BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7473
(136 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 123 bits (309), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
Query: 25 WYDRIDENIILGALPFKRLTNKL-LEENVKGVVSMNEDYELYF-ANGREEWNKVGVEFLQ 82
WY RID ++LGALP K +T +L L+ENV+GV++MNE+YE F N +EW K GVE L+
Sbjct: 1 WYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLR 60
Query: 83 LSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
LST D+ P L +GV F + G VYVHCKAGR+RSAT+V YL++
Sbjct: 61 LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQ 113
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 119 bits (299), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
Query: 25 WYDRIDENIILGALPFKRLTNKL-LEENVKGVVSMNEDYELYF-ANGREEWNKVGVEFLQ 82
WY RID ++LGALP K +T +L L+ENV+GV++MNE+YE F N +EW K GVE L+
Sbjct: 2 WYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLR 61
Query: 83 LSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
LST D+ P L +GV F + G VYVH KAGR+RSAT+V YL++
Sbjct: 62 LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHSKAGRSRSATMVAAYLIQ 114
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 71 EEWNKVGVEFLQLSTRDIFDTPDQD---KLERGVDFIQR-ISKTGGTVYVHCKAGRTRSA 126
E + +G+ +L + + D+P D + DFI R +S+ GG + VHC G +RSA
Sbjct: 44 EAYEGLGIRYLGV---EAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSA 100
Query: 127 TLVGCYLM 134
TLV YLM
Sbjct: 101 TLVLAYLM 108
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 71 EEWNKVGVEFLQLSTRDIFDTPDQD---KLERGVDFIQR-ISKTGGTVYVHCKAGRTRSA 126
E + +G+ +L + + D+P D + DFI R +S+ GG + VH G +RSA
Sbjct: 45 EAYEGLGIRYLGV---EAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHSAVGVSRSA 101
Query: 127 TLVGCYLM 134
TLV YLM
Sbjct: 102 TLVLAYLM 109
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 73 WNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI-QRISKTGGTVYVHCKAGRTRSATLVGC 131
+ G+ +L + D + ER DFI Q +++ G V VHC+ G +RS TLV
Sbjct: 76 YKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIA 135
Query: 132 YLM 134
YLM
Sbjct: 136 YLM 138
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 73 WNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI-QRISKTGGTVYVHCKAGRTRSATLVGC 131
+ G+ +L + D + ER DFI Q +++ G V VHC+ G +RS TLV
Sbjct: 77 YKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIA 136
Query: 132 YLM 134
YLM
Sbjct: 137 YLM 139
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 79 EFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
E++++ D+ P + D I +S+ G VHC AG +RSATL YLMK
Sbjct: 71 EYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMK 127
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 35 LGALPFKRLTNK---LLEENVKGVVSMNEDYELYFANGREEWNKV-GVEFLQLSTRDIFD 90
L L RL LL+ V+ +VS+ E G + G+ +L D F
Sbjct: 16 LAGLALPRLPAHYQFLLDLGVRHLVSLTE-------RGPPHSDSCPGLTLHRLRIPD-FC 67
Query: 91 TPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
P D+++R V + + G V VHC G R+ T++ CYL+K
Sbjct: 68 PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVK 112
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Query: 35 LGALPFKRLTNK---LLEENVKGVVSMNEDYELYFANGREEWNKV-GVEFLQLSTRDIFD 90
L L RL LL+ V+ +VS+ E G + G+ +L D F
Sbjct: 17 LAGLALPRLPAHYQFLLDLGVRHLVSLTE-------RGPPHSDSCPGLTLHRLRIPD-FC 68
Query: 91 TPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
P D+++R V + + G V VHC G R+ T + CYL+K
Sbjct: 69 PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTXLACYLVK 113
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 87 DIFDTPDQD---KLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
+FD P +D LE ++ + GG+ V+CK GR+RSA + YLM+
Sbjct: 62 PVFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMR 113
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 23/76 (30%)
Query: 60 EDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCK 119
+ ++L+FA+G + + EFL DI + + G + VHCK
Sbjct: 241 DHHDLFFADGSTPTDAIVKEFL-----DICENAE------------------GAIAVHCK 277
Query: 120 AGRTRSATLVGCYLMK 135
AG R+ TL+ CY+MK
Sbjct: 278 AGLGRTGTLIACYIMK 293
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 73 WNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI-QRISKTGGTVYVHCKAGRTRSATLVGC 131
+ G+ +L + D + ER DFI Q +++ G V VH + G +RS TLV
Sbjct: 77 YKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIA 136
Query: 132 YLM 134
YLM
Sbjct: 137 YLM 139
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 95 DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
+ +DFI + + GG V VH +AG +RS T+ YLMK
Sbjct: 67 SHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMK 107
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 78 VEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
++++Q+ D ++ D + D I + G +HC AG +RSA L YLMK
Sbjct: 64 IQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMK 121
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 97 LERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
+ + FI + +GG V VH +AG +RSAT+ YLM+
Sbjct: 67 FQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQ 105
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 78 VEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134
+ +L++ D + P + + ++FI GG VH AG +RS T+V Y+M
Sbjct: 51 ITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVM 107
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 77 GVEFLQLSTRDIFDTPDQD---KLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYL 133
GV++L + D +P Q+ + + FI G + VHC AG +RS TLV Y+
Sbjct: 49 GVKYLCIPAAD---SPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYI 105
Query: 134 M 134
M
Sbjct: 106 M 106
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 23/76 (30%)
Query: 60 EDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCK 119
+ ++L+FA+G + + EFL DI + + G + VH K
Sbjct: 241 DHHDLFFADGSTPTDAIVKEFL-----DICENAE------------------GAIAVHSK 277
Query: 120 AGRTRSATLVGCYLMK 135
AG R+ TL+ CY+MK
Sbjct: 278 AGLGRTGTLIACYIMK 293
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 103 FIQR-ISKTGGTVYVHCKAGRTRSATLVGCYLM 134
FI R +S + VHC GR+RSATLV YLM
Sbjct: 130 FIDRALSDDHSKILVHCVMGRSRSATLVLAYLM 162
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 107 ISKTGGTVYVHCKAGRTRSATLVGCYLMKC 136
+S G V VHC G +RSATLV +LM C
Sbjct: 127 LSVPQGRVLVHCAMGVSRSATLVLAFLMIC 156
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 109 KTGGTVYVHCKAGRTRSATLVGCYLMK 135
+ G + +HC+AG +RSAT+V YLMK
Sbjct: 85 QCGKGLLIHCQAGVSRSATIVIAYLMK 111
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 109 KTGGTVYVHCKAGRTRSATLVGCYLMK 135
+ G + +HC+AG +RSAT+V YLMK
Sbjct: 81 QCGKGLLIHCQAGVSRSATIVIAYLMK 107
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 33.1 bits (74), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 72 EWNKVGVEFLQL---STRDIFDTPDQDKL---ERGVDFIQRISKTGGTVYVHCKAGRTRS 125
E N + F QL DI D P ++ + +FI + GG V VH AG +RS
Sbjct: 45 EANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRS 104
Query: 126 ATLVGCYLMK 135
A V Y+M+
Sbjct: 105 AAFVIAYIME 114
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 107 ISKTGGTVYVHCKAGRTRSATLVGCYLM 134
+S G V VHC G +RSATLV +LM
Sbjct: 127 LSVPQGRVLVHCAMGVSRSATLVLAFLM 154
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 114 VYVHCKAGRTRSATLVGCYLMK 135
+ +HC+ G +RSATL+ Y+MK
Sbjct: 120 ILIHCQCGLSRSATLIIAYIMK 141
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 32.3 bits (72), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 87 DIFDTPDQDKLE---RGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134
I D P+ + L +FI+ + G V VH AG +R+A +V +LM
Sbjct: 54 SILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLM 104
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 100 GVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
++FI V VHC AG +RS T+ YLM+
Sbjct: 71 AIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQ 106
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 32.3 bits (72), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 100 GVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134
+++I + G V VH +AG +RSAT+ YLM
Sbjct: 70 AIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLM 104
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 103 FIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
FI + K G VH K G +RSA+ V Y MK
Sbjct: 73 FISKAKKHGSKCLVHSKMGVSRSASTVIAYAMK 105
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Query: 92 PDQDKLERGVDFIQRISK-----TGGTVYVHCKAGRTRSATLVGCY 132
PD E F + +S T + VHC AG R+ TL+G Y
Sbjct: 198 PDHGVPESAASFDELLSVIKNCVTTSPILVHCSAGIGRTGTLIGAY 243
>pdb|1WCH|A Chain A, Crystal Structure Of Ptpl1 Human Tyrosine Phosphatase
Mutated In Colorectal Cancer - Evidence For A Second
Phosphotyrosine Substrate Recognition Pocket
Length = 315
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 90 DTPDQ-DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129
DTP Q D L + +++ I ++G + HC AG RS TL+
Sbjct: 218 DTPSQPDDLLTFISYMRHIHRSG-PIITHCSAGIGRSGTLI 257
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 114 VYVHCKAGRTRSATLVGCYLMK 135
+ +HCKAG+ R+ TLV +L++
Sbjct: 117 IAIHCKAGKGRTGTLVSSWLLE 138
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 108 SKTGGTVYVHCKAGRTRSATLVGCY 132
S T V VHC AG R+ TL+G Y
Sbjct: 216 SPTTVPVVVHCSAGIGRTGTLIGAY 240
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 37 ALPFKRLTNKLLE---ENVKGVVSMNEDYELYFANGREEW-----NKVGVEFLQLSTRDI 88
LP+ N++LE E VK V+ + ED+E+ + G +++ K G++ L + D
Sbjct: 13 GLPYTE--NEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPD- 69
Query: 89 FDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134
P + + ++ +S+ G + VHC G R+ T++ YL+
Sbjct: 70 GGVPSDSQFLTIMKWL--LSEKEGNL-VHCVGGIGRTGTILASYLI 112
>pdb|1XRI|A Chain A, X-ray Structure Of A Putative Phosphoprotein Phosphatase
From Arabidopsis Thaliana Gene At1g05000
pdb|1XRI|B Chain B, X-ray Structure Of A Putative Phosphoprotein Phosphatase
From Arabidopsis Thaliana Gene At1g05000
pdb|2Q47|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of A
Putative Phosphoprotein Phosphatase From Arabidopsis
Thaliana Gene At1g05000
pdb|2Q47|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of A
Putative Phosphoprotein Phosphatase From Arabidopsis
Thaliana Gene At1g05000
Length = 151
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 113 TVYVHCKAGRTRSATLVGC 131
V +HCK G+ R+ LVGC
Sbjct: 94 PVLIHCKRGKHRTGCLVGC 112
>pdb|3AWE|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
Length = 334
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 114 VYVHCKAGRTRSATLVGCYLMK 135
+ +HCK G+ R+ TLV +L++
Sbjct: 117 IAIHCKGGKGRTGTLVSSWLLE 138
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 114 VYVHCKAGRTRSATLVGCYLMK 135
+ +H + G +RSATL+ Y+MK
Sbjct: 120 ILIHSQCGLSRSATLIIAYIMK 141
>pdb|3AWF|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
Length = 346
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 114 VYVHCKAGRTRSATLVGCYLMK 135
+ +HCK G+ R+ TLV +L++
Sbjct: 129 IAIHCKGGKGRTGTLVSSWLLE 150
>pdb|3V0I|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576, E411f
Length = 324
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 114 VYVHCKAGRTRSATLVGCYLMK 135
+ +HCK G+ R+ TLV +L++
Sbjct: 107 IAIHCKGGKGRTGTLVSSWLLE 128
>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
Length = 324
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 29 IDENIILGALPFKRLTNKLLEENVKGVV-----SMNEDYELYFANGREEWN--KVGVEFL 81
I NII P +RL + N+ VV Y++Y ++ K
Sbjct: 22 IYPNIIAMGFPAERLEG-VYRNNIDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNCRVA 80
Query: 82 QLSTRDIFDTPDQDKLERGV--DFIQRISKTGGTVY-VHCKAGRTRSATLVGCYLM 134
Q D P Q +L + D Q +S+ V +HCKAG+ R+ ++ YL+
Sbjct: 81 QYPFED--HNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLL 134
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 100 GVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
++FI V VH AG +RS T+ YLM+
Sbjct: 74 AIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQ 109
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 114 VYVHCKAGRTRSATLVGCYLMK 135
+ +H + G +RSATL+ Y+MK
Sbjct: 120 ILIHXQCGLSRSATLIIAYIMK 141
>pdb|1LJ8|A Chain A, Crystal Structure Of Mannitol Dehydrogenase In Complex
With Nad
pdb|1M2W|A Chain A, Pseudomonas Fluorescens Mannitol 2-Dehydrogenase Ternary
Complex With Nad And D-Mannitol
pdb|1M2W|B Chain B, Pseudomonas Fluorescens Mannitol 2-Dehydrogenase Ternary
Complex With Nad And D-Mannitol
Length = 493
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 66 FANGREEWNKVGVEF 80
F NGR W KVGV+F
Sbjct: 270 FVNGRPAWEKVGVQF 284
>pdb|2YXL|A Chain A, Crystal Structure Of Ph0851
Length = 450
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 35 LGALPFKRLTNKLLEENVKGVVSMNEDYELYF--ANGREEWNKVGVEFLQLSTRDIFDTP 92
L L +K L L E VKG+ + ++ E +F N R EW + V L+ + ++
Sbjct: 148 LEELEWKYLAPSWLIERVKGI--LGDETEDFFRSVNKRHEWISIRVNTLKANVEEVIGEL 205
Query: 93 DQDKLE 98
++D +E
Sbjct: 206 EEDGVE 211
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 91 TPD--QDKLERGVDFIQ-RISKTG-GTVYVHCKAGRTRS----ATLVGCYLMK 135
TPD Q L+ +D + R++ G G V VHC AG R+ AT +GC +K
Sbjct: 185 TPDSAQPLLQLMLDVEEDRLASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLK 237
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 91 TPD--QDKLERGVDFIQ-RISKTG-GTVYVHCKAGRTRS----ATLVGCYLMK 135
TPD Q L+ +D + R++ G G V VHC AG R+ AT +GC +K
Sbjct: 198 TPDSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLK 250
>pdb|2C7S|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Kappa At 1.95a Resolution
Length = 313
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 8/38 (21%)
Query: 101 VDFIQRI----SKTGGTVYVHCKAGRTRSATLVGCYLM 134
+ FI+R+ + G + VHC AG R+ GCY++
Sbjct: 220 LSFIRRVKLSNPPSAGPIVVHCSAGAGRT----GCYIV 253
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 99 RGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
+ FI V VH AG +RS T+ YLM+
Sbjct: 71 EAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQ 107
>pdb|1MX0|A Chain A, Structure Of Topoisomerase Subunit
pdb|1MX0|B Chain B, Structure Of Topoisomerase Subunit
pdb|1MX0|C Chain C, Structure Of Topoisomerase Subunit
pdb|1MX0|D Chain D, Structure Of Topoisomerase Subunit
pdb|1MX0|E Chain E, Structure Of Topoisomerase Subunit
pdb|1MX0|F Chain F, Structure Of Topoisomerase Subunit
Length = 472
Score = 26.6 bits (57), Expect = 5.1, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 27 DRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTR 86
D+I E + G P K++ N L EE + +V + YE + + + + +G + ++L +
Sbjct: 273 DKILE--LAGLKPNKKVKN-LTEEEITRLVETFKKYEDFRSPSADSLSVIGEDLIELGLK 329
Query: 87 DIFDTPD 93
IF+ PD
Sbjct: 330 KIFN-PD 335
>pdb|1MU5|A Chain A, Structure Of Topoisomerase Subunit
Length = 471
Score = 26.6 bits (57), Expect = 5.1, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 27 DRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTR 86
D+I E + G P K++ N L EE + +V + YE + + + + +G + ++L +
Sbjct: 272 DKILE--LAGLKPNKKVKN-LTEEEITRLVETFKKYEDFRSPSADSLSVIGEDLIELGLK 328
Query: 87 DIFDTPD 93
IF+ PD
Sbjct: 329 KIFN-PD 334
>pdb|1Z59|A Chain A, Topoisomerase Vi-B, Adp-Bound Monomer Form
pdb|1Z5C|A Chain A, Topoisomerase Vi-B, Adp Pi Bound Dimer Form
pdb|1Z5C|B Chain B, Topoisomerase Vi-B, Adp Pi Bound Dimer Form
Length = 469
Score = 26.2 bits (56), Expect = 5.6, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 27 DRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTR 86
D+I E + G P K++ N L EE + +V + YE + + + + +G + ++L +
Sbjct: 270 DKILE--LAGLKPNKKVKN-LTEEEITRLVETFKKYEDFRSPSADSLSVIGEDLIELGLK 326
Query: 87 DIFDTPD 93
IF+ PD
Sbjct: 327 KIFN-PD 332
>pdb|1Z5A|A Chain A, Topoisomerase Vi-B, Adp-Bound Dimer Form
pdb|1Z5A|B Chain B, Topoisomerase Vi-B, Adp-Bound Dimer Form
pdb|1Z5B|A Chain A, Topoisomerase Vi-B, Adp Alf4- Bound Dimer Form
pdb|1Z5B|B Chain B, Topoisomerase Vi-B, Adp Alf4- Bound Dimer Form
pdb|2HKJ|A Chain A, Topoisomerase Vi-B Bound To Radicicol
Length = 469
Score = 26.2 bits (56), Expect = 5.6, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 27 DRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTR 86
D+I E + G P K++ N L EE + +V + YE + + + + +G + ++L +
Sbjct: 270 DKILE--LAGLKPNKKVKN-LTEEEITRLVETFKKYEDFRSPSADSLSVIGEDLIELGLK 326
Query: 87 DIFDTPD 93
IF+ PD
Sbjct: 327 KIFN-PD 332
>pdb|2Z51|A Chain A, Crystal Structure Of Arabidopsis Cnfu Involved In Iron-
Sulfur Cluster Biosynthesis
Length = 154
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 23 RRWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANG 69
RR ++I E + + ALP + +L EEN++ V+ Y + A+G
Sbjct: 61 RRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADG 107
>pdb|1PKM|A Chain A, The Refined Three-Dimensional Structure Of Cat Muscle (M1)
Pyruvate Kinase, At A Resolution Of 2.6 Angstroms
Length = 530
Score = 25.8 bits (55), Expect = 8.1, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 46 KLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKL------ER 99
++L+E +K +++ L F++G E++ ++ ++ +T P + + +
Sbjct: 58 EILKEMIKSGMNVAR---LNFSHGTHEYHAETIKNVRAATESFASDPIRYRPVAVALDTK 114
Query: 100 GVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKC 136
G + + K GT V K G T TL Y+ KC
Sbjct: 115 GPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKC 151
>pdb|2FHX|A Chain A, Pseudomonas Aeruginosa Spm-1 Metallo-Beta-Lactamase
pdb|2FHX|B Chain B, Pseudomonas Aeruginosa Spm-1 Metallo-Beta-Lactamase
Length = 246
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 20 VTSRRWYDR-------IDENIILGALPFKRLTNKLLEENV------KGVVSMNEDYELYF 66
VT R +Y +D +++ + PF+ L + L + V K VV++N + L
Sbjct: 22 VTDRDFYSSNVLVAKMLDGTVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDG 81
Query: 67 ANGREEWNKVGVE 79
G E + K+G E
Sbjct: 82 TGGNEIYKKMGAE 94
>pdb|3NME|A Chain A, Structure Of A Plant Phosphatase
pdb|3NME|B Chain B, Structure Of A Plant Phosphatase
Length = 294
Score = 25.8 bits (55), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 26 YDRIDENIILGA-LPFKRLTNKLLEENVKGVVSMNEDYEL-YFA---NGREEWNK--VGV 78
Y+ I ++I+G+ L +KL + VK + + +D +L YF + + + K +
Sbjct: 13 YNFIRPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDI 72
Query: 79 EFLQLSTRDIFDTPD-QDKLERGVDFI-QRISKTGGTVYVHCKAGRTRSATLVGCY 132
+ ++ RD FD D + +L V + + + + GG YVH AG R+ + Y
Sbjct: 73 QHIRCEIRD-FDAFDLRXRLPAVVGTLYKAVKRNGGVTYVHSTAGXGRAPAVALTY 127
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,143,635
Number of Sequences: 62578
Number of extensions: 164437
Number of successful extensions: 539
Number of sequences better than 100.0: 74
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 475
Number of HSP's gapped (non-prelim): 74
length of query: 136
length of database: 14,973,337
effective HSP length: 88
effective length of query: 48
effective length of database: 9,466,473
effective search space: 454390704
effective search space used: 454390704
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 46 (22.3 bits)