11222344444443                    


Q ss_pred             ----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee--cCcc
Q psy7471          67 ----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR--KKIK  116 (127)
Q Consensus        67 ----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~--~~~~  116 (127)
                          |+.||+                        .|++|||+++|++|||||+|+|+|.++. +||+|||+|+.  ..++
T Consensus       121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~-iKitDFGFAK~v~~rT~  199 (355)
T KOG0616|consen  121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGH-IKITDFGFAKRVSGRTW  199 (355)
T ss_pred             EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCc-EEEEeccceEEecCcEE
Confidence                667776                        8999999999999999999999999999 99999999998  5578


Q ss_pred             cceeeE
Q psy7471         117 LFCDLL  122 (127)
Q Consensus       117 ~~~gt~  122 (127)
                      |+|||.
T Consensus       200 TlCGTP  205 (355)
T KOG0616|consen  200 TLCGTP  205 (355)
T ss_pred             EecCCc
Confidence            999985

>KOG0605|consensus

Probab=99.86  E-value=3.7e-23  Score=156.52  Aligned_cols=89  Identities=34%  Similarity=0.648  Sum_probs=74.7

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc-------------------------------------------cccCchh
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------------------------------------------ITNDTNS   59 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------------------------------------~~~~~~~   59 (127)
                      +..+..++|+++.+||+|+||.||+|+.+.                                           -.+++..
T Consensus       135 R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~  214 (550)
T KOG0605|consen  135 RTRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE  214 (550)
T ss_pred             cccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC
Confidence            346788999999999999999999999987                                           1112223


Q ss_pred             HHHHHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          60 ILRFLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        60 ~~~~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++++|+|+.||+                        .|+..+|..|+|||||||+|+|+|..+. +||+||||+.-
T Consensus       215 ~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GH-iKLSDFGLs~g  290 (550)
T KOG0605|consen  215 YLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGH-IKLSDFGLSTG  290 (550)
T ss_pred             eeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCC-Eeeccccccch
Confidence            3444455889998                        7899999999999999999999999999 99999999954

>KOG0595|consensus

Probab=99.86  E-value=1.6e-22  Score=149.21  Aligned_cols=96  Identities=31%  Similarity=0.493  Sum_probs=78.0

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cccC---------chhHHHHHHH----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITND---------TNSILRFLLL----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~---------~~~~~~~~~~----------------------   66 (127)
                      ...+|.+.+.||+|+||+||+|+++.         +...         ...|+.|+.+                      
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence            46789999999999999999999987         1111         1255666555                      


Q ss_pred             --hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecC------CCeEEEEeccccee--
Q psy7471          67 --LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAG------GSLLKLADFGRCAR--  112 (127)
Q Consensus        67 --~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~------~~~~kl~dfg~a~~--  112 (127)
                        ||.+|+                        .|+++||+++||||||||.|||+...      .. +||+|||+||.  
T Consensus        88 MEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~-LKIADFGfAR~L~  166 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPV-LKIADFGFARFLQ  166 (429)
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCce-EEecccchhhhCC
Confidence              888888                        78999999999999999999999875      23 89999999998  


Q ss_pred             --cCcccceeeEE
Q psy7471         113 --KKIKLFCDLLI  123 (127)
Q Consensus       113 --~~~~~~~gt~~  123 (127)
                        .+..++||+..
T Consensus       167 ~~~~a~tlcGSpl  179 (429)
T KOG0595|consen  167 PGSMAETLCGSPL  179 (429)
T ss_pred             chhHHHHhhCCcc
Confidence              44578899854

>KOG0581|consensus

Probab=99.85  E-value=3.5e-22  Score=145.72  Aligned_cols=98  Identities=23%  Similarity=0.376  Sum_probs=81.4

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc-----------------------------------------cccCchh-HHH
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS-----------------------------------------ITNDTNS-ILR   62 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~-----------------------------------------~~~~~~~-~~~   62 (127)
                      .+..++++...+||+|..|+||+|+|+.                                         -.+..+. ++.
T Consensus        75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~is  154 (364)
T KOG0581|consen   75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEIS  154 (364)
T ss_pred             ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEE
Confidence            4555688999999999999999999986                                         0011123 577


Q ss_pred             HHHHhhcchh------------------------HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee---cC
Q psy7471          63 FLLLLLCAGD------------------------ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR---KK  114 (127)
Q Consensus        63 ~~~~~~~~g~------------------------~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~---~~  114 (127)
                      |+||||.+|+                        .|+.|||+ ++||||||||.|+|+...+. +||||||.++.   ..
T Consensus       155 I~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGe-VKicDFGVS~~lvnS~  233 (364)
T KOG0581|consen  155 ICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGE-VKICDFGVSGILVNSI  233 (364)
T ss_pred             eehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCC-EEeccccccHHhhhhh
Confidence            7888999988                        78999996 89999999999999999999 99999999998   45


Q ss_pred             cccceeeEE
Q psy7471         115 IKLFCDLLI  123 (127)
Q Consensus       115 ~~~~~gt~~  123 (127)
                      ..+|.||..
T Consensus       234 a~tfvGT~~  242 (364)
T KOG0581|consen  234 ANTFVGTSA  242 (364)
T ss_pred             ccccccccc
Confidence            578888753

>KOG0592|consensus

Probab=99.85  E-value=6.3e-22  Score=150.28  Aligned_cols=87  Identities=38%  Similarity=0.650  Sum_probs=73.2

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc--------------------------------------------cccCchhH
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS--------------------------------------------ITNDTNSI   60 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------------------------------------~~~~~~~~   60 (127)
                      .....+|++++.||+|+|.+|++|+.+.                                            ..++++..
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            4566899999999999999999999987                                            11223334


Q ss_pred             HHHHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          61 LRFLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        61 ~~~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ++++++|+.+|+                        .|++|||++|||||||||+|||++.++. ++|+|||.|+.
T Consensus       149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmh-ikITDFGsAK~  223 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGH-IKITDFGSAKI  223 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCc-EEEeecccccc
Confidence            444455777777                        8999999999999999999999999999 99999999887

>KOG0615|consensus

Probab=99.85  E-value=2.6e-21  Score=143.19  Aligned_cols=100  Identities=27%  Similarity=0.436  Sum_probs=80.2

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc---------------cc--------cCchhHHHHHHH-------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------------IT--------NDTNSILRFLLL-------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------------~~--------~~~~~~~~~~~~-------------   66 (127)
                      .++...+-|.+.+.||+|+||.|.+|..+.               ..        .+..+|+++++.             
T Consensus       166 ~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f  245 (475)
T KOG0615|consen  166 PPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF  245 (475)
T ss_pred             ccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee
Confidence            344466779999999999999999998877               00        011256666655             


Q ss_pred             -----------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecC---CCeEEEEecc
Q psy7471          67 -----------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAG---GSLLKLADFG  108 (127)
Q Consensus        67 -----------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~---~~~~kl~dfg  108 (127)
                                 |+.||+                        .|+.|||+.||+||||||+|||+..+   .. +||+|||
T Consensus       246 ~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~l-lKItDFG  324 (475)
T KOG0615|consen  246 EVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCL-LKITDFG  324 (475)
T ss_pred             ecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceE-EEecccc
Confidence                       777877                        89999999999999999999999877   44 8999999


Q ss_pred             ccee----cCcccceeeEE
Q psy7471         109 RCAR----KKIKLFCDLLI  123 (127)
Q Consensus       109 ~a~~----~~~~~~~gt~~  123 (127)
                      +|+.    ....|+|||+.
T Consensus       325 lAK~~g~~sfm~TlCGTps  343 (475)
T KOG0615|consen  325 LAKVSGEGSFMKTLCGTPS  343 (475)
T ss_pred             hhhccccceehhhhcCCcc
Confidence            9998    33479999985

>KOG0593|consensus

Probab=99.82  E-value=5.5e-21  Score=137.32  Aligned_cols=84  Identities=26%  Similarity=0.483  Sum_probs=67.5

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cccCc---------hhHHHHHHH-----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITNDT---------NSILRFLLL-----------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~~---------~~~~~~~~~-----------------------   66 (127)
                      |+.|+.+.++|+|+||+||+|+++.         +...+         .+|++++.+                       
T Consensus         1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF   80 (396)
T KOG0593|consen    1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF   80 (396)
T ss_pred             CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence            5788999999999999999999998         11111         155556555                       


Q ss_pred             -hhcc-----------h-h------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCA-----------G-D------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~-----------g-~------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       ||..           | +            .|+.|+|.+++||||+||+|||+..++. +||||||+|+.
T Consensus        81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gv-vKLCDFGFAR~  150 (396)
T KOG0593|consen   81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGV-VKLCDFGFART  150 (396)
T ss_pred             eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCc-EEeccchhhHh
Confidence             1111           1 1            7899999999999999999999999999 99999999997

>KOG0690|consensus

Probab=99.81  E-value=2.2e-21  Score=140.92  Aligned_cols=101  Identities=43%  Similarity=0.792  Sum_probs=80.7

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------------cccC-----------------------------c
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------------ITND-----------------------------T   57 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~~-----------------------------~   57 (127)
                      .....+.+++|..+++||+|.||+|.+|+.+.              ++..                             .
T Consensus       160 ~~~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt  239 (516)
T KOG0690|consen  160 KRKNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT  239 (516)
T ss_pred             cccceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc
Confidence            34456788999999999999999999999987              1110                             1


Q ss_pred             hhHHHHHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee-
Q psy7471          58 NSILRFLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-  112 (127)
Q Consensus        58 ~~~~~~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~-  112 (127)
                      +..+.++|+|..||+                        .|+.|||+++|+.||+|.+|+++|.++. +||+|||++++ 
T Consensus       240 ~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGH-IKitDFGLCKE~  318 (516)
T KOG0690|consen  240 QDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGH-IKITDFGLCKEE  318 (516)
T ss_pred             CceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCc-eEeeecccchhc
Confidence            111122333666666                        8999999999999999999999999999 99999999998 


Q ss_pred             ----cCcccceeeE
Q psy7471         113 ----KKIKLFCDLL  122 (127)
Q Consensus       113 ----~~~~~~~gt~  122 (127)
                          ....+||||.
T Consensus       319 I~~g~t~kTFCGTP  332 (516)
T KOG0690|consen  319 IKYGDTTKTFCGTP  332 (516)
T ss_pred             ccccceeccccCCh
Confidence                4468999985

>KOG0591|consensus

Probab=99.79  E-value=1.7e-20  Score=133.72  Aligned_cols=89  Identities=33%  Similarity=0.428  Sum_probs=75.5

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc-------------------------------------------cccCchhH
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS-------------------------------------------ITNDTNSI   60 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------------------------------------~~~~~~~~   60 (127)
                      ....+.+|++++.||+|+||.||++.+..                                           .....+.+
T Consensus        14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e   93 (375)
T KOG0591|consen   14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE   93 (375)
T ss_pred             CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch
Confidence            34567889999999999999999998865                                           11122233


Q ss_pred             -HHHHHHhhcchh----------------------------HHHHHHHH--CC--cEecCCCCCCEEEecCCCeEEEEec
Q psy7471          61 -LRFLLLLLCAGD----------------------------ACLTFLHR--HG--VVYRDLKLDNILLDAGGSLLKLADF  107 (127)
Q Consensus        61 -~~~~~~~~~~g~----------------------------~al~~lH~--~~--iih~dlk~~nil~~~~~~~~kl~df  107 (127)
                       ++|+++||.+|+                            .|+..||.  .+  ++||||||.||+++.++. +||.||
T Consensus        94 vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gv-vKLGDf  172 (375)
T KOG0591|consen   94 VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGV-VKLGDF  172 (375)
T ss_pred             hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCc-eeeccc
Confidence             889999999998                            79999999  45  999999999999999999 999999


Q ss_pred             ccceec
Q psy7471         108 GRCARK  113 (127)
Q Consensus       108 g~a~~~  113 (127)
                      |+++..
T Consensus       173 GL~r~l  178 (375)
T KOG0591|consen  173 GLGRFL  178 (375)
T ss_pred             hhHhHh
Confidence            999983

>KOG0696|consensus

Probab=99.79  E-value=1.5e-19  Score=134.84  Aligned_cols=100  Identities=44%  Similarity=0.799  Sum_probs=83.4

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc--------------ccc------------------------------Cc
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------------ITN------------------------------DT   57 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~------------------------------~~   57 (127)
                      ....+...+|.++.+||+|+||+|.+|..++              +++                              +.
T Consensus       342 ~~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT  421 (683)
T KOG0696|consen  342 KRDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT  421 (683)
T ss_pred             cccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh
Confidence            3446778899999999999999999998877              111                              11


Q ss_pred             hhHHHHHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee-
Q psy7471          58 NSILRFLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-  112 (127)
Q Consensus        58 ~~~~~~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~-  112 (127)
                      ...++++|+|+.+|+                        .||-|||+++||.||||..|++++..+. +||+|||++++ 
T Consensus       422 mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGH-iKi~DFGmcKEn  500 (683)
T KOG0696|consen  422 MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKEN  500 (683)
T ss_pred             hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCc-eEeeeccccccc
Confidence            244556667888888                        6788999999999999999999999999 99999999998 


Q ss_pred             ----cCcccceeeE
Q psy7471         113 ----KKIKLFCDLL  122 (127)
Q Consensus       113 ----~~~~~~~gt~  122 (127)
                          ..+.|||||.
T Consensus       501 i~~~~TTkTFCGTP  514 (683)
T KOG0696|consen  501 IFDGVTTKTFCGTP  514 (683)
T ss_pred             ccCCcceeeecCCC
Confidence                4568999985

>KOG0663|consensus

Probab=99.78  E-value=3.3e-20  Score=134.69  Aligned_cols=88  Identities=24%  Similarity=0.374  Sum_probs=70.6

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------------------------------------------cccCchhHH
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------------------------------------------ITNDTNSIL   61 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------------------------------------~~~~~~~~~   61 (127)
                      -+++.|+.++.|++|+||.||+|+.+.                                            ..-.....+
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i  152 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI  152 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence            456889999999999999999999987                                            000111334


Q ss_pred             HHHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceecC
Q psy7471          62 RFLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK  114 (127)
Q Consensus        62 ~~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~  114 (127)
                      +++|+||+..-                        .|+.|||.+-|+||||||.|+|+...+. +||+|||+||...
T Consensus       153 y~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~-lKiaDFGLAR~yg  228 (419)
T KOG0663|consen  153 YIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGI-LKIADFGLAREYG  228 (419)
T ss_pred             eeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCc-EEecccchhhhhc
Confidence            45555555422                        7899999999999999999999999999 9999999999843

>KOG0575|consensus

Probab=99.77  E-value=1.1e-19  Score=139.37  Aligned_cols=49  Identities=35%  Similarity=0.678  Sum_probs=44.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee-----cCcccceeeE
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFCDLL  122 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~-----~~~~~~~gt~  122 (127)
                      .|+.|||+++|||||||..|++++++.. +||+|||+|..     ..-.|+|||.
T Consensus       129 ~GlkYLH~~~IiHRDLKLGNlfL~~~~~-VKIgDFGLAt~le~~~Erk~TlCGTP  182 (592)
T KOG0575|consen  129 EGLKYLHSLGIIHRDLKLGNLFLNENMN-VKIGDFGLATQLEYDGERKKTLCGTP  182 (592)
T ss_pred             HHHHHHHhcCceecccchhheeecCcCc-EEecccceeeeecCcccccceecCCC
Confidence            6799999999999999999999999999 99999999987     2347999985

>KOG0193|consensus

Probab=99.77  E-value=1.1e-19  Score=139.58  Aligned_cols=91  Identities=22%  Similarity=0.394  Sum_probs=70.8

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------ccc-------CchhHH-----------------------H
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITN-------DTNSIL-----------------------R   62 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~-------~~~~~~-----------------------~   62 (127)
                      ...|++..+.+.+...||+|.||+||+|+|.+        ...       ...+|.                       .
T Consensus       384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~A  463 (678)
T KOG0193|consen  384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLA  463 (678)
T ss_pred             ccccccCHHHhhccceeccccccceeecccccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCcee
Confidence            35678888999999999999999999999987        000       000111                       1


Q ss_pred             HHHHhhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          63 FLLLLLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        63 ~~~~~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.++|++.+                         .|+.|||.++|||||||..||++..+.. |||.|||++..
T Consensus       464 IiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~k-VkIgDFGLatv  537 (678)
T KOG0193|consen  464 IITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLK-VKIGDFGLATV  537 (678)
T ss_pred             eeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCc-EEEecccceee
Confidence            2222444433                         7899999999999999999999999998 99999999875

>KOG0580|consensus

Probab=99.77  E-value=6e-20  Score=128.09  Aligned_cols=101  Identities=31%  Similarity=0.542  Sum_probs=77.0

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc--------cc--------------------c---------------Cch
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------IT--------------------N---------------DTN   58 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~--------------------~---------------~~~   58 (127)
                      ....+.+++|++++.||+|-||.||+|+.+.        +.                    +               .++
T Consensus        15 ~~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~   94 (281)
T KOG0580|consen   15 ATKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS   94 (281)
T ss_pred             cccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc
Confidence            3345789999999999999999999999987        00                    0               000


Q ss_pred             hHHHHHHHhhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          59 SILRFLLLLLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        59 ~~~~~~~~~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..++++++|...|+                          .|+.|+|.+++||||+||+|+|++..+. +|++|||=+-.
T Consensus        95 ~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~-lkiAdfGwsV~  173 (281)
T KOG0580|consen   95 KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGE-LKIADFGWSVH  173 (281)
T ss_pred             ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCC-eeccCCCceee
Confidence            11111122444443                          7899999999999999999999999999 99999997654


Q ss_pred             ---cCcccceeeEE
Q psy7471         113 ---KKIKLFCDLLI  123 (127)
Q Consensus       113 ---~~~~~~~gt~~  123 (127)
                         ..-.|+|||+-
T Consensus       174 ~p~~kR~tlcgt~d  187 (281)
T KOG0580|consen  174 APSNKRKTLCGTLD  187 (281)
T ss_pred             cCCCCceeeecccc
Confidence               55679999985

>KOG0614|consensus

Probab=99.76  E-value=4.8e-19  Score=134.45  Aligned_cols=98  Identities=37%  Similarity=0.603  Sum_probs=81.2

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc-------------------------------------------cccCchhHH
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS-------------------------------------------ITNDTNSIL   61 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------------------------------------~~~~~~~~~   61 (127)
                      .+.+.+++....||-|+||.|=++..+.                                           -...+....
T Consensus       416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv  495 (732)
T KOG0614|consen  416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV  495 (732)
T ss_pred             ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence            3566788899999999999998887765                                           111223455


Q ss_pred             HHHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee----c
Q psy7471          62 RFLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR----K  113 (127)
Q Consensus        62 ~~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~----~  113 (127)
                      +++++.|-||+                        +|++|||+++||.|||||+|++++.++. +||.|||+|+.    .
T Consensus       496 YmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy-~KLVDFGFAKki~~g~  574 (732)
T KOG0614|consen  496 YMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGY-LKLVDFGFAKKIGSGR  574 (732)
T ss_pred             hhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCc-eEEeehhhHHHhccCC
Confidence            56666677776                        8999999999999999999999999999 99999999998    7


Q ss_pred             CcccceeeEE
Q psy7471         114 KIKLFCDLLI  123 (127)
Q Consensus       114 ~~~~~~gt~~  123 (127)
                      +++|||||.-
T Consensus       575 KTwTFcGTpE  584 (732)
T KOG0614|consen  575 KTWTFCGTPE  584 (732)
T ss_pred             ceeeecCCcc
Confidence            7899999963

>KOG0661|consensus

Probab=99.76  E-value=5.8e-20  Score=137.97  Aligned_cols=87  Identities=30%  Similarity=0.587  Sum_probs=70.5

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc-------------------------------------------cccCchhHH
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS-------------------------------------------ITNDTNSIL   61 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------------------------------------~~~~~~~~~   61 (127)
                      .+.+++|.+.+.||.|+||.||+|+.+.                                           +..+.+..+
T Consensus         6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L   85 (538)
T KOG0661|consen    6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL   85 (538)
T ss_pred             hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence            4578899999999999999999999876                                           111111255


Q ss_pred             HHHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          62 RFLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        62 ~~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ++++|||...-                        .||+|+|.+|+.|||+||+|||+..+.. +||+|||+||+
T Consensus        86 ~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~-iKiaDFGLARe  159 (538)
T KOG0661|consen   86 YFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDV-IKIADFGLARE  159 (538)
T ss_pred             eeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccce-eEecccccccc
Confidence            55666554322                        7899999999999999999999998877 99999999998

>KOG0659|consensus

Probab=99.76  E-value=8.7e-19  Score=123.93  Aligned_cols=85  Identities=26%  Similarity=0.447  Sum_probs=67.1

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc------------------cccCchhHHHHHHH------------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS------------------ITNDTNSILRFLLL------------------------   66 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~------------------~~~~~~~~~~~~~~------------------------   66 (127)
                      ++|...+.||+|.||+||+|++..                  +....-+|+.++++                        
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            578889999999999999999876                  11112255555555                        


Q ss_pred             hhcch---------------h---------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceecC
Q psy7471          67 LLCAG---------------D---------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK  114 (127)
Q Consensus        67 ~~~~g---------------~---------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~  114 (127)
                      |+...               +         .|+.|||.+.|+|||+||.|+|+.+++. +||+|||+|+...
T Consensus        82 fm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~-lKiADFGLAr~f~  152 (318)
T KOG0659|consen   82 FMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQ-LKIADFGLARFFG  152 (318)
T ss_pred             eccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCc-EEeecccchhccC
Confidence            11110               0         7899999999999999999999999999 9999999999843

>KOG0658|consensus

Probab=99.75  E-value=7.3e-18  Score=123.12  Aligned_cols=40  Identities=40%  Similarity=0.747  Sum_probs=37.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+|+||||||.|+|+|.+...+||||||.|+.
T Consensus       136 rgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~  175 (364)
T KOG0658|consen  136 RGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV  175 (364)
T ss_pred             HHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence            8999999999999999999999998855599999999998

>KOG0612|consensus

Probab=99.75  E-value=7.4e-20  Score=148.00  Aligned_cols=87  Identities=39%  Similarity=0.685  Sum_probs=77.0

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc-------------------------------------------cccCchhHH
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS-------------------------------------------ITNDTNSIL   61 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------------------------------------~~~~~~~~~   61 (127)
                      .+..++|.+.++||+|+||.|.+++++.                                           ..++++..+
T Consensus        71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L  150 (1317)
T KOG0612|consen   71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL  150 (1317)
T ss_pred             hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence            4567899999999999999999999977                                           223455667


Q ss_pred             HHHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          62 RFLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        62 ~~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |++|+|++||+                        .|+..+|+.|+|||||||+|||+|..+. +||+|||.+-.
T Consensus       151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GH-ikLADFGsClk  224 (1317)
T KOG0612|consen  151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGH-IKLADFGSCLK  224 (1317)
T ss_pred             EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCc-EeeccchhHHh
Confidence            77888999998                        7899999999999999999999999999 99999998766

>KOG0600|consensus

Probab=99.74  E-value=1.7e-18  Score=130.82  Aligned_cols=85  Identities=29%  Similarity=0.453  Sum_probs=66.7

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cccC---------chhHHHHHHH----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITND---------TNSILRFLLL----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~---------~~~~~~~~~~----------------------   66 (127)
                      ..+.|+.++.||+|+||.||+|+...         +..+         ...|+.|+..                      
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            44678999999999999999999876         1111         1144444443                      


Q ss_pred             ----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                          ||...-                        .||+|||.++++|||||..|||++.++. +||+|||+|+.
T Consensus       195 lVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~-LKiaDFGLAr~  267 (560)
T KOG0600|consen  195 LVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGV-LKIADFGLARF  267 (560)
T ss_pred             EEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCC-EEeccccceee
Confidence                222211                        7899999999999999999999999999 99999999996

>KOG0583|consensus

Probab=99.74  E-value=8.6e-18  Score=125.74  Aligned_cols=98  Identities=36%  Similarity=0.610  Sum_probs=77.7

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc--------cccC-------------chhHHHHHHH-----------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND-------------TNSILRFLLL-----------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~-------------~~~~~~~~~~-----------------   66 (127)
                      ......|++.+.||+|+||+|+.|++..        +...             ...|+.++..                 
T Consensus        13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~   92 (370)
T KOG0583|consen   13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP   92 (370)
T ss_pred             ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence            3567889999999999999999998864        1000             0134433333                 


Q ss_pred             --------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecC-CCeEEEEecccceec
Q psy7471          67 --------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAG-GSLLKLADFGRCARK  113 (127)
Q Consensus        67 --------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~-~~~~kl~dfg~a~~~  113 (127)
                              |+.+|+                        .|++|||+++|+||||||+|++++.+ +. +||+|||++...
T Consensus        93 ~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~-~Kl~DFG~s~~~  171 (370)
T KOG0583|consen   93 TKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGN-LKLSDFGLSAIS  171 (370)
T ss_pred             CeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCC-EEEecccccccc
Confidence                    677765                        89999999999999999999999999 88 999999999853


Q ss_pred             -----CcccceeeEE
Q psy7471         114 -----KIKLFCDLLI  123 (127)
Q Consensus       114 -----~~~~~~gt~~  123 (127)
                           ...++|||..
T Consensus       172 ~~~~~~l~t~cGsp~  186 (370)
T KOG0583|consen  172 PGEDGLLKTFCGSPA  186 (370)
T ss_pred             CCCCCcccCCCCCcc
Confidence                 5678899864

>KOG0197|consensus

Probab=99.73  E-value=9.5e-19  Score=132.26  Aligned_cols=92  Identities=24%  Similarity=0.434  Sum_probs=75.8

Q ss_pred             CCCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------c------ccCchhHHHHHHH-------------------
Q psy7471          20 SGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------I------TNDTNSILRFLLL-------------------   66 (127)
Q Consensus        20 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~------~~~~~~~~~~~~~-------------------   66 (127)
                      ....|++..+.+++.+.||+|.||+||+|+|++        +      ..+...|..+|+.                   
T Consensus       197 ~~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi  276 (468)
T KOG0197|consen  197 ARDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI  276 (468)
T ss_pred             ccCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCce
Confidence            377888999999999999999999999999987        0      0111134444443                   


Q ss_pred             -----hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+..|+                          .|++||+++++|||||..+|||++.+.. +||+|||+||.
T Consensus       277 yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~-vKIsDFGLAr~  352 (468)
T KOG0197|consen  277 YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLV-VKISDFGLARL  352 (468)
T ss_pred             EEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCce-EEEcccccccc
Confidence                 555554                          7899999999999999999999999998 99999999996

>KOG0695|consensus

Probab=99.72  E-value=8.6e-19  Score=128.15  Aligned_cols=101  Identities=40%  Similarity=0.799  Sum_probs=81.3

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc-------------cccCch------hHHH-------------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------------ITNDTN------SILR-------------------   62 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------~~~~~~------~~~~-------------------   62 (127)
                      ...|.+.+++|+++++||+|+|++|.+++++.             ..++++      .|..                   
T Consensus       242 ~~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfq  321 (593)
T KOG0695|consen  242 KISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ  321 (593)
T ss_pred             ccccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhc
Confidence            45677889999999999999999999999987             111111      1111                   


Q ss_pred             ------HHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          63 ------FLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        63 ------~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            ++.+|+.+|+                        .|+.|||++|||.||||..|+|++..+. +||+|+|++++
T Consensus       322 tesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaegh-ikltdygmcke  400 (593)
T KOG0695|consen  322 TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGH-IKLTDYGMCKE  400 (593)
T ss_pred             ccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCc-eeecccchhhc
Confidence                  1222666666                        7899999999999999999999999999 99999999998


Q ss_pred             -----cCcccceeeE
Q psy7471         113 -----KKIKLFCDLL  122 (127)
Q Consensus       113 -----~~~~~~~gt~  122 (127)
                           ..++|||||.
T Consensus       401 ~l~~gd~tstfcgtp  415 (593)
T KOG0695|consen  401 GLGPGDTTSTFCGTP  415 (593)
T ss_pred             CCCCCcccccccCCC
Confidence                 4578999985

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.72  E-value=2.3e-18  Score=127.91  Aligned_cols=83  Identities=37%  Similarity=0.673  Sum_probs=64.9

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc--------ccc-----------CchhHHHHHH------------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS--------ITN-----------DTNSILRFLL------------------------   65 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~--------~~~-----------~~~~~~~~~~------------------------   65 (127)
                      ++|++.+.||+|+||+||+|+++.        +..           ....+..++.                        
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            579999999999999999998865        000           0012222322                        


Q ss_pred             Hhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          66 LLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        66 ~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +|+.+|+                        .||.|||+++|+||||||+||+++.++. ++|+|||+++.
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~-vkL~DFGla~~  150 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGH-VKLSDFGLCTG  150 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCC-EEEeeccCccc
Confidence            2555554                        7899999999999999999999999998 99999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.72  E-value=4.8e-18  Score=124.68  Aligned_cols=89  Identities=30%  Similarity=0.602  Sum_probs=69.7

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc---------ccc----------CchhHHHHHHH-----------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN----------DTNSILRFLLL-----------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----------~~~~~~~~~~~-----------------   66 (127)
                      ...+.+++|++.+.||+|+||.||+|+++.         +..          ....|..++..                 
T Consensus        12 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   91 (329)
T PTZ00263         12 TSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN   91 (329)
T ss_pred             cCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC
Confidence            445678999999999999999999999875         000          01123333332                 


Q ss_pred             -------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+.+|+                        .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus        92 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~-~kl~Dfg~~~~  167 (329)
T PTZ00263         92 RVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGH-VKVTDFGFAKK  167 (329)
T ss_pred             EEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCC-EEEeeccCceE
Confidence                   444443                        6899999999999999999999999999 99999999986

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.71  E-value=3.2e-18  Score=127.74  Aligned_cols=87  Identities=36%  Similarity=0.638  Sum_probs=67.5

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc--------cccC----c-------hhHHHHHH--------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND----T-------NSILRFLL--------------------   65 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~----~-------~~~~~~~~--------------------   65 (127)
                      ....++|++.+.||+|+||.||+++++.        ....    .       ..+..++.                    
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            3456889999999999999999999875        0000    0       01222222                    


Q ss_pred             ----Hhhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          66 ----LLLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        66 ----~~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                          +|+.+|+                       .||.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~-~kL~DFG~a~~  191 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGH-LKLADFGTCMK  191 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCC-EEEEeccccee
Confidence                2555554                       7899999999999999999999999999 99999999986

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0585|consensus

Probab=99.71  E-value=2.3e-18  Score=129.63  Aligned_cols=86  Identities=29%  Similarity=0.559  Sum_probs=68.9

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------cc----------------------cCchhHHHHHHH---------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------IT----------------------NDTNSILRFLLL---------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~----------------------~~~~~~~~~~~~---------   66 (127)
                      ..+++|++.+.||+|.||.|.+|+...        +.                      ..-..|+.|++.         
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            445779999999999999999998865        00                      011144445443         


Q ss_pred             -----------------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEE
Q psy7471          67 -----------------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLA  105 (127)
Q Consensus        67 -----------------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~  105 (127)
                                       ||..|.                        .||+|||..+||||||||.|+|++.++. +||+
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~-VKIs  252 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGT-VKIS  252 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCc-EEee
Confidence                             565554                        7899999999999999999999999999 9999


Q ss_pred             eccccee
Q psy7471         106 DFGRCAR  112 (127)
Q Consensus       106 dfg~a~~  112 (127)
                      |||.+-.
T Consensus       253 DFGVs~~  259 (576)
T KOG0585|consen  253 DFGVSNE  259 (576)
T ss_pred             ccceeee
Confidence            9999875

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.70  E-value=7.6e-18  Score=125.76  Aligned_cols=88  Identities=35%  Similarity=0.627  Sum_probs=68.3

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC----c-------hhHHHHHH-------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND----T-------NSILRFLL-------------------   65 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~----~-------~~~~~~~~-------------------   65 (127)
                      ..+..++|++.+.||+|+||.||+|+++.        ....    .       ..+..++.                   
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  117 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            45667899999999999999999999875        0000    0       01222222                   


Q ss_pred             -----Hhhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          66 -----LLLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        66 -----~~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           +|+.+|+                       .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       118 ~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~-ikL~DfG~a~~  191 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMK  191 (371)
T ss_pred             EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCC-EEEEeCCceeE
Confidence                 1455554                       7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0194|consensus

Probab=99.70  E-value=3.6e-18  Score=130.17  Aligned_cols=97  Identities=25%  Similarity=0.379  Sum_probs=77.0

Q ss_pred             CCCCCCCCCcccCCCeEEEEEeceeCCceEEEEEEccc-------------c----cCch------hHHHHHHH------
Q psy7471          16 GRGSSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRSI-------------T----NDTN------SILRFLLL------   66 (127)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~-------------~----~~~~------~~~~~~~~------   66 (127)
                      ..+.....|++.-++..+.++||+|+||.||+|+.+..             .    ...+      .|.+++..      
T Consensus       144 ~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NV  223 (474)
T KOG0194|consen  144 KRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNV  223 (474)
T ss_pred             cccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCE
Confidence            35667788999999999999999999999999988750             0    0011      22222222      


Q ss_pred             ------------------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEE
Q psy7471          67 ------------------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLK  103 (127)
Q Consensus        67 ------------------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~k  103 (127)
                                        +|.+|+                         .||+|||.+++|||||..+|+|++.... +|
T Consensus       224 Vr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~-vK  302 (474)
T KOG0194|consen  224 VRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGV-VK  302 (474)
T ss_pred             EEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCe-EE
Confidence                              566665                         7899999999999999999999999888 99


Q ss_pred             EEecccceec
Q psy7471         104 LADFGRCARK  113 (127)
Q Consensus       104 l~dfg~a~~~  113 (127)
                      |+|||+++..
T Consensus       303 ISDFGLs~~~  312 (474)
T KOG0194|consen  303 ISDFGLSRAG  312 (474)
T ss_pred             eCccccccCC
Confidence            9999998874

>KOG0608|consensus

Probab=99.69  E-value=1.1e-17  Score=129.93  Aligned_cols=86  Identities=33%  Similarity=0.563  Sum_probs=71.0

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc-------------------------------------------cccCchhHHH
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS-------------------------------------------ITNDTNSILR   62 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------------------------------------~~~~~~~~~~   62 (127)
                      ++-+-|..++.||-|+||+|.+++..+                                           ..+++...++
T Consensus       626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLY  705 (1034)
T KOG0608|consen  626 MDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY  705 (1034)
T ss_pred             ccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceE
Confidence            334558889999999999999998766                                           1122334455


Q ss_pred             HHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          63 FLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        63 ~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ++|+|+.||+                        .|+++.|..|.|||||||+|||||.++. +||+||||+.-
T Consensus       706 FVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGH-IKLTDFGLCTG  778 (1034)
T KOG0608|consen  706 FVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTG  778 (1034)
T ss_pred             EEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCc-eeeeecccccc
Confidence            6666899988                        7999999999999999999999999999 99999999763

>KOG0611|consensus

Probab=99.69  E-value=3.8e-19  Score=132.43  Aligned_cols=94  Identities=32%  Similarity=0.587  Sum_probs=74.5

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------cc----cC------chhHHHHHH------------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------IT----ND------TNSILRFLL------------------------   65 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~----~~------~~~~~~~~~------------------------   65 (127)
                      .+|++.+.||+|.||+|-+|+...         +.    .+      ...|++||.                        
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            568999999999999999998754         10    01      113444433                        


Q ss_pred             Hhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee----cCccc
Q psy7471          66 LLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR----KKIKL  117 (127)
Q Consensus        66 ~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~----~~~~~  117 (127)
                      +|..+|+                        .|+.|||.++++|||||.+|||+|.+++ +||+|||++..    ....|
T Consensus       133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~N-iKIADFGLSNly~~~kfLqT  211 (668)
T KOG0611|consen  133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNN-IKIADFGLSNLYADKKFLQT  211 (668)
T ss_pred             EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCC-eeeeccchhhhhccccHHHH
Confidence            3666665                        8999999999999999999999999999 99999999876    45689


Q ss_pred             ceeeEE
Q psy7471         118 FCDLLI  123 (127)
Q Consensus       118 ~~gt~~  123 (127)
                      |||+.+
T Consensus       212 FCGSPL  217 (668)
T KOG0611|consen  212 FCGSPL  217 (668)
T ss_pred             hcCCcc
Confidence            999865

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.69  E-value=9.2e-17  Score=118.68  Aligned_cols=92  Identities=35%  Similarity=0.661  Sum_probs=70.8

Q ss_pred             CCCCCcccCCCeEEEEEeceeCCceEEEEEEcc----------cc-----cCc-----hhHHHHHHH-------------
Q psy7471          20 SGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS----------IT-----NDT-----NSILRFLLL-------------   66 (127)
Q Consensus        20 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~----------~~-----~~~-----~~~~~~~~~-------------   66 (127)
                      +.....+..++|++.+.||+|+||.||+|.++.          +.     ...     ..|..++..             
T Consensus        21 ~~~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~  100 (340)
T PTZ00426         21 PKRKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF  100 (340)
T ss_pred             cccCCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence            344566788999999999999999999998653          00     000     023333322             


Q ss_pred             -----------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccce
Q psy7471          67 -----------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA  111 (127)
Q Consensus        67 -----------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~  111 (127)
                                 |+.+|+                        .|+.|||+++++||||||.|||++.++. ++|+|||+++
T Consensus       101 ~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~-ikL~DFG~a~  179 (340)
T PTZ00426        101 KDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGF-IKMTDFGFAK  179 (340)
T ss_pred             EeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCC-EEEecCCCCe
Confidence                       455544                        7899999999999999999999999998 9999999998


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      .
T Consensus       180 ~  180 (340)
T PTZ00426        180 V  180 (340)
T ss_pred             e
Confidence            6

>KOG0597|consensus

Probab=99.69  E-value=2.7e-18  Score=131.77  Aligned_cols=88  Identities=35%  Similarity=0.638  Sum_probs=69.1

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------c----ccC-----chhHHHHHHH-----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------I----TND-----TNSILRFLLL-----------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~----~~~-----~~~~~~~~~~-----------------------   66 (127)
                      |++|.+.+.||+|+||.||+|+.+.         +    ...     ...+++|+..                       
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt   80 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT   80 (808)
T ss_pred             CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence            5789999999999999999999887         0    001     1133444333                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceecCccc
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKL  117 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~~~~  117 (127)
                       |+.+ +                        .|+.|||+++|+|||+||.|||++..+. +|+||||+||.+.+.+
T Consensus        81 e~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~-~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen   81 EYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGT-LKLCDFGLARAMSTNT  154 (808)
T ss_pred             hhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCc-eeechhhhhhhcccCc
Confidence             3333 2                        7999999999999999999999999999 9999999999855543

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.69  E-value=9.3e-18  Score=124.13  Aligned_cols=88  Identities=25%  Similarity=0.416  Sum_probs=67.1

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc---------ccc--Cc------hhHHHHHH---------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN--DT------NSILRFLL---------------------   65 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~--~~------~~~~~~~~---------------------   65 (127)
                      .....++|+..+.||+|+||.||+|+++.         +..  ..      ..|+.++.                     
T Consensus        69 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  148 (353)
T PLN00034         69 AAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQ  148 (353)
T ss_pred             CCCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEE
Confidence            34456789999999999999999998864         100  00      12222222                     


Q ss_pred             ---Hhhcchh--------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          66 ---LLLCAGD--------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        66 ---~~~~~g~--------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                         +|+.+++                    .||.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       149 lv~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~-~kL~DfG~~~~  217 (353)
T PLN00034        149 VLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKN-VKIADFGVSRI  217 (353)
T ss_pred             EEEecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC-EEEccccccee
Confidence               2444443                    7899999999999999999999999998 99999999876

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.68  E-value=1.2e-17  Score=122.28  Aligned_cols=39  Identities=59%  Similarity=1.093  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++|+||||||+||+++.++. ++|+|||+++.
T Consensus       112 ~al~~lH~~~ivH~dlkp~Nill~~~~~-~kL~Dfg~~~~  150 (324)
T cd05587         112 IGLFFLHSKGIIYRDLKLDNVMLDAEGH-IKIADFGMCKE  150 (324)
T ss_pred             HHHHHHHHCCeEecCCCHHHeEEcCCCC-EEEeecCccee
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=1.4e-17  Score=124.16  Aligned_cols=83  Identities=39%  Similarity=0.672  Sum_probs=64.3

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------ccc----C------chhHHHHHHH-----------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------ITN----D------TNSILRFLLL-----------------------   66 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----~------~~~~~~~~~~-----------------------   66 (127)
                      ++|++.+.||+|+||.||+|+++.         +..    .      ...|..++..                       
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            479999999999999999998865         000    0      0122233222                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+|+                        .||.|||+++|+||||||+||+++.++. ++|+|||+++.
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~-~kl~DfGla~~  150 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGH-IKLSDFGLSTG  150 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCC-EEEeecccccc
Confidence             555544                        7899999999999999999999999998 99999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.68  E-value=1.5e-17  Score=122.17  Aligned_cols=39  Identities=44%  Similarity=0.791  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||.||+++.++. +||+|||+++.
T Consensus       113 ~~L~~lH~~~iiHrDlkp~Nill~~~~~-~kl~DfG~a~~  151 (331)
T cd05624         113 LAIHSIHQLHYVHRDIKPDNVLLDMNGH-IRLADFGSCLK  151 (331)
T ss_pred             HHHHHHHHCCeeeccCchHHEEEcCCCC-EEEEeccceee
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.68  E-value=1.2e-17  Score=122.22  Aligned_cols=39  Identities=56%  Similarity=1.082  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||+||+++.++. +||+|||+++.
T Consensus       112 ~aL~~LH~~~ivHrDlkp~Nill~~~~~-~kL~DfG~~~~  150 (323)
T cd05616         112 IGLFFLHSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKE  150 (323)
T ss_pred             HHHHHHHHCCEEecCCCHHHeEECCCCc-EEEccCCCcee
Confidence            7899999999999999999999999998 99999999886

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0594|consensus

Probab=99.68  E-value=1.2e-17  Score=121.41  Aligned_cols=39  Identities=51%  Similarity=0.848  Sum_probs=37.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||.|++++..+. +||+|||+|+.
T Consensus       131 ~gl~~~H~~~IlHRDLKPQNlLi~~~G~-lKlaDFGlAra  169 (323)
T KOG0594|consen  131 RGLAFLHSHGILHRDLKPQNLLISSSGV-LKLADFGLARA  169 (323)
T ss_pred             HHHHHHHhCCeecccCCcceEEECCCCc-EeeeccchHHH
Confidence            7899999999999999999999999999 99999999997

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.68  E-value=1.4e-17  Score=121.96  Aligned_cols=39  Identities=51%  Similarity=0.897  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. ++|+|||+++.
T Consensus       116 ~~l~~lH~~~ivHrDlkp~Nili~~~~~-~kl~DfG~~~~  154 (332)
T cd05614         116 LALEHLHKLGIVYRDIKLENILLDSEGH-VVLTDFGLSKE  154 (332)
T ss_pred             HHHHHHHHCCcEecCCCHHHeEECCCCC-EEEeeCcCCcc
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG4250|consensus

Probab=99.68  E-value=5.6e-17  Score=126.49  Aligned_cols=93  Identities=29%  Similarity=0.444  Sum_probs=68.8

Q ss_pred             CeEEEEEeceeCCceEEEEEEcc-----------------cccCchhHHHHHH---------------------------
Q psy7471          30 DFHFIKVLGKGSFGKELFGHYRS-----------------ITNDTNSILRFLL---------------------------   65 (127)
Q Consensus        30 ~~~~~~~lg~G~fg~V~~~~~~~-----------------~~~~~~~~~~~~~---------------------------   65 (127)
                      .+...+.||+|+||.||+++++.                 -...+..|+++++                           
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            34567899999999999999877                 0011124444443                           


Q ss_pred             ---Hhhcchh---------------------------HHHHHHHHCCcEecCCCCCCEEEecC--CC-eEEEEeccccee
Q psy7471          66 ---LLLCAGD---------------------------ACLTFLHRHGVVYRDLKLDNILLDAG--GS-LLKLADFGRCAR  112 (127)
Q Consensus        66 ---~~~~~g~---------------------------~al~~lH~~~iih~dlk~~nil~~~~--~~-~~kl~dfg~a~~  112 (127)
                         +||.+|+                           .|+.|||+++|+||||||.||++-..  +. .-||+|||.||.
T Consensus        94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are  173 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE  173 (732)
T ss_pred             EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence               3888887                           79999999999999999999997532  33 369999999998


Q ss_pred             cC----cccceeeE
Q psy7471         113 KK----IKLFCDLL  122 (127)
Q Consensus       113 ~~----~~~~~gt~  122 (127)
                      ..    ..+++||.
T Consensus       174 l~d~s~~~S~vGT~  187 (732)
T KOG4250|consen  174 LDDNSLFTSLVGTE  187 (732)
T ss_pred             CCCCCeeeeecCch
Confidence            33    45566663

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=2e-17  Score=122.58  Aligned_cols=83  Identities=37%  Similarity=0.668  Sum_probs=65.3

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------ccc-----C-----chhHHHHHHH-----------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------ITN-----D-----TNSILRFLLL-----------------------   66 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~~-----~-----~~~~~~~~~~-----------------------   66 (127)
                      ++|++.+.||+|+||.||+|+++.         +..     .     ...|..++..                       
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            479999999999999999999865         000     0     0123333332                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+|+                        .||.|||+++++||||||.||+++.++. ++|+|||+++.
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~-~kl~Dfg~~~~  150 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGH-IKLSDFGLCTG  150 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC-EEEeeccccee
Confidence             555554                        7899999999999999999999999999 99999999875

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.68  E-value=1.6e-17  Score=123.91  Aligned_cols=88  Identities=38%  Similarity=0.654  Sum_probs=68.5

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc---------ccc-----Cc-----hhHHHHHHH------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN-----DT-----NSILRFLLL------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~-----~~-----~~~~~~~~~------------------   66 (127)
                      ..+..++|++.+.||+|+||.||+|+++.         +..     ..     ..+..++..                  
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~  117 (370)
T cd05596          38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY  117 (370)
T ss_pred             CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            45667899999999999999999999875         100     00     012222222                  


Q ss_pred             ------hhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            |+.+|+                       .||.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~-~kL~DfG~~~~  191 (370)
T cd05596         118 LYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMK  191 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCC-EEEEeccceee
Confidence                  555554                       7899999999999999999999999999 99999999876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0192|consensus

Probab=99.68  E-value=7.2e-18  Score=125.66  Aligned_cols=90  Identities=34%  Similarity=0.613  Sum_probs=71.2

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc--------ccc---------CchhHHHHH--------------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITN---------DTNSILRFL--------------------   64 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~---------~~~~~~~~~--------------------   64 (127)
                      ..+.+..+.+.+.+.||+|+||+||+|.|++        +..         ....|..++                    
T Consensus        34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~  113 (362)
T KOG0192|consen   34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG  113 (362)
T ss_pred             cceecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            5567777888889999999999999999988        100         111222222                    


Q ss_pred             -----HHhhcchh--------------------------HHHHHHHHCC-cEecCCCCCCEEEecCC-CeEEEEecccce
Q psy7471          65 -----LLLLCAGD--------------------------ACLTFLHRHG-VVYRDLKLDNILLDAGG-SLLKLADFGRCA  111 (127)
Q Consensus        65 -----~~~~~~g~--------------------------~al~~lH~~~-iih~dlk~~nil~~~~~-~~~kl~dfg~a~  111 (127)
                           ++|+.+|+                          .|+.|||+++ ||||||||.|+|++.+. . +||+|||+++
T Consensus       114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~-~KI~DFGlsr  192 (362)
T KOG0192|consen  114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKT-LKIADFGLSR  192 (362)
T ss_pred             ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCE-EEECCCccce
Confidence                 23666665                          7899999999 99999999999999997 6 9999999998


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      .
T Consensus       193 ~  193 (362)
T KOG0192|consen  193 E  193 (362)
T ss_pred             e
Confidence            7

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.67  E-value=1.9e-17  Score=123.30  Aligned_cols=82  Identities=33%  Similarity=0.552  Sum_probs=64.3

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc--------ccc-----------CchhHHHHHHH-----------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS--------ITN-----------DTNSILRFLLL-----------------------   66 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~--------~~~-----------~~~~~~~~~~~-----------------------   66 (127)
                      ++|++.+.||+|+||.||+|+.+.        ...           ....|+.++..                       
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            479999999999999999999865        000           00123333332                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccce
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA  111 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~  111 (127)
                       |+.+|+                        .||.|||+++|+||||||+||+++.++. ++|+|||++.
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~-ikL~DFG~a~  149 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCT  149 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCC-EEEEeCCCCc
Confidence             555554                        7899999999999999999999999998 9999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.67  E-value=2e-17  Score=122.62  Aligned_cols=83  Identities=37%  Similarity=0.689  Sum_probs=64.3

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc--------ccc-----Cc------hhHHHHHHH-----------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS--------ITN-----DT------NSILRFLLL-----------------------   66 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~--------~~~-----~~------~~~~~~~~~-----------------------   66 (127)
                      ++|++.+.||+|+||.||+|+.+.        ...     ..      ..+..++..                       
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            579999999999999999998865        000     00      122222222                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+|+                        .|+.|||+++++||||||+||+++.++. ++|+|||+++.
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~-vkL~DfG~~~~  150 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGH-VKLSDFGLCTG  150 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCC-EEEeeccCCcc
Confidence             555554                        7899999999999999999999999998 99999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.67  E-value=6.5e-16  Score=115.32  Aligned_cols=92  Identities=23%  Similarity=0.242  Sum_probs=69.7

Q ss_pred             CCCCCcccCCCeEEEEEeceeCCceEEEEEEcc-------cc--c-------C------chhHHHHHHH-----------
Q psy7471          20 SGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------IT--N-------D------TNSILRFLLL-----------   66 (127)
Q Consensus        20 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~--~-------~------~~~~~~~~~~-----------   66 (127)
                      +..+.....+.|.+.++||+|+||+||+|+++.       +.  .       .      ...|..++..           
T Consensus         9 ~~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~   88 (365)
T PRK09188          9 PGDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLL   88 (365)
T ss_pred             cccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEE
Confidence            344445667889999999999999999998753       10  0       0      1133333332           


Q ss_pred             ----------hhcchh-----------------HHHHHHHHCCcEecCC-CCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----------LLCAGD-----------------ACLTFLHRHGVVYRDL-KLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----------~~~~g~-----------------~al~~lH~~~iih~dl-k~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                                |+.+++                 .|+.|||+++|+|||| ||.||+++.++. ++|+|||+|+.
T Consensus        89 ~~~~~~LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~-ikLiDFGlA~~  161 (365)
T PRK09188         89 ATGKDGLVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGE-AAVIDFQLASV  161 (365)
T ss_pred             EcCCcEEEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCC-EEEEECcccee
Confidence                      444332                 7899999999999999 999999988888 99999999996

>KOG0198|consensus

Probab=99.67  E-value=2.2e-17  Score=120.66  Aligned_cols=84  Identities=32%  Similarity=0.567  Sum_probs=67.8

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cccC-------chhH--------------------------HHHHH
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITND-------TNSI--------------------------LRFLL   65 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~-------~~~~--------------------------~~~~~   65 (127)
                      ..++...+.||+|+||.||++.+..         ....       .+.|                          ..+++
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            5668889999999999999999974         0000       1222                          44455


Q ss_pred             Hhhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEec-CCCeEEEEeccccee
Q psy7471          66 LLLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDA-GGSLLKLADFGRCAR  112 (127)
Q Consensus        66 ~~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~-~~~~~kl~dfg~a~~  112 (127)
                      +|+.+|+                         .|+.|||+++++|+||||+|||++. ++. +||+|||+++.
T Consensus        96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~-~KlaDFG~a~~  167 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGD-VKLADFGLAKK  167 (313)
T ss_pred             eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCe-EEeccCccccc
Confidence            5777766                         8999999999999999999999999 688 99999999886

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.67  E-value=3.7e-17  Score=119.97  Aligned_cols=39  Identities=33%  Similarity=0.531  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||.||+++.++. ++|+|||+++.
T Consensus       185 ~aL~~LH~~~ivHrDiKp~Nil~~~~~~-~kl~DfG~a~~  223 (338)
T cd05102         185 RGMEFLASRKCIHRDLAARNILLSENNV-VKICDFGLARD  223 (338)
T ss_pred             HHHHHHHHCCEECCCCccceEEEcCCCc-EEEeecccccc
Confidence            5789999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.67  E-value=1.7e-16  Score=118.62  Aligned_cols=83  Identities=34%  Similarity=0.572  Sum_probs=64.1

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------ccc----C------chhHHHHHHH-----------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------ITN----D------TNSILRFLLL-----------------------   66 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----~------~~~~~~~~~~-----------------------   66 (127)
                      ..|++.+.||+|+||+||+|+++.         +..    .      ...|+.++..                       
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~   80 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence            368999999999999999998865         100    0      0123333322                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+|+                        .||.|||.++|+||||||+||+++..+. ++|+|||+++.
T Consensus        81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~-~kL~DFGl~~~  150 (381)
T cd05626          81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGH-IKLTDFGLCTG  150 (381)
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCC-EEEeeCcCCcc
Confidence             555554                        6899999999999999999999999998 99999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0582|consensus

Probab=99.66  E-value=1.2e-16  Score=119.65  Aligned_cols=94  Identities=31%  Similarity=0.537  Sum_probs=74.1

Q ss_pred             CCCCCCCcccCCCeEEEEEeceeCCceEEEEEEcc------cc-cC----------------------------------
Q psy7471          18 GSSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS------IT-ND----------------------------------   56 (127)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~-~~----------------------------------   56 (127)
                      ...+..+....+.|++..+||.|.-++||+|++..      +. .+                                  
T Consensus        15 ~~~~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv   94 (516)
T KOG0582|consen   15 SSSEKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV   94 (516)
T ss_pred             ccccccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE
Confidence            34566788899999999999999999999999987      00 00                                  


Q ss_pred             chhHHHHHHHhhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccc
Q psy7471          57 TNSILRFLLLLLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC  110 (127)
Q Consensus        57 ~~~~~~~~~~~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a  110 (127)
                      .+.++++++-||.+|+                          .||.|||.+|.||||+|+.|||++.++. |||+|||.+
T Consensus        95 v~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~-VkLadFgvs  173 (516)
T KOG0582|consen   95 VDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGT-VKLADFGVS  173 (516)
T ss_pred             ecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCc-EEEcCceee
Confidence            0012222222566665                          7899999999999999999999999999 999999987


Q ss_pred             ee
Q psy7471         111 AR  112 (127)
Q Consensus       111 ~~  112 (127)
                      -.
T Consensus       174 a~  175 (516)
T KOG0582|consen  174 AS  175 (516)
T ss_pred             ee
Confidence            66

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.66  E-value=2.1e-16  Score=118.04  Aligned_cols=81  Identities=35%  Similarity=0.595  Sum_probs=63.5

Q ss_pred             CeEEEEEeceeCCceEEEEEEcc---------ccc----------CchhHHHHHHH------------------------
Q psy7471          30 DFHFIKVLGKGSFGKELFGHYRS---------ITN----------DTNSILRFLLL------------------------   66 (127)
Q Consensus        30 ~~~~~~~lg~G~fg~V~~~~~~~---------~~~----------~~~~~~~~~~~------------------------   66 (127)
                      .|++.+.||+|+||.||+|+.+.         +..          ....|+.++..                        
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            58999999999999999999865         000          01123333322                        


Q ss_pred             hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccce
Q psy7471          67 LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA  111 (127)
Q Consensus        67 ~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~  111 (127)
                      |+.+|+                        .|+.|||+++|+||||||+|||++.++. ++|+|||+++
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~-~kL~DFGla~  149 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCT  149 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC-EEEeECCCCc
Confidence            555554                        6899999999999999999999999999 9999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.66  E-value=3.6e-17  Score=120.08  Aligned_cols=39  Identities=44%  Similarity=0.786  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||+||+++.++. ++|+|||+++.
T Consensus       113 ~al~~lH~~~iiHrDlkp~Nili~~~~~-~kL~DfG~a~~  151 (332)
T cd05623         113 IAIDSVHQLHYVHRDIKPDNILMDMNGH-IRLADFGSCLK  151 (332)
T ss_pred             HHHHHHHHCCeEecCCCHHHEEECCCCC-EEEeecchhee
Confidence            6899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.66  E-value=3.2e-17  Score=120.08  Aligned_cols=39  Identities=59%  Similarity=1.131  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. ++|+|||+++.
T Consensus       112 ~al~~lH~~~ivHrDikp~Nill~~~~~-ikL~Dfg~~~~  150 (323)
T cd05615         112 VGLFFLHRRGIIYRDLKLDNVMLDSEGH-IKIADFGMCKE  150 (323)
T ss_pred             HHHHHHHHCCeeccCCCHHHeEECCCCC-EEEeccccccc
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0201|consensus

Probab=99.66  E-value=1.7e-16  Score=118.43  Aligned_cols=95  Identities=27%  Similarity=0.396  Sum_probs=76.2

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc-----------------c------------------------ccCchhHHHHHH
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS-----------------I------------------------TNDTNSILRFLL   65 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~-----------------~------------------------~~~~~~~~~~~~   65 (127)
                      ....|...+.||+|+||.||+|.+..                 .                        ..-....++++|
T Consensus        11 ~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM   90 (467)
T KOG0201|consen   11 PELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM   90 (467)
T ss_pred             cccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence            34567888999999999999998876                 0                        000114466777


Q ss_pred             Hhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec-----Ccc
Q psy7471          66 LLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK-----KIK  116 (127)
Q Consensus        66 ~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~-----~~~  116 (127)
                      +||.+|+                        .|+.|+|..+.+|||+|+.|+++...+. +||+|||.+-..     ...
T Consensus        91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~-vkl~DfgVa~ql~~~~~rr~  169 (467)
T KOG0201|consen   91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGD-VKLADFGVAGQLTNTVKRRK  169 (467)
T ss_pred             HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCc-EEEEecceeeeeechhhccc
Confidence            8888887                        7999999999999999999999999999 999999998872     225


Q ss_pred             cceeeE
Q psy7471         117 LFCDLL  122 (127)
Q Consensus       117 ~~~gt~  122 (127)
                      +|.||.
T Consensus       170 tfvGTP  175 (467)
T KOG0201|consen  170 TFVGTP  175 (467)
T ss_pred             cccccc
Confidence            677764

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=5.4e-17  Score=119.20  Aligned_cols=39  Identities=49%  Similarity=0.873  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. ++|+|||++..
T Consensus       113 ~~l~~lH~~~ivH~dlkp~Nill~~~~~-~kl~Dfg~~~~  151 (331)
T cd05597         113 LAIDSVHQLGYVHRDIKPDNVLLDKNGH-IRLADFGSCLR  151 (331)
T ss_pred             HHHHHHHhCCeEECCCCHHHEEECCCCC-EEEEECCceee
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=3.2e-16  Score=113.05  Aligned_cols=39  Identities=51%  Similarity=0.898  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. ++|+|||+++.
T Consensus       112 ~~l~~lH~~~i~H~dlkp~NIli~~~~~-~kl~Dfg~~~~  150 (291)
T cd05612         112 CALEYLHSKEIVYRDLKPENILLDKEGH-IKLTDFGFAKK  150 (291)
T ss_pred             HHHHHHHHCCeeecCCCHHHeEECCCCC-EEEEecCcchh
Confidence            7899999999999999999999999998 99999999886

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.64  E-value=8.2e-16  Score=111.15  Aligned_cols=39  Identities=28%  Similarity=0.606  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||+||+++.+.. ++|+|||+|+.
T Consensus       137 ~~l~~lH~~~iiHrDiKp~Nill~~~~~-~~l~DFGla~~  175 (294)
T PHA02882        137 TTLEYIHEHGISHGDIKPENIMVDGNNR-GYIIDYGIASH  175 (294)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEcCCCc-EEEEEcCCcee
Confidence            6899999999999999999999998888 99999999876

>KOG0589|consensus

Probab=99.64  E-value=3.6e-18  Score=128.38  Aligned_cols=94  Identities=27%  Similarity=0.491  Sum_probs=75.3

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cc---------------------------------cCchhH-HHH
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------IT---------------------------------NDTNSI-LRF   63 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~---------------------------------~~~~~~-~~~   63 (127)
                      .++.|.+.+++|+|+||.+++++++.         +.                                 +..+.. ..|
T Consensus         2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I   81 (426)
T KOG0589|consen    2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI   81 (426)
T ss_pred             ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence            47889999999999999999999987         00                                 001111 345


Q ss_pred             HHHhhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceecC---
Q psy7471          64 LLLLLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK---  114 (127)
Q Consensus        64 ~~~~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~---  114 (127)
                      +++||.||+                          .|+.|||+++|+|||||+.||++..+.. ++|.|||+|+...   
T Consensus        82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~-VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKK-VKLGDFGLAKILNPED  160 (426)
T ss_pred             EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCc-eeecchhhhhhcCCch
Confidence            555999988                          7999999999999999999999999999 9999999999833   


Q ss_pred             --cccceee
Q psy7471         115 --IKLFCDL  121 (127)
Q Consensus       115 --~~~~~gt  121 (127)
                        ..++.||
T Consensus       161 ~~a~tvvGT  169 (426)
T KOG0589|consen  161 SLASTVVGT  169 (426)
T ss_pred             hhhheecCC
Confidence              3445555

>KOG0588|consensus

Probab=99.64  E-value=1.2e-16  Score=124.24  Aligned_cols=97  Identities=26%  Similarity=0.396  Sum_probs=79.3

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc-------------------cccCchhHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS-------------------ITNDTNSILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------------~~~~~~~~~~~~~~--------------------   66 (127)
                      -...-|++++-||+|+-|.|.+|++..                   .....+.|+.||..                    
T Consensus         9 ~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~ly   88 (786)
T KOG0588|consen    9 NTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLY   88 (786)
T ss_pred             ccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEE
Confidence            345678999999999999999999976                   11223455555554                    


Q ss_pred             ----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee----cC
Q psy7471          67 ----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR----KK  114 (127)
Q Consensus        67 ----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~----~~  114 (127)
                          |+.+|+                        .|+.|||..+|+||||||+|+|++.... +||+|||+|.-    ..
T Consensus        89 lvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~n-IKIADFGMAsLe~~gkl  167 (786)
T KOG0588|consen   89 LVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNN-IKIADFGMASLEVPGKL  167 (786)
T ss_pred             EEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccC-EeeeccceeecccCCcc
Confidence                666666                        8999999999999999999999999999 99999999986    44


Q ss_pred             cccceeeEE
Q psy7471         115 IKLFCDLLI  123 (127)
Q Consensus       115 ~~~~~gt~~  123 (127)
                      ..|.||+.+
T Consensus       168 LeTSCGSPH  176 (786)
T KOG0588|consen  168 LETSCGSPH  176 (786)
T ss_pred             ccccCCCcc
Confidence            578888864

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.64  E-value=4.5e-17  Score=119.20  Aligned_cols=39  Identities=51%  Similarity=1.002  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       106 ~~L~~lH~~~ivHrDlkp~NIll~~~~~-~kl~DfG~a~~  144 (323)
T cd05571         106 SALGYLHSCDVVYRDLKLENLMLDKDGH-IKITDFGLCKE  144 (323)
T ss_pred             HHHHHHHhCCeEeCCCCHHHEEECCCCC-EEEeeCCCCcc
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=8.4e-17  Score=118.38  Aligned_cols=39  Identities=51%  Similarity=0.897  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||.++++|+||||+||+++.++. ++|+|||+++.
T Consensus       112 ~aL~~LH~~giiH~Dlkp~NIll~~~~~-~kL~Dfg~~~~  150 (350)
T cd05573         112 LALDSVHKLGFIHRDIKPDNILIDADGH-IKLADFGLCKK  150 (350)
T ss_pred             HHHHHHHHCCeeccCCCHHHeEECCCCC-EEeecCCCCcc
Confidence            7899999999999999999999999999 99999999876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.64  E-value=1.1e-15  Score=115.02  Aligned_cols=85  Identities=22%  Similarity=0.375  Sum_probs=65.8

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc------c----ccCchhHHHHHHH------------------------hhcch
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS------I----TNDTNSILRFLLL------------------------LLCAG   71 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~------~----~~~~~~~~~~~~~------------------------~~~~g   71 (127)
                      +...+|++.+.||+|+||.||+|+...      +    ......|..++..                        ++. +
T Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~  167 (391)
T PHA03212         89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-T  167 (391)
T ss_pred             cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-C
Confidence            455789999999999999999998865      1    0111234444443                        111 0


Q ss_pred             h------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          72 D------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        72 ~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +                        .||.|||+++|+||||||.||+++..+. ++|+|||+++.
T Consensus       168 ~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~-vkL~DFG~a~~  231 (391)
T PHA03212        168 DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGD-VCLGDFGAACF  231 (391)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCC-EEEEeCCcccc
Confidence            0                        7899999999999999999999999998 99999999864

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=5.9e-16  Score=113.57  Aligned_cols=83  Identities=30%  Similarity=0.562  Sum_probs=64.4

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------cc----cC------chhHHHHHHH-----------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------IT----ND------TNSILRFLLL-----------------------   66 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~----~~------~~~~~~~~~~-----------------------   66 (127)
                      .+|++.+.||+|+||.||+|+++.         +.    ..      ...++.++..                       
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            479999999999999999999865         00    00      0122222222                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+++                        .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~kL~Dfg~a~~  150 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGH-IKLTDFGLSKG  150 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCC-EEEEeCcCCcc
Confidence             444443                        7899999999999999999999999998 99999999886

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.63  E-value=1.3e-16  Score=116.85  Aligned_cols=39  Identities=46%  Similarity=0.775  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++++||||||+||+++.++. +||+|||+++.
T Consensus       113 ~aL~~lH~~~i~H~Dlkp~NIll~~~~~-~kL~Dfg~a~~  151 (330)
T cd05601         113 LAIHSVHQMGYVHRDIKPENVLIDRTGH-IKLADFGSAAR  151 (330)
T ss_pred             HHHHHHHHCCeEcccCchHheEECCCCC-EEeccCCCCeE
Confidence            7899999999999999999999999999 99999999876

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0610|consensus

Probab=99.63  E-value=1.2e-16  Score=118.53  Aligned_cols=88  Identities=35%  Similarity=0.578  Sum_probs=72.8

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc-------------------cccCchhHHHHHHH------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS-------------------ITNDTNSILRFLLL------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------------~~~~~~~~~~~~~~------------------   66 (127)
                      ..+..+.|++++.||.|.-|+||+|+.++                   ...+...|.+|+..                  
T Consensus        72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~  151 (459)
T KOG0610|consen   72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKY  151 (459)
T ss_pred             CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccce
Confidence            44566779999999999999999999987                   01112244444433                  


Q ss_pred             ------hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            ||.||+                          .||+|||-.|||.|||||+|||+-.++. +.|+||.++..
T Consensus       152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGH-IMLsDFDLS~~  228 (459)
T KOG0610|consen  152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGH-IMLSDFDLSLR  228 (459)
T ss_pred             eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCc-EEeeecccccc
Confidence                  999998                          7999999999999999999999999999 99999999876

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.63  E-value=2.3e-16  Score=123.70  Aligned_cols=39  Identities=44%  Similarity=0.696  Sum_probs=35.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecC-CCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAG-GSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~-~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.+ +. +||+|||+|+.
T Consensus       266 ~aL~yLH~~gIiHRDLKP~NILl~~~~~~-~KL~DFGlA~~  305 (566)
T PLN03225        266 FALDGLHSTGIVHRDVKPQNIIFSEGSGS-FKIIDLGAAAD  305 (566)
T ss_pred             HHHHHHHHCCEEeCcCCHHHEEEeCCCCc-EEEEeCCCccc
Confidence            57999999999999999999999864 56 99999999975

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.63  E-value=1.5e-15  Score=117.40  Aligned_cols=39  Identities=36%  Similarity=0.549  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       154 ~aL~~lH~~~IiHrDLKP~NILl~~~~~-vkL~DFGls~~  192 (496)
T PTZ00283        154 LAVHHVHSKHMIHRDIKSANILLCSNGL-VKLGDFGFSKM  192 (496)
T ss_pred             HHHHHHHhCCEecCCCCHHHEEEeCCCC-EEEEecccCee
Confidence            6899999999999999999999999998 99999999876

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.63  E-value=9.9e-17  Score=117.34  Aligned_cols=39  Identities=56%  Similarity=0.997  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. +||+|||+++.
T Consensus       112 ~al~~lH~~~ivHrdlkp~Nill~~~~~-~kL~Dfg~~~~  150 (324)
T cd05589         112 LGLQYLHENKIVYRDLKLDNLLLDTEGF-VKIADFGLCKE  150 (324)
T ss_pred             HHHHHHHhCCeEecCCCHHHeEECCCCc-EEeCcccCCcc
Confidence            7899999999999999999999999999 99999999875

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.63  E-value=1.2e-15  Score=118.00  Aligned_cols=39  Identities=33%  Similarity=0.739  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||.|||++.++. +||+|||+++.
T Consensus       278 ~aL~yLH~~gIiHrDLKP~NILl~~~~~-vkL~DFGla~~  316 (501)
T PHA03210        278 CAVEYIHDKKLIHRDIKLENIFLNCDGK-IVLGDFGTAMP  316 (501)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEECCCCC-EEEEeCCCcee
Confidence            6899999999999999999999999998 99999999986

>KOG1989|consensus

Probab=99.63  E-value=4e-16  Score=123.52  Aligned_cols=85  Identities=29%  Similarity=0.465  Sum_probs=67.6

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc----------cccCc--------------------------------------h
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS----------ITNDT--------------------------------------N   58 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~----------~~~~~--------------------------------------~   58 (127)
                      ...++++.++|.+|+|+.||+|+...          +..++                                      .
T Consensus        35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~  114 (738)
T KOG1989|consen   35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV  114 (738)
T ss_pred             CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence            33457789999999999999998865          01111                                      1


Q ss_pred             hHHHHHHHhhcchh--------------------------HHHHHHHHCC--cEecCCCCCCEEEecCCCeEEEEecccc
Q psy7471          59 SILRFLLLLLCAGD--------------------------ACLTFLHRHG--VVYRDLKLDNILLDAGGSLLKLADFGRC  110 (127)
Q Consensus        59 ~~~~~~~~~~~~g~--------------------------~al~~lH~~~--iih~dlk~~nil~~~~~~~~kl~dfg~a  110 (127)
                      .|.-++|+||.+|.                          .||.+||...  |||||||-+|+|+..++. .||||||.+
T Consensus       115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~-~KLCDFGSa  193 (738)
T KOG1989|consen  115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGN-YKLCDFGSA  193 (738)
T ss_pred             eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCC-EEeCccccc
Confidence            33445566888655                          8999999985  999999999999999999 999999987


Q ss_pred             ee
Q psy7471         111 AR  112 (127)
Q Consensus       111 ~~  112 (127)
                      ..
T Consensus       194 tt  195 (738)
T KOG1989|consen  194 TT  195 (738)
T ss_pred             cc
Confidence            65

>KOG0667|consensus

Probab=99.63  E-value=1e-15  Score=118.32  Aligned_cols=40  Identities=40%  Similarity=0.612  Sum_probs=35.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCC-eEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGS-LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~-~~kl~dfg~a~~  112 (127)
                      .||.+||..+|||.||||+|||+..... .+||+|||.|-.
T Consensus       300 ~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~  340 (586)
T KOG0667|consen  300 TALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF  340 (586)
T ss_pred             HHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence            7899999999999999999999986543 399999999876

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.63  E-value=1.2e-15  Score=109.59  Aligned_cols=39  Identities=44%  Similarity=0.741  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. ++|+|||++..
T Consensus       113 ~~l~~lH~~~iiH~dikp~Nill~~~~~-~kl~Dfg~~~~  151 (285)
T cd05631         113 CGLEDLQRERIVYRDLKPENILLDDRGH-IRISDLGLAVQ  151 (285)
T ss_pred             HHHHHHHhCCEEeCCCCHHHEEECCCCC-EEEeeCCCcEE
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0586|consensus

Probab=99.62  E-value=1.7e-16  Score=122.08  Aligned_cols=99  Identities=28%  Similarity=0.461  Sum_probs=78.2

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc--------cc----------cCchhHHHHHHH------------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------IT----------NDTNSILRFLLL------------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~----------~~~~~~~~~~~~------------------   66 (127)
                      ........|.+.+.||+|.|++|.+|++..        ++          ...-.|+++++.                  
T Consensus        50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~  129 (596)
T KOG0586|consen   50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT  129 (596)
T ss_pred             cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence            344566779999999999999999999976        00          001133444433                  


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee----
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR----  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~----  112 (127)
                            |+.+|+                        .|++|||.++|+|||||++|++++.+.. +||+|||++..    
T Consensus       130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mn-ikIaDfgfS~~~~~~  208 (596)
T KOG0586|consen  130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMN-IKIADFGFSTFFDYG  208 (596)
T ss_pred             eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccc-eeeeccccceeeccc
Confidence                  555555                        8999999999999999999999999999 99999999998    


Q ss_pred             cCcccceeeE
Q psy7471         113 KKIKLFCDLL  122 (127)
Q Consensus       113 ~~~~~~~gt~  122 (127)
                      .+..++||+.
T Consensus       209 ~~lqt~cgsp  218 (596)
T KOG0586|consen  209 LMLQTFCGSP  218 (596)
T ss_pred             ccccccCCCC
Confidence            5567888875

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.62  E-value=2.1e-15  Score=115.02  Aligned_cols=40  Identities=38%  Similarity=0.634  Sum_probs=36.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++.++..+||+|||+|+.
T Consensus       181 ~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~  220 (440)
T PTZ00036        181 RALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKN  220 (440)
T ss_pred             HHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchh
Confidence            6899999999999999999999986653399999999986

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.62  E-value=9.5e-17  Score=117.24  Aligned_cols=39  Identities=59%  Similarity=1.141  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||.||+++.++. +||+|||+++.
T Consensus       107 ~al~~LH~~~ivH~dlkp~Nill~~~~~-~kL~Dfg~a~~  145 (316)
T cd05592         107 CGLQFLHKKGIIYRDLKLDNVLLDKDGH-IKIADFGMCKE  145 (316)
T ss_pred             HHHHHHHHCCEEeCCCCHHHeEECCCCC-EEEccCcCCeE
Confidence            7899999999999999999999999998 99999999986

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.62  E-value=9.1e-17  Score=117.58  Aligned_cols=39  Identities=51%  Similarity=0.935  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++++||||||.||+++.++. ++|+|||+++.
T Consensus       107 ~~L~~lH~~giiHrDlkp~Nili~~~~~-~kl~DfG~a~~  145 (325)
T cd05602         107 SALGYLHSLNIVYRDLKPENILLDSQGH-IVLTDFGLCKE  145 (325)
T ss_pred             HHHHHHHHCCeEecCCCHHHeEECCCCC-EEEccCCCCcc
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.62  E-value=1.1e-15  Score=111.28  Aligned_cols=39  Identities=28%  Similarity=0.499  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++++|+||||.||+++.+.. +||+|||+++.
T Consensus       120 ~~L~~LH~~~iiH~dlkp~Nill~~~~~-~kl~DfG~a~~  158 (316)
T cd05108         120 KGMNYLEERRLVHRDLAARNVLVKTPQH-VKITDFGLAKL  158 (316)
T ss_pred             HHHHHHHhcCeeccccchhheEecCCCc-EEEcccccccc
Confidence            7899999999999999999999999998 99999999986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.61  E-value=4.9e-16  Score=114.85  Aligned_cols=39  Identities=36%  Similarity=0.623  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++++||||||+||+++.++. +||+|||+++.
T Consensus       130 ~aL~~LH~~givHrDikp~Nill~~~~~-~kl~Dfg~~~~  168 (355)
T cd07874         130 CGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFGLART  168 (355)
T ss_pred             HHHHHHHhCCcccCCCChHHEEECCCCC-EEEeeCccccc
Confidence            7899999999999999999999999998 99999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.61  E-value=1.2e-16  Score=117.39  Aligned_cols=39  Identities=49%  Similarity=0.997  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       106 ~aL~~LH~~~ivHrDikp~NIll~~~~~-~kL~DfG~~~~  144 (328)
T cd05593         106 SALDYLHSGKIVYRDLKLENLMLDKDGH-IKITDFGLCKE  144 (328)
T ss_pred             HHHHHHHhCCeEecccCHHHeEECCCCc-EEEecCcCCcc
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.61  E-value=1.9e-15  Score=109.41  Aligned_cols=84  Identities=27%  Similarity=0.424  Sum_probs=64.6

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------ccc--------CchhHHHHHHH------------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITN--------DTNSILRFLLL------------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~--------~~~~~~~~~~~------------------------   66 (127)
                      .++|++.+.||+|+||.||+|+.+.         +..        ....|..++..                        
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            4789999999999999999999864         100        01133333333                        


Q ss_pred             hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.++.                        .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus        84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~-~kl~Dfg~~~~  152 (303)
T cd07869          84 YVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGE-LKLADFGLARA  152 (303)
T ss_pred             CCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC-EEECCCCccee
Confidence            221110                        7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.61  E-value=1.8e-15  Score=108.85  Aligned_cols=85  Identities=29%  Similarity=0.470  Sum_probs=65.2

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cc--c------CchhHHHHHHH-----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------IT--N------DTNSILRFLLL-----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--~------~~~~~~~~~~~-----------------------   66 (127)
                      .+++|++.+.||+|+||.||+|+.+.         +.  .      ....|+.++..                       
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF   82 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            46789999999999999999998864         00  0      01134444333                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+.-                        .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus        83 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~-~kl~DfG~~~~  152 (288)
T cd07871          83 EYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGE-LKLADFGLARA  152 (288)
T ss_pred             eCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC-EEECcCcceee
Confidence             221100                        7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.61  E-value=2.6e-16  Score=115.19  Aligned_cols=39  Identities=51%  Similarity=1.030  Sum_probs=36.7

Q ss_pred             HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+ ++++||||||.||+++.++. +||+|||+++.
T Consensus       106 ~aL~~lH~~~~ivHrDikp~NIll~~~~~-~kL~Dfg~~~~  145 (325)
T cd05594         106 SALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKE  145 (325)
T ss_pred             HHHHHHHhcCCEEecCCCCCeEEECCCCC-EEEecCCCCee
Confidence            78999997 79999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0577|consensus

Probab=99.61  E-value=1.9e-16  Score=122.42  Aligned_cols=91  Identities=29%  Similarity=0.427  Sum_probs=73.2

Q ss_pred             eEEEEEeceeCCceEEEEEEcc--------------------------------------cc-----cCchhHHHHHHHh
Q psy7471          31 FHFIKVLGKGSFGKELFGHYRS--------------------------------------IT-----NDTNSILRFLLLL   67 (127)
Q Consensus        31 ~~~~~~lg~G~fg~V~~~~~~~--------------------------------------~~-----~~~~~~~~~~~~~   67 (127)
                      |.-++.||.|+||.||-|++..                                      .+     .-.+...+++|+|
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            7788999999999999999876                                      00     0011345667778


Q ss_pred             hcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee-cCcccceeeE
Q psy7471          68 LCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-KKIKLFCDLL  122 (127)
Q Consensus        68 ~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~-~~~~~~~gt~  122 (127)
                      |.|.-                        .|+.|||+.+.||||||..|||+...+. |||+|||.|.. ....+|.||.
T Consensus       108 ClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~-VKLaDFGSAsi~~PAnsFvGTP  186 (948)
T KOG0577|consen  108 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGL-VKLADFGSASIMAPANSFVGTP  186 (948)
T ss_pred             HhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCe-eeeccccchhhcCchhcccCCc
Confidence            87643                        7899999999999999999999999999 99999999886 4456777764

>KOG0986|consensus

Probab=99.61  E-value=1.7e-15  Score=113.91  Aligned_cols=88  Identities=38%  Similarity=0.604  Sum_probs=70.4

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------------cccC-----chhHHHHHHH------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------------ITND-----TNSILRFLLL------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~~-----~~~~~~~~~~------------------   66 (127)
                      +.+..+.|+.-++||+|+||.||-|+.+.              +...     ...|..|+..                  
T Consensus       180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~  259 (591)
T KOG0986|consen  180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA  259 (591)
T ss_pred             hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence            45677899999999999999999998876              1111     0133333333                  


Q ss_pred             ------hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            .|.||+                          .|+++||+.+|+.||+||+|||+|+.+. ++|+|+|+|-+
T Consensus       260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~Gh-vRISDLGLAve  336 (591)
T KOG0986|consen  260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGH-VRISDLGLAVE  336 (591)
T ss_pred             eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCC-eEeeccceEEe
Confidence                  445555                          6899999999999999999999999999 99999999987

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.61  E-value=1.7e-16  Score=115.98  Aligned_cols=39  Identities=74%  Similarity=1.206  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||+||+++.++. ++|+|||+++.
T Consensus       107 ~aL~~LH~~~ivHrDikp~Nill~~~~~-~kL~Dfg~~~~  145 (321)
T cd05591         107 LALMFLHRHGVIYRDLKLDNILLDAEGH-CKLADFGMCKE  145 (321)
T ss_pred             HHHHHHHHCCeeccCCCHHHeEECCCCC-EEEeeccccee
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.60  E-value=1.8e-16  Score=115.82  Aligned_cols=39  Identities=46%  Similarity=0.914  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. +||+|||+++.
T Consensus       107 ~~L~~lH~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~~~~  145 (321)
T cd05603         107 SAIGYLHSLNIIYRDLKPENILLDSQGH-VVLTDFGLCKE  145 (321)
T ss_pred             HHHHHHHHCCeEeccCCHHHeEECCCCC-EEEccCCCCcc
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.60  E-value=2.3e-16  Score=115.39  Aligned_cols=39  Identities=62%  Similarity=1.100  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. ++|+|||+++.
T Consensus       107 ~~L~~lH~~~ivH~dlkp~NIli~~~~~-~kL~DfG~~~~  145 (320)
T cd05590         107 SALMFLHDKGIIYRDLKLDNVLLDHEGH-CKLADFGMCKE  145 (320)
T ss_pred             HHHHHHHHCCeEeCCCCHHHeEECCCCc-EEEeeCCCCee
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0662|consensus

Probab=99.60  E-value=4.2e-16  Score=105.78  Aligned_cols=85  Identities=32%  Similarity=0.533  Sum_probs=65.7

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc-----------cccC-------chhHHHHHHH------------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS-----------ITND-------TNSILRFLLL------------------------   66 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~-----------~~~~-------~~~~~~~~~~------------------------   66 (127)
                      +.|...+.||+|.||+||+|++++           ...+       ...|+.++.+                        
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe   81 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence            456777899999999999999987           1111       1155555555                        


Q ss_pred             hhcc----------hh--------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceecC
Q psy7471          67 LLCA----------GD--------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK  114 (127)
Q Consensus        67 ~~~~----------g~--------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~  114 (127)
                      ||..          |+              .|+.|+|+++++|||+||.|.++..++. +|++|||+++...
T Consensus        82 ~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~nge-lkladfglarafg  152 (292)
T KOG0662|consen   82 FCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGE-LKLADFGLARAFG  152 (292)
T ss_pred             HhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCc-EEecccchhhhcC
Confidence            1111          11              6799999999999999999999999999 9999999999733

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.60  E-value=2e-16  Score=116.12  Aligned_cols=39  Identities=54%  Similarity=1.100  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||+||+++.++. ++|+|||+++.
T Consensus       107 ~~l~~lH~~~ivH~Dikp~Nili~~~~~-~kL~DfG~~~~  145 (329)
T cd05618         107 LALNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKE  145 (329)
T ss_pred             HHHHHHHHCCeeeCCCCHHHEEECCCCC-EEEeeCCcccc
Confidence            7899999999999999999999999999 99999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=2.1e-16  Score=115.81  Aligned_cols=39  Identities=51%  Similarity=0.814  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||+||+++.++. ++|+|||+++.
T Consensus       107 ~al~~LH~~~ivHrDlkp~Nili~~~~~-~kl~Dfg~a~~  145 (330)
T cd05586         107 LALEHLHKYDIVYRDLKPENILLDATGH-IALCDFGLSKA  145 (330)
T ss_pred             HHHHHHHHCCeEeccCCHHHeEECCCCC-EEEecCCcCcC
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.60  E-value=3.5e-16  Score=124.67  Aligned_cols=85  Identities=38%  Similarity=0.713  Sum_probs=65.4

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------ccc----------CchhHHHHHHH---------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITN----------DTNSILRFLLL---------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----------~~~~~~~~~~~---------------------   66 (127)
                      .+++|++.+.||+|+||.||+|++..         +..          ....+..++..                     
T Consensus         2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l   81 (669)
T cd05610           2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL   81 (669)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence            36899999999999999999999874         100          00112222211                     


Q ss_pred             ---hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                         |+.+++                        .||.|||.++|+||||||+|||++.++. ++|+|||+++.
T Consensus        82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~-vkL~DFGls~~  153 (669)
T cd05610          82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGH-IKLTDFGLSKV  153 (669)
T ss_pred             EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCC-EEEEeCCCCcc
Confidence               343332                        7899999999999999999999999888 99999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.60  E-value=1.9e-16  Score=115.70  Aligned_cols=39  Identities=56%  Similarity=1.105  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||+||+++.++. ++|+|||+++.
T Consensus       107 ~~l~~lH~~~ivHrDlkp~Nil~~~~~~-~kl~Dfg~~~~  145 (316)
T cd05620         107 CGLQFLHSKGIIYRDLKLDNVMLDRDGH-IKIADFGMCKE  145 (316)
T ss_pred             HHHHHHHHCCeEecCCCHHHeEECCCCC-EEeCccCCCee
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.60  E-value=2.2e-16  Score=115.60  Aligned_cols=39  Identities=51%  Similarity=0.924  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. ++|+|||+++.
T Consensus       107 ~al~~lH~~givH~Dlkp~NIll~~~~~-~kL~DfG~~~~  145 (325)
T cd05604         107 SALGYLHSINIVYRDLKPENILLDSQGH-VVLTDFGLCKE  145 (325)
T ss_pred             HHHHHHHHCCeeecCCCHHHeEECCCCC-EEEeecCCccc
Confidence            7899999999999999999999999999 99999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0574|consensus

Probab=99.60  E-value=3.6e-18  Score=123.35  Aligned_cols=97  Identities=32%  Similarity=0.366  Sum_probs=76.7

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc--------------------------------------cccCchhHHHHHHH
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS--------------------------------------ITNDTNSILRFLLL   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------------------------------~~~~~~~~~~~~~~   66 (127)
                      ..+.+.|.+...||+|+||.||+|.++.                                      -...++..++|+++
T Consensus        29 K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME  108 (502)
T KOG0574|consen   29 KPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME  108 (502)
T ss_pred             CChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence            3455679999999999999999999887                                      01122344555666


Q ss_pred             hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec-----Ccc
Q psy7471          67 LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK-----KIK  116 (127)
Q Consensus        67 ~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~-----~~~  116 (127)
                      ||..|+                         .|++|||..+-||||+|..|||+..++. .||+|||.|...     +-.
T Consensus       109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~-AKLADFGVAGQLTDTMAKRN  187 (502)
T KOG0574|consen  109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGI-AKLADFGVAGQLTDTMAKRN  187 (502)
T ss_pred             hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccch-hhhhhccccchhhhhHHhhC
Confidence            888887                         6899999999999999999999999999 999999998872     224


Q ss_pred             cceeeE
Q psy7471         117 LFCDLL  122 (127)
Q Consensus       117 ~~~gt~  122 (127)
                      ++.||.
T Consensus       188 TVIGTP  193 (502)
T KOG0574|consen  188 TVIGTP  193 (502)
T ss_pred             ccccCc
Confidence            555653

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.59  E-value=2.5e-16  Score=115.16  Aligned_cols=39  Identities=49%  Similarity=0.924  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. +||+|||+++.
T Consensus       107 ~~l~~lH~~givH~dikp~NIll~~~~~-~kl~Dfg~~~~  145 (323)
T cd05575         107 SALGYLHSLNIIYRDLKPENILLDSQGH-VVLTDFGLCKE  145 (323)
T ss_pred             HHHHHHHHCCeEeCCCCHHHeEECCCCc-EEEeccCCCcc
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0032|consensus

Probab=99.59  E-value=3.6e-15  Score=111.99  Aligned_cols=97  Identities=29%  Similarity=0.439  Sum_probs=73.3

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------------cc-----cCchhHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------------IT-----NDTNSILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~-----~~~~~~~~~~~~--------------------   66 (127)
                      -..+.|++.+.||+|.||+||+|+.+.              ..     .....|+.++..                    
T Consensus        32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~  111 (382)
T KOG0032|consen   32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV  111 (382)
T ss_pred             cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence            344679999999999999999999987              10     122355555554                    


Q ss_pred             -----hhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCC---eEEEEecccceec--
Q psy7471          67 -----LLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS---LLKLADFGRCARK--  113 (127)
Q Consensus        67 -----~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~---~~kl~dfg~a~~~--  113 (127)
                           +|.+|+                       .|+.|||..+++|||+||+|+|+.....   .+|++|||++...  
T Consensus       112 ~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~  191 (382)
T KOG0032|consen  112 YLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP  191 (382)
T ss_pred             EEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence                 444444                       7899999999999999999999976531   3999999999982  


Q ss_pred             --CcccceeeE
Q psy7471         114 --KIKLFCDLL  122 (127)
Q Consensus       114 --~~~~~~gt~  122 (127)
                        ...+.|||.
T Consensus       192 ~~~~~~~~Gtp  202 (382)
T KOG0032|consen  192 GERLHTIVGTP  202 (382)
T ss_pred             CceEeeecCCc
Confidence              345667764

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.59  E-value=2.7e-16  Score=115.45  Aligned_cols=39  Identities=59%  Similarity=1.128  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||+||+++.++. ++|+|||+++.
T Consensus       107 ~~l~~lH~~~ivH~dlkp~Nili~~~~~-~kL~Dfg~~~~  145 (329)
T cd05588         107 LALNFLHERGIIYRDLKLDNVLLDAEGH-IKLTDYGMCKE  145 (329)
T ss_pred             HHHHHHHHCCeEecCCCHHHeEECCCCC-EEECcCccccc
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0579|consensus

Probab=99.59  E-value=3.8e-17  Score=127.24  Aligned_cols=93  Identities=32%  Similarity=0.550  Sum_probs=70.0

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------cccCch-------hHHHH------------------------HHHhh
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------ITNDTN-------SILRF------------------------LLLLL   68 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~~~-------~~~~~------------------------~~~~~   68 (127)
                      +-+.+...||.|+||.||+|.++.         +....+       -++.|                        +.+||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            335678889999999999999987         111111       11222                        22366


Q ss_pred             cchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceecC-----cccc
Q psy7471          69 CAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK-----IKLF  118 (127)
Q Consensus        69 ~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~-----~~~~  118 (127)
                      .||.                         .|+.|||+++|||||||..|||+.-++. ++|+|||.+....     -.+|
T Consensus       112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGd-irLADFGVSAKn~~t~qkRDsF  190 (1187)
T KOG0579|consen  112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGD-IRLADFGVSAKNKSTRQKRDSF  190 (1187)
T ss_pred             CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCc-EeeecccccccchhHHhhhccc
Confidence            6664                         8999999999999999999999999999 9999999987632     3567


Q ss_pred             eeeE
Q psy7471         119 CDLL  122 (127)
Q Consensus       119 ~gt~  122 (127)
                      .||.
T Consensus       191 IGTP  194 (1187)
T KOG0579|consen  191 IGTP  194 (1187)
T ss_pred             cCCc
Confidence            7764

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.59  E-value=3e-16  Score=115.10  Aligned_cols=39  Identities=59%  Similarity=1.139  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||+||+++.++. ++|+|||+++.
T Consensus       107 ~al~~lH~~~ivHrDlkp~Nili~~~~~-~kl~Dfg~~~~  145 (327)
T cd05617         107 IALNFLHERGIIYRDLKLDNVLLDADGH-IKLTDYGMCKE  145 (327)
T ss_pred             HHHHHHHHCCeeccCCCHHHEEEeCCCC-EEEecccccee
Confidence            7899999999999999999999999999 99999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.59  E-value=5e-16  Score=112.39  Aligned_cols=39  Identities=31%  Similarity=0.476  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       149 ~al~~lH~~~ivH~dlkp~Nill~~~~~-~kl~DfG~~~~  187 (304)
T cd05096         149 SGMKYLSSLNFVHRDLATRNCLVGENLT-IKIADFGMSRN  187 (304)
T ss_pred             HHHHHHHHCCccccCcchhheEEcCCcc-EEECCCcccee
Confidence            6799999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.59  E-value=5.5e-16  Score=109.40  Aligned_cols=88  Identities=26%  Similarity=0.565  Sum_probs=67.0

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc-------cccCc-----hhHHHHHHH-------------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS-------ITNDT-----NSILRFLLL-------------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~~-----~~~~~~~~~-------------------------   66 (127)
                      |.+.+.+|++.+.||+|+||.||++...+       ...+.     ..+..++..                         
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (256)
T cd05082           1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   80 (256)
T ss_pred             CCccHHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence            45778899999999999999999998765       10000     022222222                         


Q ss_pred             hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+++                          .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~-~kl~dfg~~~~  151 (256)
T cd05082          81 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNV-AKVSDFGLTKE  151 (256)
T ss_pred             CCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCc-EEecCCcccee
Confidence            232222                          7899999999999999999999999998 99999999886

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0578|consensus

Probab=99.59  E-value=4.2e-16  Score=119.00  Aligned_cols=83  Identities=35%  Similarity=0.567  Sum_probs=68.5

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc-----------cc-----------------------------cCchhHHHHHHHhh
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS-----------IT-----------------------------NDTNSILRFLLLLL   68 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~-----------~~-----------------------------~~~~~~~~~~~~~~   68 (127)
                      ..|.....||+|+-|.||.|+...           +.                             .-...+++.+|+|+
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym  352 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM  352 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence            458888999999999999998866           00                             00013445556688


Q ss_pred             cchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          69 CAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        69 ~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+|+                       .||+|||.++|+|||||.+|||+..++. +||+|||++..
T Consensus       353 ~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~-vKltDFGFcaq  418 (550)
T KOG0578|consen  353 EGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGS-VKLTDFGFCAQ  418 (550)
T ss_pred             CCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCc-EEEeeeeeeec
Confidence            8876                       7999999999999999999999999999 99999999987

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.59  E-value=7.8e-15  Score=108.90  Aligned_cols=39  Identities=26%  Similarity=0.513  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||.++|+||||||.||+++..+. ++|+|||+++.
T Consensus       168 ~aL~~LH~~~ivHrDlkp~Nill~~~~~-~kl~DfG~a~~  206 (357)
T PHA03209        168 EGLRYLHAQRIIHRDVKTENIFINDVDQ-VCIGDLGAAQF  206 (357)
T ss_pred             HHHHHHHHCCeecCCCCHHHEEECCCCC-EEEecCccccc
Confidence            7899999999999999999999999998 99999999875

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.59  E-value=7e-16  Score=114.27  Aligned_cols=39  Identities=36%  Similarity=0.623  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++.++. ++|+|||+++.
T Consensus       134 ~~L~~LH~~~ivHrDlkp~NIl~~~~~~-~kl~Dfg~a~~  172 (359)
T cd07876         134 CGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFGLART  172 (359)
T ss_pred             HHHHHHHhCCcccCCCCHHHEEECCCCC-EEEecCCCccc
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.59  E-value=1.2e-15  Score=117.45  Aligned_cols=39  Identities=38%  Similarity=0.542  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||.||+++.++. +||+|||+++.
T Consensus       180 ~aL~~lH~~~ivHrDlkp~NIll~~~~~-~kL~DFgla~~  218 (478)
T PTZ00267        180 LALDEVHSRKMMHRDLKSANIFLMPTGI-IKLGDFGFSKQ  218 (478)
T ss_pred             HHHHHHHhCCEEECCcCHHhEEECCCCc-EEEEeCcCcee
Confidence            6899999999999999999999999998 99999999986

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.58  E-value=5.2e-16  Score=111.51  Aligned_cols=39  Identities=26%  Similarity=0.422  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       130 ~~l~~lH~~~i~H~dikp~nili~~~~~-~~L~Dfg~~~~  168 (288)
T cd05061         130 DGMAYLNAKKFVHRDLAARNCMVAHDFT-VKIGDFGMTRD  168 (288)
T ss_pred             HHHHHHHhCCCcCCCCChheEEEcCCCc-EEECcCCcccc
Confidence            6789999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.58  E-value=1.9e-15  Score=113.00  Aligned_cols=39  Identities=36%  Similarity=0.556  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.... ++|+|||+++.
T Consensus       225 ~~l~~lH~~~ivH~Dlkp~Nill~~~~~-~kl~DfG~a~~  263 (375)
T cd05104         225 KGMSFLASKNCIHRDLAARNILLTHGRI-TKICDFGLARD  263 (375)
T ss_pred             HHHHHHHHCCeeccCCchhhEEEECCCc-EEEecCcccee
Confidence            5789999999999999999999998888 99999999876

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG1035|consensus

Probab=99.58  E-value=3.4e-16  Score=127.78  Aligned_cols=39  Identities=41%  Similarity=0.755  Sum_probs=37.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +||.|+|+.+||||||||.||+++.++. |||.|||+|..
T Consensus       708 EGLaYIH~~giIHRDLKP~NIFLd~~~~-VKIGDFGLAt~  746 (1351)
T KOG1035|consen  708 EGLAYIHDQGIIHRDLKPRNIFLDSRNS-VKIGDFGLATD  746 (1351)
T ss_pred             HHHHHHHhCceeeccCCcceeEEcCCCC-eeecccccchh
Confidence            8999999999999999999999999999 99999999887

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=3.7e-16  Score=113.76  Aligned_cols=39  Identities=51%  Similarity=0.869  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. ++|+|||+++.
T Consensus       104 ~~l~~lH~~~i~HrDlkp~Nili~~~~~-~kl~Dfg~~~~  142 (312)
T cd05585         104 CALENLHKFNVIYRDLKPENILLDYQGH-IALCDFGLCKL  142 (312)
T ss_pred             HHHHHHHhCCeEeCCCCHHHeEECCCCc-EEEEECccccc
Confidence            6899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.58  E-value=1.3e-15  Score=113.79  Aligned_cols=39  Identities=31%  Similarity=0.531  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.+.. ++|+|||+++.
T Consensus       223 ~aL~yLH~~giiHrDLkp~Nil~~~~~~-~kL~DfGla~~  261 (374)
T cd05106         223 QGMDFLASKNCIHRDVAARNVLLTDGRV-AKICDFGLARD  261 (374)
T ss_pred             HHHHHHHHCCEEeccCchheEEEeCCCe-EEEeeceeeee
Confidence            6789999999999999999999998888 99999999886

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.58  E-value=4.3e-15  Score=106.13  Aligned_cols=39  Identities=28%  Similarity=0.500  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. ++|+|||+++.
T Consensus       120 ~~L~~lH~~~iiH~dlkp~Nil~~~~~~-~kL~dfG~~~~  158 (279)
T cd05109         120 KGMSYLEEVRLVHRDLAARNVLVKSPNH-VKITDFGLARL  158 (279)
T ss_pred             HHHHHHHHCCeeccccccceEEEcCCCc-EEECCCCceee
Confidence            7899999999999999999999998888 99999999886

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG1345|consensus

Probab=99.58  E-value=1.5e-16  Score=113.31  Aligned_cols=86  Identities=33%  Similarity=0.489  Sum_probs=64.3

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cccCchhHHHHH--------------------------------H
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITNDTNSILRFL--------------------------------L   65 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~~~~~~~~~--------------------------------~   65 (127)
                      ..+.|.+.+.||+|.||.+.+|+++.         ..........++                                +
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            34779999999999999999999987         000000111122                                2


Q ss_pred             Hhhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEe-cCCCeEEEEeccccee
Q psy7471          66 LLLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLD-AGGSLLKLADFGRCAR  112 (127)
Q Consensus        66 ~~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~-~~~~~~kl~dfg~a~~  112 (127)
                      +|+..|+                       +|+.|||+++++|||||.+|||+- .+..++||||||+.+.
T Consensus       102 E~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k  172 (378)
T KOG1345|consen  102 EFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRK  172 (378)
T ss_pred             ccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccc
Confidence            2555554                       899999999999999999999975 4444699999999876

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.58  E-value=3.2e-16  Score=114.77  Aligned_cols=39  Identities=49%  Similarity=1.016  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. ++|+|||+++.
T Consensus       106 ~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~kL~Dfg~~~~  144 (323)
T cd05595         106 SALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKE  144 (323)
T ss_pred             HHHHHHHHCCeEecCCCHHHEEEcCCCC-EEecccHHhcc
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.58  E-value=9.9e-16  Score=113.66  Aligned_cols=39  Identities=36%  Similarity=0.623  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||.||+++.++. +||+|||+++.
T Consensus       137 ~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~kL~DfG~a~~  175 (364)
T cd07875         137 CGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFGLART  175 (364)
T ss_pred             HHHHHHhhCCeecCCCCHHHEEECCCCc-EEEEeCCCccc
Confidence            7899999999999999999999999998 99999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.57  E-value=8.8e-15  Score=104.81  Aligned_cols=39  Identities=33%  Similarity=0.636  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||||+||+++.++. ++|+|||+++.
T Consensus       111 ~~L~~lH~~~i~H~dlkp~Nill~~~~~-~kl~Dfg~~~~  149 (287)
T cd07848         111 KAIHWCHKNDIVHRDIKPENLLISHNDV-LKLCDFGFARN  149 (287)
T ss_pred             HHHHHHHHCCeecCCCCHHHEEEcCCCc-EEEeeccCccc
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.57  E-value=1.2e-15  Score=111.56  Aligned_cols=39  Identities=41%  Similarity=0.610  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       114 ~aL~~LH~~~ivH~dlkp~NIll~~~~~-~kL~Dfg~~~~  152 (338)
T cd07859         114 RALKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARV  152 (338)
T ss_pred             HHHHHHHHCCeecCCCCHHHeEECCCCc-EEEccCccccc
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG4236|consensus

Probab=99.57  E-value=2.7e-15  Score=114.99  Aligned_cols=40  Identities=38%  Similarity=0.577  Sum_probs=35.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCC--eEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGS--LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~--~~kl~dfg~a~~  112 (127)
                      .|+.|||.++|+|.||||+|+|+.+...  ++||||||+|+.
T Consensus       675 ~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi  716 (888)
T KOG4236|consen  675 VALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARI  716 (888)
T ss_pred             HHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceee
Confidence            7899999999999999999999975432  499999999998

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.57  E-value=9.1e-15  Score=106.10  Aligned_cols=85  Identities=31%  Similarity=0.463  Sum_probs=64.8

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cc--c------CchhHHHHHHH-----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------IT--N------DTNSILRFLLL-----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--~------~~~~~~~~~~~-----------------------   66 (127)
                      .+++|++.+.||+|+||.||+|+.+.         +.  .      ....|..++..                       
T Consensus         4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   83 (309)
T cd07872           4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF   83 (309)
T ss_pred             CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence            46889999999999999999998764         00  0      01123333332                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+..                        .|+.|||+++++||||||.||+++..+. ++|+|||+++.
T Consensus        84 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~-~kl~Dfg~~~~  153 (309)
T cd07872          84 EYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGE-LKLADFGLARA  153 (309)
T ss_pred             eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC-EEECcccccee
Confidence             221100                        7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.57  E-value=8.7e-15  Score=107.44  Aligned_cols=86  Identities=29%  Similarity=0.403  Sum_probs=66.4

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------ccc--C------chhHHHHHHH----------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN--D------TNSILRFLLL----------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~--~------~~~~~~~~~~----------------------   66 (127)
                      +..++|++.+.||+|+||.||+++++.         +..  .      ...|..++..                      
T Consensus         2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (331)
T cd06649           2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   81 (331)
T ss_pred             CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            457899999999999999999999875         100  0      1123333332                      


Q ss_pred             --hhcchh------------------------HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --LLCAGD------------------------ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~------------------------~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                        |+.+++                        .|+.|||++ +++|+||||.||+++.++. ++|+|||+++.
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~-~kl~Dfg~~~~  153 (331)
T cd06649          82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE-IKLCDFGVSGQ  153 (331)
T ss_pred             eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCc-EEEccCccccc
Confidence              444443                        789999986 6999999999999999998 99999999875

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.57  E-value=5.3e-16  Score=113.37  Aligned_cols=39  Identities=64%  Similarity=1.135  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. ++|+|||+++.
T Consensus       107 ~al~~LH~~~ivHrdikp~Nil~~~~~~-~kl~Dfg~~~~  145 (316)
T cd05619         107 CGLQFLHSKGIVYRDLKLDNILLDTDGH-IKIADFGMCKE  145 (316)
T ss_pred             HHHHHHHhCCeEeCCCCHHHEEECCCCC-EEEccCCcceE
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.57  E-value=1e-15  Score=108.86  Aligned_cols=39  Identities=21%  Similarity=0.387  Sum_probs=36.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.+.. ++++|||.+..
T Consensus       118 ~al~~lH~~~iiH~dikp~nili~~~~~-~~l~dfg~~~~  156 (266)
T cd05064         118 SGMKYLSEMGYVHKGLAAHKVLVNSDLV-CKISGFRRLQE  156 (266)
T ss_pred             HHHHHHHHCCEeeccccHhhEEEcCCCc-EEECCCccccc
Confidence            7899999999999999999999999888 99999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.57  E-value=1.2e-15  Score=109.42  Aligned_cols=39  Identities=54%  Similarity=0.777  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. ++|+|||+++.
T Consensus       121 ~aL~~lH~~~iiH~dlkp~Nil~~~~~~-~kl~Dfg~~~~  159 (290)
T cd07862         121 RGLDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFGLARI  159 (290)
T ss_pred             HHHHHHHHCCeeeCCCCHHHEEEcCCCC-EEEccccceEe
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.57  E-value=7.1e-16  Score=112.86  Aligned_cols=39  Identities=56%  Similarity=1.015  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++. ++|+|||+++.
T Consensus       111 ~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~kl~Dfg~~~~  149 (323)
T cd05584         111 LALEHLHQQGIIYRDLKPENILLDAQGH-VKLTDFGLCKE  149 (323)
T ss_pred             HHHHHHHHCCeecCCCCHHHeEECCCCC-EEEeeCcCCee
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.56  E-value=1.3e-15  Score=107.70  Aligned_cols=88  Identities=25%  Similarity=0.469  Sum_probs=67.7

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------cccCc------hhHHHHHHH-----------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITNDT------NSILRFLLL-----------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~~------~~~~~~~~~-----------------------   66 (127)
                      |.+..++|++.+.||+|+||.||+|....        .....      ..+..++..                       
T Consensus         1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05072           1 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT   80 (261)
T ss_pred             CcCchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence            56788999999999999999999998754        11001      022223222                       


Q ss_pred             -hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+++                          .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~-~~l~dfg~~~~  152 (261)
T cd05072          81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLM-CKIADFGLARV  152 (261)
T ss_pred             ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCc-EEECCCcccee
Confidence             333332                          7899999999999999999999999998 99999999886

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.56  E-value=2.7e-14  Score=107.24  Aligned_cols=85  Identities=25%  Similarity=0.395  Sum_probs=64.2

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc-----------cc--cCchhHHHHHHH------------------------hhc
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS-----------IT--NDTNSILRFLLL------------------------LLC   69 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~-----------~~--~~~~~~~~~~~~------------------------~~~   69 (127)
                      ...+|++.+.||+|+||.||+|...+           ..  .....|+.++..                        ++.
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  169 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK  169 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC
Confidence            34569999999999999999997643           00  011244444443                        111


Q ss_pred             chh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          70 AGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        70 ~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +..                       .||.|||.++|+||||||.||+++..+. ++|+|||+++.
T Consensus       170 ~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~-~~l~DfG~a~~  234 (392)
T PHA03207        170 CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPEN-AVLGDFGAACK  234 (392)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCC-EEEccCccccc
Confidence            100                       7899999999999999999999999998 99999999875

>KOG0660|consensus

Probab=99.56  E-value=3.7e-15  Score=108.90  Aligned_cols=40  Identities=40%  Similarity=0.620  Sum_probs=38.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK  113 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~  113 (127)
                      .|+.|+|+.+++||||||.|++++.++. +|++|||+|+..
T Consensus       136 rgLKyiHSAnViHRDLKPsNll~n~~c~-lKI~DFGLAR~~  175 (359)
T KOG0660|consen  136 RGLKYIHSANVIHRDLKPSNLLLNADCD-LKICDFGLARYL  175 (359)
T ss_pred             HhcchhhcccccccccchhheeeccCCC-EEeccccceeec
Confidence            6799999999999999999999999999 999999999974

>KOG4645|consensus

Probab=99.56  E-value=5.8e-15  Score=121.38  Aligned_cols=81  Identities=31%  Similarity=0.491  Sum_probs=70.5

Q ss_pred             eEEEEEeceeCCceEEEEEEcc------------------------------------------cccCchhHHHHHHHhh
Q psy7471          31 FHFIKVLGKGSFGKELFGHYRS------------------------------------------ITNDTNSILRFLLLLL   68 (127)
Q Consensus        31 ~~~~~~lg~G~fg~V~~~~~~~------------------------------------------~~~~~~~~~~~~~~~~   68 (127)
                      ++-...||.|.||.||.|.+.+                                          .+.....+..|+|+||
T Consensus      1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence            3456689999999999998876                                          1122337788999999


Q ss_pred             cchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          69 CAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        69 ~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+|+                        .|+.|||..+|+|||+||+||+++.++. +|+.|||.|..
T Consensus      1317 ~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~-iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGL-IKYGDFGSAVK 1383 (1509)
T ss_pred             ccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCc-EEeecccceeE
Confidence            9997                        8999999999999999999999999998 99999999987

>KOG4721|consensus

Probab=99.56  E-value=8.6e-16  Score=118.41  Aligned_cols=102  Identities=22%  Similarity=0.387  Sum_probs=79.0

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc-------cccCchhH------------------------HHHHHHhhc
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------ITNDTNSI------------------------LRFLLLLLC   69 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~~~~~------------------------~~~~~~~~~   69 (127)
                      ...|+++.+...-+++||.|+-|.||+|+.++       +...++.+                        ..|+|+||.
T Consensus       116 ~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa  195 (904)
T KOG4721|consen  116 EELWEIPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCA  195 (904)
T ss_pred             hhhccCCHHHhhhhhhhccCcccceeeeeccCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccc
Confidence            34578888888889999999999999999987       11112211                        223455776


Q ss_pred             chh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceecCc----ccceee
Q psy7471          70 AGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKI----KLFCDL  121 (127)
Q Consensus        70 ~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~~----~~~~gt  121 (127)
                      .|.                        .|+.|||.++|||||||..|||+..+.. |||+|||.+++...    -.|+||
T Consensus       196 ~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~-VKIsDFGTS~e~~~~STkMSFaGT  274 (904)
T KOG4721|consen  196 QGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDV-VKISDFGTSKELSDKSTKMSFAGT  274 (904)
T ss_pred             cccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccce-EEeccccchHhhhhhhhhhhhhhh
Confidence            664                        7899999999999999999999999998 99999999998221    367887


Q ss_pred             EE
Q psy7471         122 LI  123 (127)
Q Consensus       122 ~~  123 (127)
                      ..
T Consensus       275 Va  276 (904)
T KOG4721|consen  275 VA  276 (904)
T ss_pred             Hh
Confidence            53

>KOG4279|consensus

Probab=99.56  E-value=1.4e-15  Score=119.55  Aligned_cols=50  Identities=36%  Similarity=0.604  Sum_probs=44.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee-----cCcccceeeE
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFCDLL  122 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~-----~~~~~~~gt~  122 (127)
                      +|+.|||.+.|+|||||-+|+|+......+||+|||.++.     ..+.||+|||
T Consensus       686 eGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTL  740 (1226)
T KOG4279|consen  686 EGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTL  740 (1226)
T ss_pred             HHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccch
Confidence            8999999999999999999999987654499999999987     5567999987

>KOG0664|consensus

Probab=99.56  E-value=3.4e-15  Score=106.93  Aligned_cols=39  Identities=33%  Similarity=0.603  Sum_probs=37.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+|+||||||.|.|+.++.. +||||||+++.
T Consensus       167 RGLKYLHsA~ILHRDIKPGNLLVNSNCv-LKICDFGLARv  205 (449)
T KOG0664|consen  167 RGLKYLHTANILHRDIKPGNLLVNSNCI-LKICDFGLART  205 (449)
T ss_pred             hhhHHHhhcchhhccCCCccEEeccCce-EEecccccccc
Confidence            6899999999999999999999999998 99999999996

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.56  E-value=4.4e-15  Score=105.04  Aligned_cols=88  Identities=22%  Similarity=0.397  Sum_probs=66.9

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC------chhHHHHHHH-----------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND------TNSILRFLLL-----------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~------~~~~~~~~~~-----------------------   66 (127)
                      |++..++|++.+.||+|+||.||+|.+..        ....      ...+..++..                       
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05068           1 WEIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT   80 (261)
T ss_pred             CccchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence            45677889999999999999999998744        1000      0122222222                       


Q ss_pred             -hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+++                          .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~~l~dfg~~~~  152 (261)
T cd05068          81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNI-CKVADFGLARV  152 (261)
T ss_pred             ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCC-EEECCcceEEE
Confidence             332322                          7899999999999999999999999999 99999999876

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.55  E-value=1.8e-15  Score=111.64  Aligned_cols=39  Identities=33%  Similarity=0.533  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       190 ~al~~lH~~~i~H~dikp~Nil~~~~~~-~kl~dfg~~~~  228 (343)
T cd05103         190 KGMEFLASRKCIHRDLAARNILLSENNV-VKICDFGLARD  228 (343)
T ss_pred             HHHHHHHhCCeecCCCccCeEEEcCCCc-EEEEecccccc
Confidence            5799999999999999999999999888 99999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0033|consensus

Probab=99.55  E-value=2.5e-16  Score=110.95  Aligned_cols=87  Identities=29%  Similarity=0.451  Sum_probs=65.4

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------------cc----cCchhHHHHHHH---------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------------IT----NDTNSILRFLLL---------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~----~~~~~~~~~~~~---------------------   66 (127)
                      ...+.|++.++||+|.|++||+|.++.              +.    +..+.|.+|-..                     
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl   87 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   87 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence            345789999999999999999998876              00    111233333222                     


Q ss_pred             ---hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC--eEEEEeccccee
Q psy7471          67 ---LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS--LLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~--~~kl~dfg~a~~  112 (127)
                         ++.|++                        +|+.|+|.++|+|||+||+|+++.+...  .+||+|||+|.+
T Consensus        88 vFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~  162 (355)
T KOG0033|consen   88 VFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE  162 (355)
T ss_pred             EEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEE
Confidence               344444                        8999999999999999999999976532  499999999998

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.55  E-value=2e-15  Score=109.50  Aligned_cols=39  Identities=31%  Similarity=0.459  Sum_probs=36.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       135 ~al~~LH~~gi~H~dlkp~Nili~~~~~-~kl~dfg~~~~  173 (303)
T cd05088         135 RGMDYLSQKQFIHRDLAARNILVGENYV-AKIADFGLSRG  173 (303)
T ss_pred             HHHHHHHhCCccccccchheEEecCCCc-EEeCccccCcc
Confidence            6799999999999999999999999998 99999999864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.55  E-value=2.2e-15  Score=107.90  Aligned_cols=39  Identities=33%  Similarity=0.549  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.+.. +||+|||+++.
T Consensus       120 ~~l~~lH~~~iiH~dlkp~nili~~~~~-~kl~Dfg~~~~  158 (279)
T cd05111         120 KGMYYLEEHRMVHRNLAARNILLKSDSI-VQIADFGVADL  158 (279)
T ss_pred             HHHHHHHHCCEeccccCcceEEEcCCCc-EEEcCCcccee
Confidence            7899999999999999999999999888 99999999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0599|consensus

Probab=99.55  E-value=5.7e-16  Score=110.68  Aligned_cols=49  Identities=37%  Similarity=0.674  Sum_probs=44.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee----cCcccceeeE
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR----KKIKLFCDLL  122 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~----~~~~~~~gt~  122 (127)
                      +|++|||.++|+||||||+|||++++.. ++|+|||+|..    .+...+|||.
T Consensus       134 egVeylHa~~IVHRDLKpENILlddn~~-i~isDFGFa~~l~~GekLrelCGTP  186 (411)
T KOG0599|consen  134 EGVEYLHARNIVHRDLKPENILLDDNMN-IKISDFGFACQLEPGEKLRELCGTP  186 (411)
T ss_pred             HHHHHHHHhhhhhcccChhheeeccccc-eEEeccceeeccCCchhHHHhcCCC
Confidence            7899999999999999999999999999 99999999987    4557788874

>PTZ00284 protein kinase; Provisional

Probab=99.54  E-value=2.2e-14  Score=109.99  Aligned_cols=40  Identities=28%  Similarity=0.642  Sum_probs=34.2

Q ss_pred             HHHHHHHH-CCcEecCCCCCCEEEecCCC---------------eEEEEeccccee
Q psy7471          73 ACLTFLHR-HGVVYRDLKLDNILLDAGGS---------------LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~-~~iih~dlk~~nil~~~~~~---------------~~kl~dfg~a~~  112 (127)
                      .||.|||. .+|+||||||+|||++..+.               .+||+|||++..
T Consensus       242 ~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~  297 (467)
T PTZ00284        242 VALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD  297 (467)
T ss_pred             HHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence            78999998 59999999999999986541               289999998765

>KOG1006|consensus

Probab=99.54  E-value=1.9e-15  Score=107.48  Aligned_cols=91  Identities=30%  Similarity=0.489  Sum_probs=68.3

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc-----------cccCchhHHHHHHH-------------------hhcc
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS-----------ITNDTNSILRFLLL-------------------LLCA   70 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-----------~~~~~~~~~~~~~~-------------------~~~~   70 (127)
                      +.-+.+..++++-+..||.|+||+|++-.++.           .........+++++                   ....
T Consensus        56 ~~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E  135 (361)
T KOG1006|consen   56 AHLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE  135 (361)
T ss_pred             ccccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC
Confidence            33456667778888899999999999998887           11122234445544                   1111


Q ss_pred             hh----------------------------------------HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccc
Q psy7471          71 GD----------------------------------------ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGR  109 (127)
Q Consensus        71 g~----------------------------------------~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~  109 (127)
                      |+                                        .|+.||-.. +|||||+||.|||+++.+. +||||||.
T Consensus       136 GdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~-vKLCDFGI  214 (361)
T KOG1006|consen  136 GDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGD-VKLCDFGI  214 (361)
T ss_pred             CceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCC-Eeeecccc
Confidence            22                                        799999875 9999999999999999999 99999998


Q ss_pred             cee
Q psy7471         110 CAR  112 (127)
Q Consensus       110 a~~  112 (127)
                      +..
T Consensus       215 cGq  217 (361)
T KOG1006|consen  215 CGQ  217 (361)
T ss_pred             hHh
Confidence            765

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.54  E-value=2.2e-14  Score=116.83  Aligned_cols=40  Identities=43%  Similarity=0.654  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK  113 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~  113 (127)
                      .|+.|||+++|+||||||+||+++.++. ++|+|||+++..
T Consensus       124 ~AL~yLHs~GIIHRDLKPeNILLd~dg~-vKLiDFGLAk~i  163 (932)
T PRK13184        124 ATIEYVHSKGVLHRDLKPDNILLGLFGE-VVILDWGAAIFK  163 (932)
T ss_pred             HHHHHHHHCCccccCCchheEEEcCCCC-EEEEecCcceec
Confidence            5789999999999999999999999999 999999998763

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.54  E-value=2.6e-15  Score=111.77  Aligned_cols=39  Identities=36%  Similarity=0.647  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       114 ~aL~~LH~~~ivH~dlkp~Nili~~~~~-~kL~Dfg~a~~  152 (372)
T cd07853         114 RGLKYLHSAGILHRDIKPGNLLVNSNCV-LKICDFGLARV  152 (372)
T ss_pred             HHHHHHHhCCeeCCCCChHHEEECCCCC-EEeccccceee
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0984|consensus

Probab=99.54  E-value=7.1e-15  Score=101.41  Aligned_cols=39  Identities=41%  Similarity=0.708  Sum_probs=36.7

Q ss_pred             HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||++ .+||||+||.|||++..+. +|+||||.+-.
T Consensus       159 ~al~~L~~kL~vIHRDvKPsNiLIn~~Gq-VKiCDFGIsG~  198 (282)
T KOG0984|consen  159 HALEFLHSKLSVIHRDVKPSNILINYDGQ-VKICDFGISGY  198 (282)
T ss_pred             HHHHHHHHHhhhhhccCCcceEEEccCCc-EEEccccccee
Confidence            789999987 9999999999999999999 99999998776

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.54  E-value=1.8e-14  Score=106.02  Aligned_cols=39  Identities=31%  Similarity=0.629  Sum_probs=37.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||.||+++.++. +||+|||+++.
T Consensus       129 ~aL~~LH~~~ivHrdikp~Nil~~~~~~-~kl~Dfg~~~~  167 (343)
T cd07878         129 RGLKYIHSAGIIHRDLKPSNVAVNEDCE-LRILDFGLARQ  167 (343)
T ss_pred             HHHHHHHHCCeecccCChhhEEECCCCC-EEEcCCcccee
Confidence            7899999999999999999999999999 99999999887

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.54  E-value=1.5e-14  Score=106.39  Aligned_cols=86  Identities=30%  Similarity=0.418  Sum_probs=66.4

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------ccc--C------chhHHHHHHH----------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN--D------TNSILRFLLL----------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~--~------~~~~~~~~~~----------------------   66 (127)
                      +..++|++.+.||+|+||.||+|+++.         +..  .      ...|..++..                      
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   81 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence            456899999999999999999999874         100  1      1133333333                      


Q ss_pred             --hhcchh------------------------HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --LLCAGD------------------------ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~------------------------~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                        |+.+++                        .|+.|||+. +++|+||||.||+++.++. ++|+|||++..
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~-~kL~Dfg~~~~  153 (333)
T cd06650          82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE-IKLCDFGVSGQ  153 (333)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCC-EEEeeCCcchh
Confidence              444443                        789999985 7999999999999999998 99999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=2.8e-14  Score=102.56  Aligned_cols=39  Identities=46%  Similarity=0.747  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       113 ~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~~l~Dfg~~~~  151 (285)
T cd05605         113 CGLEDLHRERIVYRDLKPENILLDDYGH-IRISDLGLAVE  151 (285)
T ss_pred             HHHHHHHHCCcEecCCCHHHEEECCCCC-EEEeeCCCcee
Confidence            7899999999999999999999999988 99999999886

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.53  E-value=1.5e-14  Score=102.34  Aligned_cols=88  Identities=27%  Similarity=0.456  Sum_probs=67.7

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------ccc------CchhHHHHHHH-----------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITN------DTNSILRFLLL-----------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~------~~~~~~~~~~~-----------------------   66 (127)
                      |++..++|++.++||+|+||.||+|..+.        ...      +...|+.++..                       
T Consensus         1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e   80 (260)
T cd05067           1 WEVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITE   80 (260)
T ss_pred             CccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEE
Confidence            56778999999999999999999998755        110      11123333322                       


Q ss_pred             hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+++                          .|+.|||+.+++|+||+|.|++++.+.. ++|+|||+++.
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~-~~l~dfg~~~~  151 (260)
T cd05067          81 YMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLC-CKIADFGLARL  151 (260)
T ss_pred             cCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCC-EEEccCcceee
Confidence            222222                          7899999999999999999999999998 99999999876

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.53  E-value=2e-14  Score=102.04  Aligned_cols=88  Identities=24%  Similarity=0.399  Sum_probs=66.9

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC------chhHHHHHHH-----------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND------TNSILRFLLL-----------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~------~~~~~~~~~~-----------------------   66 (127)
                      |.+..++|++.+.||+|+||.||+|++..        ....      ...|+.++..                       
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e   80 (262)
T cd05071           1 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE   80 (262)
T ss_pred             CCCChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEE
Confidence            45677889999999999999999998755        1000      0122222222                       


Q ss_pred             hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+|+                          .|+.|+|+++++|+||+|.||+++.++. ++|+|||.++.
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~-~~L~dfg~~~~  151 (262)
T cd05071          81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-CKVADFGLARL  151 (262)
T ss_pred             cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCc-EEeccCCceee
Confidence            333332                          7899999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.53  E-value=3.8e-15  Score=105.17  Aligned_cols=88  Identities=23%  Similarity=0.395  Sum_probs=67.2

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC------chhHHHHHHH-----------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND------TNSILRFLLL-----------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~------~~~~~~~~~~-----------------------   66 (127)
                      |++..++|++.+.||+|+||.||+|..+.        +...      ...++.++..                       
T Consensus         1 ~~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (261)
T cd05034           1 WEIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT   80 (261)
T ss_pred             CccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence            56788999999999999999999998755        1100      0122222222                       


Q ss_pred             -hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+++                          .|+.|||.++++|+|++|.||+++.++. ++++|||+++.
T Consensus        81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~-~~l~d~g~~~~  152 (261)
T cd05034          81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLV-CKIADFGLARL  152 (261)
T ss_pred             eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCC-EEECcccccee
Confidence             222221                          6899999999999999999999999999 99999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.53  E-value=1.8e-15  Score=110.58  Aligned_cols=39  Identities=59%  Similarity=1.112  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       107 ~~l~~LH~~~ivH~dlkp~Nill~~~~~-~kl~Dfg~~~~  145 (318)
T cd05570         107 LGLQFLHERGIIYRDLKLDNVLLDSEGH-IKIADFGMCKE  145 (318)
T ss_pred             HHHHHHHhCCeEccCCCHHHeEECCCCc-EEecccCCCee
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.53  E-value=3.7e-15  Score=107.83  Aligned_cols=39  Identities=28%  Similarity=0.514  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       148 ~al~~LH~~givH~dlkp~Nili~~~~~-~kl~D~g~~~~  186 (304)
T cd05101         148 RGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARD  186 (304)
T ss_pred             HHHHHHHHCCeeecccccceEEEcCCCc-EEECCCcccee
Confidence            6799999999999999999999999888 99999999886

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.53  E-value=2.8e-14  Score=101.01  Aligned_cols=88  Identities=23%  Similarity=0.397  Sum_probs=67.6

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC------chhHHHHHHH-----------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND------TNSILRFLLL-----------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~------~~~~~~~~~~-----------------------   66 (127)
                      |++..++|++.+.||+|+||.||+|.+..        ....      ...|+.++..                       
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e   80 (260)
T cd05069           1 WEIPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTE   80 (260)
T ss_pred             CcCChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEE
Confidence            45677889999999999999999998755        1100      0123333332                       


Q ss_pred             hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+++                          .|+.|||+.+++|+||+|.|++++.++. ++|+|||+++.
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~-~~l~dfg~~~~  151 (260)
T cd05069          81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLV-CKIADFGLARL  151 (260)
T ss_pred             cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCe-EEECCCccceE
Confidence            333322                          7899999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0983|consensus

Probab=99.52  E-value=1.4e-14  Score=103.65  Aligned_cols=86  Identities=35%  Similarity=0.567  Sum_probs=64.8

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc-----------cccCchhHHHHHHH-------------------hhcchh---
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS-----------ITNDTNSILRFLLL-------------------LLCAGD---   72 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~-----------~~~~~~~~~~~~~~-------------------~~~~g~---   72 (127)
                      ...++++.+..||.|+-|+|++++++.           -...++...+|++.                   |+...+   
T Consensus        89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I  168 (391)
T KOG0983|consen   89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI  168 (391)
T ss_pred             cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH
Confidence            344556778889999999999999987           11233344555555                   011111   


Q ss_pred             ---------------------------------HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ---------------------------------ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ---------------------------------~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                                                       .|+.||..+ +|||||+||.|||+|..+. +|+||||.+..
T Consensus       169 cMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~Gn-iKlCDFGIsGr  241 (391)
T KOG0983|consen  169 CMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGN-IKLCDFGISGR  241 (391)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCC-EEeecccccce
Confidence                                             678888875 9999999999999999999 99999999876

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.52  E-value=5.7e-15  Score=104.69  Aligned_cols=88  Identities=23%  Similarity=0.408  Sum_probs=66.8

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc---------cccCc------hhHHHHHHH----------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITNDT------NSILRFLLL----------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~~------~~~~~~~~~----------------------   66 (127)
                      |++...+|.+.+.||+|+||.||+|.++.         .....      ..+..++..                      
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (263)
T cd05052           1 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   80 (263)
T ss_pred             CCCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEE
Confidence            45667789999999999999999998864         11110      122222222                      


Q ss_pred             --hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                        |+.+++                          .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~-~kl~df~~~~~  153 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRL  153 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCc-EEeCCCccccc
Confidence              333322                          7899999999999999999999999998 99999999876

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.52  E-value=2.9e-14  Score=100.25  Aligned_cols=39  Identities=49%  Similarity=0.890  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.+||+++++|+||+|.||+++.++. ++|+|||.+..
T Consensus       109 ~~L~~Lh~~~i~H~dikp~NIl~~~~~~-~~l~Dfg~~~~  147 (260)
T PF00069_consen  109 EALAYLHSKGIVHRDIKPENILLDENGE-VKLIDFGSSVK  147 (260)
T ss_dssp             HHHHHHHHTTEEESSBSGGGEEESTTSE-EEESSGTTTEE
T ss_pred             cccccccccccccccccccccccccccc-ccccccccccc
Confidence            7899999999999999999999998888 99999999874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.52  E-value=3.8e-15  Score=106.33  Aligned_cols=39  Identities=26%  Similarity=0.434  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||||.||+++.++. ++|+|||+++.
T Consensus       130 ~~l~~lH~~~~vH~dlkp~Nil~~~~~~-~~l~dfg~~~~  168 (277)
T cd05062         130 DGMAYLNANKFVHRDLAARNCMVAEDFT-VKIGDFGMTRD  168 (277)
T ss_pred             HHHHHHHHCCcccCCcchheEEEcCCCC-EEECCCCCccc
Confidence            6789999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG1163|consensus

Probab=99.52  E-value=3.1e-14  Score=100.26  Aligned_cols=40  Identities=33%  Similarity=0.584  Sum_probs=34.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecC--CCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAG--GSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~--~~~~kl~dfg~a~~  112 (127)
                      .-++|+|.++.|||||||+|+|..-.  ..++.++|||+|+.
T Consensus       122 ~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk  163 (341)
T KOG1163|consen  122 SRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK  163 (341)
T ss_pred             HHHHHHHhhccccccCCccceeeccccccceEEEEeccchhh
Confidence            56899999999999999999997633  33489999999997

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.52  E-value=2.3e-14  Score=101.13  Aligned_cols=85  Identities=27%  Similarity=0.527  Sum_probs=65.0

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc--------cccCc------hhHHHHHHH------------------------hh
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS--------ITNDT------NSILRFLLL------------------------LL   68 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~~------~~~~~~~~~------------------------~~   68 (127)
                      +.++|++.+.||+|+||.||+++++.        .....      ..|..++..                        |+
T Consensus         2 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~   81 (256)
T cd05114           2 NPSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM   81 (256)
T ss_pred             CHHHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence            45679999999999999999998865        11000      123333332                        33


Q ss_pred             cchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          69 CAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        69 ~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+|+                         .|+.|||.++++|+||+|.|++++.+.. ++++|||+++.
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~-~kl~d~g~~~~  149 (256)
T cd05114          82 ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGV-VKVSDFGMTRY  149 (256)
T ss_pred             CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCe-EEECCCCCccc
Confidence            3332                         7899999999999999999999999888 99999998875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.52  E-value=4.2e-14  Score=101.66  Aligned_cols=39  Identities=46%  Similarity=0.752  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+|+||+|.|++++.+.. ++|+|||++..
T Consensus       113 ~~l~~lH~~~iiH~dikp~Nili~~~~~-~kl~Dfg~~~~  151 (285)
T cd05632         113 CGLEDLHRENTVYRDLKPENILLDDYGH-IRISDLGLAVK  151 (285)
T ss_pred             HHHHHHHhCCeeecCCCHHHEEECCCCC-EEEecCCccee
Confidence            7899999999999999999999999888 99999999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.52  E-value=6.9e-14  Score=107.45  Aligned_cols=84  Identities=21%  Similarity=0.343  Sum_probs=64.3

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc------cc----cCchhHHHHHHH------------------------hhcch--
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS------IT----NDTNSILRFLLL------------------------LLCAG--   71 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~------~~----~~~~~~~~~~~~------------------------~~~~g--   71 (127)
                      ...|.+.+.||+|+||.||+|++..      +.    .....|..++..                        ++.+.  
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~  247 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYRSDLY  247 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccCCCHH
Confidence            3469999999999999999999875      10    111234444433                        00000  


Q ss_pred             ----------h------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          72 ----------D------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        72 ----------~------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                                +            .||.|||+++|+||||||.|||++.++. ++|+|||+++.
T Consensus       248 ~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~-vkL~DFGla~~  309 (461)
T PHA03211        248 TYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPED-ICLGDFGAACF  309 (461)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCC-EEEcccCCcee
Confidence                      0            7899999999999999999999999998 99999999876

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.52  E-value=1.8e-14  Score=101.82  Aligned_cols=88  Identities=27%  Similarity=0.477  Sum_probs=67.4

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------ccc------CchhHHHHHHH-----------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITN------DTNSILRFLLL-----------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~------~~~~~~~~~~~-----------------------   66 (127)
                      |++..++|++.+.||+|+||.||+|....        ...      ....|+.++..                       
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e   80 (260)
T cd05070           1 WEIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTE   80 (260)
T ss_pred             CCCchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEE
Confidence            56778899999999999999999998754        111      01123333332                       


Q ss_pred             hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+++                          .|+.|||+++++|+|++|.||+++.+.. ++|+|||++..
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~-~~l~dfg~~~~  151 (260)
T cd05070          81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLV-CKIADFGLARL  151 (260)
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCce-EEeCCceeeee
Confidence            222222                          7899999999999999999999999888 99999999876

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG1095|consensus

Probab=99.52  E-value=2.5e-14  Score=116.57  Aligned_cols=88  Identities=32%  Similarity=0.543  Sum_probs=72.0

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcccc----------------cCchhHHHHHHH---------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRSIT----------------NDTNSILRFLLL---------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~----------------~~~~~~~~~~~~---------------------   66 (127)
                      ..++.+..++.+.||+|.||.||.|+..+..                .+...+..+++|                     
T Consensus       687 p~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~  766 (1025)
T KOG1095|consen  687 PEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD  766 (1025)
T ss_pred             ccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence            4466788999999999999999999997711                112233334433                     


Q ss_pred             ---------hhcchh-------------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEe
Q psy7471          67 ---------LLCAGD-------------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLAD  106 (127)
Q Consensus        67 ---------~~~~g~-------------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~d  106 (127)
                               ||++|+                               .|+.||++++.|||||..+|+|++.... +||+|
T Consensus       767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~-VKIaD  845 (1025)
T KOG1095|consen  767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRV-VKIAD  845 (1025)
T ss_pred             CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCc-EEEcc
Confidence                     888887                               6899999999999999999999999977 99999


Q ss_pred             ccccee
Q psy7471         107 FGRCAR  112 (127)
Q Consensus       107 fg~a~~  112 (127)
                      ||+||.
T Consensus       846 FGlArD  851 (1025)
T KOG1095|consen  846 FGLARD  851 (1025)
T ss_pred             cchhHh
Confidence            999996

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.52  E-value=5.2e-15  Score=105.30  Aligned_cols=39  Identities=26%  Similarity=0.418  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       130 ~~l~~lH~~~i~H~di~p~nill~~~~~-~kl~dfg~~~~  168 (277)
T cd05032         130 DGMAYLAAKKFVHRDLAARNCMVAEDLT-VKIGDFGMTRD  168 (277)
T ss_pred             HHHHHHHhCCccccccChheEEEcCCCC-EEECCcccchh
Confidence            6799999999999999999999999999 99999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG1187|consensus

Probab=99.52  E-value=1.2e-14  Score=108.54  Aligned_cols=85  Identities=28%  Similarity=0.426  Sum_probs=64.1

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc------------cc---cCchhHHHHHHH-------------------------hh
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS------------IT---NDTNSILRFLLL-------------------------LL   68 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~------------~~---~~~~~~~~~~~~-------------------------~~   68 (127)
                      ++|.-.+.||+|+||.||+|...+            ..   .+...|+.++..                         |+
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym  154 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYM  154 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEcc
Confidence            678888999999999999998876            00   011122323221                         44


Q ss_pred             cchh--------------------------HHHHHHHHC---CcEecCCCCCCEEEecCCCeEEEEecccceecC
Q psy7471          69 CAGD--------------------------ACLTFLHRH---GVVYRDLKLDNILLDAGGSLLKLADFGRCARKK  114 (127)
Q Consensus        69 ~~g~--------------------------~al~~lH~~---~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~  114 (127)
                      .+|+                          .||.|||..   .||||||||.|||+|.+.. .||+|||+|+...
T Consensus       155 ~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~-aKlsDFGLa~~~~  228 (361)
T KOG1187|consen  155 PNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN-AKLSDFGLAKLGP  228 (361)
T ss_pred             CCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC-EEccCccCcccCC
Confidence            4433                          689999985   4999999999999999999 9999999998743

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.52  E-value=3.1e-15  Score=109.10  Aligned_cols=39  Identities=51%  Similarity=0.868  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       109 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~kL~Dfg~~~~  147 (318)
T cd05582         109 LALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSKE  147 (318)
T ss_pred             HHHHHHHHCCEecCCCCHHHeEECCCCc-EEEeeccCCcc
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0587|consensus

Probab=99.51  E-value=1.5e-14  Score=115.32  Aligned_cols=95  Identities=28%  Similarity=0.459  Sum_probs=74.5

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------------cccCch------------------------------hH
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------------ITNDTN------------------------------SI   60 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------------~~~~~~------------------------------~~   60 (127)
                      ...+.|++.++||.|.+|.||+++++.               .....+                              .+
T Consensus        16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq   95 (953)
T KOG0587|consen   16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ   95 (953)
T ss_pred             CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence            345779999999999999999999987               000111                              33


Q ss_pred             HHHHHHhhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee--
Q psy7471          61 LRFLLLLLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR--  112 (127)
Q Consensus        61 ~~~~~~~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~--  112 (127)
                      ++++|+||.+|+                          .|+.+||.+.+||||+|-.|||+...+. +||+|||.+..  
T Consensus        96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~-VKLvDFGvSaQld  174 (953)
T KOG0587|consen   96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAE-VKLVDFGVSAQLD  174 (953)
T ss_pred             EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCc-EEEeeeeeeeeee
Confidence            344444888877                          6889999999999999999999999999 99999999887  


Q ss_pred             ---cCcccceee
Q psy7471         113 ---KKIKLFCDL  121 (127)
Q Consensus       113 ---~~~~~~~gt  121 (127)
                         ....|+.||
T Consensus       175 sT~grRnT~iGt  186 (953)
T KOG0587|consen  175 STVGRRNTFIGT  186 (953)
T ss_pred             cccccccCcCCC
Confidence               223456665

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.51  E-value=5.8e-15  Score=106.01  Aligned_cols=39  Identities=31%  Similarity=0.508  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       143 ~al~~LH~~~ivH~dlkp~Nil~~~~~~-~kL~Dfg~~~~  181 (293)
T cd05053         143 RGMEFLASKKCIHRDLAARNVLVTEDHV-MKIADFGLARD  181 (293)
T ss_pred             HHHHHHHHCCccccccceeeEEEcCCCe-EEeCccccccc
Confidence            6799999999999999999999999988 99999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.51  E-value=7.4e-15  Score=105.06  Aligned_cols=39  Identities=31%  Similarity=0.490  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||||.||+++.++. ++|+|||+++.
T Consensus       119 ~aL~~LH~~~i~H~dlkp~nili~~~~~-~~l~dfg~~~~  157 (284)
T cd05081         119 KGMEYLGSKRYVHRDLATRNILVESENR-VKIGDFGLTKV  157 (284)
T ss_pred             HHHHHHHHCCceeccCCHhhEEECCCCe-EEECCCccccc
Confidence            7899999999999999999999999998 99999999886

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.51  E-value=3.6e-14  Score=101.53  Aligned_cols=39  Identities=31%  Similarity=0.449  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.+.. ++|+|||+++.
T Consensus       135 ~al~~lH~~~i~H~dlkp~nili~~~~~-~kl~dfg~~~~  173 (283)
T cd05090         135 AGMEYLSSHFFVHKDLAARNILIGEQLH-VKISDLGLSRE  173 (283)
T ss_pred             HHHHHHHhcCeehhccccceEEEcCCCc-EEecccccccc
Confidence            6799999999999999999999999988 99999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.50  E-value=6.2e-14  Score=99.20  Aligned_cols=88  Identities=25%  Similarity=0.440  Sum_probs=67.7

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------cccCc------hhHHHHHHH-----------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITNDT------NSILRFLLL-----------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~~------~~~~~~~~~-----------------------   66 (127)
                      |++..++|++.+.||+|+||.||++....        .....      ..|+.++..                       
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e   80 (260)
T cd05073           1 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITE   80 (260)
T ss_pred             CcccccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEE
Confidence            67889999999999999999999998644        11111      123333332                       


Q ss_pred             hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+++                          .|+.|||+++++|+||+|.|++++.... ++|+|||++..
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~-~~l~d~~~~~~  151 (260)
T cd05073          81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV-CKIADFGLARV  151 (260)
T ss_pred             eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCc-EEECCCcceee
Confidence            232222                          7899999999999999999999999988 99999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.50  E-value=6.3e-14  Score=100.82  Aligned_cols=39  Identities=44%  Similarity=0.744  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++..+. ++|+|||++..
T Consensus       113 ~~l~~lH~~~iiH~dikp~Nil~~~~~~-~~l~Dfg~~~~  151 (285)
T cd05630         113 CGLEDLHQERIVYRDLKPENILLDDHGH-IRISDLGLAVH  151 (285)
T ss_pred             HHHHHHHhCCEEeCCCCHHHEEECCCCC-EEEeeccceee
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0668|consensus

Probab=99.50  E-value=1.9e-15  Score=105.72  Aligned_cols=86  Identities=22%  Similarity=0.434  Sum_probs=66.5

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc------c-------ccCchhHHHHHHHhhcchh---------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS------I-------TNDTNSILRFLLLLLCAGD---------------------   72 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~------~-------~~~~~~~~~~~~~~~~~g~---------------------   72 (127)
                      ..++|++.+.+|+|-|++||.|.+..      +       ......|+.|+.....+.+                     
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE  115 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE  115 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence            56889999999999999999998654      0       0111244445444222211                     


Q ss_pred             ---------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ---------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ---------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                                                 .|+.|||++||+|||+||.|++++.....++|+|+|+|..
T Consensus       116 ~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF  182 (338)
T KOG0668|consen  116 YVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF  182 (338)
T ss_pred             hhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhh
Confidence                                       7999999999999999999999998766599999999987

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.50  E-value=1e-14  Score=107.01  Aligned_cols=39  Identities=28%  Similarity=0.512  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       145 ~al~~LH~~givH~dlkp~Nill~~~~~-~kL~Dfg~~~~  183 (334)
T cd05100         145 RGMEYLASQKCIHRDLAARNVLVTEDNV-MKIADFGLARD  183 (334)
T ss_pred             HHHHHHHHCCeeccccccceEEEcCCCc-EEECCccccee
Confidence            6789999999999999999999999988 99999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.50  E-value=4.4e-14  Score=100.18  Aligned_cols=39  Identities=33%  Similarity=0.503  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.++. ++|+|||+++.
T Consensus       117 ~~l~~Lh~~~i~H~di~p~nili~~~~~-~~l~dfg~~~~  155 (266)
T cd05033         117 SGMKYLSEMNYVHRDLAARNILVNSNLV-CKVSDFGLSRR  155 (266)
T ss_pred             HHHHHHHhCCcccCCCCcceEEEcCCCC-EEECccchhhc
Confidence            6889999999999999999999999998 99999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.50  E-value=1.5e-14  Score=104.82  Aligned_cols=39  Identities=28%  Similarity=0.504  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       120 ~~L~~LH~~~ivH~dikp~Nill~~~~~-~kL~Dfg~~~~  158 (303)
T cd05110         120 KGMMYLEERRLVHRDLAARNVLVKSPNH-VKITDFGLARL  158 (303)
T ss_pred             HHHHHHhhcCeeccccccceeeecCCCc-eEEcccccccc
Confidence            7899999999999999999999998888 99999999875

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.50  E-value=7.6e-15  Score=106.44  Aligned_cols=39  Identities=28%  Similarity=0.507  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       151 ~aL~~lH~~gi~H~dlkp~Nill~~~~~-~kL~dfg~a~~  189 (307)
T cd05098         151 RGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARD  189 (307)
T ss_pred             HHHHHHHHCCcccccccHHheEEcCCCc-EEECCCccccc
Confidence            6899999999999999999999999988 99999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.50  E-value=3e-14  Score=101.10  Aligned_cols=39  Identities=26%  Similarity=0.473  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.+.. ++|+|||+++.
T Consensus       123 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~  161 (272)
T cd05075         123 SGMEYLSSKSFIHRDLAARNCMLNENMN-VCVADFGLSKK  161 (272)
T ss_pred             HHHHHHHHCCeeccccchhheEEcCCCC-EEECCCCcccc
Confidence            6899999999999999999999999888 99999999886

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.49  E-value=9.5e-15  Score=106.31  Aligned_cols=39  Identities=28%  Similarity=0.512  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       145 ~aL~~lH~~gi~H~dlkp~Nill~~~~~-~kL~Dfg~~~~  183 (314)
T cd05099         145 RGMEYLESRRCIHRDLAARNVLVTEDNV-MKIADFGLARG  183 (314)
T ss_pred             HHHHHHHHCCeeeccccceeEEEcCCCc-EEEcccccccc
Confidence            6899999999999999999999999998 99999999975

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.49  E-value=9e-15  Score=103.87  Aligned_cols=39  Identities=33%  Similarity=0.493  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+|++|.|++++.+.. ++++|||+++.
T Consensus       117 ~~l~~lH~~~i~h~dlkp~nili~~~~~-~~l~dfg~~~~  155 (267)
T cd05066         117 SGMKYLSDMGYVHRDLAARNILVNSNLV-CKVSDFGLSRV  155 (267)
T ss_pred             HHHHHHHHCCEeehhhchhcEEECCCCe-EEeCCCCcccc
Confidence            7899999999999999999999999888 99999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG1152|consensus

Probab=99.49  E-value=7.1e-14  Score=107.85  Aligned_cols=49  Identities=39%  Similarity=0.695  Sum_probs=43.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceecC---cccceeeE
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK---IKLFCDLL  122 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~---~~~~~gt~  122 (127)
                      .|+++||+.+|+|||+|-+|++++.++. +||+|||.|...+   ..+|.||+
T Consensus       681 agi~hlh~~~ivhrdikdenvivd~~g~-~klidfgsaa~~ksgpfd~f~gtv  732 (772)
T KOG1152|consen  681 AGIKHLHDQGIVHRDIKDENVIVDSNGF-VKLIDFGSAAYTKSGPFDVFVGTV  732 (772)
T ss_pred             hccccccccCceecccccccEEEecCCe-EEEeeccchhhhcCCCcceeeeec
Confidence            6789999999999999999999999999 9999999988744   35667775

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.49  E-value=1.3e-14  Score=102.63  Aligned_cols=85  Identities=28%  Similarity=0.545  Sum_probs=64.2

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc--------cccCc------hhHHHHHHH------------------------hh
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS--------ITNDT------NSILRFLLL------------------------LL   68 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~~------~~~~~~~~~------------------------~~   68 (127)
                      ..++|++.+.||+|+||.||+|.+.+        +....      ..+..++..                        |+
T Consensus         2 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd05113           2 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM   81 (256)
T ss_pred             ChHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence            45679999999999999999998765        11000      112222222                        33


Q ss_pred             cchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          69 CAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        69 ~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+++                         .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus        82 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~-~kl~d~g~~~~  149 (256)
T cd05113          82 SNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGC-VKVSDFGLSRY  149 (256)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCC-EEECCCcccee
Confidence            3332                         7899999999999999999999999888 99999999875

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.49  E-value=1.4e-14  Score=104.59  Aligned_cols=39  Identities=28%  Similarity=0.459  Sum_probs=36.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.+.. +||+|||++..
T Consensus       130 ~al~~lH~~~ivH~dlkp~Nill~~~~~-~kl~dfg~~~~  168 (297)
T cd05089         130 TGMQYLSEKQFIHRDLAARNVLVGENLA-SKIADFGLSRG  168 (297)
T ss_pred             HHHHHHHHCCcccCcCCcceEEECCCCe-EEECCcCCCcc
Confidence            5899999999999999999999999888 99999999864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.49  E-value=1.8e-14  Score=117.97  Aligned_cols=90  Identities=30%  Similarity=0.485  Sum_probs=64.5

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc---------ccc---Cc------hhHHHHHH------------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN---DT------NSILRFLL------------------   65 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~---~~------~~~~~~~~------------------   65 (127)
                      ...+..+++|++.+.||+|+||.||+|+++.         +..   ..      ..|+.++.                  
T Consensus         6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~   85 (1021)
T PTZ00266          6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA   85 (1021)
T ss_pred             cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence            3455677899999999999999999998865         000   00      01222222                  


Q ss_pred             --------Hhhcchh----------------------------HHHHHHHHC-------CcEecCCCCCCEEEecC----
Q psy7471          66 --------LLLCAGD----------------------------ACLTFLHRH-------GVVYRDLKLDNILLDAG----   98 (127)
Q Consensus        66 --------~~~~~g~----------------------------~al~~lH~~-------~iih~dlk~~nil~~~~----   98 (127)
                              +|+.+++                            .||.|||..       +|+|+||||.|||++..    
T Consensus        86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l  165 (1021)
T PTZ00266         86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI  165 (1021)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence                    2443332                            789999984       59999999999999642    


Q ss_pred             -------------CCeEEEEeccccee
Q psy7471          99 -------------GSLLKLADFGRCAR  112 (127)
Q Consensus        99 -------------~~~~kl~dfg~a~~  112 (127)
                                   .. +||+|||+++.
T Consensus       166 g~i~~~~~n~ng~~i-VKLsDFGlAr~  191 (1021)
T PTZ00266        166 GKITAQANNLNGRPI-AKIGDFGLSKN  191 (1021)
T ss_pred             ccccccccccCCCCc-eEEccCCcccc
Confidence                         23 89999999886

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.49  E-value=1.4e-14  Score=109.40  Aligned_cols=39  Identities=36%  Similarity=0.564  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||||.||+++.+.. ++|+|||+++.
T Consensus       248 ~aL~~LH~~~ivH~dikp~Nill~~~~~-~kL~DfGla~~  286 (400)
T cd05105         248 RGMEFLASKNCVHRDLAARNVLLAQGKI-VKICDFGLARD  286 (400)
T ss_pred             HHHHHHHhCCeeCCCCChHhEEEeCCCE-EEEEeCCccee
Confidence            5789999999999999999999999888 99999999876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0604|consensus

Probab=99.48  E-value=1.9e-14  Score=103.85  Aligned_cols=87  Identities=29%  Similarity=0.426  Sum_probs=64.8

Q ss_pred             cCCCeEEE-EEeceeCCceEEEEEEcc--------cccC--------------------------------chhHHHHHH
Q psy7471          27 GLEDFHFI-KVLGKGSFGKELFGHYRS--------ITND--------------------------------TNSILRFLL   65 (127)
Q Consensus        27 ~~~~~~~~-~~lg~G~fg~V~~~~~~~--------~~~~--------------------------------~~~~~~~~~   65 (127)
                      ..++|.+- .+||-|-.|.|..|.++.        +..+                                ...-+-+++
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVm  138 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVM  138 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeee
Confidence            34778774 589999999999999987        0000                                001111344


Q ss_pred             Hhhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCC--CeEEEEecccceec
Q psy7471          66 LLLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGG--SLLKLADFGRCARK  113 (127)
Q Consensus        66 ~~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~--~~~kl~dfg~a~~~  113 (127)
                      ++++||+                          .|+.|||+.+|.||||||+|+|.....  ..+||+|||+|++.
T Consensus       139 E~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t  214 (400)
T KOG0604|consen  139 ECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET  214 (400)
T ss_pred             ecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccccc
Confidence            5677776                          789999999999999999999987542  24899999999983

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.48  E-value=3.6e-15  Score=105.25  Aligned_cols=87  Identities=28%  Similarity=0.433  Sum_probs=65.1

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc--------ccc-------CchhHHHHHHH-----------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITN-------DTNSILRFLLL-----------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~-------~~~~~~~~~~~-----------------------   66 (127)
                      +....+|++.+.||+|+||.||+|+++.        +..       ....++.++..                       
T Consensus         2 ~~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (261)
T cd05148           2 ERPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT   81 (261)
T ss_pred             cCcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence            4456789999999999999999998865        000       00112222221                       


Q ss_pred             -hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+++                          .|+.|||.++++|+|++|.||+++.+.. ++|+|||++..
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~-~kl~d~g~~~~  153 (261)
T cd05148          82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLV-CKVADFGLARL  153 (261)
T ss_pred             eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCce-EEEccccchhh
Confidence             333322                          7899999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.48  E-value=1.7e-13  Score=98.10  Aligned_cols=83  Identities=30%  Similarity=0.478  Sum_probs=63.8

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------cccC--ch------hHHHHHHH------------------------h
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------ITND--TN------SILRFLLL------------------------L   67 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~--~~------~~~~~~~~------------------------~   67 (127)
                      ++|++.++||+|+||.||+|.+..         ....  ..      .|+.++..                        |
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            468899999999999999998754         1111  11      23333322                        3


Q ss_pred             hcchh--------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          68 LCAGD--------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        68 ~~~g~--------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +.+++                    .|+.|||+.+++|+||+|.||+++.++. ++|+|||++..
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~-~~l~dfg~~~~  144 (279)
T cd06619          81 MDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQ-VKLCDFGVSTQ  144 (279)
T ss_pred             CCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCC-EEEeeCCccee
Confidence            33332                    7899999999999999999999999999 99999999875

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.48  E-value=1.3e-13  Score=98.69  Aligned_cols=39  Identities=51%  Similarity=0.781  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       119 ~al~~lH~~~ivH~dikp~Nili~~~~~-~kl~dfg~~~~  157 (288)
T cd07863         119 RGLDFLHANCIVHRDLKPENILVTSGGQ-VKLADFGLARI  157 (288)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEECCCCC-EEECccCcccc
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.48  E-value=4.6e-14  Score=101.74  Aligned_cols=39  Identities=31%  Similarity=0.457  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.|++++.+.. +||+|||+++.
T Consensus       140 ~al~~lH~~~i~H~dlkp~Nill~~~~~-~kl~dfg~~~~  178 (295)
T cd05097         140 SGMKYLASLNFVHRDLATRNCLVGNHYT-IKIADFGMSRN  178 (295)
T ss_pred             HHHHHHHhcCeeccccChhhEEEcCCCc-EEecccccccc
Confidence            6799999999999999999999998888 99999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.48  E-value=6.9e-14  Score=101.63  Aligned_cols=39  Identities=38%  Similarity=0.535  Sum_probs=34.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEe----cCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLD----AGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~----~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||+||++.    ..+. +||+|||+++.
T Consensus       119 ~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~-~kl~DfG~a~~  161 (317)
T cd07868         119 DGIHYLHANWVLHRDLKPANILVMGEGPERGR-VKIADMGFARL  161 (317)
T ss_pred             HHHHHHHhCCEEcCCCCHHHEEEecCCCCcCc-EEEeecCceec
Confidence            789999999999999999999994    3456 99999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.48  E-value=5.4e-14  Score=99.12  Aligned_cols=86  Identities=29%  Similarity=0.512  Sum_probs=65.0

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc-------cccC-----chhHHHHHHH-----------------------hhcc
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS-------ITND-----TNSILRFLLL-----------------------LLCA   70 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~-----~~~~~~~~~~-----------------------~~~~   70 (127)
                      +...+|++.+.||+|+||.||++...+       ....     ...+..++..                       |+.+
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~   82 (254)
T cd05083           3 LNLQKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSK   82 (254)
T ss_pred             ccHHHceeeeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCC
Confidence            456789999999999999999987655       0000     0122222222                       3333


Q ss_pred             hh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          71 GD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        71 g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ++                          .|+.|||.++++|+|++|.||+++.++. ++|+|||+++.
T Consensus        83 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~-~kl~Dfg~~~~  149 (254)
T cd05083          83 GNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGV-AKVSDFGLARV  149 (254)
T ss_pred             CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCc-EEECCCcccee
Confidence            22                          7899999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0196|consensus

Probab=99.48  E-value=1.7e-14  Score=114.14  Aligned_cols=91  Identities=25%  Similarity=0.346  Sum_probs=73.0

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc---------c-----------ccCchhH--------------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------I-----------TNDTNSI--------------------   60 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~-----------~~~~~~~--------------------   60 (127)
                      +...+++....+++++||.|.||+|+.|+.+.         +           ..+...|                    
T Consensus       621 eFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT  700 (996)
T KOG0196|consen  621 EFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT  700 (996)
T ss_pred             HhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe
Confidence            33457778889999999999999999999876         0           0001122                    


Q ss_pred             ----HHHHHHhhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccce
Q psy7471          61 ----LRFLLLLLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA  111 (127)
Q Consensus        61 ----~~~~~~~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~  111 (127)
                          .-|+.+||++|+                         .|+.||.+++.+||||..+|||++.+.. +|++|||++|
T Consensus       701 ks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLv-CKVsDFGLSR  779 (996)
T KOG0196|consen  701 KSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLV-CKVSDFGLSR  779 (996)
T ss_pred             cCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceE-EEecccccee
Confidence                223334888876                         7899999999999999999999999998 9999999999


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      .
T Consensus       780 v  780 (996)
T KOG0196|consen  780 V  780 (996)
T ss_pred             e
Confidence            7

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.48  E-value=8.9e-14  Score=99.33  Aligned_cols=39  Identities=28%  Similarity=0.508  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.++. ++|+|||+++.
T Consensus       120 ~~l~~LH~~~i~H~di~p~nil~~~~~~-~kL~dfg~~~~  158 (279)
T cd05057         120 KGMSYLEEKRLVHRDLAARNVLVKTPQH-VKITDFGLAKL  158 (279)
T ss_pred             HHHHHHHhCCEEecccCcceEEEcCCCe-EEECCCccccc
Confidence            7899999999999999999999999888 99999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.48  E-value=1.2e-13  Score=99.88  Aligned_cols=85  Identities=32%  Similarity=0.440  Sum_probs=64.7

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------ccc--------CchhHHHHHHH-----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITN--------DTNSILRFLLL-----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~--------~~~~~~~~~~~-----------------------   66 (127)
                      .+++|++.+.||+|+||.||+|+++.         +..        ....+..++..                       
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~   83 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   83 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence            46889999999999999999998864         100        01123333332                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+..                        .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus        84 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~dfg~~~~  153 (301)
T cd07873          84 EYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGE-LKLADFGLARA  153 (301)
T ss_pred             eccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCc-EEECcCcchhc
Confidence             221100                        7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0666|consensus

Probab=99.47  E-value=3.3e-14  Score=103.16  Aligned_cols=39  Identities=38%  Similarity=0.555  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecC----CCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAG----GSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~----~~~~kl~dfg~a~~  112 (127)
                      .|+.|||++=|+||||||.||++..+    +. +||+|||+++.
T Consensus       143 ~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~-VKIaDlGlaR~  185 (438)
T KOG0666|consen  143 DGVHYLHSNWVLHRDLKPANILVMGDGPERGR-VKIADLGLARL  185 (438)
T ss_pred             hhhHHHhhhheeeccCCcceEEEeccCCccCe-eEeecccHHHH
Confidence            78999999999999999999999877    66 99999999997

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.47  E-value=2.3e-14  Score=101.82  Aligned_cols=39  Identities=33%  Similarity=0.447  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.|++++.+.. ++++|||+++.
T Consensus       117 ~al~~lH~~g~~H~dl~p~nili~~~~~-~kl~dfg~~~~  155 (269)
T cd05065         117 AGMKYLSEMNYVHRDLAARNILVNSNLV-CKVSDFGLSRF  155 (269)
T ss_pred             HHHHHHHHCCEeecccChheEEEcCCCc-EEECCCccccc
Confidence            7899999999999999999999998888 99999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.47  E-value=5.8e-14  Score=103.58  Aligned_cols=39  Identities=33%  Similarity=0.531  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++|+||||||.||+++.++. ++|+|||+++.
T Consensus       184 ~aL~~lH~~~ivHrDikp~Nill~~~~~-vkL~DfG~a~~  222 (337)
T cd05054         184 RGMEFLASRKCIHRDLAARNILLSENNV-VKICDFGLARD  222 (337)
T ss_pred             HHHHHHHhCCeecCCCCcceEEEeCCCc-EEEeccccchh
Confidence            6889999999999999999999999888 99999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.47  E-value=8.2e-14  Score=100.47  Aligned_cols=39  Identities=31%  Similarity=0.476  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       141 ~al~~lH~~~i~H~dlkp~Nili~~~~~-~~l~dfg~~~~  179 (296)
T cd05095         141 SGMKYLSSLNFVHRDLATRNCLVGKNYT-IKIADFGMSRN  179 (296)
T ss_pred             HHHHHHHHCCeecccCChheEEEcCCCC-EEeccCccccc
Confidence            6799999999999999999999999888 99999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG4257|consensus

Probab=99.47  E-value=6.2e-15  Score=114.68  Aligned_cols=53  Identities=30%  Similarity=0.391  Sum_probs=46.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceecCcccceeeEEEec
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKL  126 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~~~~~~gt~~~~~  126 (127)
                      .|+.|||+.+.+||||..+|||+.+... +||+|||++|.....+++..-.+|+
T Consensus       502 talaYLeSkrfVHRDIAaRNiLVsSp~C-VKLaDFGLSR~~ed~~yYkaS~~kL  554 (974)
T KOG4257|consen  502 TALAYLESKRFVHRDIAARNILVSSPQC-VKLADFGLSRYLEDDAYYKASRGKL  554 (974)
T ss_pred             HHHHHHHhhchhhhhhhhhheeecCcce-eeecccchhhhccccchhhcccccc
Confidence            7999999999999999999999999999 9999999999977666655545443

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.47  E-value=1.5e-14  Score=103.53  Aligned_cols=39  Identities=38%  Similarity=0.708  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.+.. ++|+|||++..
T Consensus       106 ~al~~lH~~~ivH~dikp~Nili~~~~~-~~l~Dfg~~~~  144 (277)
T cd05607         106 CGILHLHSMDIVYRDMKPENVLLDDQGN-CRLSDLGLAVE  144 (277)
T ss_pred             HHHHHHHHCCEEEccCChHhEEEcCCCC-EEEeeceeeee
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.47  E-value=5.5e-14  Score=100.39  Aligned_cols=39  Identities=36%  Similarity=0.562  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       135 ~al~~lH~~~i~H~dlkp~Nil~~~~~~-~~L~dfg~~~~  173 (283)
T cd05048         135 AGMEYLSSHHFVHRDLAARNCLVGEGLT-VKISDFGLSRD  173 (283)
T ss_pred             HHHHHHHhCCeeccccccceEEEcCCCc-EEECCCcceee
Confidence            7899999999999999999999999988 99999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.47  E-value=9e-15  Score=103.29  Aligned_cols=39  Identities=28%  Similarity=0.539  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.++. ++++|||+++.
T Consensus       111 ~~l~~lH~~~i~H~dl~p~ni~i~~~~~-~kl~dfg~~~~  149 (256)
T cd05059         111 EAMEYLESNGFIHRDLAARNCLVGEDNV-VKVSDFGLARY  149 (256)
T ss_pred             HHHHHHHHCCcccccccHhhEEECCCCc-EEECCccccee
Confidence            7899999999999999999999999998 99999998875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.47  E-value=8.3e-14  Score=99.89  Aligned_cols=39  Identities=38%  Similarity=0.790  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       108 ~~l~~lH~~~i~H~dlkp~Nili~~~~~-~~l~dfg~~~~  146 (280)
T cd05608         108 SGLEHLHQRRIIYRDLKPENVLLDNDGN-VRISDLGLAVE  146 (280)
T ss_pred             HHHHHHHHCCcccCCCCHHHEEECCCCC-EEEeeCcccee
Confidence            7899999999999999999999999888 99999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.47  E-value=9.1e-14  Score=98.48  Aligned_cols=39  Identities=26%  Similarity=0.439  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|+||+||+++.+.. ++|+|||+++.
T Consensus       124 ~aL~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~dfg~~~~  162 (273)
T cd05035         124 LGMEYLSNRNFIHRDLAARNCMLREDMT-VCVADFGLSKK  162 (273)
T ss_pred             HHHHHHHhCCeeccccchheEEECCCCe-EEECCccceee
Confidence            6899999999999999999999999888 99999999886

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.47  E-value=1.2e-13  Score=98.03  Aligned_cols=39  Identities=33%  Similarity=0.485  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       111 ~~l~~lH~~~ivH~dlkp~Nill~~~~~-~kl~dfg~~~~  149 (269)
T cd05042         111 SGLLWLHQADFIHSDLALRNCQLTADLS-VKIGDYGLALE  149 (269)
T ss_pred             HHHHHHHhcCEecccccHhheEecCCCc-EEEeccccccc
Confidence            6799999999999999999999999998 99999999865

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.47  E-value=2.8e-14  Score=102.09  Aligned_cols=39  Identities=33%  Similarity=0.578  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.+.. ++|+|||+++.
T Consensus       118 ~~l~~lH~~~i~H~dlkp~Nili~~~~~-~~l~dfg~~~~  156 (283)
T cd05080         118 EGMAYLHSQHYIHRDLAARNVLLDNDRL-VKIGDFGLAKA  156 (283)
T ss_pred             HHHHHHHHCCeeccccChheEEEcCCCc-EEEeecccccc
Confidence            7899999999999999999999999988 99999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.46  E-value=1.8e-14  Score=103.25  Aligned_cols=39  Identities=28%  Similarity=0.484  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       120 ~aL~~lH~~gi~H~dlkp~Nil~~~~~~-~~l~dfg~~~~  158 (284)
T cd05079         120 KGMDYLGSRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKA  158 (284)
T ss_pred             HHHHHHHHCCeeecccchheEEEcCCCC-EEECCCccccc
Confidence            7899999999999999999999999988 99999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG1165|consensus

Probab=99.46  E-value=3.9e-13  Score=98.32  Aligned_cols=87  Identities=26%  Similarity=0.465  Sum_probs=63.3

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc------c--------ccCchhHHHHHHHhhc----------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS------I--------TNDTNSILRFLLLLLC----------------------   69 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~------~--------~~~~~~~~~~~~~~~~----------------------   69 (127)
                      +.--.|++.+.||+|+||+++.|.+.-      +        ..+...|.+.++....                      
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             EecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            444679999999999999999998754      1        1112234444433110                      


Q ss_pred             --chh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC----eEEEEeccccee
Q psy7471          70 --AGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS----LLKLADFGRCAR  112 (127)
Q Consensus        70 --~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~----~~kl~dfg~a~~  112 (127)
                        |.+                         .-++|+|++.+|.|||||+|+||.+.+.    .+.++|||+|++
T Consensus       105 LLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~  178 (449)
T KOG1165|consen  105 LLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE  178 (449)
T ss_pred             hhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence              000                         4588999999999999999999986543    389999999998

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.46  E-value=2.8e-14  Score=103.66  Aligned_cols=83  Identities=33%  Similarity=0.450  Sum_probs=63.4

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------ccc--C------chhHHHHHHH------------------------h
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------ITN--D------TNSILRFLLL------------------------L   67 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~~--~------~~~~~~~~~~------------------------~   67 (127)
                      ++|++.+.||+|+||.||++.+..         ...  .      ...|+.++..                        |
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            479999999999999999998764         100  0      1123333332                        3


Q ss_pred             hcchh------------------------HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          68 LCAGD------------------------ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        68 ~~~g~------------------------~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +.+++                        .|+.|||+ .+++|+|++|.||+++.++. ++|+|||+++.
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~  149 (308)
T cd06615          81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGE-IKLCDFGVSGQ  149 (308)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCc-EEEccCCCccc
Confidence            44433                        78999997 59999999999999999998 99999998875

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.46  E-value=4.9e-14  Score=100.56  Aligned_cols=39  Identities=38%  Similarity=0.714  Sum_probs=36.7

Q ss_pred             HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||++ +++|+||+|.||+++.++. +||+|||+++.
T Consensus       114 ~~l~~lH~~~~i~h~dlkp~nil~~~~~~-~kl~dfg~~~~  153 (283)
T cd06617         114 KALEYLHSKLSVIHRDVKPSNVLINRNGQ-VKLCDFGISGY  153 (283)
T ss_pred             HHHHHHhhcCCeecCCCCHHHEEECCCCC-EEEeecccccc
Confidence            789999997 9999999999999999998 99999999875

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.46  E-value=2.4e-13  Score=95.83  Aligned_cols=88  Identities=24%  Similarity=0.488  Sum_probs=66.3

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc-------cccCc------hhHHHHHHH------------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS-------ITNDT------NSILRFLLL------------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~~------~~~~~~~~~------------------------   66 (127)
                      |.+..++|++.+.||+|+||.||+|...+       .....      ..+..++..                        
T Consensus         1 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   80 (256)
T cd05039           1 WAINSKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE   80 (256)
T ss_pred             CccChhhccceeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence            34667899999999999999999998866       11110      112222222                        


Q ss_pred             hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+++                          .|+.|||.++++|+||+|.||+++.++. ++|+|||.++.
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~-~~l~d~g~~~~  151 (256)
T cd05039          81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLV-AKVSDFGLAKE  151 (256)
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCC-EEEcccccccc
Confidence            222222                          7899999999999999999999999998 99999998876

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG4278|consensus

Probab=99.46  E-value=5.6e-14  Score=109.66  Aligned_cols=93  Identities=23%  Similarity=0.414  Sum_probs=74.0

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc---------cccCch------hHHHHHHH--------------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITNDTN------SILRFLLL--------------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~~~------~~~~~~~~--------------------   66 (127)
                      ..|++...+......||-|.||.||.|.|+.         +..+..      .|..+|++                    
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY  339 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY  339 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence            5678888888889999999999999999998         111111      22222222                    


Q ss_pred             ----hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceecCc
Q psy7471          67 ----LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKI  115 (127)
Q Consensus        67 ----~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~~  115 (127)
                          ||+.|+                          .|++||..++.|||||..+|+|+..+.. +|++|||+++.+..
T Consensus       340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhi-VKvADFGLsRlMtg  417 (1157)
T KOG4278|consen  340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHI-VKVADFGLSRLMTG  417 (1157)
T ss_pred             EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccce-EEeeccchhhhhcC
Confidence                666665                          7999999999999999999999999998 99999999998443

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.46  E-value=1.7e-13  Score=97.07  Aligned_cols=39  Identities=31%  Similarity=0.517  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++++|||++..
T Consensus       117 ~~l~~LH~~~i~H~dl~~~nil~~~~~~-~~l~d~g~~~~  155 (267)
T cd08228         117 SAVEHMHSRRVMHRDIKPANVFITATGV-VKLGDLGLGRF  155 (267)
T ss_pred             HHHHHHhhCCeeCCCCCHHHEEEcCCCC-EEECcccccee
Confidence            6899999999999999999999999998 99999998876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.46  E-value=3e-13  Score=97.16  Aligned_cols=39  Identities=41%  Similarity=0.647  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       114 ~~L~~lH~~~i~H~dlkp~Nil~~~~~~-~~l~Dfg~~~~  152 (291)
T cd07870         114 RGLAYIHGQHILHRDLKPQNLLISYLGE-LKLADFGLARA  152 (291)
T ss_pred             HHHHHHHhCCcccCCCChHHEEEcCCCc-EEEeccccccc
Confidence            7899999999999999999999999998 99999998875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.46  E-value=2.9e-14  Score=101.08  Aligned_cols=39  Identities=33%  Similarity=0.462  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+|++|.||+++.+.. ++++|||++..
T Consensus       118 ~al~~lH~~~i~H~dlkp~Nili~~~~~-~kl~dfg~~~~  156 (268)
T cd05063         118 AGMKYLSDMNYVHRDLAARNILVNSNLE-CKVSDFGLSRV  156 (268)
T ss_pred             HHHHHHHHCCeeccccchhhEEEcCCCc-EEECCCcccee
Confidence            7899999999999999999999999888 99999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.45  E-value=2.2e-14  Score=102.59  Aligned_cols=39  Identities=33%  Similarity=0.468  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|+|+++++|+||||.||+++.+.. +||+|||+++.
T Consensus       135 ~aL~~lH~~gi~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~  173 (283)
T cd05091         135 AGMEFLSSHHVVHKDLATRNVLVFDKLN-VKISDLGLFRE  173 (283)
T ss_pred             HHHHHHHHcCccccccchhheEecCCCc-eEecccccccc
Confidence            7899999999999999999999999888 99999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.45  E-value=7.7e-14  Score=98.17  Aligned_cols=39  Identities=31%  Similarity=0.550  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.+||+++++|+||+|+||+++.++. ++|+|||+++.
T Consensus       113 ~~l~~lH~~~i~H~di~p~nil~~~~~~-~~l~df~~~~~  151 (257)
T cd08223         113 MALQYLHEKHILHRDLKTQNVFLTRTNI-IKVGDLGIARV  151 (257)
T ss_pred             HHHHHHHhCCeeccCCCchhEEEecCCc-EEEecccceEE
Confidence            6799999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.45  E-value=2.2e-14  Score=108.38  Aligned_cols=39  Identities=33%  Similarity=0.531  Sum_probs=36.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+||||.||+++.... ++|+|||+++.
T Consensus       250 ~aL~~LH~~~ivHrdlkp~NiLl~~~~~-~kL~DfGla~~  288 (401)
T cd05107         250 NGMEFLASKNCVHRDLAARNVLICEGKL-VKICDFGLARD  288 (401)
T ss_pred             HHHHHHhcCCcCcccCCcceEEEeCCCE-EEEEecCccee
Confidence            4788999999999999999999998888 99999999885

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.45  E-value=1.2e-13  Score=99.14  Aligned_cols=39  Identities=31%  Similarity=0.479  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.+.. ++|+|||+++.
T Consensus       141 ~al~~LH~~~i~H~dlkp~Nili~~~~~-~~l~dfg~~~~  179 (296)
T cd05051         141 SGMRYLESLNFVHRDLATRNCLVGKNYT-IKIADFGMSRN  179 (296)
T ss_pred             HHHHHHHHcCccccccchhceeecCCCc-eEEccccceee
Confidence            6899999999999999999999999988 99999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.45  E-value=3.8e-14  Score=100.67  Aligned_cols=39  Identities=31%  Similarity=0.534  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++..+. ++++|||+++.
T Consensus       118 ~~l~~lH~~~~~H~dl~p~nili~~~~~-~~l~d~g~~~~  156 (270)
T cd05056         118 TALAYLESKRFVHRDIAARNVLVSSPDC-VKLGDFGLSRY  156 (270)
T ss_pred             HHHHHHHhCCeeccccChheEEEecCCC-eEEccCceeee
Confidence            7899999999999999999999999998 99999999876

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.45  E-value=3.8e-14  Score=102.67  Aligned_cols=39  Identities=46%  Similarity=0.749  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++..+. ++++|||+++.
T Consensus       112 ~~l~~lH~~~i~H~dl~p~NIll~~~~~-~~l~dfg~~~~  150 (305)
T cd05609         112 LALEYLHNYGIVHRDLKPDNLLITSMGH-IKLTDFGLSKI  150 (305)
T ss_pred             HHHHHHHHCCccccCCchHHEEECCCCC-EEEeeCCCccc
Confidence            6899999999999999999999999998 99999998874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.44  E-value=8.3e-14  Score=107.92  Aligned_cols=39  Identities=41%  Similarity=0.707  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.|||..+++||||||.||+++.+.. ++|+|||+++.
T Consensus       320 ~aL~~lH~~~ivHrDLKp~NILl~~~~~-~kL~DFGla~~  358 (507)
T PLN03224        320 TGLRKLHRIGIVHRDIKPENLLVTVDGQ-VKIIDFGAAVD  358 (507)
T ss_pred             HHHHHHHHCCeecCCCchHhEEECCCCc-EEEEeCcCccc
Confidence            5899999999999999999999999988 99999999865

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.44  E-value=1.5e-13  Score=99.66  Aligned_cols=39  Identities=33%  Similarity=0.566  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.+.. ++++|||+++.
T Consensus       152 ~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~~l~dfg~~~~  190 (302)
T cd05055         152 KGMAFLASKNCIHRDLAARNVLLTHGKI-VKICDFGLARD  190 (302)
T ss_pred             HHHHHHHHCCeehhhhccceEEEcCCCe-EEECCCccccc
Confidence            7899999999999999999999998888 99999999885

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.44  E-value=2.2e-13  Score=98.79  Aligned_cols=39  Identities=38%  Similarity=0.535  Sum_probs=34.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEe----cCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLD----AGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~----~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||+||++.    ..+. +||+|||+++.
T Consensus       119 ~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~-~kl~DfG~a~~  161 (317)
T cd07867         119 DGIHYLHANWVLHRDLKPANILVMGEGPERGR-VKIADMGFARL  161 (317)
T ss_pred             HHHHHHHhCCEEcCCCCHHHEEEccCCCCCCc-EEEeeccceec
Confidence            789999999999999999999994    4456 99999999976

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.44  E-value=2.2e-14  Score=103.16  Aligned_cols=39  Identities=46%  Similarity=0.780  Sum_probs=36.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.|||.++++|+|++|.||+++.++. ++|+|||++..
T Consensus       121 ~~l~~lH~~~i~H~dlkp~Nili~~~~~-~kl~dfg~~~~  159 (292)
T cd06644         121 EALQYLHSMKIIHRDLKAGNVLLTLDGD-IKLADFGVSAK  159 (292)
T ss_pred             HHHHHHhcCCeeecCCCcceEEEcCCCC-EEEccCcccee
Confidence            7899999999999999999999998888 99999998765

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.44  E-value=3.7e-13  Score=96.81  Aligned_cols=39  Identities=49%  Similarity=0.872  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       112 ~~l~~lH~~~i~H~dl~p~nili~~~~~-~kl~dfg~~~~  150 (290)
T cd05580         112 LALEYLHSLDIVYRDLKPENLLLDSDGY-IKITDFGFAKR  150 (290)
T ss_pred             HHHHHHHHCCEecCCCCHHHEEECCCCC-EEEeeCCCccc
Confidence            7899999999999999999999999998 99999999886

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.44  E-value=4.1e-13  Score=95.91  Aligned_cols=39  Identities=49%  Similarity=0.765  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       110 ~al~~LH~~~i~H~dl~~~nil~~~~~~-~~l~dfg~~~~  148 (284)
T cd07839         110 KGLAFCHSHNVLHRDLKPQNLLINKNGE-LKLADFGLARA  148 (284)
T ss_pred             HHHHHHHHCCEecCCCCHHHEEEcCCCc-EEECccchhhc
Confidence            7899999999999999999999999998 99999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.44  E-value=6.3e-14  Score=100.24  Aligned_cols=39  Identities=44%  Similarity=0.636  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       135 ~~l~~lH~~~i~H~dlkp~nili~~~~~-~kl~dfg~~~~  173 (286)
T cd06638         135 MGLQHLHVNKTIHRDVKGNNILLTTEGG-VKLVDFGVSAQ  173 (286)
T ss_pred             HHHHHHHhCCccccCCCHHhEEECCCCC-EEEccCCceee
Confidence            6899999999999999999999999998 99999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.44  E-value=1.7e-13  Score=97.14  Aligned_cols=85  Identities=31%  Similarity=0.497  Sum_probs=64.7

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cccC-------chhHHHHHHH------------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITND-------TNSILRFLLL------------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~-------~~~~~~~~~~------------------------   66 (127)
                      ..++|++.+.||+|+||.||+|+++.         ....       ...+..++..                        
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e   86 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME   86 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence            45689999999999999999998754         1000       0122333322                        


Q ss_pred             hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+++                        .|+.|||+++++|+|++|.|++++.++. ++|+|||+++.
T Consensus        87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~-~~l~dfg~~~~  155 (267)
T cd06646          87 YCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGD-VKLADFGVAAK  155 (267)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCC-EEECcCcccee
Confidence            333322                        7899999999999999999999999998 99999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.44  E-value=2.2e-13  Score=96.86  Aligned_cols=39  Identities=21%  Similarity=0.227  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.|++++.++. ++++||++++.
T Consensus       128 ~~l~~LH~~~i~H~dlkp~Nili~~~~~-~~l~~~~~~~~  166 (275)
T cd05046         128 LGMDHLSNARFVHRDLAARNCLVSSQRE-VKVSLLSLSKD  166 (275)
T ss_pred             HHHHHhhhcCcccCcCccceEEEeCCCc-EEEcccccccc
Confidence            6899999999999999999999999998 99999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.44  E-value=3.8e-14  Score=102.50  Aligned_cols=39  Identities=56%  Similarity=0.921  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++. ++|+|||++..
T Consensus       126 ~~L~~LH~~~i~H~dL~p~Nili~~~~~-~~l~Dfg~~~~  164 (297)
T cd06656         126 QALDFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ  164 (297)
T ss_pred             HHHHHHHHCCcccCCCCHHHEEECCCCC-EEECcCccceE
Confidence            6899999999999999999999999998 99999998875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.43  E-value=3.9e-14  Score=100.72  Aligned_cols=39  Identities=33%  Similarity=0.504  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|+||.|++++.... ++|+|||+++.
T Consensus       111 ~al~~lH~~~i~H~dlkp~nil~~~~~~-~kL~dfg~~~~  149 (269)
T cd05087         111 LGLLHLHKNNFIHSDLALRNCLLTADLT-VKIGDYGLSHN  149 (269)
T ss_pred             HHHHHHHHCCEeccccCcceEEEcCCCc-EEECCcccccc
Confidence            6889999999999999999999999888 99999998864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.43  E-value=5.5e-13  Score=93.89  Aligned_cols=39  Identities=36%  Similarity=0.600  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++++|||+++.
T Consensus       111 ~al~~lH~~~i~H~dl~p~nili~~~~~-~~l~dfg~~~~  149 (255)
T cd08219         111 LGVQHIHEKRVLHRDIKSKNIFLTQNGK-VKLGDFGSARL  149 (255)
T ss_pred             HHHHHHhhCCcccCCCCcceEEECCCCc-EEEcccCccee
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.43  E-value=5.2e-14  Score=99.76  Aligned_cols=39  Identities=44%  Similarity=0.685  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       117 ~~l~~lH~~~i~H~dl~p~nil~~~~~~-~~l~Dfg~~~~  155 (265)
T cd06652         117 EGVSYLHSNMIVHRDIKGANILRDSVGN-VKLGDFGASKR  155 (265)
T ss_pred             HHHHHHHhCCEecCCCCHHHEEecCCCC-EEECcCccccc
Confidence            7899999999999999999999999898 99999998874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.43  E-value=2.8e-13  Score=97.36  Aligned_cols=39  Identities=31%  Similarity=0.432  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||||.||+++.++. ++|+|||+++.
T Consensus       131 ~aL~~lH~~~i~H~dlkp~Nili~~~~~-~kl~dfg~~~~  169 (288)
T cd05093         131 AGMVYLASQHFVHRDLATRNCLVGENLL-VKIGDFGMSRD  169 (288)
T ss_pred             HHHHHHHhCCeeecccCcceEEEccCCc-EEeccCCcccc
Confidence            6899999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.43  E-value=8.1e-14  Score=95.42  Aligned_cols=38  Identities=26%  Similarity=0.314  Sum_probs=35.5

Q ss_pred             HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.++|. ++++|+|+||.||+++ ++. ++|+|||++..
T Consensus       128 ~~l~~lH~~~givHrDlkP~NIll~-~~~-~~liDFG~a~~  166 (190)
T cd05145         128 EQMRRLYQEAGLVHGDLSEYNILYH-DGK-PYIIDVSQAVE  166 (190)
T ss_pred             HHHHHHHHhCCEecCCCChhhEEEE-CCC-EEEEEccccee
Confidence            78899999 9999999999999998 677 99999999987

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0596|consensus

Probab=99.43  E-value=2.7e-13  Score=104.15  Aligned_cols=38  Identities=45%  Similarity=0.670  Sum_probs=35.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.++|.+||+|.||||+|+|+. .+. +||+|||.|+.
T Consensus       471 ~aV~~IH~~gIVHSDLKPANFLlV-kG~-LKLIDFGIA~a  508 (677)
T KOG0596|consen  471 LAVKTIHQHGIVHSDLKPANFLLV-KGR-LKLIDFGIANA  508 (677)
T ss_pred             HHHHHHHHhceeecCCCcccEEEE-eee-EEeeeechhcc
Confidence            789999999999999999999998 455 99999999997

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.43  E-value=7.2e-13  Score=94.55  Aligned_cols=39  Identities=38%  Similarity=0.701  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++. ++|+|||++..
T Consensus       111 ~~l~~LH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~  149 (286)
T cd07847         111 QAVNFCHKHNCIHRDVKPENILITKQGQ-IKLCDFGFARI  149 (286)
T ss_pred             HHHHHHHHCCceecCCChhhEEEcCCCc-EEECcccccee
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.43  E-value=6e-13  Score=95.46  Aligned_cols=84  Identities=33%  Similarity=0.467  Sum_probs=65.0

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------ccc--------CchhHHHHHHH-----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITN--------DTNSILRFLLL-----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~--------~~~~~~~~~~~-----------------------   66 (127)
                      .+++|++.+.||+|+||.||+|..+.         ...        ....|+.++..                       
T Consensus         3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (291)
T cd07844           3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF   82 (291)
T ss_pred             CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence            35789999999999999999998864         100        01124444433                       


Q ss_pred             -hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+ +                         .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus        83 e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~-~kl~dfg~~~~  152 (291)
T cd07844          83 EYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE-LKLADFGLARA  152 (291)
T ss_pred             ecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCC-EEECccccccc
Confidence             2221 1                         7899999999999999999999999998 99999998865

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.43  E-value=6.3e-14  Score=100.84  Aligned_cols=39  Identities=31%  Similarity=0.441  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       134 ~al~~lH~~~i~H~dlkp~Nil~~~~~~-~~l~dfg~a~~  172 (291)
T cd05094         134 SGMVYLASQHFVHRDLATRNCLVGANLL-VKIGDFGMSRD  172 (291)
T ss_pred             HHHHHHHhCCeeecccCcceEEEccCCc-EEECCCCcccc
Confidence            6899999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.42  E-value=5.6e-14  Score=100.00  Aligned_cols=39  Identities=31%  Similarity=0.517  Sum_probs=36.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||++..
T Consensus       110 ~al~~lH~~~i~H~dikp~nil~~~~~~-~~l~Dfg~~~~  148 (268)
T cd05086         110 AGVTHMHKHNFLHSDLALRNCFLTSDLT-VKVGDYGIGPS  148 (268)
T ss_pred             HHHHHHHHCCeeccCCccceEEEcCCcc-EEecccccccc
Confidence            6899999999999999999999999988 99999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0669|consensus

Probab=99.42  E-value=8.9e-15  Score=103.64  Aligned_cols=39  Identities=41%  Similarity=0.704  Sum_probs=37.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|+|++.|+|||+||+|+|++.++. ++|+|||+++.
T Consensus       135 ~GL~~iHr~kilHRDmKaaNvLIt~dgi-lklADFGlar~  173 (376)
T KOG0669|consen  135 NGLYYIHRNKILHRDMKAANVLITKDGI-LKLADFGLARA  173 (376)
T ss_pred             HHHHHHHHhhHHhhcccHhhEEEcCCce-EEeeccccccc
Confidence            7899999999999999999999999999 99999999976

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.42  E-value=2.8e-14  Score=102.40  Aligned_cols=39  Identities=44%  Similarity=0.679  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++++|||++..
T Consensus       108 ~al~~lH~~~ivH~dikp~Nil~~~~~~-~~l~dfg~~~~  146 (279)
T cd05633         108 LGLEHMHNRFVVYRDLKPANILLDEHGH-VRISDLGLACD  146 (279)
T ss_pred             HHHHHHHHCCcCCCCCCHHHEEECCCCC-EEEccCCccee
Confidence            7899999999999999999999999998 99999999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.42  E-value=4.3e-14  Score=99.42  Aligned_cols=39  Identities=31%  Similarity=0.500  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       105 ~~L~~lH~~~i~H~dl~p~nil~~~~~~-~kl~dfg~~~~  143 (252)
T cd05084         105 AGMEYLESKHCIHRDLAARNCLVTEKNV-LKISDFGMSRE  143 (252)
T ss_pred             HHHHHHHhCCccccccchheEEEcCCCc-EEECccccCcc
Confidence            7899999999999999999999999988 99999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG2052|consensus

Probab=99.42  E-value=3.5e-13  Score=101.23  Aligned_cols=87  Identities=26%  Similarity=0.402  Sum_probs=65.4

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc-------cccC----chhHHHHHHH----------------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS-------ITND----TNSILRFLLL----------------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~----~~~~~~~~~~----------------------------   66 (127)
                      -...+..+.+.||+|.||+||+|+|++       +...    +.+|.+|+.-                            
T Consensus       208 TiarqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLv  287 (513)
T KOG2052|consen  208 TIARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLV  287 (513)
T ss_pred             hhhheeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEe
Confidence            345678999999999999999999998       1111    1133333222                            


Q ss_pred             --hhcchh-----------------------HHHHHHHHC--------CcEecCCCCCCEEEecCCCeEEEEecccceec
Q psy7471          67 --LLCAGD-----------------------ACLTFLHRH--------GVVYRDLKLDNILLDAGGSLLKLADFGRCARK  113 (127)
Q Consensus        67 --~~~~g~-----------------------~al~~lH~~--------~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~  113 (127)
                        |=+.|+                       .||.+||..        .|.|||||..|||+..++. +-|+|+|+|-.+
T Consensus       288 TdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~-C~IADLGLAv~h  366 (513)
T KOG2052|consen  288 TDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT-CCIADLGLAVRH  366 (513)
T ss_pred             eecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc-EEEeeceeeEEe
Confidence              222232                       789999963        5999999999999999999 999999998873

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.42  E-value=6e-14  Score=101.41  Aligned_cols=39  Identities=56%  Similarity=0.920  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+||+|.||+++.++. ++|+|||++..
T Consensus       127 ~aL~~LH~~gi~H~dLkp~Nill~~~~~-~kl~dfg~~~~  165 (296)
T cd06654         127 QALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ  165 (296)
T ss_pred             HHHHHHHHCCcccCCCCHHHEEEcCCCC-EEECccccchh
Confidence            7899999999999999999999999998 99999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.41  E-value=5.1e-13  Score=94.25  Aligned_cols=39  Identities=44%  Similarity=0.704  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+||+|.||+++.++. ++|+|||+++.
T Consensus       115 ~~l~~lH~~~i~H~dl~p~nilv~~~~~-~~l~dfg~~~~  153 (263)
T cd06625         115 EGVEYLHSNMIVHRDIKGANILRDSAGN-VKLGDFGASKR  153 (263)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEeeccccee
Confidence            6899999999999999999999999888 99999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.41  E-value=9.1e-15  Score=103.64  Aligned_cols=39  Identities=49%  Similarity=0.721  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++..+. ++|+|||++..
T Consensus       117 ~~l~~lH~~~i~H~dlkp~nili~~~~~-~~l~dfg~~~~  155 (267)
T cd06645         117 QGLYYLHSKGKMHRDIKGANILLTDNGH-VKLADFGVSAQ  155 (267)
T ss_pred             HHHHHHHHCCeecCCCCHHHEEECCCCC-EEECcceeeeE
Confidence            7899999999999999999999999998 99999999865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG1026|consensus

Probab=99.41  E-value=1.2e-13  Score=109.56  Aligned_cols=92  Identities=27%  Similarity=0.384  Sum_probs=74.0

Q ss_pred             CCCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------------c--------ccCchhHHHHHHH-----------
Q psy7471          20 SGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------------I--------TNDTNSILRFLLL-----------   66 (127)
Q Consensus        20 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~--------~~~~~~~~~~~~~-----------   66 (127)
                      .....++...+.++.+.||+|+||+||+|+..+              .        ..+.+.|.+++.+           
T Consensus       477 ~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlG  556 (774)
T KOG1026|consen  477 DLKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLG  556 (774)
T ss_pred             ccceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence            334456788899999999999999999998876              0        0111244444444           


Q ss_pred             -------------hhcchh--------------------------------------HHHHHHHHCCcEecCCCCCCEEE
Q psy7471          67 -------------LLCAGD--------------------------------------ACLTFLHRHGVVYRDLKLDNILL   95 (127)
Q Consensus        67 -------------~~~~g~--------------------------------------~al~~lH~~~iih~dlk~~nil~   95 (127)
                                   |+..||                                      .|+.||.++..+||||..+|+|+
T Consensus       557 VC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV  636 (774)
T KOG1026|consen  557 VCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV  636 (774)
T ss_pred             EEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee
Confidence                         666665                                      68999999999999999999999


Q ss_pred             ecCCCeEEEEeccccee
Q psy7471          96 DAGGSLLKLADFGRCAR  112 (127)
Q Consensus        96 ~~~~~~~kl~dfg~a~~  112 (127)
                      ..+.. |||+|||++|.
T Consensus       637 ge~l~-VKIsDfGLsRd  652 (774)
T KOG1026|consen  637 GENLV-VKISDFGLSRD  652 (774)
T ss_pred             ccceE-EEecccccchh
Confidence            99998 99999999998

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.41  E-value=8.4e-13  Score=93.24  Aligned_cols=39  Identities=31%  Similarity=0.533  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++. ++++|||+++.
T Consensus       117 ~~l~~lh~~~i~h~dl~p~nil~~~~~~-~~l~d~~~~~~  155 (267)
T cd08224         117 SALEHMHSKRIMHRDIKPANVFITATGV-VKLGDLGLGRF  155 (267)
T ss_pred             HHHHHHHhCCEecCCcChhhEEECCCCc-EEEeccceeee
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.41  E-value=3.4e-13  Score=92.57  Aligned_cols=38  Identities=24%  Similarity=0.348  Sum_probs=34.1

Q ss_pred             HHHHHH-HHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFL-HRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~l-H~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.++ |..+++|||+||.||+++ ++. ++|+|||+|..
T Consensus       128 ~~L~~l~H~~giiHrDlkP~NIli~-~~~-v~LiDFG~a~~  166 (190)
T cd05147         128 QIMRILYQDCRLVHADLSEYNLLYH-DGK-LYIIDVSQSVE  166 (190)
T ss_pred             HHHHHHHHhCCcccCCCCHHHEEEE-CCc-EEEEEcccccc
Confidence            678898 699999999999999998 466 99999999875

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.41  E-value=4.1e-14  Score=101.30  Aligned_cols=39  Identities=38%  Similarity=0.731  Sum_probs=35.8

Q ss_pred             HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||. .+++|+||+|.||+++.++. ++|+|||++..
T Consensus       113 ~~l~~LH~~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~  152 (286)
T cd06622         113 KGLKFLKEEHNIIHRDVKPTNVLVNGNGQ-VKLCDFGVSGN  152 (286)
T ss_pred             HHHHHHHhcCCEeeCCCCHHHEEECCCCC-EEEeecCCccc
Confidence            68999997 59999999999999999888 99999998865

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.41  E-value=6.8e-13  Score=95.24  Aligned_cols=39  Identities=49%  Similarity=0.905  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++. ++|+|||+++.
T Consensus       116 ~al~~lH~~~i~H~dl~p~nil~~~~~~-~kl~dfg~~~~  154 (290)
T cd05613         116 LALEHLHKLGIIYRDIKLENILLDSNGH-VVLTDFGLSKE  154 (290)
T ss_pred             HHHHHHHhCCeeccCCCHHHeEECCCCC-EEEeeCcccee
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.41  E-value=3.2e-13  Score=97.01  Aligned_cols=39  Identities=31%  Similarity=0.550  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       138 ~~l~~LH~~~ivH~dikp~nill~~~~~-~kl~dfg~~~~  176 (290)
T cd05045         138 RGMQYLAEMKLVHRDLAARNVLVAEGRK-MKISDFGLSRD  176 (290)
T ss_pred             HHHHHHHHCCeehhhhhhheEEEcCCCc-EEecccccccc
Confidence            6799999999999999999999999888 99999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.40  E-value=7.9e-13  Score=93.07  Aligned_cols=85  Identities=22%  Similarity=0.407  Sum_probs=63.8

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc--------ccc------CchhHHHHHHH------------------------hh
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS--------ITN------DTNSILRFLLL------------------------LL   68 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~------~~~~~~~~~~~------------------------~~   68 (127)
                      ..++|++.+.||+|+||.||++.+..        ...      ....+..++..                        |+
T Consensus         2 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd05112           2 HPSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM   81 (256)
T ss_pred             ChhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence            45689999999999999999998763        000      01123333332                        22


Q ss_pred             cchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          69 CAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        69 ~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+++                         .|+.|||+++++|+|++|.|++++.++. ++|+|||+++.
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~-~~l~d~g~~~~  149 (256)
T cd05112          82 EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQV-VKVSDFGMTRF  149 (256)
T ss_pred             CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCe-EEECCCcceee
Confidence            2221                         6789999999999999999999998888 99999998875

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.40  E-value=1.1e-12  Score=95.08  Aligned_cols=85  Identities=28%  Similarity=0.493  Sum_probs=65.5

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cc--c-------CchhHHHHHHH----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------IT--N-------DTNSILRFLLL----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--~-------~~~~~~~~~~~----------------------   66 (127)
                      ++++|++.+.||+|+||.||+|.++.         ..  .       ....|+.++..                      
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence            57899999999999999999998864         10  0       01134444433                      


Q ss_pred             ----hhcch--h----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----LLCAG--D----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----~~~~g--~----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                          |+.+.  +                      .|+.|||+.+++|+||+|.||+++..+. ++|+|||++..
T Consensus        85 lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~-~kL~dfg~~~~  157 (309)
T cd07845          85 LVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGC-LKIADFGLART  157 (309)
T ss_pred             EEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC-EEECccceeee
Confidence                22110  0                      7899999999999999999999999998 99999999886

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.40  E-value=1.1e-12  Score=93.68  Aligned_cols=39  Identities=38%  Similarity=0.699  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+|++|.||+++.++. ++|+|||++..
T Consensus       111 ~~l~~LH~~~i~h~~l~p~ni~~~~~~~-~~l~dfg~~~~  149 (286)
T cd07846         111 RGIEFCHSHNIIHRDIKPENILVSQSGV-VKLCDFGFART  149 (286)
T ss_pred             HHHHHHHHCCccccCCCHHHEEECCCCc-EEEEeeeeeee
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.40  E-value=3.2e-14  Score=101.00  Aligned_cols=39  Identities=44%  Similarity=0.691  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.++. ++|+|||++..
T Consensus       122 ~~l~~LH~~~ivh~dl~~~nili~~~~~-~~l~Dfg~~~~  160 (272)
T cd06637         122 RGLSHLHQHKVIHRDIKGQNVLLTENAE-VKLVDFGVSAQ  160 (272)
T ss_pred             HHHHHHHHCCCccCCCCHHHEEECCCCC-EEEccCCCcee
Confidence            7899999999999999999999999998 99999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.40  E-value=1.4e-13  Score=96.68  Aligned_cols=39  Identities=33%  Similarity=0.486  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       112 ~al~~lH~~~i~h~dl~~~nili~~~~~-~~l~df~~~~~  150 (256)
T cd08529         112 LGLAHLHSKKILHRDIKSLNLFLDAYDN-VKIGDLGVAKL  150 (256)
T ss_pred             HHHHHHHHCCcccCCCCcceEEEeCCCC-EEEccccccee
Confidence            7899999999999999999999999998 99999998876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.40  E-value=8.8e-14  Score=98.23  Aligned_cols=39  Identities=33%  Similarity=0.484  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.+.. ++|+|||+++.
T Consensus       109 ~~l~~lH~~~i~H~dlk~~nili~~~~~-~kl~dfg~~~~  147 (262)
T cd05058         109 KGMEYLASKKFVHRDLAARNCMLDESFT-VKVADFGLARD  147 (262)
T ss_pred             HHHHHHHhCCccccccCcceEEEcCCCc-EEECCcccccc
Confidence            7899999999999999999999999998 99999999874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=1.1e-13  Score=100.55  Aligned_cols=39  Identities=46%  Similarity=0.790  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+||||.||+++.++. ++|+|||++..
T Consensus       114 ~~l~~lH~~~i~H~dlkp~Nili~~~~~-~~l~dfg~~~~  152 (316)
T cd05574         114 LALEYLHLLGIVYRDLKPENILLHESGH-IMLSDFDLSKQ  152 (316)
T ss_pred             HHHHHHHHCCeeccCCChHHeEEcCCCC-EEEeecchhhc
Confidence            7899999999999999999999999998 99999998875

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.40  E-value=7.3e-13  Score=94.56  Aligned_cols=39  Identities=23%  Similarity=0.470  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.+.. ++++|||+++.
T Consensus       128 ~~l~~LH~~~i~H~di~p~nil~~~~~~-~kl~d~g~~~~  166 (280)
T cd05043         128 CGMSYLHKRGVIHKDIAARNCVIDEELQ-VKITDNALSRD  166 (280)
T ss_pred             HHHHHHHHCCEeecccCHhhEEEcCCCc-EEECCCCCccc
Confidence            7899999999999999999999998888 99999999875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.40  E-value=9.6e-13  Score=93.97  Aligned_cols=39  Identities=44%  Similarity=0.671  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       112 ~~L~~lH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~  150 (285)
T cd07861         112 QGILFCHSRRVLHRDLKPQNLLIDNKGV-IKLADFGLARA  150 (285)
T ss_pred             HHHHHHHhCCeeecCCCHHHEEEcCCCc-EEECcccceee
Confidence            7899999999999999999999999998 99999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG1094|consensus

Probab=99.40  E-value=2.7e-13  Score=104.89  Aligned_cols=88  Identities=25%  Similarity=0.394  Sum_probs=73.0

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc----------------ccc------------------------CchhHHHH
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS----------------ITN------------------------DTNSILRF   63 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~----------------~~~------------------------~~~~~~~~   63 (127)
                      .+++.+.+.+.+.||+|.||.|.+|.-..                ...                        -.+..+.+
T Consensus       533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm  612 (807)
T KOG1094|consen  533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM  612 (807)
T ss_pred             hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence            46777889999999999999999997755                000                        01234556


Q ss_pred             HHHhhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          64 LLLLLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        64 ~~~~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +++|++.|+                          .|+.||.+.+++|||+.+.|+|++.+.. +||+|||+++-
T Consensus       613 I~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~-iKiadfgmsR~  686 (807)
T KOG1094|consen  613 ITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFT-IKIADFGMSRN  686 (807)
T ss_pred             HHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCccc-EEecCcccccc
Confidence            666888887                          7899999999999999999999999999 99999999984

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=1.3e-12  Score=92.00  Aligned_cols=39  Identities=49%  Similarity=0.757  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||++..
T Consensus       112 ~~l~~lh~~~i~h~dl~p~ni~i~~~~~-~~l~d~g~~~~  150 (262)
T cd06613         112 KGLAYLHETGKIHRDIKGANILLTEDGD-VKLADFGVSAQ  150 (262)
T ss_pred             HHHHHHHhCCceecCCChhhEEECCCCC-EEECccccchh
Confidence            7899999999999999999999999999 99999998765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.39  E-value=5.8e-13  Score=95.35  Aligned_cols=39  Identities=31%  Similarity=0.455  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.+.. ++|+|||++..
T Consensus       133 ~al~~LH~~~i~H~dlkp~nil~~~~~~-~kL~dfg~~~~  171 (280)
T cd05092         133 SGMVYLASLHFVHRDLATRNCLVGQGLV-VKIGDFGMSRD  171 (280)
T ss_pred             HHHHHHHHCCeecccccHhhEEEcCCCC-EEECCCCceeE
Confidence            6899999999999999999999999888 99999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.39  E-value=1.4e-12  Score=95.88  Aligned_cols=39  Identities=38%  Similarity=0.624  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       117 ~aL~~LH~~~ivH~dlkp~Nill~~~~~-~kl~dfg~~~~  155 (336)
T cd07849         117 RGLKYIHSANVLHRDLKPSNLLLNTNCD-LKICDFGLARI  155 (336)
T ss_pred             HHHHHHHhCCeeccCCCHHHEEECCCCC-EEECcccceee
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.39  E-value=5e-13  Score=94.86  Aligned_cols=39  Identities=26%  Similarity=0.478  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.+.. ++++|||+++.
T Consensus       124 ~~l~~lH~~~i~H~dikp~nili~~~~~-~kl~dfg~~~~  162 (273)
T cd05074         124 SGMEYLSSKNFIHRDLAARNCMLNENMT-VCVADFGLSKK  162 (273)
T ss_pred             HHHHHHHhCCEeecccchhhEEEcCCCC-EEECccccccc
Confidence            6899999999999999999999998888 99999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG4717|consensus

Probab=99.38  E-value=1.6e-14  Score=110.52  Aligned_cols=50  Identities=36%  Similarity=0.563  Sum_probs=43.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEe-cCCCeEEEEeccccee----cCcccceeeEE
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLD-AGGSLLKLADFGRCAR----KKIKLFCDLLI  123 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~-~~~~~~kl~dfg~a~~----~~~~~~~gt~~  123 (127)
                      .|+.|||...++||||||+|+.+. ..+. +||+|||++..    .+..++||+|.
T Consensus       129 ~AI~YCHqLHVVHRDLKPENVVFFEKlGl-VKLTDFGFSNkf~PG~kL~TsCGSLA  183 (864)
T KOG4717|consen  129 HAISYCHQLHVVHRDLKPENVVFFEKLGL-VKLTDFGFSNKFQPGKKLTTSCGSLA  183 (864)
T ss_pred             HHHHHHhhhhhhcccCCcceeEEeeecCc-eEeeeccccccCCCcchhhcccchhh
Confidence            789999999999999999999865 4577 99999999987    55689999885

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.38  E-value=3e-13  Score=95.72  Aligned_cols=39  Identities=33%  Similarity=0.536  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++++|||++..
T Consensus       117 ~~l~~LH~~~i~H~dl~p~nili~~~~~-~~l~dfg~~~~  155 (267)
T cd08229         117 SALEHMHSRRVMHRDIKPANVFITATGV-VKLGDLGLGRF  155 (267)
T ss_pred             HHHHHHHHCCeecCCCCHHHEEEcCCCC-EEECcchhhhc
Confidence            7899999999999999999999999998 99999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.38  E-value=8.9e-14  Score=99.37  Aligned_cols=39  Identities=44%  Similarity=0.665  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.++. ++|+|||++..
T Consensus       132 ~al~~LH~~~ivH~dl~~~nili~~~~~-~~l~dfg~~~~  170 (282)
T cd06636         132 RGLAHLHAHKVIHRDIKGQNVLLTENAE-VKLVDFGVSAQ  170 (282)
T ss_pred             HHHHHHHHCCcccCCCCHHHEEECCCCC-EEEeeCcchhh
Confidence            7899999999999999999999999998 99999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=1.2e-13  Score=97.91  Aligned_cols=39  Identities=44%  Similarity=0.715  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       117 ~al~~LH~~~i~H~dl~p~ni~i~~~~~-~~l~dfg~~~~  155 (264)
T cd06653         117 QGVSYLHSNMIVHRDIKGANILRDSAGN-VKLGDFGASKR  155 (264)
T ss_pred             HHHHHHHhCCEecCCCCHHHEEEcCCCC-EEECccccccc
Confidence            7899999999999999999999999888 99999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.38  E-value=1e-13  Score=97.97  Aligned_cols=39  Identities=31%  Similarity=0.449  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.+.. ++|+|||+++.
T Consensus       106 ~al~~lH~~~i~H~dlkp~nill~~~~~-~kl~Dfg~~~~  144 (257)
T cd05116         106 MGMKYLEETNFVHRDLAARNVLLVTQHY-AKISDFGLSKA  144 (257)
T ss_pred             HHHHHHHHCCEeecccchhhEEEcCCCe-EEECCCccccc
Confidence            7899999999999999999999999888 99999999876

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.38  E-value=1.9e-12  Score=92.41  Aligned_cols=40  Identities=30%  Similarity=0.492  Sum_probs=35.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC--CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG--SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~--~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|+||+++..+  ..++|+|||+++.
T Consensus       127 ~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~  168 (277)
T cd05036         127 KGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARD  168 (277)
T ss_pred             HHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccc
Confidence            678999999999999999999998654  1289999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.38  E-value=3.1e-13  Score=97.05  Aligned_cols=39  Identities=44%  Similarity=0.679  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       139 ~al~~lH~~~ivH~dlkp~nili~~~~~-~kl~dfg~~~~  177 (291)
T cd06639         139 LGLQHLHNNRIIHRDVKGNNILLTTEGG-VKLVDFGVSAQ  177 (291)
T ss_pred             HHHHHHHhCCeeccCCCHHHEEEcCCCC-EEEeecccchh
Confidence            6899999999999999999999999998 99999998875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.37  E-value=5.6e-13  Score=95.33  Aligned_cols=39  Identities=46%  Similarity=0.801  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++. ++++|||++..
T Consensus       114 ~~L~~LH~~~i~H~dlkp~nili~~~~~-~kl~dfg~~~~  152 (282)
T cd06643         114 EALNYLHENKIIHRDLKAGNILFTLDGD-IKLADFGVSAK  152 (282)
T ss_pred             HHHHHHHHCCeeecCCCcccEEEccCCC-EEEcccccccc
Confidence            7899999999999999999999999998 99999999865

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.37  E-value=2.2e-12  Score=92.08  Aligned_cols=39  Identities=38%  Similarity=0.731  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+|++|.||+++.++. ++|+|||++..
T Consensus       111 ~~l~~LH~~~i~H~dl~~~ni~~~~~~~-~kl~d~g~~~~  149 (288)
T cd07833         111 QAIAYCHSHNIIHRDIKPENILVSESGV-LKLCDFGFARA  149 (288)
T ss_pred             HHHHHHHHCCeecCCCCHHHeEECCCCC-EEEEeeecccc
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.37  E-value=9.7e-14  Score=99.44  Aligned_cols=39  Identities=44%  Similarity=0.679  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+|++|.||+++.++. ++|+|||++..
T Consensus       108 ~~l~~lH~~~i~H~di~p~nili~~~~~-~kl~dfg~~~~  146 (278)
T cd05606         108 LGLEHMHNRFVVYRDLKPANILLDEHGH-VRISDLGLACD  146 (278)
T ss_pred             HHHHHHHHCCEEcCCCCHHHEEECCCCC-EEEccCcCccc
Confidence            6899999999999999999999999988 99999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=4.4e-14  Score=100.84  Aligned_cols=39  Identities=56%  Similarity=0.865  Sum_probs=36.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.++. ++|+|||++..
T Consensus       114 ~~l~~lh~~~i~h~dl~p~nili~~~~~-~~l~d~g~~~~  152 (280)
T cd06611         114 EALNFLHSHKVIHRDLKAGNILLTLDGD-VKLADFGVSAK  152 (280)
T ss_pred             HHHHHHHHCCcccCCCChhhEEECCCCC-EEEccCccchh
Confidence            7899999999999999999999999998 99999998764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.37  E-value=2.8e-12  Score=92.04  Aligned_cols=39  Identities=44%  Similarity=0.668  Sum_probs=36.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec-CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA-GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~-~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++. ++. ++|+|||+++.
T Consensus       121 ~~L~~LH~~~i~H~dl~~~nil~~~~~~~-~kl~dfg~~~~  160 (295)
T cd07837         121 KGVAHCHKHGVMHRDLKPQNLLVDKQKGL-LKIADLGLGRA  160 (295)
T ss_pred             HHHHHHHHCCeeecCCChHHEEEecCCCe-EEEeeccccee
Confidence            7899999999999999999999998 666 99999998875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.37  E-value=4.3e-13  Score=95.54  Aligned_cols=39  Identities=28%  Similarity=0.409  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       133 ~~l~~lH~~~i~h~dlkp~nili~~~~~-~kl~d~g~~~~  171 (280)
T cd05049         133 SGMVYLASQHFVHRDLATRNCLVGYDLV-VKIGDFGMSRD  171 (280)
T ss_pred             HHHHHHhhCCeeccccccceEEEcCCCe-EEECCccccee
Confidence            6789999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.37  E-value=2.1e-12  Score=93.18  Aligned_cols=39  Identities=41%  Similarity=0.714  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       126 ~al~~lH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~  164 (311)
T cd07866         126 EGINYLHENHILHRDIKAANILIDNQGI-LKIADFGLARP  164 (311)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEECCCCC-EEECcCccchh
Confidence            7899999999999999999999999999 99999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.37  E-value=2.1e-13  Score=97.10  Aligned_cols=39  Identities=28%  Similarity=0.489  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+|++|.||+++.++. ++|+|||++..
T Consensus       120 ~aL~~lH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~  158 (284)
T cd05038         120 KGMDYLGSQRYIHRDLAARNILVESEDL-VKISDFGLAKV  158 (284)
T ss_pred             HHHHHHHhCCeecCCCCHHhEEEcCCCC-EEEcccccccc
Confidence            7899999999999999999999999988 99999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1025|consensus

Probab=99.37  E-value=6.3e-13  Score=106.09  Aligned_cols=91  Identities=27%  Similarity=0.386  Sum_probs=70.0

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc------------ccc---------------------C-----------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS------------ITN---------------------D-----------   56 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~~---------------------~-----------   56 (127)
                      ..........++..++||.|+||.||+|.|..            ...                     +           
T Consensus       688 ~~lrI~kEtelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc  767 (1177)
T KOG1025|consen  688 ALLRILKETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVC  767 (1177)
T ss_pred             hheeechhhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhc
Confidence            33344455567889999999999999999865            000                     0           


Q ss_pred             chhHHHHHHHhhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccce
Q psy7471          57 TNSILRFLLLLLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA  111 (127)
Q Consensus        57 ~~~~~~~~~~~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~  111 (127)
                      ......++.+|+..|.                         .|+.|||.++++||||..+|+|+..... +|+.|||+++
T Consensus       768 ~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~h-vkitdfgla~  846 (1177)
T KOG1025|consen  768 MLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNH-VKITDFGLAK  846 (1177)
T ss_pred             ccchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCe-EEEEecchhh
Confidence            0022344555676665                         7899999999999999999999999998 9999999988


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      -
T Consensus       847 l  847 (1177)
T KOG1025|consen  847 L  847 (1177)
T ss_pred             c
Confidence            6

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.37  E-value=1.7e-13  Score=98.32  Aligned_cols=39  Identities=33%  Similarity=0.479  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       141 ~aL~~lH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~  179 (288)
T cd05050         141 AGMAYLSERKFVHRDLATRNCLVGENMV-VKIADFGLSRN  179 (288)
T ss_pred             HHHHHHHhCCeecccccHhheEecCCCc-eEECcccccee
Confidence            6789999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG0199|consensus

Probab=99.36  E-value=1e-13  Score=108.99  Aligned_cols=87  Identities=26%  Similarity=0.433  Sum_probs=68.1

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc------------cc--------cCch-----------------------hHH
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS------------IT--------NDTN-----------------------SIL   61 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~--------~~~~-----------------------~~~   61 (127)
                      -|..++.++.+.||+|+||+|++|.|..            ..        .+..                       ..+
T Consensus       106 lIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~  185 (1039)
T KOG0199|consen  106 LIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPA  185 (1039)
T ss_pred             eccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchh
Confidence            3566788899999999999999999987            00        0001                       222


Q ss_pred             HHHHHhhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          62 RFLLLLLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        62 ~~~~~~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+++|.+..|+                          .|+.||..+++|||||..+|+++..... +||+|||+.+.
T Consensus       186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprt-VKI~DFGLmRa  261 (1039)
T KOG0199|consen  186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRT-VKICDFGLMRA  261 (1039)
T ss_pred             hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccce-eeeecccceec
Confidence            33344555555                          7899999999999999999999999888 99999999886

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.36  E-value=4.8e-12  Score=91.01  Aligned_cols=40  Identities=43%  Similarity=0.646  Sum_probs=35.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++..+..+||+|||++..
T Consensus       113 ~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~  152 (294)
T PLN00009        113 RGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARA  152 (294)
T ss_pred             HHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccc
Confidence            7899999999999999999999986543389999999875

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.36  E-value=1.1e-12  Score=93.12  Aligned_cols=39  Identities=44%  Similarity=0.726  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.+.. ++|+|||+++.
T Consensus       117 ~~l~~LH~~~i~H~~l~p~nil~~~~~~-~~l~dfg~~~~  155 (266)
T cd06651         117 EGMSYLHSNMIVHRDIKGANILRDSAGN-VKLGDFGASKR  155 (266)
T ss_pred             HHHHHHHhCCeeeCCCCHHHEEECCCCC-EEEccCCCccc
Confidence            7899999999999999999999999888 99999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.36  E-value=2.3e-13  Score=95.69  Aligned_cols=39  Identities=28%  Similarity=0.325  Sum_probs=36.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC-------CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG-------SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~-------~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.+.       . ++++|||++..
T Consensus       112 ~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~-~kl~Dfg~a~~  157 (259)
T cd05037         112 SALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPF-IKLSDPGIPIT  157 (259)
T ss_pred             HHHHHHhhCCeecccCccceEEEecCccccCCcee-EEeCCCCcccc
Confidence            789999999999999999999999877       5 99999999886

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.36  E-value=2.2e-12  Score=94.72  Aligned_cols=39  Identities=33%  Similarity=0.618  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       118 ~aL~~LH~~~ivH~dlkp~Nil~~~~~~-~kl~dfg~~~~  156 (334)
T cd07855         118 RGLKYIHSANVIHRDLKPSNLLVNEDCE-LRIGDFGMARG  156 (334)
T ss_pred             HHHHHHHHCCeecCCCCHHHEEEcCCCc-EEeccccccee
Confidence            7899999999999999999999999999 99999999876

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.36  E-value=1.9e-12  Score=94.96  Aligned_cols=39  Identities=38%  Similarity=0.634  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       116 ~aL~~LH~~givH~dlkp~Nili~~~~~-~kl~Dfg~a~~  154 (332)
T cd07857         116 CGLKYIHSANVLHRDLKPGNLLVNADCE-LKICDFGLARG  154 (332)
T ss_pred             HHHHHHHhCCcccCCCCHHHeEEcCCCC-EEeCcCCCcee
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.36  E-value=2.4e-12  Score=90.59  Aligned_cols=39  Identities=36%  Similarity=0.703  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.|||+.+++|+||+|.||+++.++. +||+|||++..
T Consensus       112 ~~l~~lh~~~i~h~dl~p~ni~~~~~~~-~kl~d~~~~~~  150 (256)
T cd08221         112 SAVSYIHKAGILHRDIKTLNIFLTKAGL-IKLGDFGISKI  150 (256)
T ss_pred             HHHHHHHhCCccccCCChHhEEEeCCCC-EEECcCcceEE
Confidence            6899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.36  E-value=2.9e-12  Score=92.19  Aligned_cols=39  Identities=44%  Similarity=0.700  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       113 ~al~~lH~~~i~H~dl~p~nill~~~~~-~~l~dfg~~~~  151 (298)
T cd07841         113 RGLEYLHSNWILHRDLKPNNLLIASDGV-LKLADFGLARS  151 (298)
T ss_pred             HHHHHHHhCCeeecCCChhhEEEcCCCC-EEEccceeeee
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.35  E-value=2.8e-13  Score=95.57  Aligned_cols=39  Identities=49%  Similarity=0.782  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++. ++|+|||++..
T Consensus       113 ~al~~lh~~~i~h~~l~p~ni~~~~~~~-~~l~df~~~~~  151 (267)
T cd06610         113 KGLEYLHSNGQIHRDIKAGNILLGEDGS-VKIADFGVSAS  151 (267)
T ss_pred             HHHHHHHhCCeecCCCCHHhEEEcCCCC-EEEcccchHHH
Confidence            7899999999999999999999999988 99999998765

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.35  E-value=2.2e-12  Score=92.02  Aligned_cols=39  Identities=41%  Similarity=0.733  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++..+. ++++|||++..
T Consensus       110 ~~l~~lH~~~i~H~dl~p~ni~~~~~~~-~~l~dfg~~~~  148 (286)
T cd07832         110 KGVAYMHANGIMHRDLKPANLLISADGV-LKIADFGLARL  148 (286)
T ss_pred             HHHHHHHHCCeecCCcCHHHEEEcCCCc-EEEeeeeeccc
Confidence            7899999999999999999999999888 99999998876

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.35  E-value=1.4e-13  Score=97.45  Aligned_cols=40  Identities=28%  Similarity=0.339  Sum_probs=35.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCe-------EEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSL-------LKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~-------~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++..       ++++|||++..
T Consensus       111 ~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078         111 WALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             HHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            78999999999999999999999876541       69999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.35  E-value=1.6e-12  Score=92.15  Aligned_cols=39  Identities=31%  Similarity=0.437  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||||.||+++.+.. ++|+|||+++.
T Consensus       106 ~~l~~lH~~~i~H~dlkp~nil~~~~~~-~kl~dfg~~~~  144 (257)
T cd05115         106 MGMKYLEGKNFVHRDLAARNVLLVNQHY-AKISDFGLSKA  144 (257)
T ss_pred             HHHHHHHhcCeeecccchheEEEcCCCc-EEeccCCcccc
Confidence            7899999999999999999999999988 99999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.35  E-value=2.7e-12  Score=90.52  Aligned_cols=39  Identities=41%  Similarity=0.789  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||++..
T Consensus       111 ~~l~~lh~~~i~h~dl~~~nil~~~~~~-~~l~d~~~~~~  149 (258)
T cd05578         111 LALEYLHSKGIIHRDIKPDNILLDEQGH-VHITDFNIATK  149 (258)
T ss_pred             HHHHHHHhCCeeccCCCHHHeEEcCCCC-EEEeecccccc
Confidence            7899999999999999999999999999 99999998775

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.35  E-value=3.3e-12  Score=94.50  Aligned_cols=39  Identities=36%  Similarity=0.623  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||||.||+++.++. ++|+|||+++.
T Consensus       129 ~aL~~LH~~gi~H~dlkp~Nil~~~~~~-~kL~Dfg~~~~  167 (353)
T cd07850         129 CGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFGLART  167 (353)
T ss_pred             HHHHHHHhCCeeeCCCCHHHEEECCCCC-EEEccCcccee
Confidence            6899999999999999999999999998 99999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0603|consensus

Probab=99.35  E-value=5e-13  Score=103.58  Aligned_cols=86  Identities=35%  Similarity=0.574  Sum_probs=65.6

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cc----------------------------cCchhHHHHHHHhhc
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------IT----------------------------NDTNSILRFLLLLLC   69 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~----------------------------~~~~~~~~~~~~~~~   69 (127)
                      ..++|.+...+|.|+|++|..|.+..         +.                            .....+.+++++.+.
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~  399 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLD  399 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhcc
Confidence            46789999999999999999998876         00                            011123333333444


Q ss_pred             chh-----------------------HHHHHHHHCCcEecCCCCCCEEEe-cCCCeEEEEecccceec
Q psy7471          70 AGD-----------------------ACLTFLHRHGVVYRDLKLDNILLD-AGGSLLKLADFGRCARK  113 (127)
Q Consensus        70 ~g~-----------------------~al~~lH~~~iih~dlk~~nil~~-~~~~~~kl~dfg~a~~~  113 (127)
                      ++.                       .|+.|||+++++||||||.|||++ ..+. ++|+|||.++..
T Consensus       400 g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~-lrltyFG~a~~~  466 (612)
T KOG0603|consen  400 GGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGH-LRLTYFGFWSEL  466 (612)
T ss_pred             ccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCc-EEEEEechhhhC
Confidence            433                       789999999999999999999994 7777 999999999873

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.35  E-value=2.6e-12  Score=89.40  Aligned_cols=39  Identities=41%  Similarity=0.509  Sum_probs=36.5

Q ss_pred             HHHHHHHHCCcEecCC-CCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDL-KLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dl-k~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.++|++||+|||| ||.||+++.++. ++|+|||++..
T Consensus       102 ~~L~~lH~~GIvHrDL~kp~NILv~~~g~-i~LIDFG~A~~  141 (218)
T PRK12274        102 RLLQQLHRCGVAHNDLAKEANWLVQEDGS-PAVIDFQLAVR  141 (218)
T ss_pred             HHHHHHHHCcCccCCCCCcceEEEcCCCC-EEEEECCCcee
Confidence            6889999999999999 799999998888 99999999986

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.34  E-value=1.5e-12  Score=92.21  Aligned_cols=39  Identities=41%  Similarity=0.672  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++. ++|+|||++..
T Consensus       113 ~~l~~lH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~  151 (265)
T cd06631         113 DGVAYLHNNCVVHRDIKGNNVMLMPNGI-IKLIDFGCARR  151 (265)
T ss_pred             HHHHHHHhCCcccCCcCHHhEEECCCCe-EEeccchhhHh
Confidence            7899999999999999999999999998 99999998764

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.34  E-value=3.2e-13  Score=97.24  Aligned_cols=39  Identities=41%  Similarity=0.680  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++. ++|+|||++..
T Consensus       127 ~aL~~LH~~~i~H~dl~p~nili~~~~~-~kl~dfg~~~~  165 (302)
T cd07864         127 EGLNYCHKKNFLHRDIKCSNILLNNKGQ-IKLADFGLARL  165 (302)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEECCCCc-EEeCccccccc
Confidence            7899999999999999999999999998 99999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.34  E-value=4.5e-12  Score=91.38  Aligned_cols=39  Identities=44%  Similarity=0.711  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       130 ~al~~lH~~~i~H~dl~p~nil~~~~~~-~kl~dfg~~~~  168 (310)
T cd07865         130 NGLYYIHRNKILHRDMKAANILITKDGI-LKLADFGLARA  168 (310)
T ss_pred             HHHHHHHHCCeeccCCCHHHEEECCCCc-EEECcCCCccc
Confidence            7899999999999999999999999998 99999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.34  E-value=3.8e-12  Score=91.26  Aligned_cols=39  Identities=49%  Similarity=0.885  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.|||..+++|+||+|.||+++.++. ++++|||+++.
T Consensus       116 ~~l~~lH~~~~~H~dl~p~nil~~~~~~-~~l~dfg~~~~  154 (288)
T cd05583         116 LALDHLHQLGIIYRDIKLENILLDSEGH-VVLTDFGLSKE  154 (288)
T ss_pred             HHHHHHHHCCeeccCCCHHHeEECCCCC-EEEEECccccc
Confidence            7899999999999999999999999988 99999998875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.33  E-value=6.7e-13  Score=94.28  Aligned_cols=39  Identities=46%  Similarity=0.819  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++++|||+++.
T Consensus       119 ~~l~~lH~~~i~H~dl~~~nil~~~~~~-~~l~d~~~~~~  157 (272)
T cd06629         119 EGLAYLHSKGILHRDLKADNLLVDADGI-CKISDFGISKK  157 (272)
T ss_pred             HHHHHHhhCCeeecCCChhhEEEcCCCe-EEEeecccccc
Confidence            7899999999999999999999999988 99999998875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.33  E-value=3.4e-12  Score=92.35  Aligned_cols=39  Identities=54%  Similarity=0.909  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       126 ~al~~LH~~~i~H~dL~p~Nili~~~~~-~kl~dfg~~~~  164 (296)
T cd06655         126 QALEFLHANQVIHRDIKSDNVLLGMDGS-VKLTDFGFCAQ  164 (296)
T ss_pred             HHHHHHHHCCcccCCCCHHHEEECCCCC-EEEccCccchh
Confidence            6899999999999999999999999898 99999998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0576|consensus

Probab=99.33  E-value=1.1e-13  Score=108.09  Aligned_cols=96  Identities=29%  Similarity=0.450  Sum_probs=74.3

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc-------------------cccC------c---------------hhHHHHHH
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS-------------------ITND------T---------------NSILRFLL   65 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------------~~~~------~---------------~~~~~~~~   65 (127)
                      -+.++|.+..++|.|+||.||+++++.                   ..++      +               ...++|.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            567899999999999999999999986                   0000      0               02223334


Q ss_pred             Hhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee-----cCcc
Q psy7471          66 LLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIK  116 (127)
Q Consensus        66 ~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~-----~~~~  116 (127)
                      +||.+|+                        .++.|||+.+-+|||+|-.||++.+.+. +|++|||.+..     .+..
T Consensus        92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gD-vklaDfgvsaqitati~Krk  170 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGD-VKLADFGVSAQITATIAKRK  170 (829)
T ss_pred             EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCc-eeecccCchhhhhhhhhhhh
Confidence            4777766                        6899999999999999999999999999 99999998776     3345


Q ss_pred             cceeeE
Q psy7471         117 LFCDLL  122 (127)
Q Consensus       117 ~~~gt~  122 (127)
                      .|.||.
T Consensus       171 sfiGtp  176 (829)
T KOG0576|consen  171 SFIGTP  176 (829)
T ss_pred             cccCCc
Confidence            566653

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.33  E-value=3.5e-13  Score=96.12  Aligned_cols=39  Identities=36%  Similarity=0.715  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC-CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG-SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~-~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++ . ++++|||+++.
T Consensus       120 ~~l~~lH~~~i~H~dl~p~nil~~~~~~~-~~l~dfg~~~~  159 (267)
T PHA03390        120 EALNDLHKHNIIHNDIKLENVLYDRAKDR-IYLCDYGLCKI  159 (267)
T ss_pred             HHHHHHHhCCeeeCCCCHHHEEEeCCCCe-EEEecCcccee
Confidence            789999999999999999999999988 6 99999999876

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.33  E-value=2.7e-13  Score=97.48  Aligned_cols=39  Identities=38%  Similarity=0.633  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|+||+++.++. ++|+|||+++.
T Consensus       117 ~aL~~LH~~~i~H~dl~p~nili~~~~~-~~l~d~g~~~~  155 (293)
T cd07843         117 SGVAHLHDNWILHRDLKTSNLLLNNRGI-LKICDFGLARE  155 (293)
T ss_pred             HHHHHHHHCCeeeccCCHHHEEECCCCc-EEEeecCceee
Confidence            7899999999999999999999999998 99999998876

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.33  E-value=6.2e-13  Score=93.49  Aligned_cols=39  Identities=44%  Similarity=0.548  Sum_probs=36.8

Q ss_pred             HHHHHHH-----HCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLH-----RHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH-----~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||     ..+++|+||+|.||+++.++. ++++|||++..
T Consensus       116 ~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~-~kl~d~g~~~~  159 (265)
T cd08217         116 LALYECHNRSDPGNTVLHRDLKPANIFLDANNN-VKLGDFGLAKI  159 (265)
T ss_pred             HHHHHHhcCccccCcceecCCCHHHEEEecCCC-EEEeccccccc
Confidence            6899999     889999999999999999998 99999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG2345|consensus

Probab=99.33  E-value=6.8e-12  Score=88.56  Aligned_cols=39  Identities=36%  Similarity=0.468  Sum_probs=36.3

Q ss_pred             HHHHHHHHCC--cEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHG--VVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~--iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.+||+..  ..|||+||.||++.+.+. +.+.|||.+..
T Consensus       138 ~gL~~lH~~~~~yAH~DiKP~NILls~~~~-~vl~D~GS~~~  178 (302)
T KOG2345|consen  138 RGLEALHEKEPPYAHRDIKPANILLSDSGL-PVLMDLGSATQ  178 (302)
T ss_pred             HHHHHHhccCCcccccCCCcceeEecCCCc-eEEEeccCccc
Confidence            7899999997  999999999999999898 99999998765

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.33  E-value=2.3e-12  Score=90.35  Aligned_cols=39  Identities=31%  Similarity=0.544  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|+|.++++|+|++|.||+++.+.. ++|+|||++..
T Consensus       104 ~~l~~lH~~~~~H~dl~p~nili~~~~~-~~l~d~g~~~~  142 (250)
T cd05085         104 AGMAYLESKNCIHRDLAARNCLVGENNV-LKISDFGMSRQ  142 (250)
T ss_pred             HHHHHHHhCCeeecccChheEEEcCCCe-EEECCCcccee
Confidence            6899999999999999999999999888 99999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.33  E-value=7.5e-12  Score=92.44  Aligned_cols=39  Identities=31%  Similarity=0.568  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       131 ~aL~~LH~~~ivH~dlkp~NIll~~~~~-~kl~dfg~~~~  169 (345)
T cd07877         131 RGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARH  169 (345)
T ss_pred             HHHHHHHHCCeeecCCChHHEEEcCCCC-EEEeccccccc
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.33  E-value=1.3e-11  Score=87.59  Aligned_cols=40  Identities=38%  Similarity=0.679  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK  113 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~  113 (127)
                      .|+.|||+++++|++|++.||+++.+.. +||+|||+++..
T Consensus       114 ~~l~~Lh~~~iiH~~l~~~nill~~~~~-~Kl~~f~~~~~~  153 (259)
T PF07714_consen  114 EALSYLHSNNIIHGNLSPSNILLDSNGQ-VKLSDFGLSRPI  153 (259)
T ss_dssp             HHHHHHHHTTEEEST-SGGGEEEETTTE-EEEESTTTGEET
T ss_pred             cccccccccccccccccccccccccccc-cccccccccccc
Confidence            7899999999999999999999999998 999999998874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.33  E-value=4e-13  Score=94.35  Aligned_cols=39  Identities=46%  Similarity=0.709  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++. ++|+|||++..
T Consensus       113 ~~l~~lH~~~i~H~dl~~~ni~~~~~~~-~kl~d~~~~~~  151 (258)
T cd06632         113 LGLEYLHDRNTVHRDIKGANILVDTNGV-VKLADFGMAKQ  151 (258)
T ss_pred             HHHHHHHHCCcccCCCCHHHEEECCCCC-EEEccCcccee
Confidence            7899999999999999999999999998 99999998875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.33  E-value=1.9e-12  Score=91.67  Aligned_cols=39  Identities=41%  Similarity=0.782  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       117 ~~l~~lH~~~ivH~di~p~nil~~~~~~-~~l~dfg~~~~  155 (267)
T cd06628         117 KGLNYLHNRGIIHRDIKGANILVDNKGG-IKISDFGISKK  155 (267)
T ss_pred             HHHHHHHhcCcccccCCHHHEEEcCCCC-EEecccCCCcc
Confidence            7899999999999999999999999998 99999998876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.32  E-value=5.8e-13  Score=94.55  Aligned_cols=39  Identities=44%  Similarity=0.755  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.++. ++++|||++..
T Consensus       113 ~~l~~Lh~~~~~H~dl~~~ni~i~~~~~-~~l~df~~~~~  151 (280)
T cd05581         113 LALEYLHSKGIIHRDLKPENILLDKDMH-IKITDFGTAKV  151 (280)
T ss_pred             HHHHHHHHCCeeecCCCHHHeEECCCCC-EEecCCccccc
Confidence            7899999999999999999999999998 99999998875

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.32  E-value=2.8e-12  Score=90.49  Aligned_cols=39  Identities=31%  Similarity=0.453  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.|++++.++. ++|+|||+++.
T Consensus       106 ~~l~~lh~~~i~H~di~p~nili~~~~~-~kl~df~~~~~  144 (257)
T cd05060         106 MGMAYLESKHFVHRDLAARNVLLVNRHQ-AKISDFGMSRA  144 (257)
T ss_pred             HHHHHHhhcCeeccCcccceEEEcCCCc-EEeccccccce
Confidence            7899999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG3653|consensus

Probab=99.32  E-value=1.5e-12  Score=98.41  Aligned_cols=86  Identities=24%  Similarity=0.396  Sum_probs=64.6

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc-----------cccCchhHHHHHHH----------------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS-----------ITNDTNSILRFLLL----------------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~-----------~~~~~~~~~~~~~~----------------------------   66 (127)
                      ......++..++|+|.||.||+|...+           .......|..|+..                            
T Consensus       207 ~~l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV  286 (534)
T KOG3653|consen  207 LELDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV  286 (534)
T ss_pred             ccCCchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence            346778899999999999999998877           11111233333322                            


Q ss_pred             --hhcchh-----------------------HHHHHHHHC---------CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --LLCAGD-----------------------ACLTFLHRH---------GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~-----------------------~al~~lH~~---------~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                        |-..|+                       .|++|||..         .|+|||+|..|||+..+.. +-|+|||+|..
T Consensus       287 t~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlT-ccIaDFGLAl~  365 (534)
T KOG3653|consen  287 TEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLT-CCIADFGLALR  365 (534)
T ss_pred             eeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCc-EEeeccceeEE
Confidence              111222                       789999972         6999999999999999999 99999999987

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.32  E-value=2.8e-13  Score=96.98  Aligned_cols=40  Identities=30%  Similarity=0.426  Sum_probs=34.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCC------eEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGS------LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~------~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++..+.      .++++|||++..
T Consensus       128 ~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~  173 (274)
T cd05076         128 SALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFT  173 (274)
T ss_pred             HHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccc
Confidence            7899999999999999999999975431      279999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.32  E-value=6.5e-13  Score=95.88  Aligned_cols=39  Identities=56%  Similarity=0.920  Sum_probs=36.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.|++++.++. ++|+|||++..
T Consensus       126 ~al~~LH~~gi~H~dL~p~Nili~~~~~-~kL~dfg~~~~  164 (293)
T cd06647         126 QALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ  164 (293)
T ss_pred             HHHHHHHhCCEeeccCCHHHEEEcCCCC-EEEccCcceec
Confidence            6899999999999999999999999888 99999998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.32  E-value=8e-13  Score=94.14  Aligned_cols=38  Identities=47%  Similarity=0.845  Sum_probs=35.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++. +. ++|+|||+++.
T Consensus       111 ~~L~~LH~~~i~H~dl~p~ni~l~~-~~-~kl~dfg~~~~  148 (282)
T cd07831         111 KSLDHMHRNGIFHRDIKPENILIKD-DI-LKLADFGSCRG  148 (282)
T ss_pred             HHHHHHHHCCceecccCHHHEEEcC-CC-eEEEecccccc
Confidence            7899999999999999999999999 87 99999999876

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.32  E-value=9e-13  Score=94.66  Aligned_cols=39  Identities=41%  Similarity=0.708  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+|++|.||+++.+.. ++|+|||++..
T Consensus       116 ~~L~~lH~~~i~H~dl~~~nil~~~~~~-~~l~dfg~~~~  154 (287)
T cd06621         116 KGLSYLHSRKIIHRDIKPSNILLTRKGQ-VKLCDFGVSGE  154 (287)
T ss_pred             HHHHHHHHCCcccCCCCHHHEEEecCCe-EEEeecccccc
Confidence            6899999999999999999999999998 99999999775

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.32  E-value=4.2e-12  Score=89.51  Aligned_cols=39  Identities=49%  Similarity=0.861  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++..+. ++|+|||++..
T Consensus       110 ~~l~~lh~~~i~H~dl~~~nil~~~~~~-~kl~d~g~~~~  148 (264)
T cd06626         110 EGLAYLHSHGIVHRDIKPANIFLDHNGV-IKLGDFGCAVK  148 (264)
T ss_pred             HHHHHHHHCCcccCCCCHHHEEECCCCC-EEEcccccccc
Confidence            7899999999999999999999999998 99999998876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.32  E-value=3.7e-13  Score=105.04  Aligned_cols=38  Identities=32%  Similarity=0.471  Sum_probs=34.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.+||+.+++|+|+||.||++ .++. ++|+|||+++.
T Consensus       439 ~~L~~lH~~giiHrDlkp~NILl-~~~~-~~liDFGla~~  476 (535)
T PRK09605        439 EIVAKLHKAGIVHGDLTTSNFIV-RDDR-LYLIDFGLGKY  476 (535)
T ss_pred             HHHHHHHhCCCccCCCChHHEEE-ECCc-EEEEeCccccc
Confidence            67899999999999999999999 4666 99999999986

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.31  E-value=3e-12  Score=91.14  Aligned_cols=39  Identities=31%  Similarity=0.459  Sum_probs=36.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.|++++.+.. ++++|||+++.
T Consensus       123 ~al~~lH~~~i~H~dikp~nili~~~~~-~kl~dfgl~~~  161 (270)
T cd05047         123 RGMDYLSQKQFIHRDLAARNILVGENYV-AKIADFGLSRG  161 (270)
T ss_pred             HHHHHHHHCCEeecccccceEEEcCCCe-EEECCCCCccc
Confidence            6899999999999999999999999988 99999999863

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.31  E-value=1.7e-12  Score=94.15  Aligned_cols=39  Identities=46%  Similarity=0.743  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+||+|.||+++.++. ++|+|||++..
T Consensus       126 ~~L~~LH~~~i~H~dl~p~nIl~~~~~~-~kL~dfg~~~~  164 (307)
T cd06607         126 QGLAYLHSHERIHRDIKAGNILLTEPGT-VKLADFGSASL  164 (307)
T ss_pred             HHHHHHHHCCceecCCCcccEEECCCCC-EEEeecCccee
Confidence            7899999999999999999999999998 99999998875

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.31  E-value=7.8e-13  Score=92.74  Aligned_cols=39  Identities=26%  Similarity=0.434  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+|++|.||+++.++. ++++|||+++.
T Consensus       114 ~~l~~lh~~~~~h~dl~~~nil~~~~~~-~~l~dfg~~~~  152 (258)
T smart00219      114 RGMEYLESKNFIHRDLAARNCLVGENLV-VKISDFGLSRD  152 (258)
T ss_pred             HHHHHHhcCCeeecccccceEEEccCCe-EEEcccCCcee
Confidence            6899999999999999999999999998 99999999876

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.31  E-value=1.1e-12  Score=92.42  Aligned_cols=39  Identities=36%  Similarity=0.625  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.+.. ++++|||++..
T Consensus       112 ~~l~~lh~~~i~h~~l~~~nil~~~~~~-~~l~d~~~~~~  150 (256)
T cd08218         112 LALKHVHDRKILHRDIKSQNIFLTKDGT-IKLGDFGIARV  150 (256)
T ss_pred             HHHHHHHhCCEecCCCCHHHEEEcCCCC-EEEeeccceee
Confidence            7899999999999999999999999998 99999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.31  E-value=7.1e-12  Score=89.53  Aligned_cols=39  Identities=46%  Similarity=0.750  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+|++|.||+++.++. ++|+|||+++.
T Consensus       111 ~~l~~lh~~~i~H~~l~p~nill~~~~~-~~l~dfg~~~~  149 (284)
T cd07860         111 QGLAFCHSHRVLHRDLKPQNLLINTEGA-IKLADFGLARA  149 (284)
T ss_pred             HHHHHHHHCCeecCCCCHHHEEECCCCC-EEEeeccchhh
Confidence            7899999999999999999999999998 99999998765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.31  E-value=8.6e-12  Score=92.06  Aligned_cols=39  Identities=33%  Similarity=0.626  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++. ++++|||++..
T Consensus       129 ~al~~LH~~gi~H~dlkp~Nill~~~~~-~kl~dfg~~~~  167 (343)
T cd07880         129 KGLKYIHAAGIIHRDLKPGNLAVNEDCE-LKILDFGLARQ  167 (343)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEeecccccc
Confidence            7899999999999999999999999998 99999999875

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.31  E-value=8.2e-13  Score=95.57  Aligned_cols=39  Identities=36%  Similarity=0.523  Sum_probs=36.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec----CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA----GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~----~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.    ++. +||+|||+++.
T Consensus       119 ~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~-~kl~Dfg~~~~  161 (316)
T cd07842         119 NGVHYLHSNWVLHRDLKPANILVMGEGPERGV-VKIGDLGLARL  161 (316)
T ss_pred             HHHHHHHhCCEeeCCCCHHHEEEcCCCCccce-EEECCCccccc
Confidence            7899999999999999999999998    777 99999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=4e-13  Score=94.87  Aligned_cols=39  Identities=41%  Similarity=0.713  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+||+|.||+++.++. ++|+|||+++.
T Consensus       108 ~aL~~lH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~  146 (260)
T cd05611         108 LGVEDLHQRGIIHRDIKPENLLIDQTGH-LKLTDFGLSRN  146 (260)
T ss_pred             HHHHHHHHCCeecCCCCHHHeEECCCCc-EEEeeccccee
Confidence            7899999999999999999999999988 99999998875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.30  E-value=7.3e-12  Score=87.93  Aligned_cols=40  Identities=38%  Similarity=0.543  Sum_probs=35.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.|||+++++|+|++|.||+++.....++++|||++..
T Consensus       112 ~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~  151 (256)
T cd08220         112 LALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKI  151 (256)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCcee
Confidence            7899999999999999999999986654389999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.30  E-value=7.1e-12  Score=88.93  Aligned_cols=39  Identities=41%  Similarity=0.769  Sum_probs=35.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec-CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA-GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~-~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++. .+. ++|+|||++..
T Consensus       119 ~al~~lH~~~i~h~dl~p~nil~~~~~~~-~~l~dfg~~~~  158 (268)
T cd06624         119 EGLKYLHDNQIVHRDIKGDNVLVNTYSGV-VKISDFGTSKR  158 (268)
T ss_pred             HHHHHHHHCCEeecCCCHHHEEEcCCCCe-EEEecchhhee
Confidence            6899999999999999999999986 456 99999998765

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG1164|consensus

Probab=99.30  E-value=9.4e-12  Score=91.54  Aligned_cols=39  Identities=33%  Similarity=0.528  Sum_probs=35.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC----CeEEEEecccce
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG----SLLKLADFGRCA  111 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~----~~~kl~dfg~a~  111 (127)
                      .+|+++|+.|++||||||.|+.+....    ..+.+.|||+++
T Consensus       133 ~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  133 NALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             HHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            789999999999999999999998653    338999999999

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.30  E-value=4.8e-12  Score=90.39  Aligned_cols=39  Identities=41%  Similarity=0.683  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+|++|.||+++.++. ++++|||+++.
T Consensus       112 ~~l~~lh~~~i~h~dl~p~Ni~i~~~~~-~~l~dfg~~~~  150 (277)
T cd06641         112 KGLDYLHSEKKIHRDIKAANVLLSEHGE-VKLADFGVAGQ  150 (277)
T ss_pred             HHHHHHccCCeecCCCCHHhEEECCCCC-EEEeeccccee
Confidence            6789999999999999999999999998 99999998875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.29  E-value=5e-12  Score=89.41  Aligned_cols=40  Identities=43%  Similarity=0.768  Sum_probs=36.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++..++|+|||++..
T Consensus       114 ~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~  153 (268)
T cd06630         114 RGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAAR  153 (268)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence            7899999999999999999999987654389999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.29  E-value=1.1e-12  Score=93.90  Aligned_cols=85  Identities=29%  Similarity=0.418  Sum_probs=63.9

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cc--cCc------hhHHHHHHH-----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------IT--NDT------NSILRFLLL-----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--~~~------~~~~~~~~~-----------------------   66 (127)
                      ..++|++.+.||+|+||+||++.+..         ..  ...      ..|+.++..                       
T Consensus         3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (284)
T cd06620           3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM   82 (284)
T ss_pred             cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence            45789999999999999999999864         00  001      123333332                       


Q ss_pred             -hhcchh------------------------HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+++                        .|+.|||+ .+++|+|++|.||+++.++. ++|+|||++..
T Consensus        83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~-~~l~d~gl~~~  153 (284)
T cd06620          83 EFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQ-IKLCDFGVSGE  153 (284)
T ss_pred             ecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCc-EEEccCCcccc
Confidence             333332                        67999997 58999999999999999888 99999998765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0607|consensus

Probab=99.29  E-value=6.6e-13  Score=96.81  Aligned_cols=40  Identities=38%  Similarity=0.620  Sum_probs=35.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCC--eEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGS--LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~--~~kl~dfg~a~~  112 (127)
                      .|+.|||.++|.||||||+|||....+.  .+|||||.+..-
T Consensus       187 ~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  187 SALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             HHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence            7899999999999999999999876554  489999998765

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.29  E-value=3.6e-13  Score=97.24  Aligned_cols=39  Identities=51%  Similarity=0.965  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       129 ~~l~~LH~~~ivH~dlkp~Nill~~~~~-~kL~dfg~~~~  167 (292)
T cd06658         129 RALSYLHNQGVIHRDIKSDSILLTSDGR-IKLSDFGFCAQ  167 (292)
T ss_pred             HHHHHHHHCCEeecCCCHHHEEEcCCCC-EEEccCcchhh
Confidence            6899999999999999999999999988 99999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.29  E-value=9.1e-13  Score=93.66  Aligned_cols=40  Identities=30%  Similarity=0.438  Sum_probs=34.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCC------eEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGS------LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~------~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||.||+++.++.      .++++|||++..
T Consensus       116 ~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~  161 (262)
T cd05077         116 SALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPIT  161 (262)
T ss_pred             HHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCcc
Confidence            7899999999999999999999986542      279999998865

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.29  E-value=1.7e-12  Score=92.55  Aligned_cols=39  Identities=38%  Similarity=0.667  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       110 ~~l~~Lh~~~i~H~dl~~~ni~i~~~~~-~~l~d~~~~~~  148 (283)
T cd07830         110 QGLAHIHKHGFFHRDLKPENLLVSGPEV-VKIADFGLARE  148 (283)
T ss_pred             HHHHHHHHCCcccCCCChhhEEEcCCCC-EEEeeccccee
Confidence            7899999999999999999999999999 99999999876

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.28  E-value=1.1e-11  Score=91.07  Aligned_cols=39  Identities=41%  Similarity=0.658  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       119 ~aL~~LH~~~i~H~dlkp~Nil~~~~~~-~kL~Dfg~~~~  157 (337)
T cd07858         119 RGLKYIHSANVLHRDLKPSNLLLNANCD-LKICDFGLART  157 (337)
T ss_pred             HHHHHHHhCCEecCCCCHHHEEEcCCCC-EEECcCccccc
Confidence            7899999999999999999999999998 99999999886

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.28  E-value=1.2e-11  Score=86.46  Aligned_cols=39  Identities=46%  Similarity=0.779  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.++. ++|+|||++..
T Consensus       110 ~~l~~lH~~~i~H~dl~p~ni~i~~~~~-~~l~d~~~~~~  148 (254)
T cd06627         110 QGLAYLHEQGVIHRDIKAANILTTKDGV-VKLADFGVATK  148 (254)
T ss_pred             HHHHHHhhCCcccCCCCHHHEEECCCCC-EEEecccccee
Confidence            7899999999999999999999999888 99999998886

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.28  E-value=6e-12  Score=88.35  Aligned_cols=39  Identities=44%  Similarity=0.691  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+|++|.||+++.++. ++|+|||++..
T Consensus       110 ~~l~~lh~~~i~H~dl~~~ni~~~~~~~-~~l~dfg~~~~  148 (256)
T cd06612         110 KGLEYLHSNKKIHRDIKAGNILLNEEGQ-AKLADFGVSGQ  148 (256)
T ss_pred             HHHHHHHHCCcccCCCCcceEEECCCCc-EEEcccccchh
Confidence            6899999999999999999999999998 99999998876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.28  E-value=1.6e-11  Score=90.50  Aligned_cols=39  Identities=33%  Similarity=0.629  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       128 ~aL~~LH~~~i~H~dlkp~NIll~~~~~-~kL~dfg~~~~  166 (342)
T cd07879         128 CGLKYIHSAGIIHRDLKPGNLAVNEDCE-LKILDFGLARH  166 (342)
T ss_pred             HHHHHHHHCCcccCCCCHHHEEECCCCC-EEEeeCCCCcC
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG1167|consensus

Probab=99.27  E-value=9.7e-13  Score=97.88  Aligned_cols=85  Identities=27%  Similarity=0.355  Sum_probs=63.9

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc-----------------cccCchhHHHHHHHh-----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS-----------------ITNDTNSILRFLLLL-----------------------   67 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~-----------------~~~~~~~~~~~~~~~-----------------------   67 (127)
                      ...|++...||+|+|++||.+....                 .......|++++...                       
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl  114 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL  114 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence            4568999999999999999997654                 111222455554441                       


Q ss_pred             -----------------------hcchhHHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          68 -----------------------LCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        68 -----------------------~~~g~~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                                             +..--.||.++|.+||+|||+||.|++......+-.|+|||+|..
T Consensus       115 p~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~  182 (418)
T KOG1167|consen  115 PYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR  182 (418)
T ss_pred             cccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHH
Confidence                                   000007899999999999999999999998766589999999984

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.27  E-value=3.7e-13  Score=96.04  Aligned_cols=39  Identities=41%  Similarity=0.690  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++++|||+++.
T Consensus       112 ~~l~~lH~~~ivH~dl~p~ni~i~~~~~-~~l~dfg~~~~  150 (277)
T cd06642         112 KGLDYLHSERKIHRDIKAANVLLSEQGD-VKLADFGVAGQ  150 (277)
T ss_pred             HHHHHHhcCCeeccCCChheEEEeCCCC-EEEcccccccc
Confidence            7899999999999999999999999998 99999999875

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.27  E-value=1.5e-11  Score=88.73  Aligned_cols=90  Identities=32%  Similarity=0.555  Sum_probs=65.6

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc---------ccc--Cch------hHHHHHHH------------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN--DTN------SILRFLLL------------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~--~~~------~~~~~~~~------------------   66 (127)
                      ..+.+..++|++.+.||+|+||.||+|.++.         +..  ...      .+..++..                  
T Consensus         8 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~   87 (296)
T cd06618           8 QKYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS   87 (296)
T ss_pred             eeccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC
Confidence            3456778999999999999999999999974         100  001      11111111                  


Q ss_pred             -------hhcch--h----------------------HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAG--D----------------------ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g--~----------------------~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+.+.  +                      .|+.|||+ .+++|+||+|.||+++.++. ++|+|||++..
T Consensus        88 ~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~-~kL~dfg~~~~  164 (296)
T cd06618          88 DVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGN-VKLCDFGISGR  164 (296)
T ss_pred             eEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCC-EEECccccchh
Confidence                   11110  0                      68999997 59999999999999999888 99999998864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.27  E-value=4.8e-13  Score=96.80  Aligned_cols=39  Identities=51%  Similarity=0.919  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       128 ~~L~~LH~~~ivH~dl~p~Nill~~~~~-~kL~dfg~~~~  166 (297)
T cd06659         128 QALCYLHSQGVIHRDIKSDSILLTLDGR-VKLSDFGFCAQ  166 (297)
T ss_pred             HHHHHHHhCCeecCCCCHHHeEEccCCc-EEEeechhHhh
Confidence            7899999999999999999999999999 99999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.27  E-value=3.7e-12  Score=89.30  Aligned_cols=39  Identities=38%  Similarity=0.489  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+|++|.||+++.++. ++++|||++..
T Consensus       114 ~al~~lh~~~i~h~~l~~~ni~~~~~~~-~kl~d~g~~~~  152 (256)
T cd08530         114 RGLQALHEQKILHRDLKSANILLVANDL-VKIGDLGISKV  152 (256)
T ss_pred             HHHHHHhhCCcccCCCCcceEEEecCCc-EEEeeccchhh
Confidence            6899999999999999999999999888 99999998765

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.27  E-value=4.6e-12  Score=90.16  Aligned_cols=39  Identities=46%  Similarity=0.758  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+|++|.|++++.++. ++++|||+++.
T Consensus       109 ~~l~~lh~~~i~h~dl~p~ni~i~~~~~-~~l~d~g~~~~  147 (274)
T cd06609         109 LGLEYLHEEGKIHRDIKAANILLSEEGD-VKLADFGVSGQ  147 (274)
T ss_pred             HHHHHHHhCCcccCCCCHHHEEECCCCC-EEEccccccee
Confidence            7899999999999999999999999999 99999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.26  E-value=5.3e-12  Score=90.14  Aligned_cols=39  Identities=41%  Similarity=0.689  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++++|||++..
T Consensus       112 ~~l~~lh~~~ivH~dl~p~Nil~~~~~~-~~l~dfg~~~~  150 (277)
T cd06640         112 KGLDYLHSEKKIHRDIKAANVLLSEQGD-VKLADFGVAGQ  150 (277)
T ss_pred             HHHHHHHhCCccCcCCChhhEEEcCCCC-EEEccccccee
Confidence            6799999999999999999999999998 99999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=7.2e-12  Score=89.18  Aligned_cols=39  Identities=44%  Similarity=0.772  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+||+|.||+++..+. ++++|||++..
T Consensus       112 ~~l~~lh~~~i~H~dl~p~ni~i~~~~~-~~l~dfg~~~~  150 (277)
T cd06917         112 VALKYIHKVGVIHRDIKAANILVTNTGN-VKLCDFGVAAL  150 (277)
T ss_pred             HHHHHHHhCCcccCCcCHHHEEEcCCCC-EEEccCCceee
Confidence            7899999999999999999999999998 99999998876

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.26  E-value=1e-11  Score=87.15  Aligned_cols=39  Identities=31%  Similarity=0.529  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.++. ++|+|||+++.
T Consensus       104 ~~l~~lH~~~i~h~di~p~nili~~~~~-~~l~d~g~~~~  142 (251)
T cd05041         104 AGMEYLESKNCIHRDLAARNCLVGENNV-LKISDFGMSRE  142 (251)
T ss_pred             HHHHHHHhCCEehhhcCcceEEEcCCCc-EEEeecccccc
Confidence            6799999999999999999999999998 99999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=1.2e-11  Score=87.50  Aligned_cols=39  Identities=44%  Similarity=0.681  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       124 ~al~~lH~~~i~H~~l~p~ni~~~~~~~-~~l~d~~~~~~  162 (275)
T cd06608         124 RGLAYLHENKVIHRDIKGQNILLTKNAE-VKLVDFGVSAQ  162 (275)
T ss_pred             HHHHHHhcCCcccCCCCHHHEEEccCCe-EEECCCcccee
Confidence            7899999999999999999999999988 99999998865

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.26  E-value=2.1e-11  Score=87.02  Aligned_cols=39  Identities=44%  Similarity=0.695  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+|++|.||+++.++. ++++|||++..
T Consensus       111 ~~l~~lH~~~i~h~dl~p~ni~~~~~~~-~~l~d~g~~~~  149 (284)
T cd07836         111 KGIAFCHENRVLHRDLKPQNLLINKRGE-LKLADFGLARA  149 (284)
T ss_pred             HHHHHHHHCCeeeCCCCHHHEEECCCCc-EEEeecchhhh
Confidence            7899999999999999999999999998 99999998864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.25  E-value=2.3e-12  Score=90.98  Aligned_cols=38  Identities=34%  Similarity=0.600  Sum_probs=34.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.|++++. +. ++++|||+++.
T Consensus       117 ~~l~~lH~~~i~h~~l~~~nili~~-~~-~~l~d~g~~~~  154 (260)
T cd08222         117 LGVHYMHQRRILHRDLKAKNIFLKN-NL-LKIGDFGVSRL  154 (260)
T ss_pred             HHHHHHHHcCccccCCChhheEeec-CC-EeecccCceee
Confidence            6899999999999999999999974 56 99999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.25  E-value=1.9e-11  Score=85.84  Aligned_cols=40  Identities=35%  Similarity=0.591  Sum_probs=35.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.++..++++|||.+..
T Consensus       112 ~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~  151 (257)
T cd08225         112 LGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQ  151 (257)
T ss_pred             HHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchh
Confidence            7899999999999999999999998765379999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.25  E-value=8.1e-12  Score=91.46  Aligned_cols=37  Identities=27%  Similarity=0.512  Sum_probs=34.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccc
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC  110 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a  110 (127)
                      .|+.|||+++++|+||||.||+++.++. ++++||+..
T Consensus       112 ~~L~~LH~~~iiH~dlkp~Nil~~~~~~-~~l~~~~~~  148 (327)
T cd08227         112 KALDYIHHMGYVHRSVKASHILISVDGK-VYLSGLRSN  148 (327)
T ss_pred             HHHHHHHHCCEecCCCChhhEEEecCCc-EEEcccchh
Confidence            7899999999999999999999999988 999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.25  E-value=2e-12  Score=90.59  Aligned_cols=39  Identities=28%  Similarity=0.413  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||.+..
T Consensus       116 ~al~~lH~~~i~H~di~p~nili~~~~~-~~l~dfg~~~~  154 (262)
T cd00192         116 KGMEYLASKKFVHRDLAARNCLVGEDLV-VKISDFGLSRD  154 (262)
T ss_pred             HHHHHHHcCCcccCccCcceEEECCCCc-EEEcccccccc
Confidence            7899999999999999999999999998 99999999886

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.24  E-value=4.3e-12  Score=90.38  Aligned_cols=39  Identities=46%  Similarity=0.767  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+||+|.||+++.++. ++++|||++..
T Consensus       111 ~al~~LH~~~~~h~dl~p~nil~~~~~~-~~l~d~g~~~~  149 (287)
T cd07840         111 EGLQYLHSNGILHRDIKGSNILINNDGV-LKLADFGLARP  149 (287)
T ss_pred             HHHHHHHHCCceeccCcHHHeEEcCCCC-EEEccccceee
Confidence            7899999999999999999999999999 99999999886

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.24  E-value=1.2e-12  Score=93.41  Aligned_cols=39  Identities=41%  Similarity=0.774  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||++..
T Consensus       106 ~~l~~lH~~~i~H~di~p~Nil~~~~~~-~~l~dfg~~~~  144 (277)
T cd05577         106 CGLEHLHQRRIVYRDLKPENVLLDDHGN-VRISDLGLAVE  144 (277)
T ss_pred             HHHHHHHhCCcccCCCCHHHEEECCCCC-EEEccCcchhh
Confidence            7899999999999999999999999998 99999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.24  E-value=4.5e-11  Score=87.18  Aligned_cols=39  Identities=46%  Similarity=0.771  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||++..
T Consensus       136 ~~l~~lH~~~i~H~dL~p~Nil~~~~~~-~kl~dfg~~~~  174 (317)
T cd06635         136 QGLAYLHSHNMIHRDIKAGNILLTEPGQ-VKLADFGSASI  174 (317)
T ss_pred             HHHHHHHHCCcccCCCCcccEEECCCCC-EEEecCCCccc
Confidence            7899999999999999999999999998 99999998765

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0584|consensus

Probab=99.23  E-value=2.1e-12  Score=100.10  Aligned_cols=49  Identities=31%  Similarity=0.519  Sum_probs=39.8

Q ss_pred             HHHHHHHHC--CcEecCCCCCCEEEecC-CCeEEEEeccccee---cCcccceeeE
Q psy7471          73 ACLTFLHRH--GVVYRDLKLDNILLDAG-GSLLKLADFGRCAR---KKIKLFCDLL  122 (127)
Q Consensus        73 ~al~~lH~~--~iih~dlk~~nil~~~~-~~~~kl~dfg~a~~---~~~~~~~gt~  122 (127)
                      .||.|||++  .|||||||.+||++..+ +. |||.|+|+|..   .....+.||.
T Consensus       154 kGL~yLHs~~PPIIHRDLKCDNIFinG~~G~-VKIGDLGLAtl~r~s~aksvIGTP  208 (632)
T KOG0584|consen  154 KGLVYLHSQDPPIIHRDLKCDNIFVNGNLGE-VKIGDLGLATLLRKSHAKSVIGTP  208 (632)
T ss_pred             HHhhhhhcCCCCccccccccceEEEcCCcCc-eeecchhHHHHhhccccceeccCc
Confidence            789999998  79999999999999865 55 99999999986   2223356663

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.23  E-value=6.2e-12  Score=90.10  Aligned_cols=39  Identities=41%  Similarity=0.743  Sum_probs=35.9

Q ss_pred             HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+. +++|+||+|.||+++.++. ++|+|||+++.
T Consensus       118 ~~l~~lh~~~~i~H~dlkp~Nil~~~~~~-~kl~dfg~~~~  157 (288)
T cd06616         118 KALNYLKEELKIIHRDVKPSNILLDRNGN-IKLCDFGISGQ  157 (288)
T ss_pred             HHHHHHhhcCCeeccCCCHHHEEEccCCc-EEEeecchhHH
Confidence            689999975 9999999999999999988 99999999865

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.23  E-value=3.3e-11  Score=88.03  Aligned_cols=39  Identities=41%  Similarity=0.653  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       114 ~~l~~LH~~gi~H~dlkp~nili~~~~~-~~L~dfg~~~~  152 (330)
T cd07834         114 RGLKYLHSANVIHRDLKPSNILVNSNCD-LKICDFGLARG  152 (330)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEcccCceEe
Confidence            7899999999999999999999999988 99999999887

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.23  E-value=3.6e-11  Score=88.31  Aligned_cols=39  Identities=44%  Similarity=0.677  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.|++++.++. ++|+|||++..
T Consensus       119 ~aL~~LH~~~iiH~dl~p~Nili~~~~~-~~l~dfg~~~~  157 (328)
T cd07856         119 RGLKYVHSAGVVHRDLKPSNILINENCD-LKICDFGLARI  157 (328)
T ss_pred             HHHHHHHhCCcccCCCCHHHEeECCCCC-EEeCccccccc
Confidence            7899999999999999999999999888 99999998875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.23  E-value=1.9e-11  Score=83.98  Aligned_cols=39  Identities=23%  Similarity=0.345  Sum_probs=36.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.++|..+++|+|++|.||+++.+.. ++|+|||.+..
T Consensus       136 ~~l~~lh~~gi~H~Dl~p~Nill~~~~~-~~liDfg~~~~  174 (198)
T cd05144         136 EEIVKAYKHGIIHGDLSEFNILVDDDEK-IYIIDWPQMVS  174 (198)
T ss_pred             HHHHHHHHCCCCcCCCCcccEEEcCCCc-EEEEECCcccc
Confidence            6788999999999999999999998888 99999999865

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PHA02988 hypothetical protein; Provisional

Probab=99.23  E-value=1.2e-11  Score=89.07  Aligned_cols=39  Identities=21%  Similarity=0.141  Sum_probs=36.1

Q ss_pred             HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.. +++||||||.|++++.++. +||+|||+++.
T Consensus       133 ~~l~~lH~~~~~~Hrdlkp~nill~~~~~-~kl~dfg~~~~  172 (283)
T PHA02988        133 KGLYNLYKYTNKPYKNLTSVSFLVTENYK-LKIICHGLEKI  172 (283)
T ss_pred             HHHHHHHhcCCCCCCcCChhhEEECCCCc-EEEcccchHhh
Confidence            789999984 8999999999999999998 99999999875

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.23  E-value=1.3e-11  Score=86.86  Aligned_cols=39  Identities=31%  Similarity=0.521  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       108 ~~L~~lH~~~i~H~di~p~nil~~~~~~-~kl~dfg~~~~  146 (257)
T cd05040         108 NGMRYLESKRFIHRDLAARNILLASDDK-VKIGDFGLMRA  146 (257)
T ss_pred             HHHHHHHhCCccccccCcccEEEecCCE-EEecccccccc
Confidence            7899999999999999999999999988 99999998876

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>smart00090 RIO RIO-like kinase

Probab=99.23  E-value=2.4e-11  Score=86.13  Aligned_cols=38  Identities=26%  Similarity=0.380  Sum_probs=35.2

Q ss_pred             HHHHHHHHCC-cEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHG-VVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~-iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.+||..+ ++|+|++|.||+++ .+. ++++|||.+..
T Consensus       159 ~~l~~LH~~g~iiH~Dikp~NIli~-~~~-i~LiDFg~a~~  197 (237)
T smart00090      159 EEMRKLYKEGELVHGDLSEYNILVH-DGK-VVIIDVSQSVE  197 (237)
T ss_pred             HHHHHHHhcCCEEeCCCChhhEEEE-CCC-EEEEEChhhhc
Confidence            7889999999 99999999999999 677 99999999885

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.22  E-value=2.7e-11  Score=85.32  Aligned_cols=39  Identities=36%  Similarity=0.680  Sum_probs=37.1

Q ss_pred             HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+ .+++|+|++|.||+++.++. ++|+|||++..
T Consensus       110 ~~l~~lh~~~~~~H~~l~~~ni~~~~~~~-~~l~df~~~~~  149 (264)
T cd06623         110 KGLDYLHTKRHIIHRDIKPSNLLINSKGE-VKIADFGISKV  149 (264)
T ss_pred             HHHHHHhccCCCccCCCCHHHEEECCCCC-EEEccCcccee
Confidence            78999999 99999999999999999998 99999998886

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.22  E-value=4.3e-11  Score=88.29  Aligned_cols=39  Identities=36%  Similarity=0.634  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       129 ~aL~~LH~~gi~H~dlkp~Nill~~~~~-~kL~dfg~~~~  167 (343)
T cd07851         129 RGLKYIHSAGIIHRDLKPSNIAVNEDCE-LKILDFGLARH  167 (343)
T ss_pred             HHHHHHHHCCeecCCCCHHHeEECCCCC-EEEcccccccc
Confidence            7899999999999999999999999998 99999999876

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.21  E-value=3.4e-12  Score=90.45  Aligned_cols=39  Identities=28%  Similarity=0.466  Sum_probs=35.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC-----CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG-----SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~-----~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|++|.||+++.+.     . ++++|||+++.
T Consensus       117 ~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~-~~l~dfg~~~~  160 (269)
T cd05044         117 KGCVYLEQMHFIHRDLAARNCLVSEKGYDADRV-VKIGDFGLARD  160 (269)
T ss_pred             HHHHHHHhCCcccCCCChheEEEecCCCCCCcc-eEECCcccccc
Confidence            678999999999999999999999877     6 99999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.21  E-value=4.1e-11  Score=83.77  Aligned_cols=39  Identities=38%  Similarity=0.662  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||++..
T Consensus       114 ~~l~~lh~~~~~H~dl~~~nil~~~~~~-~~l~d~~~~~~  152 (258)
T cd08215         114 LALKYLHSRKILHRDIKPQNIFLTSNGL-VKLGDFGISKV  152 (258)
T ss_pred             HHHHHHHhCCEecccCChHHeEEcCCCc-EEECCccceee
Confidence            6899999999999999999999999888 99999998876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.21  E-value=3.8e-12  Score=87.78  Aligned_cols=38  Identities=34%  Similarity=0.580  Sum_probs=34.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.++|..+++|+|++|.||+++ .+. ++++|||+++.
T Consensus       106 ~~l~~lH~~~i~H~Dl~p~Nil~~-~~~-~~liDf~~a~~  143 (211)
T PRK14879        106 RLVGKLHSAGIIHGDLTTSNMILS-GGK-IYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHhCCcccCCCCcccEEEE-CCC-EEEEECCcccC
Confidence            578899999999999999999999 667 99999999876

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.21  E-value=2.1e-12  Score=91.61  Aligned_cols=39  Identities=33%  Similarity=0.652  Sum_probs=36.0

Q ss_pred             HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||. .+++|+||+|.||+++.++. ++|+|||++..
T Consensus       124 ~~l~~lh~~~~i~H~dl~~~nil~~~~~~-~~l~dfg~~~~  163 (269)
T cd08528         124 LALRYLHKEKRIVHRDLTPNNIMLGEDDK-VTITDFGLAKQ  163 (269)
T ss_pred             HHHHHhccCCceeecCCCHHHEEECCCCc-EEEecccceee
Confidence            68999996 68999999999999999998 99999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.20  E-value=5.4e-11  Score=87.75  Aligned_cols=40  Identities=33%  Similarity=0.579  Sum_probs=35.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++..+..++++|||+++.
T Consensus       125 ~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~  164 (342)
T cd07854         125 RGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARI  164 (342)
T ss_pred             HHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCccccee
Confidence            7899999999999999999999986543389999999875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.20  E-value=4.7e-11  Score=83.03  Aligned_cols=39  Identities=46%  Similarity=0.805  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.+||.++++|+|++|.||+++.++. ++|+|||.+..
T Consensus       109 ~~l~~lh~~~i~h~dl~p~ni~i~~~~~-~~l~d~~~~~~  147 (253)
T cd05122         109 KGLEYLHSNGIIHRDIKAANILLTSDGE-VKLIDFGLSAQ  147 (253)
T ss_pred             HHHHHhhcCCEecCCCCHHHEEEccCCe-EEEeecccccc
Confidence            6899999999999999999999999888 99999998876

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.20  E-value=1.7e-11  Score=86.61  Aligned_cols=39  Identities=44%  Similarity=0.792  Sum_probs=36.5

Q ss_pred             HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+ .+++|+||+|.||+++.++. ++|+|||.+..
T Consensus       111 ~~l~~lH~~~~i~H~dl~~~ni~~~~~~~-~~l~d~g~~~~  150 (265)
T cd06605         111 KGLTYLHEKHKIIHRDVKPSNILVNSRGQ-IKLCDFGVSGQ  150 (265)
T ss_pred             HHHHHHcCCCCeecCCCCHHHEEECCCCC-EEEeecccchh
Confidence            68999999 99999999999999999988 99999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.19  E-value=1.8e-11  Score=89.93  Aligned_cols=39  Identities=44%  Similarity=0.686  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       118 ~~L~~LH~~~i~H~dl~p~nill~~~~~-~kl~d~g~~~~  156 (337)
T cd07852         118 KALKYIHSGNVIHRDLKPSNILLNSDCR-VKLADFGLARS  156 (337)
T ss_pred             HHHHHHHHCCeecCCCCHHHEEEcCCCc-EEEeeccchhc
Confidence            7899999999999999999999999999 99999998875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.19  E-value=6.5e-12  Score=88.77  Aligned_cols=39  Identities=46%  Similarity=0.916  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       104 ~~l~~lH~~~~~h~dl~~~nilv~~~~~-~~l~df~~~~~  142 (262)
T cd05572         104 LAFEYLHNRGIIYRDLKPENLLLDSNGY-VKLVDFGFAKK  142 (262)
T ss_pred             HHHHHHhhCCcccCCCCHHHEEEcCCCC-EEEeeCCcccc
Confidence            7899999999999999999999999998 99999999886

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.19  E-value=5.4e-12  Score=86.40  Aligned_cols=38  Identities=34%  Similarity=0.479  Sum_probs=34.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.++|..+++|+|++|.|++++ .+. ++++|||+++.
T Consensus       101 ~~l~~lH~~gi~H~Dl~~~Nil~~-~~~-~~liDfg~a~~  138 (199)
T TIGR03724       101 RLVGKLHKAGIVHGDLTTSNIIVR-DDK-LYLIDFGLGKY  138 (199)
T ss_pred             HHHHHHHHCCeecCCCCcceEEEE-CCc-EEEEECCCCcC
Confidence            578899999999999999999999 677 99999999876

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.19  E-value=1.2e-10  Score=82.96  Aligned_cols=39  Identities=46%  Similarity=0.734  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+|++|.||+++.++. ++|+|||++..
T Consensus       118 ~al~~LH~~~i~h~~l~~~nili~~~~~-~~l~dfg~~~~  156 (287)
T cd07838         118 RGVDFLHSHRIVHRDLKPQNILVTSDGQ-VKIADFGLARI  156 (287)
T ss_pred             HHHHHHHHCCeeeccCChhhEEEccCCC-EEEeccCccee
Confidence            7899999999999999999999999988 99999998876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.18  E-value=4e-11  Score=84.26  Aligned_cols=39  Identities=51%  Similarity=0.869  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+||+|.||+++.++. ++|+|||++..
T Consensus       104 ~~L~~lH~~~i~H~di~~~nil~~~~~~-~~l~dfg~~~~  142 (265)
T cd05579         104 LALEYLHSNGIIHRDLKPDNILIDSNGH-LKLTDFGLSKV  142 (265)
T ss_pred             HHHHHHHHcCeecCCCCHHHeEEcCCCC-EEEEecccchh
Confidence            7899999999999999999999999998 99999998775

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.18  E-value=9.2e-12  Score=86.94  Aligned_cols=39  Identities=51%  Similarity=0.835  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+|++|.||+++.++. ++|+|||.+..
T Consensus       112 ~~l~~lh~~~~~h~dl~p~ni~i~~~~~-~~l~d~~~~~~  150 (260)
T cd06606         112 EGLAYLHSNGIVHRDIKGANILVDSDGV-VKLADFGCAKR  150 (260)
T ss_pred             HHHHHHHHCCccccCCCHHHEEEcCCCC-EEEcccccEEe
Confidence            7899999999999999999999999888 99999998886

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.17  E-value=5.2e-11  Score=85.59  Aligned_cols=39  Identities=54%  Similarity=0.967  Sum_probs=36.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++++|||++..
T Consensus       126 ~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~~l~d~g~~~~  164 (285)
T cd06648         126 KALSFLHAQGVIHRDIKSDSILLTSDGR-VKLSDFGFCAQ  164 (285)
T ss_pred             HHHHHHHhCCeecCCCChhhEEEcCCCc-EEEcccccchh
Confidence            6899999999999999999999999998 99999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.17  E-value=1.8e-11  Score=86.36  Aligned_cols=38  Identities=29%  Similarity=0.486  Sum_probs=34.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++..+|..+++|+|++|.|++++.++  ++++|||..+.
T Consensus       146 ~~l~~lH~~gi~H~Dikp~Nili~~~g--i~liDfg~~~~  183 (232)
T PRK10359        146 ASIESLHQHGMVSGDPHKGNFIVSKNG--LRIIDLSGKRC  183 (232)
T ss_pred             HHHHHHHHcCCccCCCChHHEEEeCCC--EEEEECCCccc
Confidence            678999999999999999999998765  99999998765

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.14  E-value=1.3e-10  Score=82.67  Aligned_cols=39  Identities=49%  Similarity=0.824  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+||+|.||+++.++. ++|+|||.+..
T Consensus       109 ~~l~~LH~~~i~H~dl~p~nili~~~~~-~~l~df~~~~~  147 (283)
T cd05118         109 QGLAFCHSHGILHRDLKPENLLINTEGV-LKLADFGLARS  147 (283)
T ss_pred             HHHHHHHHCCeeecCcCHHHEEECCCCc-EEEeeeeeeEe
Confidence            7899999999999999999999999888 99999998876

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.13  E-value=1.6e-10  Score=82.13  Aligned_cols=39  Identities=46%  Similarity=0.728  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+|++|.||+++.++. ++|+|||+++.
T Consensus       109 ~~l~~LH~~~i~H~~l~~~ni~~~~~~~-~~l~d~g~~~~  147 (282)
T cd07829         109 RGLAYCHSHRILHRDLKPQNILINRDGV-LKLADFGLARA  147 (282)
T ss_pred             HHHHHHHHCCcccCCCChheEEEcCCCC-EEEecCCcccc
Confidence            7899999999999999999999999998 99999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.13  E-value=8.6e-11  Score=86.15  Aligned_cols=40  Identities=38%  Similarity=0.548  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK  113 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~  113 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||+++..
T Consensus       130 ~aL~~LH~~~i~H~dl~~~nill~~~~~-~kl~dfg~~~~~  169 (335)
T PTZ00024        130 NGLNVLHKWYFMHRDLSPANIFINSKGI-CKIADFGLARRY  169 (335)
T ss_pred             HHHHHHHhCCeecccccHHHeEECCCCC-EEECCccceeec
Confidence            7899999999999999999999999998 999999998763

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.13  E-value=1.8e-10  Score=83.98  Aligned_cols=39  Identities=46%  Similarity=0.814  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       132 ~al~~LH~~gi~H~dl~p~nili~~~~~-~kL~dfg~~~~  170 (313)
T cd06633         132 QGLAYLHSHNMIHRDIKAGNILLTEPGQ-VKLADFGSASK  170 (313)
T ss_pred             HHHHHHHHCCeecCCCChhhEEECCCCC-EEEeecCCCcc
Confidence            7899999999999999999999999998 99999998765

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.13  E-value=1.3e-10  Score=83.01  Aligned_cols=39  Identities=46%  Similarity=0.745  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+|++|.||+++.++. ++|+|||+++.
T Consensus       110 ~~L~~lH~~~~~H~dl~p~nil~~~~~~-~~l~df~~~~~  148 (283)
T cd07835         110 QGIAYCHSHRVLHRDLKPQNLLIDREGA-LKLADFGLARA  148 (283)
T ss_pred             HHHHHHHHCCeeCCCCCHHHEEEcCCCc-EEEeecccccc
Confidence            7899999999999999999999999888 99999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.13  E-value=3.7e-11  Score=81.43  Aligned_cols=38  Identities=32%  Similarity=0.420  Sum_probs=35.0

Q ss_pred             HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.++|. .+++|+|++|.||+++ ++. ++++|||.+..
T Consensus       125 ~~l~~lh~~~~ivH~Dl~p~Nili~-~~~-~~liDfg~a~~  163 (187)
T cd05119         125 ELMRKLYREAGLVHGDLSEYNILVD-DGK-VYIIDVPQAVE  163 (187)
T ss_pred             HHHHHHhhccCcCcCCCChhhEEEE-CCc-EEEEECccccc
Confidence            67889999 9999999999999999 777 99999999876

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0671|consensus

Probab=99.13  E-value=1.5e-10  Score=85.75  Aligned_cols=40  Identities=33%  Similarity=0.496  Sum_probs=34.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCC-------------------eEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGS-------------------LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~-------------------~~kl~dfg~a~~  112 (127)
                      .++.|||+.+++|-||||+|||+.+...                   .++++|||.|..
T Consensus       203 ~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf  261 (415)
T KOG0671|consen  203 ESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATF  261 (415)
T ss_pred             HHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcce
Confidence            7899999999999999999999854321                   178999999887

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.12  E-value=1.2e-11  Score=86.62  Aligned_cols=39  Identities=46%  Similarity=0.755  Sum_probs=36.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+|+||.|++++.++. ++++|||.+..
T Consensus        96 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~~l~df~~~~~  134 (237)
T cd05576          96 VALDALHREGIVCRDLNPNNILLDDRGH-IQLTYFSRWSE  134 (237)
T ss_pred             HHHHHHHhCCeeccCCCHHHEEEcCCCC-EEEecccchhc
Confidence            7899999999999999999999999999 99999997654

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0200|consensus

Probab=99.12  E-value=9.3e-11  Score=92.98  Aligned_cols=40  Identities=30%  Similarity=0.473  Sum_probs=37.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK  113 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~  113 (127)
                      .|++||++.+++||||..+|||+..+.. +|++|||+|+..
T Consensus       429 ~GMe~L~~~~~vHRDLAaRNVLi~~~~~-~kIaDFGlar~~  468 (609)
T KOG0200|consen  429 NGMEYLASVPCVHRDLAARNVLITKNKV-IKIADFGLARDH  468 (609)
T ss_pred             HHHHHHhhCCccchhhhhhhEEecCCCE-EEEccccceecc
Confidence            6899999999999999999999999988 999999999973

>KOG1166|consensus

Probab=99.12  E-value=1.9e-10  Score=94.12  Aligned_cols=40  Identities=38%  Similarity=0.502  Sum_probs=32.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC------CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG------SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~------~~~kl~dfg~a~~  112 (127)
                      .-|+.||..+|||.||||+|+++...-      ..++|+|||.+=.
T Consensus       805 ~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD  850 (974)
T KOG1166|consen  805 RIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID  850 (974)
T ss_pred             HHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence            458899999999999999999985331      1389999998655

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.12  E-value=8.6e-11  Score=84.92  Aligned_cols=39  Identities=51%  Similarity=0.892  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+++|+|++|.||+++.++. ++|+|||++..
T Consensus       127 ~~l~~lH~~givH~dl~p~Nilv~~~~~-~~l~dfg~~~~  165 (292)
T cd06657         127 KALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQ  165 (292)
T ss_pred             HHHHHHHHCCeecCCCCHHHEEECCCCC-EEEccccccee
Confidence            7899999999999999999999999988 99999998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.10  E-value=1.4e-11  Score=90.19  Aligned_cols=36  Identities=28%  Similarity=0.612  Sum_probs=33.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccc
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGR  109 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~  109 (127)
                      .|+.|||+++++||||||.||+++.++. ++++||+.
T Consensus       112 ~aL~~lH~~~ivHrDlkp~Nill~~~~~-~~~~~~~~  147 (328)
T cd08226         112 RGLNYLHQNGYIHRNIKASHILISGDGL-VSLSGLSH  147 (328)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEeCCCc-EEEechHH
Confidence            7899999999999999999999999988 99999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.10  E-value=4.9e-11  Score=83.46  Aligned_cols=39  Identities=54%  Similarity=0.943  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|+|..+++|+|++|.||+++.++. ++|+|||++..
T Consensus       104 ~~l~~lh~~~~~H~~l~p~ni~~~~~~~-~~l~d~~~~~~  142 (250)
T cd05123         104 LALEYLHSLGIIYRDLKPENILLDADGH-IKLTDFGLAKE  142 (250)
T ss_pred             HHHHHHHHCCceecCCCcceEEEcCCCc-EEEeecCccee
Confidence            7899999999999999999999999998 99999998876

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG1151|consensus

Probab=99.10  E-value=6e-12  Score=95.36  Aligned_cols=39  Identities=38%  Similarity=0.615  Sum_probs=34.4

Q ss_pred             HHHHHHHHC--CcEecCCCCCCEEEecC---CCeEEEEeccccee
Q psy7471          73 ACLTFLHRH--GVVYRDLKLDNILLDAG---GSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~--~iih~dlk~~nil~~~~---~~~~kl~dfg~a~~  112 (127)
                      .|+.||...  .|||-||||.|||+...   +. +||+|||+++.
T Consensus       579 nAL~YLNEikpPIIHYDLKPgNILLv~GtacGe-IKITDFGLSKI  622 (775)
T KOG1151|consen  579 NALKYLNEIKPPIIHYDLKPGNILLVNGTACGE-IKITDFGLSKI  622 (775)
T ss_pred             HHHHHHhccCCCeeeeccCCccEEEecCcccce-eEeeecchhhh
Confidence            789999986  79999999999998743   55 89999999997

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.09  E-value=1.2e-10  Score=84.66  Aligned_cols=39  Identities=44%  Similarity=0.731  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++++|||++..
T Consensus       126 ~~l~~LH~~~i~H~dl~p~nil~~~~~~-~kl~dfg~~~~  164 (308)
T cd06634         126 QGLAYLHSHNMIHRDVKAGNILLSEPGL-VKLGDFGSASI  164 (308)
T ss_pred             HHHHHHHhCCcccCCCCHHhEEECCCCc-EEECCccccee
Confidence            6799999999999999999999999888 99999998875

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG1027|consensus

Probab=99.08  E-value=1.7e-10  Score=92.13  Aligned_cols=40  Identities=40%  Similarity=0.586  Sum_probs=35.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecC---C-CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAG---G-SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~---~-~~~kl~dfg~a~~  112 (127)
                      .||++||+.+|+||||||.|||+...   + .+++|+|||+++.
T Consensus       617 ~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk  660 (903)
T KOG1027|consen  617 SGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK  660 (903)
T ss_pred             HHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence            78999999999999999999999863   3 2489999999998

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.07  E-value=1.9e-10  Score=82.36  Aligned_cols=39  Identities=54%  Similarity=0.822  Sum_probs=36.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||..+++|+|++|.||+++.++. ++|+|||++..
T Consensus       127 ~~L~~lH~~gi~H~dl~p~ni~i~~~~~-~~l~d~~~~~~  165 (286)
T cd06614         127 QGLEYLHSQNVIHRDIKSDNILLSKDGS-VKLADFGFAAQ  165 (286)
T ss_pred             HHHHHHHhCCeeeCCCChhhEEEcCCCC-EEECccchhhh
Confidence            7899999999999999999999999888 99999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PRK10345 hypothetical protein; Provisional

Probab=99.06  E-value=3.7e-10  Score=78.73  Aligned_cols=37  Identities=24%  Similarity=0.152  Sum_probs=30.2

Q ss_pred             HH-HHHHHCCcEecCCCCCCEEEecCC----CeEEEEecccce
Q psy7471          74 CL-TFLHRHGVVYRDLKLDNILLDAGG----SLLKLADFGRCA  111 (127)
Q Consensus        74 al-~~lH~~~iih~dlk~~nil~~~~~----~~~kl~dfg~a~  111 (127)
                      ++ .|||+++|+||||||+||+++...    . ++|+||+.++
T Consensus       116 ~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~-~~LiDg~G~~  157 (210)
T PRK10345        116 KLKRYLLDNRIVTMELKPQNILCQRISESEVI-PVVCDNIGES  157 (210)
T ss_pred             HHHHHHHHCCEeecCCCHHHEEEeccCCCCCc-EEEEECCCCc
Confidence            45 899999999999999999998532    5 9999944333

>KOG0665|consensus

Probab=99.05  E-value=2e-10  Score=83.54  Aligned_cols=39  Identities=36%  Similarity=0.638  Sum_probs=37.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+|+||||||+||++..++. +||.|||+|+.
T Consensus       129 ~~ik~lhs~~IihRdLkPsnivv~~~~~-lKi~dfg~ar~  167 (369)
T KOG0665|consen  129 CGIKHLHSAGIIHRDLKPSNIVVNSDCT-LKILDFGLART  167 (369)
T ss_pred             HHHHHHHhcceeecccCcccceecchhh-eeeccchhhcc
Confidence            7899999999999999999999999999 99999999997

>KOG0670|consensus

Probab=98.99  E-value=1.5e-09  Score=83.67  Aligned_cols=40  Identities=40%  Similarity=0.671  Sum_probs=36.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||..|-.++++|.||||.|||+......+||||||.|..
T Consensus       547 lALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~  586 (752)
T KOG0670|consen  547 LALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASF  586 (752)
T ss_pred             HHHHHHHhcCeeecccCccceEeccCcceeeeccCccccc
Confidence            7889999999999999999999998776689999998775

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.94  E-value=9.4e-10  Score=79.76  Aligned_cols=39  Identities=26%  Similarity=0.523  Sum_probs=36.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+|+||+|.||+++.++. ++++||+.+..
T Consensus       112 ~~L~~LH~~~ivH~dlk~~Nili~~~~~-~kl~d~~~~~~  150 (314)
T cd08216         112 NALDYIHSKGFIHRSVKASHILLSGDGK-VVLSGLRYSVS  150 (314)
T ss_pred             HHHHHHHHCCeecCCCCcceEEEecCCc-eEEecCcccee
Confidence            7899999999999999999999999898 99999998764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG1290|consensus

Probab=98.92  E-value=3e-09  Score=81.26  Aligned_cols=73  Identities=23%  Similarity=0.383  Sum_probs=54.2

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------cc-------cCchhHHHHHHHhhcchh------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------IT-------NDTNSILRFLLLLLCAGD------------------   72 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~-------~~~~~~~~~~~~~~~~g~------------------   72 (127)
                      +.-.+|.+.++||=|.|++||+|+...        +.       .....|+.++.+.-.+..                  
T Consensus        75 F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs  154 (590)
T KOG1290|consen   75 FNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS  154 (590)
T ss_pred             ccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence            334789999999999999999998876        10       111255666665222210                  


Q ss_pred             -------------------------------------------HHHHHHHHC-CcEecCCCCCCEEEecC
Q psy7471          73 -------------------------------------------ACLTFLHRH-GVVYRDLKLDNILLDAG   98 (127)
Q Consensus        73 -------------------------------------------~al~~lH~~-~iih~dlk~~nil~~~~   98 (127)
                                                                 .||.|||.. +|||-||||+|||+...
T Consensus       155 GpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  155 GPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence                                                       789999975 99999999999999865

>KOG1024|consensus

Probab=98.91  E-value=1.6e-09  Score=81.12  Aligned_cols=39  Identities=28%  Similarity=0.457  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|++|||++++||+||..+|+++++.-. +||+|-.++|.
T Consensus       407 ~am~hlh~~~ViHkDiAaRNCvIdd~Lq-VkltDsaLSRD  445 (563)
T KOG1024|consen  407 MAMEHLHNHGVIHKDIAARNCVIDDQLQ-VKLTDSALSRD  445 (563)
T ss_pred             HHHHHHHhcCcccchhhhhcceehhhee-EEeccchhccc
Confidence            7899999999999999999999999987 99999999887

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.83  E-value=6.5e-09  Score=85.93  Aligned_cols=80  Identities=20%  Similarity=0.255  Sum_probs=56.1

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------c---ccCchhHHHHH------------------------HHhhcchh
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------I---TNDTNSILRFL------------------------LLLLCAGD   72 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~---~~~~~~~~~~~------------------------~~~~~~g~   72 (127)
                      ..++..++||+|+||.||+|+++.         +   ......+...+                        ++|+.+|+
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~  769 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKN  769 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCc
Confidence            346667899999999999999753         0   00111223322                        23666654


Q ss_pred             ---------------------HHHHHHH---HCCcEecCCCCCCEEEecCCCeEEEEecccc
Q psy7471          73 ---------------------ACLTFLH---RHGVVYRDLKLDNILLDAGGSLLKLADFGRC  110 (127)
Q Consensus        73 ---------------------~al~~lH---~~~iih~dlk~~nil~~~~~~~~kl~dfg~a  110 (127)
                                           .|+.|||   ..+++|||+||.||+++.+.. .++. |+.+
T Consensus       770 L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~-~~~~-~~~~  829 (968)
T PLN00113        770 LSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE-PHLR-LSLP  829 (968)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCc-eEEE-eccc
Confidence                                 7899999   569999999999999998877 6654 4443

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.79  E-value=2.6e-08  Score=68.20  Aligned_cols=39  Identities=51%  Similarity=0.763  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.+||.++++|+|++|.|++++.... ++|+|||.+..
T Consensus       109 ~~l~~lh~~~i~h~di~~~ni~v~~~~~-~~l~d~g~~~~  147 (225)
T smart00221      109 EALEYLHSLGIVHRDLKPENILLGMDGL-VKLADFGLARF  147 (225)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEeeCceeeE
Confidence            6789999999999999999999999888 99999998886

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.79  E-value=6.5e-09  Score=73.76  Aligned_cols=39  Identities=38%  Similarity=0.529  Sum_probs=36.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.+||.+||+|+|++|.|||++.++. ++|+|||.+..
T Consensus       153 ~~l~~lH~~GI~HrDlkp~NILv~~~~~-v~LIDfg~~~~  191 (239)
T PRK01723        153 QLIARFHDAGVYHADLNAHNILLDPDGK-FWLIDFDRGEL  191 (239)
T ss_pred             HHHHHHHHCCCCCCCCCchhEEEcCCCC-EEEEECCCccc
Confidence            6789999999999999999999998888 99999998876

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.79  E-value=3.8e-09  Score=80.96  Aligned_cols=37  Identities=32%  Similarity=0.464  Sum_probs=33.8

Q ss_pred             HHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          75 LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        75 l~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +..+|..|++|+|++|.|++++.++. ++++|||++..
T Consensus       270 l~ql~~~g~~H~D~hPgNilv~~~g~-i~liDfG~~~~  306 (437)
T TIGR01982       270 LNQVLRDGFFHADLHPGNIFVLKDGK-IIALDFGIVGR  306 (437)
T ss_pred             HHHHHhCCceeCCCCcccEEECCCCc-EEEEeCCCeeE
Confidence            45688899999999999999998888 99999999876

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0606|consensus

Probab=98.75  E-value=1.5e-08  Score=83.25  Aligned_cols=88  Identities=31%  Similarity=0.557  Sum_probs=66.0

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcccccC---chhHHHHHHH---------hhcchh----------------HH
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRSITND---TNSILRFLLL---------LLCAGD----------------AC   74 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~---~~~~~~~~~~---------~~~~g~----------------~a   74 (127)
                      ......++|...+.|..|+||.||..+++...+.   +.+...++..         +.. |+                .|
T Consensus        77 ~~~p~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~lilRnilt~a~npfvv-gDc~tllk~~g~lPvdmvla  155 (1205)
T KOG0606|consen   77 RRAPSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLILRNILTFAGNPFVV-GDCATLLKNIGPLPVDMVLA  155 (1205)
T ss_pred             ccCCCccccceeEeeccCCCCceeeeeccccccchhhcccccchhhhccccccCCccee-chhhhhcccCCCCcchhhHH
Confidence            3445568899999999999999999999851110   1111111111         111 11                67


Q ss_pred             HHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          75 LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        75 l~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ++|+|+-+|+|||+||+|.++..-+. +|+.|||+++.
T Consensus       156 ~Eylh~ygivhrdlkpdnllIT~mGh-iKlTDfgLsk~  192 (1205)
T KOG0606|consen  156 VEYLHSYGIVHRDLKPDNLLITSMGH-IKLTDFGLSKK  192 (1205)
T ss_pred             hHhhccCCeecCCCCCCcceeeeccc-ccccchhhhhh
Confidence            99999999999999999999999999 99999999987

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.74  E-value=1e-08  Score=83.50  Aligned_cols=27  Identities=11%  Similarity=0.283  Sum_probs=23.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG   99 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~   99 (127)
                      .||.|||+++|+||||||+|||++..+
T Consensus        91 ~al~~lH~~gIvHrDlKP~NiLl~~~~  117 (793)
T PLN00181         91 EIVNAAHSQGIVVHNVRPSCFVMSSFN  117 (793)
T ss_pred             HHHHHHHhCCeeeccCCchhEEEcccC
Confidence            459999999999999999999996533

>KOG4158|consensus

Probab=98.73  E-value=9.7e-09  Score=77.31  Aligned_cols=40  Identities=53%  Similarity=0.800  Sum_probs=33.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecC--CC-eEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAG--GS-LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~--~~-~~kl~dfg~a~~  112 (127)
                      +|+.|||.+++.|||+|.+|||+.-+  .. .+.++|||++-.
T Consensus       352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA  394 (598)
T KOG4158|consen  352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA  394 (598)
T ss_pred             HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeee
Confidence            89999999999999999999997533  22 378999998654

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.68  E-value=9.3e-08  Score=64.07  Aligned_cols=39  Identities=51%  Similarity=0.848  Sum_probs=36.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec-CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA-GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~-~~~~~kl~dfg~a~~  112 (127)
                      .++.+||..+++|+|++|.||+++. ... ++++||+.+..
T Consensus       103 ~~l~~lh~~~~~H~dl~~~ni~~~~~~~~-~~l~d~~~~~~  142 (215)
T cd00180         103 EGLEYLHSNGIIHRDLKPENILLDSDNGK-VKLADFGLSKL  142 (215)
T ss_pred             HHHHHHHhCCeeccCCCHhhEEEeCCCCc-EEEecCCceEE
Confidence            6799999999999999999999998 777 99999998876

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.67  E-value=1.1e-08  Score=65.73  Aligned_cols=39  Identities=31%  Similarity=0.371  Sum_probs=34.7

Q ss_pred             HHHHHHHHC---CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRH---GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~---~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.++|..   +++|+|++|.|++++..+. ++++||+.+..
T Consensus        97 ~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~-~~l~Df~~~~~  138 (155)
T cd05120          97 ELLAKLHQLPLLVLCHGDLHPGNILVDDGKI-LGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHhCCCceEEEecCCCcceEEEECCcE-EEEEecccccC
Confidence            568899984   6999999999999998777 99999999876

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.58  E-value=2.6e-07  Score=67.23  Aligned_cols=39  Identities=38%  Similarity=0.574  Sum_probs=30.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..+++||..+++|.||+|+|++++.++. +.|.||+....
T Consensus       156 ~lvA~Lh~~GlVHgdi~~~nfll~~~G~-v~Lg~F~~~~r  194 (288)
T PF14531_consen  156 RLVANLHSYGLVHGDIKPENFLLDQDGG-VFLGDFSSLVR  194 (288)
T ss_dssp             HHHHHHHHTTEEEST-SGGGEEE-TTS--EEE--GGGEEE
T ss_pred             HHHHHHhhcceEecccceeeEEEcCCCC-EEEcChHHHee
Confidence            4467999999999999999999999999 99999987665

>KOG0590|consensus

Probab=98.56  E-value=9.6e-08  Score=75.84  Aligned_cols=39  Identities=41%  Similarity=0.740  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|+|..++.|||+||+|+++...+. +|++|||.+..
T Consensus       431 ~Gv~y~h~~GiahrdlK~enll~~~~g~-lki~Dfg~~~v  469 (601)
T KOG0590|consen  431 RGVKYLHSMGLAHRDLKLENLLVTENGI-LKIIDFGAASV  469 (601)
T ss_pred             HHHHHHHhcCceeccCccccEEEecCCc-eEEeecCccee
Confidence            7899999999999999999999999998 99999998775

>KOG0603|consensus

Probab=98.54  E-value=6.9e-09  Score=80.97  Aligned_cols=39  Identities=46%  Similarity=0.795  Sum_probs=37.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|++++|..++++||+|++||+++..+. +++.|||+++.
T Consensus       108 Lald~lh~l~iiyrd~k~enilld~~Gh-i~~tdfglske  146 (612)
T KOG0603|consen  108 LALDHLHKLGIAYRDYKLENVLLLLEGH-IKLTDFGLSKE  146 (612)
T ss_pred             HHHhhcchhHHHHhcccccceeecccCc-cccCCchhhhH
Confidence            6789999999999999999999999999 99999999998

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.44  E-value=1.5e-06  Score=57.68  Aligned_cols=38  Identities=34%  Similarity=0.386  Sum_probs=33.3

Q ss_pred             HHHHHHHHCCc-----EecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGV-----VYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~i-----ih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++..||..++     +|+|++|.||+++ .+. ++++||+.+..
T Consensus        94 ~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~-~~liDf~~a~~  136 (170)
T cd05151          94 KLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGR-LWLIDWEYAGM  136 (170)
T ss_pred             HHHHHHhCCCCCCceeecCCCCcCcEEEE-CCe-EEEEecccccC
Confidence            56889999875     9999999999999 556 99999998876

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.42  E-value=9.4e-08  Score=74.89  Aligned_cols=34  Identities=24%  Similarity=0.360  Sum_probs=30.3

Q ss_pred             HHHCCcEecCCCCCCEEEecCC----CeEEEEeccccee
Q psy7471          78 LHRHGVVYRDLKLDNILLDAGG----SLLKLADFGRCAR  112 (127)
Q Consensus        78 lH~~~iih~dlk~~nil~~~~~----~~~kl~dfg~a~~  112 (127)
                      +...|++|+|++|.||+++.++    . ++++|||+...
T Consensus       276 if~~GffHaDpHPGNIlv~~~g~~~~~-i~llDFGivg~  313 (537)
T PRK04750        276 VFRDGFFHADMHPGNIFVSYDPPENPR-YIALDFGIVGS  313 (537)
T ss_pred             HHhCCeeeCCCChHHeEEecCCCCCCe-EEEEecceEEE
Confidence            4567999999999999999887    6 99999999876

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.21  E-value=1.6e-06  Score=61.09  Aligned_cols=39  Identities=46%  Similarity=0.813  Sum_probs=35.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC-CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG-SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~-~~~kl~dfg~a~~  112 (127)
                      .++.|+|..+++|||+||.|++++... . ++++|||.++.
T Consensus       112 ~~l~~~H~~~~~hrd~kp~nil~~~~~~~-~~l~dfg~~~~  151 (384)
T COG0515         112 SALEYLHSKGIIHRDIKPENILLDRDGRV-VKLIDFGLAKL  151 (384)
T ss_pred             HHHHHHHhCCeeccCCCHHHeeecCCCCe-EEEeccCccee
Confidence            448899999999999999999999887 6 99999999875

>KOG1240|consensus

Probab=98.19  E-value=7.6e-07  Score=73.94  Aligned_cols=39  Identities=33%  Similarity=0.442  Sum_probs=35.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.-+|..+|+|+|||.+|||+.+-++ +.|+||..-|.
T Consensus       131 ~al~qcH~~gVcHGDIKsENILiTSWNW-~~LtDFAsFKP  169 (1431)
T KOG1240|consen  131 KALSQCHKLGVCHGDIKSENILITSWNW-LYLTDFASFKP  169 (1431)
T ss_pred             HHHHHHHHcCccccccccceEEEeeech-hhhhcccccCC
Confidence            7899999999999999999999999999 99999975543

>KOG3087|consensus

Probab=98.18  E-value=7.7e-07  Score=61.09  Aligned_cols=40  Identities=33%  Similarity=0.464  Sum_probs=34.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCe--EEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSL--LKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~--~kl~dfg~a~~  112 (127)
                      ..+.-||.+++||.||...||++.+++.+  +.++|||++..
T Consensus       124 ~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  124 ELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             HHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            56788999999999999999999877653  48999999765

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.16  E-value=1.7e-06  Score=59.52  Aligned_cols=39  Identities=51%  Similarity=0.898  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.+||..+++|+|++|.|++++.++. ++++|||.+..
T Consensus        98 ~~l~~lh~~~i~h~~i~~~ni~~~~~~~-~~l~d~~~~~~  136 (244)
T smart00220       98 SALEYLHSNGIIHRDLKPENILLDEDGH-VKLADFGLARQ  136 (244)
T ss_pred             HHHHHHHHcCeecCCcCHHHeEECCCCc-EEEccccceee
Confidence            5699999999999999999999999988 99999999876

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.93  E-value=1.4e-05  Score=54.89  Aligned_cols=38  Identities=34%  Similarity=0.519  Sum_probs=33.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .-+.-||..+|+|.||.+.|+++....  +.++|||+++.
T Consensus       103 ~~vg~lH~~givHGDLTtsNiIl~~~~--i~~IDfGLg~~  140 (204)
T COG3642         103 RLVGKLHKAGIVHGDLTTSNIILSGGR--IYFIDFGLGEF  140 (204)
T ss_pred             HHHHHHHhcCeecCCCccceEEEeCCc--EEEEECCcccc
Confidence            446789999999999999999998654  89999999886

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.83  E-value=2e-05  Score=54.52  Aligned_cols=38  Identities=21%  Similarity=0.298  Sum_probs=31.8

Q ss_pred             HHHHHH-HHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFL-HRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~l-H~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++..+ |..+++|+||++.||++. ++. +.++||+-+-.
T Consensus       135 ~~l~~l~H~~glVHGDLs~~NIL~~-~~~-v~iIDF~qav~  173 (197)
T cd05146         135 SMMKQLYKECNLVHADLSEYNMLWH-DGK-VWFIDVSQSVE  173 (197)
T ss_pred             HHHHHHHHhCCeecCCCCHHHEEEE-CCc-EEEEECCCcee
Confidence            346666 899999999999999997 456 99999997654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.65  E-value=6.6e-05  Score=52.06  Aligned_cols=39  Identities=31%  Similarity=0.416  Sum_probs=34.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC---CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG---SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~---~~~kl~dfg~a~~  112 (127)
                      ..+.-||..+++|+|+++.|||++.+.   . +.++||+.++.
T Consensus       129 ~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~-~~lIDld~~~~  170 (206)
T PF06293_consen  129 RLIAKLHDAGIYHGDLNPSNILVDPDDGQYR-FYLIDLDRMRF  170 (206)
T ss_pred             HHHHHHHHCcCCCCCCCcccEEEeCCCCcee-EEEEcchhcee
Confidence            347889999999999999999999887   5 89999997776

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.56  E-value=9.9e-05  Score=53.40  Aligned_cols=38  Identities=24%  Similarity=0.287  Sum_probs=32.6

Q ss_pred             HHHHHHHCCcEecCCCCCCEEEec-------CCCeEEEEeccccee
Q psy7471          74 CLTFLHRHGVVYRDLKLDNILLDA-------GGSLLKLADFGRCAR  112 (127)
Q Consensus        74 al~~lH~~~iih~dlk~~nil~~~-------~~~~~kl~dfg~a~~  112 (127)
                      .+.-||..|++|+|+++.|||++.       ... +.++||+.++.
T Consensus       150 ~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~-~~LIDl~r~~~  194 (268)
T PRK15123        150 MVRDMHAAGINHRDCYICHFLLHLPFPGREEDLK-LSVIDLHRAQI  194 (268)
T ss_pred             HHHHHHHCcCccCCCChhhEEEeccccCCCCCce-EEEEECCcccc
Confidence            478899999999999999999985       234 89999998754

>KOG0590|consensus

Probab=97.38  E-value=2.5e-05  Score=62.29  Aligned_cols=39  Identities=49%  Similarity=0.807  Sum_probs=36.5

Q ss_pred             HHHHHHH-HCCcEecCCCCCCEEEecCC-CeEEEEeccccee
Q psy7471          73 ACLTFLH-RHGVVYRDLKLDNILLDAGG-SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH-~~~iih~dlk~~nil~~~~~-~~~kl~dfg~a~~  112 (127)
                      .++.|+| ..++.|+|++|+|.+++..+ . +++.||++|..
T Consensus       134 s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~-l~~~df~~At~  174 (601)
T KOG0590|consen  134 SGLSYLHPENGVTHRDIKPSNSLLDESGSA-LKIADFGLATA  174 (601)
T ss_pred             cCccccCcccccccCCCCCccchhccCCCc-ccCCCchhhcc
Confidence            6799999 89999999999999999888 7 99999999887

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.35  E-value=0.00031  Score=48.32  Aligned_cols=35  Identities=40%  Similarity=0.697  Sum_probs=28.0

Q ss_pred             HHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          76 TFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        76 ~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..+|..+++|.||.+.||+++.. . +.++||+-+-.
T Consensus       121 ~~~~~~givHGDLs~~NIlv~~~-~-~~iIDf~qav~  155 (188)
T PF01163_consen  121 KMLHKAGIVHGDLSEYNILVDDG-K-VYIIDFGQAVD  155 (188)
T ss_dssp             HHHHCTTEEESS-STTSEEEETT-C-EEE--GTTEEE
T ss_pred             HHHHhcCceecCCChhhEEeecc-e-EEEEecCccee
Confidence            45689999999999999999977 6 99999998766

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0601|consensus

Probab=97.28  E-value=0.0002  Score=56.02  Aligned_cols=41  Identities=37%  Similarity=0.503  Sum_probs=36.7

Q ss_pred             HHHHHHHCCcEecCCCCCCEEEecC-CCeEEEEecccceecCc
Q psy7471          74 CLTFLHRHGVVYRDLKLDNILLDAG-GSLLKLADFGRCARKKI  115 (127)
Q Consensus        74 al~~lH~~~iih~dlk~~nil~~~~-~~~~kl~dfg~a~~~~~  115 (127)
                      |+.++|..+++|.|++|+|+++..+ .. +++.||++......
T Consensus       234 al~~~hs~~~~~~~~kp~~i~~~~~~~s-~~~~df~~v~~i~~  275 (524)
T KOG0601|consen  234 ALSHLHSNNIVHDDLKPANIFTTSDWTS-CKLTDFGLVSKISD  275 (524)
T ss_pred             cccccCCCcccccccchhheecccccce-eecCCcceeEEccC
Confidence            8999999999999999999999988 66 99999998877433

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=97.05  E-value=0.0013  Score=43.65  Aligned_cols=41  Identities=46%  Similarity=0.442  Sum_probs=32.3

Q ss_pred             HHHHHHHhhcchhHHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec
Q psy7471          60 ILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK  113 (127)
Q Consensus        60 ~~~~~~~~~~~g~~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~  113 (127)
                      -..++.+.+.    |+.|||+++      ||.||+++.++. +++  ||+++..
T Consensus        19 ~~~i~~qi~~----~L~~lH~~~------kp~Nil~~~~~~-~~~--fG~~~~~   59 (176)
T smart00750       19 IWAVCLQCLR----ALRELHRQA------KSGNILLTWDGL-LKL--DGSVAFK   59 (176)
T ss_pred             HHHHHHHHHH----HHHHHHhcC------CcccEeEcCccc-eee--ccceEee
Confidence            3444555554    499999998      999999999888 888  9998863

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.88  E-value=0.0016  Score=44.67  Aligned_cols=81  Identities=17%  Similarity=0.201  Sum_probs=53.6

Q ss_pred             eEEEEEeceeCCceEEEEEEcc------------cccCch---------------------hHHHHHHHhhcchh-----
Q psy7471          31 FHFIKVLGKGSFGKELFGHYRS------------ITNDTN---------------------SILRFLLLLLCAGD-----   72 (127)
Q Consensus        31 ~~~~~~lg~G~fg~V~~~~~~~------------~~~~~~---------------------~~~~~~~~~~~~g~-----   72 (127)
                      .+..+.|++|.++.||+|.|.+            .....+                     .+..+.|+|+.|..     
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~L~~~~  103 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRPLGKLE  103 (201)
T ss_pred             hhhhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcchhhhh
Confidence            3567789999999999999986            000011                     22233355655532     


Q ss_pred             ---------HHH--HH-HHHCCcEecCCC-CCCEEEecCCCeEEEEeccccee
Q psy7471          73 ---------ACL--TF-LHRHGVVYRDLK-LDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ---------~al--~~-lH~~~iih~dlk-~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                               ..+  .| |-..||-|.++. |...++..+.. +-|+||..|..
T Consensus       104 ~~~~rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~-~~iIDFd~At~  155 (201)
T COG2112         104 IGGDRKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRD-VYIIDFDSATF  155 (201)
T ss_pred             hcccHHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCc-EEEEEccchhh
Confidence                     111  22 445699999998 66677776667 99999998885

>KOG0601|consensus

Probab=96.71  E-value=0.00063  Score=53.29  Aligned_cols=38  Identities=34%  Similarity=0.402  Sum_probs=33.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecC-CCeEEEEecccce
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAG-GSLLKLADFGRCA  111 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~-~~~~kl~dfg~a~  111 (127)
                      .++.++|.+.++|+|++|.||++..+ +. .++.||++..
T Consensus       377 ~~l~~i~s~~~~~~d~~psni~i~~~~~~-~~~~~~~~~t  415 (524)
T KOG0601|consen  377 TALNVIHSKLFVHLDVKPSNILISNDGFF-SKLGDFGCWT  415 (524)
T ss_pred             hccccccchhhhcccccccceeeccchhh-hhcccccccc
Confidence            57789999999999999999999986 55 7888888765

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.38  E-value=0.0072  Score=42.73  Aligned_cols=38  Identities=21%  Similarity=0.334  Sum_probs=32.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.-+|..|+.|.|..|.|+++. ++. ++++||+..+.
T Consensus       146 ~~ikqlH~~G~~HGD~hpgNFlv~-~~~-i~iID~~~k~~  183 (229)
T PF06176_consen  146 EAIKQLHKHGFYHGDPHPGNFLVS-NNG-IRIIDTQGKRM  183 (229)
T ss_pred             HHHHHHHHcCCccCCCCcCcEEEE-CCc-EEEEECccccc
Confidence            457889999999999999999988 455 89999987654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1033|consensus

Probab=96.33  E-value=0.00074  Score=52.49  Aligned_cols=36  Identities=33%  Similarity=0.664  Sum_probs=31.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|++|   ++.+|+|+||.||+...+.. +||.|||+.-.
T Consensus       370 ~~~~y---k~~ihrdlkp~nif~~~d~q-~kIgDFgl~ts  405 (516)
T KOG1033|consen  370 PAVEY---KGLIHRDLKPSNIFFSDDDQ-LKIGDFGLVTS  405 (516)
T ss_pred             cchhh---ccchhhhccccccccccchh-hhhhhhhheee
Confidence            45556   88999999999999998888 99999998654

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.26  E-value=0.016  Score=42.36  Aligned_cols=30  Identities=33%  Similarity=0.478  Sum_probs=27.2

Q ss_pred             HHHCCcEecCCCCCCEEEecCCCeEEEEecc
Q psy7471          78 LHRHGVVYRDLKLDNILLDAGGSLLKLADFG  108 (127)
Q Consensus        78 lH~~~iih~dlk~~nil~~~~~~~~kl~dfg  108 (127)
                      .-..|++|.|+.+=||+++.++. +.++||-
T Consensus       218 ~~~~GiVHGDlSefNIlV~~dg~-~~vIDwP  247 (304)
T COG0478         218 AYRRGIVHGDLSEFNILVTEDGD-IVVIDWP  247 (304)
T ss_pred             HHHcCccccCCchheEEEecCCC-EEEEeCc
Confidence            33789999999999999999999 9999984

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.60  E-value=0.013  Score=40.09  Aligned_cols=31  Identities=23%  Similarity=0.380  Sum_probs=26.5

Q ss_pred             CCcEecCCCCCCEEEec--CCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDA--GGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~--~~~~~kl~dfg~a~~  112 (127)
                      ..++|+|+.|.||+++.  ... +.++||+.+..
T Consensus       174 ~~l~HgD~~~~Nil~~~~~~~~-~~iID~e~~~~  206 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPDEPRV-VAVLDWELATL  206 (223)
T ss_pred             cEEEECCCCcccEEEcCCCCcE-EEEEecccccc
Confidence            46899999999999998  455 79999988765

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK09902 hypothetical protein; Provisional

Probab=95.56  E-value=0.019  Score=40.38  Aligned_cols=40  Identities=13%  Similarity=0.132  Sum_probs=33.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCC-eEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGS-LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~-~~kl~dfg~a~~  112 (127)
                      ..+.-||..++.|+|+-+.||+++..+. .+.++||--++.
T Consensus       139 ~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        139 LAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            4588999999999999999999984443 389999977665

>KOG1023|consensus

Probab=95.54  E-value=0.028  Score=43.97  Aligned_cols=49  Identities=35%  Similarity=0.410  Sum_probs=39.3

Q ss_pred             hHHHHHHHhhcchhHHHHHHHHCCc-EecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          59 SILRFLLLLLCAGDACLTFLHRHGV-VYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        59 ~~~~~~~~~~~~g~~al~~lH~~~i-ih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ....++.+...    |+.|+|.-.| .|..+++.|++++..-. +|++|||+...
T Consensus        49 F~~s~~rdi~~----Gl~ylh~s~i~~hg~l~s~nClvd~~w~-lklt~~Gl~~~   98 (484)
T KOG1023|consen   49 FILSFIRDISK----GLAYLHNSPIGYHGALKSSNCLVDSRWV-LKLTDFGLNSL   98 (484)
T ss_pred             HHHHHHHHHHH----HHHHHhcCcceeeeeeccccceeeeeEE-EEechhhhccc
Confidence            44445555554    4999998765 89999999999998887 99999998664

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=94.96  E-value=0.67  Score=32.45  Aligned_cols=25  Identities=28%  Similarity=0.444  Sum_probs=22.9

Q ss_pred             CCCeEEEEEeceeCC-ceEEEEEEcc
Q psy7471          28 LEDFHFIKVLGKGSF-GKELFGHYRS   52 (127)
Q Consensus        28 ~~~~~~~~~lg~G~f-g~V~~~~~~~   52 (127)
                      .++++.++.||.|.- |.||+++..+
T Consensus        36 ~~~I~flefLg~g~~~~~V~kv~I~g   61 (207)
T PF13095_consen   36 GDDIEFLEFLGHGSHDGYVFKVEIDG   61 (207)
T ss_pred             CCcEeeeeecCCCCceeEEEEEEECC
Confidence            388999999999999 9999998877

>PRK05231 homoserine kinase; Provisional

Probab=94.94  E-value=0.024  Score=41.53  Aligned_cols=31  Identities=29%  Similarity=0.385  Sum_probs=26.0

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++||+|+.|.|++++.+.. ..++||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~~~~-~~iIDf~~~~~  217 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRL-SGFIDFYFACN  217 (319)
T ss_pred             cccCCCCCCCCcEEEECCce-EEEEecccccC
Confidence            37999999999999986554 68999987754

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=94.87  E-value=0.029  Score=40.74  Aligned_cols=30  Identities=33%  Similarity=0.287  Sum_probs=26.4

Q ss_pred             CcEecCCCCCCEEEecC----CCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAG----GSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~----~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.+.||+++.+    +. +.++||..|..
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~-i~lIDwEya~~  213 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKK-LVLIDFEYASY  213 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCc-EEEEeeCCCCC
Confidence            68999999999999874    67 99999988765

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=94.86  E-value=0.035  Score=38.70  Aligned_cols=30  Identities=23%  Similarity=0.295  Sum_probs=26.4

Q ss_pred             CcEecCCCCCCEEEec-CCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDA-GGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~-~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.+.||+++. +.. +.++||..|..
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~-~~lIDwe~a~~  201 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNS-VKFIDYEYAGY  201 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCC-EEEEEcccCCc
Confidence            6899999999999997 466 99999987765

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=94.46  E-value=0.044  Score=38.45  Aligned_cols=30  Identities=27%  Similarity=0.282  Sum_probs=25.3

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|.|+.+.|++++.... ..++||+.+..
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i-~giIDw~~a~~  194 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRL-SAVIDFGCLGV  194 (235)
T ss_pred             eEEeCCCCCCcEEEECCCE-EEEEeCcccCc
Confidence            5899999999999986554 67999998765

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.32  E-value=0.035  Score=38.31  Aligned_cols=30  Identities=33%  Similarity=0.468  Sum_probs=20.8

Q ss_pred             CcEecCCCCCCEEE-ecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILL-DAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~-~~~~~~~kl~dfg~a~~  112 (127)
                      ..+|+|+.|.||++ ..++. ++++||..|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~-~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGE-VKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSC-EEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCe-EEEecHHHHhh
Confidence            68899999999999 66777 99999988776

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=94.28  E-value=0.048  Score=38.32  Aligned_cols=30  Identities=33%  Similarity=0.379  Sum_probs=26.1

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.|.|++++.... +.|+||+.+..
T Consensus       164 ~l~HgD~~~~Nil~~~~~~-~~iIDwe~a~~  193 (244)
T cd05150         164 VVTHGDACLPNIIVDPGKF-SGFIDLGRLGV  193 (244)
T ss_pred             EEECCCCCCccEEEeCCcE-EEEEEcccccc
Confidence            4899999999999998665 78999988764

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=94.19  E-value=0.037  Score=37.86  Aligned_cols=31  Identities=29%  Similarity=0.474  Sum_probs=21.2

Q ss_pred             CCcEecCCCCCCEEEe-cCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLD-AGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~-~~~~~~kl~dfg~a~~  112 (127)
                      ..++|.|+.|.||+++ .++. +.++||+.+..
T Consensus       166 ~~~~HgD~~~~Nil~~~~~~~-i~iID~e~a~~  197 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPSDGR-IGIIDFEDAGW  197 (239)
T ss_dssp             EEEE-SS-SGGGEEEESSTTE-EEE--GTT-EE
T ss_pred             cEEEEeccccccceeeeccce-eEEEecccceE
Confidence            3699999999999999 4555 68999988765

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=94.14  E-value=0.048  Score=39.85  Aligned_cols=31  Identities=32%  Similarity=0.425  Sum_probs=27.0

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+++|.|+.+.|++++.++. ..++||+.+..
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~-~~vIDfd~~~~  217 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSV-KGVIDFYFACT  217 (307)
T ss_pred             CccCCCCCCcCcEEEECCce-EEEeecccccC
Confidence            58999999999999998775 78999998754

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=94.02  E-value=0.046  Score=39.48  Aligned_cols=31  Identities=32%  Similarity=0.401  Sum_probs=26.5

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+++|+|+.|.|++++.+.. +.|+||..+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~-~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDEL-SGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCce-EEEeehhhhcC
Confidence            36999999999999998766 78999987654

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=93.96  E-value=0.13  Score=40.66  Aligned_cols=34  Identities=38%  Similarity=0.568  Sum_probs=30.4

Q ss_pred             HHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          78 LHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        78 lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +-..+..|.|..|-|+++..++. +-+.|||+...
T Consensus       281 ~~~dgffHaDpHpGNi~v~~~g~-i~~lDfGi~g~  314 (517)
T COG0661         281 LLRDGFFHADPHPGNILVRSDGR-IVLLDFGIVGR  314 (517)
T ss_pred             HHhcCccccCCCccceEEecCCc-EEEEcCcceec
Confidence            44579999999999999999999 99999998765

>KOG1235|consensus

Probab=93.36  E-value=0.047  Score=43.30  Aligned_cols=34  Identities=26%  Similarity=0.352  Sum_probs=28.3

Q ss_pred             HHHCCcEecCCCCCCEEEec----CCCeEEEEeccccee
Q psy7471          78 LHRHGVVYRDLKLDNILLDA----GGSLLKLADFGRCAR  112 (127)
Q Consensus        78 lH~~~iih~dlk~~nil~~~----~~~~~kl~dfg~a~~  112 (127)
                      +-..|.+|.|-.|-||++..    +.. +.+.|||+...
T Consensus       317 If~~GffHaDPHPGNilv~~~~~~~~~-ivllDhGl~~~  354 (538)
T KOG1235|consen  317 IFKTGFFHADPHPGNILVRPNPEGDEE-IVLLDHGLYAV  354 (538)
T ss_pred             HHhcCCccCCCCCCcEEEecCCCCCcc-EEEEccccccc
Confidence            33468999999999999994    344 99999999876

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=93.32  E-value=0.09  Score=38.12  Aligned_cols=30  Identities=30%  Similarity=0.323  Sum_probs=26.7

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      -++|.|+.|.|++.++.+. +.|+||--|..
T Consensus       154 v~cH~Dl~~~N~l~t~~~~-l~LIDWEyAg~  183 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGG-LFLIDWEYAGL  183 (269)
T ss_pred             eeecCCCCccceEEcCCCc-EEEEecccCCC
Confidence            5899999999999999888 99999976654

>KOG2137|consensus

Probab=93.11  E-value=0.067  Score=43.36  Aligned_cols=39  Identities=38%  Similarity=0.664  Sum_probs=34.9

Q ss_pred             HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|+|+. +++|+++.|+++.++..+. .|++.|+++-.
T Consensus       110 dgl~flh~sAk~VH~ni~p~~i~~na~~~-wkl~Gf~f~v~  149 (700)
T KOG2137|consen  110 DGLAFLHRSAKVVHGNIQPEAIVVNANGD-WKLAGFSFCVN  149 (700)
T ss_pred             chhhhhccCcceeecccchhheeeccCcc-eeeccchhhhc
Confidence            789999986 9999999999999999998 99999987543

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=93.08  E-value=0.11  Score=35.74  Aligned_cols=31  Identities=23%  Similarity=0.246  Sum_probs=26.2

Q ss_pred             CCcEecCCCCCCEEEecCC-----CeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGG-----SLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~-----~~~kl~dfg~a~~  112 (127)
                      ..++|+|+.+.|+++..+.     . +.++||..+..
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~-~~liDfq~~~~  155 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPED-VALIDFQLSHY  155 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccc-eEEEecccCCc
Confidence            4689999999999997543     4 89999998876

subfamily of choline kinases

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=92.96  E-value=0.11  Score=37.65  Aligned_cols=30  Identities=30%  Similarity=0.537  Sum_probs=25.5

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+++|+|+.+.|++++. +. +.++||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~-~~-i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NE-VYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeC-Cc-EEEEECccccc
Confidence            47899999999999987 56 89999986544

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PLN02236 choline kinase

Probab=92.78  E-value=0.13  Score=38.41  Aligned_cols=30  Identities=23%  Similarity=0.494  Sum_probs=25.9

Q ss_pred             CcEecCCCCCCEEEecC-CCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAG-GSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~-~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.+.||+++.. .. +.++||..+..
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~-~~lID~Eya~~  231 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRA-ITIIDYEYASY  231 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCc-EEEEeehhccc
Confidence            68999999999999864 55 99999988765

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=92.64  E-value=0.077  Score=40.23  Aligned_cols=32  Identities=31%  Similarity=0.263  Sum_probs=24.0

Q ss_pred             CCcEecCCCCCCEEEecCCC-----------------eEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGS-----------------LLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~-----------------~~kl~dfg~a~~  112 (127)
                      .+.+|.||||.|||+-+...                 +++|.||.+|+.
T Consensus       298 ~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv  346 (434)
T PF05445_consen  298 TNFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQV  346 (434)
T ss_pred             ceeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHh
Confidence            37899999999999865432                 156778887765

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PHA03111 Ser/Thr kinase; Provisional

Probab=92.42  E-value=0.056  Score=40.81  Aligned_cols=19  Identities=37%  Similarity=0.406  Sum_probs=15.9

Q ss_pred             CCcEecCCCCCCEEEecCC
Q psy7471          81 HGVVYRDLKLDNILLDAGG   99 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~   99 (127)
                      .+.+|.||||.|||+-+..
T Consensus       302 ~nF~H~DLKPdNILiFds~  320 (444)
T PHA03111        302 DNFLHVDLKPDNILIFDSD  320 (444)
T ss_pred             ceeeeccCCCCcEEEecCC
Confidence            3789999999999986554

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=92.36  E-value=0.17  Score=36.79  Aligned_cols=31  Identities=26%  Similarity=0.337  Sum_probs=25.5

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|.|+.|.|++++.++....|+||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            5899999999999997454257999998765

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PRK10271 thiK thiamine kinase; Provisional

Probab=92.01  E-value=0.2  Score=34.53  Aligned_cols=29  Identities=24%  Similarity=0.407  Sum_probs=24.2

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..+|.|+.|.|+++..++  ++++||+.+..
T Consensus        78 ~p~H~D~~~~N~~~~~~~--~~lIDwe~a~~  106 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG--LRLIDWEYAGD  106 (188)
T ss_pred             eeecCCCCCccEEEECCC--EEEEeCCcccC
Confidence            468999999999887544  78999998765

>TIGR02721 ycfN_thiK thiamine kinase

Probab=91.83  E-value=0.17  Score=35.91  Aligned_cols=29  Identities=24%  Similarity=0.383  Sum_probs=24.7

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.|.|++++.++  +.++||..+..
T Consensus       147 ~l~H~Dl~~~Nil~~~~~--~~lIDwE~a~~  175 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG--LKLIDWEYASD  175 (256)
T ss_pred             eeecCCCCcCcEEEeCCC--CEEEeccccCc
Confidence            589999999999998754  68999987765

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=91.78  E-value=0.12  Score=37.78  Aligned_cols=30  Identities=20%  Similarity=0.237  Sum_probs=26.7

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +++|+|+.+.|++++.++. +.++||..+..
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~-~~iIDfd~~~~  226 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRG-GYFINFEKASF  226 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCC-EEEEEhhhccc
Confidence            7999999999999998888 99999987654

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=91.57  E-value=0.21  Score=37.07  Aligned_cols=29  Identities=28%  Similarity=0.401  Sum_probs=25.0

Q ss_pred             cEecCCCCCCEEEecC-CCeEEEEeccccee
Q psy7471          83 VVYRDLKLDNILLDAG-GSLLKLADFGRCAR  112 (127)
Q Consensus        83 iih~dlk~~nil~~~~-~~~~kl~dfg~a~~  112 (127)
                      .+|.|+.+.||+++.. +. ++++||..|..
T Consensus       184 ~CHnDl~~~NiL~~~~~~~-l~lID~EYag~  213 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGK-LYFIDFEYGSY  213 (330)
T ss_pred             EEECCCCcccEEEeCCCCc-EEEEcccccCC
Confidence            7899999999999754 56 99999987765

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=91.25  E-value=0.21  Score=37.34  Aligned_cols=30  Identities=27%  Similarity=0.468  Sum_probs=25.6

Q ss_pred             cEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          83 VVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        83 iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +||.|+-|.|++++.....+.++||+-+..
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence            999999999999998763378999987654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=90.95  E-value=0.25  Score=34.75  Aligned_cols=29  Identities=17%  Similarity=0.337  Sum_probs=24.7

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|.|+.|.|++++..+  +.++||+.+..
T Consensus       154 ~~~HgD~~~~Nii~~~~~--~~iIDwe~a~~  182 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG--TYWIDLGDFGY  182 (226)
T ss_pred             ceEecCCCCCcEEEcCCC--cEEEechhcCc
Confidence            578999999999998655  78999987765

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0606|consensus

Probab=90.79  E-value=0.16  Score=43.37  Aligned_cols=39  Identities=36%  Similarity=0.479  Sum_probs=34.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+.++||...++|+|++|.|.+...++. .++.||++.+.
T Consensus       915 qs~e~L~s~~r~h~~~~p~~~l~~~~gh-~~l~~~~t~~~  953 (1205)
T KOG0606|consen  915 QSLESLHSSLRKHRDLKPDSLLIAYDGH-RPLTDFGTLSK  953 (1205)
T ss_pred             hhhhccccchhhcccccccchhhcccCC-cccCccccccc
Confidence            6788999999999999999999999998 99999985443

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=90.01  E-value=0.27  Score=37.74  Aligned_cols=29  Identities=41%  Similarity=0.586  Sum_probs=27.0

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..-||++...||+++ .+. +.|+||.++|-
T Consensus       342 ~fehrnlt~~niLId-~Gn-vtLIDfklsRl  370 (488)
T COG5072         342 PFEHRNLTLDNILID-EGN-VTLIDFKLSRL  370 (488)
T ss_pred             Ccccccccccceeee-cCc-eEEEEeeeeec
Confidence            678999999999999 888 99999999986

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=89.33  E-value=0.46  Score=35.44  Aligned_cols=30  Identities=20%  Similarity=0.329  Sum_probs=27.4

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|.|+.+.|++++.... +-+.||+++.-
T Consensus       199 ~lvHGD~~~gNlii~~~~~-~gVlDwe~~~l  228 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRP-TGVLDWELATL  228 (321)
T ss_pred             eeeeCCcccCCEEEeCCCe-eEEEecccccc
Confidence            5899999999999999988 99999998765

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=88.69  E-value=0.45  Score=34.31  Aligned_cols=36  Identities=33%  Similarity=0.249  Sum_probs=30.3

Q ss_pred             HHHHHHHHC--CcEecCCCCCCEEEecCCCeEEEEeccc
Q psy7471          73 ACLTFLHRH--GVVYRDLKLDNILLDAGGSLLKLADFGR  109 (127)
Q Consensus        73 ~al~~lH~~--~iih~dlk~~nil~~~~~~~~kl~dfg~  109 (127)
                      .++.-.|+.  +.+|.|..|+||+-|..+. +||.|-+.
T Consensus       152 ~~L~~fH~~~~~~lHGD~np~NiM~D~~G~-lKlVDP~~  189 (308)
T PF07387_consen  152 KDLMDFHSENQHCLHGDCNPDNIMCDKFGY-LKLVDPVC  189 (308)
T ss_pred             HHHHHhhccCCCeecCCCChhheeecCCCC-EEecChhh
Confidence            456677843  7999999999999999999 99999653

The function of this family is unknown.

>PRK06148 hypothetical protein; Provisional

Probab=87.21  E-value=0.7  Score=39.61  Aligned_cols=32  Identities=34%  Similarity=0.449  Sum_probs=25.8

Q ss_pred             CCcEecCCCCCCEEEecCC--CeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGG--SLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~--~~~kl~dfg~a~~  112 (127)
                      ..+||.|+.+.||+++.+.  ...-|+|||-+-.
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            4799999999999999774  4246999997654

>KOG2268|consensus

Probab=86.51  E-value=2.6  Score=32.28  Aligned_cols=33  Identities=24%  Similarity=0.432  Sum_probs=28.7

Q ss_pred             HHHHHHCCcEecCCCCCCEEEecCCCeEEEEecc
Q psy7471          75 LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG  108 (127)
Q Consensus        75 l~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg  108 (127)
                      +--|..+|+||.|..-=||+++.+.. ++++||-
T Consensus       215 Iv~la~~GlIHgDFNEFNimv~dd~~-i~vIDFP  247 (465)
T KOG2268|consen  215 IVRLANHGLIHGDFNEFNIMVKDDDK-IVVIDFP  247 (465)
T ss_pred             HHHHHHcCceecccchheeEEecCCC-EEEeech
Confidence            34577889999999999999998888 9999983

>KOG1243|consensus

Probab=86.38  E-value=2.3  Score=34.78  Aligned_cols=39  Identities=23%  Similarity=0.448  Sum_probs=34.6

Q ss_pred             HHHHHHH-HCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLH-RHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH-~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.||| .++++|.++....++++..+. -||.+|-++..
T Consensus       115 ~AL~FL~~d~~lvHgNv~~~SVfVn~~Ge-WkLggle~v~~  154 (690)
T KOG1243|consen  115 AALSFLNDDCNLVHGNVCKDSVFVNESGE-WKLGGLELVSK  154 (690)
T ss_pred             HHHHHHhccCCeeeccEeeeeEEEcCCCc-EEEeeeEEEec
Confidence            7899998 569999999999999999999 99999877644

>PRK11768 serine/threonine protein kinase; Provisional

Probab=85.50  E-value=0.63  Score=34.48  Aligned_cols=29  Identities=17%  Similarity=0.098  Sum_probs=24.2

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++||.|+.+.|++++ + . +.++||+-+..
T Consensus       196 ~~liHgD~h~~NvL~~-d-~-~~iIDFDd~~~  224 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-G-PHFVDLDDARM  224 (325)
T ss_pred             ccceecCCCchhcccc-C-C-cEEEeCCCCCC
Confidence            3689999999999995 3 5 78999987665

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=85.08  E-value=0.94  Score=34.86  Aligned_cols=30  Identities=17%  Similarity=0.154  Sum_probs=25.2

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..++|+|+.+.||++..+ . ++++||-++..
T Consensus       223 ~~l~HgDl~~gni~~~~~-~-~~viD~E~a~~  252 (401)
T PRK09550        223 EALLHGDLHTGSIFVTEE-E-TKVIDPEFAFY  252 (401)
T ss_pred             CceeeccCCcccEEeeCC-C-cEEEecccccc
Confidence            468999999999999765 4 89999977654

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=84.47  E-value=2.2  Score=29.64  Aligned_cols=32  Identities=34%  Similarity=0.483  Sum_probs=26.0

Q ss_pred             HHHHHHCCcEecCCCCCCEEEecCC--C-eEEEEe
Q psy7471          75 LTFLHRHGVVYRDLKLDNILLDAGG--S-LLKLAD  106 (127)
Q Consensus        75 l~~lH~~~iih~dlk~~nil~~~~~--~-~~kl~d  106 (127)
                      ..||-...|+.+|++|.||++....  . .+.|+|
T Consensus       131 ~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlID  165 (199)
T PF10707_consen  131 KRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLID  165 (199)
T ss_pred             HHHHHHcCCeecCCCcccEEEEecCCCceEEEEEe
Confidence            4678889999999999999997554  2 377787

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG0195|consensus

Probab=84.42  E-value=0.28  Score=36.23  Aligned_cols=30  Identities=13%  Similarity=0.297  Sum_probs=26.1

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS   52 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~   52 (127)
                      -..+++.++.+..+|.+..-|+.|+|+|++
T Consensus       184 ~~gid~~~lnl~tkl~e~hsgelwrgrwqg  213 (448)
T KOG0195|consen  184 YTGIDVSSLNLITKLAESHSGELWRGRWQG  213 (448)
T ss_pred             ccCcchhhhhhhhhhccCCCcccccccccC
Confidence            345777888889999999999999999987

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=84.36  E-value=0.63  Score=33.61  Aligned_cols=30  Identities=23%  Similarity=0.247  Sum_probs=25.3

Q ss_pred             CcEecCCCCCCEEEecCC-----CeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGG-----SLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~-----~~~kl~dfg~a~~  112 (127)
                      -++|+|+++.||++..+.     . +.++||-+++.
T Consensus       216 vl~HGD~w~nNilf~~~~~g~~~~-~~liDfQ~~~~  250 (294)
T PF02958_consen  216 VLCHGDFWTNNILFKYDDDGKPID-VVLIDFQLARY  250 (294)
T ss_pred             EEEcCccCHHhEeEcccccccccc-ceeeccccccC
Confidence            589999999999997542     4 89999988776

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PRK06149 hypothetical protein; Provisional

Probab=84.03  E-value=1  Score=38.50  Aligned_cols=32  Identities=25%  Similarity=0.256  Sum_probs=25.2

Q ss_pred             CCcEecCCCCCCEEEecCC----CeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGG----SLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~----~~~kl~dfg~a~~  112 (127)
                      .++||.|+.+.|++++.+.    ....|+|||-+-.
T Consensus       208 ~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~  243 (972)
T PRK06149        208 LQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVR  243 (972)
T ss_pred             ccccCCCCCcccEEEcCCCCCCcceeEEEEcccchh
Confidence            5899999999999998653    2247999996543

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=82.99  E-value=2.1  Score=31.12  Aligned_cols=30  Identities=30%  Similarity=0.408  Sum_probs=26.1

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+++|.||..=|||+. ++. +.++||+=|-.
T Consensus       186 a~LVHgDLSEyNiL~~-~~~-p~iID~~QaV~  215 (268)
T COG1718         186 AGLVHGDLSEYNILVH-DGE-PYIIDVSQAVT  215 (268)
T ss_pred             cCcccccchhhheEEE-CCe-EEEEECccccc
Confidence            7999999999999999 666 99999986543

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=82.95  E-value=6.3  Score=26.95  Aligned_cols=47  Identities=28%  Similarity=0.270  Sum_probs=34.1

Q ss_pred             hhHHHHHHHhhcchhHHHHHHHH---CCcEecCCCCCCEEEecCCCeEEEEeccc
Q psy7471          58 NSILRFLLLLLCAGDACLTFLHR---HGVVYRDLKLDNILLDAGGSLLKLADFGR  109 (127)
Q Consensus        58 ~~~~~~~~~~~~~g~~al~~lH~---~~iih~dlk~~nil~~~~~~~~kl~dfg~  109 (127)
                      .....+-.+++.-    +.+++.   ..+.-.|++++|+.+.+++. +|++|...
T Consensus        59 ~~R~~iA~~lL~~----l~~l~~~~~~~~~lcDv~~~nfgv~~~~~-lk~iDld~  108 (188)
T PF12260_consen   59 EQRAKIALQLLEL----LEELDHGPLGFFYLCDVSPDNFGVNDDGR-LKLIDLDD  108 (188)
T ss_pred             HHHHHHHHHHHHH----HHHHhcCCCCcEEEeecchHHeEEeCCCc-EEEEechh
Confidence            3444444444433    566665   35888999999999998888 99999864

Proteins in this uncharacterised family are described as transmembrane proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	127
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		1e-07
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		1e-07
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-07
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-07
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		6e-07
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		6e-07
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		6e-07
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		7e-07
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		8e-07
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-06
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		4e-06
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		6e-06
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		7e-06
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-05
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-05
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-05
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-05
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-05
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-05
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-05
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-05
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-05
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-05
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-05
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-05
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-05
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		2e-05
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		3e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-05
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-05
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-05
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		4e-05
4ae6_A	343	Structure And Function Of The Human Sperm-specific		4e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		4e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		4e-05
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-05
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-05
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		4e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-05
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		4e-05
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		4e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-05
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		4e-05
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-05
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		4e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		4e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		4e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-05
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		4e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		4e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-05
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		4e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		4e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		4e-05
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		4e-05
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		5e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		5e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		5e-05
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		5e-05
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		5e-05
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		6e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		6e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		6e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		6e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		6e-05
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		7e-05
4ae9_A	343	Structure And Function Of The Human Sperm-specific		7e-05
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		7e-05
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		8e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		8e-05
4fie_A	423	Full-Length Human Pak4 Length = 423		8e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		8e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		8e-05
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		8e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		8e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		8e-05
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		8e-05
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		9e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		9e-05
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		9e-05
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		9e-05
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		9e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		9e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-04
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-04
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		1e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		1e-04
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-04
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		1e-04
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		1e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-04
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-04
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-04
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		2e-04
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		2e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		3e-04
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		3e-04
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		3e-04
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		3e-04
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		3e-04
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		3e-04
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		3e-04
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		3e-04
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		3e-04
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		3e-04
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		3e-04
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		4e-04
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		4e-04
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		4e-04
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		4e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-04
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-04
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		4e-04
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		4e-04
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		4e-04
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		4e-04
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		4e-04
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-04
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-04
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		4e-04
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-04
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		4e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		4e-04
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		4e-04
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		5e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		6e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		6e-04
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		7e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		7e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		8e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		8e-04
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		8e-04
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		9e-04

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/36 (69%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FLH  G+VYRDLKLDNILLD  G  +K+ADFG C
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGH-IKIADFGMC 166

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK-----KIKLFC 119
           L FLH  G+VYRDLKLDNILLD  G  +K+ADFG C        K   FC
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNXFC 179

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FLH+ G++YRDLKLDN++LD+ G  +K+ADFG C
Sbjct: 133 LFFLHKRGIIYRDLKLDNVMLDSEGH-IKIADFGMC 167

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/36 (58%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L +LH  G++YRDLKLDN+LLD+ G  +KL D+G C
Sbjct: 166 LNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMC 200

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK-----KIKLFC 119
           L FL   G++YRDLKLDN++LD+ G  +K+ADFG C          K FC
Sbjct: 455 LFFLQSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFC 503

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
            L +LH  G++YRDLKLDN+LLD+ G  +KL D+G C
Sbjct: 133 ALNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMC 168

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
            L +LH  G++YRDLKLDN+LLD+ G  +KL D+G C
Sbjct: 118 ALNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMC 153

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
            L +LH  G++YRDLKLDN+LLD+ G  +KL D+G C
Sbjct: 122 ALNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMC 157

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           + L FLH  G++YRDLKLDN+LLD  G   KLADFG C
Sbjct: 135 SALMFLHDKGIIYRDLKLDNVLLDHEGH-CKLADFGMC 171

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK-----KIKLFC 119
           L FL   G++YRDLKLDN++LD+ G  +K+ADFG C          K FC
Sbjct: 134 LFFLQSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFC 182

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF   R      N + +F     C     L +LH   ++YRDLK +NILLD  G  +
Sbjct: 90  GGELFSLLRKSQRFPNPVAKFYAAEVCL---ALEYLHSKDIIYRDLKPENILLDKNGH-I 145
Query: 103 KLADFG 108
           K+ DFG
Sbjct: 146 KITDFG 151

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +K+ADFG   R K
Sbjct: 179 YIKVADFGFAKRVK 192

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 126 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +K+ADFG   R K
Sbjct: 180 YIKVADFGFAKRVK 193

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L FLH + V++RD+K DNILL   GS +KL DFG CA+
Sbjct: 129 ALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ 166

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L FLH + V++RD+K DNILL   GS +KL DFG CA+
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ 165

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L FLH + V++RD+K DNILL   GS +KL DFG CA+
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ 165

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L FLH + V++RD+K DNILL   GS +KL DFG CA+
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ 165

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF H       T    RF      +    L +LH   VVYRD+KL+N++LD  G  +
Sbjct: 94  GGELFFHLSRERVFTEERARFYGAEIVS---ALEYLHSRDVVYRDIKLENLMLDKDGH-I 149
Query: 103 KLADFGRCAR-----KKIKLFC 119
           K+ DFG C         +K FC
Sbjct: 150 KITDFGLCKEGISDGATMKXFC 171

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF H       T    RF      +    L +LH   VVYRD+KL+N++LD  G  +
Sbjct: 89  GGELFFHLSRERVFTEERARFYGAEIVS---ALEYLHSRDVVYRDIKLENLMLDKDGH-I 144
Query: 103 KLADFGRCAR-----KKIKLFC 119
           K+ DFG C         +K FC
Sbjct: 145 KITDFGLCKEGISDGATMKXFC 166

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L++LH  GV++RD+K D+ILL + G  +KL+DFG CA+
Sbjct: 153 ALSYLHNQGVIHRDIKSDSILLTSDGR-IKLSDFGFCAQ 190

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G ++F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGDMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +K+ADFG   R K
Sbjct: 179 YIKVADFGFAKRVK 192

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G ++F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGDMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +K+ADFG   R K
Sbjct: 179 YIKVADFGFAKRVK 192

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF H       T    RF      +    L +LH   VVYRD+KL+N++LD  G  +
Sbjct: 92  GGELFFHLSRERVFTEERARFYGAEIVS---ALEYLHSRDVVYRDIKLENLMLDKDGH-I 147
Query: 103 KLADFGRCAR-----KKIKLFC 119
           K+ DFG C         +K FC
Sbjct: 148 KITDFGLCKEGISDGATMKTFC 169

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF H       T    RF      +    L +LH   VVYRD+KL+N++LD  G  +
Sbjct: 89  GGELFFHLSRERVFTEERARFYGAEIVS---ALEYLHSRDVVYRDIKLENLMLDKDGH-I 144
Query: 103 KLADFGRCAR-----KKIKLFC 119
           K+ DFG C         +K FC
Sbjct: 145 KITDFGLCKEGISDGATMKXFC 166

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF H       T    RF      +    L +LH   VVYRD+KL+N++LD  G  +
Sbjct: 89  GGELFFHLSRERVFTEERARFYGAEIVS---ALEYLHSRDVVYRDIKLENLMLDKDGH-I 144
Query: 103 KLADFGRCAR-----KKIKLFC 119
           K+ DFG C         +K FC
Sbjct: 145 KITDFGLCKEGISDGATMKTFC 166

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKL 126
           L FLH + +V+RDLK +NIL+ +GG+ +KLADFG       ++  D ++V L
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGT-VKLADFGLARIYSYQMALDPVVVTL 175

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF H       T    RF      +    L +LH   VVYRD+KL+N++LD  G  +
Sbjct: 89  GGELFFHLSRERVFTEERARFYGAEIVS---ALEYLHSRDVVYRDIKLENLMLDKDGH-I 144
Query: 103 KLADFGRCAR-----KKIKLFC 119
           K+ DFG C         +K FC
Sbjct: 145 KITDFGLCKEGISDGATMKXFC 166

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF H       T    RF      +    L +LH   VVYRD+KL+N++LD  G  +
Sbjct: 89  GGELFFHLSRERVFTEERARFYGAEIVS---ALEYLHSRDVVYRDIKLENLMLDKDGH-I 144
Query: 103 KLADFGRCAR-----KKIKLFC 119
           K+ DFG C         +K FC
Sbjct: 145 KITDFGLCKEGISDGATMKTFC 166

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+++D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +K+ DFG   R K
Sbjct: 179 YIKVTDFGLAKRVK 192

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+++D  G 
Sbjct: 126 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +K+ DFG   R K
Sbjct: 180 YIKVTDFGFAKRVK 193

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+++D  G 
Sbjct: 126 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +K+ DFG   R K
Sbjct: 180 YIKVTDFGFAKRVK 193

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+++D  G 
Sbjct: 126 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +K+ DFG   R K
Sbjct: 180 YIKVTDFGFAKRVK 193

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+++D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +K+ DFG   R K
Sbjct: 179 YIKVTDFGFAKRVK 192

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +LH+H +++RDLK +N+LLD  G +LKLADFG
Sbjct: 125 LEYLHQHWILHRDLKPNNLLLDENG-VLKLADFG 157

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 118 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 171
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 172 YIQVTDFGFAKRVK 185

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 126 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 180 YIQVTDFGFAKRVK 193

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 126 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 180 YIQVTDFGFAKRVK 193

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 111 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 164
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 165 YIQVTDFGFAKRVK 178

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 126 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 180 YIQVTDFGFAKRVK 193

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 112 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQG- 165
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 166 YIQVTDFGFAKRVK 179

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 126 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 180 YIQVTDFGFAKRVK 193

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 126 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 180 YIQVTDFGFAKRVK 193

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 126 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 180 YIQVTDFGFAKRVK 193

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 146 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 199
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 200 YIQVTDFGFAKRVK 213

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 78  LHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           +HR G V+RD+K DNILLD  G  ++LADFG C +
Sbjct: 178 VHRLGYVHRDIKPDNILLDRCGH-IRLADFGSCLK 211

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L FLH + V++R++K DNILL   GS +KL DFG CA+
Sbjct: 129 ALEFLHSNQVIHRNIKSDNILLGMDGS-VKLTDFGFCAQ 166

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 146 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 199
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 200 YIQVTDFGFAKRVK 213

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           + L +LH   +VYRDLK +NILLD+ G ++ L DFG C
Sbjct: 150 SALGYLHSLNIVYRDLKPENILLDSQGHIV-LTDFGLC 186

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+++D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGLAKRVK 192

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+++D  G 
Sbjct: 126 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +K+ DFG   R K
Sbjct: 180 YIKVTDFGFAKRVK 193

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+++D  G 
Sbjct: 125 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +K+ DFG   R K
Sbjct: 179 YIKVTDFGFAKRVK 192

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFAEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+++D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 118 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 171
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 172 YIQVTDFGFAKRVK 185

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I   +    RF      A    LTF  LH   ++YRDLK +N+++D  G 
Sbjct: 125 GGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L  +H  G+++RD+K DN+LLD  G  LKLADFG C +
Sbjct: 187 LDAIHSMGLIHRDVKPDNMLLDKHGH-LKLADFGTCMK 223

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L+ LH  GV++RD+K D+ILL   G  +KL+DFG CA+
Sbjct: 260 LSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQ 296

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 120 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 173
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 174 YIQVTDFGFAKRVK 187

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 126 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 179
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 180 YIQVTDFGFAKRVK 193

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR--KKIKLFCD 120
           L  +H  G ++RD+K DN+LLD  G  LKLADFG C +  K+  + CD
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCD 227

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            L  LH+ G++YRD+KL+NILLD+ G ++ L DFG
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVV-LTDFG 204

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 146 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 199
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 200 YIQVTDFGFAKRVK 213

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L +LH  GV++RD+K D+ILL   G  +KL+DFG CA+
Sbjct: 153 ALAYLHAQGVIHRDIKSDSILLTLDGR-VKLSDFGFCAQ 190

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR--KKIKLFCD 120
           L  +H  G ++RD+K DN+LLD  G  LKLADFG C +  K+  + CD
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCD 232

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR--KKIKLFCD 120
           L  +H  G ++RD+K DN+LLD  G  LKLADFG C +  K+  + CD
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCD 232

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 43  GKELFGHYRSITNDTNSILRFXXXXXCAGDACLTF--LHRHGVVYRDLKLDNILLDAGGS 100
           G E+F H R I        RF      A    LTF  LH   ++YRDLK +N+L+D  G 
Sbjct: 125 GGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 101 LLKLADFGRCARKK 114
            +++ DFG   R K
Sbjct: 179 YIQVTDFGFAKRVK 192

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L FLH H VV+RDLK  NIL+ + G  +KLADFG
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFG 165

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L FLH H VV+RDLK  NIL+ + G  +KLADFG
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFG 165

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 73  ACLTFLH-RHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           + L +LH    VVYRDLKL+N++LD  G  +K+ DFG C         +K FC
Sbjct: 259 SALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFC 310

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 29/38 (76%), Gaps = 2/38 (5%)
Query: 76  TFLHRHGVVYRDLKLDNILLDAGG--SLLKLADFGRCA 111
           T+LH+H +V+RDLK +N+LL++    +L+K+ DFG  A
Sbjct: 135 TYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA 172

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L FLH H VV+RDLK  NIL+ + G  +KLADFG
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFG 165

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 73  ACLTFLH-RHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           + L +LH    VVYRDLKL+N++LD  G  +K+ DFG C         +K FC
Sbjct: 262 SALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFC 313

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 10/69 (14%)
Query: 43  GKELFGHY---RSITNDTNSILRFXXXXXCAGDACLTFLHRHGVVYRDLKLDNILLDAGG 99
           G ELF +    + +T D     RF     CA + C    HRH +V+RDLK +N+LLD   
Sbjct: 92  GGELFDYIVEKKRMTEDEGR--RFFQQIICAIEYC----HRHKIVHRDLKPENLLLDDNL 145
Query: 100 SLLKLADFG 108
           + +K+ADFG
Sbjct: 146 N-VKIADFG 153

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLLIVKL 126
           L FLH + +V+RDLK +NIL+ +GG+ +KLADFG       ++    ++V L
Sbjct: 133 LDFLHANCIVHRDLKPENILVTSGGT-VKLADFGLARIYSYQMALTPVVVTL 183

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG--RCARKKIKLF 118
           L FLH + +V+RDLK +NIL+ +GG+ +KLADFG  R    ++ LF
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGT-VKLADFGLARIYSYQMALF 169

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/48 (43%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDA--GGSLLKLADFGRCA----RKKIK 116
           +T+LH+H +V+RDLK +N+LL++    +L+K+ DFG  A    +KK+K
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK 196

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L FLH + +V+RDLK +NIL+ +GG+ +KLADFG
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGT-VKLADFG 157

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L+ LH  GV++RD+K D+ILL   G  +KL+DFG CA+
Sbjct: 182 ALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQ 219

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L+ LH  GV++RD+K D+ILL   G  +KL+DFG CA+
Sbjct: 137 ALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQ 174

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L+ LH  GV++RD+K D+ILL   G  +KL+DFG CA+
Sbjct: 139 ALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQ 176

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
            L  LH+ G++YRDLK +NI+L+  G  +KL DFG C
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLC 168

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
            L  LH+ G++YRDLK +NI+L+  G  +KL DFG C
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLC 168

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L+ LH  GV++RD+K D+ILL   G  +KL+DFG CA+
Sbjct: 128 ALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQ 165

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
            L+ LH  GV++RD+K D+ILL   G  +KL+DFG CA+
Sbjct: 132 ALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQ 169

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 29/38 (76%), Gaps = 2/38 (5%)
Query: 76  TFLHRHGVVYRDLKLDNILLDAGG--SLLKLADFGRCA 111
           T+LH+H +V+RDLK +N+LL++    +L+K+ DFG  A
Sbjct: 118 TYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA 155

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLL--KLADFG 108
           + +LH+H +V+RD+K +NILL+   SLL  K+ DFG
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG 194

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 173

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 196

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 206

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 204

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 202

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 202

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 247

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 180

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 73  ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           + L +LH    VVYRDLKL+N++LD  G  +K+ DFG C         +K FC
Sbjct: 121 SALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFC 172

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 73  ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           + L +LH    VVYRDLKL+N++LD  G  +K+ DFG C         +K FC
Sbjct: 119 SALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFC 170

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 73  ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR-----KKIKLFC 119
           + L +LH    VVYRDLKL+N++LD  G  +K+ DFG C         +K FC
Sbjct: 120 SALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFC 171

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 187

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 176

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 181

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 33  FIKVLGKGSFGKELFGHYRS---ITNDTNSILRFXXXXXCAGDACLTFLHRHGVVYRDLK 89
           FIK+  +   G  L    RS      D    + F       G   L +LH + +V+RD+K
Sbjct: 93  FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG---LKYLHDNQIVHRDIK 149
Query: 90  LDNILLDAGGSLLKLADFGRCAR 112
            DN+L++    +LK++DFG   R
Sbjct: 150 GDNVLINTYSGVLKISDFGTSKR 172

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 168

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 180

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 168

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 168

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 168

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 168

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 168

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 168

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 172

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            L  LH  G++YRDLK +NILLD  G  +KL DFG
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFG 171

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 169

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 33  FIKVLGKGSFGKELFGHYRS---ITNDTNSILRFXXXXXCAGDACLTFLHRHGVVYRDLK 89
           FIK+  +   G  L    RS      D    + F       G   L +LH + +V+RD+K
Sbjct: 79  FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG---LKYLHDNQIVHRDIK 135
Query: 90  LDNILLDAGGSLLKLADFGRCAR 112
            DN+L++    +LK++DFG   R
Sbjct: 136 GDNVLINTYSGVLKISDFGTSKR 158

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            L  LH  G++YRDLK +NILLD  G  +KL DFG
Sbjct: 139 ALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFG 172

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            L  LH  G++YRDLK +NILLD  G  +KL DFG
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFG 171

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/32 (59%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + HRH VV+RDLK +N+LLDA  +  K+ADFG
Sbjct: 131 YCHRHMVVHRDLKPENVLLDAHMN-AKIADFG 161

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 71  GDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           G A L  +    +++RDLK  N+LL AGG++LK+ DFG
Sbjct: 115 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 152

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 71  GDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           G A L  +    +++RDLK  N+LL AGG++LK+ DFG
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 151

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L  LH  G++YRDLK +NILLD  G  +KL DFG
Sbjct: 143 LDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFG 175

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L +LH H +++RD+K  NILL   G L+KL DFG  +
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLSEPG-LVKLGDFGSAS 202

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L +LH H +++RD+K  NILL   G L+KL DFG  +
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPG-LVKLGDFGSAS 163

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + + + HRH VV+RDLK +N+LLDA  +  K+ADFG
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMN-AKIADFG 156

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 73  ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + + + HRH VV+RDLK +N+LLDA  +  K+ADFG
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMN-AKIADFG 156

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD    +LKL DFG
Sbjct: 154 LAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG 187

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	127
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-14
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-08
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-14
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-08
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-14
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	8e-09
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	8e-14
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-08
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	8e-14
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	8e-08
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	8e-14
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-07
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	9e-14
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-08
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-13
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-13
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-08
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-13
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	8e-08
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-13
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	7e-08
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-13
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-07
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-13
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-06
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-13
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	5e-06
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-13
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-06
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-13
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-07
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-13
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-13
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	5e-06
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	5e-13
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-05
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-12
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	7e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-12
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-12
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-12
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-12
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-12
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-11
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-11
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-11
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-11
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-11
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-11
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	8e-11
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-10
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-10
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-10
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-10
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-10
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-10
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-10
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-10
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-10
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-10
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-10
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-10
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-10
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-10
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-10
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	6e-10
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	7e-10
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	8e-10
3o0g_A	292	Cell division protein kinase 5; kinase activator c	8e-10
3niz_A	311	Rhodanese family protein; structural genomics, str	9e-10
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	9e-10
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	9e-10
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	9e-10
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-09
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-09
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-09
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-09
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-09
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-09
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-09
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-09
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-09
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-09
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-09
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-09
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-09
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-09
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-09
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-09
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-09
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-09
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	6e-09
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	6e-09
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-09
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-08
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-08
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-08
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-08
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-08
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-08
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-08
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-08
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-08
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	4e-08
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-08
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-08
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-08
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-08
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-08
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-08
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	6e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	6e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-08
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	6e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-08
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	7e-08
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-08
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	7e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	8e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	8e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-08
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-07
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-07
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-07
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-07
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-07
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-07
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-07
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-07
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-07
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-07
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-07
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-07
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	9e-07
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-06
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	4e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-06
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-06
2dyl_A	318	Dual specificity mitogen-activated protein kinase	9e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-05
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-05
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-05
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-05
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-05
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-05
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-05
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-05
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	8e-05
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	8e-05
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	8e-05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	8e-05
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-04
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-04
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	3e-04
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	3e-04
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	4e-04
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	4e-04
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	5e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	7e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	8e-04

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 66.5 bits (163), Expect = 3e-14
 Identities = 24/36 (66%), Positives = 27/36 (75%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FLH  G++YRDLKLDN+LLD  G   KLADFG C
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGH-CKLADFGMC 171

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 50.7 bits (122), Expect = 1e-08
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 7  GEKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGK 44
          G K S             ++G+++F FI+VLGKGSFGK
Sbjct: 1  GPKESSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGK 38

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 66.2 bits (161), Expect = 4e-14
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G +L  H + +         F    +  G   L FL   G++YRDLKLDN++LD+ G  +
Sbjct: 426 GGDLMYHIQQVGRFKEPHAVFYAAEIAIG---LFFLQSKGIIYRDLKLDNVMLDSEGH-I 481

Query: 103 KLADFGRC 110
           K+ADFG C
Sbjct: 482 KIADFGMC 489

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 18/43 (41%), Positives = 27/43 (62%)

Query: 2   ENRSDGEKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGK 44
             ++  EKT+   S   ++G   ++ L DF+F+ VLGKGSFGK
Sbjct: 314 GTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGK 356

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 65.8 bits (161), Expect = 5e-14
 Identities = 21/36 (58%), Positives = 28/36 (77%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L +LH  G++YRDLKLDN+LLD+ G  +KL D+G C
Sbjct: 166 LNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMC 200

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 51.2 bits (123), Expect = 8e-09
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 4  RSDGEKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGK 44
           S  E+     + R S      +GL+DF  ++V+G+GS+ K
Sbjct: 27 GSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAK 67

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 65.3 bits (160), Expect = 8e-14
 Identities = 21/36 (58%), Positives = 28/36 (77%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FL   G++YRDLKLDN++LD+ G  +K+ADFG C
Sbjct: 134 LFFLQSKGIIYRDLKLDNVMLDSEGH-IKIADFGMC 168

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 10 TSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGK 44
          T+   S   ++G   ++ L DF+F+ VLGKGSFGK
Sbjct: 1  TTNTVSKFDNNGNRDRMKLTDFNFLMVLGKGSFGK 35

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 65.4 bits (160), Expect = 8e-14
 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L +LH   +VYRDLK +NILLD+ G  + L DFG C
Sbjct: 152 LGYLHSLNIVYRDLKPENILLDSQGH-IVLTDFGLC 186

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 48.4 bits (116), Expect = 8e-08
 Identities = 14/44 (31%), Positives = 20/44 (45%)

Query: 1  MENRSDGEKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGK 44
          + N +     +           +      DFHF+KV+GKGSFGK
Sbjct: 10 LMNANPAPPPAPSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGK 53

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 65.3 bits (160), Expect = 8e-14
 Identities = 25/36 (69%), Positives = 28/36 (77%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FLH  G+VYRDLKLDNILLD  G  +K+ADFG C
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGH-IKIADFGMC 165

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 20 SGGDRKVGLEDFHFIKVLGKGSFGK 44
               K+ +EDF   K+LGKGSFGK
Sbjct: 8  PSLQIKLKIEDFILHKMLGKGSFGK 32

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 65.3 bits (160), Expect = 9e-14
 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L  LH+ G++YRDLK +NI+L+  G  +KL DFG C
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLC 168

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 49.1 bits (118), Expect = 4e-08
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 13 GGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGK 44
          G S    + G  K+  E F  ++VLGKG +GK
Sbjct: 1  GSSETSVNRGPEKIRPECFELLRVLGKGGYGK 32

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 65.3 bits (159), Expect = 1e-13
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G +L  H       + + +RF    +  G   L  +H   VVYRDLK  NILLD  G  +
Sbjct: 276 GGDLHYHLSQHGVFSEADMRFYAAEIILG---LEHMHNRFVVYRDLKPANILLDEHGH-V 331

Query: 103 KLADFGRC---ARKKIKLFC 119
           +++D G     ++KK     
Sbjct: 332 RISDLGLACDFSKKKPHASV 351

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 43.3 bits (102), Expect = 5e-06
 Identities = 6/23 (26%), Positives = 14/23 (60%)

Query: 22  GDRKVGLEDFHFIKVLGKGSFGK 44
            +  + + DF   +++G+G FG+
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGE 204

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 64.9 bits (159), Expect = 1e-13
 Identities = 21/36 (58%), Positives = 28/36 (77%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L +LH  G++YRDLKLDN+LLD+ G  +KL D+G C
Sbjct: 123 LNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMC 157

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 10/24 (41%), Positives = 17/24 (70%)

Query: 21 GGDRKVGLEDFHFIKVLGKGSFGK 44
          G    +GL+DF  ++V+G+GS+ K
Sbjct: 1  GAMDPLGLQDFDLLRVIGRGSYAK 24

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 64.5 bits (158), Expect = 1e-13
 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L  LH  G++YRDLK +NILLD  G  +KL DFG  
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLS 173

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 48.3 bits (116), Expect = 8e-08
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 22 GDRKVGLEDFHFIKVLGKGSFGK 44
          G  K     F  +KVLG+GSFGK
Sbjct: 17 GHEKADPSQFELLKVLGQGSFGK 39

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 64.6 bits (158), Expect = 1e-13
 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L  LH+ G++YRD+KL+NILLD+ G  + L DFG  
Sbjct: 172 LEHLHKLGIIYRDIKLENILLDSNGH-VVLTDFGLS 206

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 48.4 bits (116), Expect = 7e-08
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 2  ENRSDGEKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGK 44
          +                 +G   KVG+E+F  +KVLG G++GK
Sbjct: 27 DGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGK 69

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 64.5 bits (158), Expect = 1e-13
 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L +LH   VVYRD+KL+N++LD  G  +K+ DFG C
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLC 152

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 46.1 bits (110), Expect = 4e-07
 Identities = 12/20 (60%), Positives = 17/20 (85%)

Query: 25 KVGLEDFHFIKVLGKGSFGK 44
          KV + DF ++K+LGKG+FGK
Sbjct: 1  KVTMNDFDYLKLLGKGTFGK 20

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 64.4 bits (157), Expect = 2e-13
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 6/50 (12%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC-----ARKKIKLFC 119
           L  LH+  ++YRDLK +N+LLD  G+ ++++D G        + K K + 
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA 350

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 24  RKVGLEDFHFIKVLGKGSFGK 44
           + +G + F   +VLG+G FG+
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGE 200

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 64.0 bits (156), Expect = 2e-13
 Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           +  +HR G V+RD+K DNILLD  G  ++LADFG C +
Sbjct: 175 IDSVHRLGYVHRDIKPDNILLDRCGH-IRLADFGSCLK 211

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 43.2 bits (102), Expect = 5e-06
 Identities = 7/22 (31%), Positives = 16/22 (72%)

Query: 23 DRKVGLEDFHFIKVLGKGSFGK 44
          + ++  +DF  +KV+G+G+F +
Sbjct: 55 EVRLQRDDFEILKVIGRGAFSE 76

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 43  GKELFGHYRSITNDTNSILRFLLL-LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSL 101
           G ELF   R      N + +F    +  A    L +LH   ++YRDLK +NILLD  G  
Sbjct: 90  GGELFSLLRKSQRFPNPVAKFYAAEVCLA----LEYLHSKDIIYRDLKPENILLDKNGH- 144

Query: 102 LKLADFGRC 110
           +K+ DFG  
Sbjct: 145 IKITDFGFA 153

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 25 KVGLEDFHFIKVLGKGSFGK 44
          K  L+DF  ++ LG GSFG+
Sbjct: 2  KYSLQDFQILRTLGTGSFGR 21

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 63.9 bits (156), Expect = 3e-13
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 6/69 (8%)

Query: 43  GKELFGHYRSITNDTNSILRFLLL-LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSL 101
           G +L  H +   +     ++  +  L+ A    L +L    +++RD+K DNILLD  G  
Sbjct: 99  GGDLRYHLQQNVHFKEETVKLFICELVMA----LDYLQNQRIIHRDMKPDNILLDEHGH- 153

Query: 102 LKLADFGRC 110
           + + DF   
Sbjct: 154 VHITDFNIA 162

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 45.4 bits (108), Expect = 8e-07
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 22 GDRKVGLEDFHFIKVLGKGSFGK 44
           +  V  + F  ++ +GKGSFGK
Sbjct: 8  ENEDVNFDHFEILRAIGKGSFGK 30

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 64.0 bits (156), Expect = 3e-13
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC----ARKKIKLFC 119
           L  LHR  +VYRDLK +NILLD  G  ++++D G        + IK   
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRV 346

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 24  RKVGLEDFHFIKVLGKGSFGK 44
           + V    F   +VLGKG FG+
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGE 199

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 63.6 bits (155), Expect = 4e-13
 Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           +  +H+   V+RD+K DNIL+D  G  ++LADFG C +
Sbjct: 188 IDSVHQLHYVHRDIKPDNILMDMNGH-IRLADFGSCLK 224

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 43.2 bits (102), Expect = 5e-06
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query: 23 DRKVGLEDFHFIKVLGKGSFGK 44
            ++  EDF  +KV+G+G+FG+
Sbjct: 68 QMRLHREDFEILKVIGRGAFGE 89

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 63.1 bits (154), Expect = 5e-13
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 8/75 (10%)

Query: 43  GKELFGHYRSITNDTNSILRFLLL-LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSL 101
           G E+F H R I   +    RF    ++        +LH   ++YRDLK +N+L+D  G  
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHSLDLIYRDLKPENLLIDQQGY- 179

Query: 102 LKLADFGRCARKKIK 116
           +++ DFG    K++K
Sbjct: 180 IQVTDFGFA--KRVK 192

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 24 RKVGLEDFHFIKVLGKGSFGK 44
              L+ F  IK LG GSFG+
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGR 56

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 62.0 bits (151), Expect = 1e-12
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L  +H  G ++RD+K DN+LLD  G  LKLADFG C +
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMK 217

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 42.8 bits (101), Expect = 7e-06
 Identities = 9/22 (40%), Positives = 17/22 (77%)

Query: 23 DRKVGLEDFHFIKVLGKGSFGK 44
          D ++  ED+  +KV+G+G+FG+
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGE 84

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 62.0 bits (150), Expect = 1e-12
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L  LH +G+V+  L+  +I+LD  G  + L  F    R
Sbjct: 224 LASLHHYGLVHTYLRPVDIVLDQRGG-VFLTGFEHLVR 260

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 61.1 bits (149), Expect = 2e-12
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 6/69 (8%)

Query: 43  GKELFGHYRSITNDTNSILRFLLL-LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSL 101
             EL  + R I +   +  RF    ++ A    L +LH  G+++RDLK +NILL+     
Sbjct: 114 NGELLKYIRKIGSFDETCTRFYTAEIVSA----LEYLHGKGIIHRDLKPENILLNEDMH- 168

Query: 102 LKLADFGRC 110
           +++ DFG  
Sbjct: 169 IQITDFGTA 177

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query: 24 RKVGLEDFHFIKVLGKGSFGK 44
          RK   EDF F K+LG+GSF  
Sbjct: 25 RKKRPEDFKFGKILGEGSFST 45

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 60.4 bits (147), Expect = 4e-12
 Identities = 33/188 (17%), Positives = 44/188 (23%), Gaps = 73/188 (38%)

Query: 1   MENRSDGEKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGK---------------- 44
           M +       S G       G    +  + + FI+ LG+G F                  
Sbjct: 1   MGSSHHHHHHSSGRENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALK 60

Query: 45  --------------------ELFGH------YRSITNDTNSILRFLLLL-LCAG------ 71
                                LF H            +  +     LLL           
Sbjct: 61  RILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNE 120

Query: 72  ---------------------DAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
                                  C  L  +H  G  +RDLK  NILL   G    L D G
Sbjct: 121 IERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQ-PVLMDLG 179

Query: 109 RCARKKIK 116
              +  I 
Sbjct: 180 SMNQACIH 187

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 60.5 bits (147), Expect = 4e-12
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L +LH   +++ D+K DN+LL + GS   L DFG    
Sbjct: 163 LEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALC 200

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 60.0 bits (145), Expect = 6e-12
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
           L  LH +G+V+  L+  +I+LD  G  + L  F    R
Sbjct: 219 LASLHHYGLVHTYLRPVDIVLDQRGG-VFLTGFEHLVR 255

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 58.8 bits (143), Expect = 1e-11
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
              ++   + ++          +  L      L++ H   V++RD+K +N+LL + G  L
Sbjct: 93  LGTVYRELQKLSKFDEQRTATYITELANA---LSYCHSKRVIHRDIKPENLLLGSAGE-L 148

Query: 103 KLADFG 108
           K+ADFG
Sbjct: 149 KIADFG 154

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 59.4 bits (144), Expect = 1e-11
 Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 2/37 (5%)

Query: 75  LTFLH-RHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L +LH    VVYRDLKL+N++LD  G  +K+ DFG C
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLC 296

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 2   ENRSDGEKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGK 44
            + S  + +         +    +V + +F ++K+LGKG+FGK
Sbjct: 121 RSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGK 163

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 58.4 bits (142), Expect = 2e-11
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
             EL+   +             +  L      L + H   V++RD+K +N+L+   G  L
Sbjct: 98  RGELYKELQKHGRFDEQRSATFMEELADA---LHYCHERKVIHRDIKPENLLMGYKGE-L 153

Query: 103 KLADFG 108
           K+ADFG
Sbjct: 154 KIADFG 159

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 58.1 bits (140), Expect = 3e-11
 Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 1/38 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR 112
              L   G+V+     DN+ +   G  L L D     +
Sbjct: 207 AANLQSKGLVHGHFTPDNLFIMPDGR-LMLGDVSALWK 243

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 57.4 bits (139), Expect = 6e-11
 Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L +LH  GV++RD+K D+ILL   G  +KL+DFG CA
Sbjct: 154 LAYLHAQGVIHRDIKSDSILLTLDGR-VKLSDFGFCA 189

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 56.9 bits (138), Expect = 6e-11
 Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L FLH + V++RD+K DNILL   GS +KL DFG CA
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCA 164

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 57.2 bits (138), Expect = 8e-11
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L++LH  G+VY DLK +NI+L      LKL D G
Sbjct: 195 LSYLHSIGLVYNDLKPENIMLTEEQ--LKLIDLG 226

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 56.2 bits (136), Expect = 1e-10
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLF 118
             H  GVV+RD+K +NIL+D      KL DFG  A    + +
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY 195

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 56.2 bits (136), Expect = 1e-10
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLF 118
             H  GV++RD+K +NIL+D     LKL DFG  A  K  ++
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 205

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 56.2 bits (135), Expect = 1e-10
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 6/51 (11%)

Query: 60  ILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGG--SLLKLADFG 108
           I   L  +  A    L +LH + +++RDLK +NI+L  G    + K+ D G
Sbjct: 123 IRTLLSDISSA----LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 55.8 bits (135), Expect = 2e-10
 Identities = 15/39 (38%), Positives = 29/39 (74%), Gaps = 1/39 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK 113
           L +LH + +V+RD+K DN+L++    +LK++DFG  +++
Sbjct: 135 LKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFG-TSKR 172

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 56.0 bits (135), Expect = 2e-10
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            +  +H+HG+V+ DLK  N L+  G  +LKL DFG
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIVDG--MLKLIDFG 199

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 5/65 (7%)

Query: 44  KELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLK 103
                        T +I   +  LL      L FLH H VV+RDLK  NIL+ + G  +K
Sbjct: 106 TTYLDKVPEPGVPTETIKDMMFQLLRG----LDFLHSHRVVHRDLKPQNILVTSSG-QIK 160

Query: 104 LADFG 108
           LADFG
Sbjct: 161 LADFG 165

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 55.4 bits (134), Expect = 2e-10
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)

Query: 60  ILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +  +L   L A    L  LH  G+V+ D+K  NI L   G   KL DFG
Sbjct: 159 VWGYLRDTLLA----LAHLHSQGLVHLDVKPANIFLGPRGR-CKLGDFG 202

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 55.1 bits (133), Expect = 3e-10
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            +  +H+HG+V+ DLK  N L+  G  +LKL DFG
Sbjct: 120 AVHTIHQHGIVHSDLKPANFLIVDG--MLKLIDFG 152

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 55.0 bits (133), Expect = 3e-10
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 43  GKELFGH--YRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGS 100
              L+      ++    +   R    +L A    L+++H  G+++RDLK  NI +D   +
Sbjct: 99  NGTLYDLIHSENLNQQRDEYWRLFRQILEA----LSYIHSQGIIHRDLKPMNIFIDESRN 154

Query: 101 LLKLADFG 108
            +K+ DFG
Sbjct: 155 -VKIGDFG 161

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 55.0 bits (133), Expect = 3e-10
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            +  +H+HG+V+ DLK  N L+  G  +LKL DFG
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLIVDG--MLKLIDFG 171

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 55.0 bits (133), Expect = 4e-10
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 9/57 (15%)

Query: 67  LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR----KKIKLFC 119
           ++ A   C    H+  +V+RDLK +N+LLDA  + +K+ADFG         K+  FC
Sbjct: 123 IVSAVQYC----HQKRIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDAFC 174

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 55.0 bits (133), Expect = 4e-10
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLL 122
           +LH  G+V++D+K  N+LL  GG+ LK++  G           D  
Sbjct: 124 YLHSQGIVHKDIKPGNLLLTTGGT-LKISALGVAEALHPFAADDTC 168

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 54.7 bits (132), Expect = 5e-10
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L +LH H +++RD+K  NILL   G  +KL DFG  +
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLSEPGL-VKLGDFGSAS 202

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 54.7 bits (132), Expect = 5e-10
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L +LH    ++RD+K  NILL+  G   KLADFG   
Sbjct: 138 LEYLHFMRKIHRDIKAGNILLNTEGH-AKLADFGVAG 173

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 54.5 bits (132), Expect = 5e-10
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 5/65 (7%)

Query: 44  KELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLK 103
           +              +I   +   L      L FLH + +V+RDLK +NIL+ +GG  +K
Sbjct: 106 RTYLDKAPPPGLPAETIKDLMRQFLRG----LDFLHANCIVHRDLKPENILVTSGG-TVK 160

Query: 104 LADFG 108
           LADFG
Sbjct: 161 LADFG 165

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 54.3 bits (131), Expect = 5e-10
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA----RKKIKLFC 119
           +L    +++RD+K +NI++    + +KL DFG  A     K    FC
Sbjct: 145 YLRLKDIIHRDIKDENIVIAEDFT-IKLIDFGSAAYLERGKLFYTFC 190

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 54.2 bits (131), Expect = 6e-10
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L FLH   +++RDLK  N+L+   G  ++LADFG  A
Sbjct: 130 LNFLHSKRIIHRDLKAGNVLMTLEGD-IRLADFGVSA 165

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 54.3 bits (131), Expect = 6e-10
 Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L +LH++G ++RD+K  NILL   GS +++ADFG  A
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGS-VQIADFGVSA 169

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 54.2 bits (131), Expect = 7e-10
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
             +LHR+ V++RDLKL N+ L+     +K+ DFG
Sbjct: 154 CQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFG 186

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 53.7 bits (130), Expect = 8e-10
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +L  LL      L F H H V++RDLK  N+L++  G  +KLADFG
Sbjct: 108 YLFQLLQG----LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFG 148

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 53.7 bits (130), Expect = 8e-10
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           FL  LL      L F H   V++RDLK  N+L++  G  LKLA+FG
Sbjct: 106 FLFQLLKG----LGFCHSRNVLHRDLKPQNLLINRNGE-LKLANFG 146

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 53.7 bits (130), Expect = 9e-10
 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +L  LL      +   H+H +++RDLK  N+L+++ G+ LKLADFG
Sbjct: 124 YLYQLLRG----VAHCHQHRILHRDLKPQNLLINSDGA-LKLADFG 164

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 53.8 bits (129), Expect = 9e-10
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L ++H  G V+R +K  +IL+   G  + L+      
Sbjct: 141 LDYIHHMGYVHRSVKASHILISVDGK-VYLSGLRSNL 176

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 54.0 bits (130), Expect = 9e-10
 Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           + HRH VV+RDLK +N+LLDA  +  K+ADFG   
Sbjct: 131 YCHRHMVVHRDLKPENVLLDAHMN-AKIADFGLSN 164

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 53.7 bits (130), Expect = 9e-10
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           F   LL      L F H + +++RDLK  N+L++  G  LKL DFG
Sbjct: 113 FQWQLLQG----LAFCHENKILHRDLKPQNLLINKRG-QLKLGDFG 153

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 53.5 bits (129), Expect = 1e-09
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKKIKLFCDLL 122
           +LH  G+ +RD+K +N+LLD   + LK++DFG     +      LL
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLL 164

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           FLL LL      + + H   V++RDLK  N+L++  G  LK+ADFG
Sbjct: 105 FLLQLLNG----IAYCHDRRVLHRDLKPQNLLINREG-ELKIADFG 145

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 53.4 bits (129), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
             +LHR+ V++RDLKL N+ L+     +K+ DFG
Sbjct: 128 CQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFG 160

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)

Query: 56  DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
             + +       L A    + F H+H  ++RD+K +NIL+     ++KL DFG
Sbjct: 100 PEHLVKSITWQTLQA----VNFCHKHNCIHRDVKPENILITKHS-VIKLCDFG 147

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 53.5 bits (129), Expect = 1e-09
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSL-LKLADFG 108
           + H   + +RDLKL+N LLD   +  LK+ DFG
Sbjct: 131 YCHSMQICHRDLKLENTLLDGSPAPRLKICDFG 163

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 53.5 bits (129), Expect = 1e-09
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L +LH    ++RD+K  N+LL   G  +KLADFG   
Sbjct: 132 LDYLHSEKKIHRDIKAANVLLSEHGE-VKLADFGVAG 167

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 53.0 bits (128), Expect = 1e-09
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           +LH   +++RD+K  N+L+   G  +K+ADFG   
Sbjct: 152 YLHYQKIIHRDIKPSNLLVGEDGH-IKIADFGVSN 185

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + +LH HG+++RDL L N+LL    + +K+ADFG
Sbjct: 125 MLYLHSHGILHRDLTLSNLLLTRNMN-IKIADFG 157

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 53.0 bits (128), Expect = 1e-09
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           +LH  G+ +RD+K +N+LLD   + LK++DFG   
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDN-LKISDFGLAT 153

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           ++L+ L      L +LH+H +++RDLK +N+LLD  G +LKLADFG
Sbjct: 117 YMLMTLQG----LEYLHQHWILHRDLKPNNLLLDENG-VLKLADFG 157

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 52.8 bits (127), Expect = 2e-09
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 60  ILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           IL + + +  A    L  +H   +++RD+K  NI L   G  ++L DFG
Sbjct: 127 ILDWFVQICLA----LKHVHDRKILHRDIKSQNIFLTKDG-TVQLGDFG 170

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 5/53 (9%)

Query: 56  DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           D   + ++L  ++      + F H H +++RD+K +NIL+   G  +KL DFG
Sbjct: 122 DYQVVQKYLFQIING----IGFCHSHNIIHRDIKPENILVSQSGV-VKLCDFG 169

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 52.8 bits (127), Expect = 2e-09
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           L+ LH+H V++RD+K  N+LL      +KL DFG  A
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAE-VKLVDFGVSA 177

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 52.8 bits (127), Expect = 2e-09
 Identities = 40/182 (21%), Positives = 57/182 (31%), Gaps = 81/182 (44%)

Query: 7   GEKTSGGGSGRGSS---GGDRKVGLEDFHFIKVLGKGSFG-------------------- 43
           G  + GG SGR  S   G   ++G       +VL +G F                     
Sbjct: 3   GPGSLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLL 62

Query: 44  -----------------KELFGH-----------YRSITNDTNSILRFLLLLLCAG---- 71
                            K+L GH                +DT      LL  LC G    
Sbjct: 63  SNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE 122

Query: 72  ---------------------DAC--LTFLHRHG--VVYRDLKLDNILLDAGGSLLKLAD 106
                                  C  +  +HR    +++RDLK++N+LL   G+ +KL D
Sbjct: 123 FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT-IKLCD 181

Query: 107 FG 108
           FG
Sbjct: 182 FG 183

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           FL  LL      L + HR  V++RDLK  N+L++  G  LKLADFG
Sbjct: 105 FLFQLLRG----LAYCHRQKVLHRDLKPQNLLINERGE-LKLADFG 145

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 52.6 bits (127), Expect = 3e-09
 Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 4/45 (8%)

Query: 64  LLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           ++ +L  G   L ++HR+ +++RD+K  N+L+   G +LKLADFG
Sbjct: 129 VMQMLLNG---LYYIHRNKILHRDMKAANVLITRDG-VLKLADFG 169

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           + HRH VV+RDLK +N+LLDA  +  K+ADFG   
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMN-AKIADFGLSN 159

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 52.3 bits (126), Expect = 3e-09
 Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA 111
           + HRH +V+RDLK +N+LLD   + +K+ADFG   
Sbjct: 123 YCHRHKIVHRDLKPENLLLDDNLN-VKIADFGLSN 156

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 52.4 bits (126), Expect = 3e-09
 Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           FLH + +V+RDLK +NILLD     ++L+DFG
Sbjct: 215 FLHANNIVHRDLKPENILLD-DNMQIRLSDFG 245

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 51.8 bits (124), Expect = 5e-09
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDA-GGSLLKLADFG 108
           L +LH  G+ +RD+K +N L        +KL DFG
Sbjct: 181 LHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFG 215

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 51.6 bits (124), Expect = 5e-09
 Identities = 16/34 (47%), Positives = 24/34 (70%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD   ++LKL DFG
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 202

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 51.6 bits (124), Expect = 6e-09
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L ++H  G+ +RD+K  N+LLD    +LKL DFG
Sbjct: 154 LAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG 187

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 51.5 bits (124), Expect = 6e-09
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 8/50 (16%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSL----LKLADFG 108
           FL  L+      + F H    ++RDLK  N+LL    +     LK+ DFG
Sbjct: 137 FLYQLING----VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 51.4 bits (123), Expect = 6e-09
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGG---SLLKLADFG 108
           +  L  +G+V+R++K  NI+   G    S+ KL DFG
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 50.7 bits (122), Expect = 1e-08
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 77  FLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            LH+  +V+RDLK +NILLD     +KL DFG
Sbjct: 139 ALHKLNIVHRDLKPENILLD-DDMNIKLTDFG 169

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 3/37 (8%)

Query: 75  LTFLHRH---GVVYRDLKLDNILLDAGGSLLKLADFG 108
           + +LH      +++RDLK  N+LL AGG++LK+ DFG
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 151

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 50.6 bits (121), Expect = 1e-08
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)

Query: 64  LLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGS---LLKLADFG 108
           LL  +  G   + +LH + V++RDLK  NIL+   G     +K+AD G
Sbjct: 133 LLYQILDG---IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 177

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGG---SLLKLADFG 108
           +  L  +G+V+R++K  NI+   G    S+ KL DFG
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 50.4 bits (121), Expect = 1e-08
 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           + +LH +G+++RDLK +N+LL       L+K+ DFG
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILL--DAGGSLLKLADFG 108
           + +LH   + +RD+K +N+L       ++LKL DFG
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 209

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 75  LTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFG 108
            +++H    + +RD+K  NIL+D  G  +KL+DFG
Sbjct: 164 FSYIHNEKNICHRDVKPSNILMDKNGR-VKLSDFG 197

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 49.7 bits (119), Expect = 2e-08
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 75  LTFLHRHG--VVYRDLKLDNILLDAGGSLLKLADFGRCARKK 114
           L FLH     +++RDLK DNI +      +K+ D G    K+
Sbjct: 142 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 49.7 bits (119), Expect = 3e-08
 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           + +LH +G+++RDLK +N+LL       L+K+ DFG
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 60  ILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            L     +       + ++H   ++ RDLK  NI L      +K+ DFG
Sbjct: 124 ALELFEQITKG----VDYIHSKKLINRDLKPSNIFLVDTK-QVKIGDFG 167

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 5/49 (10%)

Query: 60  ILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + ++ + L  A    L  +H   V++RD+K  N+ + A G ++KL D G
Sbjct: 138 VWKYFVQLCSA----LEHMHSRRVMHRDIKPANVFITATG-VVKLGDLG 181

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 75  LTFLHRHGVVYRDLKLDNILL---DAGGSLLKLADFG 108
           + +LH  GVV+RDLK  NIL          +++ DFG
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFG 165

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 49.4 bits (118), Expect = 3e-08
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILL-DAGGSLLKLADFG 108
           L  +H +  V+ DLK +NI+      + LKL DFG
Sbjct: 268 LCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFG 302

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 49.1 bits (117), Expect = 4e-08
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)

Query: 56  DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +    L   + +  A    + FLH  G+++RDLK  NI        +K+ DFG
Sbjct: 162 EHGVCLHIFIQIAEA----VEFLHSKGLMHRDLKPSNIFFTMDDV-VKVGDFG 209

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 49.3 bits (118), Expect = 4e-08
 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           + +LH+H +V+RD+K +NILL+       +K+ DFG
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG 194

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 49.2 bits (118), Expect = 4e-08
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 77  FLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           +LH   + +RD+K +N+L       ++LKL DFG
Sbjct: 132 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 165

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 49.3 bits (118), Expect = 4e-08
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILL--DAGGSLLKLADFG 108
           + FLH H + +RD+K +N+L       ++LKL DFG
Sbjct: 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 49.2 bits (118), Expect = 4e-08
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILL-DAGGSLLKLADFG 108
           L FLH H + + D++ +NI+      S +K+ +FG
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFG 149

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 48.9 bits (117), Expect = 5e-08
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILL-DAGGSLLKLADFG 108
           L  +H H +V+ D+K +NI+      S +K+ DFG
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFG 196

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 48.8 bits (117), Expect = 5e-08
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           L FLH  G+ +RDLK +NIL +     S +K+ DF 
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFD 159

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 48.9 bits (117), Expect = 5e-08
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILL-DAGGSLLKLADFG 108
           +  +H+  +++ DLK +NIL  +     +K+ DFG
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFG 234

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 48.7 bits (117), Expect = 6e-08
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 75  LTFLHRHGVVYRDLKLDNILL---DAGGSLLKLADFG 108
           + +LH   + + DLK +NI+L   +     +KL DFG
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 48.6 bits (116), Expect = 6e-08
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)

Query: 67  LLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L  A    + F+H  G+ +RD+K  N+L+++  + LKL DFG
Sbjct: 150 LFRA----VGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFG 187

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 48.4 bits (116), Expect = 6e-08
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           ++  +L A    L + H  G+++RD+K  N+++D     L+L D+G
Sbjct: 135 YMYEILKA----LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWG 176

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 48.4 bits (116), Expect = 6e-08
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 17/74 (22%)

Query: 43  GKELF------GHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLD 96
           G ELF        +    +D   I++ +        + +T++H+H +V+RDLK +NILL+
Sbjct: 105 GGELFDEIIKRKRFSE--HDAARIIKQVF-------SGITYMHKHNIVHRDLKPENILLE 155

Query: 97  --AGGSLLKLADFG 108
                  +K+ DFG
Sbjct: 156 SKEKDCDIKIIDFG 169

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 17/36 (47%), Positives = 27/36 (75%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           + + H +G+V+R+LK +N+LL   A G+ +KLADFG
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG 153

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 48.5 bits (116), Expect = 6e-08
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 5/53 (9%)

Query: 56  DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           + +  L   L +  A    + FLH  G+++RDLK  NI        +K+ DFG
Sbjct: 116 ERSVCLHIFLQIAEA----VEFLHSKGLMHRDLKPSNIFFTMDDV-VKVGDFG 163

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 48.4 bits (116), Expect = 7e-08
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILL--DAGGSLLKLADFG 108
           ++ +H  GVV+RDLK +N+L   +     +K+ DFG
Sbjct: 119 VSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFG 154

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 48.4 bits (116), Expect = 7e-08
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 56  DTNSILRFLLLLLCAGDAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            + +      L+  A      + +LH   +++RDLK +NI L    + +K+ DFG
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT-VKIGDFG 165

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 48.4 bits (116), Expect = 7e-08
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           + + H+  V +RDLK +N L    +  S LKL DFG
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFG 154

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 48.5 bits (116), Expect = 8e-08
 Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           +T++H+H +V+RDLK +NILL+       +K+ DFG
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG 169

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 48.2 bits (115), Expect = 8e-08
 Identities = 17/36 (47%), Positives = 28/36 (77%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           +T+LH+H +V+RDLK +N+LL+     +L+K+ DFG
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFG 184

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 48.2 bits (115), Expect = 9e-08
 Identities = 13/36 (36%), Positives = 28/36 (77%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           +T++H++ +V+RDLK +N+LL+  +  + +++ DFG
Sbjct: 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG 174

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%)

Query: 75  LTFLHRHGVVYRDLKLDNILL---DAGGSLLKLADFGRCARK 113
           + +LH   + + DLK +NI+L   +     +K+ DFG  A K
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG-LAHK 167

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILL--DAGGSLLKLADFG 108
           + +LH +G+V+RDLK +N+L    A  + LK+ADFG
Sbjct: 161 VAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFG 196

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 75  LTFLHRHGVVYRDLKLDNILL---DAGGSLLKLADFG 108
           + +LH   + + DLK +NI+L   +     +KL DFG
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 77  FLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           + H   VV++DLK +NIL    +  S +K+ DFG
Sbjct: 139 YFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFG 172

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 17/36 (47%), Positives = 27/36 (75%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           + + H +G+V+R+LK +N+LL   A G+ +KLADFG
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG 176

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILL--DAGGSLLKLADFG 108
           + +LH +G+V+RDLK +N+L       S + + DFG
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFG 154

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 47.5 bits (113), Expect = 1e-07
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            L  LL      + ++H  G+++RDLK  N L++   S +K+ DFG
Sbjct: 161 LLYNLLVG----VKYVHSAGILHRDLKPANCLVNQDCS-VKVCDFG 201

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           L + H + +++RD+K   +LL      + +KL  FG
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG 178

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           +   H+ GVV+R+LK +N+LL     G+ +KLADFG
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFG 158

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFG 108
           + +LH++ +V+ DLK  NILL        +K+ DFG
Sbjct: 144 VYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 75  LTFLHRHGVVYRDLKLDNILL---DAGGSLLKLADFG 108
           + +LH   + + DLK +NI+L   +     +KL DFG
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L   H  G  +RD+K +NIL+ A      L DFG
Sbjct: 147 LDAAHAAGATHRDVKPENILVSADDF-AYLVDFG 179

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 56  DTNSILRFLLLLLCAGDAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           D   +L        A +    + +LH  G++++DLK  N+  D G   + + DFG
Sbjct: 122 DAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNG--KVVITDFG 174

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 46.9 bits (111), Expect = 3e-07
 Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 18/88 (20%)

Query: 43  GKELFGHYRSITNDTNSIL-----RFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDA 97
              L        N    ++         + +      +  +H   +++ D+K DN +L  
Sbjct: 151 YGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYM---IEQVHDCEIIHGDIKPDNFILGN 207

Query: 98  GGSL----------LKLADFGRCARKKI 115
           G             L L D G+    K+
Sbjct: 208 GFLEQDDEDDLSAGLALIDLGQSIDMKL 235

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 46.1 bits (110), Expect = 4e-07
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +   H   +V+RD+K  NIL+D+  + LK+ DFG
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKT-LKIFDFG 156

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 45.8 bits (109), Expect = 5e-07
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 55  NDTNSILRFLLLLLCAGDAC--LTFLHRHG--VVYRDLKLDNILLDAGGSLLKLADFG 108
           +     L     L  A D    + +LH     +V+R+LK  N+L+D   + +K+ DFG
Sbjct: 128 SGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYT-VKVCDFG 184

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 45.8 bits (109), Expect = 6e-07
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 56  DTNSILRFLLLLLCAGDAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
             +S   +   +  A D    + +LH   +++RDL   N L+    + + +ADFG
Sbjct: 100 SMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKN-VVVADFG 153

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 45.3 bits (108), Expect = 7e-07
 Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L F H++G+++RD+K  NI++ A  + +K+ DFG
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNA-VKVMDFG 161

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 45.1 bits (107), Expect = 9e-07
 Identities = 32/173 (18%), Positives = 45/173 (26%), Gaps = 69/173 (39%)

Query: 7   GEKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFG----------------------- 43
           G   S              VG   F    VLG G+ G                       
Sbjct: 2   GSSPSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF 61

Query: 44  ----------KELFGH-----YRSITNDTNSILRFLLLLLCAGD---------------- 72
                     +E   H     Y     D      ++ + LCA                  
Sbjct: 62  SFADREVQLLRESDEHPNVIRYFCTEKDRQFQ--YIAIELCAATLQEYVEQKDFAHLGLE 119

Query: 73  ---------ACLTFLHRHGVVYRDLKLDNILLDAGGSL----LKLADFGRCAR 112
                    + L  LH   +V+RDLK  NIL+    +       ++DFG C +
Sbjct: 120 PITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 45.0 bits (107), Expect = 1e-06
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           F+  LL      L ++H   V++RDLK  N+ ++    +LK+ DFG
Sbjct: 125 FMYQLLRG----LKYIHSANVLHRDLKPANLFINTEDLVLKIGDFG 166

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 9/38 (23%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD----AGGSLLKLADFG 108
           + FLH +  ++RD+K  NILLD    A     K++DFG
Sbjct: 146 INFLHENHHIHRDIKSANILLDEAFTA-----KISDFG 178

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 10/54 (18%)

Query: 60  ILRFLLLLLCAGDACLTFLHR-----HGVVYRDLKLDNILLDAGGSLLKLADFG 108
           +LR +  L  A    L   HR     H V++RDLK  N+ LD   + +KL DFG
Sbjct: 113 VLRVMTQLTLA----LKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFG 161

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 44.0 bits (104), Expect = 2e-06
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 14/54 (25%)

Query: 75  LTFLHRHGVVYRDLKLDNILLD------------AGGSLLKLADFGRCARKKIK 116
           +  LH   +++RDLK  NIL+             A    + ++DFG C  KK+ 
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC--KKLD 179

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 10/45 (22%)

Query: 69  CAGDAC-LTFLHRHGVVYRDLKLDNILLD----AGGSLLKLADFG 108
           C G A  L +LH   +++RD+K  NILLD          K+ DFG
Sbjct: 145 CIGAARGLHYLHTRAIIHRDVKSINILLDENFVP-----KITDFG 184

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 5/63 (7%)

Query: 50  YRSITNDTNSILRFLLLLLCAGDAC--LTFLHRHG--VVYRDLKLDNILLDAGGSLLKLA 105
           Y  +   TN ++     +  A D    + FLH     +    L   ++++D   +  +++
Sbjct: 97  YNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMT-ARIS 155

Query: 106 DFG 108
              
Sbjct: 156 MAD 158

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 8/66 (12%)

Query: 51  RSITNDTNSILRFLLLLLCAGDAC--LTFLHRHG--VVYRDLKLDNILLDAGGS----LL 102
                D    +++ + L    D    + ++      +V+RDL+  NI L +         
Sbjct: 109 YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCA 168

Query: 103 KLADFG 108
           K+ADFG
Sbjct: 169 KVADFG 174

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 7/34 (20%), Positives = 10/34 (29%), Gaps = 1/34 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
               HR GV         + +   G  + LA   
Sbjct: 142 ADAAHRAGVALSIDHPSRVRVSIDGD-VVLAYPA 174

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 43.6 bits (103), Expect = 4e-06
 Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILL-DAGGSLLKLADFG 108
           CL  LH++ +++ DLK +NILL   G S +K+ DFG
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 43.1 bits (102), Expect = 4e-06
 Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 22/67 (32%)

Query: 60  ILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGS------------------L 101
           +   LL +       L ++H   +V+ D+K  NI +                       +
Sbjct: 117 LKDLLLQVGRG----LRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVM 172

Query: 102 LKLADFG 108
            K+ D G
Sbjct: 173 FKIGDLG 179

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 43.0 bits (102), Expect = 5e-06
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 6/44 (13%)

Query: 67  LLCAGDACLTFLHR--HGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L+ +    +  LH     V +RD+K  N+L++     LKL DFG
Sbjct: 138 LIRS----IGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG 177

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 42.4 bits (100), Expect = 9e-06
 Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 2/35 (5%)

Query: 75  LTFLH-RHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L +L  +HGV++RD+K  NILLD  G  +KL DFG
Sbjct: 137 LYYLKEKHGVIHRDVKPSNILLDERGQ-IKLCDFG 170

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 42.4 bits (100), Expect = 9e-06
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 11/61 (18%)

Query: 58  NSILRFLLLLLCAGDAC--LTFLH--------RHGVVYRDLKLDNILLDAGGSLLKLADF 107
           ++ L    +L  A  +   L  LH        +  + +RDLK  NIL+   G+   +AD 
Sbjct: 128 STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT-CCIADL 186

Query: 108 G 108
           G
Sbjct: 187 G 187

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            L  LL        F+H  G+++RDLK  N LL+   S +K+ DFG
Sbjct: 134 ILYNLLLG----ENFIHESGIIHRDLKPANCLLNQDCS-VKVCDFG 174

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 41.9 bits (99), Expect = 1e-05
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 12/60 (20%)

Query: 61  LRFLLLLLCAGDAC--LTFLHRHG---VVYRDLKLDNILLD-------AGGSLLKLADFG 108
           +   +L+  A      + +LH      +++RDLK  NIL+            +LK+ DFG
Sbjct: 102 IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 22/86 (25%)

Query: 39  KGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDAC--LTFLH--------RHGVVYRDL 88
            GS    L+ + +  T DT S LR              L  LH        +  + +RDL
Sbjct: 90  MGS----LYDYLQLTTLDTVSCLRI------VLSIASGLAHLHIEIFGTQGKPAIAHRDL 139

Query: 89  KLDNILLDAGGSLLKLADFGRCARKK 114
           K  NIL+   G    +AD G  A   
Sbjct: 140 KSKNILVKKNGQ-CCIADLG-LAVMH 163

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 75  LTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L  L     +++RD+K  NILLD  G+ +KL DFG
Sbjct: 138 LNHLKENLKIIHRDIKPSNILLDRSGN-IKLCDFG 171

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 41.4 bits (97), Expect = 2e-05
 Identities = 16/35 (45%), Positives = 26/35 (74%), Gaps = 2/35 (5%)

Query: 75  LTFLH-RHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           LT+L  +H +++RD+K  NIL+++ G  +KL DFG
Sbjct: 144 LTYLREKHKIMHRDVKPSNILVNSRGE-IKLCDFG 177

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)

Query: 75  LTFLH-RHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           L  LH +  V++RD+K  N+L++A G  +K+ DFG
Sbjct: 122 LEHLHSKLSVIHRDVKPSNVLINALGQ-VKMCDFG 155

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            +  L+      + +LH  G+++RD+K  NILL+A    +K+ADFG
Sbjct: 114 VVYQLIKV----IKYLHSGGLLHRDMKPSNILLNAECH-VKVADFG 154

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            L  +LC     +  LH  G+++RDLK  NI++ +  + LK+ DFG
Sbjct: 132 LLYQMLCG----IKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 172

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 41.0 bits (96), Expect = 3e-05
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 18/79 (22%)

Query: 39  KGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLH---------RHGVVYRDLK 89
            GS    L  +    T+D  S  R L   +  G   L +LH         +  + +RDL 
Sbjct: 96  NGS----LXKYLSLHTSDWVSSCR-LAHSVTRG---LAYLHTELPRGDHYKPAISHRDLN 147

Query: 90  LDNILLDAGGSLLKLADFG 108
             N+L+   G+   ++DFG
Sbjct: 148 SRNVLVKNDGT-CVISDFG 165

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 41.0 bits (96), Expect = 3e-05
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            L  +LC     +  LH  G+++RDLK  NI++ +  + LK+ DFG
Sbjct: 169 LLYQMLCG----IKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFG 209

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 40.7 bits (96), Expect = 3e-05
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            +  +L      L ++H  GVV+RDLK  N+ ++     LK+ DFG
Sbjct: 131 LVYQMLKG----LKYIHSAGVVHRDLKPGNLAVNEDCE-LKILDFG 171

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            +  +L      L ++H  G+++RDLK  N+ ++     LK+ DFG
Sbjct: 133 LVYQMLKG----LRYIHAAGIIHRDLKPGNLAVNEDCE-LKILDFG 173

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 40.4 bits (95), Expect = 4e-05
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            +  +L      L ++H   +++RDLK  N+ ++     LK+ DFG
Sbjct: 137 LIYQILRG----LKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFG 177

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 40.1 bits (94), Expect = 6e-05
 Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 22/86 (25%)

Query: 39  KGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDAC--LTFLH--------RHGVVYRDL 88
            GS    LF +    T     +++       A      L  LH        +  + +RDL
Sbjct: 124 HGS----LFDYLNRYTVTVEGMIKL------ALSTASGLAHLHMEIVGTQGKPAIAHRDL 173

Query: 89  KLDNILLDAGGSLLKLADFGRCARKK 114
           K  NIL+   G+   +AD G  A + 
Sbjct: 174 KSKNILVKKNGT-CCIADLG-LAVRH 197

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 39.6 bits (92), Expect = 8e-05
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAG--GSLLKLADFGRCAR 112
            + F+H    ++RD+K DN L+  G   + + + DFG   +
Sbjct: 115 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 39.6 bits (93), Expect = 8e-05
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           F+  +L      L  LH  GVV+RDL   NILL      + + DF 
Sbjct: 139 FMYHILLG----LHVLHEAGVVHRDLHPGNILLADNND-ITICDFN 179

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 39.6 bits (93), Expect = 8e-05
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           FL  +L      L ++H   V++RDLK  N+LL+     LK+ DFG
Sbjct: 133 FLYQILRG----LKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFG 173

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 39.5 bits (93), Expect = 8e-05
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 63  FLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           F+   L A    +  LH   V++RDLK  N+L+++    LK+ DFG
Sbjct: 117 FIYQTLRA----VKVLHGSNVIHRDLKPSNLLINSNCD-LKVCDFG 157

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 13/61 (21%)

Query: 65  LLLLCAGDAC-LTFLHRH----------GVVYRDLKLDNILLDAGGSLLKLADFGRCARK 113
           L  +    A  L +LH             + +RD+K  N+LL    +   +ADFG  A K
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLT-ACIADFG-LALK 180

Query: 114 K 114
            
Sbjct: 181 F 181

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAG-GSLLKLADFG 108
            L ++H H  V+ D+K  N+LL+      + L D+G
Sbjct: 164 ILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYG 199

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAG-GSLLKLADFG 108
            L ++H +  V+ D+K  N+LL       + LAD+G
Sbjct: 163 VLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYG 198

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGS----LLKLADFG 108
            +  +H   +VYRD+K DN L+    S    ++ + DFG
Sbjct: 118 RVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 4/39 (10%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGS----LLKLADFG 108
            + ++H   ++YRD+K +N L+   G+    ++ + DF 
Sbjct: 117 RMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGG-SLLKLADFG 108
            L FLH +  V+ ++  +NI +D    S + LA +G
Sbjct: 171 ALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYG 206

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 37.2 bits (87), Expect = 5e-04
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 9/46 (19%)

Query: 69  CAGDAC-LTFLHRHG---VVYRDLKLDNILLDAGGSLL--KLADFG 108
             G A  L +LH H    +++RD+K  NILLD         + DFG
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFG 179

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 74  CLTFLHRH--GVVYRDLKLDNILL-DAGGSLLKLADFG 108
            L FL      +++ DLK +NILL +   S +K+ DFG
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 61  LRFLLLLLCAGDAC--LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           LR   LL   GDA   + +L     ++RDL   N L+     +LK++DFG
Sbjct: 210 LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN-VLKISDFG 258

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	127
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.93
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.9
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.9
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.9
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.9
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.9
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.89
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.89
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.88
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.88
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.86
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.86
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.86
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.85
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.85
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.85
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.84
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.84
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.81
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.81
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.8
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.79
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.79
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.78
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.77
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.77
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.77
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.77
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.76
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.76
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.76
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.76
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.76
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.75
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.74
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.74
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.73
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.73
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.73
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.72
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.72
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.72
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.72
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.71
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.71
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.71
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.71
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.71
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.71
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.71
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.7
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.7
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.7
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.7
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.69
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.69
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.69
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.69
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.69
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.69
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.69
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.69
3niz_A	311	Rhodanese family protein; structural genomics, str	99.69
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.69
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.69
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.68
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.68
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.68
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.68
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.68
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.68
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.68
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.68
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.68
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.68
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.68
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.68
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.67
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.67
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.67
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.67
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.67
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.67
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.67
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.66
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.66
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.66
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.66
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.66
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.66
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.66
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.66
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.66
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.65
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.65
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.65
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.65
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.65
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.65
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.65
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.65
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.65
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.65
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.65
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.64
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.64
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.64
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.64
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.64
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.64
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.64
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.64
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.64
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.64
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.64
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.64
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.64
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.63
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.63
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.63
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.63
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.63
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.63
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.63
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.63
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.63
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.63
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.63
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.63
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.63
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.62
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.62
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.62
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.62
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.62
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.62
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.62
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.62
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.62
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.62
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.62
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.62
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.62
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.62
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.62
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.62
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.62
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.62
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.62
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.61
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.61
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.61
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.61
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.61
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.61
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.61
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.61
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.61
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.61
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.61
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.61
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.61
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.61
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.61
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.61
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.61
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.61
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.6
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.6
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.6
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.6
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.6
3uqc_A	286	Probable conserved transmembrane protein; structur	99.6
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.6
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.6
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.6
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.6
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.6
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.6
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.6
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.6
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.6
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.6
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.6
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.6
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.6
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.6
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.59
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.59
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.59
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.59
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.59
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.59
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.59
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.59
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.59
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.59
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.59
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.59
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.59
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.59
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.58
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.58
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.58
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.58
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.58
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.58
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.58
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.58
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.58
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.58
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.57
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.57
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.57
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.57
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.57
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.57
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.56
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.56
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.56
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.56
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.56
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.56
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.56
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.56
3bhy_A	283	Death-associated protein kinase 3; death associate	99.55
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.55
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.55
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.55
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.55
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.55
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.55
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.54
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.54
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.54
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.54
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.53
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.53
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.53
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.53
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.53
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.53
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.52
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.52
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.51
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.51
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.5
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.5
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.48
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.48
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.46
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.43
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.43
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.38
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.21
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.63
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.83
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.74
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.09
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	94.32
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	93.76
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	93.47
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	93.04
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	92.77
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	92.7
3ats_A	357	Putative uncharacterized protein; hypothetical pro	92.68
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	92.13
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	92.03
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	90.85
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	90.45
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	90.17
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	90.01
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	89.94
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	89.33
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	89.26
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	88.89
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	88.77
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	87.47
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	84.17
3mes_A	424	Choline kinase; malaria, structural genomics, stru	84.11

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.93  E-value=2.4e-27  Score=172.46  Aligned_cols=97  Identities=29%  Similarity=0.478  Sum_probs=76.4

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc---------cc-----c-----CchhHHHHHH--------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT-----N-----DTNSILRFLL--------------------   65 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~-----~-----~~~~~~~~~~--------------------   65 (127)
                      ....++|++.++||+|+||+||+|+++.         +.     .     ....|+.++.                    
T Consensus        28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~  107 (311)
T 4aw0_A           28 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL  107 (311)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CCCccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            3456789999999999999999999976         00     0     0113333333                    


Q ss_pred             ----Hhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec----
Q psy7471          66 ----LLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK----  113 (127)
Q Consensus        66 ----~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~----  113 (127)
                          +||.+|+                        .||.|||+++|+||||||+|||++.++. +||+|||+|+..    
T Consensus       108 yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~-vKl~DFGla~~~~~~~  186 (311)
T 4aw0_A          108 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPES  186 (311)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC-EEECCCTTCEECCTTT
T ss_pred             EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCC-EEEEEcCCceecCCCC
Confidence                2777776                        7999999999999999999999999999 999999999862    


Q ss_pred             ---CcccceeeE
Q psy7471         114 ---KIKLFCDLL  122 (127)
Q Consensus       114 ---~~~~~~gt~  122 (127)
                         ...++|||.
T Consensus       187 ~~~~~~~~~GTp  198 (311)
T 4aw0_A          187 KQARANSFVGTA  198 (311)
T ss_dssp             TCCCBCCCCSCG
T ss_pred             CcccccCcccCc
Confidence               245778874

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.90  E-value=1.9e-25  Score=162.06  Aligned_cols=98  Identities=43%  Similarity=0.693  Sum_probs=76.6

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc------------c---------------------------------ccCch
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS------------I---------------------------------TNDTN   58 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~---------------------------------~~~~~   58 (127)
                      .....++|++.+.||+|+||+||+|++..            +                                 ....+
T Consensus        19 ~~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~   98 (304)
T 3ubd_A           19 EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE   98 (304)
T ss_dssp             CCCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET
T ss_pred             ccCCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence            34556789999999999999999998742            0                                 00111


Q ss_pred             hHHHHHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee--
Q psy7471          59 SILRFLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR--  112 (127)
Q Consensus        59 ~~~~~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~--  112 (127)
                      ...+++++||.+|+                        .||.|||+++|+||||||+|||++.++. +||+|||+|+.  
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~-vKl~DFGla~~~~  177 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESI  177 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSC-EEEESSEEEEC--
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCC-EEecccccceecc
Confidence            23344555787776                        7999999999999999999999999999 99999999986  


Q ss_pred             ---cCcccceeeE
Q psy7471         113 ---KKIKLFCDLL  122 (127)
Q Consensus       113 ---~~~~~~~gt~  122 (127)
                         ....++|||.
T Consensus       178 ~~~~~~~~~~GT~  190 (304)
T 3ubd_A          178 DHEKKAYSFCGTV  190 (304)
T ss_dssp             ---CCCCSCCCCG
T ss_pred             CCCccccccccCc
Confidence               2345678874

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.90  E-value=1.4e-24  Score=160.09  Aligned_cols=96  Identities=25%  Similarity=0.413  Sum_probs=69.5

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------ccc---C------chhHHHHHHH---------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN---D------TNSILRFLLL---------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~---~------~~~~~~~~~~---------------------   66 (127)
                      ..+++|++.+.||+|+||+||+|+++.         +..   .      ...|+.++..                     
T Consensus        21 ~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi  100 (350)
T 4b9d_A           21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYI  100 (350)
T ss_dssp             SCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence            357899999999999999999999875         110   0      1134444433                     


Q ss_pred             ---hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceecC---
Q psy7471          67 ---LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARKK---  114 (127)
Q Consensus        67 ---~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~~---  114 (127)
                         ||.+|+                          .||.|||+++|+||||||+|||++.++. +||+|||+|+...   
T Consensus       101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~-vKl~DFGla~~~~~~~  179 (350)
T 4b9d_A          101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT-VQLGDFGIARVLNSTV  179 (350)
T ss_dssp             EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCC-EEECSTTEESCCCHHH
T ss_pred             EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCC-EEEcccccceeecCCc
Confidence               666665                          7999999999999999999999999999 9999999998732   


Q ss_pred             --cccceeeE
Q psy7471         115 --IKLFCDLL  122 (127)
Q Consensus       115 --~~~~~gt~  122 (127)
                        ..++|||.
T Consensus       180 ~~~~~~~GT~  189 (350)
T 4b9d_A          180 ELARACIGTP  189 (350)
T ss_dssp             HHHHHHHSCC
T ss_pred             ccccccCCCc
Confidence              34567764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.90  E-value=4.8e-24  Score=154.84  Aligned_cols=92  Identities=23%  Similarity=0.416  Sum_probs=73.2

Q ss_pred             CCCCCcccCCCeEEEEEeceeCCceEEEEEEcc------cc--c-Cch------hHHHHHH-------------------
Q psy7471          20 SGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS------IT--N-DTN------SILRFLL-------------------   65 (127)
Q Consensus        20 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~--~-~~~------~~~~~~~-------------------   65 (127)
                      ....|++..+++++.+.||+|+||+||+|+++.      +.  . ..+      .|..++.                   
T Consensus        27 ~~~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  106 (307)
T 3omv_A           27 SSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL  106 (307)
T ss_dssp             --CCCBCCTTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSC
T ss_pred             CCcCcEEcHHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeE
Confidence            445689999999999999999999999999876      10  0 111      2222222                   


Q ss_pred             ----Hhhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          66 ----LLLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        66 ----~~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                          +||.+|+                         .||.|||+++|+||||||+|||++.++. +||+|||+|+.
T Consensus       107 ~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~-~Ki~DFGla~~  181 (307)
T 3omv_A          107 AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLT-VKIGDFGLATV  181 (307)
T ss_dssp             EEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEE-EEECCCSSCBC
T ss_pred             EEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCc-EEEeeccCcee
Confidence                2677766                         7999999999999999999999999988 99999999986

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.90  E-value=1.2e-23  Score=154.96  Aligned_cols=93  Identities=31%  Similarity=0.439  Sum_probs=75.5

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------c-------ccCchhHHHHHHH------------------------hh
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------I-------TNDTNSILRFLLL------------------------LL   68 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~-------~~~~~~~~~~~~~------------------------~~   68 (127)
                      +.|++.+.||+|+||+||+|+++.         +       ......|+.++..                        ||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            569999999999999999999975         1       0112255666554                        67


Q ss_pred             cchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec-----Cccccee
Q psy7471          69 CAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK-----KIKLFCD  120 (127)
Q Consensus        69 ~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~-----~~~~~~g  120 (127)
                      .+|+                       .||.|||+++|+||||||+|||++.++. +||+|||+|+..     ...++||
T Consensus       154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~-vKl~DFGla~~~~~~~~~~~~~~G  232 (346)
T 4fih_A          154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKSLVG  232 (346)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC-EEECCCTTCEECCSSSCCBCCCCS
T ss_pred             CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCC-EEEecCcCceecCCCCCccccccc
Confidence            7765                       7999999999999999999999999999 999999999872     2356788


Q ss_pred             eE
Q psy7471         121 LL  122 (127)
Q Consensus       121 t~  122 (127)
                      |.
T Consensus       233 Tp  234 (346)
T 4fih_A          233 TP  234 (346)
T ss_dssp             CG
T ss_pred             Cc
Confidence            74

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.90  E-value=5.6e-25  Score=173.14  Aligned_cols=99  Identities=30%  Similarity=0.482  Sum_probs=78.2

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc---------c-----c-cCc----hhHH----------------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------I-----T-NDT----NSIL----------------------   61 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~-----~-~~~----~~~~----------------------   61 (127)
                      ...+.+++|++.++||+|+||+||+|+++.         +     . ...    ..+.                      
T Consensus       183 ~~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~  262 (689)
T 3v5w_A          183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH  262 (689)
T ss_dssp             TCCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE
T ss_pred             CCCCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE
Confidence            346778999999999999999999999976         0     0 000    0111                      


Q ss_pred             -----HHHHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          62 -----RFLLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        62 -----~~~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           +++++||.+|+                        .||.|||+++|+||||||+|||++.++. +||+|||+|+.
T Consensus       263 ~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~-vKL~DFGlA~~  341 (689)
T 3v5w_A          263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH-VRISDLGLACD  341 (689)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             ECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCC-EEecccceeee
Confidence                 11223777776                        8999999999999999999999999999 99999999987


Q ss_pred             ---cCcccceeeE
Q psy7471         113 ---KKIKLFCDLL  122 (127)
Q Consensus       113 ---~~~~~~~gt~  122 (127)
                         ....++|||.
T Consensus       342 ~~~~~~~t~~GTp  354 (689)
T 3v5w_A          342 FSKKKPHASVGTH  354 (689)
T ss_dssp             CSSCCCCSCCSCG
T ss_pred             cCCCCCCCccCCc
Confidence               3456788884

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.89  E-value=8.7e-25  Score=160.45  Aligned_cols=87  Identities=28%  Similarity=0.386  Sum_probs=69.1

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------cc--cCchhHH------------------------HHHHHhhcc
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------IT--NDTNSIL------------------------RFLLLLLCA   70 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--~~~~~~~------------------------~~~~~~~~~   70 (127)
                      ...+.|++.++||+|+||+||+|+++.         +.  .....|+                        +++++||.+
T Consensus        55 ~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  134 (336)
T 4g3f_A           55 EEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG  134 (336)
T ss_dssp             BTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             cchhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence            345779999999999999999999975         00  0111233                        334447777


Q ss_pred             hh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          71 GD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        71 g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+                        .||.|||+++|+||||||+|||++.++.++||+|||+|+.
T Consensus       135 g~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~  200 (336)
T 4g3f_A          135 GSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALC  200 (336)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEE
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeE
Confidence            76                        7999999999999999999999998863399999999986

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.89  E-value=2.9e-23  Score=156.30  Aligned_cols=93  Identities=31%  Similarity=0.439  Sum_probs=75.3

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------c-------ccCchhHHHHHHH------------------------hh
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------I-------TNDTNSILRFLLL------------------------LL   68 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~-------~~~~~~~~~~~~~------------------------~~   68 (127)
                      +.|++.+.||+|+||+||+|+++.         +       ......|+.++..                        ||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            569999999999999999999975         1       0111245555554                        77


Q ss_pred             cchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec-----Cccccee
Q psy7471          69 CAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK-----KIKLFCD  120 (127)
Q Consensus        69 ~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~-----~~~~~~g  120 (127)
                      .+|+                       .||.|||+++|+||||||+|||++.++. +||+|||+|+..     ...++||
T Consensus       231 ~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~-vKl~DFGla~~~~~~~~~~~~~~G  309 (423)
T 4fie_A          231 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKSLVG  309 (423)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCC-EEECCCTTCEECCSSCCCBCCCEE
T ss_pred             CCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCC-EEEecCccceECCCCCcccccccc
Confidence            7765                       7999999999999999999999999999 999999999872     2457788


Q ss_pred             eE
Q psy7471         121 LL  122 (127)
Q Consensus       121 t~  122 (127)
                      |.
T Consensus       310 Tp  311 (423)
T 4fie_A          310 TP  311 (423)
T ss_dssp             CT
T ss_pred             Cc
Confidence            74

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.88  E-value=2.6e-23  Score=148.94  Aligned_cols=94  Identities=32%  Similarity=0.545  Sum_probs=61.7

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cc----cC------chhHHHHHHH---------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------IT----ND------TNSILRFLLL---------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~----~~------~~~~~~~~~~---------------------   66 (127)
                      .+++|++.+.||+|+||+||+|+++.         +.    ..      ...|+.++..                     
T Consensus        11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i   90 (275)
T 3hyh_A           11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM   90 (275)
T ss_dssp             ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            35799999999999999999999875         10    01      1134444443                     


Q ss_pred             ---hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec----Cc
Q psy7471          67 ---LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK----KI  115 (127)
Q Consensus        67 ---~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~----~~  115 (127)
                         |+ +|+                        .|+.|||+++|+||||||+|||++.++. +||+|||+|+..    ..
T Consensus        91 vmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~-vkl~DFGla~~~~~~~~~  168 (275)
T 3hyh_A           91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFL  168 (275)
T ss_dssp             EEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCC-EEECCSSCC---------
T ss_pred             EEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCC-EEEeecCCCeecCCCCcc
Confidence               44 333                        8999999999999999999999999999 999999999862    23


Q ss_pred             ccceeeE
Q psy7471         116 KLFCDLL  122 (127)
Q Consensus       116 ~~~~gt~  122 (127)
                      .+.+||.
T Consensus       169 ~~~~GT~  175 (275)
T 3hyh_A          169 KTSCGSP  175 (275)
T ss_dssp             ------C
T ss_pred             CCeeECc
Confidence            4667774

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.88  E-value=2.5e-24  Score=158.96  Aligned_cols=89  Identities=27%  Similarity=0.414  Sum_probs=70.5

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc--------------ccc-Cc-------hhHHHHHHH--------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------------ITN-DT-------NSILRFLLL--------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~-~~-------~~~~~~~~~--------------   66 (127)
                      .|+++.++|++.+.||+|+||+||+|++..              +.. ..       ..|..++..              
T Consensus        58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~  137 (353)
T 4ase_A           58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC  137 (353)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence            467888999999999999999999998764              000 00       123333322              


Q ss_pred             ------------hhcchh----------------------------------------HHHHHHHHCCcEecCCCCCCEE
Q psy7471          67 ------------LLCAGD----------------------------------------ACLTFLHRHGVVYRDLKLDNIL   94 (127)
Q Consensus        67 ------------~~~~g~----------------------------------------~al~~lH~~~iih~dlk~~nil   94 (127)
                                  ||.+|+                                        .|+.|||+++||||||||+|||
T Consensus       138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NIL  217 (353)
T 4ase_A          138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  217 (353)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcccee
Confidence                        555443                                        6899999999999999999999


Q ss_pred             EecCCCeEEEEeccccee
Q psy7471          95 LDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        95 ~~~~~~~~kl~dfg~a~~  112 (127)
                      ++.++. +||+|||+|+.
T Consensus       218 l~~~~~-vKi~DFGlar~  234 (353)
T 4ase_A          218 LSEKNV-VKICDFGLARD  234 (353)
T ss_dssp             ECGGGC-EEECCCGGGSC
T ss_pred             eCCCCC-EEECcchhhhh
Confidence            999998 99999999986

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.86  E-value=2.2e-22  Score=145.07  Aligned_cols=91  Identities=29%  Similarity=0.416  Sum_probs=69.2

Q ss_pred             eEEEEEeceeCCceEEEEEEcc---------cc--c-C------chhHHHHHH---------------------------
Q psy7471          31 FHFIKVLGKGSFGKELFGHYRS---------IT--N-D------TNSILRFLL---------------------------   65 (127)
Q Consensus        31 ~~~~~~lg~G~fg~V~~~~~~~---------~~--~-~------~~~~~~~~~---------------------------   65 (127)
                      |++.+.||+|+||+||+|+++.         +.  . .      ...|+.++.                           
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            4888999999999999999976         00  0 0      012333332                           


Q ss_pred             -Hhhcchh------------------------HHHHHHHHCC--cEecCCCCCCEEEec-CCCeEEEEeccccee---cC
Q psy7471          66 -LLLCAGD------------------------ACLTFLHRHG--VVYRDLKLDNILLDA-GGSLLKLADFGRCAR---KK  114 (127)
Q Consensus        66 -~~~~~g~------------------------~al~~lH~~~--iih~dlk~~nil~~~-~~~~~kl~dfg~a~~---~~  114 (127)
                       +||.+|+                        .||.|||+++  |+||||||+|||++. ++. +||+|||+|+.   ..
T Consensus       108 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~-vKl~DFGla~~~~~~~  186 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGS-VKIGDLGLATLKRASF  186 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSC-EEECCTTGGGGCCTTS
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCC-EEEEeCcCCEeCCCCc
Confidence             3666665                        7999999998  999999999999985 677 99999999986   33


Q ss_pred             cccceeeE
Q psy7471         115 IKLFCDLL  122 (127)
Q Consensus       115 ~~~~~gt~  122 (127)
                      ..+++||.
T Consensus       187 ~~~~~GTp  194 (290)
T 3fpq_A          187 AKAVIGTP  194 (290)
T ss_dssp             BEESCSSC
T ss_pred             cCCcccCc
Confidence            45677875

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.86  E-value=3.2e-22  Score=145.27  Aligned_cols=89  Identities=26%  Similarity=0.413  Sum_probs=70.2

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc--------------ccc--------CchhHHHHHHH--------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------------ITN--------DTNSILRFLLL--------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~--------~~~~~~~~~~~--------------   66 (127)
                      .+++..+++++.+.||+|+||+||+|++..              +..        ....|..++..              
T Consensus        20 ~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~   99 (308)
T 4gt4_A           20 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT   99 (308)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence            356788999999999999999999998742              100        01134444433              


Q ss_pred             ----------hhcchh----------------------------------------HHHHHHHHCCcEecCCCCCCEEEe
Q psy7471          67 ----------LLCAGD----------------------------------------ACLTFLHRHGVVYRDLKLDNILLD   96 (127)
Q Consensus        67 ----------~~~~g~----------------------------------------~al~~lH~~~iih~dlk~~nil~~   96 (127)
                                ||.+|+                                        .|+.|||+++|+||||||+|||++
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~  179 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY  179 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence                      555543                                        689999999999999999999999


Q ss_pred             cCCCeEEEEeccccee
Q psy7471          97 AGGSLLKLADFGRCAR  112 (127)
Q Consensus        97 ~~~~~~kl~dfg~a~~  112 (127)
                      .+.. +||+|||+|+.
T Consensus       180 ~~~~-~Ki~DFGlar~  194 (308)
T 4gt4_A          180 DKLN-VKISDLGLFRE  194 (308)
T ss_dssp             GGGC-EEECCSCCBCG
T ss_pred             CCCC-EEECCccccee
Confidence            9999 99999999986

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.86  E-value=6.9e-23  Score=153.32  Aligned_cols=93  Identities=27%  Similarity=0.433  Sum_probs=70.8

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------cccC---------chhHHHHHHH------------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------ITND---------TNSILRFLLL------------------------   66 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~---------~~~~~~~~~~------------------------   66 (127)
                      ++|++.+.||+|+||+||+|+++.         +...         ...|+.++..                        
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            579999999999999999999975         1000         0134444433                        


Q ss_pred             ------hhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec----
Q psy7471          67 ------LLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK----  113 (127)
Q Consensus        67 ------~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~----  113 (127)
                            ||.++.                       .||.|||+++|+||||||+|||++.++. +||+|||+|+..    
T Consensus       134 ~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~-~Ki~DFGla~~~~~~~  212 (398)
T 4b99_A          134 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE-LKIGDFGMARGLCTSP  212 (398)
T ss_dssp             EEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCC-EEECCCTTCBCC----
T ss_pred             EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCC-EEEeecceeeecccCc
Confidence                  443221                       8999999999999999999999999999 999999999852    


Q ss_pred             -----CcccceeeE
Q psy7471         114 -----KIKLFCDLL  122 (127)
Q Consensus       114 -----~~~~~~gt~  122 (127)
                           ...+++||.
T Consensus       213 ~~~~~~~~~~~GT~  226 (398)
T 4b99_A          213 AEHQYFMTEYVATR  226 (398)
T ss_dssp             ---CCCCCSSCCCC
T ss_pred             cccccccccceeCh
Confidence                 234667774

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.85  E-value=5.8e-22  Score=145.07  Aligned_cols=39  Identities=33%  Similarity=0.459  Sum_probs=34.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||+|||++.+.. +||+|||+|+.
T Consensus       169 ~gl~yLH~~~iiHRDLKp~NILl~~~~~-~Ki~DFGla~~  207 (329)
T 4aoj_A          169 AGMVYLAGLHFVHRDLATRNCLVGQGLV-VKIGDFGMSRD  207 (329)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEEETTTE-EEECCCC----
T ss_pred             HHHHHHhcCCeecccccHhhEEECCCCc-EEEccccccee
Confidence            6899999999999999999999999998 99999999986

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.85  E-value=9.6e-22  Score=142.17  Aligned_cols=39  Identities=36%  Similarity=0.649  Sum_probs=36.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.++. +||+|||+|+.
T Consensus       129 ~al~ylH~~~IiHRDlKp~NILl~~~~~-vKl~DFGla~~  167 (299)
T 4g31_A          129 EAVEFLHSKGLMHRDLKPSNIFFTMDDV-VKVGDFGLVTA  167 (299)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECTTCC-EEECCCCCC--
T ss_pred             HHHHHHHHCcCccccCcHHHeEECCCCc-EEEccCcccee
Confidence            6899999999999999999999999999 99999999986

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.85  E-value=1.2e-21  Score=141.82  Aligned_cols=89  Identities=25%  Similarity=0.406  Sum_probs=67.7

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc--------------cccCc-h------hHHHHHHH---------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------------ITNDT-N------SILRFLLL---------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~~~-~------~~~~~~~~---------------   66 (127)
                      .+.+..++|.+.+.||+|+||+||+|++..              +.... .      .|..++..               
T Consensus         7 ~~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~   86 (299)
T 4asz_A            7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE   86 (299)
T ss_dssp             CCBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             hcccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee
Confidence            346778899999999999999999998752              11111 1      23333322               


Q ss_pred             ---------hhcchh-------------------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC
Q psy7471          67 ---------LLCAGD-------------------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS  100 (127)
Q Consensus        67 ---------~~~~g~-------------------------------------~al~~lH~~~iih~dlk~~nil~~~~~~  100 (127)
                               ||.+|+                                     .|+.|||+++|+||||||+|||++.+..
T Consensus        87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~  166 (299)
T 4asz_A           87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL  166 (299)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCc
Confidence                     555543                                     6899999999999999999999999998


Q ss_pred             eEEEEeccccee
Q psy7471         101 LLKLADFGRCAR  112 (127)
Q Consensus       101 ~~kl~dfg~a~~  112 (127)
                       +||+|||+|+.
T Consensus       167 -~Ki~DFGla~~  177 (299)
T 4asz_A          167 -VKIGDFGMSRD  177 (299)
T ss_dssp             -EEECCCSCHHH
T ss_pred             -EEECCccccee
Confidence             99999999986

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.84  E-value=7.2e-21  Score=137.65  Aligned_cols=83  Identities=29%  Similarity=0.466  Sum_probs=66.0

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc-------cccCch----h------------------------------HHHHHHHh
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS-------ITNDTN----S------------------------------ILRFLLLL   67 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~~~----~------------------------------~~~~~~~~   67 (127)
                      .+|.+.+.||+|+||+||+|++.+       +.....    .                              .++++++|
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence            468899999999999999999977       100100    1                              12233346


Q ss_pred             hcchh-----------------------HHHHHHHHC--------CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          68 LCAGD-----------------------ACLTFLHRH--------GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        68 ~~~g~-----------------------~al~~lH~~--------~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +.+|+                       .|+.|||++        +|+||||||+|||++.++. +||+|||+|+.
T Consensus        83 ~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~-~Ki~DFGla~~  157 (303)
T 3hmm_A           83 HEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT-CCIADLGLAVR  157 (303)
T ss_dssp             CTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSC-EEECCCTTCEE
T ss_pred             CCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCC-EEEEeCCCCcc
Confidence            77666                       789999987        9999999999999999999 99999999986

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.84  E-value=3.8e-21  Score=142.25  Aligned_cols=84  Identities=24%  Similarity=0.376  Sum_probs=66.0

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc------------cccC-----chhHHHHHHH------------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS------------ITND-----TNSILRFLLL------------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~------------~~~~-----~~~~~~~~~~------------------------   66 (127)
                      .+.|++.+.||+|+||+||+|+++.            +...     ...|+.++..                        
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm   99 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM   99 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence            3679999999999999999998752            1111     1134444443                        


Q ss_pred             -hhcchh---------------------HHHHHHHHCCcEecCCCCCCEEEecC-CCeEEEEeccccee
Q psy7471          67 -LLCAGD---------------------ACLTFLHRHGVVYRDLKLDNILLDAG-GSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~---------------------~al~~lH~~~iih~dlk~~nil~~~~-~~~~kl~dfg~a~~  112 (127)
                       |+.+|+                     .||.|||+++|+||||||+|||++.+ +. +||+|||+|+.
T Consensus       100 E~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~-~kl~DFGla~~  167 (361)
T 4f9c_A          100 PYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKK-YALVDFGLAQG  167 (361)
T ss_dssp             ECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTE-EEECCCTTCEE
T ss_pred             eCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCe-EEECcCCCCcc
Confidence             555554                     79999999999999999999999987 55 99999999985

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.81  E-value=2.1e-20  Score=145.33  Aligned_cols=95  Identities=25%  Similarity=0.402  Sum_probs=72.3

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cccCc-------hhHHHHHHH------------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITNDT-------NSILRFLLL------------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~~-------~~~~~~~~~------------------------   66 (127)
                      .+++|++.+.||+|+||+||+|+++.         +....       ..|+.++..                        
T Consensus       155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E  234 (573)
T 3uto_A          155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  234 (573)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            35789999999999999999999976         11111       134444433                        


Q ss_pred             hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecC--CCeEEEEecccceecC----c
Q psy7471          67 LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAG--GSLLKLADFGRCARKK----I  115 (127)
Q Consensus        67 ~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~--~~~~kl~dfg~a~~~~----~  115 (127)
                      ||.+|+                         .||.|||+++|+||||||+|||++.+  +. +||+|||+|+...    .
T Consensus       235 ~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~-vKl~DFG~a~~~~~~~~~  313 (573)
T 3uto_A          235 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSV  313 (573)
T ss_dssp             CCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCC-EEECCCSSCEECCTTSEE
T ss_pred             ecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCC-EEEeeccceeEccCCCce
Confidence            566655                         79999999999999999999999864  66 9999999999732    2


Q ss_pred             ccceeeE
Q psy7471         116 KLFCDLL  122 (127)
Q Consensus       116 ~~~~gt~  122 (127)
                      .+.|||.
T Consensus       314 ~~~~GT~  320 (573)
T 3uto_A          314 KVTTGTA  320 (573)
T ss_dssp             EEECSSG
T ss_pred             eeeEECc
Confidence            4556663

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.81  E-value=5.7e-20  Score=135.24  Aligned_cols=99  Identities=45%  Similarity=0.857  Sum_probs=67.7

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc---------ccc----------CchhHHHHHHH----------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN----------DTNSILRFLLL----------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----------~~~~~~~~~~~----------------   66 (127)
                      ....+.+++|++.++||+|+||.||+|+++.         +..          ....+..++..                
T Consensus        16 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~   95 (353)
T 3txo_A           16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT   95 (353)
T ss_dssp             -------CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             CcCCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe
Confidence            3345788999999999999999999999875         000          01123333332                


Q ss_pred             ---------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee-
Q psy7471          67 ---------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-  112 (127)
Q Consensus        67 ---------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~-  112 (127)
                               |+.+|+                        .||.|||+++|+||||||+||+++.++. +||+|||+++. 
T Consensus        96 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~-ikL~DFG~a~~~  174 (353)
T 3txo_A           96 PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGH-CKLADFGMCKEG  174 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC-EEECCCTTCBCS
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCC-EEEccccceeec
Confidence                     444444                        7899999999999999999999999999 99999999986 


Q ss_pred             ----cCcccceee
Q psy7471         113 ----KKIKLFCDL  121 (127)
Q Consensus       113 ----~~~~~~~gt  121 (127)
                          ....++|||
T Consensus       175 ~~~~~~~~~~~gt  187 (353)
T 3txo_A          175 ICNGVTTATFCGT  187 (353)
T ss_dssp             CC---------CC
T ss_pred             ccCCccccccCCC
Confidence                223455665

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.80  E-value=5.6e-21  Score=141.66  Aligned_cols=98  Identities=39%  Similarity=0.710  Sum_probs=72.2

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc---------c----ccCchhHHHH---------------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS---------I----TNDTNSILRF---------------------------   63 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~----~~~~~~~~~~---------------------------   63 (127)
                      ..+..++|++.++||+|+||.||+|+++.         +    .........+                           
T Consensus        33 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~  112 (373)
T 2r5t_A           33 PHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD  112 (373)
T ss_dssp             TTCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS
T ss_pred             CCCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC
Confidence            45677899999999999999999999875         0    0000111111                           


Q ss_pred             ----HHHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee---
Q psy7471          64 ----LLLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR---  112 (127)
Q Consensus        64 ----~~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~---  112 (127)
                          +++|+.+|+                        .||.|||+++|+||||||+||+++.++. +||+|||+++.   
T Consensus       113 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~-ikL~DFG~a~~~~~  191 (373)
T 2r5t_A          113 KLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH-IVLTDFGLCKENIE  191 (373)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC-EEECCCCBCGGGBC
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCC-EEEeeCcccccccc
Confidence                122444544                        7899999999999999999999999999 99999999986   


Q ss_pred             --cCcccceeeE
Q psy7471         113 --KKIKLFCDLL  122 (127)
Q Consensus       113 --~~~~~~~gt~  122 (127)
                        ....+++||.
T Consensus       192 ~~~~~~~~~gt~  203 (373)
T 2r5t_A          192 HNSTTSTFCGTP  203 (373)
T ss_dssp             CCCCCCSBSCCC
T ss_pred             CCCccccccCCc
Confidence              2234566664

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.79  E-value=1.5e-19  Score=135.00  Aligned_cols=99  Identities=37%  Similarity=0.785  Sum_probs=74.5

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc---------cc----cC------chhHHHHHHH-----------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT----ND------TNSILRFLLL-----------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~----~~------~~~~~~~~~~-----------------   66 (127)
                      ...+.+++|++.++||+|+||+||+|+++.         +.    ..      ...+..++..                 
T Consensus        46 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~  125 (396)
T 4dc2_A           46 SSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE  125 (396)
T ss_dssp             ---CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC
Confidence            456778999999999999999999999876         00    00      1134444432                 


Q ss_pred             --------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee--
Q psy7471          67 --------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR--  112 (127)
Q Consensus        67 --------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~--  112 (127)
                              |+.+|+                        .||.|||+++|+||||||+|||++.++. +||+|||+++.  
T Consensus       126 ~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~-ikL~DFGla~~~~  204 (396)
T 4dc2_A          126 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGL  204 (396)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC-EEECCCTTCBCCC
T ss_pred             CEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCC-EEEeecceeeecc
Confidence                    444444                        7899999999999999999999999999 99999999986  


Q ss_pred             ---cCcccceeeE
Q psy7471         113 ---KKIKLFCDLL  122 (127)
Q Consensus       113 ---~~~~~~~gt~  122 (127)
                         ....++|||.
T Consensus       205 ~~~~~~~~~~gt~  217 (396)
T 4dc2_A          205 RPGDTTSTFCGTP  217 (396)
T ss_dssp             CTTCCBCCCCBCG
T ss_pred             cCCCccccccCCc
Confidence               2345666663

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.79  E-value=2.1e-20  Score=137.61  Aligned_cols=98  Identities=45%  Similarity=0.827  Sum_probs=70.9

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc---------cc-----c-C----chhHHHHHHH-----------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT-----N-D----TNSILRFLLL-----------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~-----~-~----~~~~~~~~~~-----------------   66 (127)
                      ...+..++|++.++||+|+||.||+|+++.         +.     . .    ...|..++..                 
T Consensus        14 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~   93 (353)
T 2i0e_A           14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM   93 (353)
T ss_dssp             -----CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECS
T ss_pred             cCCCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcC
Confidence            345778999999999999999999999875         00     0 0    0122222221                 


Q ss_pred             --------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec-
Q psy7471          67 --------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK-  113 (127)
Q Consensus        67 --------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~-  113 (127)
                              |+.+|+                        .||.|||+++|+||||||+||+++.++. +||+|||+++.. 
T Consensus        94 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~-vkL~DFG~a~~~~  172 (353)
T 2i0e_A           94 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENI  172 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC-EEECCCTTCBCCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCc-EEEEeCCcccccc
Confidence                    444444                        7899999999999999999999999999 999999999862 


Q ss_pred             ----Ccccceee
Q psy7471         114 ----KIKLFCDL  121 (127)
Q Consensus       114 ----~~~~~~gt  121 (127)
                          ...+++||
T Consensus       173 ~~~~~~~~~~gt  184 (353)
T 2i0e_A          173 WDGVTTKTFCGT  184 (353)
T ss_dssp             CTTCCBCCCCSC
T ss_pred             cCCcccccccCC
Confidence                23455665

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.78  E-value=3.1e-20  Score=146.59  Aligned_cols=98  Identities=44%  Similarity=0.789  Sum_probs=71.8

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc---------cc-----cC-----chhHHHHHH-------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT-----ND-----TNSILRFLL-------------------   65 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~-----~~-----~~~~~~~~~-------------------   65 (127)
                      ..+.+++|++.++||+|+||.||+|+++.         +.     ..     ...|..++.                   
T Consensus       336 ~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~  415 (674)
T 3pfq_A          336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD  415 (674)
T ss_dssp             ----CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS
T ss_pred             ccccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC
Confidence            45677899999999999999999999876         00     00     012222222                   


Q ss_pred             ------Hhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee---
Q psy7471          66 ------LLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR---  112 (127)
Q Consensus        66 ------~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~---  112 (127)
                            +|+.+|+                        .||.|||+++|+||||||+|||++.++. +||+|||+++.   
T Consensus       416 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~-ikL~DFGla~~~~~  494 (674)
T 3pfq_A          416 RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIW  494 (674)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSC-EEECCCTTCEECCC
T ss_pred             EEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCc-EEEeecceeecccc
Confidence                  2555544                        7899999999999999999999999999 99999999986   


Q ss_pred             --cCcccceeeE
Q psy7471         113 --KKIKLFCDLL  122 (127)
Q Consensus       113 --~~~~~~~gt~  122 (127)
                        ....+++||.
T Consensus       495 ~~~~~~~~~GT~  506 (674)
T 3pfq_A          495 DGVTTKTFCGTP  506 (674)
T ss_dssp             TTCCBCCCCSCS
T ss_pred             CCcccccccCCC
Confidence              2234566663

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.77  E-value=8.6e-19  Score=132.42  Aligned_cols=86  Identities=35%  Similarity=0.614  Sum_probs=69.0

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------c----------ccCchhHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------I----------TNDTNSILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~----------~~~~~~~~~~~~~--------------------   66 (127)
                      +..++|++.++||+|+||+||+|+++.         +          ......+..++..                    
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  150 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY  150 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence            456889999999999999999999876         0          0011234444433                    


Q ss_pred             ----hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                          |+.+|+                         .|+.|||+++|+||||||+|||++.++. +||+|||+++.
T Consensus       151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~-vkL~DFGla~~  224 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH-IRLADFGSCLK  224 (437)
T ss_dssp             EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCC-EEEcchhhhhh
Confidence                455544                         7899999999999999999999999999 99999999986

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.77  E-value=9.2e-19  Score=131.29  Aligned_cols=87  Identities=36%  Similarity=0.639  Sum_probs=69.9

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc---------c----------ccCchhHHHHHHH-------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS---------I----------TNDTNSILRFLLL-------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~----------~~~~~~~~~~~~~-------------------   66 (127)
                      .+..++|++.++||+|+||.||+|+++.         +          ......|..++..                   
T Consensus        65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~  144 (410)
T 3v8s_A           65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL  144 (410)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence            3566899999999999999999999975         0          0011134444443                   


Q ss_pred             -----hhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.+|+                       .||.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       145 ~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~-ikL~DFG~a~~  217 (410)
T 3v8s_A          145 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMK  217 (410)
T ss_dssp             EEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCC-EEEeccceeEe
Confidence                 555554                       7899999999999999999999999999 99999999986

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.77  E-value=6.2e-19  Score=128.98  Aligned_cols=95  Identities=40%  Similarity=0.798  Sum_probs=72.0

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------c------ccC----chhHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------I------TND----TNSILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~------~~~----~~~~~~~~~~--------------------   66 (127)
                      +.+++|++.+.||+|+||.||+|+++.         +      ...    ...|..++..                    
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence            567899999999999999999999875         0      000    0123333322                    


Q ss_pred             ----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec-----
Q psy7471          67 ----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK-----  113 (127)
Q Consensus        67 ----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~-----  113 (127)
                          |+.+|+                        .||.|||+++|+||||||+||+++.++. +||+|||+++..     
T Consensus        82 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~-vkL~DFG~a~~~~~~~~  160 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGA  160 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC-EEECCCTTCBCSCCTTC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCC-EEEeeccchhhcccCCC
Confidence                444443                        7899999999999999999999999999 999999999862     


Q ss_pred             Ccccceee
Q psy7471         114 KIKLFCDL  121 (127)
Q Consensus       114 ~~~~~~gt  121 (127)
                      ...+++||
T Consensus       161 ~~~~~~gt  168 (337)
T 1o6l_A          161 TMKTFCGT  168 (337)
T ss_dssp             CBCCCEEC
T ss_pred             cccccccC
Confidence            23455665

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.77  E-value=9.9e-19  Score=128.33  Aligned_cols=97  Identities=51%  Similarity=0.865  Sum_probs=71.5

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc---------cc------cC----chhHHHHHHH------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT------ND----TNSILRFLLL------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~------~~----~~~~~~~~~~------------------   66 (127)
                      ..+..++|++.++||+|+||.||+|+++.         +.      ..    ...+..++..                  
T Consensus        12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~   91 (345)
T 1xjd_A           12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   91 (345)
T ss_dssp             ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence            45778999999999999999999999875         00      00    1123333332                  


Q ss_pred             -------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec--
Q psy7471          67 -------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK--  113 (127)
Q Consensus        67 -------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~--  113 (127)
                             |+.+|+                        .|+.|||+++|+||||||+||+++.++. +||+|||+++..  
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~-vkL~DFG~a~~~~~  170 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH-IKIADFGMCKENML  170 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC-EEECCCTTCBCCCC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCC-EEEeEChhhhhccc
Confidence                   444444                        7899999999999999999999999998 999999999862  


Q ss_pred             ---Ccccceee
Q psy7471         114 ---KIKLFCDL  121 (127)
Q Consensus       114 ---~~~~~~gt  121 (127)
                         ...+++||
T Consensus       171 ~~~~~~~~~gt  181 (345)
T 1xjd_A          171 GDAKTNTFCGT  181 (345)
T ss_dssp             TTCCBCCCCSC
T ss_pred             CCCcccCCCCC
Confidence               23455665

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.76  E-value=1e-18  Score=130.06  Aligned_cols=90  Identities=32%  Similarity=0.585  Sum_probs=71.1

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc------cc--------c-----CchhHHHHHHH----------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS------IT--------N-----DTNSILRFLLL----------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~--------~-----~~~~~~~~~~~----------------   66 (127)
                      ....+..++|++.+.||+|+||.||+|+++.      +.        .     ....|+.++..                
T Consensus         8 ~~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~   87 (384)
T 4fr4_A            8 ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE   87 (384)
T ss_dssp             CCCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             CCCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            3456788999999999999999999999876      00        0     01133444433                


Q ss_pred             --------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                              |+.+|+                        .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~-vkL~DFG~a~~  164 (384)
T 4fr4_A           88 EDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGH-VHITDFNIAAM  164 (384)
T ss_dssp             SEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCC-EEEeccceeee
Confidence                    444443                        7899999999999999999999999999 99999999986

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.76  E-value=1.9e-18  Score=129.64  Aligned_cols=87  Identities=34%  Similarity=0.621  Sum_probs=69.4

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc---------c----------ccCchhHHHHHHH-------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS---------I----------TNDTNSILRFLLL-------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~----------~~~~~~~~~~~~~-------------------   66 (127)
                      .+..++|++.++||+|+||+||+|+++.         +          ......+..++..                   
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~  136 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL  136 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence            3566899999999999999999999875         0          0111234444433                   


Q ss_pred             -----hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.+|+                         .|+.|||+++|+||||||+|||++.++. +||+|||+++.
T Consensus       137 ~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~-vkL~DFGla~~  211 (412)
T 2vd5_A          137 YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGH-IRLADFGSCLK  211 (412)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCC-EEEeechhhee
Confidence                 444544                         7899999999999999999999999999 99999999987

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.76  E-value=8.3e-20  Score=137.55  Aligned_cols=89  Identities=37%  Similarity=0.795  Sum_probs=66.6

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc---------cc----cCch------hH-----------------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT----NDTN------SI-----------------------   60 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~----~~~~------~~-----------------------   60 (127)
                      ...+..++|++.+.||+|+||.||+|+++.         +.    ....      .+                       
T Consensus       142 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~  221 (446)
T 4ejn_A          142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD  221 (446)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT
T ss_pred             ccCCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC
Confidence            345677899999999999999999999865         00    0000      01                       


Q ss_pred             -HHHHHHhhcchh------------------------HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          61 -LRFLLLLLCAGD------------------------ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        61 -~~~~~~~~~~g~------------------------~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       .+++++|+.+|+                        .||.|||+ ++|+||||||+|||++.++. +||+|||+++.
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~-~kl~DFG~a~~  298 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKE  298 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSC-EEECCCCCCCT
T ss_pred             EEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCC-EEEccCCCcee
Confidence             112222454443                        78999998 99999999999999999998 99999999875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.76  E-value=1.3e-18  Score=126.25  Aligned_cols=96  Identities=35%  Similarity=0.642  Sum_probs=71.9

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc---------cc-------cC---chhHHHHHHH-------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT-------ND---TNSILRFLLL-------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~-------~~---~~~~~~~~~~-------------------   66 (127)
                      .+.+++|++.+.||+|+||.||+|+.+.         +.       ..   ...|..++..                   
T Consensus         2 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~   81 (318)
T 1fot_A            2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQI   81 (318)
T ss_dssp             -CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEE
T ss_pred             CCChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEE
Confidence            3567899999999999999999999875         00       00   0123333322                   


Q ss_pred             -----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec--Cc
Q psy7471          67 -----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK--KI  115 (127)
Q Consensus        67 -----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~--~~  115 (127)
                           |+.+|+                        .|+.|||+++|+||||||+||+++.++. +||+|||+++..  ..
T Consensus        82 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~-~kL~Dfg~a~~~~~~~  160 (318)
T 1fot_A           82 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH-IKITDFGFAKYVPDVT  160 (318)
T ss_dssp             EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSC-EEECCCSSCEECSSCB
T ss_pred             EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCC-EEEeecCcceecCCcc
Confidence                 444443                        7899999999999999999999999999 999999999873  23


Q ss_pred             ccceee
Q psy7471         116 KLFCDL  121 (127)
Q Consensus       116 ~~~~gt  121 (127)
                      .+++||
T Consensus       161 ~~~~gt  166 (318)
T 1fot_A          161 YTLCGT  166 (318)
T ss_dssp             CCCCSC
T ss_pred             ccccCC
Confidence            445555

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.76  E-value=1.5e-18  Score=127.12  Aligned_cols=88  Identities=40%  Similarity=0.826  Sum_probs=69.2

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc---------cc----cCc------hhHHHHHHH------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT----NDT------NSILRFLLL------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~----~~~------~~~~~~~~~------------------   66 (127)
                      ..+.+++|++.+.||+|+||.||+|+++.         +.    ...      ..|..++..                  
T Consensus         4 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~   83 (345)
T 3a8x_A            4 DPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES   83 (345)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             CCCchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC
Confidence            34678899999999999999999999875         10    011      123333332                  


Q ss_pred             -------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+.+|+                        .||.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus        84 ~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~-~kL~DFG~a~~  159 (345)
T 3a8x_A           84 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKE  159 (345)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC-EEECCGGGCBC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCC-EEEEecccccc
Confidence                   444443                        7899999999999999999999999998 99999999986

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.75  E-value=3.1e-18  Score=125.75  Aligned_cols=96  Identities=32%  Similarity=0.599  Sum_probs=72.4

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc--------cc--------c---CchhHHHHHHH-------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS--------IT--------N---DTNSILRFLLL-------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~--------~---~~~~~~~~~~~-------------------   66 (127)
                      ...+++|++.+.||+|+||.||+|+++.        ..        .   ....|..++..                   
T Consensus        37 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  116 (350)
T 1rdq_E           37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNL  116 (350)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CCCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence            4567899999999999999999999875        00        0   00123333322                   


Q ss_pred             -----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec--Cc
Q psy7471          67 -----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK--KI  115 (127)
Q Consensus        67 -----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~--~~  115 (127)
                           |+.+|+                        .||.|||+++|+||||||+||+++.++. +||+|||+++..  ..
T Consensus       117 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~-~kL~DFg~a~~~~~~~  195 (350)
T 1rdq_E          117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRT  195 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC-EEECCCTTCEECSSCB
T ss_pred             EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCC-EEEcccccceeccCCc
Confidence                 444443                        7899999999999999999999999999 999999999873  23


Q ss_pred             ccceee
Q psy7471         116 KLFCDL  121 (127)
Q Consensus       116 ~~~~gt  121 (127)
                      .+++||
T Consensus       196 ~~~~gt  201 (350)
T 1rdq_E          196 WTLCGT  201 (350)
T ss_dssp             CCCEEC
T ss_pred             ccccCC
Confidence            455665

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.74  E-value=2.8e-18  Score=124.96  Aligned_cols=88  Identities=28%  Similarity=0.542  Sum_probs=68.7

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc---------ccc---Cc------hhHHHHHHH-------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN---DT------NSILRFLLL-------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~---~~------~~~~~~~~~-------------------   66 (127)
                      .....++|++.+.||+|+||.||+|++..         +..   ..      ..|..++..                   
T Consensus        10 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~   89 (328)
T 3fe3_A           10 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL   89 (328)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             cCCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEE
Confidence            34567899999999999999999999864         100   11      133444433                   


Q ss_pred             -----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.+|+                        .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~-~kl~DFG~a~~  163 (328)
T 3fe3_A           90 YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN-IKIADFGFSNE  163 (328)
T ss_dssp             EEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC-EEECSTTCCGG
T ss_pred             EEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCC-EEEeeccCcee
Confidence                 444443                        7899999999999999999999999999 99999999875

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.74  E-value=7.4e-18  Score=122.28  Aligned_cols=90  Identities=38%  Similarity=0.682  Sum_probs=66.6

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc------------ccc-----------CchhHHHHHHH------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS------------ITN-----------DTNSILRFLLL------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~~-----------~~~~~~~~~~~------------   66 (127)
                      ....+..++|++.+.||+|+||.||+|+...            +..           ....|..++..            
T Consensus        10 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   89 (327)
T 3a62_A           10 GPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYA   89 (327)
T ss_dssp             ---CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEE
T ss_pred             CCCCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEE
Confidence            3456778999999999999999999998841            100           01134444443            


Q ss_pred             ------------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccc
Q psy7471          67 ------------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC  110 (127)
Q Consensus        67 ------------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a  110 (127)
                                  |+.+++                        .|+.|||+++|+||||||+||+++.++. +||+|||++
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~-~kl~Dfg~~  168 (327)
T 3a62_A           90 FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLC  168 (327)
T ss_dssp             EECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSC-EEECCCSCC
T ss_pred             EEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCc-EEEEeCCcc
Confidence                        343333                        7899999999999999999999999998 999999998


Q ss_pred             ee
Q psy7471         111 AR  112 (127)
Q Consensus       111 ~~  112 (127)
                      +.
T Consensus       169 ~~  170 (327)
T 3a62_A          169 KE  170 (327)
T ss_dssp             --
T ss_pred             cc
Confidence            75

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.73  E-value=8.8e-19  Score=127.08  Aligned_cols=90  Identities=27%  Similarity=0.417  Sum_probs=68.7

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc------------ccc--Cch------hHHHHHHH---------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS------------ITN--DTN------SILRFLLL---------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~~--~~~------~~~~~~~~---------------   66 (127)
                      ...++..++|++.+.||+|+||.||+|+++.            +..  ...      .|..++..               
T Consensus        42 ~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  121 (325)
T 3kul_A           42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR  121 (325)
T ss_dssp             -CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred             hccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            3456778899999999999999999999853            110  111      22222222               


Q ss_pred             ---------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                               |+.+++                         .|+.|||+++|+|+||||.||+++.++. ++|+|||+++.
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~~  200 (325)
T 3kul_A          122 GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV-CKVSDFGLSRV  200 (325)
T ss_dssp             GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC-EEECCCSSCEE
T ss_pred             CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCC-EEECCCCcccc
Confidence                     343433                         7899999999999999999999999998 99999999986

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.73  E-value=8.6e-19  Score=126.79  Aligned_cols=90  Identities=21%  Similarity=0.461  Sum_probs=68.0

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc-------cccCc----hhHH-----------------------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------ITNDT----NSIL-----------------------------   61 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~~----~~~~-----------------------------   61 (127)
                      ..+.+.+++|++.+.||+|+||.||+|++.+       +....    ..+.                             
T Consensus         6 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   85 (336)
T 3g2f_A            6 SEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM   85 (336)
T ss_dssp             ---CCCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred             cCCCcChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence            3456789999999999999999999998765       00000    0111                             


Q ss_pred             --HHHHHhhcchh-----------------------HHHHHHHHC---------CcEecCCCCCCEEEecCCCeEEEEec
Q psy7471          62 --RFLLLLLCAGD-----------------------ACLTFLHRH---------GVVYRDLKLDNILLDAGGSLLKLADF  107 (127)
Q Consensus        62 --~~~~~~~~~g~-----------------------~al~~lH~~---------~iih~dlk~~nil~~~~~~~~kl~df  107 (127)
                        +++++|+.+|+                       .|+.|||+.         +|+||||||+||+++.++. +||+||
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~-~kL~DF  164 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT-CVISDF  164 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSC-EEECCC
T ss_pred             eEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCc-EEEeec
Confidence              12223444444                       789999999         9999999999999999998 999999


Q ss_pred             cccee
Q psy7471         108 GRCAR  112 (127)
Q Consensus       108 g~a~~  112 (127)
                      |+++.
T Consensus       165 G~a~~  169 (336)
T 3g2f_A          165 GLSMR  169 (336)
T ss_dssp             TTCEE
T ss_pred             cceee
Confidence            99976

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.72  E-value=1.5e-17  Score=122.90  Aligned_cols=92  Identities=27%  Similarity=0.422  Sum_probs=72.8

Q ss_pred             CCCCCcccCCCeEEEEEeceeCCceEEEEEEcc---------cc--------cCchhHHHHHHH----------------
Q psy7471          20 SGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT--------NDTNSILRFLLL----------------   66 (127)
Q Consensus        20 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--------~~~~~~~~~~~~----------------   66 (127)
                      ....|.+..++|++.+.||+|+||.||+|+++.         ..        .....|..++..                
T Consensus       105 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  184 (377)
T 3cbl_A          105 PKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK  184 (377)
T ss_dssp             CCCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             cccccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC
Confidence            455678888999999999999999999999974         00        011134444332                


Q ss_pred             --------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                              |+.+|+                         .|+.|||+++++||||||+||+++.++. +||+|||+++.
T Consensus       185 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~-~kl~DfG~s~~  262 (377)
T 3cbl_A          185 QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNV-LKISDFGMSRE  262 (377)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC-EEECCGGGCEE
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCc-EEECcCCCcee
Confidence                    444433                         7899999999999999999999999998 99999999986

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.72  E-value=2.5e-17  Score=119.14  Aligned_cols=89  Identities=27%  Similarity=0.399  Sum_probs=69.7

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc---------------------cccCchhHHHHHHH---------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------------------ITNDTNSILRFLLL---------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------------------~~~~~~~~~~~~~~---------------   66 (127)
                      ...+..++|++.+.||+|+||.||+|++..                     .......+..++..               
T Consensus         7 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   86 (325)
T 3kex_A            7 ARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG   86 (325)
T ss_dssp             CCBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB
T ss_pred             HhhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence            445678899999999999999999999854                     00111234444432               


Q ss_pred             --------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                              |+.+|+                         .|+.|||+++|+||||||.||+++.++. +||+|||+++.
T Consensus        87 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~-~kl~Dfg~a~~  164 (325)
T 3kex_A           87 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQ-VQVADFGVADL  164 (325)
T ss_dssp             SSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSC-EEECSCSGGGG
T ss_pred             CccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCe-EEECCCCcccc
Confidence                    333333                         7899999999999999999999999998 99999999986

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.72  E-value=2.9e-17  Score=119.03  Aligned_cols=85  Identities=28%  Similarity=0.557  Sum_probs=67.7

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------c--------ccCchhHHHHHHH-----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------I--------TNDTNSILRFLLL-----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~--------~~~~~~~~~~~~~-----------------------   66 (127)
                      ..++|++.+.||+|+||.||+|+++.         +        ......|..++..                       
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   84 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            46899999999999999999999874         0        0111244444443                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+++                        .|+.|||+++|+|+||||.||+++.++. +||+|||+++.
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~-~kl~Dfg~a~~  154 (323)
T 3tki_A           85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN-LKISDFGLATV  154 (323)
T ss_dssp             ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCC-EEEEEeeccce
Confidence             444433                        7899999999999999999999999998 99999999975

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.71  E-value=1.7e-17  Score=128.41  Aligned_cols=87  Identities=30%  Similarity=0.599  Sum_probs=68.5

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc---------cc-----c-----CchhHHHHHHH-------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT-----N-----DTNSILRFLLL-------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~-----~-----~~~~~~~~~~~-------------------   66 (127)
                      .+..++|++.++||+|+||.||+|+++.         +.     .     ....|..++..                   
T Consensus       181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l  260 (543)
T 3c4z_A          181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL  260 (543)
T ss_dssp             CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             cCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEE
Confidence            3567899999999999999999999875         00     0     01133444433                   


Q ss_pred             -----hhcchh----------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD----------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~----------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.+|+                            .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~-vkL~DFGla~~  338 (543)
T 3c4z_A          261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN-VRISDLGLAVE  338 (543)
T ss_dssp             EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCC-EEEeecceeee
Confidence                 344333                            7899999999999999999999999999 99999999987

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.71  E-value=1.7e-17  Score=129.17  Aligned_cols=87  Identities=37%  Similarity=0.577  Sum_probs=69.0

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc---------c-----ccC-----chhHHHHHHH-------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS---------I-----TND-----TNSILRFLLL-------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~-----~~~-----~~~~~~~~~~-------------------   66 (127)
                      .+..++|++.++||+|+||.||+|+++.         +     ...     ...|..++..                   
T Consensus       180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l  259 (576)
T 2acx_A          180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL  259 (576)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             CccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEE
Confidence            3567889999999999999999999875         0     000     1134444433                   


Q ss_pred             -----hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.+|+                          .||.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~-vKL~DFGla~~  335 (576)
T 2acx_A          260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGH-IRISDLGLAVH  335 (576)
T ss_dssp             EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCC-eEEEeccccee
Confidence                 444443                          7899999999999999999999999999 99999999987

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.71  E-value=1.1e-17  Score=122.72  Aligned_cols=39  Identities=26%  Similarity=0.444  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec-----------CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA-----------GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~-----------~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.           .+. +||+|||+|+.
T Consensus       183 ~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~-~kl~DFG~a~~  232 (365)
T 3e7e_A          183 YMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAG-LALIDLGQSID  232 (365)
T ss_dssp             HHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTT-EEECCCTTCEE
T ss_pred             HHHHHHhhCCeecCCCCHHHEEecccccCccccccccCC-EEEeeCchhhh
Confidence            7899999999999999999999988           778 99999999975

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.71  E-value=1.5e-19  Score=131.31  Aligned_cols=48  Identities=19%  Similarity=0.216  Sum_probs=41.3

Q ss_pred             HHHHHHH-HCCcEecCCCCCCEEEecCC--------------------CeEEEEecccceecCcccceee
Q psy7471          73 ACLTFLH-RHGVVYRDLKLDNILLDAGG--------------------SLLKLADFGRCARKKIKLFCDL  121 (127)
Q Consensus        73 ~al~~lH-~~~iih~dlk~~nil~~~~~--------------------~~~kl~dfg~a~~~~~~~~~gt  121 (127)
                      .||.||| +++|+||||||+|||++.++                    . +||+|||+|+.......+||
T Consensus       172 ~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~-vkL~DFG~a~~~~~~~~~gt  240 (336)
T 2vuw_A          172 ASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQ-VSIIDYTLSRLERDGIVVFC  240 (336)
T ss_dssp             HHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEE-EEECCCTTCBEEETTEEECC
T ss_pred             HHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCce-EEEeeccccEecCCCcEEEe
Confidence            7999999 89999999999999999876                    5 99999999997544444555

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.71  E-value=3.1e-17  Score=121.04  Aligned_cols=39  Identities=28%  Similarity=0.514  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       214 ~aL~~LH~~~ivHrDlkp~NIll~~~~~-~kl~DFG~a~~  252 (370)
T 2psq_A          214 RGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARD  252 (370)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEECTTCC-EEECCCSSCEE
T ss_pred             HHHHHHHhCCeeccccchhhEEECCCCC-EEEccccCCcc
Confidence            6899999999999999999999999998 99999999986

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.71  E-value=3e-17  Score=124.02  Aligned_cols=93  Identities=23%  Similarity=0.369  Sum_probs=73.0

Q ss_pred             CCCCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC------chhHHHHHHH------------------
Q psy7471          19 SSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND------TNSILRFLLL------------------   66 (127)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~------~~~~~~~~~~------------------   66 (127)
                      .....|++..++|++.+.||+|+||.||+|+++.        +...      ...|..++..                  
T Consensus       174 ~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  253 (452)
T 1fmk_A          174 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI  253 (452)
T ss_dssp             SSTTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSC
T ss_pred             CCccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCce
Confidence            3456788899999999999999999999999876        1110      1133444433                  


Q ss_pred             -----hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.+|+                          .||.|||+++++||||||+||+++.++. +||+|||+++.
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~-~kl~DfG~a~~  329 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-CKVADFGLARL  329 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC-EEECCCCTTC-
T ss_pred             EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCC-EEECCCcccee
Confidence                 344433                          7899999999999999999999999888 99999999986

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.71  E-value=5.8e-17  Score=122.43  Aligned_cols=91  Identities=24%  Similarity=0.421  Sum_probs=71.5

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------cccCc------hhHHHHHHH--------------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITNDT------NSILRFLLL--------------------   66 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~~------~~~~~~~~~--------------------   66 (127)
                      ...|++..++|++.+.||+|+||.||+|+++.        +....      ..|..++..                    
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~l  259 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYI  259 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEE
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEE
Confidence            45678889999999999999999999999864        11110      122322222                    


Q ss_pred             ---hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                         |+.+|+                          .||.|||+++++||||||+|||++.++. +||+|||+++.
T Consensus       260 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~-~kl~DFG~a~~  333 (454)
T 1qcf_A          260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV-CKIADFGLARV  333 (454)
T ss_dssp             EECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCC-EEECSTTGGGG
T ss_pred             EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCc-EEEeeCCCceE
Confidence               444433                          7899999999999999999999999998 99999999986

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.70  E-value=2.4e-17  Score=116.63  Aligned_cols=95  Identities=26%  Similarity=0.498  Sum_probs=68.8

Q ss_pred             CCCCCCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC------chhHHHHHHH----------------
Q psy7471          17 RGSSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND------TNSILRFLLL----------------   66 (127)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~------~~~~~~~~~~----------------   66 (127)
                      .......|.+..++|++.+.||+|+||.||+|.+..        +...      ...|..++..                
T Consensus        12 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   91 (283)
T 3gen_A           12 AGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ   91 (283)
T ss_dssp             ----CCTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             cCCCCCCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecC
Confidence            334456788899999999999999999999998876        1111      0133333332                


Q ss_pred             --------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                              |+.+++                         .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~-~kl~Dfg~~~~  169 (283)
T 3gen_A           92 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-VKVSDFGLSRY  169 (283)
T ss_dssp             SSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSC-EEECSTTGGGG
T ss_pred             CCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCC-EEEcccccccc
Confidence                    333332                         7899999999999999999999999998 99999999875

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.70  E-value=7.8e-17  Score=115.55  Aligned_cols=88  Identities=26%  Similarity=0.433  Sum_probs=68.2

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc---------ccc-Cch------hHHHHHHH---------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN-DTN------SILRFLLL---------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~-~~~------~~~~~~~~---------------------   66 (127)
                      +.+..++|++.++||+|+||.||+|+++.         +.. ...      .|..++..                     
T Consensus         5 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   84 (310)
T 3s95_A            5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF   84 (310)
T ss_dssp             EEECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             eeeChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEE
Confidence            34667899999999999999999999875         111 111      22222221                     


Q ss_pred             ---hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                         |+.+++                         .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~-~kl~Dfg~~~~  157 (310)
T 3s95_A           85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKN-VVVADFGLARL  157 (310)
T ss_dssp             EEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSC-EEECCCTTCEE
T ss_pred             EEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCC-EEEeeccccee
Confidence               343433                         7899999999999999999999999999 99999999986

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=3.9e-17  Score=119.78  Aligned_cols=87  Identities=41%  Similarity=0.746  Sum_probs=67.5

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc------------c-----------ccCchhHHHHHHH---------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS------------I-----------TNDTNSILRFLLL---------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~-----------~~~~~~~~~~~~~---------------   66 (127)
                      .+..++|++.+.||+|+||.||+|++..            +           ......|..++..               
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  129 (355)
T 1vzo_A           50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ  129 (355)
T ss_dssp             CCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred             cccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe
Confidence            4455899999999999999999998831            0           0011134444433               


Q ss_pred             ----------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                                |+.+++                        .||.|||+++|+||||||.||+++.++. +||+|||+++.
T Consensus       130 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~kl~DfG~a~~  208 (355)
T 1vzo_A          130 TETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH-VVLTDFGLSKE  208 (355)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC-EEESCSSEEEE
T ss_pred             eCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCc-EEEeeCCCCee
Confidence                      343333                        7899999999999999999999999998 99999999986

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.70  E-value=1.7e-17  Score=120.16  Aligned_cols=89  Identities=27%  Similarity=0.394  Sum_probs=67.5

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc-------------ccc--C------chhHHHHHHH---------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------------ITN--D------TNSILRFLLL---------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------~~~--~------~~~~~~~~~~---------------   66 (127)
                      ...+..++|++.+.||+|+||.||+|++..             ...  .      ...|..++..               
T Consensus         9 ~~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   88 (327)
T 3poz_A            9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT   88 (327)
T ss_dssp             SEECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES
T ss_pred             HhhcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence            344667889999999999999999998753             000  0      0123333333               


Q ss_pred             --------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                              |+.+|+                         .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus        89 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~-~kl~Dfg~a~~  166 (327)
T 3poz_A           89 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKL  166 (327)
T ss_dssp             SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE-EEECCTTHHHH
T ss_pred             CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCC-EEEccCcceeE
Confidence                    222222                         7899999999999999999999999998 99999999875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.69  E-value=4.2e-17  Score=125.64  Aligned_cols=93  Identities=23%  Similarity=0.369  Sum_probs=73.5

Q ss_pred             CCCCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC------chhHHHHHHH------------------
Q psy7471          19 SSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND------TNSILRFLLL------------------   66 (127)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~------~~~~~~~~~~------------------   66 (127)
                      .....|++..++|++.+.||+|+||.||+|+++.        +...      ...|..++..                  
T Consensus       257 ~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  336 (535)
T 2h8h_A          257 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI  336 (535)
T ss_dssp             SSTTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSC
T ss_pred             cCccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccc
Confidence            3456788999999999999999999999999876        1111      1134444433                  


Q ss_pred             -----hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.+|+                          .||.|||+++|+||||||+|||++.++. +||+|||+++.
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~-~kl~DFG~a~~  412 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-CKVADFGLARL  412 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC-EEECCTTSTTT
T ss_pred             eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCc-EEEccccccee
Confidence                 333332                          7899999999999999999999999888 99999999875

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.69  E-value=3.8e-17  Score=124.05  Aligned_cols=39  Identities=36%  Similarity=0.623  Sum_probs=36.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       175 ~aL~~lH~~~iiHrDlkp~NIll~~~~~-~kl~DFG~a~~  213 (464)
T 3ttj_A          175 CGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFGLART  213 (464)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECTTSC-EEECCCCCC--
T ss_pred             HHHHHHHHCCcccCCCChHhEEEeCCCC-EEEEEEEeeee
Confidence            7899999999999999999999999999 99999999986

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.69  E-value=3.1e-17  Score=120.00  Aligned_cols=85  Identities=32%  Similarity=0.537  Sum_probs=66.2

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc------cc-------------cCchhHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS------IT-------------NDTNSILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~-------------~~~~~~~~~~~~--------------------   66 (127)
                      ...++|++.+.||+|+||.||+|++..      +.             .....|+.++..                    
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   85 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIV   85 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            456899999999999999999999855      00             001133333332                    


Q ss_pred             ----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                          |+ +|+                        .|+.|||+++++||||||+||+++.++. +||+|||+++.
T Consensus        86 lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~-~kl~DFG~s~~  157 (336)
T 3h4j_B           86 MVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLN-VKIADFGLSNI  157 (336)
T ss_dssp             EEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCC-EEECCSSCTBT
T ss_pred             EEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCC-EEEEEecccee
Confidence                33 122                        7899999999999999999999999998 99999999876

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.69  E-value=4.6e-17  Score=122.90  Aligned_cols=90  Identities=26%  Similarity=0.543  Sum_probs=71.1

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc-------cccC-----chhHHHHHHH-----------------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------ITND-----TNSILRFLLL-----------------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~-----~~~~~~~~~~-----------------------   66 (127)
                      ..|++..++|++.+.||+|+||.||+|.+.+       +...     ...|..++..                       
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv  265 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV  265 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence            4577889999999999999999999999876       1100     1123333332                       


Q ss_pred             --hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                        |+.+|+                          .|+.|||+++++||||||+||+++.++. +||+|||+++.
T Consensus       266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~-~kl~DfG~a~~  338 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV-AKVSDFGLTKE  338 (450)
T ss_dssp             EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCC-EEEeeCCCccc
Confidence              343333                          7899999999999999999999999998 99999999986

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.69  E-value=3.6e-17  Score=123.36  Aligned_cols=39  Identities=33%  Similarity=0.591  Sum_probs=37.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.++. +||+|||+++.
T Consensus       167 ~aL~~LH~~~iiHrDlKp~NILl~~~~~-~kl~DFGla~~  205 (458)
T 3rp9_A          167 VGVKYVHSAGILHRDLKPANCLVNQDCS-VKVCDFGLART  205 (458)
T ss_dssp             HHHHHHHHTTCBCCCCCGGGEEECTTCC-EEECCCTTCBC
T ss_pred             HHHHHHHhCCcCCCCCChhhEEECCCCC-Eeecccccchh
Confidence            7899999999999999999999999999 99999999986

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.69  E-value=4.6e-17  Score=124.31  Aligned_cols=91  Identities=20%  Similarity=0.356  Sum_probs=71.9

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc---------cccC------chhHHHHHHH-------------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITND------TNSILRFLLL-------------------   66 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~------~~~~~~~~~~-------------------   66 (127)
                      ...|++..++|++.+.||+|+||.||+|+++.         +...      ...|..++..                   
T Consensus       212 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~  291 (495)
T 1opk_A          212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF  291 (495)
T ss_dssp             SSCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             ccccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcE
Confidence            34678888999999999999999999999975         1111      1133334433                   


Q ss_pred             -----hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.+|+                          .||.|||+++|+||||||+|||++.++. +||+|||+++.
T Consensus       292 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~-~kl~DFG~a~~  367 (495)
T 1opk_A          292 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL-VKVADFGLSRL  367 (495)
T ss_dssp             EEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGC-EEECCTTCEEC
T ss_pred             EEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCc-EEEeeccccee
Confidence                 333333                          7899999999999999999999999998 99999999986

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.69  E-value=2.8e-17  Score=117.76  Aligned_cols=85  Identities=32%  Similarity=0.509  Sum_probs=65.9

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------c--cc-C----chhHHHHHHH------------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------I--TN-D----TNSILRFLLL------------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~--~~-~----~~~~~~~~~~------------------------   66 (127)
                      ...+|++.+.||+|+||.||+|++..         +  .. .    ...|..++..                        
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            45679999999999999999998754         0  00 0    0123333332                        


Q ss_pred             hhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+|+                       .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus        98 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~-~kl~Dfg~~~~  165 (297)
T 3fxz_A           98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ  165 (297)
T ss_dssp             CCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             CCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCC-EEEeeCCCcee
Confidence            444443                       7899999999999999999999999998 99999999876

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.69  E-value=4e-17  Score=124.51  Aligned_cols=88  Identities=36%  Similarity=0.538  Sum_probs=68.9

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------ccc-----------CchhHHHHHHH------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITN-----------DTNSILRFLLL------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~-----------~~~~~~~~~~~------------------   66 (127)
                      ..+..++|++.+.||+|+||.||+|+++.        +..           ....|+.++..                  
T Consensus        11 ~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~   90 (476)
T 2y94_A           11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSD   90 (476)
T ss_dssp             SCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             CCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            44678999999999999999999999874        000           01123333322                  


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            |+.+|+                        .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus        91 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~-vkL~DFG~a~~  165 (476)
T 2y94_A           91 IFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMN-AKIADFGLSNM  165 (476)
T ss_dssp             EEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCC-EEECCCSSCEE
T ss_pred             EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCC-eEEEeccchhh
Confidence                  444433                        7899999999999999999999999999 99999999987

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.69  E-value=6.4e-17  Score=116.53  Aligned_cols=89  Identities=26%  Similarity=0.393  Sum_probs=68.0

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc--------ccc---C------chhHHHHHHH-------------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITN---D------TNSILRFLLL-------------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~---~------~~~~~~~~~~-------------------   66 (127)
                      ..+...++|++.+.||+|+||.||+|++..        +..   .      ...|..++..                   
T Consensus        15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   94 (311)
T 3niz_A           15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL   94 (311)
T ss_dssp             CEECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCE
T ss_pred             eecchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEE
Confidence            344567899999999999999999999854        100   0      1133444433                   


Q ss_pred             -----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.++.                        .|+.|||+++|+|+||||+||+++.++. +||+|||+++.
T Consensus        95 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~-~kl~Dfg~a~~  168 (311)
T 3niz_A           95 TLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA-LKLADFGLARA  168 (311)
T ss_dssp             EEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCC-EEEccCcCcee
Confidence                 222211                        7899999999999999999999999998 99999999986

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.69  E-value=5e-17  Score=119.90  Aligned_cols=85  Identities=26%  Similarity=0.364  Sum_probs=66.4

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------ccc-------------CchhHHHHHHH------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITN-------------DTNSILRFLLL------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~-------------~~~~~~~~~~~------------------   66 (127)
                      ..+.|++.+.||+|+||.||+|+++.         +..             ....|+.++..                  
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            45679999999999999999999875         100             01234444433                  


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCC----CeEEEEeccccee
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGG----SLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~----~~~kl~dfg~a~~  112 (127)
                            |+.+|+                        .|+.|||+++|+|+||||+||+++..+    . +||+|||+++.
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~-vkl~DFG~a~~  168 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHE  168 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCC-EEECCCSSCEE
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccC-EEEEecCCceE
Confidence                  444443                        789999999999999999999998776    6 99999999987

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.69  E-value=9.3e-17  Score=114.56  Aligned_cols=39  Identities=33%  Similarity=0.667  Sum_probs=37.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus       148 ~~l~~lH~~~ivH~Dlkp~Nil~~~~~~-~kl~Dfg~~~~  186 (298)
T 2zv2_A          148 KGIEYLHYQKIIHRDIKPSNLLVGEDGH-IKIADFGVSNE  186 (298)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEECTTSC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCeeccCCCHHHEEECCCCC-EEEecCCCccc
Confidence            7899999999999999999999999998 99999999986

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.68  E-value=4.9e-17  Score=119.31  Aligned_cols=39  Identities=33%  Similarity=0.576  Sum_probs=36.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEe--cCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~--~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++  .++. +||+|||+++.
T Consensus       163 ~~l~~lH~~~iiHrDlkp~Nill~~~~~~~-~kl~DFG~a~~  203 (364)
T 3op5_A          163 DILEYIHEHEYVHGDIKASNLLLNYKNPDQ-VYLVDYGLAYR  203 (364)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEEESSCTTC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCeEEecCCHHHEEEecCCCCe-EEEEECCccee
Confidence            789999999999999999999999  7777 99999999976

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.68  E-value=3.5e-17  Score=115.89  Aligned_cols=91  Identities=26%  Similarity=0.421  Sum_probs=63.0

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc-----------c-cc--Cch------hHHHHHHH--------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS-----------I-TN--DTN------SILRFLLL--------------   66 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-----------~-~~--~~~------~~~~~~~~--------------   66 (127)
                      ...+++..++|++.+.||+|+||.||+|++..           . ..  ...      .|..++..              
T Consensus         7 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   86 (281)
T 1mp8_A            7 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT   86 (281)
T ss_dssp             --CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             ccceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc
Confidence            34567888999999999999999999998853           0 00  001      22222221              


Q ss_pred             ---------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                               |+.+++                         .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~  165 (281)
T 1mp8_A           87 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRY  165 (281)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE-EEECC------
T ss_pred             cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCC-EEECccccccc
Confidence                     333322                         7899999999999999999999999888 99999999876

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.68  E-value=1.2e-16  Score=116.59  Aligned_cols=86  Identities=28%  Similarity=0.432  Sum_probs=64.9

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc--------cccC-------chhHHHHHHH-----------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND-------TNSILRFLLL-----------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~-------~~~~~~~~~~-----------------------   66 (127)
                      .+..++|++.+.||+|+||.||+|++..        ....       ...+..++..                       
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~  110 (360)
T 3llt_A           31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH  110 (360)
T ss_dssp             CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred             eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence            3455889999999999999999999865        1110       1123333332                       


Q ss_pred             ------hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEec-----------------
Q psy7471          67 ------LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDA-----------------   97 (127)
Q Consensus        67 ------~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~-----------------   97 (127)
                            |+ +++                          .||.|||+++|+||||||+||+++.                 
T Consensus       111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~  189 (360)
T 3llt_A          111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGK  189 (360)
T ss_dssp             EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCC
T ss_pred             eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccc
Confidence                  11 111                          7899999999999999999999975                 


Q ss_pred             --------CCCeEEEEeccccee
Q psy7471          98 --------GGSLLKLADFGRCAR  112 (127)
Q Consensus        98 --------~~~~~kl~dfg~a~~  112 (127)
                              ... +||+|||+++.
T Consensus       190 ~~~~~~~~~~~-~kl~DFG~a~~  211 (360)
T 3llt_A          190 KIQIYRTKSTG-IKLIDFGCATF  211 (360)
T ss_dssp             EEEEEEESCCC-EEECCCTTCEE
T ss_pred             cccccccCCCC-EEEEeccCcee
Confidence                    566 99999999986

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.68  E-value=1.3e-16  Score=114.91  Aligned_cols=39  Identities=41%  Similarity=0.600  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+|+||||+||+++.++. +||+|||+++.
T Consensus       168 ~aL~~LH~~~ivH~Dikp~NIll~~~~~-~kl~DFG~a~~  206 (311)
T 3p1a_A          168 LALAHLHSQGLVHLDVKPANIFLGPRGR-CKLGDFGLLVE  206 (311)
T ss_dssp             HHHHHHHHTTEECCCCSGGGEEECGGGC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCEecCCCCHHHEEECCCCC-EEEccceeeee
Confidence            7899999999999999999999999998 99999999876

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.68  E-value=6.5e-17  Score=120.55  Aligned_cols=39  Identities=33%  Similarity=0.602  Sum_probs=36.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++.   ++. +||+|||+++.
T Consensus       172 ~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~-~kl~DFG~a~~  213 (400)
T 1nxk_A          172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAI-LKLTDFGFAKE  213 (400)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEESSSSTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCccccCcCcceEEEecCCCCcc-EEEEecccccc
Confidence            7899999999999999999999997   667 99999999987

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.68  E-value=4.2e-17  Score=118.31  Aligned_cols=89  Identities=27%  Similarity=0.411  Sum_probs=65.0

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc-------------ccc--Cch------hHHHHHHH---------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------------ITN--DTN------SILRFLLL---------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------~~~--~~~------~~~~~~~~---------------   66 (127)
                      ...+..++|++.+.||+|+||.||+|++..             ...  ...      .|..++..               
T Consensus         9 ~~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   88 (327)
T 3lzb_A            9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT   88 (327)
T ss_dssp             CEECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES
T ss_pred             hcccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec
Confidence            344667899999999999999999999854             000  001      22222222               


Q ss_pred             --------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                              |+.+|+                         .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus        89 ~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~-~kL~DfG~a~~  166 (327)
T 3lzb_A           89 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKL  166 (327)
T ss_dssp             SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE-EEECCTTC---
T ss_pred             CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCC-EEEccCcceeE
Confidence                    222222                         7899999999999999999999999998 99999999975

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.68  E-value=4.4e-17  Score=114.61  Aligned_cols=90  Identities=22%  Similarity=0.406  Sum_probs=69.3

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC------chhHHHHHHH---------------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND------TNSILRFLLL---------------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~------~~~~~~~~~~---------------------   66 (127)
                      ..|.+..++|++.+.||+|+||.||+|++..        +...      ...|..++..                     
T Consensus         3 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (269)
T 4hcu_A            3 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL   82 (269)
T ss_dssp             --CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             ccEEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEE
Confidence            3567888999999999999999999999855        1111      1133333333                     


Q ss_pred             ---hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                         |+.+++                         .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~-~kl~Dfg~~~~  155 (269)
T 4hcu_A           83 VFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-IKVSDFGMTRF  155 (269)
T ss_dssp             EEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGC-EEECCTTGGGG
T ss_pred             EEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCC-EEecccccccc
Confidence               333332                         7899999999999999999999999988 99999999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.68  E-value=1.3e-16  Score=112.12  Aligned_cols=88  Identities=26%  Similarity=0.448  Sum_probs=69.4

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC------chhHHHHHHH-----------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND------TNSILRFLLL-----------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~------~~~~~~~~~~-----------------------   66 (127)
                      +++..++|++.+.||+|+||.||+|+++.        +...      ...|..++..                       
T Consensus         3 ~~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (268)
T 3sxs_A            3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT   82 (268)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             eEechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence            56778999999999999999999998876        1111      1133333333                       


Q ss_pred             -hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+++                         .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~-~~l~Dfg~~~~  153 (268)
T 3sxs_A           83 EYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLC-VKVSDFGMTRY  153 (268)
T ss_dssp             ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCC-EEECCTTCEEE
T ss_pred             EccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCC-EEEccCcccee
Confidence             333332                         7899999999999999999999999998 99999999986

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.68  E-value=6e-17  Score=116.76  Aligned_cols=91  Identities=25%  Similarity=0.444  Sum_probs=66.1

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc-------ccc---Cc------hhHHHHHHH------------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------ITN---DT------NSILRFLLL------------------   66 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~---~~------~~~~~~~~~------------------   66 (127)
                      ...+.+..++|++.+.||+|+||.||+|++.+       +..   ..      ..|..++..                  
T Consensus        29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 3p86_A           29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN  108 (309)
T ss_dssp             ---CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred             cccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence            34556778899999999999999999998866       100   11      123334333                  


Q ss_pred             ------hhcchh---------------------------HHHHHHHHCC--cEecCCCCCCEEEecCCCeEEEEecccce
Q psy7471          67 ------LLCAGD---------------------------ACLTFLHRHG--VVYRDLKLDNILLDAGGSLLKLADFGRCA  111 (127)
Q Consensus        67 ------~~~~g~---------------------------~al~~lH~~~--iih~dlk~~nil~~~~~~~~kl~dfg~a~  111 (127)
                            |+.+|+                           .|+.|||+++  ++|+||||+||+++.++. +||+|||+++
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~-~kL~Dfg~a~  187 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYT-VKVCDFGLSR  187 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCC-EEECCCC---
T ss_pred             eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCc-EEECCCCCCc
Confidence                  333333                           7899999999  999999999999999998 9999999987


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      .
T Consensus       188 ~  188 (309)
T 3p86_A          188 L  188 (309)
T ss_dssp             -
T ss_pred             c
Confidence            5

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.68  E-value=9.6e-18  Score=118.52  Aligned_cols=92  Identities=22%  Similarity=0.488  Sum_probs=66.3

Q ss_pred             CCCCCcccCCCeEEEEEeceeCCceEEEEEEcc------cccCc------hhHHHHHHH---------------------
Q psy7471          20 SGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS------ITNDT------NSILRFLLL---------------------   66 (127)
Q Consensus        20 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~~~~------~~~~~~~~~---------------------   66 (127)
                      ....+.+..++|++.+.||+|+||.||+|++.+      .....      ..|..++..                     
T Consensus        12 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (278)
T 1byg_A           12 YRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY   91 (278)
T ss_dssp             ---CCBCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCE
T ss_pred             hhccccCChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceE
Confidence            345677889999999999999999999998876      00000      012222211                     


Q ss_pred             ----hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                          |+.+++                          .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~~l~Dfg~~~~  166 (278)
T 1byg_A           92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV-AKVSDFGLTKE  166 (278)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSC-EEECCCCC---
T ss_pred             EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCc-EEEeecccccc
Confidence                232322                          6899999999999999999999999998 99999999876

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.68  E-value=6.6e-17  Score=122.24  Aligned_cols=85  Identities=33%  Similarity=0.482  Sum_probs=63.5

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cccC---------chhHHHHHHH----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITND---------TNSILRFLLL----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~---------~~~~~~~~~~----------------------   66 (127)
                      ..++|++.+.||+|+||.||+|.++.         +...         ...|..++..                      
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            34679999999999999999998865         1100         1134444433                      


Q ss_pred             --hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          67 --LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                        |+.+|+                        .|+.|||+++|+||||||+||+++.   ++. +||+|||+++.
T Consensus        89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~-vkL~DFG~a~~  162 (444)
T 3soa_A           89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAA-VKLADFGLAIE  162 (444)
T ss_dssp             ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCC-EEECCCSSCBC
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCc-EEEccCceeEE
Confidence              454543                        7899999999999999999999984   456 99999999976

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.68  E-value=3.5e-17  Score=116.42  Aligned_cols=93  Identities=24%  Similarity=0.424  Sum_probs=65.9

Q ss_pred             CCCCCCcccCCCeEEEEEeceeCCceEEEEEEcc------cc--cCc-------hhHHHHHHH-----------------
Q psy7471          19 SSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS------IT--NDT-------NSILRFLLL-----------------   66 (127)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~--~~~-------~~~~~~~~~-----------------   66 (127)
                      .....+++.-++|++.+.||+|+||.||+|++..      ..  ...       ..|..++..                 
T Consensus        14 ~~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   93 (289)
T 3og7_A           14 DAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ   93 (289)
T ss_dssp             ----CCBCCTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             CCCCCCccCccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCc
Confidence            3445668889999999999999999999998765      10  001       122222222                 


Q ss_pred             ------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            |+.+++                         .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~-~kl~Dfg~~~~  169 (289)
T 3og7_A           94 LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT-VKIGDFGLATE  169 (289)
T ss_dssp             CEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE-EEECCCC----
T ss_pred             cEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCC-EEEccceeccc
Confidence                  333322                         7899999999999999999999999988 99999999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.67  E-value=5.5e-17  Score=115.50  Aligned_cols=88  Identities=26%  Similarity=0.454  Sum_probs=66.4

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc-------------cccCc-------hhHHHHHHH-----------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS-------------ITNDT-------NSILRFLLL-----------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------~~~~~-------~~~~~~~~~-----------------   66 (127)
                      ..+..++|++.+.||+|+||.||+|++..             +....       ..|..++..                 
T Consensus         5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   84 (295)
T 3ugc_A            5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG   84 (295)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH
T ss_pred             CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            45678899999999999999999998532             11111       122223222                 


Q ss_pred             ---------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                               |+.+++                         .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~-~kl~Dfg~~~~  163 (295)
T 3ugc_A           85 RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKV  163 (295)
T ss_dssp             HTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE-EEECCCCSCC-
T ss_pred             CCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCe-EEEccCccccc
Confidence                     343433                         7899999999999999999999999998 99999999876

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.67  E-value=1.2e-16  Score=117.52  Aligned_cols=89  Identities=27%  Similarity=0.431  Sum_probs=65.7

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc---------ccc----C--chhHHHHHHH----------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN----D--TNSILRFLLL----------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----~--~~~~~~~~~~----------------------   66 (127)
                      .....++|++.+.||+|+||.||+|+++.         +..    .  ...++.++..                      
T Consensus        15 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   94 (361)
T 3uc3_A           15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAII   94 (361)
T ss_dssp             CCCCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCCCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence            34557899999999999999999999975         100    1  1133333333                      


Q ss_pred             --hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC-eEEEEeccccee
Q psy7471          67 --LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS-LLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~-~~kl~dfg~a~~  112 (127)
                        |+.+|+                        .|+.|||+++|+||||||.||+++.+.. ++||+|||+++.
T Consensus        95 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~  167 (361)
T 3uc3_A           95 MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS  167 (361)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred             EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence              444443                        7899999999999999999999986542 399999999874

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.67  E-value=2.4e-16  Score=112.10  Aligned_cols=39  Identities=44%  Similarity=0.681  Sum_probs=37.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+|+||||+||+++.++. +||+|||+++.
T Consensus       112 ~~l~~lH~~~ivH~dikp~Nil~~~~~~-~kl~Dfg~~~~  150 (292)
T 3o0g_A          112 KGLGFCHSRNVLHRDLKPQNLLINRNGE-LKLANFGLARA  150 (292)
T ss_dssp             HHHHHHHHTTEECCCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEeeccccee
Confidence            7899999999999999999999999999 99999999986

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.67  E-value=1.1e-16  Score=117.04  Aligned_cols=86  Identities=27%  Similarity=0.417  Sum_probs=66.0

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc------------cccCchhHHHHHHH-------------------------hhc
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS------------ITNDTNSILRFLLL-------------------------LLC   69 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~~~~~~~~~~~~~-------------------------~~~   69 (127)
                      ..++|++.+.||+|+||.||+|+++.            .......|..++..                         |+.
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   99 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK   99 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence            35779999999999999999999875            11122345555443                         444


Q ss_pred             chh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC---eEEEEeccccee
Q psy7471          70 AGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS---LLKLADFGRCAR  112 (127)
Q Consensus        70 ~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~---~~kl~dfg~a~~  112 (127)
                      +|+                        .|+.|||+++|+||||||+||++.....   .+||+|||+++.
T Consensus       100 gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A          100 GGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             SCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            443                        7899999999999999999999854321   299999999986

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=2.7e-16  Score=113.95  Aligned_cols=85  Identities=24%  Similarity=0.433  Sum_probs=66.1

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cccCc------hhHHHHHHH------------------------hh
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITNDT------NSILRFLLL------------------------LL   68 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~~------~~~~~~~~~------------------------~~   68 (127)
                      .++|++.+.||+|+||.||+|+++.         +....      ..|..++..                        |+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            5789999999999999999999875         11111      133334333                        44


Q ss_pred             cchh-------------------------HHHHHHHHCCcEecCCCCCCEEEec--CCCeEEEEecccceec
Q psy7471          69 CAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDA--GGSLLKLADFGRCARK  113 (127)
Q Consensus        69 ~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~--~~~~~kl~dfg~a~~~  113 (127)
                      .+++                         .|+.|||+++++||||||+||+++.  ++. +||+|||+++..
T Consensus        84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~-~kl~Dfg~a~~~  154 (321)
T 1tki_A           84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSST-IKIIEFGQARQL  154 (321)
T ss_dssp             CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCC-EEECCCTTCEEC
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCC-EEEEECCCCeEC
Confidence            4433                         7899999999999999999999987  567 999999999873

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.67  E-value=1.8e-16  Score=117.80  Aligned_cols=85  Identities=31%  Similarity=0.478  Sum_probs=64.9

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc--------c---ccCchhHHHHHHH-----------------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS--------I---TNDTNSILRFLLL-----------------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~--------~---~~~~~~~~~~~~~-----------------------------   66 (127)
                      ...+|++.++||+|+||+||+|++..        +   ......|..++..                             
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~  117 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL  117 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence            34679999999999999999999865        1   0111234444433                             


Q ss_pred             -hhcchh---------------------------HHHHHHHHCCcEecCCCCCCEEEe-cCCCeEEEEeccccee
Q psy7471          67 -LLCAGD---------------------------ACLTFLHRHGVVYRDLKLDNILLD-AGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~---------------------------~al~~lH~~~iih~dlk~~nil~~-~~~~~~kl~dfg~a~~  112 (127)
                       |+.++.                           .||.|||+++|+||||||+||+++ .++. +||+|||+++.
T Consensus       118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~-~kL~DFG~a~~  191 (394)
T 4e7w_A          118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGV-LKLIDFGSAKI  191 (394)
T ss_dssp             ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTE-EEECCCTTCEE
T ss_pred             eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCc-EEEeeCCCccc
Confidence             222211                           789999999999999999999999 5676 99999999986

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.67  E-value=2e-16  Score=111.61  Aligned_cols=91  Identities=25%  Similarity=0.432  Sum_probs=71.3

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC------chhHHHHHHH--------------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND------TNSILRFLLL--------------------   66 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~------~~~~~~~~~~--------------------   66 (127)
                      ...|++..++|++.+.||+|+||.||+|++..        +...      ...|..++..                    
T Consensus         5 ~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (279)
T 1qpc_A            5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYI   84 (279)
T ss_dssp             TCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             hhhcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEE
Confidence            35678888999999999999999999998765        1110      1133334333                    


Q ss_pred             ---hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                         |+.+++                          .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~-~kl~Dfg~~~~  158 (279)
T 1qpc_A           85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS-CKIADFGLARL  158 (279)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCC-EEECCCccccc
Confidence               333322                          7899999999999999999999999988 99999999986

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.66  E-value=2.2e-16  Score=118.31  Aligned_cols=40  Identities=40%  Similarity=0.767  Sum_probs=36.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.+...+||+|||+++.
T Consensus       167 ~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~  206 (420)
T 1j1b_A          167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  206 (420)
T ss_dssp             HHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             HHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence            6899999999999999999999997654389999999986

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.66  E-value=2.8e-16  Score=112.28  Aligned_cols=86  Identities=22%  Similarity=0.323  Sum_probs=65.9

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------c----ccCch------hHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------I----TNDTN------SILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~----~~~~~------~~~~~~~~--------------------   66 (127)
                      +..++|++.+.||+|+||.||+|++..         +    ....+      .|..++..                    
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~   87 (294)
T 4eqm_A            8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY   87 (294)
T ss_dssp             CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEE
T ss_pred             HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEE
Confidence            456789999999999999999998865         1    00111      12222211                    


Q ss_pred             ----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                          |+.+++                        .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus        88 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~-~kl~Dfg~~~~  160 (294)
T 4eqm_A           88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKT-LKIFDFGIAKA  160 (294)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC-EEECCCSSSTT
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-EEEEeCCCccc
Confidence                444433                        7899999999999999999999999998 99999999875

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.66  E-value=2.2e-16  Score=116.73  Aligned_cols=39  Identities=28%  Similarity=0.507  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+|+||||+||+++.++. +||+|||+++.
T Consensus       202 ~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~kL~DFG~a~~  240 (382)
T 3tt0_A          202 RGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARD  240 (382)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECTTCC-EEECSCSCCCC
T ss_pred             HHHHHHHhCCEecCCCCcceEEEcCCCc-EEEcccCcccc
Confidence            7899999999999999999999999998 99999999985

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.66  E-value=1.2e-16  Score=113.76  Aligned_cols=86  Identities=24%  Similarity=0.403  Sum_probs=66.1

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc-------cccCc----hhHHHHHHH----------------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS-------ITNDT----NSILRFLLL----------------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~~----~~~~~~~~~----------------------------   66 (127)
                      ...++|++.+.||+|+||.||+|++.+       +....    ..+.+++..                            
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv   84 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI   84 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence            456789999999999999999999866       11111    122222222                            


Q ss_pred             --hhcchh-----------------------HHHHHHH--------HCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --LLCAGD-----------------------ACLTFLH--------RHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~-----------------------~al~~lH--------~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                        |+.+|+                       .|+.|||        +++++||||||+||+++.++. +||+|||+++.
T Consensus        85 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~-~kl~Dfg~a~~  162 (301)
T 3q4u_A           85 THYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ-CCIADLGLAVM  162 (301)
T ss_dssp             ECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSC-EEECCCTTCEE
T ss_pred             hhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCC-EEEeeCCCeee
Confidence              333333                       7899999        999999999999999999998 99999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.66  E-value=1.7e-16  Score=114.65  Aligned_cols=90  Identities=20%  Similarity=0.307  Sum_probs=68.9

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc-------cccCch------hHH---------------------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------ITNDTN------SIL---------------------------   61 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~~~------~~~---------------------------   61 (127)
                      ..+.+..++|++.+.||+|+||.||+|++.+       +.....      .|+                           
T Consensus        17 ~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   96 (322)
T 3soc_A           17 ENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD   96 (322)
T ss_dssp             CCEEETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cccccchhhchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence            3455777889999999999999999999876       100000      111                           


Q ss_pred             -HHHHHhhcchh-----------------------HHHHHHHHC----------CcEecCCCCCCEEEecCCCeEEEEec
Q psy7471          62 -RFLLLLLCAGD-----------------------ACLTFLHRH----------GVVYRDLKLDNILLDAGGSLLKLADF  107 (127)
Q Consensus        62 -~~~~~~~~~g~-----------------------~al~~lH~~----------~iih~dlk~~nil~~~~~~~~kl~df  107 (127)
                       +++++|+.+|+                       .|+.|||+.          +++|+||||+||+++.++. +||+||
T Consensus        97 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~-~kL~DF  175 (322)
T 3soc_A           97 LWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLT-ACIADF  175 (322)
T ss_dssp             EEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCC-EEECCC
T ss_pred             EEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCe-EEEccC
Confidence             12222444443                       789999999          9999999999999999998 999999


Q ss_pred             cccee
Q psy7471         108 GRCAR  112 (127)
Q Consensus       108 g~a~~  112 (127)
                      |+++.
T Consensus       176 g~a~~  180 (322)
T 3soc_A          176 GLALK  180 (322)
T ss_dssp             TTCEE
T ss_pred             Ccccc
Confidence            99976

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.66  E-value=1.5e-17  Score=119.56  Aligned_cols=39  Identities=36%  Similarity=0.649  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       175 ~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~kL~DfG~a~~  213 (332)
T 3qd2_B          175 EAVEFLHSKGLMHRDLKPSNIFFTMDDV-VKVGDFGLVTA  213 (332)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHhCCeeecCCCcccEEEeCCCC-EEEeecCcccc
Confidence            6899999999999999999999999998 99999999987

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.66  E-value=2.5e-16  Score=113.52  Aligned_cols=86  Identities=21%  Similarity=0.424  Sum_probs=65.4

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------ccc----CchhHHHHHHH---------------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITN----DTNSILRFLLL---------------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----~~~~~~~~~~~---------------------------   66 (127)
                      ..++|++.+.||+|+||.||+|++..         +..    ....|..++..                           
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e  113 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  113 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence            34779999999999999999998865         110    11234444433                           


Q ss_pred             hhcchh---------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD---------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~---------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+++                     .|+.|||+++++|+||||+||+++.++..++|+|||+++.
T Consensus       114 ~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~  180 (330)
T 3nsz_A          114 HVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF  180 (330)
T ss_dssp             CCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             ccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence            222222                     7899999999999999999999997773399999999986

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.66  E-value=1.8e-16  Score=116.04  Aligned_cols=85  Identities=28%  Similarity=0.447  Sum_probs=60.7

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------ccc-----CchhHHHHHHH------------------------hh
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITN-----DTNSILRFLLL------------------------LL   68 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~-----~~~~~~~~~~~------------------------~~   68 (127)
                      ..+.|++.+.||+|+||.||+|+++.         +..     ....|+.++..                        |+
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  130 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV  130 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence            34679999999999999999999875         000     01123333333                        34


Q ss_pred             cchh------------------------HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          69 CAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        69 ~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                      .+++                        .|+.|||+++++|+||||+||+++.   ++. +||+|||+++.
T Consensus       131 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~-~kl~Dfg~a~~  200 (349)
T 2w4o_A          131 TGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAP-LKIADFGLSKI  200 (349)
T ss_dssp             CSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCC-EEECCCC----
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCC-EEEccCccccc
Confidence            3333                        7899999999999999999999975   667 99999999886

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.66  E-value=2.7e-16  Score=112.50  Aligned_cols=84  Identities=27%  Similarity=0.440  Sum_probs=65.1

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------ccc-C-c-------hhHHHHHHH-----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITN-D-T-------NSILRFLLL-----------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~-~-~-------~~~~~~~~~-----------------------   66 (127)
                      +++|++.+.||+|+||.||+|++..         +.. . .       ..|..++..                       
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            5789999999999999999999875         100 0 0       123333333                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+++                        .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~kl~Dfg~~~~  151 (311)
T 4agu_A           82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSV-IKLCDFGFARL  151 (311)
T ss_dssp             ECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCC-EEEeeCCCchh
Confidence             333332                        7899999999999999999999999998 99999999976

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.65  E-value=3.7e-16  Score=111.32  Aligned_cols=39  Identities=28%  Similarity=0.484  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       137 ~~l~~lH~~~i~H~dikp~Nil~~~~~~-~kl~Dfg~~~~  175 (302)
T 4e5w_A          137 KGMDYLGSRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKA  175 (302)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEEEETTE-EEECCCTTCEE
T ss_pred             HHHHHhhcCCcccCCCchheEEEcCCCC-EEECccccccc
Confidence            7899999999999999999999999998 99999999986

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.65  E-value=1.2e-16  Score=115.68  Aligned_cols=91  Identities=24%  Similarity=0.419  Sum_probs=67.4

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc---------cc--cCc-------hhHHHHHHH----------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT--NDT-------NSILRFLLL----------------   66 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--~~~-------~~~~~~~~~----------------   66 (127)
                      .......+++|++.+.||+|+||.||+|++..         +.  ...       ..|..++..                
T Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   96 (331)
T 4aaa_A           17 ENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK   96 (331)
T ss_dssp             --CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             chhhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC
Confidence            33445678999999999999999999999875         10  011       123333333                


Q ss_pred             --------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                              |+.+++                        .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus        97 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~-~kl~Dfg~~~~  173 (331)
T 4aaa_A           97 KRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGV-VKLCDFGFART  173 (331)
T ss_dssp             TEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC-EEECCCTTC--
T ss_pred             CEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCc-EEEEeCCCcee
Confidence                    222222                        7899999999999999999999999998 99999999875

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.65  E-value=5.4e-16  Score=111.37  Aligned_cols=39  Identities=36%  Similarity=0.674  Sum_probs=35.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus       127 ~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~kl~Dfg~a~~  165 (311)
T 3ork_A          127 QALNFSHQNGIIHRDVKPANIMISATNA-VKVMDFGIARA  165 (311)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEEETTSC-EEECCCSCC--
T ss_pred             HHHHHHHHCCCCcCCCCHHHEEEcCCCC-EEEeeccCccc
Confidence            7899999999999999999999999999 99999999875

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.65  E-value=1.4e-16  Score=112.59  Aligned_cols=88  Identities=32%  Similarity=0.537  Sum_probs=66.9

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc------ccc-------------CchhHHHHHHH------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS------ITN-------------DTNSILRFLLL------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~~-------------~~~~~~~~~~~------------------   66 (127)
                      ..+.+++|++.+.||+|+||.||+|+++.      +..             ....+..++..                  
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   83 (279)
T 3fdn_A            4 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR   83 (279)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             ceeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCE
Confidence            35678999999999999999999998875      000             00112222221                  


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            |+.+++                        .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus        84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~-~~l~Dfg~~~~  158 (279)
T 3fdn_A           84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE-LKIADFGWSVH  158 (279)
T ss_dssp             EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSC-EEECSCCEESC
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCC-EEEEecccccc
Confidence                  333322                        7899999999999999999999999999 99999998765

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.65  E-value=1.1e-16  Score=115.95  Aligned_cols=92  Identities=24%  Similarity=0.330  Sum_probs=62.8

Q ss_pred             CCCCCcccCCCeEEEEEeceeCCceEEEEEEcc---------cc---------cCchhHHHHHHH---------------
Q psy7471          20 SGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT---------NDTNSILRFLLL---------------   66 (127)
Q Consensus        20 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~---------~~~~~~~~~~~~---------------   66 (127)
                      +........++|++.+.||+|+||.||+|++..         +.         .....|..++..               
T Consensus        25 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  104 (329)
T 3gbz_A           25 SAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH  104 (329)
T ss_dssp             -------CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE
T ss_pred             ccCCcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec
Confidence            344556778899999999999999999998865         10         011133333332               


Q ss_pred             ---------hhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEe-----cCCCeEEEEeccc
Q psy7471          67 ---------LLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLD-----AGGSLLKLADFGR  109 (127)
Q Consensus        67 ---------~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~-----~~~~~~kl~dfg~  109 (127)
                               |+.+.-                       .|+.|||+++|+|+||||+||+++     .... +||+|||+
T Consensus       105 ~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~-~kl~Dfg~  183 (329)
T 3gbz_A          105 NHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPV-LKIGDFGL  183 (329)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCE-EEECCTTH
T ss_pred             CCEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccce-EEECcCCC
Confidence                     222100                       789999999999999999999995     3344 99999999


Q ss_pred             cee
Q psy7471         110 CAR  112 (127)
Q Consensus       110 a~~  112 (127)
                      ++.
T Consensus       184 a~~  186 (329)
T 3gbz_A          184 ARA  186 (329)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.65  E-value=4.4e-16  Score=110.40  Aligned_cols=83  Identities=23%  Similarity=0.436  Sum_probs=62.4

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc--------------cccCchhHHHHHHH-------------------------hh
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS--------------ITNDTNSILRFLLL-------------------------LL   68 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~~~~~~~~~~~~-------------------------~~   68 (127)
                      .++|++.+.||+|+||.||+|++..              .......+..++..                         |+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence            4789999999999999999999754              11112234444333                         22


Q ss_pred             cchh-------------------------HHHHHHHHCCcEecCCCCCCEEE---ecCCCeEEEEeccccee
Q psy7471          69 CAGD-------------------------ACLTFLHRHGVVYRDLKLDNILL---DAGGSLLKLADFGRCAR  112 (127)
Q Consensus        69 ~~g~-------------------------~al~~lH~~~iih~dlk~~nil~---~~~~~~~kl~dfg~a~~  112 (127)
                       +++                         .|+.|||+++++|+||||+||++   +..+. +||+|||+++.
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~-~kL~Dfg~a~~  157 (296)
T 4hgt_A           88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNL-VYIIDFGLAKK  157 (296)
T ss_dssp             -CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTC-EEECCCTTCEE
T ss_pred             -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCe-EEEecCcccee
Confidence             221                         78999999999999999999999   67777 99999999986

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.65  E-value=1.6e-16  Score=117.06  Aligned_cols=39  Identities=28%  Similarity=0.474  Sum_probs=34.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||+||+++.   ... +||+|||+++.
T Consensus       192 ~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~-~kL~DFG~a~~  233 (367)
T 3l9p_A          192 CGCQYLEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGMARD  233 (367)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEESCSSTTCC-EEECCCHHHHH
T ss_pred             HHHHHHHhCCeeCCCCChhhEEEecCCCCce-EEECCCccccc
Confidence            6899999999999999999999984   345 99999999874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.65  E-value=3.4e-16  Score=117.22  Aligned_cols=84  Identities=29%  Similarity=0.569  Sum_probs=65.8

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------ccc---------------CchhHHHHHHH-----------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITN---------------DTNSILRFLLL-----------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~---------------~~~~~~~~~~~-----------------   66 (127)
                      .++|++.+.||+|+||.||+|+++.         +..               ....|..++..                 
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~  213 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED  213 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSE
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCc
Confidence            4789999999999999999998865         000               11245555554                 


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecC---CCeEEEEeccccee
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAG---GSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~---~~~~kl~dfg~a~~  112 (127)
                            |+.+|+                        .|+.|||+++|+||||||+||+++..   .. +||+|||+++.
T Consensus       214 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~-~kl~DFG~a~~  291 (419)
T 3i6u_A          214 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL-IKITDFGHSKI  291 (419)
T ss_dssp             EEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCC-EEECCSSTTTS
T ss_pred             eEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcce-EEEeeccccee
Confidence                  444443                        78999999999999999999999743   34 99999999986

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.65  E-value=1.8e-16  Score=116.11  Aligned_cols=87  Identities=22%  Similarity=0.363  Sum_probs=65.1

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc------cc--------c-------CchhHHHHHHH------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS------IT--------N-------DTNSILRFLLL------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~--------~-------~~~~~~~~~~~------------------   66 (127)
                      ...+.|++.+.||+|+||.||+|+++.      +.        .       ....|..++..                  
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  100 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM  100 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            344679999999999999999999875      00        0       01134444433                  


Q ss_pred             ------hhcchh----------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC--eEEEEecccc
Q psy7471          67 ------LLCAGD----------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS--LLKLADFGRC  110 (127)
Q Consensus        67 ------~~~~g~----------------------------~al~~lH~~~iih~dlk~~nil~~~~~~--~~kl~dfg~a  110 (127)
                            |+.+++                            .||.|||+++|+||||||+||+++.++.  .+||+|||++
T Consensus       101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence                  344332                            7899999999999999999999975432  3999999999


Q ss_pred             ee
Q psy7471         111 AR  112 (127)
Q Consensus       111 ~~  112 (127)
                      +.
T Consensus       181 ~~  182 (351)
T 3c0i_A          181 IQ  182 (351)
T ss_dssp             EE
T ss_pred             eE
Confidence            87

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.65  E-value=2.7e-17  Score=117.10  Aligned_cols=39  Identities=33%  Similarity=0.473  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       139 ~~l~~lH~~~i~H~dikp~Nil~~~~~~-~kl~Dfg~a~~  177 (298)
T 3f66_A          139 KGMKYLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARD  177 (298)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECTTCC-EEECSCGGGCC
T ss_pred             HHHHHHHhCCccCCCCchheEEECCCCC-EEECccccccc
Confidence            7899999999999999999999999998 99999999975

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.65  E-value=2.8e-16  Score=116.14  Aligned_cols=39  Identities=41%  Similarity=0.681  Sum_probs=37.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       120 ~~L~~LH~~~ivHrDlkp~NIll~~~~~-~kl~DFG~a~~  158 (388)
T 3oz6_A          120 KVIKYLHSGGLLHRDMKPSNILLNAECH-VKVADFGLSRS  158 (388)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHhCCEEeCCCCHHHeEEcCCCC-EEecCCccccc
Confidence            7899999999999999999999999999 99999999986

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=2e-17  Score=119.38  Aligned_cols=85  Identities=26%  Similarity=0.450  Sum_probs=65.1

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc-------cccCch----hHH------------------------------HHHH
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS-------ITNDTN----SIL------------------------------RFLL   65 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~~~----~~~------------------------------~~~~   65 (127)
                      ..++|++.+.||+|+||.||+|++.+       +.....    .+.                              ++++
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~  114 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLIT  114 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEE
Confidence            34789999999999999999999876       000000    111                              1222


Q ss_pred             Hhhcchh-----------------------HHHHHHHHC--------CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          66 LLLCAGD-----------------------ACLTFLHRH--------GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        66 ~~~~~g~-----------------------~al~~lH~~--------~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +|+.+|+                       .|+.|||.+        +++||||||+||+++.++. +||+|||+++.
T Consensus       115 e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~-~kl~Dfg~a~~  191 (337)
T 3mdy_A          115 DYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT-CCIADLGLAVK  191 (337)
T ss_dssp             CCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC-EEECCCTTCEE
T ss_pred             eccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC-EEEEeCCCcee
Confidence            2444443                       789999998        9999999999999999998 99999999976

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=2.6e-17  Score=121.80  Aligned_cols=39  Identities=36%  Similarity=0.489  Sum_probs=33.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       203 ~aL~~LH~~~ivHrDlkp~NIll~~~~~-~kL~DFG~a~~  241 (373)
T 3c1x_A          203 KGMKFLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARD  241 (373)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECTTCC-EEECCC-----
T ss_pred             HHHHHHHHCCEecCccchheEEECCCCC-EEEeecccccc
Confidence            7899999999999999999999999998 99999999975

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.64  E-value=5.2e-16  Score=114.65  Aligned_cols=88  Identities=22%  Similarity=0.351  Sum_probs=67.7

Q ss_pred             CcccCCCeEEEEEecee--CCceEEEEEEcc---------ccc--C-c------hhHHHHHHH-----------------
Q psy7471          24 RKVGLEDFHFIKVLGKG--SFGKELFGHYRS---------ITN--D-T------NSILRFLLL-----------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G--~fg~V~~~~~~~---------~~~--~-~------~~~~~~~~~-----------------   66 (127)
                      .....++|++.+.||+|  +||.||+|+++.         +..  . .      ..|..++..                 
T Consensus        20 ~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   99 (389)
T 3gni_B           20 FLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN   99 (389)
T ss_dssp             CCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC
Confidence            34567889999999999  999999999975         100  0 1      123333333                 


Q ss_pred             -------hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+.+|+                          .||.|||+++|+||||||+||+++.++. +||+|||++..
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~-~kl~dfg~~~~  177 (389)
T 3gni_B          100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK-VYLSGLRSNLS  177 (389)
T ss_dssp             EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC-EEECCGGGCEE
T ss_pred             EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEccccccee
Confidence                   343333                          7899999999999999999999999998 99999998764

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.64  E-value=1.1e-15  Score=109.77  Aligned_cols=39  Identities=26%  Similarity=0.434  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       149 ~~l~~lH~~~i~H~dikp~NIli~~~~~-~kl~Dfg~~~~  187 (322)
T 1p4o_A          149 DGMAYLNANKFVHRDLAARNCMVAEDFT-VKIGDFGMTRD  187 (322)
T ss_dssp             HHHHHHHHTTCBCSCCSGGGEEECTTCC-EEECCTTCCCG
T ss_pred             HHHHHHHHCCCccCCCccceEEEcCCCe-EEECcCccccc
Confidence            6899999999999999999999999998 99999999875

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.64  E-value=2.1e-16  Score=113.84  Aligned_cols=86  Identities=23%  Similarity=0.376  Sum_probs=64.8

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------ccc-----C----chhHHHHHHH----------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------ITN-----D----TNSILRFLLL----------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~-----~----~~~~~~~~~~----------------------   66 (127)
                      ...++|++.+.||+|+||.||+|+++.        ...     .    ...|..++..                      
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence            445779999999999999999999975        000     0    0133333333                      


Q ss_pred             ----hhcchh---------------------------HHHHHHHHCCcEecCCCCCCEEE----ecCCCeEEEEecccce
Q psy7471          67 ----LLCAGD---------------------------ACLTFLHRHGVVYRDLKLDNILL----DAGGSLLKLADFGRCA  111 (127)
Q Consensus        67 ----~~~~g~---------------------------~al~~lH~~~iih~dlk~~nil~----~~~~~~~kl~dfg~a~  111 (127)
                          |+.+++                           .|+.|||+++|+|+||||+||++    +.... +||+|||+++
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~-~kL~Dfg~a~  164 (319)
T 4euu_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSV-YKLTDFGAAR  164 (319)
T ss_dssp             EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEE-EEECCCTTCE
T ss_pred             EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCce-EEEccCCCce
Confidence                333332                           78999999999999999999998    55555 9999999998


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      .
T Consensus       165 ~  165 (319)
T 4euu_A          165 E  165 (319)
T ss_dssp             E
T ss_pred             e
Confidence            7

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.64  E-value=4.4e-16  Score=110.68  Aligned_cols=39  Identities=38%  Similarity=0.658  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus       111 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~  149 (288)
T 1ob3_A          111 NGIAYCHDRRVLHRDLKPQNLLINREGE-LKIADFGLARA  149 (288)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECTTSC-EEECCTTHHHH
T ss_pred             HHHHHHHHCCeecCCCCHHHEEEcCCCC-EEEeECccccc
Confidence            7899999999999999999999999999 99999999875

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.64  E-value=6.8e-16  Score=115.89  Aligned_cols=39  Identities=38%  Similarity=0.609  Sum_probs=37.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||.|||++.++. +||+|||+++.
T Consensus       140 ~aL~~LH~~givHrDlkp~NILl~~~~~-~kL~DFGla~~  178 (432)
T 3n9x_A          140 LGENFIHESGIIHRDLKPANCLLNQDCS-VKVCDFGLART  178 (432)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCCCCCCCCHHHeEECCCCC-EEEccCCCccc
Confidence            7899999999999999999999999999 99999999987

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.64  E-value=7.4e-16  Score=111.44  Aligned_cols=39  Identities=46%  Similarity=0.727  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+|+||||.||+++.++. +||+|||+++.
T Consensus       111 ~aL~~LH~~~ivH~Dikp~NIl~~~~~~-~kl~Dfg~a~~  149 (324)
T 3mtl_A          111 RGLAYCHRQKVLHRDLKPQNLLINERGE-LKLADFGLARA  149 (324)
T ss_dssp             HHHHHHHHTTEEESSCCGGGEEECTTCC-EEECSSSEEEC
T ss_pred             HHHHHHHHCCccCCCcCHHHEEECCCCC-EEEccCccccc
Confidence            7899999999999999999999999998 99999999875

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.64  E-value=2e-16  Score=116.42  Aligned_cols=84  Identities=29%  Similarity=0.487  Sum_probs=64.3

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cccC---------chhHHHHHHH-----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITND---------TNSILRFLLL-----------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~---------~~~~~~~~~~-----------------------   66 (127)
                      .++|++.+.||+|+||.||+|.++.         +...         ...|..++..                       
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4579999999999999999999875         1100         1134444433                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecC---CCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAG---GSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~---~~~~kl~dfg~a~~  112 (127)
                       |+.+|+                        .|+.|||+++|+||||||+||+++..   .. +||+|||+++.
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~-~kl~DfG~a~~  180 (362)
T 2bdw_A          108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA-VKLADFGLAIE  180 (362)
T ss_dssp             CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCC-EEECCCTTCBC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCC-EEEeecCcceE
Confidence             444443                        78999999999999999999999854   34 99999999986

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.64  E-value=2.8e-17  Score=118.45  Aligned_cols=39  Identities=38%  Similarity=0.572  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       150 ~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~kl~Dfg~~~~  188 (321)
T 2qkw_B          150 RGLHYLHTRAIIHRDVKSINILLDENFV-PKITDFGISKK  188 (321)
T ss_dssp             HHHHHHHHTTEECSCCCSTTEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHhcCCCeecCCCCHHHEEECCCCC-EEEeecccccc
Confidence            6899999999999999999999999998 99999999986

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.64  E-value=5.6e-16  Score=112.32  Aligned_cols=85  Identities=26%  Similarity=0.346  Sum_probs=66.4

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------ccc-------------CchhHHHHHHH------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITN-------------DTNSILRFLLL------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~-------------~~~~~~~~~~~------------------   66 (127)
                      ..+.|++.+.||+|+||.||+|+++.         +..             ....|..++..                  
T Consensus         9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   88 (326)
T 2y0a_A            9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   88 (326)
T ss_dssp             HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            34679999999999999999999875         100             01244445544                  


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCC----CeEEEEeccccee
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGG----SLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~----~~~kl~dfg~a~~  112 (127)
                            |+.+++                        .|+.|||+++++|+||||+||+++.++    . +||+|||+++.
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~-~kl~Dfg~a~~  167 (326)
T 2y0a_A           89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHK  167 (326)
T ss_dssp             EEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCC-EEECCCTTCEE
T ss_pred             EEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCC-EEEEECCCCeE
Confidence                  333433                        789999999999999999999998776    6 99999999986

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.64  E-value=4.7e-16  Score=110.10  Aligned_cols=88  Identities=30%  Similarity=0.548  Sum_probs=67.4

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc------cc---------c----CchhHHHHHHH------------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS------IT---------N----DTNSILRFLLL------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~---------~----~~~~~~~~~~~------------------   66 (127)
                      ..+..++|++.+.||+|+||.||+|++..      +.         .    ....+..++..                  
T Consensus         9 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   88 (284)
T 2vgo_A            9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR   88 (284)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             cchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCE
Confidence            45678899999999999999999999875      00         0    01123333332                  


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            |+.+++                        .|+.|||+++++|+||+|+||+++.++. ++|+|||++..
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~kl~Dfg~~~~  163 (284)
T 2vgo_A           89 IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE-LKIADFGWSVH  163 (284)
T ss_dssp             EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             EEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCC-EEEeccccccc
Confidence                  333322                        7899999999999999999999999998 99999999876

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.64  E-value=3.3e-16  Score=110.91  Aligned_cols=91  Identities=22%  Similarity=0.382  Sum_probs=71.3

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc---------cccCc------hhHHHHHHH-------------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITNDT------NSILRFLLL-------------------   66 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~~------~~~~~~~~~-------------------   66 (127)
                      -..|++..++|++.+.||+|+||.||+|+++.         +....      ..|..++..                   
T Consensus         5 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A            5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             CCTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             hhcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence            35678889999999999999999999999985         11111      133333333                   


Q ss_pred             -----hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.+++                          .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus        85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~-~~l~Dfg~~~~  160 (288)
T 3kfa_A           85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRL  160 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGC-EEECCCCGGGT
T ss_pred             EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCC-EEEccCcccee
Confidence                 333322                          7899999999999999999999999998 99999999875

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.63  E-value=2.6e-16  Score=116.25  Aligned_cols=91  Identities=23%  Similarity=0.349  Sum_probs=63.8

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc------------ccc--Cch------hHHHHHHH--------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS------------ITN--DTN------SILRFLLL--------------   66 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~~--~~~------~~~~~~~~--------------   66 (127)
                      ....++..++|++.+.||+|+||.||+|+++.            +..  ...      .|..++..              
T Consensus        37 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~  116 (373)
T 2qol_A           37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT  116 (373)
T ss_dssp             TTSCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             HHHhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            44456777899999999999999999998761            100  111      22222221              


Q ss_pred             ----------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccce
Q psy7471          67 ----------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA  111 (127)
Q Consensus        67 ----------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~  111 (127)
                                |+.+|+                         .|+.|||+++|+||||||.||+++.++. +||+|||+++
T Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~  195 (373)
T 2qol_A          117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV-CKVSDFGLGR  195 (373)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC-EEECCC----
T ss_pred             eCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCC-EEECcCcccc
Confidence                      343433                         7899999999999999999999999998 9999999988


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      .
T Consensus       196 ~  196 (373)
T 2qol_A          196 V  196 (373)
T ss_dssp             -
T ss_pred             c
Confidence            6

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.63  E-value=3.2e-16  Score=109.75  Aligned_cols=89  Identities=21%  Similarity=0.385  Sum_probs=68.5

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc--------cccC------chhHHHHHHH----------------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITND------TNSILRFLLL----------------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~------~~~~~~~~~~----------------------   66 (127)
                      .|.+..++|++.+.||+|+||.||+|++..        +...      ...|..++..                      
T Consensus         2 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (267)
T 3t9t_A            2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV   81 (267)
T ss_dssp             -CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             ceEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence            467788999999999999999999999865        1111      0123333332                      


Q ss_pred             --hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                        |+.+++                         .|+.|||+++++|+||+|+||+++.++. ++|+|||+++.
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~-~kl~dfg~~~~  153 (267)
T 3t9t_A           82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-IKVSDFGMTRF  153 (267)
T ss_dssp             ECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGC-EEECCTTGGGG
T ss_pred             EeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCC-EEEcccccccc
Confidence              333322                         7899999999999999999999999998 99999999875

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=8.3e-16  Score=113.27  Aligned_cols=39  Identities=33%  Similarity=0.623  Sum_probs=37.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||.||+++.++. +||+|||+++.
T Consensus       139 ~~L~~LH~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~~  177 (367)
T 1cm8_A          139 KGLRYIHAAGIIHRDLKPGNLAVNEDCE-LKILDFGLARQ  177 (367)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCccccCcCHHHEEEcCCCC-EEEEeeecccc
Confidence            7899999999999999999999999998 99999999987

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=1.1e-15  Score=111.01  Aligned_cols=91  Identities=23%  Similarity=0.303  Sum_probs=66.0

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc-------------ccc--Cch------hHHHHHHH-------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------------ITN--DTN------SILRFLLL-------------   66 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------~~~--~~~------~~~~~~~~-------------   66 (127)
                      ...+++..++|++.+.||+|+||.||+|+++.             ...  ...      .|..++..             
T Consensus        36 ~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  115 (333)
T 1mqb_A           36 KFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI  115 (333)
T ss_dssp             --CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            44567788999999999999999999998753             100  111      22222222             


Q ss_pred             -----------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccc
Q psy7471          67 -----------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC  110 (127)
Q Consensus        67 -----------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a  110 (127)
                                 |+.+++                         .|+.|||+++++|+||||.||+++.++. +||+|||++
T Consensus       116 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~-~kl~Dfg~~  194 (333)
T 1mqb_A          116 SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV-CKVSDFGLS  194 (333)
T ss_dssp             CSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC-EEECCCCC-
T ss_pred             ecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCc-EEECCCCcc
Confidence                       333322                         7899999999999999999999999998 999999998


Q ss_pred             ee
Q psy7471         111 AR  112 (127)
Q Consensus       111 ~~  112 (127)
                      +.
T Consensus       195 ~~  196 (333)
T 1mqb_A          195 RV  196 (333)
T ss_dssp             --
T ss_pred             hh
Confidence            76

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.63  E-value=1.4e-15  Score=108.72  Aligned_cols=88  Identities=26%  Similarity=0.433  Sum_probs=66.1

Q ss_pred             CcccCCCeEEE-EEeceeCCceEEEEEEcc---------cccC--chhHHHHHHH-------------------------
Q psy7471          24 RKVGLEDFHFI-KVLGKGSFGKELFGHYRS---------ITND--TNSILRFLLL-------------------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~-~~lg~G~fg~V~~~~~~~---------~~~~--~~~~~~~~~~-------------------------   66 (127)
                      .....++|.+. ++||+|+||.||+|+++.         +...  ...+..++..                         
T Consensus        12 ~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           12 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            34567889887 789999999999999865         1111  1123333322                         


Q ss_pred             ----hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          67 ----LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                          |+.+++                          .|+.|||+++++|+||||+||+++.   ++. ++|+|||+++.
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~-~kl~Dfg~a~~  169 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI-LKLTDFGFAKE  169 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCC-EEECCCTTCEE
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCc-EEEeccccccc
Confidence                333332                          7899999999999999999999998   677 99999999987

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.63  E-value=6.7e-16  Score=111.13  Aligned_cols=39  Identities=26%  Similarity=0.447  Sum_probs=34.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus       148 ~al~~LH~~~ivH~Dikp~NIli~~~~~-~kl~Dfg~a~~  186 (323)
T 3qup_A          148 CGMEYLSSRNFIHRDLAARNCMLAEDMT-VCVADFGLSRK  186 (323)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECTTSC-EEECCCCC---
T ss_pred             HHHHHHHcCCcccCCCCcceEEEcCCCC-EEEeecccccc
Confidence            7899999999999999999999999998 99999999976

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.63  E-value=4.4e-16  Score=118.91  Aligned_cols=85  Identities=24%  Similarity=0.377  Sum_probs=65.4

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------------cccCchhHHHHHHH-------------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------------ITNDTNSILRFLLL-------------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~~~~~~~~~~~~-------------------------   66 (127)
                      ...++|++.+.||+|+||.||+|++..              .......|..++..                         
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            345789999999999999999999864              00112234444433                         


Q ss_pred             hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEE---ecCCCeEEEEeccccee
Q psy7471          67 LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILL---DAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~---~~~~~~~kl~dfg~a~~  112 (127)
                      |+ +++                         .||.|||.++|+||||||+|||+   +..+. +||+|||+++.
T Consensus        84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~-vkL~DFGla~~  155 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ-VYIIDFGLAKK  155 (483)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTC-EEECCCTTCEE
T ss_pred             CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCe-EEEEeCCccee
Confidence            22 221                         78999999999999999999999   56777 99999999987

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.63  E-value=4.8e-16  Score=109.92  Aligned_cols=89  Identities=28%  Similarity=0.442  Sum_probs=68.1

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc------------cccC--ch------hHHHHHHH----------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS------------ITND--TN------SILRFLLL----------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~~~--~~------~~~~~~~~----------------   66 (127)
                      .+.+..++|++.+.||+|+||.||+|++..            ....  ..      .|..++..                
T Consensus         6 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   85 (281)
T 3cc6_A            6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE   85 (281)
T ss_dssp             CCSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS
T ss_pred             cceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC
Confidence            456778999999999999999999998653            1110  01      23333332                


Q ss_pred             -------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+.+++                         .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus        86 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~  162 (281)
T 3cc6_A           86 PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC-VKLGDFGLSRY  162 (281)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTE-EEECCCCGGGC
T ss_pred             CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCc-EEeCccCCCcc
Confidence                   233322                         7899999999999999999999999988 99999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.63  E-value=2.7e-16  Score=116.74  Aligned_cols=86  Identities=23%  Similarity=0.379  Sum_probs=64.9

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------ccc----C----chhHHHHHHH----------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN----D----TNSILRFLLL----------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----~----~~~~~~~~~~----------------------   66 (127)
                      ...++|++.+.||+|+||.||+|+++.         +..    .    ...|..++..                      
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~   85 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence            345679999999999999999999975         000    0    0133334333                      


Q ss_pred             ----hhcchh---------------------------HHHHHHHHCCcEecCCCCCCEEE----ecCCCeEEEEecccce
Q psy7471          67 ----LLCAGD---------------------------ACLTFLHRHGVVYRDLKLDNILL----DAGGSLLKLADFGRCA  111 (127)
Q Consensus        67 ----~~~~g~---------------------------~al~~lH~~~iih~dlk~~nil~----~~~~~~~kl~dfg~a~  111 (127)
                          |+.+|+                           .|+.|||+++|+|+||||+||++    +.... +||+|||+++
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~-~kL~DFG~a~  164 (396)
T 4eut_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSV-YKLTDFGAAR  164 (396)
T ss_dssp             EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEE-EEECCGGGCE
T ss_pred             EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCcee-EEEecCCCce
Confidence                333332                           78999999999999999999998    55555 9999999998


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      .
T Consensus       165 ~  165 (396)
T 4eut_A          165 E  165 (396)
T ss_dssp             E
T ss_pred             E
Confidence            7

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.63  E-value=1.2e-15  Score=114.59  Aligned_cols=40  Identities=40%  Similarity=0.675  Sum_probs=36.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCC-eEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGS-LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~-~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.++. .+||+|||++..
T Consensus       211 ~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~  251 (429)
T 3kvw_A          211 QCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY  251 (429)
T ss_dssp             HHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             HHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence            7899999999999999999999997753 289999999976

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.63  E-value=4.7e-16  Score=111.35  Aligned_cols=39  Identities=33%  Similarity=0.536  Sum_probs=33.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       147 ~~l~~LH~~~i~H~dl~p~NIl~~~~~~-~kl~Dfg~~~~  185 (310)
T 2wqm_A          147 SALEHMHSRRVMHRDIKPANVFITATGV-VKLGDLGLGRF  185 (310)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECTTSC-EEECCC-----
T ss_pred             HHHHHHhhCCeeCCCCcHHHEEEcCCCC-EEEEeccceee
Confidence            7899999999999999999999999998 99999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.63  E-value=6.3e-16  Score=111.68  Aligned_cols=39  Identities=31%  Similarity=0.532  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       175 ~~l~~lH~~~ivH~Dlkp~NIl~~~~~~-~kl~Dfg~~~~  213 (333)
T 2i1m_A          175 QGMAFLASKNCIHRDVAARNVLLTNGHV-AKIGDFGLARD  213 (333)
T ss_dssp             HHHHHHHHTTEECSCCSGGGCEEEGGGE-EEBCCCGGGCC
T ss_pred             HHHHHHhcCCcccCCcccceEEECCCCe-EEECccccccc
Confidence            6899999999999999999999999888 99999999985

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.62  E-value=8e-16  Score=114.44  Aligned_cols=85  Identities=25%  Similarity=0.475  Sum_probs=64.5

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cccC-------chhHHHHHHH------------------------h
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITND-------TNSILRFLLL------------------------L   67 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~-------~~~~~~~~~~------------------------~   67 (127)
                      .+.|++.+.||+|+||.||+|+++.         +...       ...|+.++..                        |
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            4689999999999999999999875         1111       1123333322                        3


Q ss_pred             hcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEec--CCCeEEEEecccceec
Q psy7471          68 LCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDA--GGSLLKLADFGRCARK  113 (127)
Q Consensus        68 ~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~--~~~~~kl~dfg~a~~~  113 (127)
                      +.+|+                         .||.|||+++|+||||||+||+++.  .+. +||+|||+++..
T Consensus       130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~-vkL~DFG~a~~~  201 (387)
T 1kob_A          130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS-VKIIDFGLATKL  201 (387)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCC-EEECCCTTCEEC
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCc-eEEEecccceec
Confidence            44433                         7899999999999999999999974  356 999999999873

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.62  E-value=9.6e-16  Score=110.48  Aligned_cols=39  Identities=33%  Similarity=0.575  Sum_probs=37.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       145 ~~l~~LH~~~ivH~Dikp~Nil~~~~~~-~kl~Dfg~a~~  183 (318)
T 3lxp_A          145 EGMAYLHAQHYIHRDLAARNVLLDNDRL-VKIGDFGLAKA  183 (318)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEECTTCC-EEECCGGGCEE
T ss_pred             HHHHHHHhCCccCCCCchheEEEcCCCC-EEECCcccccc
Confidence            7899999999999999999999999998 99999999986

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.62  E-value=5.4e-16  Score=112.97  Aligned_cols=39  Identities=41%  Similarity=0.709  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+|+||||+||+++.++. +||+|||+++.
T Consensus       135 ~~l~~LH~~~ivH~Dlkp~NIl~~~~~~-~kl~Dfg~a~~  173 (351)
T 3mi9_A          135 NGLYYIHRNKILHRDMKAANVLITRDGV-LKLADFGLARA  173 (351)
T ss_dssp             HHHHHHHHTTEECCCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCeeCCCCCHHHEEEcCCCC-EEEccchhccc
Confidence            7899999999999999999999999998 99999999876

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.62  E-value=3.3e-16  Score=110.93  Aligned_cols=90  Identities=24%  Similarity=0.407  Sum_probs=63.3

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc------------cc----cCch------hHHHHHHH-------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS------------IT----NDTN------SILRFLLL-------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~----~~~~------~~~~~~~~-------------   66 (127)
                      ....+..++|++.+.||+|+||.||+|++..            ..    ...+      .+..++..             
T Consensus        11 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   90 (291)
T 1u46_A           11 LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV   90 (291)
T ss_dssp             CCEECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence            3445667899999999999999999998642            00    0111      23333332             


Q ss_pred             ----------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccce
Q psy7471          67 ----------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA  111 (127)
Q Consensus        67 ----------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~  111 (127)
                                |+.+++                         .|+.|||+++++|+||||.||+++.++. ++|+|||+++
T Consensus        91 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~-~kl~Dfg~~~  169 (291)
T 1u46_A           91 LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMR  169 (291)
T ss_dssp             CSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE-EEECCCTTCE
T ss_pred             ccCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCC-EEEccccccc
Confidence                      222222                         7899999999999999999999999888 9999999988


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      .
T Consensus       170 ~  170 (291)
T 1u46_A          170 A  170 (291)
T ss_dssp             E
T ss_pred             c
Confidence            6

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.62  E-value=1.1e-16  Score=118.35  Aligned_cols=39  Identities=36%  Similarity=0.736  Sum_probs=36.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec-CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA-GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~-~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||.||+++. ++. +||+|||+++.
T Consensus       152 ~aL~~LH~~gi~H~Dikp~Nil~~~~~~~-~kl~Dfg~a~~  191 (383)
T 3eb0_A          152 RAVGFIHSLGICHRDIKPQNLLVNSKDNT-LKLCDFGSAKK  191 (383)
T ss_dssp             HHHHHHHTTTEECSCCCGGGEEEETTTTE-EEECCCTTCEE
T ss_pred             HHHHHHHHCcCccCccCHHHEEEcCCCCc-EEEEECCCCcc
Confidence            7899999999999999999999984 566 99999999986

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.62  E-value=1.1e-15  Score=119.57  Aligned_cols=39  Identities=28%  Similarity=0.428  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.++. +||+|||+++.
T Consensus       447 ~~L~~LH~~~iiHrDlkp~NILl~~~~~-vkL~DFGla~~  485 (613)
T 2ozo_A          447 MGMKYLEEKNFVHRNLAARNVLLVNRHY-AKISDFGLSKA  485 (613)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEEEETTE-EEECCCSTTTT
T ss_pred             HHHHHHHHCCEEcCcCCHHHEEEcCCCc-EEEeeccCccc
Confidence            7899999999999999999999999988 99999999986

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=6.3e-16  Score=109.78  Aligned_cols=39  Identities=33%  Similarity=0.492  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       135 ~~l~~LH~~~i~H~dikp~Nili~~~~~-~kl~Dfg~~~~  173 (298)
T 3pls_A          135 RGMEYLAEQKFVHRDLAARNCMLDESFT-VKVADFGLARD  173 (298)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECTTCC-EEECCTTSSCT
T ss_pred             HHHHHHHhCCcccCCCCcceEEEcCCCc-EEeCcCCCccc
Confidence            7899999999999999999999999998 99999999874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.62  E-value=1.4e-15  Score=107.90  Aligned_cols=83  Identities=23%  Similarity=0.431  Sum_probs=63.7

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cc-----cCchhHHHHHHH-------------------------hh
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------IT-----NDTNSILRFLLL-------------------------LL   68 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~-----~~~~~~~~~~~~-------------------------~~   68 (127)
                      .++|++.+.||+|+||.||+|++..         +.     .....|..++..                         |+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            4789999999999999999999754         00     011233333333                         22


Q ss_pred             cchh-------------------------HHHHHHHHCCcEecCCCCCCEEEe---cCCCeEEEEeccccee
Q psy7471          69 CAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLD---AGGSLLKLADFGRCAR  112 (127)
Q Consensus        69 ~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~---~~~~~~kl~dfg~a~~  112 (127)
                       +++                         .|+.|||+++++|+||||+||+++   .++. +||+|||+++.
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~-~kl~Dfg~~~~  157 (296)
T 3uzp_A           88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNL-VYIIDFGLAKK  157 (296)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTC-EEECCCTTCEE
T ss_pred             -CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCe-EEEeeCCCccc
Confidence             221                         789999999999999999999994   6777 99999999986

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.62  E-value=7e-16  Score=111.40  Aligned_cols=89  Identities=27%  Similarity=0.440  Sum_probs=67.7

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc-------------cccCc-------hhHHHHHHH----------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------------ITNDT-------NSILRFLLL----------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------~~~~~-------~~~~~~~~~----------------   66 (127)
                      ..-+..++|++.+.||+|+||.||+|++..             +....       ..|..++..                
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   96 (327)
T 3lxl_A           17 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP   96 (327)
T ss_dssp             CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             hhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Confidence            345677899999999999999999999632             11111       123333322                


Q ss_pred             ----------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccce
Q psy7471          67 ----------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA  111 (127)
Q Consensus        67 ----------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~  111 (127)
                                |+.+++                         .|+.|||+++++|+||||.||+++.++. ++|+|||+++
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~-~kl~Dfg~~~  175 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAK  175 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE-EEECCGGGCE
T ss_pred             CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCC-EEEcccccce
Confidence                      333332                         7899999999999999999999999998 9999999998


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      .
T Consensus       176 ~  176 (327)
T 3lxl_A          176 L  176 (327)
T ss_dssp             E
T ss_pred             e
Confidence            6

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.62  E-value=1.3e-15  Score=110.45  Aligned_cols=39  Identities=28%  Similarity=0.514  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       168 ~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~kL~Dfg~~~~  206 (334)
T 2pvf_A          168 RGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARD  206 (334)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHhCCeeCCCCccceEEEcCCCC-EEEcccccccc
Confidence            6899999999999999999999999998 99999999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.62  E-value=3.1e-16  Score=119.17  Aligned_cols=86  Identities=35%  Similarity=0.577  Sum_probs=65.7

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------c------ccC----chhHHHHHHH---------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------I------TND----TNSILRFLLL---------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~------~~~----~~~~~~~~~~---------------------   66 (127)
                      ...++|++.+.||+|+||+||+|+++.        .      ...    ...|..++..                     
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   98 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence            456789999999999999999999874        0      000    1134444443                     


Q ss_pred             ---hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          67 ---LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                         |+.+++                        .|+.|||+++|+||||||+||+++.   ... +||+|||+++.
T Consensus        99 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~-~kl~Dfg~a~~  173 (486)
T 3mwu_A           99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCD-IKIIDFGLSTC  173 (486)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCC-EEECSCSCTTT
T ss_pred             EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCC-EEEEECCcCeE
Confidence               444443                        7899999999999999999999964   445 99999999875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=7.7e-16  Score=111.68  Aligned_cols=39  Identities=33%  Similarity=0.536  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++++|+||||+||+++.++. ++|+|||+++.
T Consensus       183 ~aL~~LH~~~ivH~Dikp~NIll~~~~~-~kL~Dfg~~~~  221 (344)
T 1rjb_A          183 KGMEFLEFKSCVHRDLAARNVLVTHGKV-VKICDFGLARD  221 (344)
T ss_dssp             HHHHHHHHTTEEETTCSGGGEEEETTTE-EEECCCGGGSC
T ss_pred             HHHHHHHhCCcccCCCChhhEEEcCCCc-EEeCCCccCcc
Confidence            6899999999999999999999999988 99999999875

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.62  E-value=1.2e-16  Score=117.48  Aligned_cols=40  Identities=23%  Similarity=0.302  Sum_probs=37.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK  113 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~  113 (127)
                      .||.|||+++|+||||||+|||++.++. +||+|||+++..
T Consensus       205 ~aL~~LH~~~ivHrDikp~NIll~~~~~-~kL~DFG~a~~~  244 (371)
T 3q60_A          205 RLAANLQSKGLVHGHFTPDNLFIMPDGR-LMLGDVSALWKV  244 (371)
T ss_dssp             HHHHHHHHTTEEETTCSGGGEEECTTSC-EEECCGGGEEET
T ss_pred             HHHHHHHHCCCccCcCCHHHEEECCCCC-EEEEecceeeec
Confidence            7899999999999999999999999998 999999999873

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.62  E-value=3e-15  Score=108.36  Aligned_cols=39  Identities=38%  Similarity=0.603  Sum_probs=36.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEE-------------------ecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILL-------------------DAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~-------------------~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+|+||||.||++                   +.... +||+|||+++.
T Consensus       134 ~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~-~kl~Dfg~~~~  191 (355)
T 2eu9_A          134 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS-IRVADFGSATF  191 (355)
T ss_dssp             HHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCc-EEEeecCcccc
Confidence            78999999999999999999999                   55677 99999999986

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.62  E-value=8.2e-16  Score=112.66  Aligned_cols=39  Identities=44%  Similarity=0.731  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus       165 ~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~kL~DfG~a~~  203 (348)
T 1u5q_A          165 QGLAYLHSHNMIHRDVKAGNILLSEPGL-VKLGDFGSASI  203 (348)
T ss_dssp             HHHHHHHHTTCBCCCCSGGGEEEETTTE-EEECCCTTCBS
T ss_pred             HHHHHHHhCCeeeCCCCHHHEEECCCCC-EEEeeccCcee
Confidence            7899999999999999999999999888 99999999876

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.62  E-value=2e-15  Score=109.81  Aligned_cols=39  Identities=38%  Similarity=0.698  Sum_probs=35.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||||.||+++.   ... +||+|||+++.
T Consensus       139 ~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~-~kl~Dfg~~~~  180 (336)
T 3fhr_A          139 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAV-LKLTDFGFAKE  180 (336)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEESCSSTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEEecCCCce-EEEecccccee
Confidence            7899999999999999999999975   445 99999999986

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.62  E-value=1.4e-15  Score=110.40  Aligned_cols=39  Identities=38%  Similarity=0.677  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       152 ~aL~~LH~~~ivH~dlkp~NIl~~~~~~-~kl~Dfg~~~~  190 (335)
T 2owb_A          152 LGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATK  190 (335)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCCEecCCCchhEEEcCCCC-EEEeeccCcee
Confidence            7899999999999999999999999998 99999999986

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.62  E-value=8.9e-16  Score=111.07  Aligned_cols=86  Identities=24%  Similarity=0.443  Sum_probs=64.5

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------------cccCchhHHHHHHH-------------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------------ITNDTNSILRFLLL-------------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~~~~~~~~~~~~-------------------------   66 (127)
                      +.-++|++.+.||+|+||.||+|++..              .......|..++..                         
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            345789999999999999999999754              01112245555444                         


Q ss_pred             hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC----eEEEEeccccee
Q psy7471          67 LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS----LLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~----~~kl~dfg~a~~  112 (127)
                      |+ +++                         .||.|||+++|+||||||+||+++.++.    .+||+|||+++.
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred             eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence            22 222                         7899999999999999999999986542    299999999986

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.62  E-value=1.2e-15  Score=109.28  Aligned_cols=39  Identities=51%  Similarity=0.792  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus       131 ~al~~lH~~~ivH~Dlkp~Nil~~~~~~-~kl~Dfg~a~~  169 (308)
T 3g33_A          131 RGLDFLHANCIVHRDLKPENILVTSGGT-VKLADFGLARI  169 (308)
T ss_dssp             HHHHHHHHTTCCCSCCCTTTEEECTTSC-EEECSCSCTTT
T ss_pred             HHHHHHHHCCcccCCCCHHHEEEcCCCC-EEEeeCccccc
Confidence            7899999999999999999999999998 99999999875

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.61  E-value=7.1e-16  Score=112.32  Aligned_cols=84  Identities=25%  Similarity=0.406  Sum_probs=66.3

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------ccc---------------CchhHHHHHHH-----------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITN---------------DTNSILRFLLL-----------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~---------------~~~~~~~~~~~-----------------   66 (127)
                      .++|++.+.||+|+||.||+|+++.         +..               ....|..++..                 
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            4679999999999999999998765         000               11135555543                 


Q ss_pred             -------hhcch-h------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAG-D------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g-~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+..| +                        .|+.|||.++|+|+||||.||+++.++. +||+|||+++.
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~-~kL~Dfg~a~~  179 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFT-IKLIDFGSAAY  179 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCc-EEEeecccceE
Confidence                   23233 2                        7899999999999999999999999998 99999999986

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.61  E-value=3.4e-16  Score=112.27  Aligned_cols=39  Identities=38%  Similarity=0.512  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       145 ~~L~~LH~~~ivH~dlkp~NIl~~~~~~-~kl~dfg~~~~  183 (317)
T 2buj_A          145 RGLEAIHAKGYAHRDLKPTNILLGDEGQ-PVLMDLGSMNQ  183 (317)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEECTTSC-EEECCCSSCEE
T ss_pred             HHHHHHHhCCcccCCCCHHHEEEcCCCC-EEEEecCcchh
Confidence            7899999999999999999999999998 99999998765

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.61  E-value=1.2e-15  Score=107.09  Aligned_cols=87  Identities=23%  Similarity=0.482  Sum_probs=63.6

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc-------ccc-----------CchhHHHHHHH--------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS-------ITN-----------DTNSILRFLLL--------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~-----------~~~~~~~~~~~--------------------   66 (127)
                      ++..++|++.+.||+|+||.||+|++.+       ...           ....+..++..                    
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC   82 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CE
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceE
Confidence            4677899999999999999999998866       000           00123333332                    


Q ss_pred             ----hhcchh-----------------------HHHHHHHHCC---cEecCCCCCCEEEec--------CCCeEEEEecc
Q psy7471          67 ----LLCAGD-----------------------ACLTFLHRHG---VVYRDLKLDNILLDA--------GGSLLKLADFG  108 (127)
Q Consensus        67 ----~~~~g~-----------------------~al~~lH~~~---iih~dlk~~nil~~~--------~~~~~kl~dfg  108 (127)
                          |+.+++                       .|+.|||+++   ++|+||||+||+++.        .+. ++|+|||
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~-~kl~Dfg  161 (271)
T 3dtc_A           83 LVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKI-LKITDFG  161 (271)
T ss_dssp             EEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCC-EEECCCC
T ss_pred             EEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcc-eEEccCC
Confidence                333332                       7899999998   999999999999986        566 9999999


Q ss_pred             ccee
Q psy7471         109 RCAR  112 (127)
Q Consensus       109 ~a~~  112 (127)
                      +++.
T Consensus       162 ~~~~  165 (271)
T 3dtc_A          162 LARE  165 (271)
T ss_dssp             C---
T ss_pred             cccc
Confidence            9875

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.61  E-value=1.5e-15  Score=107.02  Aligned_cols=84  Identities=27%  Similarity=0.497  Sum_probs=64.4

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cc---cC----chhHHHHHHH------------------------h
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------IT---ND----TNSILRFLLL------------------------L   67 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~---~~----~~~~~~~~~~------------------------~   67 (127)
                      .++|++.+.||+|+||.||+|+++.         +.   ..    ...|..++..                        |
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            4579999999999999999999876         00   00    1133333333                        3


Q ss_pred             hcchh------------------------HHHHHHHHCCcEecCCCCCCEEE---ecCCCeEEEEeccccee
Q psy7471          68 LCAGD------------------------ACLTFLHRHGVVYRDLKLDNILL---DAGGSLLKLADFGRCAR  112 (127)
Q Consensus        68 ~~~g~------------------------~al~~lH~~~iih~dlk~~nil~---~~~~~~~kl~dfg~a~~  112 (127)
                      +.+++                        .|+.|||+++++|+||+|.||++   +.++. ++|+|||++..
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~-~~l~Dfg~~~~  158 (277)
T 3f3z_A           88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSP-LKLIDFGLAAR  158 (277)
T ss_dssp             CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCC-EEECCCTTCEE
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCc-EEEEeccccee
Confidence            33332                        78999999999999999999999   66677 99999999876

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.61  E-value=2.7e-15  Score=110.24  Aligned_cols=27  Identities=33%  Similarity=0.583  Sum_probs=25.0

Q ss_pred             HHHHHHHHC-CcEecCCCCCCEEEecCC
Q psy7471          73 ACLTFLHRH-GVVYRDLKLDNILLDAGG   99 (127)
Q Consensus        73 ~al~~lH~~-~iih~dlk~~nil~~~~~   99 (127)
                      .||.|||++ +|+||||||+|||++.++
T Consensus       157 ~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          157 QGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             HHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             HHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            789999998 999999999999998664

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.61  E-value=4.1e-16  Score=110.77  Aligned_cols=85  Identities=31%  Similarity=0.465  Sum_probs=63.9

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cc--c------CchhHHHHHHH-----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------IT--N------DTNSILRFLLL-----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--~------~~~~~~~~~~~-----------------------   66 (127)
                      ..++|++.+.||+|+||.||+|+++.         +.  .      ....|..++..                       
T Consensus        20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   99 (285)
T 3is5_A           20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM   99 (285)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence            34779999999999999999999865         00  0      01133334333                       


Q ss_pred             -hhcchh----------------------------HHHHHHHHCCcEecCCCCCCEEEe---cCCCeEEEEeccccee
Q psy7471          67 -LLCAGD----------------------------ACLTFLHRHGVVYRDLKLDNILLD---AGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~----------------------------~al~~lH~~~iih~dlk~~nil~~---~~~~~~kl~dfg~a~~  112 (127)
                       |+.+++                            .|+.|||+++++|+||||.||+++   ..+. ++|+|||+++.
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~-~kl~Dfg~a~~  176 (285)
T 3is5_A          100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSP-IKIIDFGLAEL  176 (285)
T ss_dssp             CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCC-EEECCCCCCCC
T ss_pred             EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCC-EEEEeeeccee
Confidence             333332                            789999999999999999999994   3456 99999999875

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.61  E-value=3e-17  Score=116.73  Aligned_cols=39  Identities=46%  Similarity=0.761  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       132 ~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~kl~dfg~~~~  170 (303)
T 2vwi_A          132 EGLEYLHKNGQIHRDVKAGNILLGEDGS-VQIADFGVSAF  170 (303)
T ss_dssp             HHHHHHHHTTCCCCCCSGGGEEECTTCC-EEECCCHHHHH
T ss_pred             HHHHHHHhCCCCCCCCChhhEEEcCCCC-EEEEeccchhe
Confidence            7899999999999999999999999998 99999998764

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.61  E-value=1.6e-15  Score=108.27  Aligned_cols=86  Identities=34%  Similarity=0.491  Sum_probs=65.9

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------cccC--------chhHHHHHHH----------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------ITND--------TNSILRFLLL----------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~--------~~~~~~~~~~----------------------   66 (127)
                      ...+.|++.+.||+|+||.||+|++..         +...        ...+..++..                      
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   98 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII   98 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence            345779999999999999999998864         1000        1133333332                      


Q ss_pred             --hhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --LLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                        |+.+++                       .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus        99 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~kl~Dfg~~~~  168 (303)
T 3a7i_A           99 MEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE-VKLADFGVAGQ  168 (303)
T ss_dssp             EECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCC-EEEeeccccee
Confidence              333322                       7899999999999999999999999998 99999999876

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.61  E-value=1.4e-15  Score=108.98  Aligned_cols=39  Identities=49%  Similarity=0.698  Sum_probs=36.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEe-cCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLD-AGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~-~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++ .++. ++|+|||+++.
T Consensus       150 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~-~kl~dfg~~~~  189 (312)
T 2iwi_A          150 AAIQHCHSRGVVHRDIKDENILIDLRRGC-AKLIDFGSGAL  189 (312)
T ss_dssp             HHHHHHHHHTEECCCCSGGGEEEETTTTE-EEECCCSSCEE
T ss_pred             HHHHHHHHCCeeecCCChhhEEEeCCCCe-EEEEEcchhhh
Confidence            789999999999999999999999 6676 99999999886

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.61  E-value=7.5e-16  Score=109.07  Aligned_cols=88  Identities=26%  Similarity=0.360  Sum_probs=65.6

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc----------------cccC-c------hhHHHHHHH---------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS----------------ITND-T------NSILRFLLL---------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~----------------~~~~-~------~~~~~~~~~---------------   66 (127)
                      ++..++|++.+.||+|+||.||+|+++.                .... .      ..|..++..               
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   83 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC   83 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence            4677899999999999999999998763                0000 0      122233322               


Q ss_pred             ---------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCe-------EEEE
Q psy7471          67 ---------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSL-------LKLA  105 (127)
Q Consensus        67 ---------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~-------~kl~  105 (127)
                               |+.+++                         .|+.|||+++++|+||||+||+++.++..       ++|+
T Consensus        84 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~  163 (289)
T 4fvq_A           84 GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS  163 (289)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred             CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeec
Confidence                     333333                         78999999999999999999999876642       8999


Q ss_pred             eccccee
Q psy7471         106 DFGRCAR  112 (127)
Q Consensus       106 dfg~a~~  112 (127)
                      |||++..
T Consensus       164 Dfg~~~~  170 (289)
T 4fvq_A          164 DPGISIT  170 (289)
T ss_dssp             CCCSCTT
T ss_pred             cCccccc
Confidence            9999865

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.61  E-value=1.3e-15  Score=110.15  Aligned_cols=39  Identities=51%  Similarity=0.925  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       152 ~~L~~LH~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~~~~  190 (321)
T 2c30_A          152 QALAYLHAQGVIHRDIKSDSILLTLDGR-VKLSDFGFCAQ  190 (321)
T ss_dssp             HHHHHHHHTTEECCCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCeecCCCCHHHEEECCCCc-EEEeeeeeeee
Confidence            6899999999999999999999999998 99999999876

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.61  E-value=1e-15  Score=108.35  Aligned_cols=90  Identities=23%  Similarity=0.390  Sum_probs=66.4

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc---------cc----c----------CchhHHHHHHH-------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT----N----------DTNSILRFLLL-------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~----~----------~~~~~~~~~~~-------------   66 (127)
                      ...+..++|++.+.||+|+||.||+|++..         +.    .          ....|..++..             
T Consensus        13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   92 (287)
T 4f0f_A           13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM   92 (287)
T ss_dssp             CCBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hhhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheee
Confidence            345677899999999999999999999864         10    0          00123333222             


Q ss_pred             ---------hhcchh-------------------------HHHHHHHHCC--cEecCCCCCCEEEecCCC----eEEEEe
Q psy7471          67 ---------LLCAGD-------------------------ACLTFLHRHG--VVYRDLKLDNILLDAGGS----LLKLAD  106 (127)
Q Consensus        67 ---------~~~~g~-------------------------~al~~lH~~~--iih~dlk~~nil~~~~~~----~~kl~d  106 (127)
                               |+.+++                         .|+.|||+++  ++|+||||+||+++..+.    .+||+|
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D  172 (287)
T 4f0f_A           93 HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD  172 (287)
T ss_dssp             TTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred             cCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence                     343333                         7899999999  999999999999975542    289999


Q ss_pred             ccccee
Q psy7471         107 FGRCAR  112 (127)
Q Consensus       107 fg~a~~  112 (127)
                      ||+++.
T Consensus       173 fg~~~~  178 (287)
T 4f0f_A          173 FGLSQQ  178 (287)
T ss_dssp             CTTCBC
T ss_pred             CCcccc
Confidence            999876

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.61  E-value=1.1e-15  Score=116.66  Aligned_cols=85  Identities=28%  Similarity=0.541  Sum_probs=64.1

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------ccc----------------C----chhHHHHHHH-----------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITN----------------D----TNSILRFLLL-----------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----------------~----~~~~~~~~~~-----------   66 (127)
                      ..++|++.+.||+|+||.||+|+++.         +..                .    ...|+.++..           
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            34789999999999999999999875         100                0    0134444433           


Q ss_pred             -------------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCC---CeEEEEe
Q psy7471          67 -------------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGG---SLLKLAD  106 (127)
Q Consensus        67 -------------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~---~~~kl~d  106 (127)
                                   |+.+|+                        .||.|||+++|+||||||+||+++..+   . +||+|
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~-~kl~D  192 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN-IKIVD  192 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSS-EEECC
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCcc-EEEEE
Confidence                         454543                        789999999999999999999998765   5 99999


Q ss_pred             ccccee
Q psy7471         107 FGRCAR  112 (127)
Q Consensus       107 fg~a~~  112 (127)
                      ||+++.
T Consensus       193 fg~a~~  198 (504)
T 3q5i_A          193 FGLSSF  198 (504)
T ss_dssp             CTTCEE
T ss_pred             CCCCEE
Confidence            999986

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.61  E-value=1.2e-15  Score=119.71  Aligned_cols=39  Identities=31%  Similarity=0.450  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.++. +||+|||+++.
T Consensus       480 ~~L~yLH~~~iiHrDLkp~NILl~~~~~-~kL~DFGla~~  518 (635)
T 4fl3_A          480 MGMKYLEESNFVHRDLAARNVLLVTQHY-AKISDFGLSKA  518 (635)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEEEETTE-EEECCTTHHHH
T ss_pred             HHHHHHHHCCEeCCCCChHhEEEeCCCC-EEEEEcCCccc
Confidence            7899999999999999999999999998 99999999875

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.61  E-value=1e-15  Score=116.54  Aligned_cols=83  Identities=34%  Similarity=0.576  Sum_probs=60.3

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------cc-----cC----chhHHHHHHH------------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------IT-----ND----TNSILRFLLL------------------------   66 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~-----~~----~~~~~~~~~~------------------------   66 (127)
                      +.|++.+.||+|+||.||+|+++.         +.     ..    ...|+.++..                        
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            469999999999999999999875         00     00    0123333332                        


Q ss_pred             hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          67 LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                      |+.+|+                        .||.|||+++|+||||||+||+++.   ... +||+|||+++.
T Consensus       117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~-~kl~DfG~a~~  188 (494)
T 3lij_A          117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDAL-IKIVDFGLSAV  188 (494)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCC-EEECCCTTCEE
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCc-EEEEECCCCeE
Confidence            444443                        7899999999999999999999975   344 99999999986

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.61  E-value=7.7e-17  Score=115.38  Aligned_cols=39  Identities=33%  Similarity=0.520  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       159 ~al~~lH~~~i~H~dikp~Nil~~~~~~-~kl~Dfg~~~~  197 (316)
T 2xir_A          159 KGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARD  197 (316)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECGGGC-EEECCCGGGSC
T ss_pred             HHHHHHHhCCcccccCccceEEECCCCC-EEECCCccccc
Confidence            6899999999999999999999999998 99999999876

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.61  E-value=2.4e-15  Score=108.02  Aligned_cols=89  Identities=24%  Similarity=0.334  Sum_probs=61.6

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc---------ccc----Cch------hHHHHHHH-----------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN----DTN------SILRFLLL-----------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----~~~------~~~~~~~~-----------------   66 (127)
                      ......++|++.+.||+|+||.||+|++..         +..    ...      .+..++..                 
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 2h34_A           28 REGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG  107 (309)
T ss_dssp             ------CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred             CCCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC
Confidence            345567899999999999999999999864         100    100      12222221                 


Q ss_pred             -------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+.+++                        .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~-~kl~Dfg~~~~  183 (309)
T 2h34_A          108 QLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDF-AYLVDFGIASA  183 (309)
T ss_dssp             EEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC-EEECSCCC---
T ss_pred             eEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCC-EEEecCccCcc
Confidence                   223322                        7899999999999999999999999998 99999999875

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.61  E-value=8.6e-16  Score=110.92  Aligned_cols=39  Identities=31%  Similarity=0.459  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus       153 ~aL~~LH~~~ivH~dlkp~NIl~~~~~~-~kL~Dfg~~~~  191 (327)
T 1fvr_A          153 RGMDYLSQKQFIHRDLAARNILVGENYV-AKIADFGLSRG  191 (327)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEECGGGC-EEECCTTCEES
T ss_pred             HHHHHHHhCCccCCCCccceEEEcCCCe-EEEcccCcCcc
Confidence            6899999999999999999999999888 99999999874

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.60  E-value=9.4e-16  Score=108.51  Aligned_cols=39  Identities=38%  Similarity=0.644  Sum_probs=32.8

Q ss_pred             HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||++ +++|+||||+||+++.++. ++|+|||+++.
T Consensus       120 ~~l~~lH~~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~  159 (290)
T 3fme_A          120 KALEHLHSKLSVIHRDVKPSNVLINALGQ-VKMCDFGISGY  159 (290)
T ss_dssp             HHHHHHHHHSCCCCCCCSGGGCEECTTCC-EEBCCC-----
T ss_pred             HHHHHHhhcCCeecCCCCHHHEEECCCCC-EEEeecCCccc
Confidence            789999998 9999999999999999998 99999999875

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.60  E-value=1e-15  Score=111.55  Aligned_cols=86  Identities=30%  Similarity=0.474  Sum_probs=62.0

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------ccc------------CchhHHHHHHH------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN------------DTNSILRFLLL------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~------------~~~~~~~~~~~------------------   66 (127)
                      ...++|++.+.||+|+||.||+|+++.         +..            ....|..++..                  
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            346789999999999999999998864         100            01134444443                  


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            |+.++.                        .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus        87 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~-~kl~Dfg~a~~  161 (346)
T 1ua2_A           87 ISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV-LKLADFGLAKS  161 (346)
T ss_dssp             CEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC-EEECCCGGGST
T ss_pred             eEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCC-EEEEeccccee
Confidence                  121110                        7899999999999999999999999998 99999999875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.60  E-value=1e-15  Score=120.59  Aligned_cols=88  Identities=26%  Similarity=0.413  Sum_probs=67.1

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc------------ccc-Cc-------hhHHHHHHH-----------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS------------ITN-DT-------NSILRFLLL-----------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~~-~~-------~~~~~~~~~-----------------   66 (127)
                      +.+..++|++.+.||+|+||.||+|++..            ... ..       ..|..++..                 
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~  464 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP  464 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCc
Confidence            34556789999999999999999998853            000 00       122233322                 


Q ss_pred             ------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            |+.+|+                         .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus       465 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~-vkL~DFG~a~~  540 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRY  540 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE-EEECCCCCCCS
T ss_pred             eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCC-EEEEecCCCee
Confidence                  344333                         7899999999999999999999999988 99999999986

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.60  E-value=2.8e-15  Score=105.54  Aligned_cols=39  Identities=28%  Similarity=0.502  Sum_probs=34.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecC-------------------CCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAG-------------------GSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~-------------------~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++++|+||||+||+++.+                   .. ++|+|||++..
T Consensus       126 ~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~-~kl~Dfg~~~~  183 (289)
T 1x8b_A          126 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVM-FKIGDLGHVTR  183 (289)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEEC--------------------CCC-EEECCCTTCEE
T ss_pred             HHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceE-EEEcccccccc
Confidence            78999999999999999999999843                   35 89999999887

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.60  E-value=8.1e-16  Score=111.52  Aligned_cols=39  Identities=36%  Similarity=0.619  Sum_probs=34.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC---CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG---SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~---~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+|+||||.||+++..+   . +||+|||+++.
T Consensus       117 ~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~-~kl~Dfg~a~~  158 (325)
T 3kn6_A          117 SAVSHMHDVGVVHRDLKPENLLFTDENDNLE-IKIIDFGFARL  158 (325)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEEEC----CE-EEECCCTTCEE
T ss_pred             HHHHHHHHCCCeecCCCHHHEEEecCCCccc-EEEecccccee
Confidence            789999999999999999999998665   5 99999999986

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.60  E-value=4e-15  Score=106.29  Aligned_cols=84  Identities=14%  Similarity=0.057  Sum_probs=62.2

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------ccc----Cch------hHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN----DTN------SILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----~~~------~~~~~~~~--------------------   66 (127)
                      +..++|++.+.||+|+||.||+|++..         +..    ..+      .+..++..                    
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  107 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL  107 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence            445789999999999999999999874         100    011      12222211                    


Q ss_pred             ----hhcchh----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccc
Q psy7471          67 ----LLCAGD----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC  110 (127)
Q Consensus        67 ----~~~~g~----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a  110 (127)
                          |+.+++                      .|+.|||+++|+|+||||+||+++.++. ++|++++..
T Consensus       108 lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~-~kl~~~~~~  176 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGD-VVLAYPATM  176 (286)
T ss_dssp             EEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSC-EEECSCCCC
T ss_pred             EEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCC-EEEEecccc
Confidence                333332                      7899999999999999999999999998 999876653

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.60  E-value=1.3e-15  Score=110.99  Aligned_cols=39  Identities=33%  Similarity=0.520  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+|+||||.||+++.++. ++|+|||+++.
T Consensus       204 ~aL~~LH~~~ivH~Dikp~NIll~~~~~-~kl~Dfg~a~~  242 (359)
T 3vhe_A          204 KGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARD  242 (359)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECGGGC-EEECCCGGGSC
T ss_pred             HHHHHHHHCCcccCCCChhhEEEcCCCc-EEEEeccceee
Confidence            6899999999999999999999999998 99999999975

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.60  E-value=2.5e-15  Score=108.35  Aligned_cols=85  Identities=26%  Similarity=0.364  Sum_probs=66.1

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------ccc-------------CchhHHHHHHH------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITN-------------DTNSILRFLLL------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~-------------~~~~~~~~~~~------------------   66 (127)
                      ..+.|++.+.||+|+||.||+|+++.         +..             ....|..++..                  
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   89 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD   89 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            34679999999999999999999875         000             01234444443                  


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCC----CeEEEEeccccee
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGG----SLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~----~~~kl~dfg~a~~  112 (127)
                            |+.+++                        .|+.|||+++++|+||+|+||+++.++    . ++|+|||+++.
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~-~kl~Dfg~~~~  168 (321)
T 2a2a_A           90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHE  168 (321)
T ss_dssp             EEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCC-EEECCCTTCEE
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCC-EEEccCcccee
Confidence                  333333                        789999999999999999999999877    6 99999999986

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.60  E-value=1.3e-15  Score=108.26  Aligned_cols=90  Identities=24%  Similarity=0.344  Sum_probs=66.2

Q ss_pred             CCCcccCCCeEEEE-EeceeCCceEEEEEEcc-----------ccc---Cc------hhHHHHHHH--------------
Q psy7471          22 GDRKVGLEDFHFIK-VLGKGSFGKELFGHYRS-----------ITN---DT------NSILRFLLL--------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~-~lg~G~fg~V~~~~~~~-----------~~~---~~------~~~~~~~~~--------------   66 (127)
                      ....+...+|++.+ .||+|+||.||+|.+..           ...   ..      ..+..++..              
T Consensus         9 ~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   88 (291)
T 1xbb_A            9 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE   88 (291)
T ss_dssp             --CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC
Confidence            34556778899998 99999999999996642           100   00      122333322              


Q ss_pred             ---------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                               |+.+++                        .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~-~kl~Dfg~~~~  166 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY-AKISDFGLSKA  166 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE-EEECCCTTCEE
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCc-EEEccCCccee
Confidence                     233222                        7899999999999999999999999988 99999999886

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.60  E-value=7.4e-16  Score=111.50  Aligned_cols=39  Identities=33%  Similarity=0.479  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. +||+|||+++.
T Consensus       185 ~~l~~LH~~~ivH~Dlkp~NIl~~~~~~-~kl~Dfg~~~~  223 (343)
T 1luf_A          185 AGMAYLSERKFVHRDLATRNCLVGENMV-VKIADFGLSRN  223 (343)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECGGGC-EEECCCSCHHH
T ss_pred             HHHHHHHhCCeecCCCCcceEEECCCCe-EEEeecCCCcc
Confidence            6799999999999999999999999998 99999999875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.60  E-value=1.6e-15  Score=108.41  Aligned_cols=39  Identities=36%  Similarity=0.549  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       156 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~  194 (313)
T 1t46_A          156 KGMAFLASKNCIHRDLAARNILLTHGRI-TKICDFGLARD  194 (313)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEEETTTE-EEECCCGGGSC
T ss_pred             HHHHHHHHCCeecCCCccceEEEcCCCC-EEEcccccccc
Confidence            6899999999999999999999999888 99999999886

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.60  E-value=1.1e-15  Score=110.03  Aligned_cols=39  Identities=38%  Similarity=0.784  Sum_probs=37.2

Q ss_pred             HHHHHHHHCC--cEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHG--VVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~--iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++  ++|+||||.||+++.++. +||+|||+++.
T Consensus       147 ~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~-~kl~Dfg~~~~  187 (337)
T 3ll6_A          147 RAVQHMHRQKPPIIHRDLKVENLLLSNQGT-IKLCDFGSATT  187 (337)
T ss_dssp             HHHHHHHTSSSCCBCCCCCGGGCEECTTSC-EEBCCCTTCBC
T ss_pred             HHHHHHHhCCCCEEEccCCcccEEECCCCC-EEEecCcccee
Confidence            7899999999  999999999999999998 99999999876

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.60  E-value=4.2e-15  Score=105.52  Aligned_cols=87  Identities=29%  Similarity=0.390  Sum_probs=65.0

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc---------c-----ccCchhHHHHHHH------------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS---------I-----TNDTNSILRFLLL------------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~-----~~~~~~~~~~~~~------------------------   66 (127)
                      .+..++|++.+.||+|+||.||+|++..         +     ......+..++..                        
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A            6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            4566789999999999999999999754         0     0111234444433                        


Q ss_pred             -hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC----eEEEEeccccee
Q psy7471          67 -LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS----LLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~----~~kl~dfg~a~~  112 (127)
                       |+ +++                         .|+.|||+++++|+||||+||+++.++.    .++|+|||+++.
T Consensus        86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence             22 222                         7899999999999999999999975432    399999999986

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.60  E-value=4.7e-16  Score=117.93  Aligned_cols=87  Identities=28%  Similarity=0.543  Sum_probs=65.5

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc---------cc----c-C-----chhHHHHHHH-------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT----N-D-----TNSILRFLLL-------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~----~-~-----~~~~~~~~~~-------------------   66 (127)
                      ....++|++.++||+|+||.||+|+++.         +.    . .     ...|..++..                   
T Consensus        22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  101 (484)
T 3nyv_A           22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF  101 (484)
T ss_dssp             CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            3455789999999999999999999874         10    0 0     0133333332                   


Q ss_pred             -----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEe---cCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLD---AGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~---~~~~~~kl~dfg~a~~  112 (127)
                           |+.+|+                        .|+.|||+++|+||||||+||+++   .++. +||+|||+++.
T Consensus       102 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~-~kl~Dfg~a~~  178 (484)
T 3nyv_A          102 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAN-IRIIDFGLSTH  178 (484)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCC-EEECCTTHHHH
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCc-EEEEeeeeeEE
Confidence                 344443                        789999999999999999999994   4566 99999999875

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.60  E-value=3.9e-16  Score=113.77  Aligned_cols=39  Identities=38%  Similarity=0.675  Sum_probs=36.0

Q ss_pred             HHHHHHH--HCCcEecCCCCCCEEEec-CCCeEEEEeccccee
Q psy7471          73 ACLTFLH--RHGVVYRDLKLDNILLDA-GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH--~~~iih~dlk~~nil~~~-~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||  +++|+|+||||+||+++. ++. +||+|||+++.
T Consensus       140 ~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~-~kl~Dfg~a~~  181 (360)
T 3e3p_A          140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGT-LKLCDFGSAKK  181 (360)
T ss_dssp             HHHHHHTSTTTCCBCSCCCGGGEEEETTTTE-EEECCCTTCBC
T ss_pred             HHHHHHhCCCCCeecCcCCHHHEEEeCCCCc-EEEeeCCCcee
Confidence            6899999  999999999999999997 666 99999999986

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.60  E-value=2.7e-16  Score=123.98  Aligned_cols=85  Identities=25%  Similarity=0.449  Sum_probs=64.5

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc----------cccC-c-h------hHH--------------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS----------ITND-T-N------SIL--------------------------   61 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~----------~~~~-~-~------~~~--------------------------   61 (127)
                      +..++|++.+.||+|+||.||+|++..          +... . .      .|.                          
T Consensus        77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~  156 (681)
T 2pzi_A           77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD  156 (681)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred             EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence            344889999999999999999999863          1000 0 1      111                          


Q ss_pred             ---HHHHHhhcchh----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          62 ---RFLLLLLCAGD----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        62 ---~~~~~~~~~g~----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                         +++++|+.+++                      .||.|||+++|+||||||.||+++.+ . +||+|||+++.
T Consensus       157 ~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~-~kl~DFG~a~~  230 (681)
T 2pzi_A          157 PVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-Q-LKLIDLGAVSR  230 (681)
T ss_dssp             EEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-C-EEECCCTTCEE
T ss_pred             ceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-c-EEEEecccchh
Confidence               22233444443                      78999999999999999999999875 6 99999999987

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.60  E-value=3.3e-15  Score=111.64  Aligned_cols=39  Identities=33%  Similarity=0.445  Sum_probs=37.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.++. +||+|||+++.
T Consensus       222 ~aL~~LH~~~iiHrDiKp~NILl~~~~~-~kL~DFG~a~~  260 (413)
T 3dzo_A          222 RLLASLHHYGLVHTYLRPVDIVLDQRGG-VFLTGFEHLVR  260 (413)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEECTTCC-EEECCGGGCEE
T ss_pred             HHHHHHHhCCcccCCcccceEEEecCCe-EEEEeccceee
Confidence            7899999999999999999999999999 99999999886

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.60  E-value=1.7e-16  Score=111.10  Aligned_cols=89  Identities=13%  Similarity=0.225  Sum_probs=67.1

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc-------ccc---CchhHHHHHHH--------------------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------ITN---DTNSILRFLLL--------------------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~---~~~~~~~~~~~--------------------------   66 (127)
                      .+.+..++|++.+.||+|+||.||+|++.+       ...   .......+..+                          
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   83 (271)
T 3kmu_A            4 HSGIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH   83 (271)
T ss_dssp             CCCCCGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSS
T ss_pred             cCCCCHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCC
Confidence            356788999999999999999999999876       000   01111112222                          


Q ss_pred             ------hhcchh--------------------------HHHHHHHHCC--cEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD--------------------------ACLTFLHRHG--VVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~--------------------------~al~~lH~~~--iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            |+.+|+                          .|+.|||+++  ++|+||||+||+++.++. ++++||+++..
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~-~~l~~~~~~~~  162 (271)
T 3kmu_A           84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMT-ARISMADVKFS  162 (271)
T ss_dssp             CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSC-EEEEGGGSCCT
T ss_pred             eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcc-eeEEeccceee
Confidence                  333332                          7899999999  999999999999999988 99999888655

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.60  E-value=3.7e-15  Score=106.49  Aligned_cols=39  Identities=33%  Similarity=0.561  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.++. ++|+|||+++.
T Consensus       161 ~~l~~lH~~~ivH~dikp~NIli~~~~~-~kl~Dfg~~~~  199 (314)
T 2ivs_A          161 QGMQYLAEMKLVHRDLAARNILVAEGRK-MKISDFGLSRD  199 (314)
T ss_dssp             HHHHHHHHTTEECCCCSGGGEEEETTTE-EEECCCTTCEE
T ss_pred             HHHHHHHHCCCcccccchheEEEcCCCC-EEEcccccccc
Confidence            6899999999999999999999999888 99999999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.60  E-value=1.7e-15  Score=110.66  Aligned_cols=87  Identities=28%  Similarity=0.396  Sum_probs=65.7

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc---------ccc--CchhHHHHHHH---------------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN--DTNSILRFLLL---------------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~--~~~~~~~~~~~---------------------------   66 (127)
                      .+..++|++.+.||+|+||.||+|+++.         +..  .......+..+                           
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  108 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI  108 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence            4567889999999999999999999974         110  11111111111                           


Q ss_pred             ---hhcchh------------------------HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---LLCAGD------------------------ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~------------------------~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                         |+.+++                        .|+.|||+. +++|+||||.||+++.++. ++|+|||+++.
T Consensus       109 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~  181 (360)
T 3eqc_A          109 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE-IKLCDFGVSGQ  181 (360)
T ss_dssp             EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCC-EEECCCCCCHH
T ss_pred             EEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCC-EEEEECCCCcc
Confidence               343333                        789999996 9999999999999999998 99999999864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.59  E-value=1.6e-15  Score=107.01  Aligned_cols=39  Identities=41%  Similarity=0.769  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       123 ~~l~~lH~~~i~H~dl~p~Nili~~~~~-~kl~dfg~~~~  161 (278)
T 3cok_A          123 TGMLYLHSHGILHRDLTLSNLLLTRNMN-IKIADFGLATQ  161 (278)
T ss_dssp             HHHHHHHHTTEECSSCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCeecCCCCHHHEEEcCCCC-EEEEeecceee
Confidence            7899999999999999999999999998 99999999886

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.59  E-value=3.2e-15  Score=107.38  Aligned_cols=88  Identities=31%  Similarity=0.523  Sum_probs=64.4

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc------cccCc------hhHHHHHHH----------------------hhcc
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS------ITNDT------NSILRFLLL----------------------LLCA   70 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~~~~------~~~~~~~~~----------------------~~~~   70 (127)
                      .+..++|++.+.||+|+||.||+|++.+      .....      ..|..++..                      |+.+
T Consensus         4 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~   83 (307)
T 2eva_A            4 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEG   83 (307)
T ss_dssp             BCCGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTT
T ss_pred             cCCHhHeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCC
Confidence            3567889999999999999999999876      11111      122333322                      3434


Q ss_pred             hh---------------------------HHHHHHHH---CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          71 GD---------------------------ACLTFLHR---HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        71 g~---------------------------~al~~lH~---~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ++                           .|+.|||+   ++++|+||||+||+++.++..+||+|||++..
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~  155 (307)
T 2eva_A           84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD  155 (307)
T ss_dssp             CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred             CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence            33                           68999999   89999999999999998876479999999875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.59  E-value=2.2e-16  Score=114.11  Aligned_cols=39  Identities=28%  Similarity=0.475  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       156 ~aL~~LH~~~ivH~dikp~NIli~~~~~-~kL~Dfg~~~~  194 (326)
T 2w1i_A          156 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKV  194 (326)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEEEETTE-EEECCCTTCEE
T ss_pred             HHHHHHHhCCEeccCCCcceEEEcCCCc-EEEecCcchhh
Confidence            7899999999999999999999999988 99999999986

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.59  E-value=4.5e-15  Score=105.51  Aligned_cols=85  Identities=26%  Similarity=0.351  Sum_probs=65.3

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cc----cCch------hHHHHHHH---------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------IT----NDTN------SILRFLLL---------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~----~~~~------~~~~~~~~---------------------   66 (127)
                      ..++|++.+.||+|+||.||+|+++.         ..    ....      .|..++..                     
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   92 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV   92 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence            45679999999999999999999875         00    0111      22223322                     


Q ss_pred             ---hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                         |+.+++                        .|+.|||+++++|+||+|+||+++.++. ++|+|||+++.
T Consensus        93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~kl~dfg~~~~  164 (294)
T 2rku_A           93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATK  164 (294)
T ss_dssp             EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCC-EEEEeccCcee
Confidence               333222                        7899999999999999999999999998 99999999886

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.59  E-value=2.3e-17  Score=118.90  Aligned_cols=89  Identities=28%  Similarity=0.522  Sum_probs=66.7

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc--------ccc--------CchhHHHHHHH--------------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITN--------DTNSILRFLLL--------------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~--------~~~~~~~~~~~--------------------   66 (127)
                      ......++|++.+.||+|+||.||+|++..        +..        ....+..++..                    
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  103 (326)
T 3uim_A           24 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL  103 (326)
T ss_dssp             HHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCE
T ss_pred             HHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceE
Confidence            344566889999999999999999998654        000        00122222221                    


Q ss_pred             ----hhcchh----------------------------HHHHHHHHC---CcEecCCCCCCEEEecCCCeEEEEecccce
Q psy7471          67 ----LLCAGD----------------------------ACLTFLHRH---GVVYRDLKLDNILLDAGGSLLKLADFGRCA  111 (127)
Q Consensus        67 ----~~~~g~----------------------------~al~~lH~~---~iih~dlk~~nil~~~~~~~~kl~dfg~a~  111 (127)
                          |+.+|+                            .|+.|||++   +++|+||||.||+++.++. ++|+|||+++
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~-~kl~Dfg~~~  182 (326)
T 3uim_A          104 LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE-AVVGDFGLAK  182 (326)
T ss_dssp             EEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCC-EEECCCSSCE
T ss_pred             EEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCC-EEeccCcccc
Confidence                333332                            689999999   9999999999999999998 9999999998


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      .
T Consensus       183 ~  183 (326)
T 3uim_A          183 L  183 (326)
T ss_dssp             E
T ss_pred             c
Confidence            6

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.59  E-value=1.5e-15  Score=106.90  Aligned_cols=89  Identities=35%  Similarity=0.557  Sum_probs=67.3

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc------cc---c----------CchhHHHHHHH-----------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS------IT---N----------DTNSILRFLLL-----------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~---~----------~~~~~~~~~~~-----------------   66 (127)
                      ...+..++|++.+.||+|+||.||+|+++.      +.   .          ....+..++..                 
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   84 (276)
T 2h6d_A            5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT   84 (276)
T ss_dssp             --CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             cCcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            345678899999999999999999999874      00   0          00123333322                 


Q ss_pred             -------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+.+++                        .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~~l~dfg~~~~  160 (276)
T 2h6d_A           85 DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMN-AKIADFGLSNM  160 (276)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSC-EEECCCCGGGC
T ss_pred             eEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCC-EEEeecccccc
Confidence                   333322                        7899999999999999999999999998 99999999876

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.59  E-value=3.1e-15  Score=110.12  Aligned_cols=39  Identities=36%  Similarity=0.623  Sum_probs=35.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+|+||||+||+++.++. +||+|||+++.
T Consensus       138 ~al~~lH~~~ivH~Dlkp~NIl~~~~~~-~kl~Dfg~a~~  176 (371)
T 2xrw_A          138 CGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFGLART  176 (371)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECTTSC-EEECCCCC---
T ss_pred             HHHHHHHHCCeecccCCHHHEEEcCCCC-EEEEEeecccc
Confidence            7899999999999999999999999998 99999999986

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.59  E-value=1.5e-15  Score=110.53  Aligned_cols=38  Identities=42%  Similarity=0.685  Sum_probs=35.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++ ++. +||+|||+++.
T Consensus       119 ~al~~lH~~~iiHrDikp~NIll~-~~~-~kl~DFG~a~~  156 (343)
T 3dbq_A          119 EAVHTIHQHGIVHSDLKPANFLIV-DGM-LKLIDFGIANQ  156 (343)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEEE-TTE-EEECCCSSSCC
T ss_pred             HHHHHHHhCCeecCCCCcceEEEE-CCc-EEEeecccccc
Confidence            789999999999999999999997 566 99999999976

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.59  E-value=1.6e-15  Score=109.41  Aligned_cols=39  Identities=41%  Similarity=0.687  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+|+||||+||+++.++. +||+|||+++.
T Consensus       119 ~aL~~lH~~~ivH~Dlkp~NIl~~~~~~-~kl~Dfg~~~~  157 (317)
T 2pmi_A          119 QGLAFCHENKILHRDLKPQNLLINKRGQ-LKLGDFGLARA  157 (317)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEECTTCC-EEECCCSSCEE
T ss_pred             HHHHHHHHCCeeeCCCChHHeEEcCCCC-EEECcCcccee
Confidence            6899999999999999999999999998 99999999986

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.59  E-value=3.5e-15  Score=109.81  Aligned_cols=39  Identities=44%  Similarity=0.746  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       211 ~~L~~LH~~gi~H~Dlkp~NIl~~~~~~-ikl~DfG~~~~  249 (365)
T 2y7j_A          211 EAVSFLHANNIVHRDLKPENILLDDNMQ-IRLSDFGFSCH  249 (365)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHhCCeecCCCCHHHEEECCCCC-EEEEecCcccc
Confidence            7899999999999999999999999998 99999999886

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.59  E-value=2.4e-15  Score=110.98  Aligned_cols=39  Identities=31%  Similarity=0.568  Sum_probs=32.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||.||+++.++. +||+|||+++.
T Consensus       143 ~aL~~LH~~givH~Dlkp~NIll~~~~~-~kL~DFG~a~~  181 (367)
T 2fst_X          143 RGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARH  181 (367)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECTTCC-EEECC------
T ss_pred             HHHHHHHHCCeeeCCCCHhhEEECCCCC-EEEeecccccc
Confidence            7899999999999999999999999998 99999999986

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.59  E-value=2.5e-15  Score=111.08  Aligned_cols=39  Identities=31%  Similarity=0.460  Sum_probs=35.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEe--cCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~--~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+|+||||.||++.  .... +||+|||+++.
T Consensus       198 ~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~-~kl~DFG~a~~  238 (373)
T 2x4f_A          198 EGIRHMHQMYILHLDLKPENILCVNRDAKQ-IKIIDFGLARR  238 (373)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEEEETTTTE-EEECCCSSCEE
T ss_pred             HHHHHHHHCCcccccCCHHHEEEecCCCCc-EEEEeCCCcee
Confidence            789999999999999999999985  3455 99999999987

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.59  E-value=4.7e-15  Score=104.70  Aligned_cols=86  Identities=28%  Similarity=0.448  Sum_probs=64.0

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cc--c-C------chhHHHHHHH----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------IT--N-D------TNSILRFLLL----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--~-~------~~~~~~~~~~----------------------   66 (127)
                      ..++|++.+.||+|+||.||+|.++.         +.  . .      ...|..++..                      
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            35789999999999999999998875         00  0 0      0123333333                      


Q ss_pred             --hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC--eEEEEeccccee
Q psy7471          67 --LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS--LLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~--~~kl~dfg~a~~  112 (127)
                        |+.+++                        .|+.|||+++++|+||+|.||+++.++.  .++|+|||++..
T Consensus        84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~  157 (284)
T 3kk8_A           84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE  157 (284)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence              333332                        7899999999999999999999975432  399999999876

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.59  E-value=1.6e-15  Score=108.67  Aligned_cols=39  Identities=26%  Similarity=0.425  Sum_probs=35.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       158 ~aL~~LH~~~ivH~dikp~NIli~~~~~-~kl~Dfg~~~~  196 (313)
T 3brb_A          158 LGMEYLSNRNFLHRDLAARNCMLRDDMT-VCVADFGLSKK  196 (313)
T ss_dssp             HHHHHHHTTTCCCCCCSGGGEEECTTSC-EEECSCSCC--
T ss_pred             HHHHHHHhCCcccCCCCcceEEEcCCCc-EEEeecCccee
Confidence            6899999999999999999999999998 99999999876

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.58  E-value=4.8e-15  Score=106.63  Aligned_cols=39  Identities=44%  Similarity=0.691  Sum_probs=36.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||.++++|+||+|.||+++.++. ++|+|||++..
T Consensus       140 ~~l~~lH~~~ivH~dlkp~NIl~~~~~~-~kl~Dfg~~~~  178 (326)
T 2x7f_A          140 RGLSHLHQHKVIHRDIKGQNVLLTENAE-VKLVDFGVSAQ  178 (326)
T ss_dssp             HHHHHHHHTTCCCCCCSGGGEEECTTCC-EEECCCTTTC-
T ss_pred             HHHHHHHHCCccccCCcHHHEEEcCCCC-EEEeeCcCcee
Confidence            7899999999999999999999999998 99999999875

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.58  E-value=2e-15  Score=106.11  Aligned_cols=84  Identities=29%  Similarity=0.574  Sum_probs=64.8

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------c--ccCc------hhHHHHHHH------------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------I--TNDT------NSILRFLLL------------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~--~~~~------~~~~~~~~~------------------------   66 (127)
                      .++|++.+.||+|+||.||+|+++.         +  ....      ..+..++..                        
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            4689999999999999999999874         1  0000      123333332                        


Q ss_pred             hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+++                        .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~kl~dfg~~~~  154 (276)
T 2yex_A           86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN-LKISDFGLATV  154 (276)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCC-EEEeeCCCccc
Confidence            333322                        7899999999999999999999999998 99999999875

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.58  E-value=2.2e-15  Score=108.03  Aligned_cols=91  Identities=23%  Similarity=0.445  Sum_probs=66.0

Q ss_pred             CCCCCcccCCCeEEEEEeceeCCceEEEEEEcc------c---------ccCchhHHH----------------------
Q psy7471          20 SGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS------I---------TNDTNSILR----------------------   62 (127)
Q Consensus        20 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~---------~~~~~~~~~----------------------   62 (127)
                      ....+.+..++|++.+.||+|+||.||+|+++.      +         ......+..                      
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  103 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH  103 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence            345677889999999999999999999998865      0         000011111                      


Q ss_pred             --HHHHhhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          63 --FLLLLLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        63 --~~~~~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                        ++++|+.+++                         .|+.|||+++++|+||+|+||+++ ++. ++|+|||+++.
T Consensus       104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~-~~l~Dfg~~~~  178 (319)
T 2y4i_B          104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGK-VVITDFGLFSI  178 (319)
T ss_dssp             EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---C-CEECCCSCCC-
T ss_pred             eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCC-EEEeecCCccc
Confidence              1222333332                         789999999999999999999998 566 99999998664

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.58  E-value=9.9e-15  Score=107.02  Aligned_cols=39  Identities=38%  Similarity=0.615  Sum_probs=37.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+|+||||+||+++.++. ++|+|||+++.
T Consensus       139 ~aL~~LH~~~ivH~Dikp~NIl~~~~~~-~kl~Dfg~a~~  177 (364)
T 3qyz_A          139 RGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARV  177 (364)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCeecCCCChHhEEECCCCC-EEEEeCcceEe
Confidence            7899999999999999999999999999 99999999986

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.58  E-value=3.2e-15  Score=110.18  Aligned_cols=39  Identities=33%  Similarity=0.445  Sum_probs=37.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.++. +||+|||+++.
T Consensus       217 ~aL~~LH~~~ivHrDikp~NIll~~~~~-~kL~DFG~a~~  255 (377)
T 3byv_A          217 RLLASLHHYGLVHTYLRPVDIVLDQRGG-VFLTGFEHLVR  255 (377)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEECTTCC-EEECCGGGCEE
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEEechhhee
Confidence            7899999999999999999999999998 99999999986

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.58  E-value=3.7e-15  Score=107.88  Aligned_cols=39  Identities=38%  Similarity=0.654  Sum_probs=36.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.   .+. +||+|||+++.
T Consensus       142 ~~L~~LH~~givH~Dikp~NIl~~~~~~~~~-~kL~Dfg~a~~  183 (327)
T 3lm5_A          142 EGVYYLHQNNIVHLDLKPQNILLSSIYPLGD-IKIVDFGMSRK  183 (327)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEESCBTTBCC-EEECCGGGCEE
T ss_pred             HHHHHHHHCCeecCcCChHHEEEecCCCCCc-EEEeeCccccc
Confidence            7899999999999999999999987   567 99999999986

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.58  E-value=3e-15  Score=106.23  Aligned_cols=89  Identities=24%  Similarity=0.359  Sum_probs=66.6

Q ss_pred             CCcccCCCeEEEE-EeceeCCceEEEEEEcc-----------ccc--Cc------hhHHHHHHH----------------
Q psy7471          23 DRKVGLEDFHFIK-VLGKGSFGKELFGHYRS-----------ITN--DT------NSILRFLLL----------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~-~lg~G~fg~V~~~~~~~-----------~~~--~~------~~~~~~~~~----------------   66 (127)
                      .+.+..++|.+.. .||+|+||.||+|.++.           ...  ..      ..|..++..                
T Consensus         3 ~~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   82 (287)
T 1u59_A            3 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE   82 (287)
T ss_dssp             CCBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             cccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCC
Confidence            3456678898887 99999999999998642           111  11      123333332                


Q ss_pred             -------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+.+++                         .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~-~kl~Dfg~~~~  159 (287)
T 1u59_A           83 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY-AKISDFGLSKA  159 (287)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTE-EEECCCTTCEE
T ss_pred             CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCC-EEECcccceee
Confidence                   222222                         7899999999999999999999999888 99999999886

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.58  E-value=1.1e-14  Score=104.66  Aligned_cols=39  Identities=33%  Similarity=0.564  Sum_probs=36.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec-------------------CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA-------------------GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~-------------------~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++++|+||||+||+++.                   +.. ++|+|||+++.
T Consensus       129 ~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~-~kl~Dfg~~~~  186 (339)
T 1z57_A          129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD-IKVVDFGSATY  186 (339)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCC-EEECCCSSCEE
T ss_pred             HHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCC-ceEeeCccccc
Confidence            7899999999999999999999987                   456 99999999986

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.58  E-value=3.2e-15  Score=108.94  Aligned_cols=39  Identities=33%  Similarity=0.526  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC--CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG--SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~--~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+|+||||+||+++.++  . +||+|||+++.
T Consensus       162 ~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~-~kL~Dfg~a~~  202 (345)
T 2v62_A          162 DVLEYIHENEYVHGDIKAANLLLGYKNPDQ-VYLADYGLSYR  202 (345)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEEESSSTTS-EEECCCTTCEE
T ss_pred             HHHHHHHhCCeeCCCcCHHHEEEccCCCCc-EEEEeCCCcee
Confidence            789999999999999999999999877  7 99999999976

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.58  E-value=2.1e-16  Score=112.69  Aligned_cols=39  Identities=38%  Similarity=0.744  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||++..
T Consensus       120 ~al~~LH~~~i~H~dlkp~NIl~~~~~~-~kl~dfg~~~~  158 (305)
T 2wtk_C          120 DGLEYLHSQGIVHKDIKPGNLLLTTGGT-LKISALGVAEA  158 (305)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCeeecCCCcccEEEcCCCc-EEeeccccccc
Confidence            7899999999999999999999999998 99999999876

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.57  E-value=5.8e-15  Score=108.68  Aligned_cols=39  Identities=38%  Similarity=0.627  Sum_probs=36.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+|+||||+||+++.++. +||+|||+++.
T Consensus       155 ~aL~~LH~~~ivH~Dikp~NIll~~~~~-~kL~Dfg~a~~  193 (371)
T 4exu_A          155 KGLKYIHSAGVVHRDLKPGNLAVNEDCE-LKILDFGLARH  193 (371)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECTTCC-EEECSTTCC--
T ss_pred             HHHHHHHHCCCcCCCcCHHHeEECCCCC-EEEEecCcccc
Confidence            7899999999999999999999999999 99999999976

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.57  E-value=8.3e-15  Score=104.79  Aligned_cols=38  Identities=21%  Similarity=0.325  Sum_probs=36.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||.||+++ ++. ++|+|||+|+.
T Consensus       204 ~~l~~lH~~giiHrDlkp~NILl~-~~~-vkl~DFG~a~~  241 (282)
T 1zar_A          204 EEVAKFYHRGIVHGDLSQYNVLVS-EEG-IWIIDFPQSVE  241 (282)
T ss_dssp             HHHHHHHHTTEECSCCSTTSEEEE-TTE-EEECCCTTCEE
T ss_pred             HHHHHHHHCCCEeCCCCHHHEEEE-CCc-EEEEECCCCeE
Confidence            789999999999999999999999 777 99999999986

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.57  E-value=1.4e-14  Score=105.18  Aligned_cols=39  Identities=36%  Similarity=0.589  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       123 ~~L~~LH~~~ivH~Dlkp~Nil~~~~~~-~kl~Dfg~a~~  161 (353)
T 2b9h_A          123 RAVKVLHGSNVIHRDLKPSNLLINSNCD-LKVCDFGLARI  161 (353)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCeecCCCCHHHeEEcCCCc-EEEEecccccc
Confidence            7899999999999999999999999998 99999999986

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.57  E-value=2.5e-15  Score=107.01  Aligned_cols=86  Identities=31%  Similarity=0.508  Sum_probs=65.3

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------cccC-------chhHHHHHHH-----------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------ITND-------TNSILRFLLL-----------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~-------~~~~~~~~~~-----------------------   66 (127)
                      ...+.|++.+.||+|+||.||+|+++.         +...       ...+..++..                       
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   95 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI   95 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence            345789999999999999999999975         0000       0123333332                       


Q ss_pred             -hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+++                         .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus        96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~  166 (302)
T 2j7t_A           96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD-IRLADFGVSAK  166 (302)
T ss_dssp             ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSC-EEECCCHHHHH
T ss_pred             EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCC-EEEEECCCCcc
Confidence             222322                         7899999999999999999999999998 99999998753

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.57  E-value=5.3e-15  Score=106.58  Aligned_cols=85  Identities=29%  Similarity=0.591  Sum_probs=64.9

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------ccc---------------CchhHHHHHHH-----------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITN---------------DTNSILRFLLL-----------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~---------------~~~~~~~~~~~-----------------   66 (127)
                      .++|++.+.||+|+||.||+|+++.         +..               ....|..++..                 
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            4679999999999999999998865         100               11244555544                 


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC--eEEEEeccccee
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS--LLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~--~~kl~dfg~a~~  112 (127)
                            |+.+++                        .|+.|||+++++|+||||+||+++.++.  .+||+|||+++.
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  166 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI  166 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred             eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence                  333332                        7899999999999999999999986432  399999999986

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.56  E-value=1e-14  Score=105.21  Aligned_cols=88  Identities=31%  Similarity=0.401  Sum_probs=66.1

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc---------cc-------------cCchhHHHHHHH---------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT-------------NDTNSILRFLLL---------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~-------------~~~~~~~~~~~~---------------   66 (127)
                      .....++|++.+.||+|+||.||+|++..         +.             .....|..++..               
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~  117 (320)
T 3a99_A           38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF  117 (320)
T ss_dssp             --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred             cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence            34566889999999999999999998864         00             011235555544               


Q ss_pred             -----------hhcc-hh------------------------HHHHHHHHCCcEecCCCCCCEEEe-cCCCeEEEEeccc
Q psy7471          67 -----------LLCA-GD------------------------ACLTFLHRHGVVYRDLKLDNILLD-AGGSLLKLADFGR  109 (127)
Q Consensus        67 -----------~~~~-g~------------------------~al~~lH~~~iih~dlk~~nil~~-~~~~~~kl~dfg~  109 (127)
                                 ++.. ++                        .||.|||+++++|+||||+||+++ .++. +||+|||+
T Consensus       118 ~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~-~kL~Dfg~  196 (320)
T 3a99_A          118 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGS  196 (320)
T ss_dssp             ECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTE-EEECCCTT
T ss_pred             ecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCC-EEEeeCcc
Confidence                       1111 11                        789999999999999999999999 5566 99999999


Q ss_pred             cee
Q psy7471         110 CAR  112 (127)
Q Consensus       110 a~~  112 (127)
                      ++.
T Consensus       197 ~~~  199 (320)
T 3a99_A          197 GAL  199 (320)
T ss_dssp             CEE
T ss_pred             ccc
Confidence            886

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.56  E-value=5.3e-15  Score=105.91  Aligned_cols=87  Identities=31%  Similarity=0.449  Sum_probs=60.1

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc---------cccC-----chhHHHHHHH------------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITND-----TNSILRFLLL------------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~-----~~~~~~~~~~------------------------   66 (127)
                      ....++|++.+.||+|+||.||+|+++.         +...     ...+..++..                        
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            3456789999999999999999999874         1000     1133333332                        


Q ss_pred             hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+++                         .|+.|||.++++|+||+|.||+++.++. ++|+|||++..
T Consensus       105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~kl~dfg~~~~  174 (314)
T 3com_A          105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH-AKLADFGVAGQ  174 (314)
T ss_dssp             CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCC-EEEeecccchh
Confidence            232222                         7899999999999999999999999998 99999999876

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.56  E-value=1.6e-16  Score=123.42  Aligned_cols=39  Identities=28%  Similarity=0.440  Sum_probs=37.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|+|++||+||||||+|||++.++. +||+|||+|+.
T Consensus       350 ~AL~ylH~~GIIHRDIKPeNILL~~dg~-vKL~DFGlAr~  388 (569)
T 4azs_A          350 RSLAALEKQGFWHDDVRPWNVMVDARQH-ARLIDFGSIVT  388 (569)
T ss_dssp             HHHHHHHHTTCEESCCCGGGEEECTTSC-EEECCCTTEES
T ss_pred             HHHHHHHHCCceeccCchHhEEECCCCC-EEEeecccCee
Confidence            8999999999999999999999999999 99999999986

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.56  E-value=7e-15  Score=103.59  Aligned_cols=39  Identities=31%  Similarity=0.550  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       133 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~  171 (284)
T 2a19_B          133 KGVDYIHSKKLINRDLKPSNIFLVDTKQ-VKIGDFGLVTS  171 (284)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEEEETTE-EEECCCTTCEE
T ss_pred             HHHHHHHhCCeeeccCCHHHEEEcCCCC-EEECcchhhee
Confidence            7899999999999999999999999988 99999999886

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.56  E-value=9.4e-15  Score=103.81  Aligned_cols=39  Identities=44%  Similarity=0.667  Sum_probs=37.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||++..
T Consensus       135 ~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~kl~dfg~~~~  173 (298)
T 1phk_A          135 EVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQ  173 (298)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCcccCCCCcceEEEcCCCc-EEEecccchhh
Confidence            7899999999999999999999999998 99999999876

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.56  E-value=8.9e-15  Score=103.98  Aligned_cols=39  Identities=46%  Similarity=0.750  Sum_probs=36.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|+||+++.++. ++|+|||++..
T Consensus       114 ~~l~~lH~~~i~H~dlkp~Nili~~~~~-~kl~dfg~~~~  152 (299)
T 2r3i_A          114 QGLAFCHSHRVLHRDLKPQNLLINTEGA-IKLADFGLARA  152 (299)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECTTSC-EEECSTTHHHH
T ss_pred             HHHHHHHHCCccCCCCCHHHeEEcCCCC-EEECcchhhhh
Confidence            7899999999999999999999999998 99999998865

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.56  E-value=1.4e-14  Score=106.93  Aligned_cols=39  Identities=36%  Similarity=0.589  Sum_probs=34.7

Q ss_pred             HHHHHHH--HCCcEecCCCCCCEEEec--CCCeEEEEeccccee
Q psy7471          73 ACLTFLH--RHGVVYRDLKLDNILLDA--GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH--~~~iih~dlk~~nil~~~--~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||  ..+|+||||||+||+++.  ++. +||+|||+++.
T Consensus       168 ~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~-~kL~DFG~a~~  210 (382)
T 2vx3_A          168 TALLFLATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQ  210 (382)
T ss_dssp             HHHHHHTSTTTCEECCCCSGGGEEESSTTSCC-EEECCCTTCEE
T ss_pred             HHHHHhccCCCCEEcCCCCcccEEEecCCCCc-EEEEeccCcee
Confidence            7899999  469999999999999954  566 99999999987

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.56  E-value=5.1e-15  Score=109.89  Aligned_cols=38  Identities=42%  Similarity=0.685  Sum_probs=35.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++ ++. +||+|||+++.
T Consensus       166 ~aL~~lH~~~ivHrDlkp~NIll~-~~~-~kl~DFG~a~~  203 (390)
T 2zmd_A          166 EAVHTIHQHGIVHSDLKPANFLIV-DGM-LKLIDFGIANQ  203 (390)
T ss_dssp             HHHHHHHTTTCCCCCCCGGGEEES-SSC-EEECCCSSSCC
T ss_pred             HHHHHHHHCCeeecCCCHHHEEEE-CCe-EEEEecCcccc
Confidence            789999999999999999999995 567 99999999986

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.55  E-value=6.1e-15  Score=104.08  Aligned_cols=84  Identities=25%  Similarity=0.403  Sum_probs=64.6

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------ccc-------------CchhHHHHHHH-------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITN-------------DTNSILRFLLL-------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~-------------~~~~~~~~~~~-------------------   66 (127)
                      .++|++.+.||+|+||.||+|+++.         +..             ....|..++..                   
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            3579999999999999999999874         000             01234444443                   


Q ss_pred             -----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCC----CeEEEEeccccee
Q psy7471          67 -----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGG----SLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~----~~~kl~dfg~a~~  112 (127)
                           |+.+++                        .|+.|||+++++|+||+|.||+++.++    . ++|+|||++..
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~-~kl~dfg~~~~  161 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHK  161 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCC-EEECCCTTCEE
T ss_pred             EEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCc-eEEEeccccee
Confidence                 332322                        789999999999999999999998776    6 99999999886

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.55  E-value=6.3e-15  Score=107.63  Aligned_cols=39  Identities=38%  Similarity=0.566  Sum_probs=35.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. ++|+|||+++.
T Consensus       145 ~~l~~lH~~~ivH~Dlkp~NIl~~~~~~-~kl~Dfg~~~~  183 (362)
T 3pg1_A          145 LGLHVLHEAGVVHRDLHPGNILLADNND-ITICDFNLARE  183 (362)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECTTCC-EEECCTTC---
T ss_pred             HHHHHHHHCcCEecCCChHHEEEcCCCC-EEEEecCcccc
Confidence            7899999999999999999999999998 99999999875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.55  E-value=3.1e-15  Score=107.88  Aligned_cols=93  Identities=28%  Similarity=0.440  Sum_probs=68.4

Q ss_pred             CCCCCCcccCCCeEEEEEeceeCCceEEEEEEcc---------ccc--CchhHHHHHHH---------------------
Q psy7471          19 SSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITN--DTNSILRFLLL---------------------   66 (127)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~--~~~~~~~~~~~---------------------   66 (127)
                      .+...+.+..++|++.+.||+|+||.||+|+++.         +..  .......++.+                     
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~   91 (327)
T 3aln_A           12 SPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF   91 (327)
T ss_dssp             CCCEEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE
T ss_pred             ChHHhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE
Confidence            3455677888999999999999999999999974         111  11111111111                     


Q ss_pred             ----------hhcchh----------------------------HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEec
Q psy7471          67 ----------LLCAGD----------------------------ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADF  107 (127)
Q Consensus        67 ----------~~~~g~----------------------------~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~df  107 (127)
                                |+.++.                            .|+.|||.+ +++|+||||.||+++.++. +||+||
T Consensus        92 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~-~kl~Df  170 (327)
T 3aln_A           92 REGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN-IKLCDF  170 (327)
T ss_dssp             CSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTE-EEECCC
T ss_pred             eCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCC-EEEccC
Confidence                      222110                            789999998 9999999999999999988 999999


Q ss_pred             cccee
Q psy7471         108 GRCAR  112 (127)
Q Consensus       108 g~a~~  112 (127)
                      |+++.
T Consensus       171 g~~~~  175 (327)
T 3aln_A          171 GISGQ  175 (327)
T ss_dssp             SSSCC
T ss_pred             CCcee
Confidence            99876

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.55  E-value=9.9e-15  Score=106.49  Aligned_cols=39  Identities=31%  Similarity=0.535  Sum_probs=36.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC--CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG--SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~--~~~kl~dfg~a~~  112 (127)
                      .||.|||+++++|+||||+||+++.++  . ++|+|||+++.
T Consensus       170 ~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~-~kl~Dfg~a~~  210 (352)
T 2jii_A          170 DALEFLHENEYVHGNVTAENIFVDPEDQSQ-VTLAGYGFAFR  210 (352)
T ss_dssp             HHHHHHHHTTCBCSCCCGGGEEEETTEEEE-EEECCGGGCBC
T ss_pred             HHHHHHHhCCccCCCCCHHHEEEcCCCCce-EEEecCcceee
Confidence            789999999999999999999999887  6 99999999975

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.55  E-value=7.5e-15  Score=104.06  Aligned_cols=39  Identities=36%  Similarity=0.728  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|+||+++.++. ++|+|||+++.
T Consensus       127 ~~l~~LH~~~i~H~dlkp~Nil~~~~~~-~kl~dfg~~~~  165 (303)
T 1zy4_A          127 EALSYIHSQGIIHRDLKPMNIFIDESRN-VKIGDFGLAKN  165 (303)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECTTSC-EEECCCCCCSC
T ss_pred             HHHHHHHhCCeecccCCHHhEEEcCCCC-EEEeeCcchhh
Confidence            7899999999999999999999999998 99999999875

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.55  E-value=1e-14  Score=105.72  Aligned_cols=39  Identities=36%  Similarity=0.709  Sum_probs=36.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC--CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG--SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~--~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++  . +||+|||+++.
T Consensus       179 ~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~-~kl~Dfg~a~~  219 (345)
T 3hko_A          179 SALHYLHNQGICHRDIKPENFLFSTNKSFE-IKLVDFGLSKE  219 (345)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEESCSSSCC-EEECCCTTCEE
T ss_pred             HHHHHHHHCCccccCCChhhEEEecCCCce-EEEeecccccc
Confidence            689999999999999999999998766  6 99999999985

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.55  E-value=1.6e-14  Score=102.48  Aligned_cols=39  Identities=41%  Similarity=0.689  Sum_probs=35.8

Q ss_pred             HHHHHHHHCC--cEecCCCCCCEEEe-cCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHG--VVYRDLKLDNILLD-AGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~--iih~dlk~~nil~~-~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++  ++|+||||.||+++ .++. ++|+|||++..
T Consensus       140 ~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~-~kl~Dfg~~~~  181 (290)
T 1t4h_A          140 KGLQFLHTRTPPIIHRDLKCDNIFITGPTGS-VKIGDLGLATL  181 (290)
T ss_dssp             HHHHHHHTSSSCCCCSCCCGGGEEESSTTSC-EEECCTTGGGG
T ss_pred             HHHHHHHcCCCCEEECCCCHHHEEEECCCCC-EEEeeCCCccc
Confidence            7899999999  99999999999998 6677 99999999865

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.54  E-value=2.5e-15  Score=108.51  Aligned_cols=39  Identities=28%  Similarity=0.474  Sum_probs=34.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.   ... ++|+|||+++.
T Consensus       151 ~al~~LH~~~i~H~dlkp~NIli~~~~~~~~-~kl~Dfg~~~~  192 (327)
T 2yfx_A          151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGMARD  192 (327)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEESCSSTTCC-EEECCCHHHHH
T ss_pred             HHHHHHhhCCeecCcCCHhHEEEecCCCcce-EEECccccccc
Confidence            6899999999999999999999983   445 99999998864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.54  E-value=1.1e-14  Score=105.32  Aligned_cols=84  Identities=27%  Similarity=0.437  Sum_probs=64.7

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc-------cccCc----hhHHHHHHH------------------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS-------ITNDT----NSILRFLLL------------------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~~----~~~~~~~~~------------------------------   66 (127)
                      .++|++.+.||+|+||.||+|++.+       +....    ..+.+++..                              
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  120 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD  120 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEEC
T ss_pred             cccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEe
Confidence            4789999999999999999999866       10000    122223322                              


Q ss_pred             hhcchh-----------------------HHHHHHH--------HCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD-----------------------ACLTFLH--------RHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~-----------------------~al~~lH--------~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+|+                       .|+.|||        +++++|+||||+||+++.++. +||+|||+++.
T Consensus       121 ~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~-~kL~Dfg~~~~  196 (342)
T 1b6c_B          121 YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT-CCIADLGLAVR  196 (342)
T ss_dssp             CCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             ecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCC-EEEEECCCcee
Confidence            333333                       7899999        899999999999999999998 99999999876

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.54  E-value=7e-15  Score=105.38  Aligned_cols=86  Identities=26%  Similarity=0.367  Sum_probs=62.9

Q ss_pred             cCCCeEEE-EEeceeCCceEEEEEEcc---------cccC-------chhHHHHHHH-----------------------
Q psy7471          27 GLEDFHFI-KVLGKGSFGKELFGHYRS---------ITND-------TNSILRFLLL-----------------------   66 (127)
Q Consensus        27 ~~~~~~~~-~~lg~G~fg~V~~~~~~~---------~~~~-------~~~~~~~~~~-----------------------   66 (127)
                      ..+.|++. +.||+|+||.||+|+++.         +...       ...|..++..                       
T Consensus        10 ~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv   89 (316)
T 2ac3_A           10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV   89 (316)
T ss_dssp             TTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence            45789985 789999999999998764         1000       1134444433                       


Q ss_pred             --hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC--eEEEEeccccee
Q psy7471          67 --LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS--LLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~--~~kl~dfg~a~~  112 (127)
                        |+.+++                        .|+.|||+++++|+||||+||+++.++.  .+||+|||+++.
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~  163 (316)
T 2ac3_A           90 FEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG  163 (316)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred             EEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence              333333                        7899999999999999999999986543  289999999875

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.54  E-value=1.9e-14  Score=104.89  Aligned_cols=39  Identities=38%  Similarity=0.627  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||.||+++.++. +||+|||+++.
T Consensus       137 ~al~~LH~~~ivH~dlkp~NIl~~~~~~-~kl~Dfg~~~~  175 (353)
T 3coi_A          137 KGLKYIHSAGVVHRDLKPGNLAVNEDCE-LKILDFGLARH  175 (353)
T ss_dssp             HHHHHHHHTTCCCSSCCGGGEEECTTCC-EEECSTTCTTC
T ss_pred             HHHHHHHHCCcccCCCCHHHEeECCCCc-EEEeecccccC
Confidence            7899999999999999999999999998 99999999876

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.53  E-value=1.1e-14  Score=103.95  Aligned_cols=84  Identities=30%  Similarity=0.585  Sum_probs=64.3

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cccC-------chhHHHHHHH------------------------h
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITND-------TNSILRFLLL------------------------L   67 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~-------~~~~~~~~~~------------------------~   67 (127)
                      .++|++.+.||+|+||.||+|+++.         +...       ...|..++..                        |
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            4679999999999999999999864         1110       1134444433                        3


Q ss_pred             hcchh------------------------HHHHHHHHCCcEecCCCCCCEEE---ecCCCeEEEEeccccee
Q psy7471          68 LCAGD------------------------ACLTFLHRHGVVYRDLKLDNILL---DAGGSLLKLADFGRCAR  112 (127)
Q Consensus        68 ~~~g~------------------------~al~~lH~~~iih~dlk~~nil~---~~~~~~~kl~dfg~a~~  112 (127)
                      +.+++                        .|+.|||+++++|+||+|+||++   +.++. ++|+|||+++.
T Consensus        88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~-~kl~Dfg~~~~  158 (304)
T 2jam_A           88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSK-IMITDFGLSKM  158 (304)
T ss_dssp             CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCC-EEBCSCSTTCC
T ss_pred             CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCC-EEEccCCccee
Confidence            33332                        78999999999999999999999   56677 99999999875

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.53  E-value=4.4e-15  Score=110.36  Aligned_cols=39  Identities=38%  Similarity=0.554  Sum_probs=35.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEE----ecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILL----DAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~----~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||++    +..+. +||+|||+++.
T Consensus       139 ~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~-~kl~Dfg~a~~  181 (405)
T 3rgf_A          139 DGIHYLHANWVLHRDLKPANILVMGEGPERGR-VKIADMGFARL  181 (405)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECCSSTTTTC-EEECCTTCCC-
T ss_pred             HHHHHHHhCCEeCCCcCHHHeEEecCCCCCCc-EEEEECCCcee
Confidence            78999999999999999999999    55667 99999999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.53  E-value=7.3e-15  Score=104.12  Aligned_cols=39  Identities=44%  Similarity=0.796  Sum_probs=36.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEec-CCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDA-GGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~-~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++. ++. ++|+|||+++.
T Consensus       133 ~~l~~lH~~~i~H~dl~p~Nil~~~~~~~-~kl~Dfg~~~~  172 (295)
T 2clq_A          133 EGLKYLHDNQIVHRDIKGDNVLINTYSGV-LKISDFGTSKR  172 (295)
T ss_dssp             HHHHHHHHTTEECCCCSGGGEEEETTTCC-EEECCTTTCEE
T ss_pred             HHHHHHHhCCEEccCCChhhEEEECCCCC-EEEeecccccc
Confidence            7899999999999999999999997 677 99999999886

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.53  E-value=7.2e-15  Score=103.54  Aligned_cols=39  Identities=41%  Similarity=0.571  Sum_probs=35.7

Q ss_pred             HHHHHHHHCC-----cEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHG-----VVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~-----iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+.+     ++|+||+|.||+++.++. ++|+|||+++.
T Consensus       122 ~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~-~kl~dfg~~~~  165 (279)
T 2w5a_A          122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARI  165 (279)
T ss_dssp             HHHHHHHHHC------CCCCCSGGGEEECSSSC-EEECCCCHHHH
T ss_pred             HHHHHHhcccCCCCeeEEeccchhhEEEcCCCC-EEEecCchhee
Confidence            7899999998     999999999999999998 99999999865

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.53  E-value=3.8e-14  Score=101.79  Aligned_cols=39  Identities=54%  Similarity=0.777  Sum_probs=37.2

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       131 ~~l~~lH~~gi~H~dlkp~Nili~~~~~-~kl~Dfg~~~~  169 (326)
T 1blx_A          131 RGLDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFGLARI  169 (326)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECTTCC-EEECSCCSCCC
T ss_pred             HHHHHHHHCCceeccCCHHHeEEcCCCC-EEEecCccccc
Confidence            7899999999999999999999999998 99999999876

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.52  E-value=2.1e-14  Score=110.88  Aligned_cols=38  Identities=29%  Similarity=0.462  Sum_probs=36.0

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK  113 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~  113 (127)
                      .|+.|||+++|+||||||+||+++.  . +||+|||+++..
T Consensus       442 ~aL~~LH~~gIiHrDiKp~NILl~~--~-~kL~DFGla~~~  479 (540)
T 3en9_A          442 EIVGKLHKNDVIHNDLTTSNFIFDK--D-LYIIDFGLGKIS  479 (540)
T ss_dssp             HHHHHHHHTTEECTTCCTTSEEESS--S-EEECCCTTCEEC
T ss_pred             HHHHHHHHCcCccCCCCHHHEEECC--e-EEEEECccCEEC
Confidence            7899999999999999999999998  6 999999999973

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.52  E-value=5.2e-14  Score=102.82  Aligned_cols=39  Identities=31%  Similarity=0.670  Sum_probs=34.5

Q ss_pred             HHHHHHHHC-CcEecCCCCCCEEEecCC------CeEEEEeccccee
Q psy7471          73 ACLTFLHRH-GVVYRDLKLDNILLDAGG------SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~-~iih~dlk~~nil~~~~~------~~~kl~dfg~a~~  112 (127)
                      .||.|||++ +|+|+||||+||+++..+      . +||+|||+++.
T Consensus       142 ~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~-~kl~Dfg~a~~  187 (373)
T 1q8y_A          142 LGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ-IKIADLGNACW  187 (373)
T ss_dssp             HHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE-EEECCCTTCEE
T ss_pred             HHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce-EEEcccccccc
Confidence            789999998 999999999999996432      4 99999999986

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.51  E-value=7e-15  Score=104.98  Aligned_cols=39  Identities=38%  Similarity=0.588  Sum_probs=37.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++. ++|+|||+++.
T Consensus       144 ~~l~~lH~~~i~H~dlkp~Nili~~~~~-~kl~Dfg~~~~  182 (307)
T 2nru_A          144 NGINFLHENHHIHRDIKSANILLDEAFT-AKISDFGLARA  182 (307)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             HHHHHHhcCCeecCCCCHHHEEEcCCCc-EEEeecccccc
Confidence            7899999999999999999999999998 99999999876

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.51  E-value=1.3e-14  Score=103.76  Aligned_cols=39  Identities=49%  Similarity=0.807  Sum_probs=35.3

Q ss_pred             HHHHHHHHC-CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRH-GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~-~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||++ +++|+||+|.||+++.++. ++|+|||+++.
T Consensus       135 ~~l~~lH~~~~i~H~dlkp~Nil~~~~~~-~kl~dfg~~~~  174 (318)
T 2dyl_A          135 KALYYLKEKHGVIHRDVKPSNILLDERGQ-IKLCDFGISGR  174 (318)
T ss_dssp             HHHHHHHHHHCCCCCCCCGGGEEECTTSC-EEECCCTTC--
T ss_pred             HHHHHHHhhCCEEeCCCCHHHEEECCCCC-EEEEECCCchh
Confidence            789999995 9999999999999999998 99999999865

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.50  E-value=4.1e-14  Score=102.61  Aligned_cols=39  Identities=36%  Similarity=0.725  Sum_probs=37.2

Q ss_pred             HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+ ++++|+||+|.||+++.++. ++|+|||++..
T Consensus       162 ~~l~~lH~~~~i~H~dl~p~Nil~~~~~~-~kl~dfg~~~~  201 (348)
T 2pml_X          162 NSFSYIHNEKNICHRDVKPSNILMDKNGR-VKLSDFGESEY  201 (348)
T ss_dssp             HHHHHHHHTSCEECCCCCGGGEEECTTSC-EEECCCTTCEE
T ss_pred             HHHHHHhccCCEeecCCChHhEEEcCCCc-EEEeccccccc
Confidence            78999999 99999999999999999998 99999999886

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.50  E-value=6.1e-14  Score=100.17  Aligned_cols=40  Identities=33%  Similarity=0.576  Sum_probs=35.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||||+||+++.....+||+|||+++.
T Consensus       131 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~  170 (320)
T 2i6l_A          131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI  170 (320)
T ss_dssp             HHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBC
T ss_pred             HHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccc
Confidence            7899999999999999999999985443399999999875

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.48  E-value=3.2e-14  Score=100.86  Aligned_cols=86  Identities=34%  Similarity=0.554  Sum_probs=63.6

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------cc----cC------chhHHHHHHH---------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------IT----ND------TNSILRFLLL---------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~----~~------~~~~~~~~~~---------------------   66 (127)
                      ...++|++.+.||+|+||.||+|+++.        ..    ..      ...+..++..                     
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            345789999999999999999999864        00    00      0123333332                     


Q ss_pred             ---hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecC---CCeEEEEeccccee
Q psy7471          67 ---LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAG---GSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~---~~~~kl~dfg~a~~  112 (127)
                         |+.+++                        .|+.|||.++++|+||+|.||+++..   .. ++|+|||++..
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~-~kL~Dfg~~~~  173 (287)
T 2wei_A           99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCD-IKIIDFGLSTC  173 (287)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCC-EEECSTTGGGT
T ss_pred             EEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCccc-EEEeccCccee
Confidence               222322                        78999999999999999999999754   35 99999998875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.48  E-value=4.3e-14  Score=101.33  Aligned_cols=90  Identities=27%  Similarity=0.347  Sum_probs=65.1

Q ss_pred             CCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------cc--cCc-------hhHHHHHHHhh---------------
Q psy7471          21 GGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------IT--NDT-------NSILRFLLLLL---------------   68 (127)
Q Consensus        21 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~--~~~-------~~~~~~~~~~~---------------   68 (127)
                      .....+...+|++.+.||+|+||.||+|++..        +.  ...       ..|..++...-               
T Consensus        20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~   99 (313)
T 3cek_A           20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT   99 (313)
T ss_dssp             CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred             eeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence            33445556779999999999999999998765        10  011       13333333311               


Q ss_pred             ----------cchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          69 ----------CAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        69 ----------~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                                .+++                        .|+.|||+++++|+||||.||+++. +. +||+|||+++.
T Consensus       100 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~-~kL~Dfg~~~~  175 (313)
T 3cek_A          100 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GM-LKLIDFGIANQ  175 (313)
T ss_dssp             SSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TE-EEECCCSSSCC
T ss_pred             CCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-Ce-EEEeecccccc
Confidence                      0011                        7899999999999999999999974 66 99999999876

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.46  E-value=1.1e-13  Score=104.09  Aligned_cols=39  Identities=38%  Similarity=0.603  Sum_probs=34.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecC-----CCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAG-----GSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~-----~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++..     .. ++|+|||+++.
T Consensus       129 ~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~-~kL~DFG~a~~  172 (432)
T 3p23_A          129 SGLAHLHSLNIVHRDLKPHNILISMPNAHGKIK-AMISDFGLCKK  172 (432)
T ss_dssp             HHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCC-EEECCTTEEEC
T ss_pred             HHHHHHHHCcCEeCCCCHHHEEEecCCCCCcee-EEEecccceee
Confidence            78999999999999999999999532     24 88999999986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.43  E-value=4.2e-13  Score=100.82  Aligned_cols=40  Identities=33%  Similarity=0.610  Sum_probs=35.3

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCC------------CeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGG------------SLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~------------~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++..+            ..+||+|||+++.
T Consensus       126 ~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~  177 (434)
T 2rio_A          126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK  177 (434)
T ss_dssp             HHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEE
T ss_pred             HHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEccccccee
Confidence            689999999999999999999997542            1399999999987

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.43  E-value=5e-13  Score=94.19  Aligned_cols=37  Identities=22%  Similarity=0.231  Sum_probs=35.0

Q ss_pred             HHHHHHH-HCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLH-RHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH-~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.||| .++|+|+||||.|||++.  . ++|+|||+|..
T Consensus       181 ~~l~~lH~~~givHrDlkp~NILl~~--~-~~liDFG~a~~  218 (258)
T 1zth_A          181 ENVKRLYQEAELVHADLSEYNIMYID--K-VYFIDMGQAVT  218 (258)
T ss_dssp             HHHHHHHHTSCEECSSCSTTSEEESS--S-EEECCCTTCEE
T ss_pred             HHHHHHHHHCCEEeCCCCHHHEEEcC--c-EEEEECccccc
Confidence            7899999 999999999999999998  6 99999999986

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.38  E-value=6.8e-14  Score=110.51  Aligned_cols=40  Identities=35%  Similarity=0.669  Sum_probs=35.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCC--eEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGS--LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~--~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++|+||+|.||+++.++.  .++|+|||+++.
T Consensus       132 ~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~  173 (676)
T 3qa8_A          132 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE  173 (676)
T ss_dssp             HHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred             HHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence            7899999999999999999999986543  389999999987

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.21  E-value=2e-11  Score=91.20  Aligned_cols=39  Identities=23%  Similarity=0.304  Sum_probs=32.9

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCC---------eEEEEecccce
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGS---------LLKLADFGRCA  111 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~---------~~kl~dfg~a~  111 (127)
                      .++.+||.++++||||||.|||++.++.         .+.|+||+=+-
T Consensus       216 ~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          216 ALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             HHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             HHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence            7899999999999999999999987652         27899997443

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.63  E-value=0.00016  Score=50.08  Aligned_cols=31  Identities=29%  Similarity=0.350  Sum_probs=25.4

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..++|+|++|.||+++.... +.|+||+.+..
T Consensus       183 ~~l~HgDl~~~Nil~~~~~~-~~lIDwe~a~~  213 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDGKV-SGFIDLGRSGR  213 (263)
T ss_dssp             EEEECSSCCTTSEEEETTEE-EEECCCTTCEE
T ss_pred             ceEECCCCCcCcEEEECCcE-EEEEEchhccc
Confidence            34899999999999986544 67999998765

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.83  E-value=0.00062  Score=46.52  Aligned_cols=29  Identities=31%  Similarity=0.369  Sum_probs=25.2

Q ss_pred             cEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          83 VVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        83 iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ++|+|++|.||+++.... +.++||+.+..
T Consensus       186 l~HgDl~~~Nil~~~~~~-~~liD~~~a~~  214 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRF-SGFIDCGRLGV  214 (264)
T ss_dssp             EECSSCCGGGEEEETTEE-EEECCCTTCEE
T ss_pred             EECCCCCCCcEEEECCcE-EEEEcchhccc
Confidence            999999999999986654 67999998765

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.74  E-value=0.011  Score=41.94  Aligned_cols=31  Identities=16%  Similarity=0.203  Sum_probs=27.5

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..++|+|+.+.|++++.++. +.++||+.+..
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~-~~lIDfe~a~~  252 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQ-IWVIDLDTVSF  252 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGC-EEECCCTTCEE
T ss_pred             CceecCCCCcccEEEeCCCc-EEEEehhhccc
Confidence            57999999999999987777 99999998765

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.09  E-value=0.012  Score=42.53  Aligned_cols=32  Identities=22%  Similarity=0.410  Sum_probs=26.6

Q ss_pred             CCcEecCCCCCCEEEecCC-CeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGG-SLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~-~~~kl~dfg~a~~  112 (127)
                      ..++|+|++|.||+++.++ ..+.++||+.+..
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            3699999999999998764 3358999998876

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=94.32  E-value=0.016  Score=40.87  Aligned_cols=31  Identities=29%  Similarity=0.524  Sum_probs=25.9

Q ss_pred             CcEecCCCCCCEEEecC-CCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAG-GSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~-~~~~kl~dfg~a~~  112 (127)
                      .++|+|++|.||+++.+ +..+.++||+.+..
T Consensus       192 ~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             EEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence            58999999999999984 33278999998775

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=93.76  E-value=0.03  Score=38.50  Aligned_cols=30  Identities=33%  Similarity=0.506  Sum_probs=25.3

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.+.|++++.... +-|+||+.+..
T Consensus       194 ~l~HGDl~~~Nil~~~~~~-~~viDwe~a~~  223 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKL-IGCIDVGRVGI  223 (272)
T ss_dssp             EEECSCCCTTSEEEETTEE-EEECCCTTCEE
T ss_pred             EEEcCCCCCCeEEEECCeE-EEEEECccccc
Confidence            3899999999999987655 77999988765

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=93.04  E-value=0.037  Score=39.13  Aligned_cols=30  Identities=30%  Similarity=0.326  Sum_probs=25.4

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.+.|++++.+.. +.++||+.+..
T Consensus       188 ~liHgDl~~~Nil~~~~~~-~~lIDf~~a~~  217 (322)
T 2ppq_A          188 GVIHADLFQDNVFFLGDEL-SGLIDFYFACN  217 (322)
T ss_dssp             EEECSCCCGGGEEEETTEE-EEECCCTTCEE
T ss_pred             ccCCCCCCccCEEEeCCce-EEEecchhccC
Confidence            6899999999999987654 68999987765

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=92.70  E-value=0.056  Score=39.97  Aligned_cols=31  Identities=13%  Similarity=0.171  Sum_probs=26.7

Q ss_pred             HCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          80 RHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        80 ~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ...++|+|++|.||+++.+ . +.++||+.+..
T Consensus       231 ~~~liHGDl~~~Nil~~~~-~-~~lID~e~a~~  261 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQD-S-TQVIDPEFSFY  261 (420)
T ss_dssp             CCEEECSCCSGGGEEECSS-C-EEECCCTTCEE
T ss_pred             CCeEEecCCCCCcEEEeCC-C-CEEEeCccccc
Confidence            4579999999999999865 4 89999988776

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=92.68  E-value=0.045  Score=39.32  Aligned_cols=31  Identities=16%  Similarity=0.248  Sum_probs=25.7

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..++|+|+.|.||+++.... +.|+||..+..
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~-~~vIDwe~a~~  252 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQP-VAVLDWEMVAL  252 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEE-EEECCGGGCEE
T ss_pred             ceEEeCCCCCCeEEEeCCcE-EEEEccccccc
Confidence            46899999999999995333 78999988765

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=92.13  E-value=0.065  Score=37.97  Aligned_cols=31  Identities=29%  Similarity=0.412  Sum_probs=25.6

Q ss_pred             CcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.|.|++++.   .+..+.|+||+.+..
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            6799999999999987   355258999998765

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=92.03  E-value=0.063  Score=38.24  Aligned_cols=31  Identities=23%  Similarity=0.261  Sum_probs=26.6

Q ss_pred             CCcEecCCCCCCEEEecC----CCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAG----GSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~----~~~~kl~dfg~a~~  112 (127)
                      ..++|+|+.+.|++++.+    .. +.++||..+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~-~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLAR-VGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGG-EEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCC-eEEEeCCCcCc
Confidence            479999999999999864    55 89999998776

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=90.85  E-value=0.089  Score=37.22  Aligned_cols=29  Identities=17%  Similarity=0.109  Sum_probs=24.9

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..++|+|+.+.||+++ + . +.++||..+..
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~-~~lIDfe~a~~  223 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-G-PMFVDLDDARN  223 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-S-EEECCCTTCCE
T ss_pred             eeeeeCCCCcccEeEc-C-C-CEEEECCCCCc
Confidence            3588999999999998 4 6 99999987765

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=90.45  E-value=0.13  Score=36.18  Aligned_cols=29  Identities=21%  Similarity=0.280  Sum_probs=24.7

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.+.|++ ..++. +.++||..+..
T Consensus       174 ~l~HgDl~~~Nil-~~~~~-~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGER-MWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSC-EEECCCTTCEE
T ss_pred             eeeccCCCcCCEE-ECCCC-EEEEecccccC
Confidence            4899999999999 55667 89999987765

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=90.17  E-value=0.11  Score=38.88  Aligned_cols=30  Identities=33%  Similarity=0.361  Sum_probs=24.7

Q ss_pred             CcEecCCCCCCEEEecC----------------------------CCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAG----------------------------GSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~----------------------------~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.+.||+++.+                            .. +.++||..+..
T Consensus       250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lIDfEya~~  307 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPR-LVLIDFEYASY  307 (429)
T ss_dssp             EEECSCCCGGGEEEEC------------------------------C-CEECCCTTCEE
T ss_pred             EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCe-EEEEecccCCc
Confidence            58999999999999875                            55 89999987765

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=90.01  E-value=0.13  Score=37.02  Aligned_cols=31  Identities=16%  Similarity=0.211  Sum_probs=27.1

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..++|.|+.+.|++++.++. +.++||..+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~-~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEES-IYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGC-EEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCe-EEEEECCCCee
Confidence            36999999999999987777 99999987665

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=89.94  E-value=0.15  Score=38.53  Aligned_cols=15  Identities=27%  Similarity=0.151  Sum_probs=14.1

Q ss_pred             CcEecCCCCCCEEEe
Q psy7471          82 GVVYRDLKLDNILLD   96 (127)
Q Consensus        82 ~iih~dlk~~nil~~   96 (127)
                      .++|+|+.+.||+++
T Consensus       291 v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          291 VLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEECSCCCGGGEEEC
T ss_pred             eEEecCCCCCcEEee
Confidence            589999999999998

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=89.33  E-value=0.2  Score=36.97  Aligned_cols=30  Identities=33%  Similarity=0.344  Sum_probs=26.3

Q ss_pred             CcEecCCCCCCEEEecC----CCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAG----GSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~----~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.+.||+++.+    .. +.++||..+..
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~-~~~IDwE~a~~  254 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADS-LMLVDFEYSSY  254 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CC-EEECCCTTCEE
T ss_pred             EEEcCCCCCCeEEEcCCCCccCc-EEEEecccCCc
Confidence            58999999999999876    56 99999988765

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=88.89  E-value=0.21  Score=36.37  Aligned_cols=30  Identities=17%  Similarity=0.117  Sum_probs=25.4

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ..++|+|+.|.||+++.+ . +.++||..+..
T Consensus       227 ~~L~HGDl~~~Nil~~~~-~-~~lID~e~a~~  256 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEH-E-TKVIDPEFAFY  256 (397)
T ss_dssp             CEEECSCCSGGGEEECSS-C-EEECCCTTCEE
T ss_pred             CceeeCCCCcCcEEEeCC-C-eEEEeCccccc
Confidence            468999999999999764 5 89999987765

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=88.77  E-value=0.19  Score=36.30  Aligned_cols=29  Identities=28%  Similarity=0.314  Sum_probs=24.0

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.+.||+++. +. +.++||..+..
T Consensus       213 ~l~HgDl~~~Nil~~~-~~-~~lID~e~a~~  241 (369)
T 3c5i_A          213 VFCHNDLQENNIINTN-KC-LRLIDFEYSGF  241 (369)
T ss_dssp             EEECSCCCGGGEEECC--C-EEECCCTTCEE
T ss_pred             EEEeCCCCcccEEecC-Cc-EEEEEecCCCC
Confidence            5899999999999874 45 89999987665

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=87.47  E-value=0.28  Score=36.13  Aligned_cols=30  Identities=30%  Similarity=0.235  Sum_probs=24.3

Q ss_pred             CcEecCCCCCCEEEe------cCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLD------AGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~------~~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.+.||++.      .... +.++||-.|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~-l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQK-LMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCC-EEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCe-EEEechHhccC
Confidence            367999999999994      3445 99999988765

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=84.11  E-value=0.49  Score=35.43  Aligned_cols=29  Identities=21%  Similarity=0.367  Sum_probs=25.2

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.+.|++ +.... +.++||..+..
T Consensus       263 ~~~H~D~~~~N~l-~~~~~-~~~IDwe~a~~  291 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNN-IRMIDYEYSAI  291 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSC-EEECCCTTCEE
T ss_pred             eEECCCCCcccee-cCCCc-EEEEecccCCc
Confidence            5899999999999 66677 99999988775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	127
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-10
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	9e-10
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	8e-09
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	0.004
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-08
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-08
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-08
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-08
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-08
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-08
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-08
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-08
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-08
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-08
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-07
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-07
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-07
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-07
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-07
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-07
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-04
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	8e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	0.003
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-06
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-06
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-06
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-06
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-05
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-05
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-05
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	8e-05
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-05
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-04
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-04
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-04
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-04
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	0.003
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	8e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	0.001
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	0.002
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	0.002
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	0.002
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.003

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 6e-10
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 40  GSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGG 99
           G+    +    R +T     I       L A    L +LH + +++RDLK  NIL    G
Sbjct: 94  GAVDAVMLELERPLTESQ--IQVVCKQTLDA----LNYLHDNKIIHRDLKAGNILFTLDG 147

Query: 100 SLLKLADFGRCAR 112
             +KLADFG  A+
Sbjct: 148 D-IKLADFGVSAK 159

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 7e-10
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
              ++   + ++          +  L      L++ H   V++RD+K +N+LL + G  L
Sbjct: 90  LGTVYRELQKLSKFDEQRTATYITELANA---LSYCHSKRVIHRDIKPENLLLGSAGE-L 145

Query: 103 KLADFG 108
           K+ADFG
Sbjct: 146 KIADFG 151

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 52.8 bits (126), Expect = 9e-10
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G +L  H       + + +RF    +  G   L  +H   VVYRDLK  NILLD  G  +
Sbjct: 91  GGDLHYHLSQHGVFSEADMRFYAAEIILG---LEHMHNRFVVYRDLKPANILLDEHGH-V 146

Query: 103 KLADFGRC 110
           +++D G  
Sbjct: 147 RISDLGLA 154

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.1 bits (119), Expect = 8e-09
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 4/68 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF   R      N + +F    +C     L +LH   ++YRDLK +NILLD  G  +
Sbjct: 88  GGELFSLLRKSQRFPNPVAKFYAAEVCL---ALEYLHSKDIIYRDLKPENILLDKNGH-I 143

Query: 103 KLADFGRC 110
           K+ DFG  
Sbjct: 144 KITDFGFA 151

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.5 bits (76), Expect = 0.004
 Identities = 9/17 (52%), Positives = 13/17 (76%)

Query: 28 LEDFHFIKVLGKGSFGK 44
          L+DF  ++ LG GSFG+
Sbjct: 3  LQDFQILRTLGTGSFGR 19

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (116), Expect = 2e-08
 Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 42  FGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSL 101
            G  L         D   I       L A    L FLH + V++RD+K DNILL   GS 
Sbjct: 100 AGGSLTDVVTETCMDEGQIAAVCRECLQA----LEFLHSNQVIHRDIKSDNILLGMDGS- 154

Query: 102 LKLADFGRCAR 112
           +KL DFG CA+
Sbjct: 155 VKLTDFGFCAQ 165

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 48.9 bits (116), Expect = 2e-08
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
             ELF +       +    R ++  L      +  LH+  +V+RDLK +NILLD   + +
Sbjct: 94  KGELFDYLTEKVTLSEKETRKIMRALLEV---ICALHKLNIVHRDLKPENILLDDDMN-I 149

Query: 103 KLADFGRCAR 112
           KL DFG   +
Sbjct: 150 KLTDFGFSCQ 159

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 2e-08
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 5/67 (7%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLH-RHGVVYRDLKLDNILLDAGGSL 101
           G  L    +        IL  + + +  G   LT+L  +H +++RD+K  NIL+++ G  
Sbjct: 88  GGSLDQVLKKAGRIPEQILGKVSIAVIKG---LTYLREKHKIMHRDVKPSNILVNSRGE- 143

Query: 102 LKLADFG 108
           +KL DFG
Sbjct: 144 IKLCDFG 150

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 48.5 bits (115), Expect = 2e-08
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 7/74 (9%)

Query: 40  GSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGG 99
           G   +++   +  ++ D    + ++  +       L  +H +  V+ DLK +NI+     
Sbjct: 108 GELFEKVADEHNKMSEDE--AVEYMRQVCKG----LCHMHENNYVHLDLKPENIMFTTKR 161

Query: 100 SL-LKLADFGRCAR 112
           S  LKL DFG  A 
Sbjct: 162 SNELKLIDFGLTAH 175

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 3e-08
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF              +     L AG   + +LH  G+ +RD+K +N+LLD   + L
Sbjct: 87  GGELFDRIEPDIGMPEPDAQRFFHQLMAG---VVYLHGIGITHRDIKPENLLLDERDN-L 142

Query: 103 KLADFGRC 110
           K++DFG  
Sbjct: 143 KISDFGLA 150

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 5e-08
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHG--VVYRDLKLDNILLDAGGS 100
              L  + +        +LR     +  G     FLH     +++RDLK DNI +     
Sbjct: 96  SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQ---FLHTRTPPIIHRDLKCDNIFITGPTG 152

Query: 101 LLKLADFG 108
            +K+ D G
Sbjct: 153 SVKIGDLG 160

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 6e-08
 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 28  LEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDAC--LTFLHRHGVVY 85
           L ++   K         E     R    +  ++L F  LL  A      + FL     V+
Sbjct: 128 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH 187

Query: 86  RDLKLDNILLDAGGSLLKLADFG 108
           RDL   N+L+  G   +K+ DFG
Sbjct: 188 RDLAARNVLVTHGKV-VKICDFG 209

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 47.1 bits (111), Expect = 7e-08
 Identities = 19/143 (13%), Positives = 41/143 (28%), Gaps = 61/143 (42%)

Query: 29  EDFHFIKVLGKGSFGK----------------------------------ELFGH----- 49
           +D+  ++ LG+G + +                                   L G      
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 94

Query: 50  -YRSITNDTNSILRFLLLLLCAGD---------------------ACLTFLHRHGVVYRD 87
               + +  +     +   +   D                       L + H  G+++RD
Sbjct: 95  LADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRD 154

Query: 88  LKLDNILLDAGGSLLKLADFGRC 110
           +K  N+++D     L+L D+G  
Sbjct: 155 VKPHNVMIDHEHRKLRLIDWGLA 177

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 8e-08
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 43  GKELFGHYRSITN--DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGS 100
           G  L+ H   I    +   ++             + +LH   +++RDLK +NI L    +
Sbjct: 87  GSSLYHHLHIIETKFEMIKLIDIARQTAQG----MDYLHAKSIIHRDLKSNNIFLHEDLT 142

Query: 101 LLKLADFG 108
            +K+ DFG
Sbjct: 143 -VKIGDFG 149

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 8e-08
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
             EL  + R I +   +  RF    + +    L +LH  G+++RDLK +NILL+     +
Sbjct: 92  NGELLKYIRKIGSFDETCTRFYTAEIVSA---LEYLHGKGIIHRDLKPENILLNEDMH-I 147

Query: 103 KLADFGRC 110
           ++ DFG  
Sbjct: 148 QITDFGTA 155

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.1 bits (109), Expect = 1e-07
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G                 +  +      G   L +LH H +++RD+K  NILL   G L+
Sbjct: 99  GSASDLLEVHKKPLQEVEIAAVTHGALQG---LAYLHSHNMIHRDVKAGNILLSEPG-LV 154

Query: 103 KLADFG 108
           KL DFG
Sbjct: 155 KLGDFG 160

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 2e-07
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 5/70 (7%)

Query: 43  GKELFGHYRSITND-TNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDA-GGS 100
           G ++F    +   +     +   +  +C     L FLH H + + D++ +NI+      S
Sbjct: 85  GLDIFERINTSAFELNEREIVSYVHQVCEA---LQFLHSHNIGHFDIRPENIIYQTRRSS 141

Query: 101 LLKLADFGRC 110
            +K+ +FG+ 
Sbjct: 142 TIKIIEFGQA 151

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 3e-07
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 40  GSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGG 99
            +  +    + R+        ++  +  L      L ++H  G+ +RD+K  N+LLD   
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS---LAYIHSFGICHRDIKPQNLLLDPDT 159

Query: 100 SLLKLADFGRC 110
           ++LKL DFG  
Sbjct: 160 AVLKLCDFGSA 170

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.5 bits (107), Expect = 3e-07
 Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 57  TNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           +  +L ++   + +    L    +   ++RDL   N L+      +K+ADFG  
Sbjct: 113 SAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHL-VKVADFGLS 162

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 45.4 bits (107), Expect = 3e-07
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 43  GKELFGHYRS--ITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDA-GG 99
           G ELF    +         ++ ++          L  +H H +V+ D+K +NI+ +    
Sbjct: 110 GGELFDRIAAEDYKMSEAEVINYMRQACEG----LKHMHEHSIVHLDIKPENIMCETKKA 165

Query: 100 SLLKLADFGRC 110
           S +K+ DFG  
Sbjct: 166 SSVKIIDFGLA 176

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 3e-07
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 5/70 (7%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGD----ACLTFLHRHGVVYRDLKLDNILLDAG 98
              LF +    T     +++  L             +    +  + +RDLK  NIL+   
Sbjct: 85  HGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 144

Query: 99  GSLLKLADFG 108
           G+   +AD G
Sbjct: 145 GT-CCIADLG 153

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 4e-07
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 43  GKELFGHYRSITND--TNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDA--G 98
           G ELF   +   +   T      ++  +      + +LH   + +RD+K +N+L  +   
Sbjct: 93  GGELFSRIQDRGDQAFTEREASEIMKSIGEA---IQYLHSINIAHRDVKPENLLYTSKRP 149

Query: 99  GSLLKLADFGRC 110
            ++LKL DFG  
Sbjct: 150 NAILKLTDFGFA 161

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 4e-07
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            + ++ R   V+RDL+  NIL+       K+ADFG
Sbjct: 125 GMAYVERMNYVHRDLRAANILVGENLV-CKVADFG 158

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 5e-07
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G ELF H       T    RF    + +    L +LH   VVYRD+KL+N++LD  G  +
Sbjct: 89  GGELFFHLSRERVFTEERARFYGAEIVSA---LEYLHSRDVVYRDIKLENLMLDKDGH-I 144

Query: 103 KLADFGRC 110
           K+ DFG C
Sbjct: 145 KITDFGLC 152

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 2e-04
 Identities = 12/20 (60%), Positives = 17/20 (85%)

Query: 25 KVGLEDFHFIKVLGKGSFGK 44
          KV + DF ++K+LGKG+FGK
Sbjct: 1  KVTMNDFDYLKLLGKGTFGK 20

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 5e-07
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G +L+   ++     + I  FL  +L      L ++H   V++RDLK  N+LL+     L
Sbjct: 94  GADLYKLLKTQHLSNDHICYFLYQILRG----LKYIHSANVLHRDLKPSNLLLNTTCD-L 148

Query: 103 KLADFGRC 110
           K+ DFG  
Sbjct: 149 KICDFGLA 156

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 8e-07
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 43  GKELFGHYRSITNDTNSI-LRFLLLLLCAGDACLTFLHR-----HGVVYRDLKLDNILLD 96
           G +L       T +   +   F+L ++      L   HR     H V++RDLK  N+ LD
Sbjct: 89  GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 148

Query: 97  AGGSLLKLADFG 108
              + +KL DFG
Sbjct: 149 GKQN-VKLGDFG 159

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (102), Expect = 1e-06
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
              +LH   ++YRDLK +N+L+D  G  +++ DFG
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFG 186

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.0 bits (77), Expect = 0.003
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 17 RGSSGGDRKVGLEDFHFIKVLGKGSFGK 44
          +  +       L+ F  IK LG GSFG+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGR 56

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-06
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 26  VGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVY 85
                  F+ +L +    ++LF            + R     +      +   H  GV++
Sbjct: 77  WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA---VRHCHNCGVLH 133

Query: 86  RDLKLDNILLDAGGSLLKLADFG 108
           RD+K +NIL+D     LKL DFG
Sbjct: 134 RDIKDENILIDLNRGELKLIDFG 156

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.3 bits (101), Expect = 2e-06
 Identities = 19/89 (21%), Positives = 27/89 (30%), Gaps = 2/89 (2%)

Query: 20  SGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLH 79
           + GD    L       V               S      S    L +        + +L 
Sbjct: 99  AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAG-MAYLS 157

Query: 80  RHGVVYRDLKLDNILLDAGGSLLKLADFG 108
               V+RDL   N L+      +K+ADFG
Sbjct: 158 ERKFVHRDLATRNCLVGENMV-VKIADFG 185

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 2e-06
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
                     +   T S ++ ++ +L  G   L ++HR+ +++RD+K  N+L+   G  L
Sbjct: 101 HDLAGLLSNVLVKFTLSEIKRVMQMLLNG---LYYIHRNKILHRDMKAANVLITRDGV-L 156

Query: 103 KLADFG 108
           KLADFG
Sbjct: 157 KLADFG 162

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.4 bits (99), Expect = 3e-06
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 49  HYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
             ++    T   L  +L  + AG   + +L     V+RDL   NIL+++     K++DFG
Sbjct: 118 LRQNDGQFTVIQLVGMLRGIAAG---MKYLADMNYVHRDLAARNILVNSNLV-CKVSDFG 173

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 3e-06
 Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 5/82 (6%)

Query: 29  EDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDL 88
           E  + I    +     +       I    N +L     +       + F+     ++RDL
Sbjct: 80  EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG----MAFIEERNYIHRDL 135

Query: 89  KLDNILLDAGGSLLKLADFGRC 110
           +  NIL+    S  K+ADFG  
Sbjct: 136 RAANILVSDTLS-CKIADFGLA 156

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 4e-06
 Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 4/82 (4%)

Query: 27  GLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYR 86
                 +++         ++          T   L      +  G   + FL     ++R
Sbjct: 102 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG---MEFLASRKCIHR 158

Query: 87  DLKLDNILLDAGGSLLKLADFG 108
           DL   NILL      +K+ DFG
Sbjct: 159 DLAARNILLSEKNV-VKICDFG 179

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 5e-06
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
                    +    T S ++  +L+   G   L +LH+H +++RDLK +N+LLD  G  L
Sbjct: 84  TDLEVIIKDNSLVLTPSHIKAYMLMTLQG---LEYLHQHWILHRDLKPNNLLLDENGV-L 139

Query: 103 KLADFGRC 110
           KLADFG  
Sbjct: 140 KLADFGLA 147

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 6e-06
 Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 4/68 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G +L  H +S      S   F    +  G   L FLH  G+VYRDLKLDNILLD  G  +
Sbjct: 87  GGDLMYHIQSCHKFDLSRATFYAAEIILG---LQFLHSKGIVYRDLKLDNILLDKDGH-I 142

Query: 103 KLADFGRC 110
           K+ADFG C
Sbjct: 143 KIADFGMC 150

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 7e-06
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
           G  L        N  +  L    + +  G   + +L    +V+RDL   N+L+      +
Sbjct: 95  GCLLDYVREHKDNIGSQYLLNWCVQIAKG---MNYLEDRRLVHRDLAARNVLVKTPQH-V 150

Query: 103 KLADFG 108
           K+ DFG
Sbjct: 151 KITDFG 156

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 40.6 bits (94), Expect = 1e-05
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%)

Query: 65  LLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAG----GSLLKLADFG 108
            +      A +  +H   +VYRD+K DN L+        +++ + DFG
Sbjct: 104 AMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 151

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 2e-05
 Identities = 13/25 (52%), Positives = 19/25 (76%)

Query: 20 SGGDRKVGLEDFHFIKVLGKGSFGK 44
          +G   KVG+E+F  +KVLG G++GK
Sbjct: 15 TGHAEKVGIENFELLKVLGTGAYGK 39

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 2e-05
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 42  FGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSL 101
            G ELF H       T   ++  +  +      L  LH+ G++YRD+KL+NILLD+ G  
Sbjct: 112 NGGELFTHLSQRERFTEHEVQIYVGEIVLA---LEHLHKLGIIYRDIKLENILLDSNGH- 167

Query: 102 LKLADFGRC 110
           + L DFG  
Sbjct: 168 VVLTDFGLS 176

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 3e-05
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 47  FGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLAD 106
           F   R  + D  S++ +   L  A    L +L     V+RD+   N+L+ +    +KL D
Sbjct: 97  FLQVRKYSLDLASLILYAYQLSTA----LAYLESKRFVHRDIAARNVLVSSNDC-VKLGD 151

Query: 107 FG 108
           FG
Sbjct: 152 FG 153

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 3e-05
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
              L  + RS           L   L   +A + +L  +  V+RDL   N+L+       
Sbjct: 85  KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA-MEYLEGNNFVHRDLAARNVLVSEDNV-A 142

Query: 103 KLADFGRC 110
           K++DFG  
Sbjct: 143 KVSDFGLT 150

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 4e-05
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
            + +L     ++RDL   N L++  G  +K++DFG  
Sbjct: 112 AMEYLESKQFLHRDLAARNCLVNDQGV-VKVSDFGLS 147

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 4e-05
 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 75  LTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           L FLH H VV+RDLK  NIL+ + G  +KLADFG  
Sbjct: 129 LDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFGLA 163

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 4e-05
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 7/71 (9%)

Query: 40  GSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGG 99
           G   K L G    I      +   L  +       + +L     V+RDL   N+LL    
Sbjct: 93  GPLHKFLVGKREEIPVSN--VAELLHQVSMG----MKYLEEKNFVHRDLAARNVLLVNRH 146

Query: 100 SLLKLADFGRC 110
              K++DFG  
Sbjct: 147 Y-AKISDFGLS 156

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 4e-05
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 26  VGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVY 85
           V   D     V        + +    +   D   +  FL  LL      L F H   V++
Sbjct: 69  VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG----LGFCHSRNVLH 124

Query: 86  RDLKLDNILLDAGGSLLKLADFGRC 110
           RDLK  N+L++  G  LKLA+FG  
Sbjct: 125 RDLKPQNLLINRNGE-LKLANFGLA 148

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 5e-05
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 56  DTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
           D   +L F   +       + FL     ++RDL   NILL  G    K+ DFG  
Sbjct: 143 DLEDLLSFSYQVAKG----MAFLASKNCIHRDLAARNILLTHGRI-TKICDFGLA 192

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 8e-05
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 4/85 (4%)

Query: 26  VGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVY 85
           V LE      V      G                 L  + L +C G   + +L    V++
Sbjct: 68  VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG---MAYLEEACVIH 124

Query: 86  RDLKLDNILLDAGGSLLKLADFGRC 110
           RDL   N L+      +K++DFG  
Sbjct: 125 RDLAARNCLVGENQV-IKVSDFGMT 148

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 9e-05
 Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLL 102
              L  + +   +  +  +  L+  +  G   + +L     V+RDL   N+LL       
Sbjct: 91  LGPLNKYLQQNRHVKDKNIIELVHQVSMG---MKYLEESNFVHRDLAARNVLLVTQHY-A 146

Query: 103 KLADFGRC 110
           K++DFG  
Sbjct: 147 KISDFGLS 154

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 37.8 bits (87), Expect = 1e-04
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 6/64 (9%)

Query: 45  ELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKL 104
           EL            +    L ++L      +   +  G+V+ DL   N+L+   G  + +
Sbjct: 90  ELIDAKELYRVRVENPDEVLDMILEE----VAKFYHRGIVHGDLSQYNVLVSEEG--IWI 143

Query: 105 ADFG 108
            DF 
Sbjct: 144 IDFP 147

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 1e-04
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 60  ILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
           ++  L  +                V+RDL   NIL+++     K++DFG
Sbjct: 112 LVGMLRGIAAGMKYL----ANMNYVHRDLAARNILVNSNLV-CKVSDFG 155

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 1e-04
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 5/64 (7%)

Query: 47  FGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLAD 106
           F    +       ++ F L +       + FL     V+RDL   N +LD   + +K+AD
Sbjct: 119 FIRNETHNPTVKDLIGFGLQVAKG----MKFLASKKFVHRDLAARNCMLDEKFT-VKVAD 173

Query: 107 FGRC 110
           FG  
Sbjct: 174 FGLA 177

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            + +L +   ++RDL   NIL+       K+ADFG
Sbjct: 139 GMDYLSQKQFIHRDLAARNILVGENYV-AKIADFG 172

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 3e-04
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
            + +L     ++RDL   N+LL      +K+ DFG  
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLM 158

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (76), Expect = 0.003
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 26 VGLEDFHFIKVLGKGSFGKELFGHYRSITNDT 57
          +G +D   ++ LG GSFG    G + + +  T
Sbjct: 5  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKT 36

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.6 bits (81), Expect = 8e-04
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 6/70 (8%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGG--S 100
             E   ++ S      ++L     ++      + ++H    ++RD+K DN L+  G   +
Sbjct: 88  SLEDLFNFCSRKFSLKTVLLLADQMISR----IEYIHSKNFIHRDVKPDNFLMGLGKKGN 143

Query: 101 LLKLADFGRC 110
           L+ + DFG  
Sbjct: 144 LVYIIDFGLA 153

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.001
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 43  GKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKLDNILLDAGG--- 99
           G ELF       + T       L  +  G   + +LH   + + DLK +NI+L       
Sbjct: 97  GGELFDFLAEKESLTEEEATEFLKQILNG---VYYLHSLQIAHFDLKPENIMLLDRNVPK 153

Query: 100 SLLKLADFGRCAR 112
             +K+ DFG   +
Sbjct: 154 PRIKIIDFGLAHK 166

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.6 bits (78), Expect = 0.002
 Identities = 14/90 (15%), Positives = 27/90 (30%), Gaps = 3/90 (3%)

Query: 31  FHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVYRDLKL 90
              +     G     L   Y         + +    LL   D       R G+++ D+K 
Sbjct: 98  HVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKP 154

Query: 91  DNILLDAGGSLLKLADFGRCARKKIKLFCD 120
           +N+L++   S   L             + +
Sbjct: 155 ENVLMEIVDSPENLIQIKIADLGNACWYDE 184

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.002
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRC 110
            + +L+ +  V+RDL   N ++    + +K+ DFG  
Sbjct: 145 GMAYLNANKFVHRDLAARNCMVAEDFT-VKIGDFGMT 180

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 34.1 bits (77), Expect = 0.002
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 74  CLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFG 108
            + + H   V++RDLK  N+L++  G  LK+ADFG
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGE-LKIADFG 145

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (77), Expect = 0.003
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 26  VGLEDFHFIKVLGKGSFGKELFGHYRSITNDTNSILRFLLLLLCAGDACLTFLHRHGVVY 85
           V   +     V        + F    ++T     +++  L  L  G   L F H H V++
Sbjct: 69  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG---LAFCHSHRVLH 125

Query: 86  RDLKLDNILLDAGGSLLKLADFGRC 110
           RDLK  N+L++  G+ +KLADFG  
Sbjct: 126 RDLKPQNLLINTEGA-IKLADFGLA 149

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	127
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.88
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.88
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.88
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.88
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.88
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.87
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.86
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.86
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.86
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.86
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.86
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.86
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.85
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.85
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.85
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.84
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.84
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.84
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.84
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.83
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.83
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.83
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.83
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.83
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.82
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.82
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.82
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.82
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.82
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.82
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.81
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.81
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.81
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.81
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.81
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.81
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.8
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.8
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.8
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.8
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.8
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.8
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.8
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.79
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.79
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.79
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.79
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.79
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.79
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.79
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.78
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.78
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.78
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.78
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.77
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.76
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.75
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.75
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.73
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.72
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.67
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.64
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.76
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	93.52
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	93.25
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	89.04
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	83.06
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	82.57

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.7e-23  Score=145.52  Aligned_cols=85  Identities=28%  Similarity=0.557  Sum_probs=69.4

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------c--------ccCchhHHHHHHH-----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------I--------TNDTNSILRFLLL-----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~--------~~~~~~~~~~~~~-----------------------   66 (127)
                      ..++|++.+.||+|+||+||+|+++.         +        ......|+.++..                       
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivm   82 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   82 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEE
Confidence            36789999999999999999999975         1        0111244555443                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.+|+                        .|+.|||+++|+||||||+|||++.++. +||+|||+|+.
T Consensus        83 Ey~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~-~KL~DFG~a~~  152 (271)
T d1nvra_          83 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN-LKISDFGLATV  152 (271)
T ss_dssp             ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             eccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCC-EEEccchhhee
Confidence             566655                        8999999999999999999999999998 99999999986

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.9e-23  Score=146.02  Aligned_cols=95  Identities=29%  Similarity=0.518  Sum_probs=74.2

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------cc-------c----CchhHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------IT-------N----DTNSILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~-------~----~~~~~~~~~~~--------------------   66 (127)
                      +.+++|++.+.||+|+||+||+|+++.        ..       .    ....|+.++..                    
T Consensus         3 ~~l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~   82 (263)
T d2j4za1           3 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY   82 (263)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             cchhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEE
Confidence            457899999999999999999999975        00       0    01133444443                    


Q ss_pred             ----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec---Cc
Q psy7471          67 ----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK---KI  115 (127)
Q Consensus        67 ----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~---~~  115 (127)
                          |+.+|+                        .||.|||+++|+||||||+|||++.++. +||+|||+|+..   ..
T Consensus        83 ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~-~kl~DFG~a~~~~~~~~  161 (263)
T d2j4za1          83 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE-LKIADFGWSVHAPSSRR  161 (263)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC-EEECCCCSCSCCCCCCC
T ss_pred             EEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCC-EeecccceeeecCCCcc
Confidence                666655                        8999999999999999999999999998 999999999872   23


Q ss_pred             ccceee
Q psy7471         116 KLFCDL  121 (127)
Q Consensus       116 ~~~~gt  121 (127)
                      ...+||
T Consensus       162 ~~~~Gt  167 (263)
T d2j4za1         162 TTLCGT  167 (263)
T ss_dssp             EETTEE
T ss_pred             cccCCC
Confidence            455665

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.88  E-value=4.2e-24  Score=156.42  Aligned_cols=96  Identities=31%  Similarity=0.500  Sum_probs=72.4

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc------cc--c-------Cc----hhH---HHHH-------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS------IT--N-------DT----NSI---LRFL-------------------   64 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~--~-------~~----~~~---~~~~-------------------   64 (127)
                      +++++|++.++||+|+||.||+|+++.      +.  .       ..    ..+   ..++                   
T Consensus         1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~   80 (364)
T d1omwa3           1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD   80 (364)
T ss_dssp             CCSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred             CCHHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC
Confidence            468999999999999999999999975      00  0       00    011   1111                   


Q ss_pred             -----HHhhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee---
Q psy7471          65 -----LLLLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR---  112 (127)
Q Consensus        65 -----~~~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~---  112 (127)
                           ++|+.+|+                        .||.|||+++|+||||||+|||++.++. +||+|||+|+.   
T Consensus        81 ~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~-iKl~DFGla~~~~~  159 (364)
T d1omwa3          81 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH-VRISDLGLACDFSK  159 (364)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSC-EEECCCTTCEECSS
T ss_pred             EEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCc-EEEeeeceeeecCC
Confidence                 12555555                        8999999999999999999999999999 99999999987   


Q ss_pred             cCcccceeeE
Q psy7471         113 KKIKLFCDLL  122 (127)
Q Consensus       113 ~~~~~~~gt~  122 (127)
                      ......+||.
T Consensus       160 ~~~~~~~GT~  169 (364)
T d1omwa3         160 KKPHASVGTH  169 (364)
T ss_dssp             SCCCSCCSCG
T ss_pred             Cccccccccc
Confidence            2234456653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.2e-23  Score=150.40  Aligned_cols=96  Identities=40%  Similarity=0.779  Sum_probs=75.4

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------cc------cC----chhHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------IT------ND----TNSILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~------~~----~~~~~~~~~~--------------------   66 (127)
                      +.+++|++.+.||+|+||+||+|+++.         +.      ..    ...|..++..                    
T Consensus         2 i~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~   81 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             CchHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccc
Confidence            578999999999999999999999875         00      00    1133334333                    


Q ss_pred             ----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec-----
Q psy7471          67 ----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK-----  113 (127)
Q Consensus        67 ----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~-----  113 (127)
                          |+.+|+                        .|+.|||+++|+||||||+|||++.++. +||+|||+|+..     
T Consensus        82 iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~-vkl~DFG~a~~~~~~~~  160 (337)
T d1o6la_          82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGA  160 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC-EEECCCTTCBCSCCTTC
T ss_pred             cceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCC-EEEeecccccccccCCc
Confidence                666665                        8999999999999999999999999999 999999999862     


Q ss_pred             CcccceeeE
Q psy7471         114 KIKLFCDLL  122 (127)
Q Consensus       114 ~~~~~~gt~  122 (127)
                      ...++|||.
T Consensus       161 ~~~~~~GT~  169 (337)
T d1o6la_         161 TMKTFCGTP  169 (337)
T ss_dssp             CBCCCEECG
T ss_pred             ccccceeCH
Confidence            234567774

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.6e-24  Score=153.28  Aligned_cols=39  Identities=33%  Similarity=0.520  Sum_probs=32.1

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||+|||++.++. +||+|||+|+.
T Consensus       145 ~gl~ylH~~~ivHrDlKp~NILl~~~~~-~Kl~DFGla~~  183 (299)
T d1ywna1         145 KGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARD  183 (299)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECGGGC-EEECC------
T ss_pred             HHHHHHHhCCCcCCcCCccceeECCCCc-EEEccCcchhh
Confidence            7899999999999999999999999998 99999999986

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=7e-23  Score=147.35  Aligned_cols=95  Identities=35%  Similarity=0.626  Sum_probs=74.0

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cc------c----CchhHHHHHHH---------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------IT------N----DTNSILRFLLL---------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~------~----~~~~~~~~~~~---------------------   66 (127)
                      .+++|++.+.||+|+||+||+|+++.         +.      .    ....|..++..                     
T Consensus         2 sl~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   81 (316)
T d1fota_           2 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM   81 (316)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred             chhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeee
Confidence            56899999999999999999999875         00      0    01133334332                     


Q ss_pred             ---hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee--cCccc
Q psy7471          67 ---LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR--KKIKL  117 (127)
Q Consensus        67 ---~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~--~~~~~  117 (127)
                         |+.+|+                        .|+.|||+++|+||||||+|||++.++. +||+|||+|+.  ....+
T Consensus        82 vmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~-vkL~DFG~a~~~~~~~~~  160 (316)
T d1fota_          82 IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH-IKITDFGFAKYVPDVTYT  160 (316)
T ss_dssp             EECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSC-EEECCCSSCEECSSCBCC
T ss_pred             EeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCC-EEEecCccceEecccccc
Confidence               555554                        8899999999999999999999999999 99999999998  33445


Q ss_pred             ceeeE
Q psy7471         118 FCDLL  122 (127)
Q Consensus       118 ~~gt~  122 (127)
                      .+||.
T Consensus       161 ~~Gt~  165 (316)
T d1fota_         161 LCGTP  165 (316)
T ss_dssp             CCSCT
T ss_pred             ccCcc
Confidence            66763

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=1.8e-22  Score=146.99  Aligned_cols=96  Identities=32%  Similarity=0.591  Sum_probs=73.5

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------cc------c-----CchhHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------IT------N-----DTNSILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~------~-----~~~~~~~~~~~--------------------   66 (127)
                      ..+++|++.+.||+|+||+||+|+++.        ..      .     ....|+.++..                    
T Consensus        38 ~~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~  117 (350)
T d1rdqe_          38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccc
Confidence            446899999999999999999999975        00      0     01133344333                    


Q ss_pred             ----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccceec--Ccc
Q psy7471          67 ----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCARK--KIK  116 (127)
Q Consensus        67 ----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~~--~~~  116 (127)
                          |+.+|+                        .||.|||+++|+||||||+|||++.++. +||+|||+|+..  ...
T Consensus       118 ~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~-ikL~DFG~a~~~~~~~~  196 (350)
T d1rdqe_         118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTW  196 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC-EEECCCTTCEECSSCBC
T ss_pred             cccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCC-EEeeeceeeeecccccc
Confidence                344443                        7899999999999999999999999998 999999999983  344


Q ss_pred             cceeeE
Q psy7471         117 LFCDLL  122 (127)
Q Consensus       117 ~~~gt~  122 (127)
                      +++||.
T Consensus       197 ~~~Gt~  202 (350)
T d1rdqe_         197 TLCGTP  202 (350)
T ss_dssp             CCEECG
T ss_pred             cccCcc
Confidence            566663

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=1e-22  Score=144.62  Aligned_cols=90  Identities=21%  Similarity=0.384  Sum_probs=73.4

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc---------cccC------chhHHHHHHH--------------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS---------ITND------TNSILRFLLL--------------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~------~~~~~~~~~~--------------------   66 (127)
                      ..|++..++|++.+.||+|+||+||+|+++.         +..+      ...|+.++..                    
T Consensus        10 ~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (287)
T d1opja_          10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   89 (287)
T ss_dssp             CTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             cccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeE
Confidence            3588999999999999999999999999975         1111      1134444443                    


Q ss_pred             ----hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                          |+.+|+                          .||.|||+++|+||||||+|||++.++. +||+|||+|+.
T Consensus        90 iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~-~Kl~DFG~a~~  164 (287)
T d1opja_          90 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRL  164 (287)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC-EEECCCCCTTT
T ss_pred             EEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCc-EEEccccceee
Confidence                555554                          7999999999999999999999999998 99999999986

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.1e-22  Score=143.91  Aligned_cols=89  Identities=24%  Similarity=0.401  Sum_probs=71.5

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc------cc---cCch------hHHHHHHH---------------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS------IT---NDTN------SILRFLLL---------------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~---~~~~------~~~~~~~~---------------------   66 (127)
                      .|+++.++|++.+.||+|+||+||+|+++.      +.   ....      .|..++..                     
T Consensus         2 dwei~~~~~~~~~~lG~G~fg~Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv   81 (276)
T d1uwha_           2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIV   81 (276)
T ss_dssp             CCBCCTTCCCCCSEEEECSSCEEEEEESSSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEE
T ss_pred             CcccccccEEEEEEEeeCCCcEEEEEEECCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEE
Confidence            578999999999999999999999998776      10   0111      22333322                     


Q ss_pred             --hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                        |+.+|+                         .||.|||+++|+||||||+|||++.++. +||+|||+|+.
T Consensus        82 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~-~Kl~DFGla~~  153 (276)
T d1uwha_          82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT-VKIGDFGLATV  153 (276)
T ss_dssp             EECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSS-EEECCCCCSCC
T ss_pred             EecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCC-EEEccccceee
Confidence              555554                         7999999999999999999999999999 99999999976

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.9e-22  Score=142.52  Aligned_cols=86  Identities=30%  Similarity=0.536  Sum_probs=69.3

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc---------cc-----cC-----chhHHHHHHH--------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS---------IT-----ND-----TNSILRFLLL--------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~-----~~-----~~~~~~~~~~--------------------   66 (127)
                      ...++|++.+.||+|+||+||+|+++.         +.     ..     ...|+.++..                    
T Consensus         5 ~~p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~   84 (288)
T d1uu3a_           5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY   84 (288)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEE
T ss_pred             CCCCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEE
Confidence            344789999999999999999999975         00     00     1134444443                    


Q ss_pred             ----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                          |+.+|+                        .||.|||+++|+||||||+||+++.++. +||+|||+|+.
T Consensus        85 ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~-vkl~DFG~a~~  157 (288)
T d1uu3a_          85 FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKV  157 (288)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCce-EEeccccccee
Confidence                566655                        7999999999999999999999999999 99999999986

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.2e-22  Score=145.03  Aligned_cols=39  Identities=33%  Similarity=0.536  Sum_probs=37.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+||+++.++. +||+|||+|+.
T Consensus       175 ~gl~yLH~~~IiHRDlKp~Nill~~~~~-~Kl~DFGla~~  213 (325)
T d1rjba_         175 KGMEFLEFKSCVHRDLAARNVLVTHGKV-VKICDFGLARD  213 (325)
T ss_dssp             HHHHHHHHTTEEETTCSGGGEEEETTTE-EEECCCGGGSC
T ss_pred             HHHHHHHhCCeeeccCchhccccccCCe-EEEeecccccc
Confidence            6899999999999999999999999998 99999999986

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.1e-22  Score=142.30  Aligned_cols=84  Identities=35%  Similarity=0.557  Sum_probs=69.0

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------c-------ccCchhHHHHHHH------------------------h
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------I-------TNDTNSILRFLLL------------------------L   67 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~-------~~~~~~~~~~~~~------------------------~   67 (127)
                      .+.|++.+.||+|+||+||+|+++.         +       ......|+.++..                        |
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            3569999999999999999999875         1       0111245566554                        5


Q ss_pred             hcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          68 LCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        68 ~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +.+|+                         .||.|||+++|+||||||+|||++.++. +||+|||+|+.
T Consensus        91 ~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~-~Kl~DFG~a~~  159 (288)
T d2jfla1          91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD-IKLADFGVSAK  159 (288)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCC-EEEEechhhhc
Confidence            55554                         8999999999999999999999999998 99999999986

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.6e-22  Score=139.06  Aligned_cols=92  Identities=25%  Similarity=0.429  Sum_probs=74.7

Q ss_pred             CCCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------cccCc------hhHHHHHHH-------------------
Q psy7471          20 SGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITNDT------NSILRFLLL-------------------   66 (127)
Q Consensus        20 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~~------~~~~~~~~~-------------------   66 (127)
                      ....|+++.++|++.+.||+|+||+||+|+++.        +....      ..|..++..                   
T Consensus         4 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~   83 (272)
T d1qpca_           4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY   83 (272)
T ss_dssp             TTCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred             CCCCeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeE
Confidence            456788999999999999999999999999876        11111      133333333                   


Q ss_pred             ----hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                          |+.+|+                          .|+.|||+++|+||||||+||+++.++. +||+|||+|+.
T Consensus        84 iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~-~Kl~DFGla~~  158 (272)
T d1qpca_          84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS-CKIADFGLARL  158 (272)
T ss_dssp             EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC-EEECCCTTCEE
T ss_pred             EEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccc-eeeccccceEE
Confidence                555554                          7899999999999999999999999999 99999999987

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.3e-22  Score=144.71  Aligned_cols=97  Identities=27%  Similarity=0.375  Sum_probs=71.4

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc---------cc--cCchhHHHHHHH---------------------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS---------IT--NDTNSILRFLLL---------------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--~~~~~~~~~~~~---------------------------   66 (127)
                      ++..++|++.+.||+|+||+||+|+++.         +.  ........+..|                           
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~i   81 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI   81 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEE
T ss_pred             CCCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            4567899999999999999999999875         10  111111122222                           


Q ss_pred             ---hhcchh------------------------HHHHHHHH-CCcEecCCCCCCEEEecCCCeEEEEeccccee---cCc
Q psy7471          67 ---LLCAGD------------------------ACLTFLHR-HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR---KKI  115 (127)
Q Consensus        67 ---~~~~g~------------------------~al~~lH~-~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~---~~~  115 (127)
                         |+.+|+                        .||.|||+ ++|+||||||+|||++.++. +||+|||+|+.   ...
T Consensus        82 VmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~-vkl~DFGla~~~~~~~~  160 (322)
T d1s9ja_          82 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSMA  160 (322)
T ss_dssp             EEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCC-EEECCCCCCHHHHHHTC
T ss_pred             EEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCC-EEEeeCCCccccCCCcc
Confidence               555555                        89999997 59999999999999999999 99999999986   334


Q ss_pred             ccceeeE
Q psy7471         116 KLFCDLL  122 (127)
Q Consensus       116 ~~~~gt~  122 (127)
                      .+++||.
T Consensus       161 ~~~~GT~  167 (322)
T d1s9ja_         161 NSFVGTR  167 (322)
T ss_dssp             ---CCSS
T ss_pred             ccccCCc
Confidence            5566663

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.1e-21  Score=139.37  Aligned_cols=97  Identities=24%  Similarity=0.395  Sum_probs=77.2

Q ss_pred             CCCCCCCCCCcccCCCeEEEEEeceeCCceEEEEEEcc--------cccCc------hhHHHHHHH--------------
Q psy7471          15 SGRGSSGGDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------ITNDT------NSILRFLLL--------------   66 (127)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~~------~~~~~~~~~--------------   66 (127)
                      ...+..+..|+++.++|++.+.||+|+||+||+|+++.        +....      ..|..++..              
T Consensus         3 ~~~~~~~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~   82 (285)
T d1fmka3           3 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS   82 (285)
T ss_dssp             CCSSSSTTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             CCCCCCCcceEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEe
Confidence            44556678899999999999999999999999999876        11111      133333332              


Q ss_pred             ---------hhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEecccce
Q psy7471          67 ---------LLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCA  111 (127)
Q Consensus        67 ---------~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~  111 (127)
                               |+.+|+                          .|+.|||.++|+||||||+|||++.++. +||+|||+++
T Consensus        83 ~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~-~kl~DfGla~  161 (285)
T d1fmka3          83 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-CKVADFGLAR  161 (285)
T ss_dssp             SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC-EEECCCCTTC
T ss_pred             cCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCc-EEEcccchhh
Confidence                     555554                          7999999999999999999999999998 9999999997


Q ss_pred             e
Q psy7471         112 R  112 (127)
Q Consensus       112 ~  112 (127)
                      .
T Consensus       162 ~  162 (285)
T d1fmka3         162 L  162 (285)
T ss_dssp             -
T ss_pred             h
Confidence            5

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.8e-22  Score=142.20  Aligned_cols=84  Identities=32%  Similarity=0.530  Sum_probs=68.1

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cc--cC-----chhHHHHHHH------------------------h
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------IT--ND-----TNSILRFLLL------------------------L   67 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--~~-----~~~~~~~~~~------------------------~   67 (127)
                      .++|++.+.||+|+||+||+|+++.         +.  ..     ...|..++..                        |
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            3579999999999999999999875         10  00     1134444443                        6


Q ss_pred             hcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          68 LCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        68 ~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |.+|+                       .||.|||+++|+||||||+|||++.++. +||+|||+|+.
T Consensus        99 ~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~-vkl~DFG~a~~  165 (293)
T d1yhwa1          99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQ  165 (293)
T ss_dssp             CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             cCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCc-Eeeccchhhee
Confidence            66665                       8999999999999999999999999998 99999999987

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.9e-23  Score=146.39  Aligned_cols=84  Identities=32%  Similarity=0.468  Sum_probs=60.6

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cc--cCch-------hHH--------------------------HH
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------IT--NDTN-------SIL--------------------------RF   63 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--~~~~-------~~~--------------------------~~   63 (127)
                      .++|++.+.||+|+||+||+|+++.         +.  ...+       .|.                          ++
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            4789999999999999999999975         00  0011       111                          22


Q ss_pred             HHHhhcchh----------------------------HHHHHHHHCC-----cEecCCCCCCEEEecCCCeEEEEecccc
Q psy7471          64 LLLLLCAGD----------------------------ACLTFLHRHG-----VVYRDLKLDNILLDAGGSLLKLADFGRC  110 (127)
Q Consensus        64 ~~~~~~~g~----------------------------~al~~lH~~~-----iih~dlk~~nil~~~~~~~~kl~dfg~a  110 (127)
                      +++||.+|+                            .||.|||+++     |+||||||+|||++.++. +||+|||+|
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~-vkl~DFG~a  161 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLA  161 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSC-EEECCHHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCc-EEEeeccce
Confidence            223565554                            7899999865     999999999999999999 999999999


Q ss_pred             ee
Q psy7471         111 AR  112 (127)
Q Consensus       111 ~~  112 (127)
                      +.
T Consensus       162 ~~  163 (269)
T d2java1         162 RI  163 (269)
T ss_dssp             HH
T ss_pred             ee
Confidence            86

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=7.3e-22  Score=141.63  Aligned_cols=91  Identities=31%  Similarity=0.491  Sum_probs=70.1

Q ss_pred             CeEEEEEeceeCCceEEEEEEcc---------cccC---c-------hhHHHHHHH------------------------
Q psy7471          30 DFHFIKVLGKGSFGKELFGHYRS---------ITND---T-------NSILRFLLL------------------------   66 (127)
Q Consensus        30 ~~~~~~~lg~G~fg~V~~~~~~~---------~~~~---~-------~~~~~~~~~------------------------   66 (127)
                      .|+..+.||+|+||+||+|+++.         +...   .       ..|+.++..                        
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            49999999999999999999875         1110   1       123333332                        


Q ss_pred             hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee-cCcccceee
Q psy7471          67 LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR-KKIKLFCDL  121 (127)
Q Consensus        67 ~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~-~~~~~~~gt  121 (127)
                      ||.+|+                        .||.|||+++|+||||||+|||++.++. +||+|||+|+. ......+||
T Consensus        96 ~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~-~Kl~DFG~a~~~~~~~~~~GT  174 (309)
T d1u5ra_          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL-VKLGDFGSASIMAPANSFVGT  174 (309)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTE-EEECCCTTCBSSSSBCCCCSC
T ss_pred             ecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCC-EEEeecccccccCCCCccccC
Confidence            555554                        7999999999999999999999999998 99999999987 334455665

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.4e-22  Score=145.94  Aligned_cols=84  Identities=52%  Similarity=0.885  Sum_probs=67.2

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cc-----cCc-----hhHHHHHHH----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------IT-----NDT-----NSILRFLLL----------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~-----~~~-----~~~~~~~~~----------------------   66 (127)
                      +++|++.++||+|+||+||+|+++.         +.     ...     ..+..++..                      
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yi   80 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   80 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeE
Confidence            5789999999999999999999976         10     011     122222221                      


Q ss_pred             ---hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                         |+.+|+                        .||.|||+++|+||||||+|||++..+. +||+|||+++.
T Consensus        81 vmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~-~kl~DFG~a~~  152 (320)
T d1xjda_          81 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH-IKIADFGMCKE  152 (320)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC-EEECCCTTCBC
T ss_pred             EEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCc-eeccccchhhh
Confidence               566655                        8999999999999999999999999999 99999999986

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=3.1e-21  Score=137.63  Aligned_cols=88  Identities=25%  Similarity=0.411  Sum_probs=64.6

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc------------ccc--Cch------hHHHHHHH-----------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS------------ITN--DTN------SILRFLLL-----------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~~--~~~------~~~~~~~~-----------------   66 (127)
                      .++..++|++.++||+|+||+||+|+++.            +..  ...      .|..++..                 
T Consensus        21 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  100 (299)
T d1jpaa_          21 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKST  100 (299)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             hhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence            45677899999999999999999999853            100  111      22222222                 


Q ss_pred             -------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+.+|+                         .||.|||+++|+||||||+|||++.++. +||+|||+|+.
T Consensus       101 ~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~-~Kl~DFGla~~  177 (299)
T d1jpaa_         101 PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLV-CKVSDFGLSRF  177 (299)
T ss_dssp             SCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC-EEECCC-----
T ss_pred             EEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCc-EEECCcccceE
Confidence                   555554                         7899999999999999999999999998 99999999986

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.3e-21  Score=137.73  Aligned_cols=89  Identities=27%  Similarity=0.445  Sum_probs=64.7

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc------------ccc-Cch-------hHHHHHHH----------------
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS------------ITN-DTN-------SILRFLLL----------------   66 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~~-~~~-------~~~~~~~~----------------   66 (127)
                      .|+++.++|++.+.||+|+||+||+|++..            +.. ..+       .|..++..                
T Consensus         1 ~~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~   80 (273)
T d1mp8a_           1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN   80 (273)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             CCCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            378888999999999999999999998854            000 111       22222222                


Q ss_pred             -------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+.+|+                         .|+.|||+++++||||||+||+++.++. +||+|||+|+.
T Consensus        81 ~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~-~Kl~DfG~a~~  157 (273)
T d1mp8a_          81 PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRY  157 (273)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE-EEECC------
T ss_pred             eEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCc-EEEccchhhee
Confidence                   444443                         7899999999999999999999999998 99999999986

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.83  E-value=2e-22  Score=146.84  Aligned_cols=86  Identities=24%  Similarity=0.446  Sum_probs=66.8

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cccCc-------hhHHHHHHH------------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITNDT-------NSILRFLLL------------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~~-------~~~~~~~~~------------------------   66 (127)
                      ..+.|++.+.||+|+||+||+|+++.         +....       ..|+.++..                        
T Consensus        27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE  106 (352)
T d1koba_          27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  106 (352)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            35789999999999999999999875         11111       123333332                        


Q ss_pred             hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEe--cCCCeEEEEecccceec
Q psy7471          67 LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLD--AGGSLLKLADFGRCARK  113 (127)
Q Consensus        67 ~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~--~~~~~~kl~dfg~a~~~  113 (127)
                      ||.+|+                         .||.|||+++|+||||||+|||++  ..+. +||+|||+|+..
T Consensus       107 ~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~-vkL~DFGla~~~  179 (352)
T d1koba_         107 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS-VKIIDFGLATKL  179 (352)
T ss_dssp             CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCC-EEECCCTTCEEC
T ss_pred             cCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCe-EEEeecccceec
Confidence            566554                         899999999999999999999998  4566 999999999873

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=5.7e-21  Score=135.13  Aligned_cols=88  Identities=24%  Similarity=0.333  Sum_probs=65.6

Q ss_pred             CcccCCCeEEEEEeceeCCceEEEEEEcc-------------cc--cCch------hHHHHHHH----------------
Q psy7471          24 RKVGLEDFHFIKVLGKGSFGKELFGHYRS-------------IT--NDTN------SILRFLLL----------------   66 (127)
Q Consensus        24 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------~~--~~~~------~~~~~~~~----------------   66 (127)
                      .++..+.|++.++||+|+||+||+|.++.             +.  ....      .|..++..                
T Consensus         2 ~ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~   81 (283)
T d1mqba_           2 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY   81 (283)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             CcCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecC
Confidence            35677889999999999999999998764             10  1111      23333332                


Q ss_pred             --------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 --------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 --------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                              |+.+++                         .|+.|||+++|+||||||.|||++.++. +||+|||+++.
T Consensus        82 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~-~Kl~DFGla~~  159 (283)
T d1mqba_          82 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV-CKVSDFGLSRV  159 (283)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC-EEECCCCC---
T ss_pred             CceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCe-EEEcccchhhc
Confidence                    333322                         7899999999999999999999999999 99999999986

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.83  E-value=3.8e-21  Score=139.96  Aligned_cols=85  Identities=27%  Similarity=0.450  Sum_probs=67.2

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------cccCc-------hhHHHHHHH------------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITNDT-------NSILRFLLL------------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~~-------~~~~~~~~~------------------------   66 (127)
                      .+++|++.+.||+|+||+||+|+++.         +....       ..|+.++..                        
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE  103 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  103 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            36799999999999999999999975         11111       134444433                        


Q ss_pred             hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEec--CCCeEEEEeccccee
Q psy7471          67 LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDA--GGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~--~~~~~kl~dfg~a~~  112 (127)
                      |+.+|+                         .||.|||+++|+||||||+|||++.  ++. +||+|||+|+.
T Consensus       104 ~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~-vkL~DFG~a~~  175 (350)
T d1koaa2         104 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAH  175 (350)
T ss_dssp             CCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCC-EEECCCTTCEE
T ss_pred             cCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCe-EEEeecchhee
Confidence            555554                         8999999999999999999999964  466 99999999987

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.2e-20  Score=132.87  Aligned_cols=95  Identities=28%  Similarity=0.318  Sum_probs=70.8

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cc-------------cCchhHHHHHHH-------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------IT-------------NDTNSILRFLLL-------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~-------------~~~~~~~~~~~~-------------------   66 (127)
                      .++|++.+.||+|+||+||+|+++.         +.             .....|..++..                   
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            3679999999999999999999975         00             012356666654                   


Q ss_pred             -------hhcch-h------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee--
Q psy7471          67 -------LLCAG-D------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR--  112 (127)
Q Consensus        67 -------~~~~g-~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~--  112 (127)
                             |+.++ +                        .||.|||+++|+||||||+||+++.+...+||+|||+|+.  
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~  162 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK  162 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             eEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecc
Confidence                   22211 1                        7999999999999999999999996643399999999986  


Q ss_pred             -cCcccceeeE
Q psy7471         113 -KKIKLFCDLL  122 (127)
Q Consensus       113 -~~~~~~~gt~  122 (127)
                       ....+++||.
T Consensus       163 ~~~~~~~~GT~  173 (273)
T d1xwsa_         163 DTVYTDFDGTR  173 (273)
T ss_dssp             SSCBCCCCSCG
T ss_pred             cccccccccCC
Confidence             2234556653

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3.6e-21  Score=136.90  Aligned_cols=84  Identities=31%  Similarity=0.508  Sum_probs=66.6

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------ccc---------CchhHHHHHHH-----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITN---------DTNSILRFLLL-----------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~---------~~~~~~~~~~~-----------------------   66 (127)
                      +++|++.+.||+|+||+||+|+++.         +..         ....|+.++..                       
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~   80 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF   80 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEE
Confidence            5899999999999999999999975         100         01134444443                       


Q ss_pred             -hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       |+.++.                         .||.|||+++|+||||||+||+++.++. +||+|||+|+.
T Consensus        81 e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~-~kl~DFG~a~~  151 (298)
T d1gz8a_          81 EFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA-IKLADFGLARA  151 (298)
T ss_dssp             ECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC-EEECSTTHHHH
T ss_pred             eecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCc-ceeccCCccee
Confidence             333322                         8999999999999999999999999998 99999999976

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.82  E-value=1.1e-20  Score=133.57  Aligned_cols=84  Identities=31%  Similarity=0.422  Sum_probs=67.6

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------ccc------C----------chhHHHHHHH----------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITN------D----------TNSILRFLLL----------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~------~----------~~~~~~~~~~----------------   66 (127)
                      .++|++.+.||+|+||+||+|+++.         +..      .          ...|..++..                
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            4789999999999999999999865         100      0          1123333333                


Q ss_pred             ---------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                               |+.+|+                        .||.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~-~kl~DFG~a~~  159 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQ  159 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             CcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCC-eEEccchheeE
Confidence                     555554                        8999999999999999999999999999 99999999987

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.82  E-value=1.3e-20  Score=135.33  Aligned_cols=86  Identities=21%  Similarity=0.424  Sum_probs=67.4

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------ccc----CchhHHHHHHH---------------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------ITN----DTNSILRFLLL---------------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~----~~~~~~~~~~~---------------------------   66 (127)
                      ..++|++.+.||+|+||+||+|+++.         +..    ....|+.++..                           
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e  112 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  112 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence            44789999999999999999999975         111    11245555544                           


Q ss_pred             hhcchh---------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD---------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~---------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      |+.+++                     .||.|||+++|+||||||+|||++.++..+||+|||+|+.
T Consensus       113 ~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~  179 (328)
T d3bqca1         113 HVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF  179 (328)
T ss_dssp             CCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEE
T ss_pred             ecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeeccccccee
Confidence            333333                     8999999999999999999999997664489999999987

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=4.3e-21  Score=137.44  Aligned_cols=94  Identities=26%  Similarity=0.504  Sum_probs=62.7

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cc--------cCchhHHHHHHH------------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------IT--------NDTNSILRFLLL------------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~--------~~~~~~~~~~~~------------------------   66 (127)
                      .+.|++.+.||+|+||+||+|+++.         +.        .....|+.++..                        
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            4669999999999999999999875         10        011245555544                        


Q ss_pred             hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEecccceec----Cc
Q psy7471          67 LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCARK----KI  115 (127)
Q Consensus        67 ~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~~----~~  115 (127)
                      ||.+|+                        .|+.|||+++|+||||||+||++..   ++. +||+|||+|+..    ..
T Consensus        88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~-vkl~DFG~a~~~~~~~~~  166 (307)
T d1a06a_          88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVL  166 (307)
T ss_dssp             CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCC-EEECCC------------
T ss_pred             ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCce-EEEeccceeEEccCCCee
Confidence            666665                        8999999999999999999999953   566 999999999862    23


Q ss_pred             ccceeeE
Q psy7471         116 KLFCDLL  122 (127)
Q Consensus       116 ~~~~gt~  122 (127)
                      .+.+||.
T Consensus       167 ~~~~GT~  173 (307)
T d1a06a_         167 STACGTP  173 (307)
T ss_dssp             ------C
T ss_pred             eeeeeCc
Confidence            4556664

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=4e-21  Score=136.93  Aligned_cols=39  Identities=33%  Similarity=0.479  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||+|||++.+.. +||+|||+|+.
T Consensus       151 ~gl~ylH~~~ivHrDlKp~NILld~~~~-~Kl~DFGls~~  189 (301)
T d1lufa_         151 AGMAYLSERKFVHRDLATRNCLVGENMV-VKIADFGLSRN  189 (301)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECGGGC-EEECCCSCHHH
T ss_pred             HHhhhcccCCeEeeEEcccceEECCCCc-EEEccchhhee
Confidence            7899999999999999999999999998 99999999985

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2e-20  Score=135.76  Aligned_cols=83  Identities=30%  Similarity=0.500  Sum_probs=66.0

Q ss_pred             CeEEEEEeceeCCceEEEEEEcc---------c---ccCchhHHHHHHH------------------------------h
Q psy7471          30 DFHFIKVLGKGSFGKELFGHYRS---------I---TNDTNSILRFLLL------------------------------L   67 (127)
Q Consensus        30 ~~~~~~~lg~G~fg~V~~~~~~~---------~---~~~~~~~~~~~~~------------------------------~   67 (127)
                      +|+..++||+|+||+||+|+++.         +   ......|+.++..                              |
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey  100 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  100 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEEC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEec
Confidence            69999999999999999999975         1   1122355665554                              3


Q ss_pred             hcchh---------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          68 LCAGD---------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        68 ~~~g~---------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +.++.                           .||.|||+++|+||||||+|||++.++..+||+|||+++.
T Consensus       101 ~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~  172 (350)
T d1q5ka_         101 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  172 (350)
T ss_dssp             CSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred             cCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhh
Confidence            33321                           8999999999999999999999997763399999999987

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.2e-20  Score=132.24  Aligned_cols=86  Identities=22%  Similarity=0.420  Sum_probs=65.0

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc--------cccCc------hhHHHHHHH------------------------h
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS--------ITNDT------NSILRFLLL------------------------L   67 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~~------~~~~~~~~~------------------------~   67 (127)
                      ++.++|++.+.||+|+||.||+|++++        +....      ..|..++..                        |
T Consensus         2 idp~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~   81 (263)
T d1sm2a_           2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   81 (263)
T ss_dssp             BCCSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             CChHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence            355789999999999999999999875        11111      133333333                        5


Q ss_pred             hcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          68 LCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        68 ~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +.+|+                         .|+.|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus        82 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~-~Kl~DFGla~~  150 (263)
T d1sm2a_          82 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-IKVSDFGMTRF  150 (263)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGC-EEECSCC----
T ss_pred             cCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCC-eEecccchhee
Confidence            55554                         7899999999999999999999999999 99999999986

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=7.9e-21  Score=133.85  Aligned_cols=49  Identities=35%  Similarity=0.506  Sum_probs=40.9

Q ss_pred             HHHHHHHHCC--cEecCCCCCCEEEec-CCCeEEEEeccccee---cCcccceeeE
Q psy7471          73 ACLTFLHRHG--VVYRDLKLDNILLDA-GGSLLKLADFGRCAR---KKIKLFCDLL  122 (127)
Q Consensus        73 ~al~~lH~~~--iih~dlk~~nil~~~-~~~~~kl~dfg~a~~---~~~~~~~gt~  122 (127)
                      .|+.|||+++  |+||||||+|||++. ++. +||+|||+|+.   ....+.+||.
T Consensus       123 ~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~-~Kl~DFGla~~~~~~~~~~~~GT~  177 (270)
T d1t4ha_         123 KGLQFLHTRTPPIIHRDLKCDNIFITGPTGS-VKIGDLGLATLKRASFAKAVIGTP  177 (270)
T ss_dssp             HHHHHHHTSSSCCCCSCCCGGGEEESSTTSC-EEECCTTGGGGCCTTSBEESCSSC
T ss_pred             HHHHHHHHCCCCEEeCCcChhhceeeCCCCC-EEEeecCcceeccCCccCCcccCc
Confidence            7999999998  999999999999975 677 99999999986   2234556664

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.8e-20  Score=132.22  Aligned_cols=84  Identities=27%  Similarity=0.477  Sum_probs=65.8

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------c--cc-Cc------hhHHHHHHH-----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------I--TN-DT------NSILRFLLL-----------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~--~~-~~------~~~~~~~~~-----------------------   66 (127)
                      +++|++.+.||+|+||+||+|+++.         +  .. ..      ..|+.++..                       
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~   80 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEe
Confidence            5789999999999999999999975         1  01 11      133333332                       


Q ss_pred             -hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                       ++.+++                        .||.|||+++|+||||||+|||++.+.. +|++|||.++.
T Consensus        81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~-~kl~DFG~a~~  150 (292)
T d1unla_          81 EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE-LKLANFGLARA  150 (292)
T ss_dssp             ECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC-EEECCCTTCEE
T ss_pred             eeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCc-eeeeecchhhc
Confidence             222221                        7899999999999999999999999998 99999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.6e-20  Score=132.40  Aligned_cols=90  Identities=24%  Similarity=0.406  Sum_probs=70.2

Q ss_pred             CCCcccCCCeEEEEEeceeCCceEEEEEEcc--------------ccc--Cch------hHHHHHHH-------------
Q psy7471          22 GDRKVGLEDFHFIKVLGKGSFGKELFGHYRS--------------ITN--DTN------SILRFLLL-------------   66 (127)
Q Consensus        22 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~--~~~------~~~~~~~~-------------   66 (127)
                      ..|++..++|++.+.||+|+||+||+|+++.              +..  ...      .|..++..             
T Consensus        13 ~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~   92 (308)
T d1p4oa_          13 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV   92 (308)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             cceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEE
Confidence            3588999999999999999999999998853              111  111      22222222             


Q ss_pred             -----------hhcchh----------------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCe
Q psy7471          67 -----------LLCAGD----------------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSL  101 (127)
Q Consensus        67 -----------~~~~g~----------------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~  101 (127)
                                 |+.+|+                                  .|+.|||.++|+||||||.|||++.+.. 
T Consensus        93 ~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~-  171 (308)
T d1p4oa_          93 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT-  171 (308)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC-
T ss_pred             ecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCce-
Confidence                       444443                                  7899999999999999999999999998 


Q ss_pred             EEEEeccccee
Q psy7471         102 LKLADFGRCAR  112 (127)
Q Consensus       102 ~kl~dfg~a~~  112 (127)
                      +||+|||+|+.
T Consensus       172 ~Kl~DFGla~~  182 (308)
T d1p4oa_         172 VKIGDFGMTRD  182 (308)
T ss_dssp             EEECCTTCCCG
T ss_pred             EEEeeccccee
Confidence            99999999986

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1e-19  Score=130.81  Aligned_cols=86  Identities=24%  Similarity=0.430  Sum_probs=67.4

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cccCc------hhHHHHHHH------------------------hh
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITNDT------NSILRFLLL------------------------LL   68 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~~~------~~~~~~~~~------------------------~~   68 (127)
                      .++|++.+.||+|+||+||+|+++.         +....      ..|+.++..                        ||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            5789999999999999999999975         11111      134444433                        55


Q ss_pred             cchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCC--CeEEEEecccceecC
Q psy7471          69 CAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGG--SLLKLADFGRCARKK  114 (127)
Q Consensus        69 ~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~--~~~kl~dfg~a~~~~  114 (127)
                      .+|+                         .|+.|||+++|+||||||+||+++.+.  . +||+|||+++...
T Consensus        84 ~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~-ikl~DFG~~~~~~  155 (321)
T d1tkia_          84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSST-IKIIEFGQARQLK  155 (321)
T ss_dssp             CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCC-EEECCCTTCEECC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceE-EEEcccchhhccc
Confidence            5554                         899999999999999999999998543  5 9999999998733

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.6e-20  Score=134.64  Aligned_cols=86  Identities=27%  Similarity=0.414  Sum_probs=66.2

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc-------------cc--cCc------hhHHHHHHH------------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS-------------IT--NDT------NSILRFLLL------------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~-------------~~--~~~------~~~~~~~~~------------------   66 (127)
                      +..++|++.++||+|+||+||+|++..             +.  ...      ..|..++..                  
T Consensus         6 ~k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~   85 (317)
T d1xkka_           6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV   85 (317)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSE
T ss_pred             CCHHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCe
Confidence            445789999999999999999998854             00  001      133444433                  


Q ss_pred             -----hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.+|+                         .||.|||+++|+||||||+||+++.++. +||+|||+|+.
T Consensus        86 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~-~kl~DFGla~~  160 (317)
T d1xkka_          86 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKL  160 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE-EEECCCSHHHH
T ss_pred             eEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCC-eEeecccccee
Confidence                 222222                         7999999999999999999999999998 99999999986

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.9e-21  Score=135.58  Aligned_cols=89  Identities=26%  Similarity=0.553  Sum_probs=69.6

Q ss_pred             CCcccCCCeEEEEEeceeCCceEEEEEEcc-------cccCc-----hhHHH-------------------------HHH
Q psy7471          23 DRKVGLEDFHFIKVLGKGSFGKELFGHYRS-------ITNDT-----NSILR-------------------------FLL   65 (127)
Q Consensus        23 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~~-----~~~~~-------------------------~~~   65 (127)
                      .|++++++|++.+.||+|+||.||+|++++       +..+.     ..|+.                         +++
T Consensus         1 ~w~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~   80 (262)
T d1byga_           1 GWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   80 (262)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             CCccCHHHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEE
Confidence            488999999999999999999999999987       11110     12222                         223


Q ss_pred             Hhhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          66 LLLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        66 ~~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +|+.+|+                          .|+.|||+++|+||||||.||+++.++. +|++|||+++.
T Consensus        81 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~-~kl~dfg~s~~  152 (262)
T d1byga_          81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV-AKVSDFGLTKE  152 (262)
T ss_dssp             CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSC-EEECCCCC---
T ss_pred             eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCC-Eeeccccccee
Confidence            3555554                          7999999999999999999999999999 99999999987

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3.7e-20  Score=131.42  Aligned_cols=85  Identities=26%  Similarity=0.348  Sum_probs=67.6

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------cc-----c--------CchhHHHHHHH-------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------IT-----N--------DTNSILRFLLL-------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~-----~--------~~~~~~~~~~~-------------------   66 (127)
                      -+.|++.+.||+|+||+||+|+++.         +.     .        ....|+.++..                   
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            3679999999999999999999975         00     0        01245555554                   


Q ss_pred             -----hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCC---eEEEEeccccee
Q psy7471          67 -----LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGS---LLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~---~~kl~dfg~a~~  112 (127)
                           ||.+|+                        .||.|||+++|+||||||+||+++.++.   .+|++|||+|+.
T Consensus        89 ~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~  166 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  166 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhh
Confidence                 566665                        8999999999999999999999987652   299999999987

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=5.6e-20  Score=130.62  Aligned_cols=39  Identities=54%  Similarity=0.777  Sum_probs=37.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++..+. +||+|||+++.
T Consensus       127 ~aL~yLH~~~ivHrDiKp~NILi~~~~~-~kl~dfg~~~~  165 (305)
T d1blxa_         127 RGLDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFGLARI  165 (305)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECTTCC-EEECSCCSCCC
T ss_pred             HHHHHHHhCCEEecCCCccEEEEcCCCC-eeecchhhhhh
Confidence            8999999999999999999999999999 99999999886

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.80  E-value=2.1e-20  Score=132.01  Aligned_cols=84  Identities=30%  Similarity=0.454  Sum_probs=65.3

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc--------ccc---C------chhHHHHHHH------------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS--------ITN---D------TNSILRFLLL------------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~---~------~~~~~~~~~~------------------------   66 (127)
                      +++|++.++||+|+||+||+|+++.        +..   .      ...|+.++..                        
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e   80 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CCCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence            5799999999999999999999875        100   0      1133333332                        


Q ss_pred             hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ++.++.                        .||.|||+++|+||||||+|||++.++. +|++|||.+..
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~-~kl~DfG~a~~  149 (286)
T d1ob3a_          81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE-LKIADFGLARA  149 (286)
T ss_dssp             CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC-EEECCTTHHHH
T ss_pred             eehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCC-EEeccccccee
Confidence            222221                        7899999999999999999999999999 99999999876

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.7e-21  Score=137.78  Aligned_cols=39  Identities=28%  Similarity=0.507  Sum_probs=37.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.++. +||+|||+++.
T Consensus       146 ~al~ylH~~~ivHrDiKp~NiLl~~~~~-~kl~dfg~~~~  184 (299)
T d1fgka_         146 RGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARD  184 (299)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECTTCC-EEECSTTCCCC
T ss_pred             HHHHHhhhCCEEeeeecccceeecCCCC-eEeccchhhcc
Confidence            7899999999999999999999999999 99999999986

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3.5e-20  Score=134.22  Aligned_cols=83  Identities=28%  Similarity=0.443  Sum_probs=63.1

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc---------ccc--Cc------hhHHHHHHH-------------------------
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS---------ITN--DT------NSILRFLLL-------------------------   66 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~~--~~------~~~~~~~~~-------------------------   66 (127)
                      ++|++.+.||+|+||+||+|+++.         +..  ..      ..|+.++..                         
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            569999999999999999999875         111  11      134444444                         


Q ss_pred             ---hhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ---LLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ---~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                         ++.+|+                       .||.|||+++|+||||||+|||++.++. +||+|||+++.
T Consensus        88 l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~-~kl~DfG~a~~  158 (345)
T d1pmea_          88 LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARV  158 (345)
T ss_dssp             EEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             EEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCC-EEEcccCceee
Confidence               333333                       7999999999999999999999999998 99999999986

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3.7e-20  Score=131.55  Aligned_cols=39  Identities=51%  Similarity=0.807  Sum_probs=37.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .||.|||+++|+||||||+|||++.++. +||+|||+|+.
T Consensus       111 ~aL~~lH~~~iiHrDiKp~NIli~~~~~-~KL~DFG~a~~  149 (299)
T d1ua2a_         111 QGLEYLHQHWILHRDLKPNNLLLDENGV-LKLADFGLAKS  149 (299)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECTTCC-EEECCCGGGST
T ss_pred             HHHHHhhccceecccCCcceEEecCCCc-cccccCccccc
Confidence            8999999999999999999999999999 99999999976

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=4.5e-20  Score=130.83  Aligned_cols=87  Identities=24%  Similarity=0.400  Sum_probs=67.5

Q ss_pred             cccCCCeEEEEE-eceeCCceEEEEEEcc-----------ccc--Cch------hHHHHHHH------------------
Q psy7471          25 KVGLEDFHFIKV-LGKGSFGKELFGHYRS-----------ITN--DTN------SILRFLLL------------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~-lg~G~fg~V~~~~~~~-----------~~~--~~~------~~~~~~~~------------------   66 (127)
                      -+..++|.+.+. ||+|+||+||+|.++.           +..  ...      .|..++..                  
T Consensus         4 ~l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~   83 (285)
T d1u59a_           4 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL   83 (285)
T ss_dssp             BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSE
T ss_pred             eecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeE
Confidence            456678999885 9999999999998753           111  111      23333333                  


Q ss_pred             -----hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -----LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -----~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                           |+.+|+                         .||.|||+++|+||||||+||+++.++. +||+|||+|+.
T Consensus        84 ~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~-~Kl~DFGla~~  158 (285)
T d1u59a_          84 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY-AKISDFGLSKA  158 (285)
T ss_dssp             EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTE-EEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCc-eeeccchhhhc
Confidence                 555554                         8999999999999999999999999998 99999999987

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1e-19  Score=130.18  Aligned_cols=39  Identities=36%  Similarity=0.549  Sum_probs=37.5

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++++||||||+||+++..+. ++++|||+++.
T Consensus       156 ~gl~~LH~~~ivHrDLKp~NIl~~~~~~-~ki~DfG~~~~  194 (311)
T d1t46a_         156 KGMAFLASKNCIHRDLAARNILLTHGRI-TKICDFGLARD  194 (311)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEEETTTE-EEECCCGGGSC
T ss_pred             HHHHHHHhCCeeecccccccccccccCc-ccccccchhee
Confidence            7899999999999999999999999988 99999999986

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.4e-19  Score=130.85  Aligned_cols=86  Identities=27%  Similarity=0.450  Sum_probs=66.0

Q ss_pred             ccCCCeEEEE-EeceeCCceEEEEEEcc---------cccC--chhHHHH-----------------------------H
Q psy7471          26 VGLEDFHFIK-VLGKGSFGKELFGHYRS---------ITND--TNSILRF-----------------------------L   64 (127)
Q Consensus        26 ~~~~~~~~~~-~lg~G~fg~V~~~~~~~---------~~~~--~~~~~~~-----------------------------~   64 (127)
                      ..+++|++.. +||+|+||+||+|+++.         +...  ...|+.+                             +
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~iv   87 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV   87 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEE
Confidence            4468899875 69999999999999875         1111  1133333                             2


Q ss_pred             HHhhcchh--------------------------HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          65 LLLLCAGD--------------------------ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        65 ~~~~~~g~--------------------------~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                      ++||.+|+                          .||.|||+++|+||||||+|||++.   .+. +||+|||+|+.
T Consensus        88 mEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~-~Kl~DFG~a~~  163 (335)
T d2ozaa1          88 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI-LKLTDFGFAKE  163 (335)
T ss_dssp             EECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCC-EEECCCTTCEE
T ss_pred             EECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccc-ccccccceeee
Confidence            33666665                          7999999999999999999999986   345 99999999987

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.79  E-value=2.7e-19  Score=126.90  Aligned_cols=83  Identities=23%  Similarity=0.430  Sum_probs=63.3

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc--------------cccCchhHHHHHHH-------------------------hhc
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS--------------ITNDTNSILRFLLL-------------------------LLC   69 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~--------------~~~~~~~~~~~~~~-------------------------~~~   69 (127)
                      ++|++.+.||+|+||+||+|+++.              .......|..++..                         |+.
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~   86 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG   86 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC
Confidence            469999999999999999999875              01112245555444                         221


Q ss_pred             chh------------------------HHHHHHHHCCcEecCCCCCCEEEec---CCCeEEEEeccccee
Q psy7471          70 AGD------------------------ACLTFLHRHGVVYRDLKLDNILLDA---GGSLLKLADFGRCAR  112 (127)
Q Consensus        70 ~g~------------------------~al~~lH~~~iih~dlk~~nil~~~---~~~~~kl~dfg~a~~  112 (127)
                      ++.                        .|+.|||+++|+||||||+||+++.   +.. ++++|||+|+.
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~-vkl~DFG~a~~  155 (299)
T d1ckia_          87 PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNL-VYIIDFGLAKK  155 (299)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTC-EEECCCSSCEE
T ss_pred             CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCce-eeeeccCccee
Confidence            111                        7899999999999999999999764   345 99999999997

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1e-19  Score=130.85  Aligned_cols=87  Identities=41%  Similarity=0.746  Sum_probs=70.4

Q ss_pred             cccCCCeEEEEEeceeCCceEEEEEEcc------------c-----------ccCchhHHHHHHH---------------
Q psy7471          25 KVGLEDFHFIKVLGKGSFGKELFGHYRS------------I-----------TNDTNSILRFLLL---------------   66 (127)
Q Consensus        25 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~-----------~~~~~~~~~~~~~---------------   66 (127)
                      .+.+++|++.+.||+|+||+||+|++..            +           ......|+.++..               
T Consensus        20 ~~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~   99 (322)
T d1vzoa_          20 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ   99 (322)
T ss_dssp             CCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred             ccchhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeec
Confidence            3567999999999999999999998732            0           0112256666655               


Q ss_pred             ----------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                                |+.+|+                        .|+.|+|+++|+||||||+||+++.++. +||+|||+++.
T Consensus       100 ~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~-vkL~DFG~a~~  178 (322)
T d1vzoa_         100 TETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH-VVLTDFGLSKE  178 (322)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC-EEESCSSEEEE
T ss_pred             cCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCC-EEEeeccchhh
Confidence                      444443                        7899999999999999999999999998 99999999987

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=4.4e-20  Score=131.95  Aligned_cols=39  Identities=31%  Similarity=0.459  Sum_probs=37.4

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|+|+++++||||||.|||++.+.. +||+|||+++.
T Consensus       138 ~gl~~lH~~~iiHrDlkp~NIL~~~~~~-~kl~DfG~a~~  176 (309)
T d1fvra_         138 RGMDYLSQKQFIHRDLAARNILVGENYV-AKIADFGLSRG  176 (309)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEECGGGC-EEECCTTCEES
T ss_pred             HHHHhhhcCCccccccccceEEEcCCCc-eEEcccccccc
Confidence            7899999999999999999999999998 99999999976

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.3e-19  Score=129.43  Aligned_cols=85  Identities=28%  Similarity=0.517  Sum_probs=66.9

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc---------c--ccC-------chhHHHHHHH----------------------
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS---------I--TND-------TNSILRFLLL----------------------   66 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~---------~--~~~-------~~~~~~~~~~----------------------   66 (127)
                      .+++|++.+.||+|+||+||+|+++.         +  ...       ...|+.++..                      
T Consensus         8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~   87 (318)
T d3blha1           8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   87 (318)
T ss_dssp             BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred             ccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccc
Confidence            36899999999999999999999875         0  000       1144555544                      


Q ss_pred             ----------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ----------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ----------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                                |+..+.                        .||.|||+++|+||||||+|||++.++. +|++|||+++.
T Consensus        88 ~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~-~kl~dfg~~~~  166 (318)
T d3blha1          88 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV-LKLADFGLARA  166 (318)
T ss_dssp             ---CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC-EEECCCTTCEE
T ss_pred             cCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCc-EEeeecceeee
Confidence                      122211                        8999999999999999999999999999 99999999976

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=8.8e-20  Score=128.51  Aligned_cols=86  Identities=26%  Similarity=0.460  Sum_probs=62.3

Q ss_pred             ccCCCeEEEEEeceeCCceEEEEEEcc------------cc----cCch------hHHHHHHH-----------------
Q psy7471          26 VGLEDFHFIKVLGKGSFGKELFGHYRS------------IT----NDTN------SILRFLLL-----------------   66 (127)
Q Consensus        26 ~~~~~~~~~~~lg~G~fg~V~~~~~~~------------~~----~~~~------~~~~~~~~-----------------   66 (127)
                      +..++|++.+.||+|+||+||+|++..            +.    ...+      .|+.++..                 
T Consensus         5 i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~   84 (273)
T d1u46a_           5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP   84 (273)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             EchHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecc
Confidence            456789999999999999999998753            00    0111      22223322                 


Q ss_pred             ------hhcchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            |+.+|+                         .||.|||+++|+||||||+||+++.+.. +||+|||+++.
T Consensus        85 ~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~-vkl~DfGl~~~  160 (273)
T d1u46a_          85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRA  160 (273)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE-EEECCCTTCEE
T ss_pred             hheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccc-eeeccchhhhh
Confidence                  344333                         7899999999999999999999999998 99999999997

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=6.3e-20  Score=128.38  Aligned_cols=85  Identities=27%  Similarity=0.531  Sum_probs=67.1

Q ss_pred             cCCCeEEEEEeceeCCceEEEEEEcc--------cccCc------hhHHHHHHH------------------------hh
Q psy7471          27 GLEDFHFIKVLGKGSFGKELFGHYRS--------ITNDT------NSILRFLLL------------------------LL   68 (127)
Q Consensus        27 ~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~~~------~~~~~~~~~------------------------~~   68 (127)
                      +.++|++.++||+|+||+||+|++++        +....      ..|..++..                        |+
T Consensus         2 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           2 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             ChHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            45789999999999999999999975        11111      123333332                        44


Q ss_pred             cchh-------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          69 CAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        69 ~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .+|+                         .|+.|||+++|+||||||.||+++.++. +||+|||+++.
T Consensus        82 ~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~-~kl~DfG~a~~  149 (258)
T d1k2pa_          82 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-VKVSDFGLSRY  149 (258)
T ss_dssp             TTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCC-EEECCCSSCCB
T ss_pred             CCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCc-EEECcchhhee
Confidence            4443                         7999999999999999999999999998 99999999986

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.78  E-value=3.3e-19  Score=125.38  Aligned_cols=84  Identities=21%  Similarity=0.374  Sum_probs=66.0

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------c----ccCch------hHHHHHHH----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------I----TNDTN------SILRFLLL----------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~----~~~~~------~~~~~~~~----------------------   66 (127)
                      .++|++.+.||+|+||+||+|+++.         +    ..+..      .|..++..                      
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            4679999999999999999999875         1    01111      22333322                      


Q ss_pred             ------hhcchh------------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD------------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~------------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            |+.+++                        .|+.|||+++|+||||||+||+++.++. .+++|||.++.
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~-~~l~d~~~~~~  160 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-VKVMDFGIARA  160 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSC-EEECCCTTCEE
T ss_pred             EEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCcccc-ceeehhhhhhh
Confidence                  444443                        8999999999999999999999999999 99999998875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.78  E-value=4.3e-19  Score=125.89  Aligned_cols=83  Identities=28%  Similarity=0.400  Sum_probs=63.4

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc--------cc------cCchhHHHHHHH-------------------------hh
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS--------IT------NDTNSILRFLLL-------------------------LL   68 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~--------~~------~~~~~~~~~~~~-------------------------~~   68 (127)
                      -++|++.+.||+|+||+||+|+++.        +.      .....+.+.+..                         |+
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            3679999999999999999999875        10      111234444433                         22


Q ss_pred             cchh-------------------------HHHHHHHHCCcEecCCCCCCEEEec-----CCCeEEEEeccccee
Q psy7471          69 CAGD-------------------------ACLTFLHRHGVVYRDLKLDNILLDA-----GGSLLKLADFGRCAR  112 (127)
Q Consensus        69 ~~g~-------------------------~al~~lH~~~iih~dlk~~nil~~~-----~~~~~kl~dfg~a~~  112 (127)
                       +++                         .|+.|||+++|+||||||+||+++.     .+. ++|+|||+|+.
T Consensus        84 -~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~-vkl~DFG~a~~  155 (293)
T d1csna_          84 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANM-IYVVDFGMVKF  155 (293)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTC-EEECCCTTCEE
T ss_pred             -CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCc-eEEcccceeEE
Confidence             111                         7899999999999999999999975     355 99999999986

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.5e-19  Score=130.47  Aligned_cols=84  Identities=26%  Similarity=0.447  Sum_probs=63.0

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------ccc---C------chhHHHHHHH-----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITN---D------TNSILRFLLL-----------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~---~------~~~~~~~~~~-----------------------   66 (127)
                      .++|++.+.||+|+||+||+|+++.         +..   .      ...|+.++..                       
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            3789999999999999999999875         110   0      1134444444                       


Q ss_pred             ------hhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 ------LLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 ------~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                            |+.+|+                       .||.|||+++|+||||||+|||++.++. +|++|||++..
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~-~kl~dfg~a~~  170 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARH  170 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC-EEECCC----C
T ss_pred             eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccccc-ccccccchhcc
Confidence                  223333                       8999999999999999999999999999 99999999876

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.1e-19  Score=125.93  Aligned_cols=39  Identities=31%  Similarity=0.450  Sum_probs=37.7

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|||+++|+||||||+|||++.++. +|++|||+++.
T Consensus       118 ~gl~ylH~~~iiHrDlKp~Nill~~~~~-~kl~DFGla~~  156 (277)
T d1xbba_         118 MGMKYLEESNFVHRDLAARNVLLVTQHY-AKISDFGLSKA  156 (277)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEEEETTE-EEECCCTTCEE
T ss_pred             HHHhhHHhCCcccCCCcchhhcccccCc-ccccchhhhhh
Confidence            8999999999999999999999999998 99999999986

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.4e-20  Score=131.27  Aligned_cols=83  Identities=28%  Similarity=0.444  Sum_probs=64.1

Q ss_pred             CCeEEEEEeceeCCceEEEEEEcc-------cccCch----hHHH------------------------------HHHHh
Q psy7471          29 EDFHFIKVLGKGSFGKELFGHYRS-------ITNDTN----SILR------------------------------FLLLL   67 (127)
Q Consensus        29 ~~~~~~~~lg~G~fg~V~~~~~~~-------~~~~~~----~~~~------------------------------~~~~~   67 (127)
                      .+|.+.+.||+|+||.||+|++.+       +..+..    .+.+                              ++++|
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey   82 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence            578999999999999999999877       111111    1111                              22225


Q ss_pred             hcchh-----------------------HHHHHHHH--------CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          68 LCAGD-----------------------ACLTFLHR--------HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        68 ~~~g~-----------------------~al~~lH~--------~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      +.+|+                       .|+.|+|.        ++|+||||||+|||++.++. +||+|||+++.
T Consensus        83 ~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~-~Kl~DFGl~~~  157 (303)
T d1vjya_          83 HEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT-CCIADLGLAVR  157 (303)
T ss_dssp             CTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSC-EEECCCTTCEE
T ss_pred             ccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCC-eEEEecCcccc
Confidence            55554                       78999996        59999999999999999998 99999999987

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.4e-18  Score=125.45  Aligned_cols=83  Identities=24%  Similarity=0.422  Sum_probs=60.0

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------ccc---C------chhHHHHHHH-----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITN---D------TNSILRFLLL-----------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~---~------~~~~~~~~~~-----------------------   66 (127)
                      .++|++.+.||+|+||+||+|+++.         +..   .      ...|+.++..                       
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            5789999999999999999999875         110   1      1134444443                       


Q ss_pred             -------hhcchh-----------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAGD-----------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g~-----------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+ +.+                       .||.|||+++|+||||||+|||++.++. +|++|||+|+.
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~-~kl~Dfg~a~~  170 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCE-LKILDFGLARQ  170 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC-EEECCCTTCEE
T ss_pred             eEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccc-cccccccceec
Confidence                   11 111                       8999999999999999999999999999 99999999987

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=4.7e-18  Score=121.58  Aligned_cols=39  Identities=36%  Similarity=0.489  Sum_probs=37.6

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .|+.|+|+++|+||||||.|||++.+.. +||+|||+++.
T Consensus       141 ~gL~~lH~~~iiHrDLK~~NILl~~~~~-~kL~DFG~~~~  179 (311)
T d1r0pa_         141 KGMKFLASKKFVHRDLAARNCMLDEKFT-VKVADFGLARD  179 (311)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECTTCC-EEECSSGGGCC
T ss_pred             HhhhhhcccCcccCCccHHhEeECCCCC-EEEecccchhh
Confidence            7899999999999999999999999998 99999999987

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.9e-18  Score=124.36  Aligned_cols=84  Identities=26%  Similarity=0.400  Sum_probs=61.4

Q ss_pred             CCCeEEEEEeceeCCceEEEEEEcc---------ccc---Cc------hhHHHHHHH-----------------------
Q psy7471          28 LEDFHFIKVLGKGSFGKELFGHYRS---------ITN---DT------NSILRFLLL-----------------------   66 (127)
Q Consensus        28 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~---~~------~~~~~~~~~-----------------------   66 (127)
                      +++|++.++||+|+||+||+|+++.         +..   ..      ..|+.++..                       
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence            3789999999999999999999975         110   11      133333333                       


Q ss_pred             -------hhcchh---------------------HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          67 -------LLCAGD---------------------ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        67 -------~~~~g~---------------------~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                             |+.++.                     .|+.|||+++|+||||||+||+++.++. ++++|||+++.
T Consensus        96 ~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~-~kl~df~~~~~  168 (355)
T d2b1pa1          96 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFGLART  168 (355)
T ss_dssp             EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC-EEECCCCC---
T ss_pred             eeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccc-eeeechhhhhc
Confidence                   332222                     8999999999999999999999999999 99999999876

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.67  E-value=1.3e-16  Score=106.46  Aligned_cols=38  Identities=21%  Similarity=0.332  Sum_probs=34.8

Q ss_pred             HHHHHHHHCCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          73 ACLTFLHRHGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++.|||.++|+||||||.|||++. .. ++|+|||+|..
T Consensus       114 ~~l~~lH~~giiHrDiKP~NILv~~-~~-~~liDFG~a~~  151 (191)
T d1zara2         114 EEVAKFYHRGIVHGDLSQYNVLVSE-EG-IWIIDFPQSVE  151 (191)
T ss_dssp             HHHHHHHHTTEECSCCSTTSEEEET-TE-EEECCCTTCEE
T ss_pred             HHHHHHhhCCEEEccCChhheeeeC-CC-EEEEECCCccc
Confidence            7899999999999999999999985 44 89999999876

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.64  E-value=1.6e-16  Score=114.73  Aligned_cols=40  Identities=33%  Similarity=0.640  Sum_probs=34.9

Q ss_pred             HHHHHHHH-CCcEecCCCCCCEEEecCCC-----eEEEEeccccee
Q psy7471          73 ACLTFLHR-HGVVYRDLKLDNILLDAGGS-----LLKLADFGRCAR  112 (127)
Q Consensus        73 ~al~~lH~-~~iih~dlk~~nil~~~~~~-----~~kl~dfg~a~~  112 (127)
                      .|+.|||+ .+|+||||||+|||++..+.     .++++|||.+..
T Consensus       136 ~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~  181 (362)
T d1q8ya_         136 LGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW  181 (362)
T ss_dssp             HHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEE
T ss_pred             HHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccc
Confidence            78999998 89999999999999975532     289999999987

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.76  E-value=0.0038  Score=42.63  Aligned_cols=31  Identities=29%  Similarity=0.307  Sum_probs=26.8

Q ss_pred             CCcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          81 HGVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        81 ~~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++||.|+.+.|++++.+.. .-+.||+.+-.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v-~gvIDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDEL-SGLIDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEE-EEECCCTTCEE
T ss_pred             cccccCCcchhhhhcccccc-eeEeccccccc
Confidence            37999999999999998765 78999997764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.52  E-value=0.019  Score=37.61  Aligned_cols=30  Identities=30%  Similarity=0.382  Sum_probs=25.2

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.|.||+++.... +.++||..+..
T Consensus       184 ~l~HgD~~~~Nil~~~~~~-~~lIDwe~a~~  213 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKV-SGFIDLGRSGR  213 (263)
T ss_dssp             EEECSCCCTTSEEEETTEE-EEECCCTTCEE
T ss_pred             EEEEeeccCcceeecCCce-EEEeechhccc
Confidence            3899999999999987655 67999987765

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=93.25  E-value=0.016  Score=37.87  Aligned_cols=30  Identities=30%  Similarity=0.320  Sum_probs=25.4

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.|.||+++.... +.|+||+.+..
T Consensus       176 ~liHgD~~~~Nvl~~~~~~-~~iID~~~~~~  205 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGRF-SGFIDCGRLGV  205 (255)
T ss_dssp             EEECSSCCGGGEEEETTEE-EEECCCTTCEE
T ss_pred             eEEeCCCCCcceEEeCCce-EEEEEchhccc
Confidence            3799999999999997655 78999988765

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=89.04  E-value=0.085  Score=37.10  Aligned_cols=29  Identities=17%  Similarity=0.116  Sum_probs=24.9

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      .++|+|+.|.||+++.+ . ++++||.++..
T Consensus       224 ~LiHGDl~~gNIlv~~~-~-~~vID~E~a~~  252 (392)
T d2pula1         224 TLIHGDLHTGSIFASEH-E-TKVIDPEFAFY  252 (392)
T ss_dssp             EEECSCCCGGGEEECSS-C-EEECCCTTCEE
T ss_pred             ceeccCCcCCceeEcCC-c-eEEechhhccc
Confidence            58999999999999854 4 89999988765

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=83.06  E-value=0.19  Score=35.07  Aligned_cols=15  Identities=40%  Similarity=0.454  Sum_probs=13.1

Q ss_pred             cEecCCCCCCEEEec
Q psy7471          83 VVYRDLKLDNILLDA   97 (127)
Q Consensus        83 iih~dlk~~nil~~~   97 (127)
                      ++|+|+.+.||++..
T Consensus       220 ~CHnDL~~~NiL~~~  234 (395)
T d1nw1a_         220 FCHNDLQEGNILLPK  234 (395)
T ss_dssp             EECSCCCGGGEEEEC
T ss_pred             EEecCCCcccEeecc
Confidence            679999999999853

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=82.57  E-value=0.19  Score=34.16  Aligned_cols=28  Identities=18%  Similarity=0.132  Sum_probs=22.8

Q ss_pred             CcEecCCCCCCEEEecCCCeEEEEeccccee
Q psy7471          82 GVVYRDLKLDNILLDAGGSLLKLADFGRCAR  112 (127)
Q Consensus        82 ~iih~dlk~~nil~~~~~~~~kl~dfg~a~~  112 (127)
                      ++||.|+.+.|++++.  . ..++||+-+..
T Consensus       193 ~liHgDlh~~NvL~~~--~-~~~IDFdd~~~  220 (325)
T d1zyla1         193 LRLHGDCHAGNILWRD--G-PMFVDLDDARN  220 (325)
T ss_dssp             EECCSSCSGGGEEESS--S-EEECCCTTCCE
T ss_pred             eeecCCCCcccEEEeC--C-ceEEechhccc
Confidence            6899999999999863  3 45899987765