Query psy7473
Match_columns 136
No_of_seqs 202 out of 1173
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 19:14:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7473.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7473hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgo_A Protein-tyrosine phosph 100.0 8.5E-31 2.9E-35 172.8 13.2 111 25-135 1-113 (157)
2 3emu_A Leucine rich repeat and 100.0 2.5E-30 8.7E-35 171.8 9.9 104 24-135 8-111 (161)
3 3s4e_A Dual specificity protei 100.0 5.4E-30 1.9E-34 167.2 9.7 102 26-135 4-105 (144)
4 3ezz_A Dual specificity protei 100.0 3.9E-30 1.3E-34 167.8 8.9 103 25-135 3-105 (144)
5 1zzw_A Dual specificity protei 100.0 3.9E-29 1.3E-33 163.8 12.5 106 24-135 2-107 (149)
6 3f81_A Dual specificity protei 100.0 2E-29 6.8E-34 170.3 10.9 111 25-135 27-139 (183)
7 2hxp_A Dual specificity protei 100.0 2.1E-29 7.3E-34 166.3 10.3 106 23-135 3-109 (155)
8 2r0b_A Serine/threonine/tyrosi 100.0 5.8E-29 2E-33 163.8 11.7 112 21-135 1-114 (154)
9 2oud_A Dual specificity protei 100.0 9.9E-29 3.4E-33 166.3 12.7 107 23-135 5-111 (177)
10 2nt2_A Protein phosphatase sli 100.0 1.9E-29 6.6E-34 164.7 8.8 103 25-135 3-105 (145)
11 2e0t_A Dual specificity phosph 100.0 8.9E-29 3E-33 162.4 10.0 107 26-135 2-109 (151)
12 2pq5_A Dual specificity protei 100.0 3.3E-29 1.1E-33 172.2 8.2 113 22-135 42-155 (205)
13 1yz4_A DUSP15, dual specificit 100.0 3.6E-28 1.2E-32 161.1 12.2 104 23-135 5-108 (160)
14 2esb_A Dual specificity protei 100.0 2.6E-28 8.9E-33 165.8 11.4 106 22-135 16-121 (188)
15 1wrm_A Dual specificity phosph 100.0 2.7E-28 9.4E-33 162.4 11.1 104 24-136 5-108 (165)
16 2hcm_A Dual specificity protei 100.0 2.5E-28 8.4E-33 162.4 10.1 106 22-135 8-113 (164)
17 2g6z_A Dual specificity protei 100.0 2.5E-28 8.5E-33 168.4 9.2 105 23-135 3-107 (211)
18 2y96_A Dual specificity phosph 100.0 3.7E-28 1.3E-32 168.5 9.7 110 25-135 53-163 (219)
19 2wgp_A Dual specificity protei 99.9 1.1E-27 3.6E-32 163.0 9.8 106 22-135 22-127 (190)
20 4erc_A Dual specificity protei 99.9 6.9E-27 2.4E-31 152.9 10.9 104 25-135 7-112 (150)
21 2img_A Dual specificity protei 99.9 8.1E-26 2.8E-30 147.8 11.6 104 25-135 8-113 (151)
22 3cm3_A Late protein H1, dual s 99.9 2.7E-26 9.3E-31 154.2 9.0 102 23-135 29-132 (176)
23 3nme_A Ptpkis1 protein, SEX4 g 99.9 2.1E-26 7.2E-31 165.9 8.9 112 25-136 12-131 (294)
24 2j16_A SDP-1, tyrosine-protein 99.9 1.2E-25 3.9E-30 151.9 9.0 95 28-135 47-141 (182)
25 2q05_A Late protein H1, dual s 99.9 3.4E-26 1.2E-30 156.1 4.7 103 22-135 45-149 (195)
26 1xri_A AT1G05000; structural g 99.9 6.8E-25 2.3E-29 143.8 9.3 106 26-135 8-116 (151)
27 2i6j_A Ssoptp, sulfolobus solf 99.9 2.1E-24 7.1E-29 142.6 7.8 106 26-135 1-113 (161)
28 1fpz_A Cyclin-dependent kinase 99.9 5.2E-23 1.8E-27 141.9 10.7 110 25-135 28-157 (212)
29 3s4o_A Protein tyrosine phosph 99.9 6.3E-22 2.1E-26 131.2 9.8 97 33-135 25-133 (167)
30 1yn9_A BVP, polynucleotide 5'- 99.9 3.3E-21 1.1E-25 128.5 9.7 90 42-135 44-137 (169)
31 3rz2_A Protein tyrosine phosph 99.9 3.2E-21 1.1E-25 130.8 9.2 99 31-135 37-141 (189)
32 1rxd_A Protein tyrosine phosph 99.8 2.3E-20 8E-25 122.7 11.5 98 32-135 17-120 (159)
33 1ohe_A CDC14B, CDC14B2 phospha 99.8 6.1E-21 2.1E-25 140.1 8.9 101 26-135 178-293 (348)
34 2f46_A Hypothetical protein; s 99.8 1.1E-20 3.7E-25 124.6 9.1 105 25-135 16-125 (156)
35 2c46_A MRNA capping enzyme; ph 99.8 2.5E-20 8.6E-25 130.7 9.0 86 47-135 76-165 (241)
36 1d5r_A Phosphoinositide phosph 99.7 1.3E-18 4.4E-23 126.8 1.9 101 26-135 19-135 (324)
37 3gxh_A Putative phosphatase (D 99.7 1.1E-15 3.9E-20 100.6 10.1 112 19-135 8-120 (157)
38 1ywf_A Phosphotyrosine protein 99.6 9.8E-16 3.3E-20 110.3 8.6 103 29-134 42-196 (296)
39 3v0d_A Voltage-sensor containi 99.6 1E-14 3.5E-19 106.6 10.8 103 26-136 27-144 (339)
40 3n0a_A Tyrosine-protein phosph 99.5 3.6E-14 1.2E-18 104.4 9.9 103 24-135 22-139 (361)
41 3mmj_A MYO-inositol hexaphosph 99.5 7.9E-14 2.7E-18 100.3 6.6 63 70-134 174-236 (314)
42 3f41_A Phytase; tandem repeat, 99.3 9.6E-13 3.3E-17 101.9 6.2 64 70-135 491-554 (629)
43 3f41_A Phytase; tandem repeat, 99.3 1.1E-12 3.8E-17 101.6 5.6 64 70-135 193-256 (629)
44 2hc1_A Receptor-type tyrosine- 99.2 6.4E-11 2.2E-15 85.0 9.8 51 84-134 188-241 (291)
45 2b49_A Protein tyrosine phosph 99.2 2.5E-11 8.6E-16 87.0 6.0 52 83-134 181-232 (287)
46 2gjt_A Receptor-type tyrosine- 99.2 1.7E-10 5.8E-15 83.0 9.6 49 83-132 185-237 (295)
47 3i36_A Vascular protein tyrosi 99.1 3.1E-10 1.1E-14 83.1 9.5 52 83-134 206-260 (342)
48 2p6x_A Tyrosine-protein phosph 99.1 3.7E-11 1.3E-15 86.9 4.2 51 83-133 191-242 (309)
49 1fpr_A Protein-tyrosine phosph 99.1 7E-11 2.4E-15 84.5 5.0 51 84-134 174-227 (284)
50 3b7o_A Tyrosine-protein phosph 99.1 1.6E-10 5.5E-15 83.8 6.8 53 82-134 207-262 (316)
51 1p15_A Protein-tyrosine phosph 99.1 8.8E-11 3E-15 82.7 5.2 51 84-134 147-199 (253)
52 4grz_A Tyrosine-protein phosph 99.1 1.9E-10 6.6E-15 82.4 6.7 51 84-134 176-229 (288)
53 4az1_A Tyrosine specific prote 99.1 2E-10 7E-15 82.8 6.5 50 84-134 193-242 (302)
54 3m4u_A Tyrosine specific prote 99.1 1.7E-10 5.7E-15 83.4 5.7 53 81-134 193-245 (306)
55 1jln_A STEP-like ptpase, prote 99.1 2.9E-10 1E-14 81.8 6.7 89 46-134 120-245 (297)
56 1wch_A Protein tyrosine phosph 99.1 2.9E-10 1E-14 82.4 6.6 50 84-134 213-262 (315)
57 2i75_A Tyrosine-protein phosph 99.1 4.1E-10 1.4E-14 81.8 7.4 50 84-133 209-259 (320)
58 2ooq_A Receptor-type tyrosine- 99.0 2.9E-10 9.9E-15 81.4 6.2 51 84-134 184-235 (286)
59 1g4w_R Protein tyrosine phosph 99.0 1.7E-10 5.8E-15 85.7 4.5 58 78-135 271-338 (383)
60 1yfo_A D1, receptor protein ty 99.0 3.8E-10 1.3E-14 81.4 6.2 51 84-134 197-248 (302)
61 2bzl_A Tyrosine-protein phosph 99.0 6.1E-10 2.1E-14 81.1 7.3 51 84-134 214-275 (325)
62 4ge6_A Tyrosine-protein phosph 99.0 1.7E-10 5.8E-15 83.6 3.8 54 81-134 189-256 (314)
63 2oc3_A Tyrosine-protein phosph 99.0 5.8E-10 2E-14 80.4 6.6 49 84-132 198-247 (303)
64 1zc0_A Tyrosine-protein phosph 99.0 3E-10 1E-14 82.1 5.0 51 84-134 203-256 (309)
65 2i1y_A Receptor-type tyrosine- 99.0 3.3E-10 1.1E-14 81.7 5.0 51 84-134 196-247 (301)
66 1l8k_A T-cell protein-tyrosine 99.0 6.4E-10 2.2E-14 80.6 6.3 50 84-133 179-231 (314)
67 2cm2_A Tyrosine-protein phosph 99.0 8.1E-10 2.8E-14 79.7 6.7 49 84-132 184-235 (304)
68 2cjz_A Human protein tyrosine 99.0 9.1E-10 3.1E-14 79.5 6.9 51 84-134 200-254 (305)
69 3s3e_A Tyrosine-protein phosph 99.0 9.5E-10 3.3E-14 79.5 6.7 51 84-134 207-258 (307)
70 2h4v_A Receptor-type tyrosine- 98.9 1.1E-09 3.7E-14 79.6 5.6 49 83-134 217-269 (320)
71 2b3o_A Tyrosine-protein phosph 98.9 3.3E-09 1.1E-13 81.8 7.6 51 84-134 416-469 (532)
72 4i8n_A Tyrosine-protein phosph 98.9 2.2E-09 7.4E-14 79.0 6.2 50 84-133 212-264 (354)
73 1lyv_A Protein-tyrosine phosph 98.9 4.3E-09 1.5E-13 76.0 7.2 52 83-134 190-257 (306)
74 2shp_A SHP-2, SYP, SHPTP-2; ty 98.9 5.2E-09 1.8E-13 80.5 7.3 51 84-134 422-475 (525)
75 1lar_A Protein (LAR); tyrosine 98.9 5.9E-09 2E-13 81.1 7.5 51 84-134 470-523 (575)
76 3ps5_A Tyrosine-protein phosph 98.8 5.3E-09 1.8E-13 81.6 6.9 52 83-134 415-469 (595)
77 2jjd_A Receptor-type tyrosine- 98.8 6.9E-09 2.4E-13 81.1 7.5 51 84-134 489-541 (599)
78 1lar_A Protein (LAR); tyrosine 98.8 8.6E-09 3E-13 80.2 6.9 51 84-134 181-232 (575)
79 1ygr_A CD45 protein tyrosine p 98.8 6.4E-09 2.2E-13 81.4 5.8 51 84-134 501-562 (610)
80 2jjd_A Receptor-type tyrosine- 98.8 1.3E-08 4.4E-13 79.5 6.9 52 82-133 193-245 (599)
81 1ygr_A CD45 protein tyrosine p 98.7 4.2E-09 1.4E-13 82.4 3.3 52 83-134 194-246 (610)
82 2nlk_A Protein tyrosine phosph 98.6 3.7E-08 1.3E-12 77.3 5.5 49 83-134 199-251 (627)
83 2nlk_A Protein tyrosine phosph 98.6 7E-08 2.4E-12 75.8 6.0 49 84-134 493-542 (627)
84 1ohe_A CDC14B, CDC14B2 phospha 96.5 0.005 1.7E-07 45.1 5.6 49 86-135 49-104 (348)
85 1vee_A Proline-rich protein fa 95.9 0.029 1E-06 35.0 6.3 19 109-128 72-90 (134)
86 2yf0_A Myotubularin-related pr 95.8 0.017 5.8E-07 44.3 5.6 24 109-132 327-350 (512)
87 1zsq_A Myotubularin-related pr 95.4 0.033 1.1E-06 43.0 6.0 26 107-132 336-362 (528)
88 1lw3_A Myotubularin-related pr 94.9 0.053 1.8E-06 42.8 6.0 25 108-132 409-434 (657)
89 3i2v_A Adenylyltransferase and 94.6 0.06 2E-06 32.9 4.6 17 112-129 73-89 (127)
90 1gmx_A GLPE protein; transfera 94.0 0.14 4.7E-06 30.5 5.3 21 108-129 55-75 (108)
91 2fsx_A RV0390, COG0607: rhodan 93.7 0.088 3E-06 33.3 4.1 18 109-127 78-95 (148)
92 3d1p_A Putative thiosulfate su 93.5 0.059 2E-06 33.7 3.1 65 52-129 40-108 (139)
93 1tq1_A AT5G66040, senescence-a 91.9 0.062 2.1E-06 33.2 1.5 20 109-129 80-99 (129)
94 3g5j_A Putative ATP/GTP bindin 91.2 0.45 1.6E-05 29.0 5.0 19 109-128 86-106 (134)
95 3f4a_A Uncharacterized protein 90.8 0.26 9E-06 32.0 3.8 18 112-129 105-122 (169)
96 1urh_A 3-mercaptopyruvate sulf 90.5 0.24 8.2E-06 34.6 3.6 20 109-129 228-247 (280)
97 3sxu_A DNA polymerase III subu 90.4 0.6 2.1E-05 29.9 5.1 42 78-120 7-48 (150)
98 2jtq_A Phage shock protein E; 90.1 0.4 1.4E-05 27.0 3.7 20 109-129 39-58 (85)
99 3iwh_A Rhodanese-like domain p 89.2 0.4 1.4E-05 28.5 3.3 23 109-133 54-76 (103)
100 3foj_A Uncharacterized protein 86.4 0.54 1.9E-05 27.4 2.7 23 109-133 54-76 (100)
101 3eme_A Rhodanese-like domain p 86.4 0.74 2.5E-05 26.9 3.3 20 109-129 54-73 (103)
102 3flh_A Uncharacterized protein 85.3 0.72 2.5E-05 28.0 3.0 24 109-133 69-93 (124)
103 1t3k_A Arath CDC25, dual-speci 85.1 1.8 6.1E-05 27.4 4.9 59 53-129 44-103 (152)
104 1qxn_A SUD, sulfide dehydrogen 85.0 0.8 2.7E-05 28.5 3.1 19 109-128 80-98 (137)
105 2hhg_A Hypothetical protein RP 84.6 0.72 2.5E-05 28.5 2.8 19 109-128 84-102 (139)
106 3hix_A ALR3790 protein; rhodan 84.1 0.54 1.9E-05 27.8 2.0 19 108-127 49-67 (106)
107 2j6p_A SB(V)-AS(V) reductase; 83.7 6.1 0.00021 24.7 7.8 61 53-129 25-86 (152)
108 2k0z_A Uncharacterized protein 83.0 0.85 2.9E-05 27.1 2.5 55 54-128 18-72 (110)
109 3gk5_A Uncharacterized rhodane 82.8 0.9 3.1E-05 26.9 2.6 23 109-133 53-75 (108)
110 4f67_A UPF0176 protein LPG2838 81.8 1.5 5.3E-05 30.6 3.8 23 109-133 179-201 (265)
111 3olh_A MST, 3-mercaptopyruvate 81.5 1.4 4.7E-05 31.2 3.5 21 108-129 251-271 (302)
112 1rhs_A Sulfur-substituted rhod 81.3 1.5 5.3E-05 30.7 3.7 21 109-130 238-258 (296)
113 3trj_A Phosphoheptose isomeras 81.0 2.3 8E-05 28.2 4.4 33 95-130 30-62 (201)
114 1wv9_A Rhodanese homolog TT165 79.9 1.1 3.9E-05 25.6 2.3 16 112-128 54-69 (94)
115 2eg4_A Probable thiosulfate su 79.4 6.8 0.00023 26.2 6.4 18 111-128 61-78 (230)
116 1e0c_A Rhodanese, sulfurtransf 79.3 1.4 4.7E-05 30.4 2.9 20 109-129 221-240 (271)
117 1xmx_A Hypothetical protein VC 77.4 19 0.00064 26.4 8.8 96 34-133 9-106 (385)
118 1e0c_A Rhodanese, sulfurtransf 75.4 3.4 0.00012 28.4 4.0 33 94-129 66-99 (271)
119 3aay_A Putative thiosulfate su 74.8 2.3 7.8E-05 29.4 3.0 18 109-127 224-241 (277)
120 3ilm_A ALR3790 protein; rhodan 74.7 1 3.6E-05 28.1 1.1 24 108-133 53-76 (141)
121 3ics_A Coenzyme A-disulfide re 73.9 4.2 0.00014 31.3 4.5 19 109-128 539-557 (588)
122 1nvm_A HOA, 4-hydroxy-2-oxoval 73.2 11 0.00037 27.2 6.3 80 47-128 129-213 (345)
123 3nhv_A BH2092 protein; alpha-b 73.1 3.8 0.00013 25.5 3.4 21 109-129 70-91 (144)
124 1uar_A Rhodanese; sulfurtransf 73.1 1.6 5.4E-05 30.4 1.8 18 109-127 231-248 (285)
125 2eg4_A Probable thiosulfate su 72.3 2.6 8.8E-05 28.4 2.7 20 109-129 182-201 (230)
126 1urh_A 3-mercaptopyruvate sulf 71.2 4.1 0.00014 28.2 3.6 22 109-131 84-105 (280)
127 3gtx_A Organophosphorus hydrol 70.7 13 0.00044 26.8 6.2 38 82-121 159-196 (339)
128 3tn4_A Phosphotriesterase; lac 67.8 27 0.00091 25.5 7.4 18 45-62 90-107 (360)
129 3ntd_A FAD-dependent pyridine 67.8 6.6 0.00023 29.9 4.4 57 53-133 487-544 (565)
130 3hzu_A Thiosulfate sulfurtrans 67.7 2.5 8.7E-05 30.1 1.9 23 108-131 256-278 (318)
131 3aay_A Putative thiosulfate su 66.2 6.8 0.00023 26.9 3.9 18 109-126 75-92 (277)
132 3guw_A Uncharacterized protein 65.4 17 0.00058 25.1 5.7 31 96-126 108-138 (261)
133 1okg_A Possible 3-mercaptopyru 65.0 4.5 0.00015 29.6 2.8 18 111-129 246-263 (373)
134 2wlr_A Putative thiosulfate su 64.2 6.3 0.00022 29.1 3.5 21 109-130 356-376 (423)
135 3utn_X Thiosulfate sulfurtrans 62.4 2.8 9.7E-05 30.2 1.3 14 109-122 273-286 (327)
136 3op3_A M-phase inducer phospha 61.6 6 0.00021 26.7 2.8 17 113-130 126-143 (216)
137 3hzu_A Thiosulfate sulfurtrans 60.3 5.9 0.0002 28.2 2.7 20 108-127 108-127 (318)
138 3n70_A Transport activator; si 60.2 24 0.00082 21.5 5.3 34 95-128 8-41 (145)
139 1w2w_A 5-methylthioribose-1-ph 59.5 7.9 0.00027 26.2 3.0 12 110-121 173-184 (211)
140 3pnz_A Phosphotriesterase fami 59.3 8.8 0.0003 27.6 3.5 39 82-122 154-192 (330)
141 3cvj_A Putative phosphoheptose 58.9 15 0.00052 24.7 4.5 33 94-129 25-57 (243)
142 1whb_A KIAA0055; deubiqutinati 55.2 16 0.00054 22.9 3.9 12 112-123 88-99 (157)
143 2gwf_A Ubiquitin carboxyl-term 55.1 21 0.00072 22.4 4.4 12 112-123 93-104 (157)
144 3tg1_B Dual specificity protei 54.3 12 0.00043 23.4 3.2 12 111-122 93-104 (158)
145 3af5_A Putative uncharacterize 54.1 43 0.0015 26.3 6.8 35 94-129 406-440 (651)
146 3tp9_A Beta-lactamase and rhod 53.5 7.7 0.00026 29.0 2.4 19 109-128 425-443 (474)
147 2xbl_A Phosphoheptose isomeras 51.8 34 0.0012 21.8 5.2 33 94-129 31-63 (198)
148 2xk0_A Polycomb protein PCL; t 51.7 8.6 0.00029 21.1 1.8 14 109-122 17-30 (69)
149 1zzm_A Putative deoxyribonucle 51.5 21 0.00073 23.9 4.3 28 93-120 109-136 (259)
150 1yt8_A Thiosulfate sulfurtrans 51.3 14 0.00046 28.3 3.5 19 109-128 428-446 (539)
151 3co5_A Putative two-component 51.1 25 0.00086 21.3 4.3 33 95-127 11-43 (143)
152 1rhs_A Sulfur-substituted rhod 50.6 16 0.00056 25.4 3.6 22 109-131 90-113 (296)
153 3gg7_A Uncharacterized metallo 49.8 26 0.00088 24.1 4.5 28 94-121 100-128 (254)
154 2y1h_A Putative deoxyribonucle 49.7 20 0.00067 24.4 3.9 25 96-120 124-148 (272)
155 1tk9_A Phosphoheptose isomeras 49.6 29 0.00099 22.0 4.5 32 95-129 26-57 (188)
156 2vsw_A Dual specificity protei 49.2 5.8 0.0002 24.6 1.0 17 109-126 76-92 (153)
157 1x92_A APC5045, phosphoheptose 47.7 40 0.0014 21.6 5.0 32 95-129 29-60 (199)
158 3rcm_A TATD family hydrolase; 47.1 19 0.00066 25.2 3.6 28 94-121 110-137 (287)
159 3egl_A DEGV family protein; al 47.1 50 0.0017 23.0 5.7 70 51-131 5-82 (277)
160 3ovg_A Amidohydrolase; structu 47.0 18 0.00062 26.4 3.4 31 91-121 162-192 (363)
161 2a0u_A Initiation factor 2B; S 46.6 21 0.00071 26.4 3.7 12 110-121 177-188 (383)
162 3k2g_A Resiniferatoxin-binding 46.3 46 0.0016 24.2 5.5 25 95-119 187-211 (364)
163 1g5t_A COB(I)alamin adenosyltr 45.7 20 0.00068 23.8 3.3 22 108-129 25-46 (196)
164 1c25_A CDC25A; hydrolase, cell 45.7 21 0.00073 22.2 3.3 19 110-129 86-107 (161)
165 1t5o_A EIF2BD, translation ini 45.5 12 0.00041 27.3 2.3 13 109-121 145-157 (351)
166 2cw6_A Hydroxymethylglutaryl-C 45.4 73 0.0025 22.2 6.4 77 45-124 128-213 (298)
167 3iek_A Ribonuclease TTHA0252; 44.9 85 0.0029 23.1 6.9 38 92-130 196-233 (431)
168 1ryl_A Hypothetical protein YF 44.3 34 0.0012 22.0 4.1 25 93-117 140-164 (167)
169 4hcz_A PHD finger protein 1; p 43.8 14 0.00048 19.5 1.8 14 109-122 5-18 (58)
170 2dnm_A SRP46 splicing factor; 43.5 24 0.00083 19.9 3.1 29 31-59 14-44 (103)
171 3s2u_A UDP-N-acetylglucosamine 43.4 71 0.0024 22.7 6.2 85 45-134 24-114 (365)
172 2yvk_A Methylthioribose-1-phos 43.4 12 0.00042 27.5 2.1 13 109-121 172-184 (374)
173 4f25_A Polyadenylate-binding p 42.8 20 0.00068 21.0 2.7 29 31-59 6-36 (115)
174 4fxv_A ELAV-like protein 1; RN 42.7 25 0.00085 20.0 3.1 27 32-58 21-49 (99)
175 1qb0_A Protein (M-phase induce 41.2 26 0.00089 23.1 3.3 19 110-129 108-129 (211)
176 3tp9_A Beta-lactamase and rhod 40.9 58 0.002 24.2 5.5 19 104-122 319-337 (474)
177 3hcn_A Ferrochelatase, mitocho 40.8 49 0.0017 24.1 4.9 79 43-125 254-346 (359)
178 1hzm_A Dual specificity protei 40.4 6.4 0.00022 24.4 0.2 14 109-122 90-103 (154)
179 3k35_A NAD-dependent deacetyla 40.1 28 0.00096 25.0 3.5 32 94-125 27-58 (318)
180 1xwy_A DNAse TATD, deoxyribonu 39.1 36 0.0012 22.8 3.9 23 98-120 112-134 (264)
181 3ipw_A Hydrolase TATD family p 38.9 18 0.00062 26.0 2.4 34 92-125 148-182 (325)
182 3pki_A NAD-dependent deacetyla 38.6 30 0.001 25.3 3.4 32 94-125 27-58 (355)
183 1t9k_A Probable methylthioribo 38.1 15 0.00051 26.7 1.8 13 109-121 147-159 (347)
184 3l84_A Transketolase; TKT, str 38.0 47 0.0016 26.2 4.7 41 71-120 200-240 (632)
185 3d2w_A TAR DNA-binding protein 38.0 39 0.0013 18.7 3.4 30 30-59 11-42 (89)
186 1tvm_A PTS system, galactitol- 37.8 27 0.00094 20.7 2.7 18 112-129 22-39 (113)
187 2ouc_A Dual specificity protei 37.1 31 0.001 20.6 3.0 14 111-125 83-96 (142)
188 3czc_A RMPB; alpha/beta sandwi 37.0 15 0.00051 21.7 1.4 18 112-129 19-36 (110)
189 2ftp_A Hydroxymethylglutaryl-C 36.9 41 0.0014 23.6 4.0 48 75-125 170-219 (302)
190 1ydn_A Hydroxymethylglutaryl-C 36.8 71 0.0024 22.2 5.2 48 75-125 166-215 (295)
191 3gem_A Short chain dehydrogena 35.9 92 0.0031 20.9 5.5 65 45-121 45-109 (260)
192 3s5s_A Mandelate racemase/muco 35.8 30 0.001 25.3 3.2 34 97-130 277-312 (389)
193 3ik4_A Mandelate racemase/muco 35.6 27 0.00093 25.2 2.9 34 97-130 276-311 (365)
194 2xio_A Putative deoxyribonucle 35.1 34 0.0012 23.8 3.3 27 94-120 123-149 (301)
195 2a2k_A M-phase inducer phospha 34.9 37 0.0012 21.4 3.2 19 110-129 88-109 (175)
196 3r2u_A Metallo-beta-lactamase 34.8 8.2 0.00028 29.0 0.0 18 109-127 423-440 (466)
197 3ipw_A Hydrolase TATD family p 34.3 40 0.0014 24.2 3.6 25 98-122 180-204 (325)
198 1vp8_A Hypothetical protein AF 33.8 81 0.0028 21.1 4.6 75 46-125 38-114 (201)
199 2zad_A Muconate cycloisomerase 33.4 32 0.0011 24.5 3.0 33 96-128 270-304 (345)
200 4gfi_A Mandelate racemase/muco 32.9 30 0.001 24.5 2.7 32 97-128 255-288 (329)
201 2m0o_A PHD finger protein 1; t 32.9 18 0.00062 20.2 1.2 14 109-122 28-41 (79)
202 3ppi_A 3-hydroxyacyl-COA dehyd 32.9 93 0.0032 21.0 5.2 67 45-124 48-116 (281)
203 2mss_A Protein (musashi1); RNA 32.7 36 0.0012 17.8 2.5 18 32-49 1-18 (75)
204 2ycb_A Beta-CAsp RNAse, cleava 32.3 1.1E+02 0.0036 24.0 5.9 35 94-129 391-425 (636)
205 3md1_A Nuclear and cytoplasmic 32.1 47 0.0016 17.6 3.0 27 32-58 3-31 (83)
206 1j6o_A TATD-related deoxyribon 32.1 52 0.0018 22.3 3.8 26 95-120 117-142 (268)
207 3cl6_A PUUE allantoinase; URIC 32.0 1.3E+02 0.0044 20.9 6.7 83 41-128 170-269 (308)
208 1s79_A Lupus LA protein; RRM, 31.8 44 0.0015 19.2 2.9 29 31-59 12-42 (103)
209 3ex7_B RNA-binding protein 8A; 31.5 79 0.0027 18.4 5.2 28 32-59 24-53 (126)
210 3u9i_A Mandelate racemase/muco 31.3 35 0.0012 25.0 2.9 34 97-130 306-341 (393)
211 3q3v_A Phosphoglycerate kinase 30.9 67 0.0023 23.9 4.3 41 82-122 27-67 (403)
212 3s7r_A Heterogeneous nuclear r 30.8 60 0.0021 17.4 3.3 29 31-59 12-42 (87)
213 2i2w_A Phosphoheptose isomeras 30.8 63 0.0022 21.1 3.9 32 95-129 48-79 (212)
214 3gd6_A Muconate cycloisomerase 30.7 42 0.0014 24.5 3.2 32 97-128 275-308 (391)
215 1hjs_A Beta-1,4-galactanase; 4 30.7 86 0.0029 22.3 4.8 71 43-119 11-81 (332)
216 3rhg_A Putative phophotriester 30.5 1.2E+02 0.0042 21.9 5.7 29 93-121 174-204 (365)
217 2yva_A DNAA initiator-associat 30.5 92 0.0032 19.7 4.7 31 96-129 26-56 (196)
218 1nu5_A Chloromuconate cycloiso 30.4 37 0.0013 24.4 2.9 32 97-128 276-309 (370)
219 3he8_A Ribose-5-phosphate isom 30.3 68 0.0023 20.3 3.7 49 73-125 22-72 (149)
220 1b34_B Protein (small nuclear 30.1 51 0.0018 19.8 3.1 23 101-123 29-51 (118)
221 2p8b_A Mandelate racemase/muco 29.9 43 0.0015 24.0 3.2 32 97-128 274-307 (369)
222 1r6w_A OSB synthase, O-succiny 29.8 48 0.0016 23.4 3.4 32 97-128 244-277 (322)
223 1chr_A Chloromuconate cycloiso 29.4 54 0.0018 23.6 3.6 32 97-128 276-309 (370)
224 2okt_A OSB synthetase, O-succi 29.4 28 0.00095 24.9 2.0 33 98-130 252-286 (342)
225 2ob3_A Parathion hydrolase; me 29.4 64 0.0022 22.8 4.0 26 94-119 144-169 (330)
226 3ro6_B Putative chloromuconate 29.4 41 0.0014 24.2 3.0 32 97-128 273-306 (356)
227 3ijl_A Muconate cycloisomerase 29.3 37 0.0013 24.2 2.7 31 97-127 260-292 (338)
228 3ph3_A Ribose-5-phosphate isom 29.1 72 0.0024 20.7 3.7 50 72-125 41-92 (169)
229 2bjv_A PSP operon transcriptio 28.7 1.2E+02 0.0041 20.2 5.2 34 95-128 13-46 (265)
230 2pge_A MENC; OSBS, NYSGXRC, PS 28.4 51 0.0017 23.8 3.4 32 97-128 298-331 (377)
231 1yix_A Deoxyribonuclease YCFH; 28.4 67 0.0023 21.4 3.8 23 98-120 111-133 (265)
232 1wf0_A TDP-43, TAR DNA-binding 28.4 44 0.0015 18.1 2.5 19 31-49 6-24 (88)
233 1x4e_A RNA binding motif, sing 28.1 67 0.0023 17.1 3.2 28 31-58 6-35 (85)
234 1tkk_A Similar to chloromucona 28.0 41 0.0014 24.2 2.8 32 97-128 275-308 (366)
235 3a11_A Translation initiation 27.9 25 0.00087 25.4 1.6 12 109-120 140-151 (338)
236 3q45_A Mandelate racemase/muco 27.5 47 0.0016 24.0 3.0 32 97-128 272-305 (368)
237 3lqv_A PRE-mRNA branch site pr 27.2 78 0.0027 18.1 3.5 23 27-49 5-27 (115)
238 1o1x_A Ribose-5-phosphate isom 27.1 82 0.0028 20.1 3.7 50 72-125 33-84 (155)
239 1iqt_A AUF1, heterogeneous nuc 27.0 47 0.0016 17.2 2.4 18 32-49 1-18 (75)
240 2ps2_A Putative mandelate race 26.9 54 0.0019 23.6 3.3 31 97-127 276-308 (371)
241 2rdx_A Mandelate racemase/muco 26.9 57 0.002 23.5 3.4 47 77-129 260-308 (379)
242 1xu9_A Corticosteroid 11-beta- 26.8 1.2E+02 0.0043 20.4 5.0 28 95-123 91-118 (286)
243 3nco_A Endoglucanase fncel5A; 26.8 1.6E+02 0.0054 20.3 6.0 20 97-116 81-100 (320)
244 2e5g_A U6 snRNA-specific termi 26.7 64 0.0022 17.7 3.0 28 31-58 9-38 (94)
245 2cqd_A RNA-binding region cont 26.6 93 0.0032 17.8 3.8 30 30-59 17-48 (116)
246 3p19_A BFPVVD8, putative blue 26.5 1.2E+02 0.004 20.5 4.8 64 45-121 34-97 (266)
247 2d9p_A Polyadenylate-binding p 26.5 78 0.0027 17.6 3.4 28 31-58 16-45 (103)
248 2dnq_A RNA-binding protein 4B; 26.5 68 0.0023 17.4 3.1 19 31-49 9-27 (90)
249 2dgs_A DAZ-associated protein 26.5 87 0.003 17.2 4.4 29 31-59 11-41 (99)
250 1why_A Hypothetical protein ri 26.2 70 0.0024 17.6 3.1 28 31-58 18-47 (97)
251 2fym_A Enolase; RNA degradosom 26.1 1.5E+02 0.0052 21.9 5.6 35 97-131 348-385 (431)
252 3r0u_A Enzyme of enolase super 26.1 57 0.0019 23.7 3.2 32 97-128 276-309 (379)
253 1zo0_A ODC-AZ, ornithine decar 25.7 1.2E+02 0.0041 18.6 6.1 51 77-128 44-94 (126)
254 1x4c_A Splicing factor, argini 25.7 59 0.002 18.5 2.7 20 30-49 15-34 (108)
255 2dnz_A Probable RNA-binding pr 25.6 83 0.0028 17.1 3.4 29 31-59 6-36 (95)
256 3pdw_A Uncharacterized hydrola 25.6 1.5E+02 0.005 19.5 6.9 50 78-129 6-55 (266)
257 2cq1_A PTB-like protein L; RRM 25.6 94 0.0032 17.7 3.6 29 30-58 15-45 (101)
258 2hzc_A Splicing factor U2AF 65 25.5 60 0.002 17.3 2.7 20 30-49 6-25 (87)
259 2dnh_A Bruno-like 5, RNA bindi 25.5 82 0.0028 17.6 3.4 30 30-59 15-46 (105)
260 3dgb_A Muconate cycloisomerase 25.5 51 0.0018 23.9 2.9 33 97-129 282-316 (382)
261 3u0b_A Oxidoreductase, short c 25.4 2E+02 0.0069 21.3 6.2 67 45-120 231-297 (454)
262 2cq4_A RNA binding motif prote 25.4 1E+02 0.0034 17.6 4.5 28 32-59 27-56 (114)
263 1x4h_A RNA-binding protein 28; 25.4 97 0.0033 17.4 4.1 29 31-59 16-46 (111)
264 4e8g_A Enolase, mandelate race 25.3 64 0.0022 23.6 3.4 31 97-127 295-327 (391)
265 2p10_A MLL9387 protein; putati 25.3 1.5E+02 0.005 21.0 5.0 72 46-123 158-238 (286)
266 2rs2_A Musashi-1, RNA-binding 25.2 1E+02 0.0035 17.6 4.8 29 31-59 26-56 (109)
267 2cpf_A RNA binding motif prote 25.1 75 0.0025 17.5 3.1 28 31-58 6-35 (98)
268 3s5p_A Ribose 5-phosphate isom 25.1 64 0.0022 20.9 2.9 49 73-125 43-93 (166)
269 1ydo_A HMG-COA lyase; TIM-barr 25.0 1.2E+02 0.0041 21.3 4.7 81 45-128 129-220 (307)
270 2vc7_A Aryldialkylphosphatase; 24.8 1.1E+02 0.0037 21.0 4.4 20 100-119 153-172 (314)
271 1wg1_A KIAA1579 protein, homol 24.7 58 0.002 17.7 2.5 19 31-49 6-24 (88)
272 1umd_A E1-alpha, 2-OXO acid de 24.6 1.5E+02 0.0052 21.3 5.3 44 71-119 223-266 (367)
273 3ozy_A Putative mandelate race 24.3 39 0.0013 24.7 2.1 32 97-128 284-316 (389)
274 2cjk_A Nuclear polyadenylated 24.3 1.2E+02 0.0042 18.2 4.8 29 31-59 4-34 (167)
275 2l82_A Designed protein OR32; 24.2 63 0.0021 19.5 2.6 37 45-81 20-56 (162)
276 3s8s_A Histone-lysine N-methyl 24.1 89 0.003 18.0 3.4 28 32-59 8-37 (110)
277 2cqh_A IGF-II mRNA-binding pro 24.1 59 0.002 17.8 2.5 19 31-49 9-27 (93)
278 3dip_A Enolase; structural gen 24.1 59 0.002 23.9 3.0 32 97-128 302-333 (410)
279 4a3s_A 6-phosphofructokinase; 24.0 2E+02 0.0068 20.5 6.2 42 45-89 87-129 (319)
280 4a8x_A RNA-binding protein wit 23.9 81 0.0028 16.8 3.0 29 31-59 5-35 (88)
281 3bs9_A Nucleolysin TIA-1 isofo 23.8 69 0.0024 17.1 2.7 18 32-49 8-25 (87)
282 3ns6_A Eukaryotic translation 23.8 91 0.0031 17.4 3.3 29 31-59 7-43 (100)
283 1okg_A Possible 3-mercaptopyru 23.7 92 0.0032 22.5 4.0 21 109-130 93-114 (373)
284 1bf6_A Phosphotriesterase homo 23.7 90 0.0031 21.0 3.8 23 98-120 138-160 (291)
285 1uaw_A Mouse-musashi-1; RNP-ty 23.7 51 0.0017 17.1 2.1 18 32-49 2-19 (77)
286 2do4_A Squamous cell carcinoma 23.6 91 0.0031 17.2 3.3 29 31-59 18-48 (100)
287 4hnl_A Mandelate racemase/muco 23.6 1.1E+02 0.0037 22.5 4.4 28 97-124 309-336 (421)
288 1x5u_A Splicing factor 3B subu 23.5 1E+02 0.0036 17.1 4.3 29 31-59 16-46 (105)
289 2do0_A HnRNP M, heterogeneous 23.4 95 0.0033 17.6 3.4 29 30-58 15-45 (114)
290 2khc_A Testis-specific RNP-typ 23.3 1.1E+02 0.0039 17.4 4.6 29 31-59 41-71 (118)
291 3fv9_G Mandelate racemase/muco 23.1 79 0.0027 23.0 3.5 32 97-128 280-313 (386)
292 3eez_A Putative mandelate race 22.8 82 0.0028 22.8 3.6 32 97-128 274-307 (378)
293 1uas_A Alpha-galactosidase; TI 22.8 1.8E+02 0.0061 20.8 5.3 76 45-123 81-167 (362)
294 2dgv_A HnRNP M, heterogeneous 22.7 83 0.0028 17.0 3.0 19 31-49 9-27 (92)
295 3jx9_A Putative phosphoheptose 22.6 1E+02 0.0035 19.8 3.7 24 96-119 23-46 (170)
296 1pfk_A Phosphofructokinase; tr 22.5 1.3E+02 0.0046 21.4 4.5 40 46-88 89-129 (320)
297 2cq0_A Eukaryotic translation 22.5 93 0.0032 17.3 3.2 28 31-58 16-45 (103)
298 1vb5_A Translation initiation 22.5 37 0.0012 23.7 1.6 13 109-121 108-120 (276)
299 2cq3_A RNA-binding protein 9; 22.5 86 0.0029 17.4 3.0 28 31-58 16-45 (103)
300 2lkz_A RNA-binding protein 5; 22.3 70 0.0024 18.0 2.6 21 29-49 8-28 (95)
301 4egf_A L-xylulose reductase; s 22.2 1.8E+02 0.0062 19.4 5.2 68 45-121 38-108 (266)
302 2cph_A RNA binding motif prote 22.1 90 0.0031 17.4 3.1 29 31-59 16-46 (107)
303 3o26_A Salutaridine reductase; 22.0 1.3E+02 0.0046 20.2 4.5 70 45-122 30-102 (311)
304 1wex_A Hypothetical protein (r 21.7 1.2E+02 0.0042 17.3 3.6 28 31-58 16-45 (104)
305 3ucg_A Polyadenylate-binding p 21.7 79 0.0027 16.9 2.7 19 31-49 7-25 (89)
306 3ecs_A Translation initiation 21.6 21 0.00073 25.5 0.2 13 109-121 120-132 (315)
307 3i6e_A Muconate cycloisomerase 21.6 78 0.0027 23.0 3.2 32 97-128 280-313 (385)
308 2ku7_A MLL1 PHD3-CYP33 RRM chi 21.6 1.3E+02 0.0044 17.6 3.9 29 30-58 63-93 (140)
309 4f02_A Polyadenylate-binding p 21.6 75 0.0026 20.6 2.9 29 30-58 15-45 (213)
310 3i4k_A Muconate lactonizing en 21.5 77 0.0026 23.0 3.2 32 97-128 282-315 (383)
311 2vqe_B 30S ribosomal protein S 21.5 98 0.0034 21.4 3.5 28 92-119 46-73 (256)
312 2cqc_A Arginine/serine-rich sp 21.5 1E+02 0.0034 16.7 3.1 28 31-58 16-45 (95)
313 2ytc_A PRE-mRNA-splicing facto 21.4 1E+02 0.0035 16.3 4.0 29 30-58 12-42 (85)
314 1x4d_A Matrin 3; structural ge 21.4 66 0.0022 18.6 2.3 28 31-58 16-46 (102)
315 2gzx_A Putative TATD related D 21.2 1.1E+02 0.0038 20.2 3.8 26 96-121 107-132 (265)
316 3p5t_L Cleavage and polyadenyl 21.2 60 0.0021 17.7 2.1 18 32-49 3-20 (90)
317 3e2v_A 3'-5'-exonuclease; stru 21.2 62 0.0021 24.0 2.6 31 92-122 173-207 (401)
318 4etn_A LMPTP, low molecular we 21.2 81 0.0028 20.5 3.0 20 111-130 34-53 (184)
319 4e4u_A Mandalate racemase/muco 21.2 49 0.0017 24.4 2.1 32 97-128 289-321 (412)
320 4dye_A Isomerase; enolase fami 21.0 1.3E+02 0.0045 22.0 4.4 31 97-127 298-330 (398)
321 2qde_A Mandelate racemase/muco 21.0 68 0.0023 23.4 2.8 32 97-128 277-310 (397)
322 1x5o_A RNA binding motif, sing 20.9 1.1E+02 0.0038 17.3 3.4 28 31-58 26-55 (114)
323 4egs_A Ribose 5-phosphate isom 20.9 83 0.0028 20.3 3.0 21 111-131 34-54 (180)
324 2j76_E EIF-4B, EIF4B, eukaryot 20.8 73 0.0025 17.8 2.5 28 31-59 20-49 (100)
325 1ojl_A Transcriptional regulat 20.8 1.5E+02 0.0052 20.5 4.5 33 95-127 9-41 (304)
326 2ox4_A Putative mandelate race 20.8 50 0.0017 24.0 2.1 23 97-119 297-319 (403)
327 2cqg_A TDP-43, TAR DNA-binding 20.7 87 0.003 17.4 2.8 19 31-49 16-34 (103)
328 2dgt_A RNA-binding protein 30; 20.7 76 0.0026 17.3 2.5 19 31-49 11-29 (92)
329 3oig_A Enoyl-[acyl-carrier-pro 20.6 1.9E+02 0.0066 19.1 5.4 72 44-122 26-98 (266)
330 2fc8_A NCL protein; structure 20.6 77 0.0026 17.6 2.6 20 30-49 15-34 (102)
331 1kcz_A Beta-methylaspartase; b 20.6 1.7E+02 0.0059 21.4 5.0 24 97-120 338-361 (413)
332 2e5h_A Zinc finger CCHC-type a 20.6 1.1E+02 0.0039 16.4 4.5 29 31-59 17-47 (94)
333 1wue_A Mandelate racemase/muco 20.6 84 0.0029 22.7 3.2 34 97-130 289-324 (386)
334 3qld_A Mandelate racemase/muco 20.5 85 0.0029 22.9 3.2 34 97-130 277-312 (388)
335 2x1f_A MRNA 3'-END-processing 20.5 1.2E+02 0.004 16.6 4.6 29 31-59 3-33 (96)
336 2wja_A Putative acid phosphata 20.5 91 0.0031 19.9 3.1 19 112-130 27-45 (168)
337 2fek_A Low molecular weight pr 20.5 94 0.0032 19.8 3.1 19 112-130 23-41 (167)
338 2poz_A Putative dehydratase; o 20.4 48 0.0016 24.1 1.9 24 97-120 287-310 (392)
339 1whw_A Hypothetical protein ri 20.3 1.2E+02 0.0041 16.6 4.2 28 32-59 10-39 (99)
340 3end_A Light-independent proto 20.3 75 0.0026 21.8 2.8 18 110-127 40-57 (307)
341 2e18_A NH(3)-dependent NAD(+) 20.3 1.6E+02 0.0053 19.9 4.4 34 94-129 7-40 (257)
342 3sqn_A Conserved domain protei 20.2 76 0.0026 23.9 3.0 29 100-128 382-415 (485)
343 2dnp_A RNA-binding protein 14; 20.2 80 0.0027 17.1 2.5 19 31-49 10-28 (90)
344 2ywk_A Putative RNA-binding pr 20.1 88 0.003 17.0 2.7 29 30-58 16-46 (95)
345 2o56_A Putative mandelate race 20.1 49 0.0017 24.2 1.9 23 97-119 303-325 (407)
346 2jvr_A Nucleolar protein 3; RN 20.0 77 0.0026 18.5 2.5 18 32-49 30-47 (111)
347 3pgw_S U1-70K; protein-RNA com 20.0 1.4E+02 0.0049 22.1 4.4 19 31-49 103-121 (437)
348 3jva_A Dipeptide epimerase; en 20.0 2.4E+02 0.0082 20.1 5.5 32 97-128 271-305 (354)
No 1
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=99.97 E-value=8.5e-31 Score=172.77 Aligned_cols=111 Identities=52% Similarity=0.978 Sum_probs=98.3
Q ss_pred ccccccCcEEEeCCCCcccHHHH-HhcCCCEEEEcccCccc-ccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHH
Q psy7473 25 WYDRIDENIILGALPFKRLTNKL-LEENVKGVVSMNEDYEL-YFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVD 102 (136)
Q Consensus 25 ~~~~i~~~l~~g~~~~~~~~~~l-~~~gi~~Vi~l~~~~~~-~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~ 102 (136)
|+++|.|+||+|+.+.+.+...+ +++||++|||++.+.+. ......+.+...|++|+++|+.|....+..+.+.++++
T Consensus 1 wf~~I~~~l~~g~~~~~~~~~~ll~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~~~~~~~~~~~~~~~ 80 (157)
T 3rgo_A 1 WYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQ 80 (157)
T ss_dssp CEEECSSSEEEESCCCGGGHHHHHHHSCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTTTSSCCHHHHHHHHH
T ss_pred CcccccCCeEEecCcCccchHHHHHHcCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCCCCCChHHHHHHHHH
Confidence 89999999999999998877666 88999999999988764 22223556667899999999999876888999999999
Q ss_pred HHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 103 FIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 103 ~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+|++..++|++|||||.+|+||||+++++|||+
T Consensus 81 ~i~~~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~ 113 (157)
T 3rgo_A 81 FALKYQALGQCVYVHCKAGRSRSATMVAAYLIQ 113 (157)
T ss_dssp HHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEECCCCCChHHHHHHHHHHH
Confidence 999999999999999999999999999999996
No 2
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=99.97 E-value=2.5e-30 Score=171.76 Aligned_cols=104 Identities=16% Similarity=0.174 Sum_probs=91.2
Q ss_pred CccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHH
Q psy7473 24 RWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDF 103 (136)
Q Consensus 24 ~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~ 103 (136)
..+++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+. ....+++|+++|+.|...++..+.++++++|
T Consensus 8 ~~~~~I~~~LylG~~~~a~~~~~L~~~gIt~Vlnl~~~~~~--------~~~~~~~~~~ipi~D~~~~~l~~~~~~~~~f 79 (161)
T 3emu_A 8 LSPTQIIQYIHLGSFLNAHNVDYIHNNNISSILLVGIEVPS--------LFKDQCDILRLDIVSEEGHQLYDSIPNAIKF 79 (161)
T ss_dssp GSCEEEETTEEEEETTGGGCHHHHHHTTEEEEEEEC---------------CTTSEEEEECCCCSSTTHHHHHHHHHHHH
T ss_pred CCceEEECCEEECChHHhhCHHHHHHCCCCEEEEeCCCCcc--------ccCCCCEEEEEeCcCCCCCcHHHHHHHHHHH
Confidence 45899999999999999999999999999999999976431 1235899999999998877788889999999
Q ss_pred HHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 104 IQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 104 i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
|+++.++|++|||||.+|+|||+++++||||+
T Consensus 80 I~~~~~~~~~VlVHC~~G~sRS~~vv~ayLm~ 111 (161)
T 3emu_A 80 IIRSIQRKEGVLIISGTGVNKAPAIVIAFLMY 111 (161)
T ss_dssp HHHHHHTTCEEEEEESSSSSHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEcCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999996
No 3
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=99.96 E-value=5.4e-30 Score=167.16 Aligned_cols=102 Identities=22% Similarity=0.277 Sum_probs=92.6
Q ss_pred cccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHH
Q psy7473 26 YDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQ 105 (136)
Q Consensus 26 ~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~ 105 (136)
.++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+. ....+++|+++|+.|...++..+.++++++||+
T Consensus 4 ~~~I~~~LylG~~~~a~~~~~L~~~gI~~Vl~l~~~~~~--------~~~~~~~~~~ipi~D~~~~~~~~~~~~~~~fi~ 75 (144)
T 3s4e_A 4 VGVIKPWLLLGSQDAAHDLDTLKKNKVTHILNVAYGVEN--------AFLSDFTYKSISILDLPETNILSYFPECFEFIE 75 (144)
T ss_dssp CEEEETTEEEECHHHHTCHHHHHHTTCCEEEECSSSCCC--------CCTTTSEEEECCCCCCTTSCGGGGHHHHHHHHH
T ss_pred hhEEcCCEEECChhHhCCHHHHHHcCCCEEEEccCCCCC--------CCCCCCEEEEEeccCCCCCchHHHHHHHHHHHH
Confidence 578999999999999999999999999999999986441 123589999999999887888899999999999
Q ss_pred HHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 106 RISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 106 ~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
++.++|++|||||.+|+|||+++++||||+
T Consensus 76 ~~~~~~~~VlVHC~~G~sRS~~~v~ayLm~ 105 (144)
T 3s4e_A 76 EAKRKDGVVLVHSNAGVSRAAAIVIGFLMN 105 (144)
T ss_dssp HHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence 999999999999999999999999999996
No 4
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=99.96 E-value=3.9e-30 Score=167.77 Aligned_cols=103 Identities=19% Similarity=0.223 Sum_probs=93.4
Q ss_pred ccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHH
Q psy7473 25 WYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI 104 (136)
Q Consensus 25 ~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i 104 (136)
.|++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+. ....+++|+++|+.|...++..+.++++++||
T Consensus 3 ~p~~I~~~lylg~~~~a~~~~~L~~~gI~~Vi~l~~~~~~--------~~~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i 74 (144)
T 3ezz_A 3 GPVEILPFLYLGSAYHAARRDMLDALGITALLNVSSDCPN--------HFEGHYQYKCIPVEDNHKADISSWFMEAIEYI 74 (144)
T ss_dssp CCEEEETTEEEEEHHHHTCHHHHHHTTCCEEEECSSSCCC--------TTTTTSEEEECCCCSSSSCCTTTTHHHHHHHH
T ss_pred CcceeeCCEEECChhhcCCHHHHHHCCCeEEEEccCCCCc--------cCCCCceEEEEEcccCCCCChHHHHHHHHHHH
Confidence 4789999999999999999999999999999999986531 12357999999999998777789999999999
Q ss_pred HHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 105 QRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 105 ~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
++..+++++|||||.+|+||||++++||||+
T Consensus 75 ~~~~~~~~~VlVHC~~G~~RS~~~~~aylm~ 105 (144)
T 3ezz_A 75 DAVKDCRGRVLVHSQAGISRSATICLAYLMM 105 (144)
T ss_dssp HHHHHTTCCEEEEESSSSSHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEECCCCCChhHHHHHHHHHH
Confidence 9999999999999999999999999999996
No 5
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=99.96 E-value=3.9e-29 Score=163.83 Aligned_cols=106 Identities=24% Similarity=0.315 Sum_probs=93.7
Q ss_pred CccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHH
Q psy7473 24 RWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDF 103 (136)
Q Consensus 24 ~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~ 103 (136)
..+++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+ .......|++|+++|+.|...++..+.++++++|
T Consensus 2 ~~~~~I~~~ly~g~~~~~~d~~~L~~~gi~~Vi~l~~e~p------~~~~~~~~~~~~~ipi~D~~~~~~~~~~~~~~~~ 75 (149)
T 1zzw_A 2 AELTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLP------LYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEF 75 (149)
T ss_dssp CCCEEEETTEEEECTTGGGCHHHHHHTTEEEEEECCSSSC------CTTGGGTCSEEEECCCCCSSSCCCHHHHHHHHHH
T ss_pred CCceEeeCCeEECChhHhhCHHHHHHCCCcEEEEecCCCC------CcccCCCCeEEEEEECCCCCcccHHHHHHHHHHH
Confidence 3578999999999999999999999999999999987543 1123467999999999998767777889999999
Q ss_pred HHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 104 IQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 104 i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
|++..+.+++|||||.+|+||||++++||||+
T Consensus 76 i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl~~ 107 (149)
T 1zzw_A 76 IEEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 107 (149)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 99999889999999999999999999999995
No 6
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=99.96 E-value=2e-29 Score=170.33 Aligned_cols=111 Identities=25% Similarity=0.395 Sum_probs=97.7
Q ss_pred ccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCccc-ccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHH
Q psy7473 25 WYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYEL-YFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDF 103 (136)
Q Consensus 25 ~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~-~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~ 103 (136)
-+++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+. ......+.+...|++|+++|+.|...++..+.+.+++++
T Consensus 27 ~~~~I~p~Lylg~~~~a~d~~~L~~~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~~ip~~D~~~~~~~~~~~~~~~~ 106 (183)
T 3f81_A 27 PCNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQEFNLSAYFERAADF 106 (183)
T ss_dssp SEEEEETTEEEECHHHHTCHHHHHHHTCCEEEETTBSSSTTSBCCCTGGGTTTTCEEEECCCCCSTTSCGGGGHHHHHHH
T ss_pred CcceEeCCEEECCchhhhCHHHHHHCCCcEEEECCCCccccccccchhhcccCCCEEEEEEcCCCCcccHHHHHHHHHHH
Confidence 3889999999999999999999999999999999987652 112234455668999999999999877778899999999
Q ss_pred HHHHHHc-CCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 104 IQRISKT-GGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 104 i~~~~~~-~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
|++..++ +++|||||.+|+||||++++||||+
T Consensus 107 i~~~~~~~~~~VlVHC~~G~~RSg~~v~ayLm~ 139 (183)
T 3f81_A 107 IDQALAQKNGRVLVHCREGYSRSPTLVIAYLMM 139 (183)
T ss_dssp HHHHHHSTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEECCCCcchHHHHHHHHHHH
Confidence 9999987 8999999999999999999999996
No 7
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=99.96 E-value=2.1e-29 Score=166.31 Aligned_cols=106 Identities=20% Similarity=0.276 Sum_probs=92.7
Q ss_pred CCccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhc-CCeEEEeeCCCCCCCchHHHHHHHH
Q psy7473 23 RRWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKV-GVEFLQLSTRDIFDTPDQDKLERGV 101 (136)
Q Consensus 23 ~~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~-~i~~~~~p~~D~~~~~~~~~~~~~~ 101 (136)
..+|++|.|+||+|+.+.+.+.+.|++.||++|||++.+.+ ..+... +++|+++|+.|...++..+.+++++
T Consensus 3 ~~~p~~I~~~lylg~~~~~~d~~~L~~~gI~~Vi~l~~~~~-------~~~~~~~~i~~~~ipi~D~~~~~l~~~~~~~~ 75 (155)
T 2hxp_A 3 ASFPVQILPNLYLGSARDSANLESLAKLGIRYILNVTPNLP-------NFFEKNGDFHYKQIPISDHWSQNLSRFFPEAI 75 (155)
T ss_dssp -CCCEEEETTEEEECTTGGGCHHHHHHTTEEEEEECSSSCC-------CTTTTCTTCEEEECCCCGGGGGGHHHHHHHHH
T ss_pred CCCCeEEECCEEECChhhhcCHHHHHHCCCCEEEEeCCCCc-------ccccCCCCeEEEEEECccCCCCCHHHHHHHHH
Confidence 45789999999999999999999999999999999998643 223344 4999999999987566667799999
Q ss_pred HHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 102 DFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 102 ~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+||++..+++++|||||.+|+||||++++||||+
T Consensus 76 ~fi~~~~~~~~~VlVHC~~G~~RS~~vv~ayLm~ 109 (155)
T 2hxp_A 76 EFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQ 109 (155)
T ss_dssp HHHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCchhHHHHHHHHHH
Confidence 9999999889999999999999999999999996
No 8
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=99.96 E-value=5.8e-29 Score=163.78 Aligned_cols=112 Identities=23% Similarity=0.290 Sum_probs=94.1
Q ss_pred cCCCccccccCcEEEeCCCCc--ccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHH
Q psy7473 21 TSRRWYDRIDENIILGALPFK--RLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLE 98 (136)
Q Consensus 21 ~~~~~~~~i~~~l~~g~~~~~--~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~ 98 (136)
+.++++++|.|+||+|+.+.+ .+.+.|+++||++|||++.+.+.... .+. ...+++|+++|+.|.+.++..+.+.
T Consensus 1 ~~r~~~~~I~~~lylG~~~~~~~~d~~~L~~~gI~~Vi~l~~~~e~~~~--~~~-~~~~~~~~~ip~~d~~~~~l~~~~~ 77 (154)
T 2r0b_A 1 SLRREMQEILPGLFLGPYSSAMKSKLPVLQKHGITHIICIRQNIEANFI--KPN-FQQLFRYLVLDIADNPVENIIRFFP 77 (154)
T ss_dssp --CCSCEEEETTEEEECGGGGSGGGHHHHHHTTCCEEEEEECGGGTTTS--SCC-CTTTSEEEEEECCSSTTSCCGGGHH
T ss_pred CCCcchheEeCCeEECCHHHhhhccHHHHHHcCCeEEEEeCCccccccC--CCC-CcCceeEEEEECCCCCcccHHHHHH
Confidence 357889999999999999877 57788999999999999987653110 111 1368999999999987667778899
Q ss_pred HHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 99 RGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 99 ~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
++++||++..+.+++|||||.+|+||||++++||||+
T Consensus 78 ~~~~~i~~~~~~~~~vlvHC~aG~~RS~~~~~ayl~~ 114 (154)
T 2r0b_A 78 MTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIME 114 (154)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCChHHHHHHHHHHH
Confidence 9999999999889999999999999999999999985
No 9
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=99.96 E-value=9.9e-29 Score=166.33 Aligned_cols=107 Identities=23% Similarity=0.313 Sum_probs=94.9
Q ss_pred CCccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHH
Q psy7473 23 RRWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVD 102 (136)
Q Consensus 23 ~~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~ 102 (136)
.+.+++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+ .......|++|+++|+.|...++..+.+.++++
T Consensus 5 ~~~~~~I~p~LylG~~~~a~d~~~L~~~gI~~Vi~l~~e~p------~~~~~~~~i~~~~ipi~D~~~~~l~~~~~~~~~ 78 (177)
T 2oud_A 5 NAELTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLP------LYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFE 78 (177)
T ss_dssp SCCCEEEETTEEEECTTTTTCHHHHHHTTEEEEEECCSSSC------CTTTTTTCSEEEECCCCCCSSCCCHHHHHHHHH
T ss_pred CCCCeEEECCEEEcChhhhcCHHHHHHCCCcEEEEecCCCC------cccccCCCceEEEEECCCCCcccHHHHHHHHHH
Confidence 45689999999999999999999999999999999987543 112345799999999999876777789999999
Q ss_pred HHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 103 FIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 103 ~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
||++..+.+++|||||.+|+||||++++||||+
T Consensus 79 ~i~~~~~~~~~VlVHC~aG~~RSg~~v~ayLm~ 111 (177)
T 2oud_A 79 FIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 111 (177)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEEcCCCCCchHHHHHHHHHH
Confidence 999999889999999999999999999999996
No 10
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.9e-29 Score=164.68 Aligned_cols=103 Identities=23% Similarity=0.237 Sum_probs=92.6
Q ss_pred ccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHH
Q psy7473 25 WYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI 104 (136)
Q Consensus 25 ~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i 104 (136)
.+++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+. ....+++|+++|+.|.+.++..+.++++++||
T Consensus 3 ~~~~I~~~lylg~~~~~~~~~~L~~~gi~~Vi~l~~~~~~--------~~~~~~~~~~ipi~D~~~~~l~~~~~~~~~fi 74 (145)
T 2nt2_A 3 SPTQIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREIDN--------FFPGVFEYHNIRVYDEEATDLLAYWNDTYKFI 74 (145)
T ss_dssp CCEEEETTEEEECHHHHTCHHHHHHTTEEEEEECCSSSCC--------SCBTTBEEEECCCCSSTTCCCGGGHHHHHHHH
T ss_pred CccEeeCCEEECChhHhCCHHHHHHCCCCEEEEeCCCCcc--------CCCCCcEEEEEEEeCCCCCcHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999987541 12357999999999987777788999999999
Q ss_pred HHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 105 QRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 105 ~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
++..++|++|||||.+|+||||++++||||+
T Consensus 75 ~~~~~~~~~VlVHC~~G~~RS~~~v~ayLm~ 105 (145)
T 2nt2_A 75 SKAKKHGSKCLVHSKMGVSRSASTVIAYAMK 105 (145)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHcCCeEEEECCCCCchHHHHHHHHHHH
Confidence 9999999999999999999999999999996
No 11
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=99.96 E-value=8.9e-29 Score=162.42 Aligned_cols=107 Identities=26% Similarity=0.397 Sum_probs=93.3
Q ss_pred cccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHH
Q psy7473 26 YDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQ 105 (136)
Q Consensus 26 ~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~ 105 (136)
+++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+ ...++.+...|++|+++|+.|.+..+..+.+.+++++|+
T Consensus 2 ~~~I~~~ly~g~~~~~~d~~~L~~~gi~~Vi~l~~~~~---~~~~~~~~~~~i~~~~ip~~d~~~~~l~~~~~~~~~~i~ 78 (151)
T 2e0t_A 2 ADEVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRW---RGTPEAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIH 78 (151)
T ss_dssp EEEEETTEEEECHHHHTCHHHHHHHTCCEEEETTCCTT---CCSCTTHHHHTCEEEECCCCSSTTSCTHHHHHHHHHHHH
T ss_pred ccEEeCCeEECChhHhCCHHHHHHcCCCEEEEccCCcc---cCCccccCCCCeEEEEEecccCCCccHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999998754 112333446799999999999876667788999999999
Q ss_pred HHHH-cCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 106 RISK-TGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 106 ~~~~-~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+..+ .+++|||||.+|+||||++++||||+
T Consensus 79 ~~~~~~~~~vlVHC~aG~~RSg~~~~ayl~~ 109 (151)
T 2e0t_A 79 RALSQPGGKILVHCAVGVSRSATLVLAYLML 109 (151)
T ss_dssp HHHHSTTCCEEEECSSSSHHHHHHHHHHHHH
T ss_pred HHHhcCCCcEEEECCCCCChHHHHHHHHHHH
Confidence 9987 78999999999999999999999986
No 12
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=99.96 E-value=3.3e-29 Score=172.24 Aligned_cols=113 Identities=23% Similarity=0.260 Sum_probs=95.7
Q ss_pred CCCccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHH
Q psy7473 22 SRRWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGV 101 (136)
Q Consensus 22 ~~~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~ 101 (136)
....+++|.|+||+|+.+.+.+.+.|++.||++|||++.+.+. .......+...+++|+++|+.|.+..+....|.+++
T Consensus 42 ~~~~~~~I~p~LylG~~~~a~d~~~L~~~gIt~Vinl~~~~~~-~~~~~~~~~~~~i~y~~ipi~D~p~~dl~~~f~~~~ 120 (205)
T 2pq5_A 42 TLNHIDEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKFQ-VDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVA 120 (205)
T ss_dssp CEESEEEEETTEEEECHHHHHCHHHHHHHTCCEEEETBCSTTS-CCCHHHHTTTSSCEEEECBCCCCTTSCGGGGHHHHH
T ss_pred ccCCceEEECCEEECChhHhcCHHHHHHcCCeEEEEeCCCccc-CCcchhhhccCCceEEeeecCCCCcchHHHHHHHHH
Confidence 3445899999999999999999999999999999999986431 111123345568999999999987777788899999
Q ss_pred HHHHHHHH-cCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 102 DFIQRISK-TGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 102 ~~i~~~~~-~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+||+++++ ++++|||||.+|+||||++++||||+
T Consensus 121 ~fI~~~l~~~~~~VLVHC~aG~sRS~tvv~aYLm~ 155 (205)
T 2pq5_A 121 RYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMI 155 (205)
T ss_dssp HHHHHHHTSTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEECCCCCcHHHHHHHHHHHH
Confidence 99999886 78999999999999999999999996
No 13
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=99.96 E-value=3.6e-28 Score=161.06 Aligned_cols=104 Identities=21% Similarity=0.359 Sum_probs=93.4
Q ss_pred CCccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHH
Q psy7473 23 RRWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVD 102 (136)
Q Consensus 23 ~~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~ 102 (136)
.+-+++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+. ...+++|+++|+.|...++..+.+.++++
T Consensus 5 ~~~~~~I~~~lylg~~~~~~d~~~L~~~gI~~Vi~l~~~~~~---------~~~~i~~~~ipi~D~~~~~~~~~~~~~~~ 75 (160)
T 1yz4_A 5 GNGMTKVLPGLYLGNFIDAKDLDQLGRNKITHIISIHESPQP---------LLQDITYLRIPVADTPEVPIKKHFKECIN 75 (160)
T ss_dssp CSSSEEEETTEEEECTTGGGCHHHHHHTTCCEEEEECSSCCC---------CCTTCEEEEECCCSCTTSCGGGGHHHHHH
T ss_pred CCCceEEECCEEECChhhhcCHHHHHHCCCeEEEEccCCCCC---------ccCCCeEEEEECCCCCCccHHHHHHHHHH
Confidence 445899999999999999999999999999999999976431 13689999999999886777789999999
Q ss_pred HHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 103 FIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 103 ~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
||++..+.+++|||||.+|+||||++++||||+
T Consensus 76 ~i~~~~~~~~~VlVHC~aG~~RSg~~~~aylm~ 108 (160)
T 1yz4_A 76 FIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMT 108 (160)
T ss_dssp HHHHHHHTTCCEEEEETTSSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCCchHHHHHHHHHHH
Confidence 999999889999999999999999999999985
No 14
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=99.96 E-value=2.6e-28 Score=165.75 Aligned_cols=106 Identities=21% Similarity=0.257 Sum_probs=93.9
Q ss_pred CCCccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHH
Q psy7473 22 SRRWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGV 101 (136)
Q Consensus 22 ~~~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~ 101 (136)
..+.+++|.|+||+|+.+.+.+.+.|++.||++|||++.+.+. . ...|++|+++|+.|....+..+.+++++
T Consensus 16 ~~~~~~~I~~~LylG~~~~a~d~~~L~~~gIt~Vi~l~~~~~~------~--~~~~i~~~~ipi~D~~~~~~~~~~~~~~ 87 (188)
T 2esb_A 16 SVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVN------T--LYEDIQYMQVPVADSPNSRLCDFFDPIA 87 (188)
T ss_dssp --CCCEEEETTEEEECTTGGGCHHHHHHTTCCEEEECCSSCCC------C--CCTTCEEEECCCCSCTTSCGGGGHHHHH
T ss_pred CCCCceEEeCCEEEcCchHhcCHHHHHHCCCcEEEEecCCCCC------c--CCCCCEEEEEeCcCCCCccHHHHHHHHH
Confidence 3455899999999999999999999999999999999987541 1 1358999999999988777888999999
Q ss_pred HHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 102 DFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 102 ~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+||+++.+++++|||||.+|+||||++++||||+
T Consensus 88 ~fI~~~~~~~~~VLVHC~aG~sRS~~vv~ayLm~ 121 (188)
T 2esb_A 88 DHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMK 121 (188)
T ss_dssp HHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCCchHHHHHHHHHHH
Confidence 9999999899999999999999999999999996
No 15
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=99.95 E-value=2.7e-28 Score=162.44 Aligned_cols=104 Identities=24% Similarity=0.377 Sum_probs=92.8
Q ss_pred CccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHH
Q psy7473 24 RWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDF 103 (136)
Q Consensus 24 ~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~ 103 (136)
.-+++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+. ...+++|+++|+.|.+.++..+.+.++++|
T Consensus 5 ~~~~~I~~~lylG~~~~~~d~~~L~~~gI~~Vi~l~~~~~~---------~~~~i~~~~ip~~D~~~~~l~~~~~~~~~f 75 (165)
T 1wrm_A 5 NGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARP---------MLEGVKYLCIPAADSPSQNLTRHFKESIKF 75 (165)
T ss_dssp SSCEEEETTEEEECTTGGGCHHHHHHTTEEEEEECSTTCCC---------CSTTCEEEECCCCSSTTSCCGGGHHHHHHH
T ss_pred CchheEECCEEECChhHhcCHHHHHHCCCcEEEEecCCCCC---------CCCCCeEEEEECCCCCCccHHHHHHHHHHH
Confidence 34789999999999999999999999999999999976531 246899999999998766777889999999
Q ss_pred HHHHHHcCCeEEEEcCCCCChHHHHHHHHhhcC
Q psy7473 104 IQRISKTGGTVYVHCKAGRTRSATLVGCYLMKC 136 (136)
Q Consensus 104 i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~~ 136 (136)
|++..+++++|||||.+|+||||++++||||+.
T Consensus 76 i~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 108 (165)
T 1wrm_A 76 IHECRLRGESCLVHCLAGVSRSVTLVIAYIMTV 108 (165)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred HHHHHHCCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 999988899999999999999999999999963
No 16
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=99.95 E-value=2.5e-28 Score=162.44 Aligned_cols=106 Identities=23% Similarity=0.301 Sum_probs=95.0
Q ss_pred CCCccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHH
Q psy7473 22 SRRWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGV 101 (136)
Q Consensus 22 ~~~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~ 101 (136)
..+.+++|.|+||+|+.+.+.+.+.|++.||++|||++.+.+. ....|++|+++|+.|.+.++..+.+.+++
T Consensus 8 ~~~~~~~I~~~l~lg~~~~~~d~~~L~~~gI~~Vi~l~~~~~~--------~~~~~~~~~~ip~~D~~~~~~~~~~~~~~ 79 (164)
T 2hcm_A 8 APPPFARVAPALFIGNARAAGATELLVRAGITLCVNVSRQQPG--------PRAPGVAELRVPVFDDPAEDLLTHLEPTC 79 (164)
T ss_dssp SCCSEEEEETTEEEEEGGGGGCHHHHHHTTEEEEEECSSSCCC--------CCCTTCEEEECCCCSCTTSCCHHHHHHHH
T ss_pred CCCCCeEEeCCEEECChhhhcCHHHHHHCCCeEEEEcCCCCCC--------CCCCCCEEEEEeCcCCCCchHHHHHHHHH
Confidence 4456899999999999999999999999999999999987642 12468999999999987677788999999
Q ss_pred HHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 102 DFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 102 ~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+||++..+.+++|||||.+|+||||++++||||+
T Consensus 80 ~~i~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~ 113 (164)
T 2hcm_A 80 AAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMR 113 (164)
T ss_dssp HHHHHHHHTTCEEEEEESSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCCchHHHHHHHHHHH
Confidence 9999999889999999999999999999999996
No 17
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=99.95 E-value=2.5e-28 Score=168.35 Aligned_cols=105 Identities=21% Similarity=0.288 Sum_probs=94.5
Q ss_pred CCccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHH
Q psy7473 23 RRWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVD 102 (136)
Q Consensus 23 ~~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~ 102 (136)
.+.+++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+. . ...+++|+++|+.|...++..++++++++
T Consensus 3 ~~~p~eI~p~LylG~~~~a~d~~~L~~~GIt~VInl~~e~~~-------~-~~~gi~y~~ipi~D~~~~~l~~~~~~~~~ 74 (211)
T 2g6z_A 3 HMGPVEILPFLYLGSAYHASKCEFLANLHITALLNVSRRTSE-------A-CMTHLHYKWIPVEDSHTADISSHFQEAID 74 (211)
T ss_dssp SCCCEEEETTEEEEEHHHHTCHHHHHHHTCCEEEECSSCCCC-------T-TCTTSEEEECCCCSSTTSCCGGGHHHHHH
T ss_pred CCCCeEEECCEEEcCCccccCHHHHHHCCCCEEEEcCCCCcc-------c-cccCCEEEEeeCCCCCCCCHHHHHHHHHH
Confidence 456899999999999999999999999999999999987531 1 23689999999999887777789999999
Q ss_pred HHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 103 FIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 103 ~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
||++..+++++|||||.+|+|||+++++||||+
T Consensus 75 fI~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~ 107 (211)
T 2g6z_A 75 FIDCVREKGGKVLVHSEAGISRSPTICMAYLMK 107 (211)
T ss_dssp HHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEECCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999996
No 18
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=99.95 E-value=3.7e-28 Score=168.55 Aligned_cols=110 Identities=20% Similarity=0.267 Sum_probs=94.4
Q ss_pred ccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHH
Q psy7473 25 WYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI 104 (136)
Q Consensus 25 ~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i 104 (136)
.+++|.|+||+|+.+.+.+...|+++||++|||++.+... ....+..+...+++|+++|+.|.+..+..+.|.++++||
T Consensus 53 ~~~~I~p~LylG~~~~a~d~~~L~~~gIt~VInl~~~~~~-~~~~~~~~~~~~i~y~~ipi~D~~~~~l~~~~~~~~~fI 131 (219)
T 2y96_A 53 HVNEVWPKLYIGDEATALDRYRLQKAGFTHVLNAAHGRWN-VDTGPDYYRDMDIQYHGVEADDLPTFDLSVFFYPAAAFI 131 (219)
T ss_dssp SEEEEETTEEEECHHHHHCHHHHHHTTCCEEEETTBSTTS-BCCHHHHTTTSCCEEEECCCCSSTTSCGGGGHHHHHHHH
T ss_pred CceEEECCEEECChhHhCCHHHHHHCCCeEEEECCCCccc-cccchhhhcccCcEEEEEECCCCCchhHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999976421 111123345679999999999987677778999999999
Q ss_pred HHHH-HcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 105 QRIS-KTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 105 ~~~~-~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
++++ +.+++|||||.+|+||||++++||||+
T Consensus 132 ~~~l~~~~~~VLVHC~aG~sRS~tvv~aYLm~ 163 (219)
T 2y96_A 132 DRALSDDHSKILVHCVMGRSRSATLVLAYLMI 163 (219)
T ss_dssp HHHHTSTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHccCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 9998 678999999999999999999999996
No 19
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=162.98 Aligned_cols=106 Identities=25% Similarity=0.316 Sum_probs=93.9
Q ss_pred CCCccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHH
Q psy7473 22 SRRWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGV 101 (136)
Q Consensus 22 ~~~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~ 101 (136)
..+.+++|.|+||+|+.+.+.+.+.|+++||++|||++.+.+. . ...|++|+++|+.|...++..+.+.+++
T Consensus 22 ~~~~~~~I~~~LylG~~~~a~d~~~L~~~gI~~Vi~l~~~~~~------~--~~~gi~y~~ipi~D~~~~~l~~~~~~~~ 93 (190)
T 2wgp_A 22 DIGGIAQITSSLFLGRGSVASNRHLLQARGITCIVNATIEIPN------F--NWPQFEYVKVPLADMPHAPIGLYFDTVA 93 (190)
T ss_dssp -CTTEEEEETTEEEECHHHHTCHHHHHHTTCCEEEECCSSSCC------C--CCTTSEEEECCCCSSTTSCGGGGHHHHH
T ss_pred CCCCceEEeCcEEEcChhhhcCHHHHHHCCCcEEEEecCCCCC------C--CCCCCEEEEEEcccCCCCCHHHHHHHHH
Confidence 4456999999999999999999999999999999999987541 1 1358999999999987677778899999
Q ss_pred HHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 102 DFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 102 ~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+||++..+++++|||||.+|+||||++++||||+
T Consensus 94 ~fi~~~~~~~~~VlVHC~aG~~RSgtvv~ayLm~ 127 (190)
T 2wgp_A 94 DKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMK 127 (190)
T ss_dssp HHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 9999999889999999999999999999999996
No 20
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=99.94 E-value=6.9e-27 Score=152.94 Aligned_cols=104 Identities=27% Similarity=0.409 Sum_probs=92.3
Q ss_pred ccccccCc-EEEeCCC-CcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHH
Q psy7473 25 WYDRIDEN-IILGALP-FKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVD 102 (136)
Q Consensus 25 ~~~~i~~~-l~~g~~~-~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~ 102 (136)
-+++|.|+ +|.|+.| .+.+.+.|++.||++|||++.+.+. ......|++|+++|+.|.. .+..+.+.++++
T Consensus 7 ~~~~i~~~~l~~~~~p~~~~~~~~L~~~gi~~Vi~l~~~~~~------~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~ 79 (150)
T 4erc_A 7 NFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPP------HSDSCPGLTLHRLRIPDFC-PPAPDQIDRFVQ 79 (150)
T ss_dssp TCEEEETTTEEEESCCCSHHHHHHHHHTTEEEEEECSSSCCT------TGGGCTTSEEEECCCCTTS-CCCHHHHHHHHH
T ss_pred CCEEeccCceeeecCCCCHHHHHHHHHCCCCEEEEcCCCCCC------cccccCCceEEEEecCCCC-CCCHHHHHHHHH
Confidence 47889999 9999999 7788899999999999999998762 1223468999999999986 677889999999
Q ss_pred HHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 103 FIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 103 ~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+|++..+++++|+|||.+|+||||+++++|||+
T Consensus 80 ~i~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~ 112 (150)
T 4erc_A 80 IVDEANARGEAVGVHCALGFGRTGTMLACYLVK 112 (150)
T ss_dssp HHHHHHHTTCEEEEECSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 999999889999999999999999999999986
No 21
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=99.93 E-value=8.1e-26 Score=147.81 Aligned_cols=104 Identities=27% Similarity=0.425 Sum_probs=89.7
Q ss_pred ccccccCc-EEEeCCC-CcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHH
Q psy7473 25 WYDRIDEN-IILGALP-FKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVD 102 (136)
Q Consensus 25 ~~~~i~~~-l~~g~~~-~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~ 102 (136)
.+++|.|+ +|+|+.| .+.+.+.|+++||++|||++.+.+. .... ..++.|+++|+.|.. .+..+.+.++++
T Consensus 8 ~~~~I~~~~l~~~~~p~~~~~~~~l~~~gi~~Vv~l~~~~e~----~~~~--~~~~~~~~~~~~d~~-~p~~~~~~~~~~ 80 (151)
T 2img_A 8 NFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPP----HSDS--CPGLTLHRLRIPDFC-PPAPDQIDRFVQ 80 (151)
T ss_dssp TCEEEETTTEEEESCCCSHHHHHHHHHTTEEEEEECSSSCCT----TGGG--CTTSEEEECCCCTTC-CCCHHHHHHHHH
T ss_pred CcEEeecCceeeeCCCCcHHHHHHHHHCCCCEEEECCCCCCC----CHHH--HhhCCeEEEeCCCCC-CCCHHHHHHHHH
Confidence 47889999 9999999 7888899999999999999988552 0112 235679999999987 556788999999
Q ss_pred HHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 103 FIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 103 ~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+|++..+++++|+|||.+|+||||+++++|||+
T Consensus 81 ~i~~~~~~~~~vlVHC~aG~~Rsg~~~~~~l~~ 113 (151)
T 2img_A 81 IVDEANARGEAVGVHCALGFGRTGTMLACYLVK 113 (151)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcEEEECCCCCChHHHHHHHHHHH
Confidence 999998889999999999999999999999985
No 22
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=99.93 E-value=2.7e-26 Score=154.22 Aligned_cols=102 Identities=21% Similarity=0.274 Sum_probs=89.7
Q ss_pred CCccccccCcEEEeCCCCcccHHHHHhcCC--CEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHH
Q psy7473 23 RRWYDRIDENIILGALPFKRLTNKLLEENV--KGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERG 100 (136)
Q Consensus 23 ~~~~~~i~~~l~~g~~~~~~~~~~l~~~gi--~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~ 100 (136)
...+++|.|+||+|+.+.+.+. ++.|| ++|||++.+.+. ....+++|+++|+.|.+.++..+.++++
T Consensus 29 ~~~~~~I~~~lylg~~~~a~~~---~~~gI~~~~Ii~l~~~~~~--------~~~~~~~~~~~p~~d~~~~~l~~~~~~~ 97 (176)
T 3cm3_A 29 PTIMTRVTNNVYLGNYKNAMDA---PSSEVKFKYVLNLTMDKYT--------LPNSNINIIHIPLVDDTTTDISKYFDDV 97 (176)
T ss_dssp CCSCEECSSSEEEECHHHHHTG---GGSSSCCSEEEECSSSCCC--------CTTSCCEEEECCCCCSSSCCCGGGHHHH
T ss_pred CCCceEEeCCEEEcCHHHhhCH---HHcCCCCCEEEEecCCCCC--------cCCCCCEEEEEECCCCCcccHHHHHHHH
Confidence 3459999999999999887765 77999 999999987541 1246899999999998877777889999
Q ss_pred HHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 101 VDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 101 ~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
++||+++.+.+++|||||.+|+||||++++||||+
T Consensus 98 ~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~aylm~ 132 (176)
T 3cm3_A 98 TAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMS 132 (176)
T ss_dssp HHHHHHHHHHTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEECCcCCCHHHHHHHHHHHH
Confidence 99999999889999999999999999999999996
No 23
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.93 E-value=2.1e-26 Score=165.87 Aligned_cols=112 Identities=23% Similarity=0.349 Sum_probs=91.9
Q ss_pred ccccccCcEEEeCCC-CcccHHHHHhcCCCEEEEcccCccc-ccccC----hhhhhhc-CCeEEEeeCCCCCCCchHHHH
Q psy7473 25 WYDRIDENIILGALP-FKRLTNKLLEENVKGVVSMNEDYEL-YFANG----REEWNKV-GVEFLQLSTRDIFDTPDQDKL 97 (136)
Q Consensus 25 ~~~~i~~~l~~g~~~-~~~~~~~l~~~gi~~Vi~l~~~~~~-~~~~~----~~~~~~~-~i~~~~~p~~D~~~~~~~~~~ 97 (136)
-+++|.|+||+|+.+ .+.+.+.|++.||++|||++.+.+. .+... .+.++.. +++|+++|+.|...++..+.+
T Consensus 12 n~s~I~p~LylGs~~~~~~d~~~L~~~GIt~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~~~~~l~~~~ 91 (294)
T 3nme_A 12 NYNFIRPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRL 91 (294)
T ss_dssp CEEEEETTEEEECCCCSTHHHHHHHHTTEEEEEECCCHHHHHHTTCCHHHHHHHHHTCTTCEEEECCCCTTCHHHHHHHH
T ss_pred CceEEeCCEEEEcCCCCHHHHHHHHHCCCCEEEECCCCcchhhccCChhhhhhhhhhcCCcEEEEEeCCCCCCCCHHHHH
Confidence 389999999999987 5677889999999999999987653 11001 1222333 799999999998855666889
Q ss_pred HHHHHHHHHHH-HcCCeEEEEcCCCCChHHHHHHHHhhcC
Q psy7473 98 ERGVDFIQRIS-KTGGTVYVHCKAGRTRSATLVGCYLMKC 136 (136)
Q Consensus 98 ~~~~~~i~~~~-~~~~~VlVHC~~G~~RS~~v~~ayLm~~ 136 (136)
.+++++|++++ +.|++|||||.+|+|||+++++||||++
T Consensus 92 ~~~~~~I~~~l~~~g~~VLVHC~aG~sRS~tvv~ayLm~~ 131 (294)
T 3nme_A 92 PAVVGTLYKAVKRNGGVTYVHSTAGMGRAPAVALTYMFWV 131 (294)
T ss_dssp HHHHHHHHHHHHHHCSEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCCCchhHHHHHHHHHHH
Confidence 99999999987 5688999999999999999999999974
No 24
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=99.93 E-value=1.2e-25 Score=151.87 Aligned_cols=95 Identities=23% Similarity=0.271 Sum_probs=78.3
Q ss_pred cccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHH
Q psy7473 28 RIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRI 107 (136)
Q Consensus 28 ~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~ 107 (136)
.|.|+||+|+.+.+.+. .||++|||++.+.+.. .. ...+++|+++|+.| ..+..++|.++++||+++
T Consensus 47 ii~~~LylG~~~~a~d~-----~gIt~Vlnv~~e~~~~----~~--~~~~i~y~~ip~~d--~~~i~~~~~~~~~fI~~~ 113 (182)
T 2j16_A 47 VLPEKIYLYSEPTVKEL-----LPFDVVINVAEEANDL----RM--QVPAVEYHHYRWEH--DSQIALDLPSLTSIIHAA 113 (182)
T ss_dssp EETTTEEEEESCCTTTT-----TTCSEEEECCSCC--------------CCEEEECCCSS--GGGGGGGHHHHHHHHHHH
T ss_pred EECCcEEEeCHHHHHHH-----hCCCEEEEecCCCCCc----hh--ccCCceEEEEecCC--CchHHHHHHHHHHHHHHH
Confidence 44589999999987652 7999999999875420 11 12489999999987 367888999999999999
Q ss_pred HHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 108 SKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 108 ~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
.++|++|||||.+|+|||+++++||||+
T Consensus 114 ~~~g~~VLVHC~~G~sRS~tvv~ayLm~ 141 (182)
T 2j16_A 114 TTKREKILIHAQCGLSRSATLIIAYIMK 141 (182)
T ss_dssp HHTTCCEEEEESSCCSHHHHHHHHHHHH
T ss_pred HhcCCeEEEECCCCCChHHHHHHHHHHH
Confidence 9999999999999999999999999996
No 25
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=99.92 E-value=3.4e-26 Score=156.14 Aligned_cols=103 Identities=22% Similarity=0.315 Sum_probs=90.3
Q ss_pred CCCccccccCcEEEeCCCCcccHHHHHhcCC--CEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHH
Q psy7473 22 SRRWYDRIDENIILGALPFKRLTNKLLEENV--KGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLER 99 (136)
Q Consensus 22 ~~~~~~~i~~~l~~g~~~~~~~~~~l~~~gi--~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~ 99 (136)
...++++|.|+||+|+.+.+.+. ++.|| ++|||++.+.+. ....+++|+++|+.|.+.++..+.+.+
T Consensus 45 ~~~~~~~I~~~Lylg~~~~~~~~---~~~gI~~~~Vi~l~~~~~~--------~~~~~~~~~~~p~~d~~~~~l~~~~~~ 113 (195)
T 2q05_A 45 SPTIMTRVTNNVYLGNYKNAMDA---PSSEVKFKYVLNLTMDKYT--------LPNSNINIIHIPLVDDTTTDISKYFDD 113 (195)
T ss_dssp BCCSCEECSSSEEEECHHHHHHS---TTSSSCCSEEEECSSSCCC--------CTTCCCEEEECCCCCSSSCCCGGGHHH
T ss_pred CCCCCeEEeCCEEECchhhhhCH---HhCCCCCCEEEEECCCCCC--------cccCCcEEEEEEcCCCCcccHHHHHHH
Confidence 44579999999999999887655 77999 999999987541 235789999999999876777888999
Q ss_pred HHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 100 GVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 100 ~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
++++|++..+.+++|||||.+|+||||+++++|||+
T Consensus 114 ~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~~yL~~ 149 (195)
T 2q05_A 114 VTAFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMS 149 (195)
T ss_dssp HHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEcCCCCChHHHHHHHHHHH
Confidence 999999999889999999999999999999999986
No 26
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=99.92 E-value=6.8e-25 Score=143.82 Aligned_cols=106 Identities=16% Similarity=0.308 Sum_probs=84.0
Q ss_pred cccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCC---CchHHHHHHHHH
Q psy7473 26 YDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFD---TPDQDKLERGVD 102 (136)
Q Consensus 26 ~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~---~~~~~~~~~~~~ 102 (136)
+++|.++||+|+.+.+.+.+.|+++||++|||++.+.+. ....+.....|++|+++|+.|... ....+.+.++++
T Consensus 8 ~~~v~~~l~~s~~~~~~d~~~L~~~gi~~Vi~l~~~~e~--~~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~~~~~ 85 (151)
T 1xri_A 8 FSMVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYP--ESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALK 85 (151)
T ss_dssp CEEEETTEEEESCCCHHHHHHHHHHTCSEEEECCSSCCC--HHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHHH
T ss_pred cCeeCCCeEECCCcCccCHHHHHHCCCCEEEECCCCCcC--hhHHHHHHhcCCeEEecccccccCccccCCHHHHHHHHH
Confidence 678999999999999999999999999999999987663 111223445799999999998641 223456777777
Q ss_pred HHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 103 FIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 103 ~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+|.+ +.+++|||||.+|+||||+++++||+.
T Consensus 86 ~i~~--~~~~~vlvHC~aG~~RTg~~~a~~l~~ 116 (151)
T 1xri_A 86 VLLD--EKNHPVLIHCKRGKHRTGCLVGCLRKL 116 (151)
T ss_dssp HHHC--GGGCSEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHc--CCCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 7642 357899999999999999999888763
No 27
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=99.91 E-value=2.1e-24 Score=142.62 Aligned_cols=106 Identities=22% Similarity=0.287 Sum_probs=86.8
Q ss_pred cccccCc-EEEeCCCC-cccHHHHHhcCCCEEEEcccCccc-ccc----cChhhhhhcCCeEEEeeCCCCCCCchHHHHH
Q psy7473 26 YDRIDEN-IILGALPF-KRLTNKLLEENVKGVVSMNEDYEL-YFA----NGREEWNKVGVEFLQLSTRDIFDTPDQDKLE 98 (136)
Q Consensus 26 ~~~i~~~-l~~g~~~~-~~~~~~l~~~gi~~Vi~l~~~~~~-~~~----~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~ 98 (136)
|++|.|+ ||+|+.+. +.+.+.|+++||++|||++.+.|. ..+ ...+.+...|++|+++|+.|.. .+..+.+.
T Consensus 1 ~~~I~~~~l~~~~~~~~~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~p~~d~~-~p~~~~~~ 79 (161)
T 2i6j_A 1 MYWVRRKTIGGSGLPYTENEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDGG-VPSDSQFL 79 (161)
T ss_dssp CEEEETTTEEEECCCSSHHHHHHHHHHTCCEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCCTTC-CCCHHHHH
T ss_pred CCcccccceeecCCCCCHHHHHHHHHCCCCEEEEcCchhhhhhhccchhhHHHHHHHcCceEEEecCCCCC-CCChHHHH
Confidence 5789999 99999998 467889999999999999987553 100 1112256689999999999887 56677899
Q ss_pred HHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 99 RGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 99 ~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+++++|++..+.+ +|||.+|+||||+++++|||.
T Consensus 80 ~~~~~i~~~~~~~---lVHC~aG~~Rtg~~~~~~l~~ 113 (161)
T 2i6j_A 80 TIMKWLLSEKEGN---LVHCVGGIGRTGTILASYLIL 113 (161)
T ss_dssp HHHHHHHHCCTTE---EEECSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC---EEECCCCCCHHHHHHHHHHHH
Confidence 9999998876653 999999999999999999985
No 28
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=99.89 E-value=5.2e-23 Score=141.88 Aligned_cols=110 Identities=19% Similarity=0.179 Sum_probs=88.7
Q ss_pred ccccccCc-------EEEeCCCC----------cccHHHHHhcCCCEEEEcccCccc-c--cccChhhhhhcCCeEEEee
Q psy7473 25 WYDRIDEN-------IILGALPF----------KRLTNKLLEENVKGVVSMNEDYEL-Y--FANGREEWNKVGVEFLQLS 84 (136)
Q Consensus 25 ~~~~i~~~-------l~~g~~~~----------~~~~~~l~~~gi~~Vi~l~~~~~~-~--~~~~~~~~~~~~i~~~~~p 84 (136)
++++|.++ |.++..|. +.+.+.|+++||++||||+.+.|. . .+...+.+...|++|+++|
T Consensus 28 ~~~~v~~~~~~~~g~l~~~~~Pg~~~~~~~~~~~~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~p 107 (212)
T 1fpz_A 28 HISWLSLSRVNCSQFLGLCALPGCKFKDVRRNVQKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHP 107 (212)
T ss_dssp CCEEEECGGGTCCCEEEEESCTTCEETTEECCHHHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECC
T ss_pred ceEEeccCCcCCCCeEEEecCCCCCCccchhhHHHHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEec
Confidence 46677654 56677774 456778999999999999987653 1 1222444567899999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 85 TRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 85 ~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+.|.. .+..+.+.+++++|++..+.+++|+|||.+|+||||+++++|||+
T Consensus 108 i~d~~-~p~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~gRTg~~~a~~L~~ 157 (212)
T 1fpz_A 108 IADGG-TPDIASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLY 157 (212)
T ss_dssp CCTTC-CCCHHHHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCCC-CCCHHHHHHHHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 99987 556688999999999988889999999999999999999999986
No 29
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=99.87 E-value=6.3e-22 Score=131.21 Aligned_cols=97 Identities=19% Similarity=0.221 Sum_probs=78.4
Q ss_pred EEEeCCCCcc----cHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHH
Q psy7473 33 IILGALPFKR----LTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRIS 108 (136)
Q Consensus 33 l~~g~~~~~~----~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~ 108 (136)
......|... +.+.|.++||++||+|+.+.. ..+.....+++|+++|+.|.. .+..+.+.++++++++..
T Consensus 25 ~i~tq~P~~~t~~~~~~~l~~~gi~~Iv~l~~~~~-----~~~~~~~~~i~~~~~p~~d~~-~p~~~~~~~~~~~i~~~~ 98 (167)
T 3s4o_A 25 FLILDAPSPSNLPTYIKELQHRGVRHLVRVCGPTY-----DATLVKSRGIDVHSWPFDDGA-PPTRAVLDSWLKLLDTEL 98 (167)
T ss_dssp EEEECCCCGGGHHHHHHHHHTTTEEEEEECSCCCS-----CTHHHHTTTCEEEECCCCTTC-CCCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCchhhHHHHHHHHHHCCCCEEEECCCCCC-----CHHHHHHCCCeEEEeccCCCC-CCCHHHHHHHHHHHHHHH
Confidence 3444445443 345688899999999998743 245566789999999999987 666778888888888877
Q ss_pred Hc--------CCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 109 KT--------GGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 109 ~~--------~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+. +++|||||.+|+||||+++++|||.
T Consensus 99 ~~~~~~~~~~~~~vlVHC~aG~~RTg~~~a~~L~~ 133 (167)
T 3s4o_A 99 ARQQEDPSVPPPTIGVHCVAGLGRAPILVALALVE 133 (167)
T ss_dssp HHHHHCTTCCCCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHhhccccCCCcEEEECCCCCCHHHHHHHHHHHH
Confidence 54 8999999999999999999999996
No 30
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=99.85 E-value=3.3e-21 Score=128.47 Aligned_cols=90 Identities=16% Similarity=0.345 Sum_probs=70.7
Q ss_pred ccHHHHH--hcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHH--cCCeEEEE
Q psy7473 42 RLTNKLL--EENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISK--TGGTVYVH 117 (136)
Q Consensus 42 ~~~~~l~--~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~--~~~~VlVH 117 (136)
.+.+.+. +.||++||||+.+.+ ....+.+...|++|+++|+.|.. .|..+.+.++++.+++..+ .+++|+||
T Consensus 44 ~~~~~ll~~~~gi~~Vi~l~~~~~---~~~~~~~~~~gi~~~~~~~~d~~-~p~~~~~~~~~~~~~~~~~~~~~~~vlVH 119 (169)
T 1yn9_A 44 WTAEQIVKQNPSIGAIIDLTNTSK---YYDGVHFLRAGLLYKKIQVPGQT-LPPESIVQEFIDTVKEFTEKCPGMLVGVH 119 (169)
T ss_dssp CCHHHHHHHCTTEEEEEECCSCSC---SCCTHHHHHTTCEEEECCCCSSS-CCCHHHHHHHHHHHHHHHHHSTTSEEEEE
T ss_pred CCHHHHHhhCCCcCEEEEcCCCCC---CCCHHHHHhcCCEEEEEeCCCCC-CCCHHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 3444444 599999999987643 12345566789999999999987 5666777777777766554 67899999
Q ss_pred cCCCCChHHHHHHHHhhc
Q psy7473 118 CKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 118 C~~G~~RS~~v~~ayLm~ 135 (136)
|.+|+||||+++++|||+
T Consensus 120 C~aG~~RTg~~va~~L~~ 137 (169)
T 1yn9_A 120 CTHGINRTGYMVCRYLMH 137 (169)
T ss_dssp CSSSSHHHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHH
Confidence 999999999999999996
No 31
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=99.85 E-value=3.2e-21 Score=130.80 Aligned_cols=99 Identities=20% Similarity=0.291 Sum_probs=81.3
Q ss_pred CcEEEeCCCCc----ccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHH
Q psy7473 31 ENIILGALPFK----RLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQR 106 (136)
Q Consensus 31 ~~l~~g~~~~~----~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~ 106 (136)
..+.+...|.. .+.+.|+++||++|||++.+.+ ..+.+...+++|+++|+.|.. ++..+.+.+++++|++
T Consensus 37 ~r~I~tq~P~~~t~~~~~~~L~~~gi~~Iv~l~~~~~-----~~~~~~~~~i~~~~~pi~d~~-~~~~~~~~~~~~~i~~ 110 (189)
T 3rz2_A 37 MRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATY-----DTTLVEKEGIHVLDWPFDDGA-PPSNQIVDDWLSLVKI 110 (189)
T ss_dssp EEEEEECCCCTTTHHHHHHHHHTTTEEEEEECSCCCS-----CCHHHHHSSCEEEECCCCSSS-CCCSHHHHHHHHHHHH
T ss_pred CeEEEeCCCCcccHHHHHHHHHHcCCcEEEEeCCCcC-----CHHHHHHcCcEEEEecCCCCC-CCCHHHHHHHHHHHHH
Confidence 34555656555 3456788899999999998754 245566789999999998876 7888899999999988
Q ss_pred HH--HcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 107 IS--KTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 107 ~~--~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
.. .++++|+|||.+|+||||+++++|||+
T Consensus 111 ~~~~~~~~~VlVHC~aG~gRSg~~va~~L~~ 141 (189)
T 3rz2_A 111 KFREEPGCCIAVHCVAGLGRAPVLVALALIE 141 (189)
T ss_dssp HHHHSTTCEEEEECSSSSTTHHHHHHHHHHT
T ss_pred HHHhCCCCcEEEECCCCCCHHHHHHHHHHHH
Confidence 74 577899999999999999999999985
No 32
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=99.84 E-value=2.3e-20 Score=122.70 Aligned_cols=98 Identities=20% Similarity=0.283 Sum_probs=78.2
Q ss_pred cEEEeCCCCccc----HHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHH
Q psy7473 32 NIILGALPFKRL----TNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRI 107 (136)
Q Consensus 32 ~l~~g~~~~~~~----~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~ 107 (136)
.++.++.|.... .+.+.+.||++||++++..+ ........+++|+++|+.|.. ++..+.+.+++++|++.
T Consensus 17 ~~i~s~~p~~~t~~df~~~l~~~gi~~Iv~l~~~~~-----~~~~~~~~~~~~~~~p~~d~~-~~~~~~~~~~~~~i~~~ 90 (159)
T 1rxd_A 17 RFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATY-----DTTLVEKEGIHVLDWPFDDGA-PPSNQIVDDWLSLVKIK 90 (159)
T ss_dssp EEEECCCCCGGGHHHHHHHHHHTTEEEEEECSCCCS-----CCHHHHHTTCEEEECCC--CC-CCCHHHHHHHHHHHHHH
T ss_pred eEEEeCCCccccHHHHHHHHHHcCCCEEEEcCCCcc-----CHHHHHHcCCEEEeCCCcCCC-CCCHHHHHHHHHHHHHH
Confidence 467777776653 45588899999999998754 234455679999999988875 77788899999999887
Q ss_pred HH--cCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 108 SK--TGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 108 ~~--~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
.+ .+++|+|||.+|+||||+++++|||.
T Consensus 91 ~~~~~~~~vlVHC~aG~~Rtg~~~a~~l~~ 120 (159)
T 1rxd_A 91 FREEPGCCIAVHCVAGLGRAPVLVALALIE 120 (159)
T ss_dssp HHHSTTCEEEEECSSSSTTHHHHHHHHHHH
T ss_pred HHhCCCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 64 46899999999999999999999985
No 33
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=99.84 E-value=6.1e-21 Score=140.08 Aligned_cols=101 Identities=24% Similarity=0.421 Sum_probs=78.5
Q ss_pred cccccCcEEEeC-CCC--------------cccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCC
Q psy7473 26 YDRIDENIILGA-LPF--------------KRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFD 90 (136)
Q Consensus 26 ~~~i~~~l~~g~-~~~--------------~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~ 90 (136)
+++|.|++++|+ .|. +.+.+.|+++||++|||++++.. ..+.+...|++|+++|+.|..
T Consensus 178 ~~~I~p~~~i~~~~P~~~~~~~~~~~~~~~~~~~~~L~~~GI~~VInL~~~~y-----~~~~~~~~gi~~~~ipi~D~~- 251 (348)
T 1ohe_A 178 LNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFKNHNVTTIIRLNKRMY-----DAKRFTDAGFDHHDLFFADGS- 251 (348)
T ss_dssp EEEEETTTEEEECCCCSSCBCSTTCCBCCTHHHHHHHHHTTEEEEEECSCCSS-----CTHHHHTTTCEEEECCCCTTC-
T ss_pred CCEEeCCeEEEECCCccccccccccccCCHHHHHHHHHHcCCCEEEECCCCcC-----ChhhhhcCCcEEEEecCCCCC-
Confidence 578999877774 342 23456788999999999996632 245566789999999999976
Q ss_pred CchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 91 TPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 91 ~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
.|..+.+. +||+...+.+++|+|||.+|+||||++++||||+
T Consensus 252 ~P~~~~~~---~fi~~~~~~~~~VLVHC~aG~gRTGtvvaayLm~ 293 (348)
T 1ohe_A 252 TPTDAIVK---EFLDICENAEGAIAVHSKAGLGRTGTLIACYIMK 293 (348)
T ss_dssp CCCHHHHH---HHHHHHHSCSSEEEEECSSSSHHHHHHHHHHHHH
T ss_pred CCCHHHHH---HHHHHHHhCCCcEEEECCCCCChHHHHHHHHHHH
Confidence 55554444 5666666778999999999999999999999996
No 34
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=99.84 E-value=1.1e-20 Score=124.62 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=81.5
Q ss_pred ccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCcccc-ccc---ChhhhhhcCCe-EEEeeCCCCCCCchHHHHHH
Q psy7473 25 WYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYELY-FAN---GREEWNKVGVE-FLQLSTRDIFDTPDQDKLER 99 (136)
Q Consensus 25 ~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~-~~~---~~~~~~~~~i~-~~~~p~~D~~~~~~~~~~~~ 99 (136)
-+.+|+|++|+|+.+.+.+...|++.||++|||++++.|.. .+. ..+..+..|++ |+++|+.+. .+..+.+.+
T Consensus 16 n~~~v~~~l~rs~~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~--~~~~~~~~~ 93 (156)
T 2f46_A 16 AILKLDEHLYISPQLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR--DIQKHDVET 93 (156)
T ss_dssp CCEEEETTEEEESCCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT--TCCHHHHHH
T ss_pred CceeccCCEEEcCCCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC--CCCHHHHHH
Confidence 37899999999999999999999999999999999776531 111 11234567999 999999885 344555665
Q ss_pred HHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 100 GVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 100 ~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+.+.++ +.+++|||||.+|+ ||++++++|++.
T Consensus 94 ~~~~l~---~~~~pVlvHC~sG~-Rs~~l~al~l~~ 125 (156)
T 2f46_A 94 FRQLIG---QAEYPVLAYCRTGT-RCSLLWGFRRAA 125 (156)
T ss_dssp HHHHHH---TSCSSEEEECSSSH-HHHHHHHHHHHH
T ss_pred HHHHHH---hCCCCEEEECCCCC-CHHHHHHHHHHH
Confidence 555553 34789999999999 999999998864
No 35
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=99.82 E-value=2.5e-20 Score=130.73 Aligned_cols=86 Identities=19% Similarity=0.365 Sum_probs=69.4
Q ss_pred HHhc--CCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHc--CCeEEEEcCCCC
Q psy7473 47 LLEE--NVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKT--GGTVYVHCKAGR 122 (136)
Q Consensus 47 l~~~--gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~--~~~VlVHC~~G~ 122 (136)
+++. ||++||||+.+.+ ....+.+...|++|+++|+.|...+|..+.+.++++++++.+++ +++|+|||.+|+
T Consensus 76 l~~~~~~i~~VInL~~e~~---~y~~~~~~~~gi~y~~~p~~D~~~~P~~~~l~~~~~~i~~~~~~~~~~~VlVHC~aG~ 152 (241)
T 2c46_A 76 LKSLKVKMGLLVDLTNTSR---FYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERNPPELIGVHCTHGF 152 (241)
T ss_dssp HHHHTCEEEEEEECSSCSC---SSCTHHHHTTTCEEEECCCCCTTCCCCHHHHHHHHHHHTTC-----CEEEEEECSSSS
T ss_pred HHHhCCCcceeeeccCCCC---CCCHHHHHHCCCEEEEEecCCCCCCCChHHHHHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 4444 9999999998743 12355667789999999999864478888889999988876643 589999999999
Q ss_pred ChHHHHHHHHhhc
Q psy7473 123 TRSATLVGCYLMK 135 (136)
Q Consensus 123 ~RS~~v~~ayLm~ 135 (136)
||||++++||||+
T Consensus 153 gRTGt~ia~yLm~ 165 (241)
T 2c46_A 153 NRTGFLICAFLVE 165 (241)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999999997
No 36
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=99.71 E-value=1.3e-18 Score=126.80 Aligned_cols=101 Identities=18% Similarity=0.279 Sum_probs=75.1
Q ss_pred cccccCcEEEeCCCCcccHHHHHhc--------------CCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCC
Q psy7473 26 YDRIDENIILGALPFKRLTNKLLEE--------------NVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDT 91 (136)
Q Consensus 26 ~~~i~~~l~~g~~~~~~~~~~l~~~--------------gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~ 91 (136)
+++|+|+|++++.|.. +.+.+.+. +...|+|++.+... .. ...+.+++++|+.|.. .
T Consensus 19 l~~It~~li~~~~P~~-~~e~l~r~~i~~Vv~~l~~~~~~~~~v~nl~~e~~y----~~---~~~~~~~~~~~~~D~~-~ 89 (324)
T 1d5r_A 19 LTYIYPNIIAMGFPAE-RLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAERHY----DT---AKFNCRVAQYPFEDHN-P 89 (324)
T ss_dssp EEEEETTEEEECCCBS-SCCTTCCCBHHHHHHHHHHHSSSCEEEEEEESSCCC----CT---TSCSSCEEEEEECTTS-C
T ss_pred eEEEcCcEEEEeCCCC-cchhhhccCHHHHHHHHHhcCCCcEEEEEcCCCCCC----Ch---HHhCCeEEEEeecCCC-C
Confidence 8999999999999964 33333333 44456666543210 11 2234679999999987 5
Q ss_pred chHHHHHHHHHHHHHHHH--cCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 92 PDQDKLERGVDFIQRISK--TGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 92 ~~~~~~~~~~~~i~~~~~--~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
|..+.+.++++.+++.++ ++++|+|||.+|+||||++++||||+
T Consensus 90 P~~~~l~~~~~~i~~~l~~~~~~~VlVHC~aG~gRTGt~ia~yL~~ 135 (324)
T 1d5r_A 90 PQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLH 135 (324)
T ss_dssp CCHHHHHHHHHHHHHHHTTTSCSEEEEECSSSSHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCChhHHHHHHHHHH
Confidence 666788888888888774 46899999999999999999999986
No 37
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=99.65 E-value=1.1e-15 Score=100.62 Aligned_cols=112 Identities=18% Similarity=0.289 Sum_probs=87.2
Q ss_pred HhcCCCccccccCcEEEeCCCCcccHHHHHhcCCCEEEEcccCccc-ccccChhhhhhcCCeEEEeeCCCCCCCchHHHH
Q psy7473 19 KVTSRRWYDRIDENIILGALPFKRLTNKLLEENVKGVVSMNEDYEL-YFANGREEWNKVGVEFLQLSTRDIFDTPDQDKL 97 (136)
Q Consensus 19 ~~~~~~~~~~i~~~l~~g~~~~~~~~~~l~~~gi~~Vi~l~~~~~~-~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~ 97 (136)
.+...+++++|+|+||+|+++...+...|.+.|++.||+++.+.+. ..+...+..+..|.+++++|+ |.. .+..+.+
T Consensus 8 ~l~~~~n~~~V~~~l~~s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~-Dv~-~~~~~~v 85 (157)
T 3gxh_A 8 NLQGIRALQQQAPQLLSSGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPV-DWQ-NPKVEDV 85 (157)
T ss_dssp TTTTSTTCEEEETTEEEEBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCC-CTT-SCCHHHH
T ss_pred hhhcCcChheecCceeEcCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecC-CCC-CCCHHHH
Confidence 4677888999999999999999999999999999999999876542 111113345567999999999 444 4455777
Q ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 98 ERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 98 ~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+++++.+.+. .|++|||||.+| .|++.+.++|+++
T Consensus 86 ~~~~~~i~~~--~G~dVLVnnAgg-~r~~~l~~~~~~~ 120 (157)
T 3gxh_A 86 EAFFAAMDQH--KGKDVLVHCLAN-YRASAFAYLYQLK 120 (157)
T ss_dssp HHHHHHHHHT--TTSCEEEECSBS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhc--CCCCEEEECCCC-CCHHHHHHHHHHH
Confidence 7777776542 356999999977 5999999999875
No 38
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=99.63 E-value=9.8e-16 Score=110.32 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=70.4
Q ss_pred ccCc-EEEeCCCC---cccHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCC-C-----c------
Q psy7473 29 IDEN-IILGALPF---KRLTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFD-T-----P------ 92 (136)
Q Consensus 29 i~~~-l~~g~~~~---~~~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~-~-----~------ 92 (136)
|-++ ||.++.+. ..+...|+++||++|||++++.|.... .+.....|++++++|+.+... . +
T Consensus 42 vr~G~lyRS~~l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~--~pd~~~~Gi~~~~iPi~~~~~~~~~~~~p~~~~~~ 119 (296)
T 1ywf_A 42 LRPGRLFRSSELSRLDDAGRATLRRLGITDVADLRSSREVARR--GPGRVPDGIDVHLLPFPDLADDDADDSAPHETAFK 119 (296)
T ss_dssp SCTTSEEEESCCTTCCHHHHHHHHHHTCCEEEECCCHHHHHHH--CSCCCCTTCEEEECCCCCSCC--------------
T ss_pred ccCcceeccCCcccCCHHHHHHHHhCCCCEEEECcChhhhhcc--CCCCCCCCCEEEEecCccccccccccccchhhHHH
Confidence 6666 89999876 567778999999999999987763100 011235799999999987531 0 0
Q ss_pred -------------h---------HHHH--------------HHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 93 -------------D---------QDKL--------------ERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 93 -------------~---------~~~~--------------~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
. .+.+ ..+.++++...+ ++||||||++|++|||++++++|.
T Consensus 120 ~~~~~~~~~g~~~~~~~~~~~~~~~~m~~~Y~~~~~~~~~~~~~~~~l~~l~~-~~pvl~HC~aGkDRTG~~~alll~ 196 (296)
T 1ywf_A 120 RLLTNDGSNGESGESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVVTLLAA-GRPVLTHCFAGKDRTGFVVALVLE 196 (296)
T ss_dssp -----------------CCCHHHHHHHHHHHHHGGGSTTHHHHHHHHHHHHHT-TCCEEEECSSSSSHHHHHHHHHHH
T ss_pred HHhhhcccccccchhhhcccchHHHHHHHHHHHHHhcchhHHHHHHHHHHhcc-CCCEEEECCCCCccccHHHHHHHH
Confidence 0 0001 122233333333 799999999999999999999885
No 39
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=99.59 E-value=1e-14 Score=106.57 Aligned_cols=103 Identities=14% Similarity=0.198 Sum_probs=79.3
Q ss_pred cccccCcEEEeCCCCccc-------H----HHHHh--cCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCc
Q psy7473 26 YDRIDENIILGALPFKRL-------T----NKLLE--ENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTP 92 (136)
Q Consensus 26 ~~~i~~~l~~g~~~~~~~-------~----~~l~~--~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~ 92 (136)
.+.|+++|...+.|.... . ..|.. .+.-.|+||+++.. +..+.+ ..++.++|++|.. +|
T Consensus 27 ltyIT~riIam~~P~~~~e~~yRn~i~dv~~~L~~~h~~~y~V~NL~sE~~----Yd~~~f---~~~v~~~p~pD~~-~P 98 (339)
T 3v0d_A 27 LTYVTDHVIAMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSERG----YDETKF---DNHVYRVMIDDHN-VP 98 (339)
T ss_dssp EEEEETTEEEECCEESSSCCTTSEEHHHHHHHHHHHSTTCEEEEEEETTCC----CCGGGG---TTCEEEEEECTTS-CC
T ss_pred EEEEecCEEEEECCCCCchhhccCCHHHHHHHHHHhCCCceEEEECCCCCC----CChHHc---CCeEEEeccCCCC-CC
Confidence 789999999999986542 1 12333 45679999986532 123333 2467889999997 67
Q ss_pred hHHHHHHHHHHHHHHHHcC--CeEEEEcCCCCChHHHHHHHHhhcC
Q psy7473 93 DQDKLERGVDFIQRISKTG--GTVYVHCKAGRTRSATLVGCYLMKC 136 (136)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~--~~VlVHC~~G~~RS~~v~~ayLm~~ 136 (136)
..+.+.++++.+++.++++ ++|+|||.+|+||||++++||||+.
T Consensus 99 ~~~~l~~~~~~v~~~l~~~~~~~v~vHC~~G~gRtg~~ia~~Li~~ 144 (339)
T 3v0d_A 99 TLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLED 144 (339)
T ss_dssp CHHHHHHHHHHHHHHHHTCTTCEEEEECSSSSHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCcchHHHHHHHHHHh
Confidence 7788999999999988653 7999999999999999999999863
No 40
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=99.54 E-value=3.6e-14 Score=104.37 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=75.2
Q ss_pred CccccccCcEEEeCCCCcccH-----------HHHHh--cCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCC
Q psy7473 24 RWYDRIDENIILGALPFKRLT-----------NKLLE--ENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFD 90 (136)
Q Consensus 24 ~~~~~i~~~l~~g~~~~~~~~-----------~~l~~--~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~ 90 (136)
...+.|+++|...+.|..... ..|.. .+.-.|+||++... ....+.. +++++|++|..
T Consensus 22 LDltyIT~riIam~~P~~~~e~~yrn~i~~v~~~L~~~H~~~y~V~NLse~~Y-----d~~~f~~---~V~~~~~pD~~- 92 (361)
T 3n0a_A 22 LDFTYVTSRIIVMSFPLDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSY-----RTAKFHS---RVSECSWPIRQ- 92 (361)
T ss_dssp CEEEESSSSEEEEEC------------CHHHHHHHHHHHTTCEEEEECSSSCC-----GGGSCGG---GEEECCCCSSS-
T ss_pred ccEEEEcCCEEEEECCCCCchhhhcCCHHHHHHHHHHhCCCeEEEEECCCCCC-----ChhhcCC---cEEEeecCCCC-
Confidence 347899999999888875321 12333 47889999975422 1222222 57889999987
Q ss_pred CchHHHHHHHHHHHHHHHH--cCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 91 TPDQDKLERGVDFIQRISK--TGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 91 ~~~~~~~~~~~~~i~~~~~--~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
.|..+.+.++++.|++.++ ++++|+|||.+|+||||++++||||+
T Consensus 93 ~P~l~~l~~~~~~i~~~l~~~~~~~v~VHC~aG~GRtg~~ia~~Li~ 139 (361)
T 3n0a_A 93 APSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIF 139 (361)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCccHHHHHHHHHHH
Confidence 6778889999999998874 35689999999999999999999986
No 41
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=99.47 E-value=7.9e-14 Score=100.33 Aligned_cols=63 Identities=17% Similarity=0.310 Sum_probs=55.5
Q ss_pred hhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 70 REEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 70 ~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.+.++..|++|+++|+.|.. .|..+.+++++++++. +..+++++|||.+|+|||++++++|+|
T Consensus 174 ~e~~~~~Gl~Y~rlPi~D~~-aP~~e~id~fl~~v~~-l~~~~~i~vHC~aG~GRTgt~ma~y~l 236 (314)
T 3mmj_A 174 QEVAEAAGMRYFRIAATDHV-WPTPENIDRFLAFYRT-LPQDAWLHFHSEAGVGRTTAFMVMTDM 236 (314)
T ss_dssp HHHHHHTTCEEEEEEECTTS-CCCHHHHHHHHHHHHT-CCTTCEEEEECSSSSHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEeCcCCCC-CCCHHHHHHHHHHHHH-cCCCCCEEEECCCCCchHHHHHHHHHH
Confidence 45567899999999999998 7888899999999987 455689999999999999999999965
No 42
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=99.35 E-value=9.6e-13 Score=101.94 Aligned_cols=64 Identities=19% Similarity=0.432 Sum_probs=56.9
Q ss_pred hhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 70 REEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 70 ~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
.+.++..|++|+++|+.|.. .|..+.+++++++++.. ..++.++|||.+|+|||+|+.++|+|.
T Consensus 491 ~e~~~~~Gi~Y~Ripi~D~~-aP~~e~id~fl~~v~~l-p~~~~v~vHC~aG~GRTtT~mv~y~m~ 554 (629)
T 3f41_A 491 QQLVEKNGLHYYRIAATDHI-WPSAANIDEFINFTRTM-PANAWLHFHCQAGAGRTTAYMAMYDMM 554 (629)
T ss_dssp HHHHHHTTCEEEEEEECTTS-CCCHHHHHHHHHHHHHS-CTTCEEEEECSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEeCCCCCC-CCCHHHHHHHHHHHHhc-CCCCCEEEeCCCCCchHHHHHHHHHHH
Confidence 34577899999999999998 88888999999999884 556899999999999999999999764
No 43
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=99.33 E-value=1.1e-12 Score=101.61 Aligned_cols=64 Identities=20% Similarity=0.378 Sum_probs=56.9
Q ss_pred hhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 70 REEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 70 ~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
.+.++..|+.|+++|+.|.. .|..+.++.++++++. +..++.+.|||.+|+|||+|++++|+|.
T Consensus 193 ~el~~~~Gl~Y~Ripi~D~~-~P~~e~id~fl~~v~~-l~~~~~i~vHC~AG~GRTgT~m~~y~m~ 256 (629)
T 3f41_A 193 EEMVKQHGANYFRLTLQDHF-RPDDPDVDKFLEFYKS-LPKDAWLHYHCYAGMGRTTIFMVMHDIL 256 (629)
T ss_dssp HHHHHTTTCEEEEEEECTTS-CCCHHHHHHHHHHHHT-SCTTCEEEEECSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhCCCeEEEccCCCCC-CCCHHHHHHHHHHHHh-cCCCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 34477899999999999998 8888899999999988 4556899999999999999999999875
No 44
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=99.23 E-value=6.4e-11 Score=85.02 Aligned_cols=51 Identities=22% Similarity=0.211 Sum_probs=38.7
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH---HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS---KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~---~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||+++++++|
T Consensus 188 ~WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiai~~~ 241 (291)
T 2hc1_A 188 VWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRI 241 (291)
T ss_dssp CCCSSSCCSCHHHHHHHHHHHHHHHHHSSCCCCEEEECSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCchhHHHHHHHHH
Confidence 3677775556666666666665543 24689999999999999999999876
No 45
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=99.19 E-value=2.5e-11 Score=86.98 Aligned_cols=52 Identities=23% Similarity=0.294 Sum_probs=41.6
Q ss_pred eeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 83 LSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 83 ~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
..|+|.+.++..+.+.++++.+++....++||+|||.+|+||||++++++.+
T Consensus 181 ~~WpD~gvP~~~~~~l~~i~~v~~~~~~~~PivVHCsaGvGRTGtfia~d~~ 232 (287)
T 2b49_A 181 VAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETA 232 (287)
T ss_dssp CCSCSSSCCSSCHHHHHHHHHHHHHCCTTCCEEEECSSSSHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhccCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 3678877565667777777777776656799999999999999999998653
No 46
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A
Probab=99.17 E-value=1.7e-10 Score=82.96 Aligned_cols=49 Identities=24% Similarity=0.442 Sum_probs=33.4
Q ss_pred eeCCCCCCCchHHHHHHHHHHHHHH----HHcCCeEEEEcCCCCChHHHHHHHH
Q psy7473 83 LSTRDIFDTPDQDKLERGVDFIQRI----SKTGGTVYVHCKAGRTRSATLVGCY 132 (136)
Q Consensus 83 ~p~~D~~~~~~~~~~~~~~~~i~~~----~~~~~~VlVHC~~G~~RS~~v~~ay 132 (136)
..|+|.+ .|.......++++++.. ...++||+|||.+|+||||+++++.
T Consensus 185 ~~WPD~g-vP~~~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid 237 (295)
T 2gjt_A 185 TAWPDHG-VPTANAAESILQFVHMVRQQATKSKGPMIIHCSAGVGRTGTFIALD 237 (295)
T ss_dssp CCCCCSS-SCCHHHHHHHHHHHHHHHHHHHHCCSCEEEESSSSSHHHHHHHHHH
T ss_pred cCCCCCC-CCCcccHHHHHHHHHHHHHhhccCCCcEEEEECCCCccchHHHHHH
Confidence 3577776 44332334444444332 2467899999999999999999884
No 47
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=99.13 E-value=3.1e-10 Score=83.13 Aligned_cols=52 Identities=23% Similarity=0.215 Sum_probs=39.5
Q ss_pred eeCCCCCCCchHHHHHHHHHHHHHHHH---cCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 83 LSTRDIFDTPDQDKLERGVDFIQRISK---TGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 83 ~p~~D~~~~~~~~~~~~~~~~i~~~~~---~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
..|+|.+.++....+..++..+++..+ .++||+|||.+|+||||++++...+
T Consensus 206 ~~WPD~gvP~~~~~ll~f~~~v~~~~~~~~~~~PiVVHCSAGvGRTGtfiaid~~ 260 (342)
T 3i36_A 206 TSWPDHGVPDTTDLLINFRYLVRDYMKQIPPESPILVHCSAGVGRTGTFIAIDRL 260 (342)
T ss_dssp CCSCSSSSCSCSHHHHHHHHHHHHHHTTSCSSCCEEEESSSSSHHHHHHHHHHHH
T ss_pred cCcCcCCCCCCHHHHHHHHHHHHHHHHhCCCCCCEEEEcCCCChHHHHHHHHHHH
Confidence 357787756566667666666666542 4689999999999999999997654
No 48
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Probab=99.12 E-value=3.7e-11 Score=86.90 Aligned_cols=51 Identities=14% Similarity=0.112 Sum_probs=35.9
Q ss_pred eeCCCCCCCchHHHHHHHHHHHHHHH-HcCCeEEEEcCCCCChHHHHHHHHh
Q psy7473 83 LSTRDIFDTPDQDKLERGVDFIQRIS-KTGGTVYVHCKAGRTRSATLVGCYL 133 (136)
Q Consensus 83 ~p~~D~~~~~~~~~~~~~~~~i~~~~-~~~~~VlVHC~~G~~RS~~v~~ayL 133 (136)
..|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||+++++..
T Consensus 191 ~~WPD~gvP~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~ 242 (309)
T 2p6x_A 191 KNWPDHDVPSSIDPILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDY 242 (309)
T ss_dssp CCCCCTTCGGGGHHHHHHHHHHHHHCCSCSSCEEEECSSSSSHHHHHHHHHH
T ss_pred eccccCCCCCCHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcHHHHHHHHHH
Confidence 35778764444555555555444432 2468999999999999999999864
No 49
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=99.11 E-value=7e-11 Score=84.53 Aligned_cols=51 Identities=22% Similarity=0.218 Sum_probs=38.9
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH---HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS---KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~---~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
+|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||++++++++
T Consensus 174 ~WpD~~vP~~~~~~l~~~~~v~~~~~~~~~~~pivVHCsaGvGRTGtfia~~~~ 227 (284)
T 1fpr_A 174 SWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDML 227 (284)
T ss_dssp CSCTTSCCSCSHHHHHHHHHHHHHHTTSTTCCCEEEESSBSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 6778775555566666666665543 25789999999999999999999765
No 50
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=99.10 E-value=1.6e-10 Score=83.82 Aligned_cols=53 Identities=21% Similarity=0.223 Sum_probs=40.5
Q ss_pred EeeCCCCCCCchHHHHHHHHHHHHHHH---HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 82 QLSTRDIFDTPDQDKLERGVDFIQRIS---KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 82 ~~p~~D~~~~~~~~~~~~~~~~i~~~~---~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
..+|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||++++++++
T Consensus 207 y~~WpD~gvP~~~~~~l~fl~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 262 (316)
T 3b7o_A 207 FRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDIL 262 (316)
T ss_dssp ECCCCSSSCCSSSHHHHHHHHHHHHHHHTSTTCCCEEEEESSSSHHHHHHHHHHHH
T ss_pred ccCcccCCCCCChHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 346888875656666766666665543 35789999999999999999998764
No 51
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=99.10 E-value=8.8e-11 Score=82.71 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=37.0
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH--HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS--KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~--~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.++|.+.++....+.++++.+.+.. ..++||+|||.+|+||||+++++++|
T Consensus 147 ~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~pivVHCsaGvGRTGtfia~~~~ 199 (253)
T 1p15_A 147 GWPEVGIPSDGKGMINIIAAVQKQQQQSGNHPITVHCSAGAGRTGTFCALSTV 199 (253)
T ss_dssp CSCSSSCCSSSCSHHHHHHHHHHHTTTTTSCCEEEESSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhhccCCCCEEEEcCCCCchhHHHHHHHHH
Confidence 5777775544445555555554432 35689999999999999999999876
No 52
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=99.09 E-value=1.9e-10 Score=82.37 Aligned_cols=51 Identities=22% Similarity=0.229 Sum_probs=39.9
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHHH---cCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRISK---TGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~~---~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.+.....+.++++.+++..+ .++||+|||.+|+||||+++++.++
T Consensus 176 ~Wpd~gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 229 (288)
T 4grz_A 176 SWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDML 229 (288)
T ss_dssp SCCTTSCCSSSHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHHHHHHHHHHHH
T ss_pred CcCcCCcccChHHHHHHHHHHHHHHhhcCCCCcEEEEeCCCCcHHHHHHHHHHH
Confidence 47777755566777777777765443 4789999999999999999999875
No 53
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=99.08 E-value=2e-10 Score=82.77 Aligned_cols=50 Identities=30% Similarity=0.341 Sum_probs=37.0
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. .++||+|||.+|+||||++++++++
T Consensus 193 ~Wpd~gvP~~~~~~l~~~~~v~~~~-~~~PivVHCsaGvGRTGtfiai~~~ 242 (302)
T 4az1_A 193 GWPDHGIPQSATSLEALLTNVKNSP-TTVPVVVHCSAGIGRTGTLIGAYAA 242 (302)
T ss_dssp SSCTTSCCSCHHHHHHHHHHHHHSC-TTSCEEEESSSSSSHHHHHHHHHHH
T ss_pred CCCcCCccCCHHHHHHHHHHHHHhC-CCCCEEEECCCCCcHHHHHHHHHHH
Confidence 3667665555666666555554433 4589999999999999999998775
No 54
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=99.07 E-value=1.7e-10 Score=83.36 Aligned_cols=53 Identities=25% Similarity=0.350 Sum_probs=38.9
Q ss_pred EEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 81 LQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 81 ~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
+...|+|.+.++....+.++++.+++. ..++||+|||.+|+||||++++++++
T Consensus 193 ~y~~WpD~gvP~~~~~~l~~~~~v~~~-~~~~PivVHCsaGvGRTGtfiai~~~ 245 (306)
T 3m4u_A 193 QYVGWPDHGVPESAASFDELLSVIKNC-VTTSPILVHCSAGIGRTGTLIGAYAA 245 (306)
T ss_dssp EECSCCTTSCCSCHHHHHHHHHHHHTC-CCSSCEEEECSSSSHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHhh-CCCCCEEEEcCCCCcchheeehHHHH
Confidence 334577877555666666666555443 23589999999999999999998875
No 55
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=99.06 E-value=2.9e-10 Score=81.80 Aligned_cols=89 Identities=19% Similarity=0.215 Sum_probs=58.9
Q ss_pred HHHhcCCCEEEEcccCccc------ccccChhhh---------------------------hhcCCeEEEe-eCCCCCCC
Q psy7473 46 KLLEENVKGVVSMNEDYEL------YFANGREEW---------------------------NKVGVEFLQL-STRDIFDT 91 (136)
Q Consensus 46 ~l~~~gi~~Vi~l~~~~~~------~~~~~~~~~---------------------------~~~~i~~~~~-p~~D~~~~ 91 (136)
.+-+.+++.||.|+...|. +|+.....+ +...+.+.++ .|+|.+.+
T Consensus 120 MVwe~~~~~IVmLt~~~e~~~kc~~YwP~~~~~~g~~~V~~~~~~~~~~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP 199 (297)
T 1jln_A 120 MVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVTGVTECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTP 199 (297)
T ss_dssp HHHHTTCCEEEECSCSBSSSBCCCCCSCSSEEEETTEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCSCTTSSC
T ss_pred HHHhcCCCEEEECCCcccCccchhhhcCCCCccCCCEEEEEEeeeecCCEEEEEEEEEecCCCeEEEEccccCCCCCCCC
Confidence 4667899999999976542 344321111 0122333333 47887755
Q ss_pred chHHHHHHHHHHHHHHH---HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 92 PDQDKLERGVDFIQRIS---KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 92 ~~~~~~~~~~~~i~~~~---~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
+....+.++++.+++.. ..++||+|||.+|+||||++++++++
T Consensus 200 ~~~~~ll~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfia~~~~ 245 (297)
T 1jln_A 200 DSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSIG 245 (297)
T ss_dssp SCSHHHHHHHHHHHHHHHTCTTSCCEEEESSSSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhcCCCCCEEEEeCCCchhhHHHHHHHHH
Confidence 56666777777666543 35689999999999999999998764
No 56
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=99.06 E-value=2.9e-10 Score=82.43 Aligned_cols=50 Identities=26% Similarity=0.413 Sum_probs=38.5
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++..+.+.++++.++.. ..++||+|||.+|+||||++++++++
T Consensus 213 ~WPD~gvP~~~~~ll~~i~~v~~~-~~~~PivVHCsaGvGRTGtfiaid~~ 262 (315)
T 1wch_A 213 AWPDHDTPSQPDDLLTFISYMRHI-HRSGPIITHCSAGIGRSGTLICIDVV 262 (315)
T ss_dssp SCCTTSCCSCHHHHHHHHHHHHHH-CCSSCEEEECSSSSHHHHHHHHHHHH
T ss_pred ecCCCCCCCCHHHHHHHHHHHHhh-CCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 577777555566676666666543 34689999999999999999998764
No 57
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}
Probab=99.06 E-value=4.1e-10 Score=81.80 Aligned_cols=50 Identities=22% Similarity=0.186 Sum_probs=37.9
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHHH-cCCeEEEEcCCCCChHHHHHHHHh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRISK-TGGTVYVHCKAGRTRSATLVGCYL 133 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~~-~~~~VlVHC~~G~~RS~~v~~ayL 133 (136)
.|+|.+.++....+.++++.+++... .++||+|||.+|+||||+++++..
T Consensus 209 ~WPD~gvP~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~ 259 (320)
T 2i75_A 209 AWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITMET 259 (320)
T ss_dssp CCCSSSSCSCTHHHHHHHHHHHHHHTTCCSCEEEECSSSSSHHHHHHHHHH
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHhccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 57787755556666666666665442 368999999999999999998753
No 58
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=99.05 E-value=2.9e-10 Score=81.42 Aligned_cols=51 Identities=24% Similarity=0.220 Sum_probs=36.0
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH-HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS-KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~-~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+.+.. ..++||+|||.+|+||||+++++++|
T Consensus 184 ~WpD~gvP~~~~~ll~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiai~~~ 235 (286)
T 2ooq_A 184 SWPDHGVPCYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTM 235 (286)
T ss_dssp SCCTTCCCSCSHHHHHHHHHHHHHSCTTSCCEEEECSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEeCCCCcHHHHHHHHHHH
Confidence 4777765544555554444444332 24689999999999999999998776
No 59
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S
Probab=99.03 E-value=1.7e-10 Score=85.70 Aligned_cols=58 Identities=22% Similarity=0.367 Sum_probs=42.5
Q ss_pred CeEEEee-CCCCCCCchHHHHHHHHHHHHHHHH---------cCCeEEEEcCCCCChHHHHHHHHhhc
Q psy7473 78 VEFLQLS-TRDIFDTPDQDKLERGVDFIQRISK---------TGGTVYVHCKAGRTRSATLVGCYLMK 135 (136)
Q Consensus 78 i~~~~~p-~~D~~~~~~~~~~~~~~~~i~~~~~---------~~~~VlVHC~~G~~RS~~v~~ayLm~ 135 (136)
+.+++++ |+|.+.++..+.+.++++.+++..+ ..+|++|||.+|+||||+++++++|+
T Consensus 271 V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~PivVHCsAGvGRTGtfiaidll~ 338 (383)
T 1g4w_R 271 IPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLK 338 (383)
T ss_dssp EEEEEECSCCTTSCCSSHHHHHHHHHHHHTSCCCCCTTCSCTTSSCCEEESSSSSHHHHHHHHHHHHH
T ss_pred EEEEeeCCcCCcCCCCCHHHHHHHHHHHHHHHhhhccccccCCCCCEEEEeCcCCcHHHHHHHHHHHH
Confidence 4455566 8888755566666666666655432 24789999999999999999999874
No 60
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2
Probab=99.03 E-value=3.8e-10 Score=81.40 Aligned_cols=51 Identities=24% Similarity=0.221 Sum_probs=37.4
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH-HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS-KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~-~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||+++++.++
T Consensus 197 ~WpD~gvP~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 248 (302)
T 1yfo_A 197 SWPDFGVPFTPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAM 248 (302)
T ss_dssp CCCSSSCCSCSHHHHHHHHHHHHHSCTTSCCEEEECSSSSHHHHHHHHHHHH
T ss_pred ccCCCCcCCCHHHHHHHHHHHHHhccCCCCCEEEECCCCCcHHHHHHHHHHH
Confidence 5777765555555666665555432 24689999999999999999998765
No 61
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens}
Probab=99.03 E-value=6.1e-10 Score=81.08 Aligned_cols=51 Identities=25% Similarity=0.260 Sum_probs=38.2
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH-----------HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS-----------KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~-----------~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+-++++.++... ..++||+|||.+|+||||+++++.++
T Consensus 214 ~WPD~gvP~~~~~~l~fl~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 275 (325)
T 2bzl_A 214 DWPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLEGTKNRHPPIVVHCSAGVGRTGVLILSELM 275 (325)
T ss_dssp CCCSSSCCSCHHHHHHHHHHHHHHHHHHTGGGTTSCCCCCCEEEESSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhhcccccccCCCCCEEEEeCCCCcHHHHHHHHHHH
Confidence 4777775656666666666665432 24689999999999999999998875
No 62
>4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A*
Probab=99.01 E-value=1.7e-10 Score=83.64 Aligned_cols=54 Identities=20% Similarity=0.189 Sum_probs=39.5
Q ss_pred EEeeCCCCCCCchHHHHHHHHHHHHHHHH--------------cCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 81 LQLSTRDIFDTPDQDKLERGVDFIQRISK--------------TGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 81 ~~~p~~D~~~~~~~~~~~~~~~~i~~~~~--------------~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
+...|+|.+.+.....+-++++.+++..+ .++||+|||++|+||||++++.-.+
T Consensus 189 ~y~~WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCSaGvGRTGtfiaid~~ 256 (314)
T 4ge6_A 189 QFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDIC 256 (314)
T ss_dssp EECCSCSSSCCSCSHHHHHHHHHHHHHHHHHHHHSCCC----CCSCCEEEECSSSSHHHHHHHHHHHH
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHHHhhhhccccccccccCCCCCEEEECCCCCcHHHHHHHHHHH
Confidence 33458888766666777777766655421 2469999999999999999987543
No 63
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.01 E-value=5.8e-10 Score=80.45 Aligned_cols=49 Identities=24% Similarity=0.247 Sum_probs=35.0
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH-HcCCeEEEEcCCCCChHHHHHHHH
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS-KTGGTVYVHCKAGRTRSATLVGCY 132 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~-~~~~~VlVHC~~G~~RS~~v~~ay 132 (136)
.|+|.+.++..+.+-++++.+++.. ..++||+|||.+|+||||++++++
T Consensus 198 ~WpD~gvP~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid 247 (303)
T 2oc3_A 198 SWPDRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVD 247 (303)
T ss_dssp CCCSSSCCSCSHHHHHHHHHHHHHHCSSCCCEEEECSSSSHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhcCCCCcEEEEECCCCcceeEEEeHH
Confidence 4677665555555555555444433 246899999999999999999997
No 64
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A
Probab=99.01 E-value=3e-10 Score=82.12 Aligned_cols=51 Identities=22% Similarity=0.277 Sum_probs=36.3
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH---HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS---KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~---~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||++++++++
T Consensus 203 ~WpD~gvP~~~~~ll~~i~~v~~~~~~~~~~~PIvVHCsaGvGRTGtfiai~~~ 256 (309)
T 1zc0_A 203 AWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIG 256 (309)
T ss_dssp SCCTTSCCSCHHHHHHHHHHHHTSCCCCSSCCCEEEEESSSSHHHHHHHHHHHH
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEeCCCcchhHHHHHHHHH
Confidence 4677765555555555555444321 34689999999999999999999875
No 65
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Probab=99.00 E-value=3.3e-10 Score=81.65 Aligned_cols=51 Identities=16% Similarity=0.112 Sum_probs=35.8
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH-HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS-KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~-~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||+++++.++
T Consensus 196 ~WPD~gvP~~~~~ll~~~~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 247 (301)
T 2i1y_A 196 SWPAEGTPASTRPLLDFRRKVNKCYRGRSCPIIVHCSDGAGRTGTYILIDMV 247 (301)
T ss_dssp CCCSSSBCSCSHHHHHHHHHHHHSCCCSSCCEEEECSSSSHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCEEEEECCCCchhHHHHHHHHH
Confidence 4677665555555555555444322 24689999999999999999998764
No 66
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2
Probab=98.99 E-value=6.4e-10 Score=80.61 Aligned_cols=50 Identities=18% Similarity=0.126 Sum_probs=35.0
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH---HcCCeEEEEcCCCCChHHHHHHHHh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS---KTGGTVYVHCKAGRTRSATLVGCYL 133 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~---~~~~~VlVHC~~G~~RS~~v~~ayL 133 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||++++++.
T Consensus 179 ~WpD~gvP~~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~ 231 (314)
T 1l8k_A 179 TWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDT 231 (314)
T ss_dssp CCCSSSCCSCSHHHHHHHHHHHHTTTTSTTSCCEEEEESSSSSHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhccCCCCcEEEEcCCCCcHHHHHHHHHH
Confidence 4677664545555555555544321 2468999999999999999999864
No 67
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ...
Probab=98.99 E-value=8.1e-10 Score=79.71 Aligned_cols=49 Identities=22% Similarity=0.171 Sum_probs=34.9
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH---HcCCeEEEEcCCCCChHHHHHHHH
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS---KTGGTVYVHCKAGRTRSATLVGCY 132 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~---~~~~~VlVHC~~G~~RS~~v~~ay 132 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||+++++.
T Consensus 184 ~WpD~gvP~~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid 235 (304)
T 2cm2_A 184 TWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLAD 235 (304)
T ss_dssp CCCSSSCCSSSHHHHHHHHHHHHHTTTSTTSBCEEEESSSSSSHHHHHHHHH
T ss_pred CcCcCCCCCCHHHHHHHHHHHHHHhhccCCCCcEEEEcCcCCchhhHHHHHH
Confidence 4677764555555655555554432 246899999999999999999875
No 68
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A*
Probab=98.99 E-value=9.1e-10 Score=79.50 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=37.1
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH----HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS----KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~----~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||+++++.++
T Consensus 200 ~WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 254 (305)
T 2cjz_A 200 SWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSAGIGRTGCFIATSIC 254 (305)
T ss_dssp CCCSSCCGGGHHHHHHHHHHHHHHHHHTCSSCCCEEEEESSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCEEEEeCCCcchhHHHHHHHHH
Confidence 4677664445556666666665421 25689999999999999999998765
No 69
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=98.98 E-value=9.5e-10 Score=79.46 Aligned_cols=51 Identities=24% Similarity=0.203 Sum_probs=38.6
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH-HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS-KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~-~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. ...+||+|||.+|+||||+++++..+
T Consensus 207 ~WPD~gvP~~~~~ll~fi~~v~~~~~~~~~PIvVHCsaGvGRTGtfiaid~~ 258 (307)
T 3s3e_A 207 TWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRI 258 (307)
T ss_dssp CCCSSSCCSSTHHHHHHHHHHHHHHCSCCSCEEEECSSSSHHHHHHHHHHHH
T ss_pred CcccCCCCCChHHHHHHHHHHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHH
Confidence 4677765666666666666666554 34679999999999999999997765
No 70
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A
Probab=98.94 E-value=1.1e-09 Score=79.62 Aligned_cols=49 Identities=29% Similarity=0.294 Sum_probs=34.9
Q ss_pred eeCCCCCCCchHHHHHHHHHHHHHHH----HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 83 LSTRDIFDTPDQDKLERGVDFIQRIS----KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 83 ~p~~D~~~~~~~~~~~~~~~~i~~~~----~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
..|+|.+.++... .+++++++.. ..++||+|||.+|+||||+++++.++
T Consensus 217 ~~WPD~gvP~~~~---~~l~~i~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 269 (320)
T 2h4v_A 217 TQWPDMGVPEYAL---PVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSM 269 (320)
T ss_dssp CCCCSSSSCSCSH---HHHHHHHHHHHTCCTTCCCEEEESSSSSHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCHH---HHHHHHHHHHhhccCCCCCEEEECCCCCcHHHHHHHHHHH
Confidence 3577776444443 3445555443 24689999999999999999998775
No 71
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Probab=98.90 E-value=3.3e-09 Score=81.77 Aligned_cols=51 Identities=24% Similarity=0.292 Sum_probs=38.5
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH---HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS---KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~---~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||+++++.++
T Consensus 416 ~Wpd~gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaG~GRTGtfia~d~~ 469 (532)
T 2b3o_A 416 SWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDML 469 (532)
T ss_dssp CCCSSSCCSSSHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCchhHHHHHHHHH
Confidence 4777765555666666666665543 25689999999999999999998765
No 72
>4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens}
Probab=98.90 E-value=2.2e-09 Score=79.00 Aligned_cols=50 Identities=22% Similarity=0.159 Sum_probs=35.6
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH---HcCCeEEEEcCCCCChHHHHHHHHh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS---KTGGTVYVHCKAGRTRSATLVGCYL 133 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~---~~~~~VlVHC~~G~~RS~~v~~ayL 133 (136)
.|+|.+.+.....+.++++.+++.. ..++||+|||.+|+||||+++++..
T Consensus 212 ~WPD~gvP~~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~ 264 (354)
T 4i8n_A 212 TWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADT 264 (354)
T ss_dssp SCCTTCCCSCHHHHHHHHHHHHHTTTTCTTSCCEEEECSSSSHHHHHHHHHHH
T ss_pred ccccCCccCCHHHHHHHHHHHHHHhhccCCCCCEEEEeCCCcchHHHHHHHHH
Confidence 4677665556665655555554432 1467999999999999999998754
No 73
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A
Probab=98.88 E-value=4.3e-09 Score=75.99 Aligned_cols=52 Identities=23% Similarity=0.220 Sum_probs=34.2
Q ss_pred eeCCCCCCCch--HHHHHHHHHHHHHHH--------------HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 83 LSTRDIFDTPD--QDKLERGVDFIQRIS--------------KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 83 ~p~~D~~~~~~--~~~~~~~~~~i~~~~--------------~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
..|+|.+.++. ...+.++++.+.+.. ...+|++|||++|+||||+++++..+
T Consensus 190 ~~WPD~gvP~~~~~~~ll~~l~~v~~~~~~~~~~~~~~~~~~~~~~piVVHCSAGvGRTGtfiaid~l 257 (306)
T 1lyv_A 190 GNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIGAMCM 257 (306)
T ss_dssp CCCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCGGGGCTTSSCCEEECSSSSSHHHHHHHHHHH
T ss_pred CCCCccCcCChhHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCCcEEEcCCCCchhHHHHHHHHH
Confidence 35777763332 344555555554321 02468899999999999999998765
No 74
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1
Probab=98.86 E-value=5.2e-09 Score=80.54 Aligned_cols=51 Identities=22% Similarity=0.262 Sum_probs=38.8
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH---HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS---KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~---~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||+++++.++
T Consensus 422 ~WPD~gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 475 (525)
T 2shp_A 422 TWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDIL 475 (525)
T ss_dssp CCCSSSCCSCHHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHHHHHHHHHHHH
T ss_pred CCCCCCcccChHHHHHHHHHHHHHHhccCCCCCEEEEcCCCCchhHHHHHHHHH
Confidence 4777775666666777776665543 25689999999999999999998654
No 75
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.86 E-value=5.9e-09 Score=81.10 Aligned_cols=51 Identities=14% Similarity=0.232 Sum_probs=39.6
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH---HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS---KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~---~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||+++++.++
T Consensus 470 ~WPD~gvP~~~~~~l~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 523 (575)
T 1lar_A 470 DWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIV 523 (575)
T ss_dssp CSCSSSCCSSCHHHHHHHHHHHHHHHHTTCCSCEEEESSSSSSHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEECCCCchHHHHHHHHHH
Confidence 3778776666667777777666554 24689999999999999999998765
No 76
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}
Probab=98.84 E-value=5.3e-09 Score=81.64 Aligned_cols=52 Identities=23% Similarity=0.250 Sum_probs=39.3
Q ss_pred eeCCCCCCCchHHHHHHHHHHHHHHHH---cCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 83 LSTRDIFDTPDQDKLERGVDFIQRISK---TGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 83 ~p~~D~~~~~~~~~~~~~~~~i~~~~~---~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
..|+|.+.+.....+..+++.+.+... ..+||+|||.+|+||||+++++..+
T Consensus 415 ~~WPD~gvP~~~~~~l~fl~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 469 (595)
T 3ps5_A 415 LSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDML 469 (595)
T ss_dssp CCCCSSSSCSCSHHHHHHHHHHHHHHHHCTTCCCEEEECSSSSHHHHHHHHHHHH
T ss_pred CCcccCCccCCHHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCchHHHHHHHHHH
Confidence 347787756566666666666665432 5689999999999999999998654
No 77
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=98.84 E-value=6.9e-09 Score=81.05 Aligned_cols=51 Identities=18% Similarity=0.240 Sum_probs=39.6
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH--HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS--KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~--~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||+++++.++
T Consensus 489 ~WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 541 (599)
T 2jjd_A 489 GWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNI 541 (599)
T ss_dssp CSCSSSCCSCCHHHHHHHHHHHHHHHHSTTCCEEEECSSSSSHHHHHHHHHHH
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHhccCCCcEEEEeCCCCchHHHHHHHHHH
Confidence 5788776666667777777776543 24689999999999999999998765
No 78
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.80 E-value=8.6e-09 Score=80.16 Aligned_cols=51 Identities=18% Similarity=0.153 Sum_probs=37.9
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH-HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS-KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~-~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.++... ..++||+|||.+|+||||+++++.+|
T Consensus 181 ~WpD~gvP~~~~~~l~~~~~v~~~~~~~~~pivVHCsaGvGRTGtfiaid~~ 232 (575)
T 1lar_A 181 AWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAM 232 (575)
T ss_dssp CSCSSSCCSCSHHHHHHHHHHHHHSCTTCCCEEEESSSSSSHHHHHHHHHHH
T ss_pred CCCCCCcccCHHHHHHHHHHHHHhcCCCCCCEEEEecCCCcceeEEEEhHHH
Confidence 4788775655666666666555432 24689999999999999999998765
No 79
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=98.79 E-value=6.4e-09 Score=81.39 Aligned_cols=51 Identities=8% Similarity=0.186 Sum_probs=37.1
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH-----------HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS-----------KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~-----------~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+.++....+.++++.+++.. ..++||+|||.+|+||||+++++.++
T Consensus 501 ~WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtf~ai~~~ 562 (610)
T 1ygr_A 501 NWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLIHCRDGSQQTGIFCALLNL 562 (610)
T ss_dssp SCCSSSCCSCHHHHHHHHHHHHTTSCCCC-------CCCCCEEEEESSSSTTHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCCCEEEEeCCCCcchhHHHHHHHH
Confidence 4777775556666665555554321 24589999999999999999998765
No 80
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=98.77 E-value=1.3e-08 Score=79.54 Aligned_cols=52 Identities=19% Similarity=0.177 Sum_probs=37.7
Q ss_pred EeeCCCCCCCchHHHHHHHHHHHHHHH-HcCCeEEEEcCCCCChHHHHHHHHh
Q psy7473 82 QLSTRDIFDTPDQDKLERGVDFIQRIS-KTGGTVYVHCKAGRTRSATLVGCYL 133 (136)
Q Consensus 82 ~~p~~D~~~~~~~~~~~~~~~~i~~~~-~~~~~VlVHC~~G~~RS~~v~~ayL 133 (136)
...|+|.+.+.....+.++++.++... ..++||+|||.+|+||||++++...
T Consensus 193 y~~WpD~gvP~~~~~~l~~~~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~ 245 (599)
T 2jjd_A 193 FTSWPDFGVPFTPIGMLKFLKKVKTLNPVHAGPIVVHCSAGVGRTGTFIVIDA 245 (599)
T ss_dssp ECCCCSSSCCSCSHHHHHHHHHHHHHSCTTCCCEEEECSSSSSHHHHHHHHHH
T ss_pred eCCCCCCCCCCChHHHHHHHHHHHhhccCCCceEEEEeCCCCcccchhhHHHH
Confidence 345777775556666666666665543 2468999999999999999998644
No 81
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=98.74 E-value=4.2e-09 Score=82.43 Aligned_cols=52 Identities=27% Similarity=0.200 Sum_probs=35.4
Q ss_pred eeCCCCCCCchHHHHHHHHHHHHHHH-HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 83 LSTRDIFDTPDQDKLERGVDFIQRIS-KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 83 ~p~~D~~~~~~~~~~~~~~~~i~~~~-~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
..|+|.+.++....+.++.+.+.... ..++||+|||.+|+||||+++++.++
T Consensus 194 ~~WPD~gvP~~~~~~l~~~~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 246 (610)
T 1ygr_A 194 TSWPDHGVPEDPHLLLKLRRRVNAFSNFFSGPIVVHSSAGVGRTGTYIGIDAM 246 (610)
T ss_dssp CSCCTTSCCSCHHHHHHHHHHHTTSCCTTCCCEEEECSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhhccCCCCeEEEcCCCCCchhhHHHHHHH
Confidence 35788775555554444443332211 24689999999999999999998765
No 82
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=98.62 E-value=3.7e-08 Score=77.33 Aligned_cols=49 Identities=29% Similarity=0.295 Sum_probs=34.7
Q ss_pred eeCCCCCCCchHHHHHHHHHHHHHHHH----cCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 83 LSTRDIFDTPDQDKLERGVDFIQRISK----TGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 83 ~p~~D~~~~~~~~~~~~~~~~i~~~~~----~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
..|+|.+.+.... .+++++++... .++||+|||.+|+||||+++++.++
T Consensus 199 ~~WPD~gvP~~~~---~ll~~i~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 251 (627)
T 2nlk_A 199 TQWPDMGVPEYAL---PVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSM 251 (627)
T ss_dssp CCCCSSSSCSCSH---HHHHHHHHHHHTCCSSCCCEEEECSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCcChH---HHHHHHHHHHhhccCCCceEEEEcCCCCCCccEEEEHHHH
Confidence 3577776554443 44555555432 4589999999999999999988654
No 83
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=98.58 E-value=7e-08 Score=75.77 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=34.2
Q ss_pred eCCCCCCCchHHHHHHHHHHHHHHH-HcCCeEEEEcCCCCChHHHHHHHHhh
Q psy7473 84 STRDIFDTPDQDKLERGVDFIQRIS-KTGGTVYVHCKAGRTRSATLVGCYLM 134 (136)
Q Consensus 84 p~~D~~~~~~~~~~~~~~~~i~~~~-~~~~~VlVHC~~G~~RS~~v~~ayLm 134 (136)
.|+|.+ .|... +.++++.+++.. ..++||+|||.+|+||||+++++.++
T Consensus 493 ~WPD~g-vP~~~-~~~li~~v~~~~~~~~~PivVHCsaGiGRtGtf~a~~~~ 542 (627)
T 2nlk_A 493 KWPNPD-APISS-TFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTL 542 (627)
T ss_dssp SSSCTT-SCGGG-HHHHHHHHHHHHTTCCSCEEEEESSSCHHHHHHHHHHHH
T ss_pred CCCCCC-cCChh-HHHHHHHHHHhhccCCCeEEEEeCCCCchHHHHHHHHHH
Confidence 366665 33322 345555555433 45689999999999999999998764
No 84
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=96.48 E-value=0.005 Score=45.07 Aligned_cols=49 Identities=24% Similarity=0.244 Sum_probs=41.2
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHH---cCCeEEEEcCCCCC--h--HHHHHHHHhhc
Q psy7473 86 RDIFDTPDQDKLERGVDFIQRISK---TGGTVYVHCKAGRT--R--SATLVGCYLMK 135 (136)
Q Consensus 86 ~D~~~~~~~~~~~~~~~~i~~~~~---~~~~VlVHC~~G~~--R--S~~v~~ayLm~ 135 (136)
.|.+ +....++-+++..+.+.++ ..++++|||..|.. | |+++++||+|.
T Consensus 49 ~dfg-p~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~r~naa~L~~~y~~~ 104 (348)
T 1ohe_A 49 ADFG-PLNLAMVYRYCCKINKKLKSITMLRKKIVHFTGSDQRKQANAAFLVGCYMVI 104 (348)
T ss_dssp SCCC-CCCHHHHHHHHHHHHHHHHCGGGTTSEEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred hhcC-CccHHHHHHHHHHHHHHHhChhhcCCEEEEECCCCchHHHHHHHHHHHHHHH
Confidence 6666 8888999999999999885 34799999999975 4 78999999985
No 85
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=95.89 E-value=0.029 Score=35.00 Aligned_cols=19 Identities=21% Similarity=0.207 Sum_probs=14.9
Q ss_pred HcCCeEEEEcCCCCChHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v 128 (136)
..+++|+|+|..|. ||...
T Consensus 72 ~~~~~ivv~C~sG~-RS~~a 90 (134)
T 1vee_A 72 PENTTLYILDKFDG-NSELV 90 (134)
T ss_dssp GGGCEEEEECSSST-THHHH
T ss_pred CCCCEEEEEeCCCC-cHHHH
Confidence 45689999999994 88543
No 86
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=95.78 E-value=0.017 Score=44.34 Aligned_cols=24 Identities=25% Similarity=0.469 Sum_probs=20.5
Q ss_pred HcCCeEEEEcCCCCChHHHHHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATLVGCY 132 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~~ay 132 (136)
.+|..|||||..|-+||+-+++.-
T Consensus 327 ~~g~sVLVhcsDGwDrT~ql~SLa 350 (512)
T 2yf0_A 327 VENASVLVHCSDGWDRTSQVCSLG 350 (512)
T ss_dssp TTCCCEEECTTTSSSHHHHHHHHH
T ss_pred hCCCeEEEECCCCccccHHHHHHH
Confidence 478999999999999998776643
No 87
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=95.39 E-value=0.033 Score=42.95 Aligned_cols=26 Identities=31% Similarity=0.418 Sum_probs=20.3
Q ss_pred HHHcC-CeEEEEcCCCCChHHHHHHHH
Q psy7473 107 ISKTG-GTVYVHCKAGRTRSATLVGCY 132 (136)
Q Consensus 107 ~~~~~-~~VlVHC~~G~~RS~~v~~ay 132 (136)
.+..+ ..|||||..|-+||+-+++.-
T Consensus 336 ~l~~~~~sVLvhcsdGwDrT~ql~SLa 362 (528)
T 1zsq_A 336 KVESGKTSVVVHSSDGWDRTAQLTSLA 362 (528)
T ss_dssp HHHTTCCCEEEECSSSSSHHHHHHHHH
T ss_pred HHHcCCceEEEECCCCccchHHHHHHH
Confidence 34444 699999999999998877643
No 88
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=94.93 E-value=0.053 Score=42.79 Aligned_cols=25 Identities=32% Similarity=0.462 Sum_probs=19.9
Q ss_pred HHcC-CeEEEEcCCCCChHHHHHHHH
Q psy7473 108 SKTG-GTVYVHCKAGRTRSATLVGCY 132 (136)
Q Consensus 108 ~~~~-~~VlVHC~~G~~RS~~v~~ay 132 (136)
+..+ ..|||||..|.+||+-+++.-
T Consensus 409 l~~~~~sVLVhcsDGwDrT~qlsSLa 434 (657)
T 1lw3_A 409 VESGKTSVVVHSSDGWDRTAQLTSLA 434 (657)
T ss_dssp HHTTCCCEEEECSSSSSHHHHHHHHH
T ss_pred HHcCCceEEEECCCCccchHHHHHHH
Confidence 4444 699999999999998877653
No 89
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=94.55 E-value=0.06 Score=32.87 Aligned_cols=17 Identities=41% Similarity=0.657 Sum_probs=12.9
Q ss_pred CeEEEEcCCCCChHHHHH
Q psy7473 112 GTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 112 ~~VlVHC~~G~~RS~~v~ 129 (136)
.+|+|+|..| .||...+
T Consensus 73 ~~ivv~C~~G-~rs~~a~ 89 (127)
T 3i2v_A 73 VPIYVICKLG-NDSQKAV 89 (127)
T ss_dssp EEEEEECSSS-SHHHHHH
T ss_pred CeEEEEcCCC-CcHHHHH
Confidence 3999999998 4875443
No 90
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=94.01 E-value=0.14 Score=30.48 Aligned_cols=21 Identities=24% Similarity=0.295 Sum_probs=15.8
Q ss_pred HHcCCeEEEEcCCCCChHHHHH
Q psy7473 108 SKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 108 ~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
+..+++|+|+|..|. ||..++
T Consensus 55 l~~~~~ivvyc~~g~-rs~~a~ 75 (108)
T 1gmx_A 55 NDFDTPVMVMCYHGN-SSKGAA 75 (108)
T ss_dssp SCTTSCEEEECSSSS-HHHHHH
T ss_pred cCCCCCEEEEcCCCc-hHHHHH
Confidence 356789999999995 875543
No 91
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=93.66 E-value=0.088 Score=33.32 Aligned_cols=18 Identities=28% Similarity=0.516 Sum_probs=12.6
Q ss_pred HcCCeEEEEcCCCCChHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSAT 127 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~ 127 (136)
..+.+|+|+|..| .||..
T Consensus 78 ~~~~~ivvyC~~G-~rS~~ 95 (148)
T 2fsx_A 78 QHERPVIFLCRSG-NRSIG 95 (148)
T ss_dssp ---CCEEEECSSS-STHHH
T ss_pred CCCCEEEEEcCCC-hhHHH
Confidence 4568999999999 58853
No 92
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=93.50 E-value=0.059 Score=33.67 Aligned_cols=65 Identities=14% Similarity=0.064 Sum_probs=34.6
Q ss_pred CCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCch---HHHHHHHHHHHHH-HHHcCCeEEEEcCCCCChHHH
Q psy7473 52 VKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPD---QDKLERGVDFIQR-ISKTGGTVYVHCKAGRTRSAT 127 (136)
Q Consensus 52 i~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~---~~~~~~~~~~i~~-~~~~~~~VlVHC~~G~~RS~~ 127 (136)
=..|||++++.+. .. .+--.-+++|+.+.. ... .+.+.+ .+.. ....+++|+|+|..| .||..
T Consensus 40 ~~~liDvR~~~e~------~~--ghIpgAinip~~~l~-~~~~~~~~~~~~---~~~~~~~~~~~~ivvyC~~G-~rs~~ 106 (139)
T 3d1p_A 40 NVVLVDVREPSEY------SI--VHIPASINVPYRSHP-DAFALDPLEFEK---QIGIPKPDSAKELIFYCASG-KRGGE 106 (139)
T ss_dssp TEEEEECSCHHHH------HH--CCCTTCEECCTTTCT-TGGGSCHHHHHH---HHSSCCCCTTSEEEEECSSS-HHHHH
T ss_pred CeEEEECcCHHHH------hC--CCCCCcEEcCHHHhh-hhccCCHHHHHH---HHhccCCCCCCeEEEECCCC-chHHH
Confidence 3579999987652 11 111122577877654 211 122222 2211 123568999999998 47754
Q ss_pred HH
Q psy7473 128 LV 129 (136)
Q Consensus 128 v~ 129 (136)
++
T Consensus 107 aa 108 (139)
T 3d1p_A 107 AQ 108 (139)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 93
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=91.91 E-value=0.062 Score=33.24 Aligned_cols=20 Identities=25% Similarity=0.483 Sum_probs=15.3
Q ss_pred HcCCeEEEEcCCCCChHHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~ 129 (136)
..+++|+|+|..| .||..++
T Consensus 80 ~~~~~ivvyC~~G-~rs~~aa 99 (129)
T 1tq1_A 80 GQSDNIIVGCQSG-GRSIKAT 99 (129)
T ss_dssp CTTSSEEEEESSC-SHHHHHH
T ss_pred CCCCeEEEECCCC-cHHHHHH
Confidence 4568999999999 4875543
No 94
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=91.17 E-value=0.45 Score=28.97 Aligned_cols=19 Identities=21% Similarity=0.553 Sum_probs=13.6
Q ss_pred HcC-CeEEEEcC-CCCChHHHH
Q psy7473 109 KTG-GTVYVHCK-AGRTRSATL 128 (136)
Q Consensus 109 ~~~-~~VlVHC~-~G~~RS~~v 128 (136)
..+ ++|+|+|. .| .||..+
T Consensus 86 ~~~~~~ivvyC~~~G-~rs~~a 106 (134)
T 3g5j_A 86 ALNYDNIVIYCARGG-MRSGSI 106 (134)
T ss_dssp HTTCSEEEEECSSSS-HHHHHH
T ss_pred ccCCCeEEEEECCCC-hHHHHH
Confidence 455 89999995 66 577543
No 95
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=90.83 E-value=0.26 Score=32.03 Aligned_cols=18 Identities=22% Similarity=0.399 Sum_probs=14.8
Q ss_pred CeEEEEcCCCCChHHHHH
Q psy7473 112 GTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 112 ~~VlVHC~~G~~RS~~v~ 129 (136)
++|+|||..|..||...+
T Consensus 105 ~~IVvyC~sG~~Rs~~aa 122 (169)
T 3f4a_A 105 LNVIFHCMLSQQRGPSAA 122 (169)
T ss_dssp EEEEEECSSSSSHHHHHH
T ss_pred CeEEEEeCCCCCcHHHHH
Confidence 689999999978986554
No 96
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=90.52 E-value=0.24 Score=34.56 Aligned_cols=20 Identities=20% Similarity=0.466 Sum_probs=15.1
Q ss_pred HcCCeEEEEcCCCCChHHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~ 129 (136)
..+++|+|+|..| .||...+
T Consensus 228 ~~~~~ivv~C~~G-~rs~~a~ 247 (280)
T 1urh_A 228 SYDKPIIVSCGSG-VTAAVVL 247 (280)
T ss_dssp CSSSCEEEECCSS-STHHHHH
T ss_pred CCCCCEEEECChH-HHHHHHH
Confidence 4568999999999 4775443
No 97
>3sxu_A DNA polymerase III subunit CHI; DNA replication, CHI binds to SSB and PSI, transferase; HET: DNA; 1.85A {Escherichia coli} SCOP: c.128.1.1 PDB: 1em8_A*
Probab=90.45 E-value=0.6 Score=29.87 Aligned_cols=42 Identities=12% Similarity=0.142 Sum_probs=29.9
Q ss_pred CeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 78 VEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 78 i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
+.+++++-.+. +........-+++.++++.++|.+|+|+|..
T Consensus 7 v~FY~L~~~~~-~~~l~~~~~~aCrL~~ka~~~G~rv~V~~~d 48 (150)
T 3sxu_A 7 ATFYLLDNDTT-VDGLSAVEQLVCEIAAERWRSGKRVLIACED 48 (150)
T ss_dssp EEEEECSCCCC-BTTBCHHHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEeCCCch-hhhhhHHHHHHHHHHHHHHHcCCeEEEECCC
Confidence 34455543332 2344567788999999999999999999974
No 98
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=90.07 E-value=0.4 Score=27.04 Aligned_cols=20 Identities=35% Similarity=0.476 Sum_probs=14.9
Q ss_pred HcCCeEEEEcCCCCChHHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~ 129 (136)
..+.+|+++|..| .||..++
T Consensus 39 ~~~~~ivv~C~~g-~rs~~aa 58 (85)
T 2jtq_A 39 DKNDTVKVYCNAG-RQSGQAK 58 (85)
T ss_dssp CTTSEEEEEESSS-HHHHHHH
T ss_pred CCCCcEEEEcCCC-chHHHHH
Confidence 4568999999998 4775443
No 99
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=89.21 E-value=0.4 Score=28.48 Aligned_cols=23 Identities=39% Similarity=0.641 Sum_probs=16.7
Q ss_pred HcCCeEEEEcCCCCChHHHHHHHHh
Q psy7473 109 KTGGTVYVHCKAGRTRSATLVGCYL 133 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~~ayL 133 (136)
..+++|+|+|..| .||.. ++.+|
T Consensus 54 ~~~~~ivv~C~~G-~rS~~-aa~~L 76 (103)
T 3iwh_A 54 NKNEIYYIVCAGG-VRSAK-VVEYL 76 (103)
T ss_dssp CTTSEEEEECSSS-SHHHH-HHHHH
T ss_pred cCCCeEEEECCCC-HHHHH-HHHHH
Confidence 4568999999999 58854 44444
No 100
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=86.45 E-value=0.54 Score=27.38 Aligned_cols=23 Identities=52% Similarity=0.752 Sum_probs=15.9
Q ss_pred HcCCeEEEEcCCCCChHHHHHHHHh
Q psy7473 109 KTGGTVYVHCKAGRTRSATLVGCYL 133 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~~ayL 133 (136)
..+.+|+++|..| .||.. ++..|
T Consensus 54 ~~~~~ivvyC~~g-~rs~~-a~~~L 76 (100)
T 3foj_A 54 NDNETYYIICKAG-GRSAQ-VVQYL 76 (100)
T ss_dssp CTTSEEEEECSSS-HHHHH-HHHHH
T ss_pred CCCCcEEEEcCCC-chHHH-HHHHH
Confidence 3568999999998 57744 44333
No 101
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=86.38 E-value=0.74 Score=26.89 Aligned_cols=20 Identities=35% Similarity=0.675 Sum_probs=15.1
Q ss_pred HcCCeEEEEcCCCCChHHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~ 129 (136)
..+.+|+++|..| .||..++
T Consensus 54 ~~~~~iv~yC~~g-~rs~~a~ 73 (103)
T 3eme_A 54 NKNEIYYIVCAGG-VRSAKVV 73 (103)
T ss_dssp CTTSEEEEECSSS-SHHHHHH
T ss_pred CCCCeEEEECCCC-hHHHHHH
Confidence 4568999999999 5875443
No 102
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=85.35 E-value=0.72 Score=28.05 Aligned_cols=24 Identities=17% Similarity=-0.015 Sum_probs=16.1
Q ss_pred HcCCeEEEEcCCCCChH-HHHHHHHh
Q psy7473 109 KTGGTVYVHCKAGRTRS-ATLVGCYL 133 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS-~~v~~ayL 133 (136)
..+++|+|+|..|. || +..++..|
T Consensus 69 ~~~~~ivvyC~~g~-r~~s~~a~~~L 93 (124)
T 3flh_A 69 DPAKTYVVYDWTGG-TTLGKTALLVL 93 (124)
T ss_dssp CTTSEEEEECSSSS-CSHHHHHHHHH
T ss_pred CCCCeEEEEeCCCC-chHHHHHHHHH
Confidence 45689999999995 64 34444433
No 103
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=85.12 E-value=1.8 Score=27.36 Aligned_cols=59 Identities=14% Similarity=0.124 Sum_probs=31.7
Q ss_pred CEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcC-CCCChHHHHH
Q psy7473 53 KGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCK-AGRTRSATLV 129 (136)
Q Consensus 53 ~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~-~G~~RS~~v~ 129 (136)
..|||+++..+. . ..+--.-+++|+.+.. . .+.++ +. ....+.+|+|+|. .| .||...+
T Consensus 44 ~~lIDvR~~~ey------~--~ghIpgAinip~~~l~-~----~~~~l---~~-~~~~~~~iVvyC~~~G-~rs~~aa 103 (152)
T 1t3k_A 44 IAIIDVRDEERN------Y--DGHIAGSLHYASGSFD-D----KISHL---VQ-NVKDKDTLVFHSALSQ-VRGPTCA 103 (152)
T ss_dssp EEEEEESCSHHH------H--SSCCCSSEEECCSSSS-T----THHHH---HH-TCCSCCEEEESSSCCS-SSHHHHH
T ss_pred EEEEECCChhhc------c--CccCCCCEECCHHHHH-H----HHHHH---HH-hcCCCCEEEEEcCCCC-cchHHHH
Confidence 379999987542 0 1111122567876653 2 12221 11 1245689999998 66 4764433
No 104
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=84.97 E-value=0.8 Score=28.46 Aligned_cols=19 Identities=32% Similarity=0.445 Sum_probs=15.1
Q ss_pred HcCCeEEEEcCCCCChHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v 128 (136)
..+++|+|+|..|. ||...
T Consensus 80 ~~~~~ivvyC~~G~-rS~~a 98 (137)
T 1qxn_A 80 DPEKPVVVFCKTAA-RAALA 98 (137)
T ss_dssp CTTSCEEEECCSSS-CHHHH
T ss_pred CCCCeEEEEcCCCc-HHHHH
Confidence 45789999999995 88553
No 105
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=84.61 E-value=0.72 Score=28.45 Aligned_cols=19 Identities=26% Similarity=0.371 Sum_probs=15.0
Q ss_pred HcCCeEEEEcCCCCChHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v 128 (136)
..+.+|+|+|..| .||..+
T Consensus 84 ~~~~~ivvyC~~G-~rs~~a 102 (139)
T 2hhg_A 84 QEDKKFVFYCAGG-LRSALA 102 (139)
T ss_dssp GSSSEEEEECSSS-HHHHHH
T ss_pred CCCCeEEEECCCC-hHHHHH
Confidence 5678999999999 487543
No 106
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=84.15 E-value=0.54 Score=27.77 Aligned_cols=19 Identities=11% Similarity=0.228 Sum_probs=14.3
Q ss_pred HHcCCeEEEEcCCCCChHHH
Q psy7473 108 SKTGGTVYVHCKAGRTRSAT 127 (136)
Q Consensus 108 ~~~~~~VlVHC~~G~~RS~~ 127 (136)
+..+.+|+|+|..| .||..
T Consensus 49 l~~~~~ivvyc~~g-~rs~~ 67 (106)
T 3hix_A 49 LEKSRDIYVYGAGD-EQTSQ 67 (106)
T ss_dssp SCTTSCEEEECSSH-HHHHH
T ss_pred CCCCCeEEEEECCC-ChHHH
Confidence 45668999999988 47644
No 107
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=83.72 E-value=6.1 Score=24.75 Aligned_cols=61 Identities=11% Similarity=0.126 Sum_probs=30.2
Q ss_pred CEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEc-CCCCChHHHHH
Q psy7473 53 KGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHC-KAGRTRSATLV 129 (136)
Q Consensus 53 ~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC-~~G~~RS~~v~ 129 (136)
-.|||++.+ +. ....-.| -+++|+.+.. . ..+.++.+.+.. .....|++|| ..| .||...+
T Consensus 25 ~~lIDvR~~-ey------~~gHIpG--Ainip~~~l~-~---~~~~~l~~~l~~--~~~~~vV~yC~~sg-~rs~~aa 86 (152)
T 2j6p_A 25 AAVIDCRDS-DR------DCGFIVN--SINMPTISCT-E---EMYEKLAKTLFE--EKKELAVFHCAQSL-VRAPKGA 86 (152)
T ss_dssp EEEEECCST-TG------GGCBCTT--CEECCTTTCC-H---HHHHHHHHHHHH--TTCCEEEEECSSSS-SHHHHHH
T ss_pred EEEEEcCcH-Hh------CcCcCCC--cEECChhHhh-H---HHHHHHHHHhcc--cCCCEEEEEcCCCC-CccHHHH
Confidence 379999987 53 1101112 2467776543 1 123332222221 2233688899 566 5875544
No 108
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=83.03 E-value=0.85 Score=27.07 Aligned_cols=55 Identities=24% Similarity=0.181 Sum_probs=31.0
Q ss_pred EEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHH
Q psy7473 54 GVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 54 ~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v 128 (136)
.|||++++.+. . ..+--.-+++|+.+.. +.+.+ .....+.+|+|+|..| .||...
T Consensus 18 ~liDvR~~~e~------~--~ghIpgAi~ip~~~l~-----~~~~~------~~~~~~~~ivvyC~~G-~rs~~a 72 (110)
T 2k0z_A 18 IVVDVRELDEY------E--ELHLPNATLISVNDQE-----KLADF------LSQHKDKKVLLHCRAG-RRALDA 72 (110)
T ss_dssp EEEEEECHHHH------H--HSBCTTEEEEETTCHH-----HHHHH------HHSCSSSCEEEECSSS-HHHHHH
T ss_pred EEEECCCHHHH------h--cCcCCCCEEcCHHHHH-----HHHHh------cccCCCCEEEEEeCCC-chHHHH
Confidence 78999976542 1 1111123577775421 11111 1235678999999998 477543
No 109
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=82.77 E-value=0.9 Score=26.90 Aligned_cols=23 Identities=30% Similarity=0.384 Sum_probs=16.0
Q ss_pred HcCCeEEEEcCCCCChHHHHHHHHh
Q psy7473 109 KTGGTVYVHCKAGRTRSATLVGCYL 133 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~~ayL 133 (136)
..+.+|+++|..| .||. .++..|
T Consensus 53 ~~~~~ivvyC~~G-~rs~-~aa~~L 75 (108)
T 3gk5_A 53 ERDKKYAVICAHG-NRSA-AAVEFL 75 (108)
T ss_dssp CTTSCEEEECSSS-HHHH-HHHHHH
T ss_pred CCCCeEEEEcCCC-cHHH-HHHHHH
Confidence 4568999999988 5775 344433
No 110
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=81.83 E-value=1.5 Score=30.64 Aligned_cols=23 Identities=22% Similarity=0.491 Sum_probs=16.4
Q ss_pred HcCCeEEEEcCCCCChHHHHHHHHh
Q psy7473 109 KTGGTVYVHCKAGRTRSATLVGCYL 133 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~~ayL 133 (136)
..+++|+++|..|. ||. .++.+|
T Consensus 179 ~kdk~IVvyC~~G~-RS~-~Aa~~L 201 (265)
T 4f67_A 179 KKDKKIAMFCTGGI-RCE-KTTAYM 201 (265)
T ss_dssp GTTSCEEEECSSSH-HHH-HHHHHH
T ss_pred CCCCeEEEEeCCCh-HHH-HHHHHH
Confidence 56789999999884 774 444444
No 111
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=81.46 E-value=1.4 Score=31.22 Aligned_cols=21 Identities=10% Similarity=0.275 Sum_probs=15.5
Q ss_pred HHcCCeEEEEcCCCCChHHHHH
Q psy7473 108 SKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 108 ~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
...+++|+++|..|. ||...+
T Consensus 251 ~~~~~~iv~yC~sG~-rs~~a~ 271 (302)
T 3olh_A 251 VDLSKPLVATCGSGV-TACHVA 271 (302)
T ss_dssp CCTTSCEEEECSSSS-TTHHHH
T ss_pred CCCCCCEEEECCChH-HHHHHH
Confidence 345689999999995 775443
No 112
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=81.29 E-value=1.5 Score=30.71 Aligned_cols=21 Identities=10% Similarity=0.256 Sum_probs=15.6
Q ss_pred HcCCeEEEEcCCCCChHHHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATLVG 130 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~~ 130 (136)
..+++|+|+|..|. ||...+.
T Consensus 238 ~~~~~ivv~C~sG~-rs~~a~~ 258 (296)
T 1rhs_A 238 DLTKPLIATCRKGV-TACHIAL 258 (296)
T ss_dssp CTTSCEEEECSSSS-THHHHHH
T ss_pred CCCCCEEEECCcHH-HHHHHHH
Confidence 45789999999994 7755443
No 113
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=81.01 E-value=2.3 Score=28.15 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHH
Q psy7473 95 DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVG 130 (136)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ 130 (136)
+.++++++.|.++++++++|++. |.|.|+.++-
T Consensus 30 ~~i~~a~~~i~~al~~~~~I~i~---G~G~S~~~A~ 62 (201)
T 3trj_A 30 PAIAQAAKAMVSCLENGGKVLVC---GNGSSGVIAQ 62 (201)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEE---ESTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEE---eCcHhHHHHH
Confidence 47899999999988889999884 5567766553
No 114
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=79.93 E-value=1.1 Score=25.60 Aligned_cols=16 Identities=19% Similarity=0.335 Sum_probs=12.8
Q ss_pred CeEEEEcCCCCChHHHH
Q psy7473 112 GTVYVHCKAGRTRSATL 128 (136)
Q Consensus 112 ~~VlVHC~~G~~RS~~v 128 (136)
++|+|+|..|. ||...
T Consensus 54 ~~ivvyC~~g~-rs~~a 69 (94)
T 1wv9_A 54 RPLLLVCEKGL-LSQVA 69 (94)
T ss_dssp SCEEEECSSSH-HHHHH
T ss_pred CCEEEEcCCCC-hHHHH
Confidence 79999999994 87543
No 115
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=79.36 E-value=6.8 Score=26.19 Aligned_cols=18 Identities=11% Similarity=-0.027 Sum_probs=13.9
Q ss_pred CCeEEEEcCCCCChHHHH
Q psy7473 111 GGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 111 ~~~VlVHC~~G~~RS~~v 128 (136)
+.+|+|+|..|..||..+
T Consensus 61 ~~~ivvyc~~g~~~s~~a 78 (230)
T 2eg4_A 61 RSPVVLYDEGLTSRLCRT 78 (230)
T ss_dssp CSSEEEECSSSCHHHHHH
T ss_pred CCEEEEEcCCCCccHHHH
Confidence 679999999996566544
No 116
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=79.32 E-value=1.4 Score=30.43 Aligned_cols=20 Identities=20% Similarity=0.380 Sum_probs=15.3
Q ss_pred HcCCeEEEEcCCCCChHHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~ 129 (136)
..+++|+|+|..| .||..++
T Consensus 221 ~~~~~ivvyC~~G-~rs~~a~ 240 (271)
T 1e0c_A 221 TPDKEIVTHCQTH-HRSGLTY 240 (271)
T ss_dssp CTTSEEEEECSSS-SHHHHHH
T ss_pred CCCCCEEEECCch-HHHHHHH
Confidence 5678999999999 4875443
No 117
>1xmx_A Hypothetical protein VC1899; alpha-beta, MCSG, protein structure initiative, structural G PSI, midwest center for structural genomics; 2.10A {Vibrio cholerae} SCOP: c.52.1.26
Probab=77.44 E-value=19 Score=26.45 Aligned_cols=96 Identities=13% Similarity=0.139 Sum_probs=56.0
Q ss_pred EEeCCCCcccHHHH-HhcCCCEEEEcccCccc-ccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcC
Q psy7473 34 ILGALPFKRLTNKL-LEENVKGVVSMNEDYEL-YFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTG 111 (136)
Q Consensus 34 ~~g~~~~~~~~~~l-~~~gi~~Vi~l~~~~~~-~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~ 111 (136)
.+|..|.+.-...| .+...+.|+-++++... ......+.....|++...+.+.|.. +..+..+.+.+.+++....+
T Consensus 9 lv~~~p~pnil~~l~~~~kp~~vv~I~s~~~~~~~~~l~~~l~~~~i~~~~~~i~~~~--d~~~i~~~~~~l~~~~~~~~ 86 (385)
T 1xmx_A 9 IIDQDPVRLVTPLLDHRTVSRHIIFIGDHTQTVIYQRLSDVLNKRNISTDFFEIPAGS--NTSAIKSAIRELAETLKARG 86 (385)
T ss_dssp ECCSSCHHHHHHHHSTTCCCCEEEEEECGGGHHHHHHHHHHHHHTTCEEEEEECCSSS--CHHHHHHHHHHHHHHHHHHT
T ss_pred EECCCchhHHHHHhcccCCCCEEEEEECCcHHHHHHHHHHHHHHcCCCceEEecCCcc--CHHHHHHHHHHHHHHhhccC
Confidence 45555554444444 34788999998886542 1111233355678888888886632 23333334444444444556
Q ss_pred CeEEEEcCCCCChHHHHHHHHh
Q psy7473 112 GTVYVHCKAGRTRSATLVGCYL 133 (136)
Q Consensus 112 ~~VlVHC~~G~~RS~~v~~ayL 133 (136)
.+|.++=++| .+.- .+++|.
T Consensus 87 ~~v~~N~TGG-TK~M-slaay~ 106 (385)
T 1xmx_A 87 EEVKFNASCG-LRHR-LLSAYE 106 (385)
T ss_dssp CEEEEECSSS-CHHH-HHHHHH
T ss_pred CcEEEEeCCC-hHHH-HHHHHH
Confidence 8899998888 4664 455553
No 118
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=75.43 E-value=3.4 Score=28.41 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHH-HHcCCeEEEEcCCCCChHHHHH
Q psy7473 94 QDKLERGVDFIQRI-SKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 94 ~~~~~~~~~~i~~~-~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
.+.|.+. +.+. ...+.+|+|+|..|..||..++
T Consensus 66 ~~~~~~~---~~~~gi~~~~~vvvyc~~g~~~s~~a~ 99 (271)
T 1e0c_A 66 REQLESL---FGELGHRPEAVYVVYDDEGGGWAGRFI 99 (271)
T ss_dssp HHHHHHH---HHHHTCCTTCEEEEECSSSSHHHHHHH
T ss_pred HHHHHHH---HHHcCCCCCCeEEEEcCCCCccHHHHH
Confidence 3444443 3343 3567899999999965775443
No 119
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=74.78 E-value=2.3 Score=29.38 Aligned_cols=18 Identities=22% Similarity=0.473 Sum_probs=14.3
Q ss_pred HcCCeEEEEcCCCCChHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSAT 127 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~ 127 (136)
..+++|+++|..|. ||..
T Consensus 224 ~~~~~iv~yC~~G~-rs~~ 241 (277)
T 3aay_A 224 DNSKETIAYCRIGE-RSSH 241 (277)
T ss_dssp CTTSCEEEECSSHH-HHHH
T ss_pred CCCCCEEEEcCcHH-HHHH
Confidence 56789999999985 7754
No 120
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=74.65 E-value=1 Score=28.10 Aligned_cols=24 Identities=13% Similarity=0.167 Sum_probs=16.6
Q ss_pred HHcCCeEEEEcCCCCChHHHHHHHHh
Q psy7473 108 SKTGGTVYVHCKAGRTRSATLVGCYL 133 (136)
Q Consensus 108 ~~~~~~VlVHC~~G~~RS~~v~~ayL 133 (136)
+..+.+|+|+|..| .||.. ++..|
T Consensus 53 l~~~~~ivvyC~~g-~rs~~-aa~~L 76 (141)
T 3ilm_A 53 LEKSRDIYVYGAGD-EQTSQ-AVNLL 76 (141)
T ss_dssp SCTTSEEEEECSSH-HHHHH-HHHHH
T ss_pred CCCCCeEEEEECCC-hHHHH-HHHHH
Confidence 45668999999988 57754 33333
No 121
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=73.89 E-value=4.2 Score=31.26 Aligned_cols=19 Identities=21% Similarity=0.555 Sum_probs=14.6
Q ss_pred HcCCeEEEEcCCCCChHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v 128 (136)
..+++|+++|..| .||...
T Consensus 539 ~~~~~iv~~C~~g-~rs~~a 557 (588)
T 3ics_A 539 PVDKDIYITCQLG-MRGYVA 557 (588)
T ss_dssp CSSSCEEEECSSS-HHHHHH
T ss_pred CCCCeEEEECCCC-cHHHHH
Confidence 4568999999988 587543
No 122
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=73.24 E-value=11 Score=27.20 Aligned_cols=80 Identities=9% Similarity=0.027 Sum_probs=42.0
Q ss_pred HHhcCCCEEEEcccCccc---ccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCC--C
Q psy7473 47 LLEENVKGVVSMNEDYEL---YFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKA--G 121 (136)
Q Consensus 47 l~~~gi~~Vi~l~~~~~~---~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~--G 121 (136)
.++.|+..+.++...... .+....+.....|...+ .+.|......+..+.+.++.+++...++-++-+||+. |
T Consensus 129 ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i--~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G 206 (345)
T 1nvm_A 129 ARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCI--YMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLS 206 (345)
T ss_dssp HHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEE--EEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTS
T ss_pred HHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEE--EECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCcc
Confidence 455677766666322110 01111122233455544 3445444445677777777777665335799999975 5
Q ss_pred CChHHHH
Q psy7473 122 RTRSATL 128 (136)
Q Consensus 122 ~~RS~~v 128 (136)
.+=+-++
T Consensus 207 ~avAn~l 213 (345)
T 1nvm_A 207 LGVANSI 213 (345)
T ss_dssp CHHHHHH
T ss_pred HHHHHHH
Confidence 4444333
No 123
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=73.08 E-value=3.8 Score=25.55 Aligned_cols=21 Identities=5% Similarity=0.082 Sum_probs=15.6
Q ss_pred HcCCeEEEEcCCCC-ChHHHHH
Q psy7473 109 KTGGTVYVHCKAGR-TRSATLV 129 (136)
Q Consensus 109 ~~~~~VlVHC~~G~-~RS~~v~ 129 (136)
..+.+|+|+|..|. .||..++
T Consensus 70 ~~~~~ivvyC~~g~~~rs~~aa 91 (144)
T 3nhv_A 70 SKEKVIITYCWGPACNGATKAA 91 (144)
T ss_dssp CTTSEEEEECSCTTCCHHHHHH
T ss_pred CCCCeEEEEECCCCccHHHHHH
Confidence 45689999999996 5775443
No 124
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=73.07 E-value=1.6 Score=30.37 Aligned_cols=18 Identities=22% Similarity=0.453 Sum_probs=14.1
Q ss_pred HcCCeEEEEcCCCCChHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSAT 127 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~ 127 (136)
..+++|+|+|..|. ||..
T Consensus 231 ~~~~~ivvyC~~G~-rs~~ 248 (285)
T 1uar_A 231 TKDKDIVVYCRIAE-RSSH 248 (285)
T ss_dssp CTTSEEEEECSSHH-HHHH
T ss_pred CCCCCEEEECCchH-HHHH
Confidence 45689999999985 7754
No 125
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=72.25 E-value=2.6 Score=28.35 Aligned_cols=20 Identities=40% Similarity=0.586 Sum_probs=15.0
Q ss_pred HcCCeEEEEcCCCCChHHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~ 129 (136)
..+++|+++|..|. ||...+
T Consensus 182 ~~~~~iv~~C~~G~-rs~~a~ 201 (230)
T 2eg4_A 182 QPGQEVGVYCHSGA-RSAVAF 201 (230)
T ss_dssp CTTCEEEEECSSSH-HHHHHH
T ss_pred CCCCCEEEEcCChH-HHHHHH
Confidence 56789999999985 765443
No 126
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=71.18 E-value=4.1 Score=28.17 Aligned_cols=22 Identities=14% Similarity=-0.105 Sum_probs=15.2
Q ss_pred HcCCeEEEEcCCCCChHHHHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATLVGC 131 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~~a 131 (136)
..+.+|+|+|..|. |++..++.
T Consensus 84 ~~~~~ivvyc~~g~-~~a~~a~~ 105 (280)
T 1urh_A 84 NQDKHLIVYDEGNL-FSAPRAWW 105 (280)
T ss_dssp CTTSEEEEECSSSC-SSHHHHHH
T ss_pred CCCCeEEEECCCCC-ccHHHHHH
Confidence 55789999999984 63344443
No 127
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=70.74 E-value=13 Score=26.80 Aligned_cols=38 Identities=13% Similarity=0.023 Sum_probs=27.2
Q ss_pred EeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCC
Q psy7473 82 QLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAG 121 (136)
Q Consensus 82 ~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G 121 (136)
-+.+++. .+...+.+.+...++-+.+.|.||.|||..|
T Consensus 159 Eigld~~--~~~~~q~~~f~aq~~lA~~~glPViiH~~~g 196 (339)
T 3gtx_A 159 KLASSRD--AITPYEQLFFRAAARVQRETGVPIITHTQEG 196 (339)
T ss_dssp EEECCSS--CCCHHHHHHHHHHHHHHHHHCCCEEEECSTT
T ss_pred EEEcCCC--CCCHHHHHHHHHHHHHHHHHCCeEEEeCCCC
Confidence 4444543 4556667777777777788899999999665
No 128
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=67.81 E-value=27 Score=25.46 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=14.3
Q ss_pred HHHHhcCCCEEEEcccCc
Q psy7473 45 NKLLEENVKGVVSMNEDY 62 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~ 62 (136)
..+++.|+++||+++...
T Consensus 90 ~~~k~~Gg~tIVd~T~~g 107 (360)
T 3tn4_A 90 EKMKRHGIQTVVDPTPND 107 (360)
T ss_dssp HHHHHTTCCEEEECCCTT
T ss_pred HHHHhcCCCeEEECCCCC
Confidence 347789999999988654
No 129
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=67.79 E-value=6.6 Score=29.86 Aligned_cols=57 Identities=11% Similarity=0.165 Sum_probs=32.1
Q ss_pred CEEEEcccCcccccccChhhhhhcCC-eEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHHH
Q psy7473 53 KGVVSMNEDYELYFANGREEWNKVGV-EFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGC 131 (136)
Q Consensus 53 ~~Vi~l~~~~~~~~~~~~~~~~~~~i-~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~a 131 (136)
-.+||++++.|. ...++ .-+++|+.+.. ....+ +..+++|+++|..| .||.. ++.
T Consensus 487 ~~~iDvR~~~e~---------~~~~i~ga~~ip~~~l~-~~~~~------------~~~~~~iv~~c~~g-~rs~~-a~~ 542 (565)
T 3ntd_A 487 QLLLDVRNPGEL---------QNGGLEGAVNIPVDELR-DRMHE------------LPKDKEIIIFSQVG-LRGNV-AYR 542 (565)
T ss_dssp EEEEECSCGGGG---------GGCCCTTCEECCGGGTT-TSGGG------------SCTTSEEEEECSSS-HHHHH-HHH
T ss_pred cEEEEeCCHHHH---------hcCCCCCcEECCHHHHH-HHHhh------------cCCcCeEEEEeCCc-hHHHH-HHH
Confidence 368899887552 12112 22467775543 11111 24568999999988 57744 444
Q ss_pred Hh
Q psy7473 132 YL 133 (136)
Q Consensus 132 yL 133 (136)
+|
T Consensus 543 ~l 544 (565)
T 3ntd_A 543 QL 544 (565)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 130
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=67.69 E-value=2.5 Score=30.07 Aligned_cols=23 Identities=22% Similarity=0.268 Sum_probs=16.4
Q ss_pred HHcCCeEEEEcCCCCChHHHHHHH
Q psy7473 108 SKTGGTVYVHCKAGRTRSATLVGC 131 (136)
Q Consensus 108 ~~~~~~VlVHC~~G~~RS~~v~~a 131 (136)
+..+++|+++|..|. ||...+.+
T Consensus 256 l~~~~~ivvyC~sG~-rs~~a~~~ 278 (318)
T 3hzu_A 256 INPDDQTVVYCRIGE-RSSHTWFV 278 (318)
T ss_dssp CCTTCCCEEECSSSH-HHHHHHHH
T ss_pred CCCCCcEEEEcCChH-HHHHHHHH
Confidence 345789999999884 77654433
No 131
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=66.18 E-value=6.8 Score=26.94 Aligned_cols=18 Identities=17% Similarity=-0.029 Sum_probs=13.1
Q ss_pred HcCCeEEEEcCCCCChHH
Q psy7473 109 KTGGTVYVHCKAGRTRSA 126 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~ 126 (136)
..+.+|+|+|..|..||.
T Consensus 75 ~~~~~vvvyc~~g~~~s~ 92 (277)
T 3aay_A 75 ANEDTVILYGGNNNWFAA 92 (277)
T ss_dssp CTTSEEEEECSGGGHHHH
T ss_pred CCCCeEEEECCCCCchHH
Confidence 556899999998843443
No 132
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=65.35 E-value=17 Score=25.09 Aligned_cols=31 Identities=13% Similarity=0.131 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCCCChHH
Q psy7473 96 KLERGVDFIQRISKTGGTVYVHCKAGRTRSA 126 (136)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~ 126 (136)
+.+-+...++-+.+.+.||.|||..+..|.+
T Consensus 108 Q~~~f~~ql~lA~e~~lPv~iH~r~~~~~~a 138 (261)
T 3guw_A 108 EIEVLKSQLELAKRMDVPCIIHTPRGNKLKA 138 (261)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCSSSTTHH
T ss_pred HHHHHHHHHHHHHHhCCeEEEEcCCCcccch
Confidence 3344445566666778999999987655654
No 133
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=65.03 E-value=4.5 Score=29.59 Aligned_cols=18 Identities=11% Similarity=0.250 Sum_probs=14.2
Q ss_pred CCeEEEEcCCCCChHHHHH
Q psy7473 111 GGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 111 ~~~VlVHC~~G~~RS~~v~ 129 (136)
+++|+++|..|. ||...+
T Consensus 246 d~~ivvyC~sG~-rs~~a~ 263 (373)
T 1okg_A 246 LSSFVFSCGSGV-TACINI 263 (373)
T ss_dssp CTTSEEECSSSS-THHHHH
T ss_pred CCCEEEECCchH-HHHHHH
Confidence 689999999995 775544
No 134
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=64.16 E-value=6.3 Score=29.12 Aligned_cols=21 Identities=24% Similarity=0.303 Sum_probs=15.6
Q ss_pred HcCCeEEEEcCCCCChHHHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATLVG 130 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v~~ 130 (136)
..+++|+++|..|. ||...+.
T Consensus 356 ~~~~~ivvyC~sG~-rs~~aa~ 376 (423)
T 2wlr_A 356 KPEQQVSFYCGTGW-RASETFM 376 (423)
T ss_dssp CTTSEEEEECSSSH-HHHHHHH
T ss_pred CCCCcEEEECCcHH-HHHHHHH
Confidence 45689999999994 7755443
No 135
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=62.39 E-value=2.8 Score=30.20 Aligned_cols=14 Identities=14% Similarity=0.351 Sum_probs=11.5
Q ss_pred HcCCeEEEEcCCCC
Q psy7473 109 KTGGTVYVHCKAGR 122 (136)
Q Consensus 109 ~~~~~VlVHC~~G~ 122 (136)
..+++|.++|..|+
T Consensus 273 d~~k~vI~yCgsGv 286 (327)
T 3utn_X 273 DPSKPTICSCGTGV 286 (327)
T ss_dssp CTTSCEEEECSSSH
T ss_pred CCCCCEEEECChHH
Confidence 45679999998886
No 136
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=61.62 E-value=6 Score=26.66 Aligned_cols=17 Identities=18% Similarity=0.561 Sum_probs=11.2
Q ss_pred eEEEEcC-CCCChHHHHHH
Q psy7473 113 TVYVHCK-AGRTRSATLVG 130 (136)
Q Consensus 113 ~VlVHC~-~G~~RS~~v~~ 130 (136)
+|++||. .| .||+..+.
T Consensus 126 ~VVvyC~~SG-~Rs~~aa~ 143 (216)
T 3op3_A 126 IIVFHCEFSS-ERGPRMCR 143 (216)
T ss_dssp EEEEECCC---CCHHHHHH
T ss_pred EEEEEeCCCC-hHHHHHHH
Confidence 4999999 77 58866553
No 137
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=60.32 E-value=5.9 Score=28.16 Aligned_cols=20 Identities=15% Similarity=-0.017 Sum_probs=15.1
Q ss_pred HHcCCeEEEEcCCCCChHHH
Q psy7473 108 SKTGGTVYVHCKAGRTRSAT 127 (136)
Q Consensus 108 ~~~~~~VlVHC~~G~~RS~~ 127 (136)
...+.+|+|+|..|..||..
T Consensus 108 i~~~~~vVvyc~~g~~~a~~ 127 (318)
T 3hzu_A 108 IARDDTVVIYGDKSNWWAAY 127 (318)
T ss_dssp CCTTCEEEEECSGGGHHHHH
T ss_pred CCCCCeEEEECCCCCccHHH
Confidence 35678999999998656643
No 138
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=60.19 E-value=24 Score=21.48 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHH
Q psy7473 95 DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v 128 (136)
+.+.++.+.++.+...+.+|+++-..|.|.|-..
T Consensus 8 ~~~~~~~~~~~~~a~~~~~vll~G~~GtGKt~lA 41 (145)
T 3n70_A 8 EWINQYRRRLQQLSETDIAVWLYGAPGTGRMTGA 41 (145)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEESSTTSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCCCCCHHHHH
Confidence 5667777778777778899999999999998443
No 139
>1w2w_A 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=59.55 E-value=7.9 Score=26.16 Aligned_cols=12 Identities=25% Similarity=0.426 Sum_probs=9.8
Q ss_pred cCCeEEEEcCCC
Q psy7473 110 TGGTVYVHCKAG 121 (136)
Q Consensus 110 ~~~~VlVHC~~G 121 (136)
.|..||-||.+|
T Consensus 173 dg~~ILTHCNtG 184 (211)
T 1w2w_A 173 DEFAVLTICNTG 184 (211)
T ss_dssp SEEEEEECSCCS
T ss_pred CCCeEEeECCCc
Confidence 456899999996
No 140
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=59.28 E-value=8.8 Score=27.59 Aligned_cols=39 Identities=13% Similarity=0.015 Sum_probs=26.8
Q ss_pred EeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCC
Q psy7473 82 QLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGR 122 (136)
Q Consensus 82 ~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~ 122 (136)
-+.+++. .+...+.+.+...++-+.+.|.||.|||..|.
T Consensus 154 EiGld~~--~~~~~q~~~f~aq~~~A~~~glPViiH~r~g~ 192 (330)
T 3pnz_A 154 KFGTGYN--MITPLEEKTIRAVARAHHETKAPIHSHTEAGT 192 (330)
T ss_dssp EEECBTT--BCCHHHHHHHHHHHHHHHHHCCCEEEECGGGC
T ss_pred EEEcCCC--CCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCc
Confidence 4554432 34556666666777777788999999998753
No 141
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=58.86 E-value=15 Score=24.69 Aligned_cols=33 Identities=21% Similarity=0.495 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHH
Q psy7473 94 QDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
.+.++++++.|.+.+.++++|++. |.|.|+.++
T Consensus 25 ~~~i~~a~~~l~~~i~~~~~I~i~---G~G~S~~~A 57 (243)
T 3cvj_A 25 EQAIIKGAHLVSEAVMNGGRFYVF---GSGHSHMIA 57 (243)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEE---ESGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEE---cCcHHHHHH
Confidence 367888888888888888888874 666776644
No 142
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=55.20 E-value=16 Score=22.87 Aligned_cols=12 Identities=8% Similarity=-0.238 Sum_probs=9.4
Q ss_pred CeEEEEcCCCCC
Q psy7473 112 GTVYVHCKAGRT 123 (136)
Q Consensus 112 ~~VlVHC~~G~~ 123 (136)
..|+|||..|-.
T Consensus 88 ~~VVvy~~~~~~ 99 (157)
T 1whb_A 88 EYVVLLDWFSSA 99 (157)
T ss_dssp SEEEEECSSCCG
T ss_pred CEEEEECCCCCc
Confidence 459999998854
No 143
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=55.09 E-value=21 Score=22.36 Aligned_cols=12 Identities=8% Similarity=-0.238 Sum_probs=9.3
Q ss_pred CeEEEEcCCCCC
Q psy7473 112 GTVYVHCKAGRT 123 (136)
Q Consensus 112 ~~VlVHC~~G~~ 123 (136)
..|+|+|..|-+
T Consensus 93 ~~VVvy~~~~~~ 104 (157)
T 2gwf_A 93 EYVVLLDWFSSA 104 (157)
T ss_dssp SEEEEECSSCCG
T ss_pred CEEEEEcCCCCc
Confidence 359999998854
No 144
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=54.28 E-value=12 Score=23.36 Aligned_cols=12 Identities=8% Similarity=-0.006 Sum_probs=10.7
Q ss_pred CCeEEEEcCCCC
Q psy7473 111 GGTVYVHCKAGR 122 (136)
Q Consensus 111 ~~~VlVHC~~G~ 122 (136)
+++|+|+|..|.
T Consensus 93 ~~~IVvyc~~g~ 104 (158)
T 3tg1_B 93 SKEIIVYDENTN 104 (158)
T ss_dssp TSCEEEECSCCS
T ss_pred CCeEEEEECCCC
Confidence 579999999996
No 145
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=54.11 E-value=43 Score=26.34 Aligned_cols=35 Identities=23% Similarity=0.389 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHH
Q psy7473 94 QDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
.+..+++.+.|.+..+.+++|+|+|.+ +||+--++
T Consensus 406 ~~~~~~l~~~i~~~l~~~g~vlIp~fa-vgR~qell 440 (651)
T 3af5_A 406 EEAEKRLIEVIHNTIKRGGKVLIPAMA-VGRAQEVM 440 (651)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCT-TTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeccC-ccHHHHHH
Confidence 444567778888888889999999998 88985544
No 146
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=53.51 E-value=7.7 Score=29.04 Aligned_cols=19 Identities=42% Similarity=0.691 Sum_probs=14.7
Q ss_pred HcCCeEEEEcCCCCChHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v 128 (136)
..+++|+|+|..|. ||...
T Consensus 425 ~~~~~vvv~C~~G~-ra~~a 443 (474)
T 3tp9_A 425 PRDGSVCVYCRTGG-RSAIA 443 (474)
T ss_dssp CSSSCEEEECSSSH-HHHHH
T ss_pred CCCCEEEEECCCCH-HHHHH
Confidence 45689999999996 76543
No 147
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=51.80 E-value=34 Score=21.84 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHH
Q psy7473 94 QDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
.+.++++++.|.+...++++|++. |.|.|+.++
T Consensus 31 ~~~i~~~~~~i~~~i~~~~~I~i~---G~G~S~~~A 63 (198)
T 2xbl_A 31 LATVRKVADACIASIAQGGKVLLA---GNGGSAADA 63 (198)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEE---CSTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEE---eCcHhhHHH
Confidence 356777777777766777888773 666676654
No 148
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=51.70 E-value=8.6 Score=21.06 Aligned_cols=14 Identities=29% Similarity=0.762 Sum_probs=11.6
Q ss_pred HcCCeEEEEcCCCC
Q psy7473 109 KTGGTVYVHCKAGR 122 (136)
Q Consensus 109 ~~~~~VlVHC~~G~ 122 (136)
..|.-||+||..|.
T Consensus 17 ~~geDVL~rw~DG~ 30 (69)
T 2xk0_A 17 ALQEDVFIKCNDGR 30 (69)
T ss_dssp CTTCEEEEECTTSC
T ss_pred ccCCeEEEEecCCC
Confidence 45789999999884
No 149
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=51.47 E-value=21 Score=23.95 Aligned_cols=28 Identities=7% Similarity=-0.071 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 93 DQDKLERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
...+.+.+...++.+.+.|.||.|||..
T Consensus 109 ~~~q~~~f~~~~~~a~~~~~Pv~iH~~~ 136 (259)
T 1zzm_A 109 FERQQWLLDEQLKLAKRYDLPVILHSRR 136 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEecc
Confidence 3444555566666677778999999964
No 150
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=51.32 E-value=14 Score=28.34 Aligned_cols=19 Identities=11% Similarity=0.086 Sum_probs=14.9
Q ss_pred HcCCeEEEEcCCCCChHHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~v 128 (136)
..+++|+++|..|. ||...
T Consensus 428 ~~~~~ivv~C~sG~-rs~~a 446 (539)
T 1yt8_A 428 GTAERYVLTCGSSL-LARFA 446 (539)
T ss_dssp CCCSEEEEECSSSH-HHHHH
T ss_pred CCCCeEEEEeCCCh-HHHHH
Confidence 56789999999985 77543
No 151
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=51.14 E-value=25 Score=21.34 Aligned_cols=33 Identities=12% Similarity=0.173 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHH
Q psy7473 95 DKLERGVDFIQRISKTGGTVYVHCKAGRTRSAT 127 (136)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~ 127 (136)
+.+.++.+.+......+.+|+++-..|.|.|-.
T Consensus 11 ~~~~~l~~~~~~~~~~~~~vll~G~~GtGKt~l 43 (143)
T 3co5_A 11 AAIQEMNREVEAAAKRTSPVFLTGEAGSPFETV 43 (143)
T ss_dssp HHHHHHHHHHHHHHTCSSCEEEEEETTCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcEEEECCCCccHHHH
Confidence 456777777777777788999999999999843
No 152
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=50.65 E-value=16 Score=25.36 Aligned_cols=22 Identities=23% Similarity=0.001 Sum_probs=14.9
Q ss_pred HcCCeEEEEcCC--CCChHHHHHHH
Q psy7473 109 KTGGTVYVHCKA--GRTRSATLVGC 131 (136)
Q Consensus 109 ~~~~~VlVHC~~--G~~RS~~v~~a 131 (136)
..+.+|+|+|.. | +|++.-++.
T Consensus 90 ~~~~~vVvyc~~~~g-~~~a~~a~~ 113 (296)
T 1rhs_A 90 SNDTHVVVYDGDDLG-SFYAPRVWW 113 (296)
T ss_dssp CTTCEEEEECCCSSS-CSSHHHHHH
T ss_pred CCCCeEEEEcCCCCC-cchHHHHHH
Confidence 456899999998 6 464444433
No 153
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=49.83 E-value=26 Score=24.14 Aligned_cols=28 Identities=14% Similarity=0.398 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHcCCeEE-EEcCCC
Q psy7473 94 QDKLERGVDFIQRISKTGGTVY-VHCKAG 121 (136)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~Vl-VHC~~G 121 (136)
..+.+-+...++-+.+.+.||+ |||...
T Consensus 100 ~~Q~~~F~~ql~lA~e~~lPviSiH~r~a 128 (254)
T 3gg7_A 100 TQQFAVFQHILRRCEDHGGRILSIHSRRA 128 (254)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 3455555566666677788898 999754
No 154
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=49.68 E-value=20 Score=24.36 Aligned_cols=25 Identities=20% Similarity=0.154 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 96 KLERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
+.+.+...++.+.+.+.||.|||..
T Consensus 124 q~~~f~~~~~la~~~~lPv~iH~~~ 148 (272)
T 2y1h_A 124 QRQVLIRQIQLAKRLNLPVNVHSRS 148 (272)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred HHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 3334445555556667889999864
No 155
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=49.60 E-value=29 Score=21.99 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHH
Q psy7473 95 DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
+.++++++.+.+.+.++++|++. |.|.|+.++
T Consensus 26 ~~i~~~~~~i~~~l~~~~~I~i~---G~G~S~~~a 57 (188)
T 1tk9_A 26 GQIAKVGELLCECLKKGGKILIC---GNGGSAADA 57 (188)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEE---ESTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEE---eCcHhHHHH
Confidence 67888888887777778888874 666666543
No 156
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=49.17 E-value=5.8 Score=24.64 Aligned_cols=17 Identities=18% Similarity=0.108 Sum_probs=13.1
Q ss_pred HcCCeEEEEcCCCCChHH
Q psy7473 109 KTGGTVYVHCKAGRTRSA 126 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~ 126 (136)
..+.+|+|+|..|. ||.
T Consensus 76 ~~~~~iVvyc~~g~-~s~ 92 (153)
T 2vsw_A 76 DCSQKVVVYDQSSQ-DVA 92 (153)
T ss_dssp CTTSEEEEECSSCC-CGG
T ss_pred CCCCeEEEEeCCCC-ccc
Confidence 45689999999984 664
No 157
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=47.67 E-value=40 Score=21.62 Aligned_cols=32 Identities=16% Similarity=0.092 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHH
Q psy7473 95 DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
+.++++++.+.+.+.++++|++- |.|.|+.++
T Consensus 29 ~~i~~~~~~i~~~i~~a~~I~i~---G~G~S~~~A 60 (199)
T 1x92_A 29 PYIEQASLVMVNALLNEGKILSC---GNGGSAGDA 60 (199)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEE---CSTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEE---cCchhHHHH
Confidence 45677777777777777888873 666666544
No 158
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=47.12 E-value=19 Score=25.19 Aligned_cols=28 Identities=7% Similarity=-0.022 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCCC
Q psy7473 94 QDKLERGVDFIQRISKTGGTVYVHCKAG 121 (136)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~VlVHC~~G 121 (136)
..+.+-+.+.++-+.+.+.||.|||...
T Consensus 110 ~~Q~~~F~~ql~lA~e~~lPv~iH~r~a 137 (287)
T 3rcm_A 110 PLQEKALEAQLTLAAQLRLPVFLHERDA 137 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEcCCc
Confidence 3445555556666666677888888654
No 159
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=47.08 E-value=50 Score=22.99 Aligned_cols=70 Identities=11% Similarity=0.093 Sum_probs=38.9
Q ss_pred CCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCC-----CCchHHHHHHHHHHHHHHHHc---CCeEEEEcCCCC
Q psy7473 51 NVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIF-----DTPDQDKLERGVDFIQRISKT---GGTVYVHCKAGR 122 (136)
Q Consensus 51 gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~-----~~~~~~~~~~~~~~i~~~~~~---~~~VlVHC~~G~ 122 (136)
.|.-|.|=+.+-+ .+..+..++.++.+++..++ ..|+...|.+. .++..++ .+-+.||-++|.
T Consensus 5 ki~IvtDSt~dL~------~e~~~~~~I~vvPL~v~~~~~~p~TSqps~~~~~~~---f~~~~~~~~~d~Ii~I~iSs~L 75 (277)
T 3egl_A 5 PVRVIVDSSACLP------THVAEDLDITVINLHVMNNGEERSTSGLSSLELAAS---YARQLERGGDDGVLALHISXEL 75 (277)
T ss_dssp CCEEEEEGGGCCC------HHHHHHTTEEEECCEEEECSSCEEEECCCHHHHHHH---HHHHHHHTTTSCEEEECSCTTT
T ss_pred cEEEEEECCCCCC------HHHHHHCCeEEEEEEEEECCcccccCCcCHHHHHHH---HHHHHHhCCCCcEEEEEeCcch
Confidence 4555555444433 44556778888777754332 23445555544 4444433 246888888887
Q ss_pred ChHHHHHHH
Q psy7473 123 TRSATLVGC 131 (136)
Q Consensus 123 ~RS~~v~~a 131 (136)
| |+.-.|
T Consensus 76 S--GTy~sA 82 (277)
T 3egl_A 76 S--STWSAA 82 (277)
T ss_dssp C--SHHHHH
T ss_pred h--hhhHHH
Confidence 6 444443
No 160
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=46.97 E-value=18 Score=26.39 Aligned_cols=31 Identities=23% Similarity=0.168 Sum_probs=23.3
Q ss_pred CchHHHHHHHHHHHHHHHHcCCeEEEEcCCC
Q psy7473 91 TPDQDKLERGVDFIQRISKTGGTVYVHCKAG 121 (136)
Q Consensus 91 ~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G 121 (136)
.+...+.+.+...++-+.+.|.||.|||..|
T Consensus 162 ~~t~~Q~~~f~aq~~~A~e~glPViiH~r~g 192 (363)
T 3ovg_A 162 AIDRLELKALEVAARTSILTGCPILVHTQLG 192 (363)
T ss_dssp BEEHHHHHHHHHHHHHHHHHCCCEEEEEETT
T ss_pred CCCHHHHHHHHHHHHHHHHhCCEEEEeCCCC
Confidence 4455666667777777778899999999765
No 161
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=46.57 E-value=21 Score=26.39 Aligned_cols=12 Identities=17% Similarity=0.487 Sum_probs=10.4
Q ss_pred cCCeEEEEcCCC
Q psy7473 110 TGGTVYVHCKAG 121 (136)
Q Consensus 110 ~~~~VlVHC~~G 121 (136)
.|..||.||.+|
T Consensus 177 ~g~~ILThcnsg 188 (383)
T 2a0u_A 177 DKVSILTICNTG 188 (383)
T ss_dssp SSEEEEECSCCS
T ss_pred CCCEEEEecCCc
Confidence 677999999886
No 162
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=46.29 E-value=46 Score=24.17 Aligned_cols=25 Identities=16% Similarity=0.097 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEcC
Q psy7473 95 DKLERGVDFIQRISKTGGTVYVHCK 119 (136)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~VlVHC~ 119 (136)
.+.+.+...++-+.+.|.||.|||.
T Consensus 187 ~q~~~f~aq~~~A~~~glPV~iH~~ 211 (364)
T 3k2g_A 187 EEEKSLRGAARAQVRTGLPLMVHLP 211 (364)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHCCeEEEecC
Confidence 3444444555556677999999994
No 163
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=45.73 E-value=20 Score=23.80 Aligned_cols=22 Identities=14% Similarity=0.344 Sum_probs=16.5
Q ss_pred HHcCCeEEEEcCCCCChHHHHH
Q psy7473 108 SKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 108 ~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
..+.+.|+|||..|+|.|.+.+
T Consensus 25 ~~~~g~i~v~tG~GkGKTTaA~ 46 (196)
T 1g5t_A 25 QEERGIIIVFTGNGKGKTTAAF 46 (196)
T ss_dssp --CCCCEEEEESSSSCHHHHHH
T ss_pred cccCceEEEECCCCCCHHHHHH
Confidence 3456899999999999985443
No 164
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=45.66 E-value=21 Score=22.19 Aligned_cols=19 Identities=26% Similarity=0.629 Sum_probs=12.7
Q ss_pred cCCeE--EEEcC-CCCChHHHHH
Q psy7473 110 TGGTV--YVHCK-AGRTRSATLV 129 (136)
Q Consensus 110 ~~~~V--lVHC~-~G~~RS~~v~ 129 (136)
.++++ ++||. .| .||...+
T Consensus 86 ~~~~ivvv~yC~~sg-~rs~~aa 107 (161)
T 1c25_A 86 DGKRVIVVFHCEFSS-ERGPRMC 107 (161)
T ss_dssp TTSEEEEEEECSSSS-SHHHHHH
T ss_pred CCCCeEEEEEcCCCC-cchHHHH
Confidence 45675 57998 66 5886544
No 165
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=45.54 E-value=12 Score=27.29 Aligned_cols=13 Identities=38% Similarity=0.779 Sum_probs=11.0
Q ss_pred HcCCeEEEEcCCC
Q psy7473 109 KTGGTVYVHCKAG 121 (136)
Q Consensus 109 ~~~~~VlVHC~~G 121 (136)
..|..||.||.+|
T Consensus 145 ~~g~~ILThcnsg 157 (351)
T 1t5o_A 145 EDGDVVLTYCNAG 157 (351)
T ss_dssp CTTCEEEECSCCS
T ss_pred CCCCEEEEecCCc
Confidence 3678999999986
No 166
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=45.35 E-value=73 Score=22.21 Aligned_cols=77 Identities=10% Similarity=0.091 Sum_probs=46.1
Q ss_pred HHHHhcCCCEEEEcccCc--cc-------ccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEE
Q psy7473 45 NKLLEENVKGVVSMNEDY--EL-------YFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVY 115 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~--~~-------~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~Vl 115 (136)
+..++.|+...+++.... +. ......+.....|...+.++ |....-.+..+.+.++.+.+... +-++-
T Consensus 128 ~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~--DT~G~~~P~~~~~lv~~l~~~~~-~~~i~ 204 (298)
T 2cw6_A 128 KAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG--DTIGVGTPGIMKDMLSAVMQEVP-LAALA 204 (298)
T ss_dssp HHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE--ETTSCCCHHHHHHHHHHHHHHSC-GGGEE
T ss_pred HHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec--CCCCCcCHHHHHHHHHHHHHhCC-CCeEE
Confidence 446678998877765321 10 00001122345688776665 55546677888888888877652 35799
Q ss_pred EEcCCCCCh
Q psy7473 116 VHCKAGRTR 124 (136)
Q Consensus 116 VHC~~G~~R 124 (136)
+||+.-.|-
T Consensus 205 ~H~Hn~~Gl 213 (298)
T 2cw6_A 205 VHCHDTYGQ 213 (298)
T ss_dssp EEEBCTTSC
T ss_pred EEECCCCch
Confidence 999654443
No 167
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=44.87 E-value=85 Score=23.12 Aligned_cols=38 Identities=16% Similarity=0.334 Sum_probs=30.4
Q ss_pred chHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHHH
Q psy7473 92 PDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVG 130 (136)
Q Consensus 92 ~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ 130 (136)
+..+..+++.+.|++..+.|++|+|=|.+ +||+--++.
T Consensus 196 ~~~~~~~~l~~~i~~~~~~gg~vlIp~fa-~gR~qell~ 233 (431)
T 3iek_A 196 PYRETVREFLEILEKTLSQGGKVLIPTFA-VERAQEILY 233 (431)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECCT-TTHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHcCCeEEEEecc-chHHHHHHH
Confidence 44556778888898888999999999988 789865543
No 168
>1ryl_A Hypothetical protein YFBM; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Escherichia coli} SCOP: d.276.1.1
Probab=44.28 E-value=34 Score=21.98 Aligned_cols=25 Identities=12% Similarity=0.150 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHHHHHHcCCeEEEE
Q psy7473 93 DQDKLERGVDFIQRISKTGGTVYVH 117 (136)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~VlVH 117 (136)
....|++..+|..++.++|..|+|+
T Consensus 140 l~~~f~~L~~Fy~~aa~~~~~vl~~ 164 (167)
T 1ryl_A 140 IMLDMEKLISAYRRMLRQGNHALTV 164 (167)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCcEEEE
Confidence 4578999999999999999999986
No 169
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=43.82 E-value=14 Score=19.51 Aligned_cols=14 Identities=21% Similarity=0.223 Sum_probs=11.6
Q ss_pred HcCCeEEEEcCCCC
Q psy7473 109 KTGGTVYVHCKAGR 122 (136)
Q Consensus 109 ~~~~~VlVHC~~G~ 122 (136)
..|.-||+||+.|+
T Consensus 5 ~~GedVLarwsDG~ 18 (58)
T 4hcz_A 5 WEGQDVLARWTDGL 18 (58)
T ss_dssp CTTCEEEEECTTSC
T ss_pred ccCCEEEEEecCCC
Confidence 45789999999884
No 170
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.50 E-value=24 Score=19.92 Aligned_cols=29 Identities=14% Similarity=0.189 Sum_probs=19.9
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+|++|.....+.|++ .....|.++.
T Consensus 14 ~~l~V~nLp~~~t~~~l~~~f~~~G~i~~v~ 44 (103)
T 2dnm_A 14 ITLKVDNLTYRTSPDSLRRVFEKYGRVGDVY 44 (103)
T ss_dssp CEEEEESCCTTCCHHHHHHHHTTTSCEEEEE
T ss_pred eEEEEeCCCCCCCHHHHHHHHHhcCCEEEEE
Confidence 3699999998877777665 4444555544
No 171
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=43.44 E-value=71 Score=22.75 Aligned_cols=85 Identities=9% Similarity=0.010 Sum_probs=37.2
Q ss_pred HHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHH------HHHHHHHHHHHHHcCCeEEEEc
Q psy7473 45 NKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDK------LERGVDFIQRISKTGGTVYVHC 118 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~------~~~~~~~i~~~~~~~~~VlVHC 118 (136)
+.|++.|.+.++ ++++... +.+.....|+.++.+|..........+. +...+....+.+++.+|=+|++
T Consensus 24 ~~L~~~g~~V~~-vg~~~g~----e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~ 98 (365)
T 3s2u_A 24 REFQARGYAVHW-LGTPRGI----ENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLFQALRVIRQLRPVCVLG 98 (365)
T ss_dssp HHHHHTTCEEEE-EECSSST----HHHHTGGGTCCEEECC--------------CHHHHHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHhCCCEEEE-EECCchH----hhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 456677765443 2322110 1223445678877777654321221111 1111112223334446778888
Q ss_pred CCCCChHHHHHHHHhh
Q psy7473 119 KAGRTRSATLVGCYLM 134 (136)
Q Consensus 119 ~~G~~RS~~v~~ayLm 134 (136)
..|..=-+...+|.++
T Consensus 99 ~g~~~s~p~~laA~~~ 114 (365)
T 3s2u_A 99 LGGYVTGPGGLAARLN 114 (365)
T ss_dssp CSSSTHHHHHHHHHHT
T ss_pred cCCcchHHHHHHHHHc
Confidence 8886544455556554
No 172
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=43.35 E-value=12 Score=27.50 Aligned_cols=13 Identities=38% Similarity=0.815 Sum_probs=11.0
Q ss_pred HcCCeEEEEcCCC
Q psy7473 109 KTGGTVYVHCKAG 121 (136)
Q Consensus 109 ~~~~~VlVHC~~G 121 (136)
..|..||.||.+|
T Consensus 172 ~~g~~ILThcnsg 184 (374)
T 2yvk_A 172 KKGDRIMTICNAG 184 (374)
T ss_dssp CTTCEEEECSCCS
T ss_pred CCCCEEEEecCCC
Confidence 3678999999886
No 173
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=42.85 E-value=20 Score=20.98 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=19.9
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
.+||+|+.|...+.+.|++ .....|.++.
T Consensus 6 ~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~ 36 (115)
T 4f25_A 6 GNIFIKNLDKSIDNKALYDTFSAFGNILSCK 36 (115)
T ss_dssp CEEEEESCCTTCCHHHHHHHHGGGSCEEEEE
T ss_pred CEEEECCCCCCCCHHHHHHHHhccCCEEEEE
Confidence 3699999998877777666 3344555443
No 174
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=42.67 E-value=25 Score=20.04 Aligned_cols=27 Identities=26% Similarity=0.348 Sum_probs=19.2
Q ss_pred cEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 32 NIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
+||+|+.|.....+.|++ ..+..|.++
T Consensus 21 ~lfV~nLp~~~te~~L~~~F~~~G~I~~v 49 (99)
T 4fxv_A 21 NLIVNYLPQNMTQDELRSLFSSIGEVESA 49 (99)
T ss_dssp EEEEESCCTTCCHHHHHHHHHTTSCEEEE
T ss_pred EEEEeCCCCCCCHHHHHHHHHhcCCEEEe
Confidence 699999998887777666 344455544
No 175
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=41.15 E-value=26 Score=23.12 Aligned_cols=19 Identities=21% Similarity=0.499 Sum_probs=13.1
Q ss_pred cCCeE--EEEcC-CCCChHHHHH
Q psy7473 110 TGGTV--YVHCK-AGRTRSATLV 129 (136)
Q Consensus 110 ~~~~V--lVHC~-~G~~RS~~v~ 129 (136)
.+++| ++||. .| .||...+
T Consensus 108 ~d~~ivvVvyC~~sG-~rs~~aa 129 (211)
T 1qb0_A 108 LDKRVILIFHCEFSS-ERGPRMC 129 (211)
T ss_dssp TTSEEEEEEECSSSS-SHHHHHH
T ss_pred CCCCeEEEEECCCCC-ccHHHHH
Confidence 45677 78999 77 4875543
No 176
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=40.89 E-value=58 Score=24.22 Aligned_cols=19 Identities=0% Similarity=-0.081 Sum_probs=13.7
Q ss_pred HHHHHHcCCeEEEEcCCCC
Q psy7473 104 IQRISKTGGTVYVHCKAGR 122 (136)
Q Consensus 104 i~~~~~~~~~VlVHC~~G~ 122 (136)
+......+.+|+|.|..|.
T Consensus 319 ~~~l~~~~~~vvvy~~~~~ 337 (474)
T 3tp9_A 319 AGWLLPADRPIHLLAADAI 337 (474)
T ss_dssp HHHHCCSSSCEEEECCTTT
T ss_pred HHhcCCCCCeEEEEECCCc
Confidence 3333456789999999875
No 177
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=40.78 E-value=49 Score=24.10 Aligned_cols=79 Identities=10% Similarity=0.045 Sum_probs=45.4
Q ss_pred cHHHHHhcCCCEEEEcccCc-----cc--ccccC--hhhhhhcCC-eEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCC
Q psy7473 43 LTNKLLEENVKGVVSMNEDY-----EL--YFANG--REEWNKVGV-EFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGG 112 (136)
Q Consensus 43 ~~~~l~~~gi~~Vi~l~~~~-----~~--~~~~~--~~~~~~~~i-~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~ 112 (136)
-.+.|.+.|++.|+-+.... |. .+..+ .+.+...|+ +|.++|..+++ ...++.+.+.+.+.++.++
T Consensus 254 ~l~~L~~~G~k~vvv~P~gFvsD~lETL~Eid~E~~~e~a~e~G~~~~~rip~LNd~----p~fi~~La~lv~~~l~~~~ 329 (359)
T 3hcn_A 254 SIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGN----PLFSKALADLVHSHIQSNE 329 (359)
T ss_dssp HHHHHHHTTCCEEEEECTTCCSCCCCCHHHHCHHHHHHHHHHTCCCEEEECCCSTTC----HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCeEEEECCccchhhHHhHHHHHHHHHHHHHHhCCCceEEEcCCCCCC----HHHHHHHHHHHHHHHhcCC
Confidence 34567778999998776432 11 11111 123456788 69999987654 2455666677777765533
Q ss_pred ----eEEEEcCCCCChH
Q psy7473 113 ----TVYVHCKAGRTRS 125 (136)
Q Consensus 113 ----~VlVHC~~G~~RS 125 (136)
....-|...++.+
T Consensus 330 ~~~~~~~~~c~~c~~~~ 346 (359)
T 3hcn_A 330 LCSKQLTLSCPLCVNPV 346 (359)
T ss_dssp SSCGGGGSCCTTCCCHH
T ss_pred ccCcccCCCCCCCCchh
Confidence 2233355555443
No 178
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=40.42 E-value=6.4 Score=24.42 Aligned_cols=14 Identities=14% Similarity=-0.026 Sum_probs=11.4
Q ss_pred HcCCeEEEEcCCCC
Q psy7473 109 KTGGTVYVHCKAGR 122 (136)
Q Consensus 109 ~~~~~VlVHC~~G~ 122 (136)
..+.+|+|+|..|.
T Consensus 90 ~~~~~iVvyc~~g~ 103 (154)
T 1hzm_A 90 CGTDTVVLYDESSS 103 (154)
T ss_dssp TTSSCEEECCCSSS
T ss_pred CCCCeEEEEeCCCC
Confidence 35679999999885
No 179
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=40.07 E-value=28 Score=24.99 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCCCCChH
Q psy7473 94 QDKLERGVDFIQRISKTGGTVYVHCKAGRTRS 125 (136)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS 125 (136)
.+.+++-++.+.+.+++.++|+|...+|+|-+
T Consensus 27 p~~l~~~i~~l~~~i~~a~~ivvlTGAGISte 58 (318)
T 3k35_A 27 PEELERKVWELARLVWQSSSVVFHTGAGISTA 58 (318)
T ss_dssp HHHHHHHHHHHHHHHHHCSCEEEEECGGGSGG
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeccccChh
Confidence 44555555555566666689999999999854
No 180
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=39.12 E-value=36 Score=22.83 Aligned_cols=23 Identities=17% Similarity=0.342 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 98 ERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 98 ~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
+.+...++.+.+.|.||.|||..
T Consensus 112 ~~f~~~l~~a~~~~lpv~iH~~~ 134 (264)
T 1xwy_A 112 RAFVAQLRIAADLNMPVFMHCRD 134 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHHHHHHHhCCcEEEEcCC
Confidence 34555566666678899999853
No 181
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=38.87 E-value=18 Score=25.96 Aligned_cols=34 Identities=12% Similarity=0.123 Sum_probs=20.6
Q ss_pred chHHHHHHHHHHHHHHHH-cCCeEEEEcCCCCChH
Q psy7473 92 PDQDKLERGVDFIQRISK-TGGTVYVHCKAGRTRS 125 (136)
Q Consensus 92 ~~~~~~~~~~~~i~~~~~-~~~~VlVHC~~G~~RS 125 (136)
+...+.+-+.+.++-+.+ .+.||.|||.......
T Consensus 148 ~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~A~~d~ 182 (325)
T 3ipw_A 148 DKETQLSGYRTLSILHQKYPYLPFFFHCRKSWSDL 182 (325)
T ss_dssp CHHHHHHHHHHTHHHHHHCTTCCEEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhhCCeEEEEeCchHHHH
Confidence 334455555556666666 6777777777655443
No 182
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=38.58 E-value=30 Score=25.31 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCCCCChH
Q psy7473 94 QDKLERGVDFIQRISKTGGTVYVHCKAGRTRS 125 (136)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS 125 (136)
.+.+++-++.+.+.+++.++|+|.+.+|+|-+
T Consensus 27 p~~l~~~i~~la~~i~~a~~iVvlTGAGISte 58 (355)
T 3pki_A 27 PEELERKVWELARLVWQSSSVVFHTGAGISTA 58 (355)
T ss_dssp HHHHHHHHHHHHHHHHHCSSEEEEECGGGSGG
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeccccchh
Confidence 44555555555566666689999999999854
No 183
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=38.07 E-value=15 Score=26.72 Aligned_cols=13 Identities=54% Similarity=1.104 Sum_probs=10.8
Q ss_pred HcCCeEEEEcCCC
Q psy7473 109 KTGGTVYVHCKAG 121 (136)
Q Consensus 109 ~~~~~VlVHC~~G 121 (136)
..|..||.||.+|
T Consensus 147 ~~g~~ILThcns~ 159 (347)
T 1t9k_A 147 KDGSTILTHCNAG 159 (347)
T ss_dssp CTTEEEEECSCCS
T ss_pred CCCCEEEEecCCC
Confidence 3577999999887
No 184
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=37.97 E-value=47 Score=26.20 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=25.5
Q ss_pred hhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 71 EEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 71 ~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
..++..|+.++ +++.+ . ++++.+.++++.+.++|++|||..
T Consensus 200 ~~~~a~G~~~~--~vdGh----d---~~~l~~al~~A~~~~~P~lI~v~T 240 (632)
T 3l84_A 200 MRFEAQGFEVL--SINGH----D---YEEINKALEQAKKSTKPCLIIAKT 240 (632)
T ss_dssp HHHHHTTCEEE--EEETT----C---HHHHHHHHHHHHTCSSCEEEEEEC
T ss_pred HHHHHcCCeEE--EEeeC----C---HHHHHHHHHHHHhCCCCEEEEEee
Confidence 44566788876 34321 1 334445555666678999999964
No 185
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=37.96 E-value=39 Score=18.66 Aligned_cols=30 Identities=13% Similarity=0.141 Sum_probs=22.1
Q ss_pred cCcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 30 DENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
...||+|+.|.....+.|++ .....|.++.
T Consensus 11 ~~~l~V~~Lp~~~te~~L~~~F~~~G~i~~v~ 42 (89)
T 3d2w_A 11 GSKVFVGRCTEDMTAEELQQFFCQYGEVVDVF 42 (89)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHTTTSCEEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHhccCCEEEEE
Confidence 34699999999888887776 5555666654
No 186
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=37.80 E-value=27 Score=20.68 Aligned_cols=18 Identities=17% Similarity=0.279 Sum_probs=14.2
Q ss_pred CeEEEEcCCCCChHHHHH
Q psy7473 112 GTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 112 ~~VlVHC~~G~~RS~~v~ 129 (136)
.+|++=|.+|+|=|-.++
T Consensus 22 kkIlvvC~sG~gTS~ll~ 39 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAA 39 (113)
T ss_dssp EEEEEESCSCSSHHHHHH
T ss_pred cEEEEECCCCHHHHHHHH
Confidence 479999999999775443
No 187
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=37.14 E-value=31 Score=20.58 Aligned_cols=14 Identities=7% Similarity=0.014 Sum_probs=11.6
Q ss_pred CCeEEEEcCCCCChH
Q psy7473 111 GGTVYVHCKAGRTRS 125 (136)
Q Consensus 111 ~~~VlVHC~~G~~RS 125 (136)
+.+|+|+|..|. |+
T Consensus 83 ~~~ivvyc~~g~-~~ 96 (142)
T 2ouc_A 83 SKEIIVYDENTN-EP 96 (142)
T ss_dssp HSCEEEECSSCC-CG
T ss_pred CCcEEEEECCCC-ch
Confidence 478999999996 65
No 188
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=37.00 E-value=15 Score=21.73 Aligned_cols=18 Identities=22% Similarity=0.292 Sum_probs=13.9
Q ss_pred CeEEEEcCCCCChHHHHH
Q psy7473 112 GTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 112 ~~VlVHC~~G~~RS~~v~ 129 (136)
.+|++-|.+|+|-|-.+.
T Consensus 19 ~kIlvvC~sG~gTS~m~~ 36 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIK 36 (110)
T ss_dssp EEEEEECCCCHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHH
Confidence 579999999998774443
No 189
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=36.86 E-value=41 Score=23.58 Aligned_cols=48 Identities=13% Similarity=0.142 Sum_probs=29.2
Q ss_pred hcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcC--CCCChH
Q psy7473 75 KVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCK--AGRTRS 125 (136)
Q Consensus 75 ~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS 125 (136)
..|...+.++ |......+....+.++.|.+.. ++-++-+||+ .|.+=+
T Consensus 170 ~~G~d~i~l~--DT~G~~~P~~~~~lv~~l~~~~-~~~~l~~H~Hn~~Gla~A 219 (302)
T 2ftp_A 170 QMGCYEVSLG--DTIGVGTAGATRRLIEAVASEV-PRERLAGHFHDTYGQALA 219 (302)
T ss_dssp HTTCSEEEEE--ESSSCCCHHHHHHHHHHHTTTS-CGGGEEEEEBCTTSCHHH
T ss_pred HcCCCEEEEe--CCCCCcCHHHHHHHHHHHHHhC-CCCeEEEEeCCCccHHHH
Confidence 5677777766 5443445666666666665543 1358999994 454433
No 190
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=36.78 E-value=71 Score=22.18 Aligned_cols=48 Identities=19% Similarity=0.279 Sum_probs=30.6
Q ss_pred hcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEc--CCCCChH
Q psy7473 75 KVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHC--KAGRTRS 125 (136)
Q Consensus 75 ~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC--~~G~~RS 125 (136)
..|...+.++ |......+....+.++.+.+... +-++-+|| ..|.+-+
T Consensus 166 ~~G~d~i~l~--Dt~G~~~P~~~~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~a 215 (295)
T 1ydn_A 166 SLGCHEVSLG--DTIGRGTPDTVAAMLDAVLAIAP-AHSLAGHYHDTGGRALD 215 (295)
T ss_dssp HHTCSEEEEE--ETTSCCCHHHHHHHHHHHHTTSC-GGGEEEEEBCTTSCHHH
T ss_pred hcCCCEEEec--CCCCCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCcchHHH
Confidence 5788877777 44434556677777777765442 25799999 4554433
No 191
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=35.85 E-value=92 Score=20.93 Aligned_cols=65 Identities=15% Similarity=0.134 Sum_probs=35.1
Q ss_pred HHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCC
Q psy7473 45 NKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAG 121 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G 121 (136)
..|.+.|.+.++.-+.+... .+.....+..++...+.| .+.++++++.+.+... +=.++|||.+.
T Consensus 45 ~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~Dv~~------~~~v~~~~~~~~~~~g-~iD~lv~nAg~ 109 (260)
T 3gem_A 45 LRLLEHGHRVIISYRTEHAS-----VTELRQAGAVALYGDFSC------ETGIMAFIDLLKTQTS-SLRAVVHNASE 109 (260)
T ss_dssp HHHHHTTCCEEEEESSCCHH-----HHHHHHHTCEEEECCTTS------HHHHHHHHHHHHHHCS-CCSEEEECCCC
T ss_pred HHHHHCCCEEEEEeCChHHH-----HHHHHhcCCeEEECCCCC------HHHHHHHHHHHHHhcC-CCCEEEECCCc
Confidence 45777898877765544321 223334455554433332 3455655555544321 23699999764
No 192
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=35.76 E-value=30 Score=25.30 Aligned_cols=34 Identities=9% Similarity=0.021 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK--AGRTRSATLVG 130 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v~~ 130 (136)
+.++.+.++.+...|-++.+||. .|+++++++-.
T Consensus 277 it~~~~i~~~A~~~gi~~~~~~~~es~ig~aa~~hl 312 (389)
T 3s5s_A 277 IAEALDIAAVARAAGLGLMIGGMVESVLAMTASACF 312 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEecCCcccHHHHHHHHHH
Confidence 56666667777788999999996 55666655443
No 193
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=35.62 E-value=27 Score=25.25 Aligned_cols=34 Identities=12% Similarity=0.018 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK--AGRTRSATLVG 130 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v~~ 130 (136)
+.++.+.++.+...|-++.+||. .|+++++++-.
T Consensus 276 it~~~~i~~~A~~~gi~~~~~~~~es~ig~aa~~hl 311 (365)
T 3ik4_A 276 VAEGLKMIAIAQAAGLGLMIGGMVESILAMSFSANL 311 (365)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEecCCcccHHHHHHHHHH
Confidence 45556666666778899999996 56666655443
No 194
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=35.07 E-value=34 Score=23.75 Aligned_cols=27 Identities=15% Similarity=0.279 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 94 QDKLERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
..+.+.+...++.+.+.+.||.|||..
T Consensus 123 ~~Q~~~f~~ql~lA~~~~lPv~iH~r~ 149 (301)
T 2xio_A 123 DTQLKYFEKQFELSEQTKLPMFLHCRN 149 (301)
T ss_dssp HHHHHHHHHTHHHHHHHCCCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecC
Confidence 334444555555666668889999853
No 195
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=34.87 E-value=37 Score=21.44 Aligned_cols=19 Identities=16% Similarity=0.300 Sum_probs=11.0
Q ss_pred cCCeEE--EEcC-CCCChHHHHH
Q psy7473 110 TGGTVY--VHCK-AGRTRSATLV 129 (136)
Q Consensus 110 ~~~~Vl--VHC~-~G~~RS~~v~ 129 (136)
.+++|+ +||. .| .||...+
T Consensus 88 ~~~~ivvv~yC~~~g-~rs~~aa 109 (175)
T 2a2k_A 88 LDKRVILIFHSEFSS-ERGPRMC 109 (175)
T ss_dssp --CEEEEEEECSSSS-SHHHHHH
T ss_pred CCCCeEEEEECCCCC-CccHHHH
Confidence 456774 4898 66 4876543
No 196
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=34.79 E-value=8.2 Score=28.97 Aligned_cols=18 Identities=39% Similarity=0.877 Sum_probs=0.0
Q ss_pred HcCCeEEEEcCCCCChHHH
Q psy7473 109 KTGGTVYVHCKAGRTRSAT 127 (136)
Q Consensus 109 ~~~~~VlVHC~~G~~RS~~ 127 (136)
..+++|+++|..|. ||..
T Consensus 423 ~~~~~iv~~C~~G~-rs~~ 440 (466)
T 3r2u_A 423 NKNDVIYVHCQSGI-RSSI 440 (466)
T ss_dssp -------------------
T ss_pred CCCCeEEEECCCCh-HHHH
Confidence 35679999999884 7754
No 197
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=34.32 E-value=40 Score=24.15 Aligned_cols=25 Identities=20% Similarity=0.310 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHcCCeEEEEcCCCC
Q psy7473 98 ERGVDFIQRISKTGGTVYVHCKAGR 122 (136)
Q Consensus 98 ~~~~~~i~~~~~~~~~VlVHC~~G~ 122 (136)
+++++.+++......+.++||..|-
T Consensus 180 ~d~l~iL~~~~~~~~~gViH~FsGs 204 (325)
T 3ipw_A 180 SDLCQLNKELGYNGCKGVVHCFDGT 204 (325)
T ss_dssp HHHHHHHHHTTCTTSCEEECSCCCC
T ss_pred HHHHHHHHhcCCCCCcEEEEECCCC
Confidence 3444444433222235778999883
No 198
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=33.82 E-value=81 Score=21.05 Aligned_cols=75 Identities=16% Similarity=0.190 Sum_probs=38.1
Q ss_pred HHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEE--cCCCCC
Q psy7473 46 KLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVH--CKAGRT 123 (136)
Q Consensus 46 ~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVH--C~~G~~ 123 (136)
..++.||++||--+...+.... -.+.+ .|++.+.+.-.-....|....|++ +..++..+.|.+|+-. =.+|+.
T Consensus 38 ra~e~~Ik~iVVAS~sG~TA~k-~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~--e~~~~L~~~G~~V~t~tH~lsgve 112 (201)
T 1vp8_A 38 RAKELGIKHLVVASSYGDTAMK-ALEMA--EGLEVVVVTYHTGFVREGENTMPP--EVEEELRKRGAKIVRQSHILSGLE 112 (201)
T ss_dssp HHHHHTCCEEEEECSSSHHHHH-HHHHC--TTCEEEEEECCTTSSSTTCCSSCH--HHHHHHHHTTCEEEECCCTTTTTH
T ss_pred HHHHcCCCEEEEEeCCChHHHH-HHHHh--cCCeEEEEeCcCCCCCCCCCcCCH--HHHHHHHhCCCEEEEEeccccchh
Confidence 3566899999988877653000 00111 456666665322221222111211 2222344678888874 455776
Q ss_pred hH
Q psy7473 124 RS 125 (136)
Q Consensus 124 RS 125 (136)
|+
T Consensus 113 R~ 114 (201)
T 1vp8_A 113 RS 114 (201)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 199
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=33.38 E-value=32 Score=24.50 Aligned_cols=33 Identities=6% Similarity=0.239 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHH
Q psy7473 96 KLERGVDFIQRISKTGGTVYVHCK--AGRTRSATL 128 (136)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v 128 (136)
-+.++.+.++.+...|-++.+||. .|+++++++
T Consensus 270 Git~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~ 304 (345)
T 2zad_A 270 GISDALAIVEIAESSGLKLMIGCMGESSLGINQSV 304 (345)
T ss_dssp HHHHHHHHHHHHHTTTCEEEECCSSCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHH
Confidence 356666777777788889999997 345555443
No 200
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=32.94 E-value=30 Score=24.54 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCCC--CChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKAG--RTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~G--~~RS~~v 128 (136)
+.++.+.++.+...|-+|.+||..+ +++++++
T Consensus 255 it~~~~i~~~A~~~gi~~~~~~~~es~i~~aa~~ 288 (329)
T 4gfi_A 255 LTEALVMKAEAERLGFTIMVGCMLGTSLGMAPAV 288 (329)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEECCcchhHHHHHHHH
Confidence 6777788888888899999999754 4444443
No 201
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=32.93 E-value=18 Score=20.23 Aligned_cols=14 Identities=21% Similarity=0.223 Sum_probs=11.8
Q ss_pred HcCCeEEEEcCCCC
Q psy7473 109 KTGGTVYVHCKAGR 122 (136)
Q Consensus 109 ~~~~~VlVHC~~G~ 122 (136)
..|.-||+||+.|+
T Consensus 28 ~eGeDVLarwsDGl 41 (79)
T 2m0o_A 28 WEGQDVLARWTDGL 41 (79)
T ss_dssp CTTCEEEBCCTTSC
T ss_pred ccCCEEEEEecCCC
Confidence 46789999999985
No 202
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=32.91 E-value=93 Score=20.97 Aligned_cols=67 Identities=10% Similarity=0.041 Sum_probs=32.5
Q ss_pred HHHHhcCCCEEEEcccCcccccccChhhhhh--cCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCC
Q psy7473 45 NKLLEENVKGVVSMNEDYELYFANGREEWNK--VGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGR 122 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~--~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~ 122 (136)
..|.+.|.+.++.-+..... .+..+. ..+.++...+.| .+.++++++.+ +.. .+-.++|||.+|.
T Consensus 48 ~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~~~~~~~~~Dl~~------~~~v~~~~~~~-~~~-~~id~lv~~aag~ 114 (281)
T 3ppi_A 48 RRLHADGLGVVIADLAAEKG-----KALADELGNRAEFVSTNVTS------EDSVLAAIEAA-NQL-GRLRYAVVAHGGF 114 (281)
T ss_dssp HHHHHTTCEEEEEESCHHHH-----HHHHHHHCTTEEEEECCTTC------HHHHHHHHHHH-TTS-SEEEEEEECCCCC
T ss_pred HHHHHCCCEEEEEeCChHHH-----HHHHHHhCCceEEEEcCCCC------HHHHHHHHHHH-HHh-CCCCeEEEccCcc
Confidence 45777898766654433221 111111 223333332222 34555555554 211 1236899998886
Q ss_pred Ch
Q psy7473 123 TR 124 (136)
Q Consensus 123 ~R 124 (136)
+.
T Consensus 115 ~~ 116 (281)
T 3ppi_A 115 GV 116 (281)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 203
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=32.73 E-value=36 Score=17.77 Aligned_cols=18 Identities=17% Similarity=0.372 Sum_probs=14.0
Q ss_pred cEEEeCCCCcccHHHHHh
Q psy7473 32 NIILGALPFKRLTNKLLE 49 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~ 49 (136)
+||+|+.|.....+.|++
T Consensus 1 ~l~v~nlp~~~t~~~l~~ 18 (75)
T 2mss_A 1 KIFVGGLSVNTTVEDVKH 18 (75)
T ss_dssp CEEEECCCSSCCHHHHHH
T ss_pred CEEEecCCCCCCHHHHHH
Confidence 489999998877776655
No 204
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=32.32 E-value=1.1e+02 Score=24.00 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHH
Q psy7473 94 QDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
.+..+++.+.+.+..+.+++|+|.|.+ .||+--++
T Consensus 391 ~~~~~~l~~~i~~~~~~~g~vlIp~fa-~GR~qell 425 (636)
T 2ycb_A 391 NRAEKELVKTIYSTLRRGGKILIPVFA-VGRAQELM 425 (636)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCT-TTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECC-CcHHHHHH
Confidence 344567777888877788999999986 78875544
No 205
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=32.12 E-value=47 Score=17.61 Aligned_cols=27 Identities=19% Similarity=0.250 Sum_probs=18.1
Q ss_pred cEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 32 NIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
.||+|+.|.....+.|++ .....|.++
T Consensus 3 ~l~V~nlp~~~t~~~l~~~f~~~G~i~~~ 31 (83)
T 3md1_A 3 NLFVGDLNVNVDDETLRNAFKDFPSYLSG 31 (83)
T ss_dssp EEEEECCCTTCCHHHHHHHHTTSTTEEEE
T ss_pred EEEEeCCCCCCCHHHHHHHHHhcCCeeEE
Confidence 589999998877777665 333344443
No 206
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=32.10 E-value=52 Score=22.26 Aligned_cols=26 Identities=19% Similarity=0.075 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 95 DKLERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
.+-+.+...++.+.+.|.||.|||..
T Consensus 117 ~q~~~f~~~~~~a~~~~lPv~iH~~~ 142 (268)
T 1j6o_A 117 VQKRVFVEQIELAGKLNLPLVVHIRD 142 (268)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeCc
Confidence 34445555566666778899999963
No 207
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=31.96 E-value=1.3e+02 Score=20.94 Aligned_cols=83 Identities=20% Similarity=0.235 Sum_probs=40.3
Q ss_pred cccHHHHHhcC-CCEEEEcccCcccccccChhhhhhcCCeEEEeeCC----CCCC------CchHHHHHHHHHHHHHHHH
Q psy7473 41 KRLTNKLLEEN-VKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTR----DIFD------TPDQDKLERGVDFIQRISK 109 (136)
Q Consensus 41 ~~~~~~l~~~g-i~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~----D~~~------~~~~~~~~~~~~~i~~~~~ 109 (136)
....+.+++.| +....++.......+... ...+..+..+|+. |... ....+.++.+.+.++...+
T Consensus 170 ~~~~~~l~~~G~~~y~ss~~~~d~Py~~~~----~~~~~~~~~iP~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 245 (308)
T 3cl6_A 170 PNTRRLVMEEGGFLYDCDTYDDDLPYWEPN----NPTGKPHLVIPYTLDTNDMRFTQVQGFNKGDDFFEYLKDAFDVLYA 245 (308)
T ss_dssp TTHHHHHHHHCCCSEECCCCCCSSCEECSC----CTTCSCCEECCCCSSSBGGGGGSSSCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCceEEeccCCCCCceeeec----CCCCCCEEEEccccccCceeeeccCCCCCHHHHHHHHHHHHHHHHH
Confidence 44556677788 888777665432111110 0012224445543 2110 1122334444555555556
Q ss_pred cCC------eEEEEcCCCCChHHHH
Q psy7473 110 TGG------TVYVHCKAGRTRSATL 128 (136)
Q Consensus 110 ~~~------~VlVHC~~G~~RS~~v 128 (136)
+|+ .|+.||.. .+|..++
T Consensus 246 ~g~~~p~~~~Il~H~~~-~g~~~~~ 269 (308)
T 3cl6_A 246 EGAEAPKMLSIGLHCRL-IGRPARL 269 (308)
T ss_dssp HTTTSCEEEEEEEEHHH-HTSHHHH
T ss_pred cCCCCCcEEEEEeCccc-cCCHHHH
Confidence 665 67899973 3455443
No 208
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.83 E-value=44 Score=19.19 Aligned_cols=29 Identities=14% Similarity=0.334 Sum_probs=19.7
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+|++|.....+.|++ .....|.++.
T Consensus 12 ~~lfV~~Lp~~~te~~L~~~F~~~G~v~~v~ 42 (103)
T 1s79_A 12 RSVYIKGFPTDATLDDIKEWLEDKGQVLNIQ 42 (103)
T ss_dssp GCEEEECCCTTCCHHHHHHHHHTSSCEEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHhhcCCEEEEE
Confidence 3599999998877777665 3444555544
No 209
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=31.51 E-value=79 Score=18.38 Aligned_cols=28 Identities=0% Similarity=0.087 Sum_probs=18.5
Q ss_pred cEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 32 NIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
.||++++|.....+.|++ ..+..|.++.
T Consensus 24 ~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~ 53 (126)
T 3ex7_B 24 ILFVTGVHEEATEEDIHDKFAEYGEIKNIH 53 (126)
T ss_dssp EEEEESCCTTCCHHHHHHHHHTTSCEEEEE
T ss_pred EEEEeCCCCCCCHHHHHHHHHhcCCeEEEE
Confidence 599999998777766655 3333455443
No 210
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=31.33 E-value=35 Score=25.01 Aligned_cols=34 Identities=6% Similarity=-0.022 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK--AGRTRSATLVG 130 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v~~ 130 (136)
+.++.+.++.+...|-++.+||. .|+++++++-.
T Consensus 306 it~~~~ia~~A~~~gi~~~~~~~~es~ig~aa~~hl 341 (393)
T 3u9i_A 306 IVEALDIAAIARTAGLHLMIGGMVESLLAMTVSACF 341 (393)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEecCCcccHHHHHHHHHH
Confidence 45566666666778899999996 56666655443
No 211
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=30.88 E-value=67 Score=23.90 Aligned_cols=41 Identities=17% Similarity=0.374 Sum_probs=30.9
Q ss_pred EeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCC
Q psy7473 82 QLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGR 122 (136)
Q Consensus 82 ~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~ 122 (136)
++|+.|.+.-.+...++.++.-|+..+++|.+|.+-.+.|+
T Consensus 27 NVP~~~~g~Itdd~RI~aalpTI~~ll~~GakVil~SHlGR 67 (403)
T 3q3v_A 27 NVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGR 67 (403)
T ss_dssp CCCBCTTCCBSCCHHHHHHHHHHHHHHHTTCEEEEECCCSC
T ss_pred CCCcCCCCcccChHHHHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 46776633244556789999999999999999888777774
No 212
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=30.82 E-value=60 Score=17.40 Aligned_cols=29 Identities=17% Similarity=0.351 Sum_probs=20.0
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+|+.|.....+.|++ .....|.++.
T Consensus 12 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~ 42 (87)
T 3s7r_A 12 GKMFVGGLSWDTSKKDLKDYFTKFGEVVDCT 42 (87)
T ss_dssp TEEEEECCCTTCCHHHHHHHHTTTSCEEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhCCCEEEEE
Confidence 3699999998877777666 4444555443
No 213
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=30.81 E-value=63 Score=21.05 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHH
Q psy7473 95 DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
+.++++++.+.+.+.++++|++- |.|.|..++
T Consensus 48 ~~i~~~~~~i~~~l~~~~~I~i~---G~G~S~~~A 79 (212)
T 2i2w_A 48 HAIQRAAVLLADSFKAGGKVLSC---GNGGSHCDA 79 (212)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEE---ESTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEE---eCCHHHHHH
Confidence 34566666665566677888773 555665544
No 214
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=30.73 E-value=42 Score=24.52 Aligned_cols=32 Identities=9% Similarity=-0.048 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK--AGRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v 128 (136)
+.++.+..+.+...|-++.+||. .|+++++++
T Consensus 275 it~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~ 308 (391)
T 3gd6_A 275 LTSAKKAAYAAEVASKDVVLGTTQELSVGTAAMA 308 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEecCCCccHHHHHHHH
Confidence 45566666666778899999996 456565544
No 215
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=30.66 E-value=86 Score=22.30 Aligned_cols=71 Identities=13% Similarity=0.045 Sum_probs=43.8
Q ss_pred cHHHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcC
Q psy7473 43 LTNKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCK 119 (136)
Q Consensus 43 ~~~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~ 119 (136)
....+.++|.+- .|-..... ......+..|++++++++...+ .+....++.+.+.++.+.+.|=+|++=..
T Consensus 11 ~~~~~e~~g~~~-~~~~G~~~----d~~~ilk~~G~N~VRi~~w~~P-~~g~~~~~~~~~~~~~A~~~GlkV~ld~H 81 (332)
T 1hjs_A 11 SVVVEERAGVSY-KNTNGNAQ----PLENILAANGVNTVRQRVWVNP-ADGNYNLDYNIAIAKRAKAAGLGVYIDFH 81 (332)
T ss_dssp THHHHHHTTCCC-BCTTSCBC----CHHHHHHHTTCCEEEEEECSSC-TTCTTSHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHcCCEE-ECCCCCcc----cHHHHHHHCCCCEEEEeeeeCC-CCCcCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 345667777765 22211111 1134446789999999875333 23334567777888888888889988654
No 216
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=30.51 E-value=1.2e+02 Score=21.89 Aligned_cols=29 Identities=3% Similarity=-0.114 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHHHHHHHc-CCeEEEEc-CCC
Q psy7473 93 DQDKLERGVDFIQRISKT-GGTVYVHC-KAG 121 (136)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~-~~~VlVHC-~~G 121 (136)
...+.+.+...++-+.+. |.||.||| ..|
T Consensus 174 t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~ 204 (365)
T 3rhg_A 174 TDGEKNSLRAAALAQNNNPYASMNIHMPGWQ 204 (365)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCEEEEECCTTS
T ss_pred CHHHHHHHHHHHHHHHHhcCCcEEEECCCCC
Confidence 344555555666666677 99999999 533
No 217
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=30.48 E-value=92 Score=19.73 Aligned_cols=31 Identities=16% Similarity=0.183 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHH
Q psy7473 96 KLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
.+++.++.+.+.+.++++|++. |.|.|+.++
T Consensus 26 ~i~~~~~~~~~~i~~a~~I~i~---G~G~S~~~A 56 (196)
T 2yva_A 26 AISRAAMTLVQSLLNGNKILCC---GNGTSAANA 56 (196)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE---ESTHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEE---eCchhhHHH
Confidence 3445555555566667888773 555665443
No 218
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=30.42 E-value=37 Score=24.40 Aligned_cols=32 Identities=13% Similarity=0.102 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK--AGRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v 128 (136)
+.++.+.++.+.+.|-++.+||. .|+++++.+
T Consensus 276 it~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~ 309 (370)
T 1nu5_A 276 IANTLKVAAVAEAAGISSYGGTMLDSTVGTAAAL 309 (370)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEecCCcchHHHHHHHH
Confidence 45556666666778889999996 445555443
No 219
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=30.29 E-value=68 Score=20.31 Aligned_cols=49 Identities=20% Similarity=0.140 Sum_probs=25.2
Q ss_pred hhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcC--CeEEEEcCCCCChH
Q psy7473 73 WNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTG--GTVYVHCKAGRTRS 125 (136)
Q Consensus 73 ~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~--~~VlVHC~~G~~RS 125 (136)
.+..|.++..+...+....+ +..+...+.+....| ..-.+=|..|+|=|
T Consensus 22 L~~~G~eV~D~G~~~~~~~d----Ypd~a~~va~~V~~g~~d~GIliCGTGiG~s 72 (149)
T 3he8_A 22 LKKRGYEVIDFGTHGNESVD----YPDFGLKVAEAVKSGECDRGIVICGTGLGIS 72 (149)
T ss_dssp HHHTTCEEEECCCCSSSCCC----HHHHHHHHHHHHHTTSSSEEEEEESSSHHHH
T ss_pred HHHCCCEEEEcCCCCCCCCC----HHHHHHHHHHHHHcCCCCEEEEEcCCcHHHH
Confidence 44567777766654432122 333334444444333 24445599998643
No 220
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=30.14 E-value=51 Score=19.76 Aligned_cols=23 Identities=13% Similarity=0.460 Sum_probs=17.7
Q ss_pred HHHHHHHHHcCCeEEEEcCCCCC
Q psy7473 101 VDFIQRISKTGGTVYVHCKAGRT 123 (136)
Q Consensus 101 ~~~i~~~~~~~~~VlVHC~~G~~ 123 (136)
++++.+....+++|.|.+..|..
T Consensus 29 l~lL~~~~~~~k~V~V~Lk~gr~ 51 (118)
T 1b34_B 29 LSVLTQSVKNNTQVLINCRNNKK 51 (118)
T ss_dssp HHHHHHHHHHTCEEEEEETTSCE
T ss_pred HHHHHHHhcCCcEEEEEECCCcE
Confidence 45666777667899999998853
No 221
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=29.92 E-value=43 Score=24.04 Aligned_cols=32 Identities=16% Similarity=0.122 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~v 128 (136)
+.++.+.++.+.+.|-++.+||.. |+++++.+
T Consensus 274 it~~~~i~~~A~~~g~~~~~~~~~es~i~~~a~~ 307 (369)
T 2p8b_A 274 IYPAVKLAHQAEMAGIECQVGSMVESSVASSAGF 307 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEecCCCccHHHHHHHH
Confidence 345555666666788899999973 44444433
No 222
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=29.83 E-value=48 Score=23.43 Aligned_cols=32 Identities=16% Similarity=0.078 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~v 128 (136)
+.++.+.++.+...|-++.+||.. |+++++++
T Consensus 244 it~~~~ia~~A~~~gi~~~~~~~~es~ig~aa~~ 277 (322)
T 1r6w_A 244 LEKVREQVQAAHALGLTAVISSSIESSLGLTQLA 277 (322)
T ss_dssp HHHHHHHHHHHHHTTCEEEEBCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEECccccHHHHHHHH
Confidence 677778888888889999999964 45555443
No 223
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=29.45 E-value=54 Score=23.65 Aligned_cols=32 Identities=13% Similarity=0.043 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK--AGRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v 128 (136)
+.++.+..+.+...|-++.+||. .|+++++++
T Consensus 276 it~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~ 309 (370)
T 1chr_A 276 VSATQKIAAVAEASGIASYGGTMLDSTIGTSVAL 309 (370)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCSCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEecCCCccHHHHHHHH
Confidence 46666666666778889999996 566665554
No 224
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=29.42 E-value=28 Score=24.89 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHcCCeEEEEcC--CCCChHHHHHH
Q psy7473 98 ERGVDFIQRISKTGGTVYVHCK--AGRTRSATLVG 130 (136)
Q Consensus 98 ~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v~~ 130 (136)
.++.+.++.+...|-++.+||. .|+++++++-.
T Consensus 252 t~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hl 286 (342)
T 2okt_A 252 DKVQTAIDTLKSHGAKVVIGGMYEYGLSRYFTAML 286 (342)
T ss_dssp GGHHHHHHHHHHTTCEEEEBCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEcCCcccHHHHHHHHHH
Confidence 3344445555667889999996 45556555433
No 225
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=29.42 E-value=64 Score=22.81 Aligned_cols=26 Identities=15% Similarity=-0.141 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcC
Q psy7473 94 QDKLERGVDFIQRISKTGGTVYVHCK 119 (136)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~VlVHC~ 119 (136)
..+.+.+...++-+.+.|.||.|||.
T Consensus 144 ~~q~~~f~~q~~lA~~~glPv~iH~~ 169 (330)
T 2ob3_A 144 PFQELVLKAAARASLATGVPVTTHTA 169 (330)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEECC
Confidence 33444444555556677899999995
No 226
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=29.36 E-value=41 Score=24.16 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~v 128 (136)
+.++.+.++.+...|-++.+||.. ++++++++
T Consensus 273 it~~~~i~~~a~~~gi~~~~~~~~es~i~~aa~~ 306 (356)
T 3ro6_B 273 LAPARRIATIAETAGIDLMWGCMDESRISIAAAL 306 (356)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEecCCcccHHHHHHHH
Confidence 455555666666788899999974 45555444
No 227
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=29.31 E-value=37 Score=24.23 Aligned_cols=31 Identities=19% Similarity=0.240 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSAT 127 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~ 127 (136)
+.++.+..+.+...|-++.+||.. +++++++
T Consensus 260 it~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~ 292 (338)
T 3ijl_A 260 MREAWKMVTLAHALGMRVMVGCMTETSCAISAA 292 (338)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEecCCcccHHHHHHH
Confidence 577777788888889999999974 4444433
No 228
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=29.07 E-value=72 Score=20.69 Aligned_cols=50 Identities=20% Similarity=0.112 Sum_probs=26.2
Q ss_pred hhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcC--CeEEEEcCCCCChH
Q psy7473 72 EWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTG--GTVYVHCKAGRTRS 125 (136)
Q Consensus 72 ~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~--~~VlVHC~~G~~RS 125 (136)
..+..|.++..+...+....+ +..+...+.+....| ..-++=|..|+|=|
T Consensus 41 ~L~~~G~eV~D~G~~~~~~~d----Ypd~a~~va~~V~~g~~d~GIliCGTGiG~s 92 (169)
T 3ph3_A 41 FLKKRGYEVIDFGTHGNESVD----YPDFGLKVAEAVKSGECDRGIVICGTGLGIS 92 (169)
T ss_dssp HHHHTTCEEEECCCCSSSCCC----HHHHHHHHHHHHHTTSSSEEEEEESSSHHHH
T ss_pred HHHHCCCEEEEcCCCCCCCCC----HHHHHHHHHHHHHcCCCCEEEEEcCCcHHHH
Confidence 345577777777655433222 333334444444333 24445599998643
No 229
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=28.74 E-value=1.2e+02 Score=20.19 Aligned_cols=34 Identities=6% Similarity=0.135 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHH
Q psy7473 95 DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v 128 (136)
..+.++.+.+......+.+|+++=..|.|.|-..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~vll~G~~GtGKt~la 46 (265)
T 2bjv_A 13 NSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIA 46 (265)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCCCCcHHHHH
Confidence 4566677777777777889999999999999543
No 230
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=28.45 E-value=51 Score=23.84 Aligned_cols=32 Identities=9% Similarity=0.095 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~v 128 (136)
+.++.+.++.+.+.|-++.+||.. |+++++.+
T Consensus 298 it~~~~i~~~A~~~g~~~~~~~~~es~i~~~a~~ 331 (377)
T 2pge_A 298 FHYAGQWIELARERGIGFWITSALESNLGLAAIA 331 (377)
T ss_dssp HHHHHHHHHHHHHTTCEEEEBCCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEecCCcccHHHHHHHH
Confidence 455556666666788899999973 44444433
No 231
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=28.43 E-value=67 Score=21.38 Aligned_cols=23 Identities=26% Similarity=0.212 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 98 ERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 98 ~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
+.+...++.+.+.|.+|.+||..
T Consensus 111 ~~~~~~~~~a~~~~~pv~iH~~~ 133 (265)
T 1yix_A 111 ESFIHHIQIGRELNKPVIVHTRD 133 (265)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHHHHHHHhCCCEEEEecC
Confidence 34444555555668899999963
No 232
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.42 E-value=44 Score=18.11 Aligned_cols=19 Identities=16% Similarity=0.214 Sum_probs=15.7
Q ss_pred CcEEEeCCCCcccHHHHHh
Q psy7473 31 ENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~ 49 (136)
..||+|+.|.....+.|++
T Consensus 6 ~~l~V~nLp~~~te~~l~~ 24 (88)
T 1wf0_A 6 SGVFVGRCTGDMTEDELRE 24 (88)
T ss_dssp CEEEEESCCSSSCHHHHHH
T ss_pred cEEEEeCCCCCCCHHHHHH
Confidence 4699999998888777776
No 233
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.12 E-value=67 Score=17.11 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=19.8
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
..||+|+.|.....+.|++ .....|.++
T Consensus 6 ~~l~v~nlp~~~t~~~l~~~f~~~G~i~~~ 35 (85)
T 1x4e_A 6 SGLYIRGLQPGTTDQDLVKLCQPYGKIVST 35 (85)
T ss_dssp CEEEEESCCTTCCHHHHHTTSTTTSCEEEE
T ss_pred cEEEEeCCCCCCCHHHHHHHHHhcCCeEEE
Confidence 4699999998888888776 344445444
No 234
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=28.00 E-value=41 Score=24.15 Aligned_cols=32 Identities=9% Similarity=-0.046 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~v 128 (136)
+.++.+.++.+.+.|-++.+||.. |+++++.+
T Consensus 275 it~~~~i~~~A~~~g~~~~~~~~~es~i~~~a~~ 308 (366)
T 1tkk_A 275 ISGAEKINAMAEACGVECMVGSMIETKLGITAAA 308 (366)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEecCccccHHHHHHHH
Confidence 455556666666778899999974 44454443
No 235
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=27.85 E-value=25 Score=25.37 Aligned_cols=12 Identities=25% Similarity=0.833 Sum_probs=10.0
Q ss_pred HcCCeEEEEcCC
Q psy7473 109 KTGGTVYVHCKA 120 (136)
Q Consensus 109 ~~~~~VlVHC~~ 120 (136)
..|..||.||.+
T Consensus 140 ~~g~~ILTh~~S 151 (338)
T 3a11_A 140 EDGDVIMTHCHS 151 (338)
T ss_dssp CTTCEEEECSCC
T ss_pred CCCCEEEEeCCc
Confidence 367899999986
No 236
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=27.48 E-value=47 Score=23.97 Aligned_cols=32 Identities=13% Similarity=0.018 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~v 128 (136)
+.++.+.++.+...|-++.+||.. ++++++.+
T Consensus 272 it~~~~i~~~A~~~gi~~~~~~~~es~i~~aa~~ 305 (368)
T 3q45_A 272 ITNALNIIRLAEQAHMPVQVGGFLESRLGFTAAA 305 (368)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEecCccccHHHHHHHH
Confidence 566666777777888999999974 45555444
No 237
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=27.20 E-value=78 Score=18.06 Aligned_cols=23 Identities=13% Similarity=0.444 Sum_probs=16.6
Q ss_pred ccccCcEEEeCCCCcccHHHHHh
Q psy7473 27 DRIDENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 27 ~~i~~~l~~g~~~~~~~~~~l~~ 49 (136)
......||+|+.|.....+.|.+
T Consensus 5 ~~~~~~l~V~nlp~~~t~~~l~~ 27 (115)
T 3lqv_A 5 PEVNRILYIRNLPYKITAEEMYD 27 (115)
T ss_dssp TTCCSEEEEESCCTTCCHHHHHH
T ss_pred CCCCCEEEEeCCCCCCCHHHHHH
Confidence 34455799999998777666555
No 238
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=27.13 E-value=82 Score=20.09 Aligned_cols=50 Identities=12% Similarity=-0.024 Sum_probs=25.0
Q ss_pred hhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcC--CeEEEEcCCCCChH
Q psy7473 72 EWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTG--GTVYVHCKAGRTRS 125 (136)
Q Consensus 72 ~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~--~~VlVHC~~G~~RS 125 (136)
..+..|.++..+...+.. .. ++..+...+.+...+| ..-.+=|..|+|=|
T Consensus 33 ~L~~~G~eV~D~G~~~~~-~~---dYpd~a~~va~~V~~g~~d~GIliCGTGiG~s 84 (155)
T 1o1x_A 33 YLLGKGIEVEDHGTYSEE-SV---DYPDYAKKVVQSILSNEADFGILLCGTGLGMS 84 (155)
T ss_dssp HHHHTTCEEEECCCCSSS-CC---CHHHHHHHHHHHHHTTSCSEEEEEESSSHHHH
T ss_pred HHHHCCCEEEEeCCCCCC-CC---ChHHHHHHHHHHHHcCCCceEEEEcCCcHHHH
Confidence 344567777776554322 11 2333333333444333 24445599998643
No 239
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=26.97 E-value=47 Score=17.19 Aligned_cols=18 Identities=28% Similarity=0.399 Sum_probs=13.1
Q ss_pred cEEEeCCCCcccHHHHHh
Q psy7473 32 NIILGALPFKRLTNKLLE 49 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~ 49 (136)
.||+|+.|.....+.|++
T Consensus 1 ~l~v~nLp~~~t~~~l~~ 18 (75)
T 1iqt_A 1 KIFVGGLSPDTPEEKIRE 18 (75)
T ss_dssp CEEESCCCSSCCHHHHHH
T ss_pred CEEEeCCCCCCCHHHHHH
Confidence 489999988776665544
No 240
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=26.95 E-value=54 Score=23.57 Aligned_cols=31 Identities=23% Similarity=0.101 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSAT 127 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~ 127 (136)
+.++.+.++.+.+.|-++.+||.. |++++++
T Consensus 276 it~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~ 308 (371)
T 2ps2_A 276 LTRGRRQRDICLAAGYSVSVQETCGSDIAFAAI 308 (371)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEecCCCcCHHHHHHH
Confidence 456666666677788999999975 3444433
No 241
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=26.93 E-value=57 Score=23.54 Aligned_cols=47 Identities=13% Similarity=0.023 Sum_probs=28.5
Q ss_pred CCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHHH
Q psy7473 77 GVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCK--AGRTRSATLV 129 (136)
Q Consensus 77 ~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v~ 129 (136)
...++.+.....+ -+.++.+.++.+.+.|-++.+||. .|+++++.+.
T Consensus 260 ~~d~v~ik~~~~G------Git~~~~i~~~A~~~g~~~~~~~~~es~i~~~a~~~ 308 (379)
T 2rdx_A 260 GAEICCLKISNLG------GLSKARRTRDFLIDNRMPVVAEDSWGGEIASAAVAH 308 (379)
T ss_dssp CCSEEEEETTTTT------SHHHHHHHHHHHHHTTCCEEEECSBCSHHHHHHHHH
T ss_pred CCCEEEEeccccC------CHHHHHHHHHHHHHcCCeEEEeeccCcHHHHHHHHH
Confidence 3455555444432 256666666677788899999985 3444554433
No 242
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=26.79 E-value=1.2e+02 Score=20.39 Aligned_cols=28 Identities=14% Similarity=0.024 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCCCC
Q psy7473 95 DKLERGVDFIQRISKTGGTVYVHCKAGRT 123 (136)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~VlVHC~~G~~ 123 (136)
+.++++++.+.+... +-.++|||.+|.+
T Consensus 91 ~~v~~~~~~~~~~~g-~iD~li~naag~~ 118 (286)
T 1xu9_A 91 TFAEQFVAQAGKLMG-GLDMLILNHITNT 118 (286)
T ss_dssp HHHHHHHHHHHHHHT-SCSEEEECCCCCC
T ss_pred HHHHHHHHHHHHHcC-CCCEEEECCccCC
Confidence 455665555544332 3479999977764
No 243
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=26.75 E-value=1.6e+02 Score=20.33 Aligned_cols=20 Identities=20% Similarity=0.189 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHcCCeEEE
Q psy7473 97 LERGVDFIQRISKTGGTVYV 116 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlV 116 (136)
++.+-++|+.+.+.|=.|++
T Consensus 81 ~~~~d~~v~~a~~~Gi~vil 100 (320)
T 3nco_A 81 LDRVKHVVDVALKNDLVVII 100 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEE
Confidence 44444444445555544444
No 244
>2e5g_A U6 snRNA-specific terminal uridylyltransferase 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.73 E-value=64 Score=17.71 Aligned_cols=28 Identities=18% Similarity=0.207 Sum_probs=19.4
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
..||+|+.|.....+.|++ .....|.++
T Consensus 9 ~~l~V~nl~~~~t~~~l~~~F~~~G~v~~v 38 (94)
T 2e5g_A 9 RSVFVSGFPRGVDSAQLSEYFLAFGPVASV 38 (94)
T ss_dssp CEEEEECCCTTCCHHHHHHHGGGTSCEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCCeEEE
Confidence 3699999998887777766 334445554
No 245
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.61 E-value=93 Score=17.77 Aligned_cols=30 Identities=20% Similarity=0.338 Sum_probs=19.6
Q ss_pred cCcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 30 DENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
...||++++|.....+.|++ ..+..|.++.
T Consensus 17 ~~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~ 48 (116)
T 2cqd_A 17 FTKIFVGGLPYHTTDASLRKYFEGFGDIEEAV 48 (116)
T ss_dssp SSEEEEECCCSSCCHHHHHHHHHTTSCEEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhCCCeeEEE
Confidence 34699999998877776655 3444454443
No 246
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=26.54 E-value=1.2e+02 Score=20.45 Aligned_cols=64 Identities=11% Similarity=0.050 Sum_probs=32.4
Q ss_pred HHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCC
Q psy7473 45 NKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAG 121 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G 121 (136)
..|.+.|.+.++.-+.... .+........++...+. ..+.++++++.+.+... +=.++|||.+.
T Consensus 34 ~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~Dv~------d~~~v~~~~~~~~~~~g-~iD~lvnnAg~ 97 (266)
T 3p19_A 34 RRFSEEGHPLLLLARRVER------LKALNLPNTLCAQVDVT------DKYTFDTAITRAEKIYG-PADAIVNNAGM 97 (266)
T ss_dssp HHHHHTTCCEEEEESCHHH------HHTTCCTTEEEEECCTT------CHHHHHHHHHHHHHHHC-SEEEEEECCCC
T ss_pred HHHHHCCCEEEEEECCHHH------HHHhhcCCceEEEecCC------CHHHHHHHHHHHHHHCC-CCCEEEECCCc
Confidence 4577789887775544322 11111223333333222 23456666655544331 23789999753
No 247
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.51 E-value=78 Score=17.62 Aligned_cols=28 Identities=14% Similarity=0.051 Sum_probs=19.5
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
..||+++.|.....+.|++ ..+..|.++
T Consensus 16 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v 45 (103)
T 2d9p_A 16 VNLYVKNLDDGIDDERLRKAFSPFGTITSA 45 (103)
T ss_dssp CCEEEECCCTTCCHHHHHHTTTTTSCEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCEEEE
Confidence 4699999998887777776 334345443
No 248
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.50 E-value=68 Score=17.39 Aligned_cols=19 Identities=16% Similarity=0.389 Sum_probs=14.8
Q ss_pred CcEEEeCCCCcccHHHHHh
Q psy7473 31 ENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~ 49 (136)
..||+|+.|.....+.|++
T Consensus 9 ~~l~V~nlp~~~t~~~l~~ 27 (90)
T 2dnq_A 9 VKLFIGNLPREATEQEIRS 27 (90)
T ss_dssp EEEEEESCCSSCCHHHHHH
T ss_pred eEEEEeCCCCCCCHHHHHH
Confidence 3699999998877776655
No 249
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.50 E-value=87 Score=17.24 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=20.0
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+|+.|.....+.|++ .....|.++.
T Consensus 11 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~ 41 (99)
T 2dgs_A 11 NKIFVGGIPHNCGETELREYFKKFGVVTEVV 41 (99)
T ss_dssp CEEEEESCCSSCCHHHHHHHHSSSSCEEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCeEEEE
Confidence 4699999998877777766 4444555443
No 250
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=26.23 E-value=70 Score=17.64 Aligned_cols=28 Identities=11% Similarity=0.191 Sum_probs=19.2
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
..||+++.|.....+.|++ .....|.++
T Consensus 18 ~~l~V~nlp~~~t~~~l~~~F~~~G~v~~v 47 (97)
T 1why_A 18 TRLWVGGLGPNTSLAALAREFDRFGSIRTI 47 (97)
T ss_dssp SCEEEECCCSSCCHHHHHHHHHTTSCEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCeeEE
Confidence 4699999998877776665 344445554
No 251
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=26.10 E-value=1.5e+02 Score=21.88 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCCC---CChHHHHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKAG---RTRSATLVGC 131 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~G---~~RS~~v~~a 131 (136)
+.++.+.++.+...|-++.+||..| ++.++.++++
T Consensus 348 ite~~~i~~~A~~~g~~~~~~h~~get~~~~~a~la~a 385 (431)
T 2fym_A 348 LTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVG 385 (431)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEEeCCCCCchHHHHHHHHHh
Confidence 4666666666777888999987654 6655555544
No 252
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=26.06 E-value=57 Score=23.74 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK--AGRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v 128 (136)
+.++.+..+.+...|-++.+||. .++++++++
T Consensus 276 i~~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~ 309 (379)
T 3r0u_A 276 ILEAQKIKKLADSAGISCMVGCMMESPAGILATA 309 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCccHHHHHHHH
Confidence 45556666666778889999997 445555443
No 253
>1zo0_A ODC-AZ, ornithine decarboxylase antizyme; ornithine decarboxylase inhibitor, lyase inhibitor; NMR {Rattus norvegicus} SCOP: d.108.1.7
Probab=25.69 E-value=1.2e+02 Score=18.59 Aligned_cols=51 Identities=16% Similarity=0.229 Sum_probs=36.8
Q ss_pred CCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHH
Q psy7473 77 GVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 77 ~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v 128 (136)
+.-|+.+|-.-.. ..+.+.|-..++|.++.++-.+-+++-=+...+|.+.+
T Consensus 44 ~~Lyv~iP~~~~~-~gsKe~fv~LLEfAEe~L~~~~V~v~f~K~r~dr~~l~ 94 (126)
T 1zo0_A 44 GGLYIELPAGPLP-EGSKDSFAALLEFAEEQLRADHVFICFPKNREDRAALL 94 (126)
T ss_dssp TEEEEECSSCCCS-SCCSHHHHHHHHHHHHHHCCCCEEEEECCCSSCHHHHH
T ss_pred CeEEEEcCCcccc-ccchHHHHHHHHHHHHhcCCCEEEEEEecCCcchHhhh
Confidence 4456777765544 56889999999999999887666666667777785443
No 254
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.66 E-value=59 Score=18.52 Aligned_cols=20 Identities=15% Similarity=0.333 Sum_probs=15.7
Q ss_pred cCcEEEeCCCCcccHHHHHh
Q psy7473 30 DENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~ 49 (136)
.-.||++++|.....+.|++
T Consensus 15 ~~~l~V~nLp~~~t~~~l~~ 34 (108)
T 1x4c_A 15 ENRVVVSGLPPSGSWQDLKD 34 (108)
T ss_dssp CCEEEEESCCSSCCHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHH
Confidence 34699999998877777665
No 255
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.64 E-value=83 Score=17.10 Aligned_cols=29 Identities=17% Similarity=0.265 Sum_probs=19.3
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+++.|.....+.|++ .....|.++.
T Consensus 6 ~~l~v~nlp~~~t~~~l~~~f~~~G~v~~v~ 36 (95)
T 2dnz_A 6 SGLYVGSLHFNITEDMLRGIFEPFGKIDNIV 36 (95)
T ss_dssp CEEEEESCCTTCCHHHHHHHHTTTSCEEEEE
T ss_pred cEEEEeCCCCCCCHHHHHHHHHhcCCEeEEE
Confidence 4699999998877776665 3444455443
No 256
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=25.60 E-value=1.5e+02 Score=19.55 Aligned_cols=50 Identities=12% Similarity=0.243 Sum_probs=31.9
Q ss_pred CeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHH
Q psy7473 78 VEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 78 i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
++.+-+.+++.- -+....+.+..+.|+++.++|.+|.+ |++.-+|+..-+
T Consensus 6 ~kli~~DlDGTL-l~~~~~~~~~~~ai~~l~~~Gi~v~l-aTgrs~r~~~~~ 55 (266)
T 3pdw_A 6 YKGYLIDLDGTM-YNGTEKIEEACEFVRTLKDRGVPYLF-VTNNSSRTPKQV 55 (266)
T ss_dssp CSEEEEECSSST-TCHHHHHHHHHHHHHHHHHTTCCEEE-EESCCSSCHHHH
T ss_pred CCEEEEeCcCce-EeCCEeCccHHHHHHHHHHCCCeEEE-EeCCCCCCHHHH
Confidence 445556666654 34455677889999999888877766 544334554333
No 257
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.56 E-value=94 Score=17.73 Aligned_cols=29 Identities=10% Similarity=0.142 Sum_probs=20.9
Q ss_pred cCcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 30 DENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
...||+|+.|.....+.|++ .....|.++
T Consensus 15 ~~~l~V~nLp~~~te~~L~~~F~~fG~v~~v 45 (101)
T 2cq1_A 15 SRVLHIRKLPGEVTETEVIALGLPFGKVTNI 45 (101)
T ss_dssp CSEEEEESCCTTCCHHHHHHTTTTTSCEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCEEEE
Confidence 34699999998877777776 445555554
No 258
>2hzc_A Splicing factor U2AF 65 kDa subunit; RNA splicing, RRM, RNA recognition, alternative conformation binding protein; HET: P6G; 1.47A {Homo sapiens} PDB: 1u2f_A
Probab=25.55 E-value=60 Score=17.35 Aligned_cols=20 Identities=15% Similarity=0.532 Sum_probs=14.5
Q ss_pred cCcEEEeCCCCcccHHHHHh
Q psy7473 30 DENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~ 49 (136)
...||+|+.|.....+.|++
T Consensus 6 ~~~l~V~nLp~~~t~~~l~~ 25 (87)
T 2hzc_A 6 ARRLYVGNIPFGITEEAMMD 25 (87)
T ss_dssp GGEEEEESCCTTCCHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHH
Confidence 44699999988776665543
No 259
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=25.50 E-value=82 Score=17.57 Aligned_cols=30 Identities=13% Similarity=0.247 Sum_probs=19.6
Q ss_pred cCcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 30 DENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
...||+|++|.....+.|++ .....|.++.
T Consensus 15 ~~~l~v~nLp~~~t~~~l~~~F~~~G~i~~v~ 46 (105)
T 2dnh_A 15 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECT 46 (105)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHTTTSCEEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCeEEEE
Confidence 34699999998877776665 3333454443
No 260
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=25.48 E-value=51 Score=23.95 Aligned_cols=33 Identities=12% Similarity=-0.019 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK--AGRTRSATLV 129 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v~ 129 (136)
+.++.+.++.+...|-++.+||. .|+++++++-
T Consensus 282 it~~~~i~~~A~~~gi~~~~~~~~es~ig~aa~~h 316 (382)
T 3dgb_A 282 PRATLRTAAIAEAAGIGLYGGTMLEGGIGTLASAH 316 (382)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEeecCCCccHHHHHHHHH
Confidence 45555555556677889999996 4566655543
No 261
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=25.44 E-value=2e+02 Score=21.33 Aligned_cols=67 Identities=12% Similarity=0.072 Sum_probs=32.5
Q ss_pred HHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 45 NKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
..|.+.|.+.++.-..... ....+.....+..++...+.|. +.++++++.+.+.....=.++|||.+
T Consensus 231 ~~La~~Ga~Vvl~~r~~~~---~~l~~~~~~~~~~~~~~Dvtd~------~~v~~~~~~~~~~~g~~id~lV~nAG 297 (454)
T 3u0b_A 231 EVFARDGATVVAIDVDGAA---EDLKRVADKVGGTALTLDVTAD------DAVDKITAHVTEHHGGKVDILVNNAG 297 (454)
T ss_dssp HHHHHTTCEEEEEECGGGH---HHHHHHHHHHTCEEEECCTTST------THHHHHHHHHHHHSTTCCSEEEECCC
T ss_pred HHHHHCCCEEEEEeCCccH---HHHHHHHHHcCCeEEEEecCCH------HHHHHHHHHHHHHcCCCceEEEECCc
Confidence 4577788875554332211 0011222334566655544442 24555555554432111369999964
No 262
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.39 E-value=1e+02 Score=17.56 Aligned_cols=28 Identities=14% Similarity=0.112 Sum_probs=19.2
Q ss_pred cEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 32 NIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
.||+|+++.....+.|++ ..+..|.++.
T Consensus 27 ~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~ 56 (114)
T 2cq4_A 27 TVFCMQLAARIRPRDLEDFFSAVGKVRDVR 56 (114)
T ss_dssp EEEEESCCTTCCHHHHHHHHTTTSCEEEEE
T ss_pred EEEEeCCCCCCCHHHHHHHHHhCCCEeEEE
Confidence 699999998877776665 4444555443
No 263
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.35 E-value=97 Score=17.40 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=19.1
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||++++|.....+.|++ .....|.++.
T Consensus 16 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~ 46 (111)
T 1x4h_A 16 KTVFIRNLSFDSEEEALGEVLQQFGDLKYVR 46 (111)
T ss_dssp CCEEEESCCTTCCHHHHHHHHHTTSCEEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCCeEEEE
Confidence 3699999998877766655 3333454443
No 264
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=25.33 E-value=64 Score=23.59 Aligned_cols=31 Identities=10% Similarity=-0.104 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSAT 127 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~ 127 (136)
+.++.+.++.+...|-++.+||.. |++++++
T Consensus 295 it~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~ 327 (391)
T 4e8g_A 295 LQQMAAFRDICEARALPHSCDDAWGGDIIAAAC 327 (391)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECSSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEeCCcCCCHHHHHHH
Confidence 466666666677888999999974 4555543
No 265
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=25.27 E-value=1.5e+02 Score=20.98 Aligned_cols=72 Identities=6% Similarity=-0.008 Sum_probs=36.6
Q ss_pred HHHhcCCCEEEEcccCcccccccChhhhhhcCCeE--EEeeCCCC-----CCCchHHH-HHHHHHHHHHHHHcCCeEEEE
Q psy7473 46 KLLEENVKGVVSMNEDYELYFANGREEWNKVGVEF--LQLSTRDI-----FDTPDQDK-LERGVDFIQRISKTGGTVYVH 117 (136)
Q Consensus 46 ~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~--~~~p~~D~-----~~~~~~~~-~~~~~~~i~~~~~~~~~VlVH 117 (136)
..++.|+.+++.+.++.+ .......|-.+ .|.|+.-. ..+.+.+. .+.+-+..+.+.+-+..|+|-
T Consensus 158 ~A~~~gL~Ti~~v~~~ee------A~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivL 231 (286)
T 2p10_A 158 EAHKLDLLTTPYVFSPED------AVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIIL 231 (286)
T ss_dssp HHHHTTCEECCEECSHHH------HHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEE
T ss_pred HHHHCCCeEEEecCCHHH------HHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEE
Confidence 456689999998877655 33334444444 44553211 12223333 222223333333444568888
Q ss_pred cCC-CCC
Q psy7473 118 CKA-GRT 123 (136)
Q Consensus 118 C~~-G~~ 123 (136)
|.+ |++
T Consensus 232 c~gGpIs 238 (286)
T 2p10_A 232 SHGGPIA 238 (286)
T ss_dssp EESTTCC
T ss_pred ecCCCCC
Confidence 988 553
No 266
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=25.23 E-value=1e+02 Score=17.56 Aligned_cols=29 Identities=17% Similarity=0.237 Sum_probs=19.7
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+|+.+.....+.|++ ..+..|.++.
T Consensus 26 ~~lfV~nLp~~~te~~L~~~F~~~G~i~~v~ 56 (109)
T 2rs2_A 26 CKMFIGGLSWQTTQEGLREYFGQFGEVKECL 56 (109)
T ss_dssp CCEEEESCCTTCCHHHHHHHHTTTSCEEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHccCCeEEEE
Confidence 3699999998877777665 4444555443
No 267
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.13 E-value=75 Score=17.47 Aligned_cols=28 Identities=18% Similarity=0.275 Sum_probs=18.4
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
..||+|+.|.....+.|++ ..+..|.++
T Consensus 6 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v 35 (98)
T 2cpf_A 6 SGLFIKNLNFSTTEETLKGVFSKVGAIKSC 35 (98)
T ss_dssp CCEEEESCCTTCCHHHHHHHHHTTSCEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCeEEE
Confidence 3699999998777766655 334344444
No 268
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=25.06 E-value=64 Score=20.86 Aligned_cols=49 Identities=16% Similarity=0.129 Sum_probs=21.9
Q ss_pred hhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcC--CeEEEEcCCCCChH
Q psy7473 73 WNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTG--GTVYVHCKAGRTRS 125 (136)
Q Consensus 73 ~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~--~~VlVHC~~G~~RS 125 (136)
.+..|.++..+...+.... ++..+...+.+....| ..-++=|..|+|=|
T Consensus 43 L~~~G~eV~D~G~~~~~~~----dYPd~a~~va~~V~~g~~d~GIliCGTGiG~s 93 (166)
T 3s5p_A 43 ASAHGYEVMDLGTESDASV----DYPDFAKIGCEAVTSGRADCCILVCGTGIGIS 93 (166)
T ss_dssp HHHTTCEEEEEEC------------CHHHHHHHHHHHTTSCSEEEEEESSSHHHH
T ss_pred HHHCCCEEEEcCCCCCCCC----CHHHHHHHHHHHHHcCCCcEEEEEcCCcHHHH
Confidence 3456777776665442211 1333333333444333 24445599998644
No 269
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=24.97 E-value=1.2e+02 Score=21.34 Aligned_cols=81 Identities=12% Similarity=0.169 Sum_probs=45.9
Q ss_pred HHHHhcCCCEEEEcccCccc---------ccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEE
Q psy7473 45 NKLLEENVKGVVSMNEDYEL---------YFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVY 115 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~~~---------~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~Vl 115 (136)
+..++.|.....+++..... ......+.....|...+.++ |....-.+..+.+.++.+.+.. .+-++-
T Consensus 129 ~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~--DT~G~~~P~~v~~lv~~l~~~~-~~~~l~ 205 (307)
T 1ydo_A 129 NDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG--DTIGAANPAQVETVLEALLARF-PANQIA 205 (307)
T ss_dssp HHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE--CSSCCCCHHHHHHHHHHHHTTS-CGGGEE
T ss_pred HHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc--CCCCCcCHHHHHHHHHHHHHhC-CCCeEE
Confidence 34677898876665542110 00001122345677766555 6555666777888887776654 235899
Q ss_pred EEcC--CCCChHHHH
Q psy7473 116 VHCK--AGRTRSATL 128 (136)
Q Consensus 116 VHC~--~G~~RS~~v 128 (136)
+||. .|.+=+-++
T Consensus 206 ~H~Hnd~Gla~AN~l 220 (307)
T 1ydo_A 206 LHFHDTRGTALANMV 220 (307)
T ss_dssp EECBGGGSCHHHHHH
T ss_pred EEECCCCchHHHHHH
Confidence 9995 455444333
No 270
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=24.84 E-value=1.1e+02 Score=21.01 Aligned_cols=20 Identities=10% Similarity=-0.104 Sum_probs=13.8
Q ss_pred HHHHHHHHHHcCCeEEEEcC
Q psy7473 100 GVDFIQRISKTGGTVYVHCK 119 (136)
Q Consensus 100 ~~~~i~~~~~~~~~VlVHC~ 119 (136)
+...++.+.+.|.+|.+||.
T Consensus 153 ~~~~~~lA~~~~~pv~iH~~ 172 (314)
T 2vc7_A 153 IRAAAIANKETKVPIITHSN 172 (314)
T ss_dssp HHHHHHHHHHHCCCEEEECC
T ss_pred HHHHHHHHHHHCCEEEEeCC
Confidence 33445555566899999995
No 271
>1wg1_A KIAA1579 protein, homolog EXC-7; RBD, structural genomics, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wi6_A
Probab=24.71 E-value=58 Score=17.66 Aligned_cols=19 Identities=16% Similarity=0.319 Sum_probs=15.9
Q ss_pred CcEEEeCCCCcccHHHHHh
Q psy7473 31 ENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~ 49 (136)
-.||+|+.|.....+.|++
T Consensus 6 ~~l~V~nLp~~~t~~~l~~ 24 (88)
T 1wg1_A 6 SGILVKNLPQDSNCQEVHD 24 (88)
T ss_dssp CCEEEESCCSSCCHHHHHH
T ss_pred CEEEEeCCCCCCCHHHHHH
Confidence 3699999998888888776
No 272
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=24.60 E-value=1.5e+02 Score=21.35 Aligned_cols=44 Identities=9% Similarity=0.083 Sum_probs=23.6
Q ss_pred hhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcC
Q psy7473 71 EEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCK 119 (136)
Q Consensus 71 ~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~ 119 (136)
...+..|+.+.++. . .+..+....+-+.++.+.+.++|++|||.
T Consensus 223 ~~a~a~G~~~~~Vd--g---~d~~av~~a~~~A~~~a~~~~gP~lIe~~ 266 (367)
T 1umd_A 223 DKAHAFGIPGYLVD--G---MDVLASYYVVKEAVERARRGEGPSLVELR 266 (367)
T ss_dssp GGGGGTTSCEEEEE--T---TCHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHcCCcEEEeC--C---CCHHHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 34455678777542 2 22222222222334455556789999984
No 273
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=24.29 E-value=39 Score=24.66 Aligned_cols=32 Identities=13% Similarity=-0.024 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC-CCCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK-AGRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~-~G~~RS~~v 128 (136)
+.++.+..+.+...|-++.+||. .|+++++++
T Consensus 284 it~~~~ia~~A~~~gi~~~~h~~~~~i~~aa~~ 316 (389)
T 3ozy_A 284 ITEALAISASAASAHLAWNPHTFNDIITVAANL 316 (389)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEecCCCcHHHHHHHH
Confidence 45556666666778889999996 344454433
No 274
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=24.25 E-value=1.2e+02 Score=18.18 Aligned_cols=29 Identities=17% Similarity=0.339 Sum_probs=19.9
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+|+.|.....+.|++ .....|.++.
T Consensus 4 ~~l~v~nLp~~~t~~~l~~~F~~~G~i~~v~ 34 (167)
T 2cjk_A 4 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLK 34 (167)
T ss_dssp GEEEECSCCTTCCHHHHHHHHTTTCCEEEEE
T ss_pred cEEEEeCCCCCCCHHHHHHHHHhCCCEEEEE
Confidence 3699999998877777666 3444555543
No 275
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=24.24 E-value=63 Score=19.45 Aligned_cols=37 Identities=22% Similarity=0.269 Sum_probs=20.6
Q ss_pred HHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEE
Q psy7473 45 NKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFL 81 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~ 81 (136)
..+++.|++.|+-.....+.......++++.+|+...
T Consensus 20 reikrqgvrvvllysdqdekrrrerleefekqgvdvr 56 (162)
T 2l82_A 20 REIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVR 56 (162)
T ss_dssp HHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCCcee
Confidence 3567788888776665544311122345556666553
No 276
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=24.14 E-value=89 Score=18.02 Aligned_cols=28 Identities=11% Similarity=0.057 Sum_probs=20.3
Q ss_pred cEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 32 NIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
.||+|+.+...+.+.|++ ..+..|.++.
T Consensus 8 ~lfV~nL~~~~te~~L~~~F~~~G~i~~v~ 37 (110)
T 3s8s_A 8 EVTFARLNDNVRETFLKDMCRKYGEVEEVE 37 (110)
T ss_dssp EEEEESCCTTCCHHHHHHHHTTTSCEEEEE
T ss_pred EEEEECCCCCCCHHHHHHHHHhcCCeeEEE
Confidence 699999998888777776 4555555543
No 277
>2cqh_A IGF-II mRNA-binding protein 2 isoform A; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.10 E-value=59 Score=17.77 Aligned_cols=19 Identities=16% Similarity=0.293 Sum_probs=14.5
Q ss_pred CcEEEeCCCCcccHHHHHh
Q psy7473 31 ENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~ 49 (136)
..||+|+.|.....+.|++
T Consensus 9 ~~l~V~nLp~~~t~~~l~~ 27 (93)
T 2cqh_A 9 NKLYIGNLSPAVTADDLRQ 27 (93)
T ss_dssp CCEEEECCCTTCCHHHHHH
T ss_pred cEEEEeCCCCCCCHHHHHH
Confidence 4699999998877666554
No 278
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=24.07 E-value=59 Score=23.92 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCCCCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v 128 (136)
+.++.+..+.+...|-++.+||..+++.++++
T Consensus 302 it~~~~ia~~A~~~gi~~~~h~~s~i~~aa~~ 333 (410)
T 3dip_A 302 LSEGRKIAALAETHARPLAPHXTGPVALMAGL 333 (410)
T ss_dssp HHHHHHHHHHHHHTTCCEEECSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEeeeCccHHHHHHHH
Confidence 45555666666678889999987555554443
No 279
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=23.96 E-value=2e+02 Score=20.47 Aligned_cols=42 Identities=19% Similarity=0.243 Sum_probs=29.6
Q ss_pred HHHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEee-CCCCC
Q psy7473 45 NKLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLS-TRDIF 89 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p-~~D~~ 89 (136)
+.|+++||..++-+..+... .......+.++..+.+| ..|.+
T Consensus 87 ~~l~~~~Id~L~~IGGdgS~---~~a~~l~~~~i~vigiPkTIDND 129 (319)
T 4a3s_A 87 ANLKKLGIEGLVVIGGDGSY---MGAKKLTEHGFPCVGVPGTIDND 129 (319)
T ss_dssp HHHHHHTCCEEEEEECTTHH---HHHHHHHHTTCCEEEEEEETTCC
T ss_pred HHHHHcCCCEEEEeCCcHHH---HHHHHHhccCCcEEEeeccccCC
Confidence 45888999999999988753 11233456789999999 44443
No 280
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=23.86 E-value=81 Score=16.77 Aligned_cols=29 Identities=10% Similarity=0.266 Sum_probs=18.8
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+|+.|.....+.|++ .....|.++.
T Consensus 5 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~~~ 35 (88)
T 4a8x_A 5 TKVHIGRLTRNVTKDHIMEIFSTYGKIKMID 35 (88)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHTTSCEEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhCCCEEEEE
Confidence 3599999998877766655 3344454433
No 281
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=23.83 E-value=69 Score=17.07 Aligned_cols=18 Identities=17% Similarity=0.278 Sum_probs=14.1
Q ss_pred cEEEeCCCCcccHHHHHh
Q psy7473 32 NIILGALPFKRLTNKLLE 49 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~ 49 (136)
.||+|+.|.....+.|++
T Consensus 8 ~l~v~nlp~~~t~~~l~~ 25 (87)
T 3bs9_A 8 HVFVGDLSPEITTAAIAA 25 (87)
T ss_dssp EEEEESCCTTCCHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHH
Confidence 599999998777666655
No 282
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=23.75 E-value=91 Score=17.42 Aligned_cols=29 Identities=24% Similarity=0.383 Sum_probs=17.3
Q ss_pred CcEEEeCCCC------cccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPF------KRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~------~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+|+.|. ....+.|++ .....|.++.
T Consensus 7 ~~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~ 43 (100)
T 3ns6_A 7 QYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNME 43 (100)
T ss_dssp GEEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEE
T ss_pred cEEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEE
Confidence 4599999998 544444444 3334555443
No 283
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=23.75 E-value=92 Score=22.54 Aligned_cols=21 Identities=10% Similarity=-0.083 Sum_probs=14.6
Q ss_pred HcCCeEEEEc-CCCCChHHHHHH
Q psy7473 109 KTGGTVYVHC-KAGRTRSATLVG 130 (136)
Q Consensus 109 ~~~~~VlVHC-~~G~~RS~~v~~ 130 (136)
..+.+|+|+| ..| .||+.-++
T Consensus 93 ~~d~~VVvYc~~~G-~rsa~ra~ 114 (373)
T 1okg_A 93 AGELPVLCYDDECG-AMGGCRLW 114 (373)
T ss_dssp SSSSCEEEECSSTT-TTTHHHHH
T ss_pred CCCCeEEEEeCCCC-chHHHHHH
Confidence 4668999999 666 47764443
No 284
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=23.67 E-value=90 Score=20.99 Aligned_cols=23 Identities=13% Similarity=0.066 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 98 ERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 98 ~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
+.+...++.+.+.|.+|.+||..
T Consensus 138 ~~~~~~~~~a~~~~~pv~iH~~~ 160 (291)
T 1bf6_A 138 KVFIAAALAHNQTGRPISTHTSF 160 (291)
T ss_dssp HHHHHHHHHHHHHCCCEEEECGG
T ss_pred HHHHHHHHHHHHHCCeEEEeCCC
Confidence 33344555555668999999954
No 285
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.66 E-value=51 Score=17.15 Aligned_cols=18 Identities=22% Similarity=0.508 Sum_probs=13.5
Q ss_pred cEEEeCCCCcccHHHHHh
Q psy7473 32 NIILGALPFKRLTNKLLE 49 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~ 49 (136)
.||+|+.|.....+.|++
T Consensus 2 ~l~v~nlp~~~t~~~l~~ 19 (77)
T 1uaw_A 2 KMFIGGLSWQTTQEGLRE 19 (77)
T ss_dssp CEEEESCCSSCCSHHHHH
T ss_pred EEEEeCCCCCCCHHHHHH
Confidence 589999988776666554
No 286
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.59 E-value=91 Score=17.19 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=19.1
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+++.|.....+.|++ .....|.++.
T Consensus 18 ~~l~v~nlp~~~t~~~l~~~F~~~G~i~~v~ 48 (100)
T 2do4_A 18 HKLFISGLPFSCTKEELEEICKAHGTVKDLR 48 (100)
T ss_dssp SCEEEESCCTTCCHHHHHHHHTTTSCEEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhCCCeEEEE
Confidence 3599999998877776665 3344454443
No 287
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=23.56 E-value=1.1e+02 Score=22.53 Aligned_cols=28 Identities=7% Similarity=0.096 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCCCCCh
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKAGRTR 124 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~G~~R 124 (136)
+.++.+..+.+...|-+|.+||..+.|-
T Consensus 309 ite~~~ia~~A~~~gi~v~~h~~~~~s~ 336 (421)
T 4hnl_A 309 ITPALKLAHFCDAMGVRIAWHTPSDISP 336 (421)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCCSSSCH
T ss_pred HHHHHHHHHHHHHCCCeEEEeCCcchhH
Confidence 5677777777778899999999875543
No 288
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.54 E-value=1e+02 Score=17.09 Aligned_cols=29 Identities=24% Similarity=0.205 Sum_probs=19.3
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+|++|.....+.|++ ..+..|.++.
T Consensus 16 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~ 46 (105)
T 1x5u_A 16 ATVYVGGLDEKVSEPLLWELFLQAGPVVNTH 46 (105)
T ss_dssp TEEEEECCCTTCCHHHHHHHHHTTSCEEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCeEEEE
Confidence 4699999998877766655 3444555543
No 289
>2do0_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RNA recognition motif, RRM, RNA binding domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.40 E-value=95 Score=17.59 Aligned_cols=29 Identities=24% Similarity=0.205 Sum_probs=20.0
Q ss_pred cCcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 30 DENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
...||+++++.....+.|++ .....|.++
T Consensus 15 ~~~l~V~nlp~~~~~~~l~~~f~~~G~i~~~ 45 (114)
T 2do0_A 15 GSTVFVANLDYKVGWKKLKEVFSMAGVVVRA 45 (114)
T ss_dssp CSCEEEESCCTTCCHHHHHHHHTTTSCEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCeEEE
Confidence 45799999998877777666 344455544
No 290
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=23.27 E-value=1.1e+02 Score=17.41 Aligned_cols=29 Identities=21% Similarity=0.195 Sum_probs=20.8
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+++.+.....+.|++ .....|.++.
T Consensus 41 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~~~ 71 (118)
T 2khc_A 41 CNLFIYHLPQEFTDTDLASTFLPFGNVISAK 71 (118)
T ss_dssp EEEEEECSCTTCCHHHHHHHTTTSCEEEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCEEEEE
Confidence 3599999998887777776 4455565543
No 291
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=23.14 E-value=79 Score=23.00 Aligned_cols=32 Identities=13% Similarity=-0.009 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~v 128 (136)
+.++.+.++.+...|-++.+||.. |+++++++
T Consensus 280 it~~~~i~~~A~~~gi~~~~~~~~es~i~~aa~~ 313 (386)
T 3fv9_G 280 ITPMLRQRAIAAAAGMVMSVQDTVGSQISFAAIL 313 (386)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEeCCCCCCHHHHHHHH
Confidence 456666666677788999999974 45555544
No 292
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=22.83 E-value=82 Score=22.82 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~v 128 (136)
+.++.+..+.+...|-++.+||.. |+++++++
T Consensus 274 it~~~~ia~~A~~~g~~~~~~~~~es~i~~aa~~ 307 (378)
T 3eez_A 274 LTRAARMRDIALTHGIDMFVMATGGSVLADAEAL 307 (378)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCCCCCHHHHHHHH
Confidence 455666666677788999999974 45555443
No 293
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=22.76 E-value=1.8e+02 Score=20.84 Aligned_cols=76 Identities=11% Similarity=0.209 Sum_probs=43.6
Q ss_pred HHHHhcCCCEEEEcccCccc----------ccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeE
Q psy7473 45 NKLLEENVKGVVSMNEDYEL----------YFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTV 114 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~~~----------~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~V 114 (136)
+.+++.|++--|=....... +.....+.+.+-|+.|+.+...........+...++.+.| .+.+.+|
T Consensus 81 ~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~~~~~~~~~y~~~~~al---~~~~~~i 157 (362)
T 1uas_A 81 DYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAM---KTYGKNI 157 (362)
T ss_dssp HHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCCTTCCHHHHHHHHHHHH---HHHCTTS
T ss_pred HHHHHCCCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEEECccCCCCCCHHHHHHHHHHHH---HhhCCCc
Confidence 35667888877755443211 0011123456789999998876654333334444433333 3456778
Q ss_pred EEE-cCCCCC
Q psy7473 115 YVH-CKAGRT 123 (136)
Q Consensus 115 lVH-C~~G~~ 123 (136)
+++ |..|-.
T Consensus 158 ~~~~c~~g~~ 167 (362)
T 1uas_A 158 FFSLCEWGKE 167 (362)
T ss_dssp EEEEESTTTT
T ss_pred EEEecCCCCC
Confidence 887 987744
No 294
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=22.70 E-value=83 Score=16.97 Aligned_cols=19 Identities=26% Similarity=0.322 Sum_probs=14.6
Q ss_pred CcEEEeCCCCcccHHHHHh
Q psy7473 31 ENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~ 49 (136)
..||+++.|.....+.|++
T Consensus 9 ~~l~V~nlp~~~t~~~l~~ 27 (92)
T 2dgv_A 9 CQIFVRNLPFDFTWKMLKD 27 (92)
T ss_dssp CEEEECSCCTTCCHHHHHH
T ss_pred cEEEEeCCCCCCCHHHHHH
Confidence 4699999998777666655
No 295
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=22.60 E-value=1e+02 Score=19.77 Aligned_cols=24 Identities=21% Similarity=0.261 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEcC
Q psy7473 96 KLERGVDFIQRISKTGGTVYVHCK 119 (136)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~VlVHC~ 119 (136)
.++++.+.+.++...+|.|+++..
T Consensus 23 ~I~~AA~llaqai~~~g~IyvfG~ 46 (170)
T 3jx9_A 23 ELFDVVRLLAQALVGQGKVYLDAY 46 (170)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCEEEEECC
Confidence 789999999999888889988763
No 296
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=22.48 E-value=1.3e+02 Score=21.44 Aligned_cols=40 Identities=20% Similarity=0.288 Sum_probs=27.8
Q ss_pred HHHhcCCCEEEEcccCcccccccChhhhhhcCCeEEEee-CCCC
Q psy7473 46 KLLEENVKGVVSMNEDYELYFANGREEWNKVGVEFLQLS-TRDI 88 (136)
Q Consensus 46 ~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~i~~~~~p-~~D~ 88 (136)
.|+++||+.+|-+..+... .......+.++....+| ..|.
T Consensus 89 ~l~~~~Id~LvvIGGdgS~---~~a~~L~~~~i~vvgiPkTIDN 129 (320)
T 1pfk_A 89 NLKKRGIDALVVIGGDGSY---MGAMRLTEMGFPCIGLPGTIDN 129 (320)
T ss_dssp HHHHTTCCEEEEEECHHHH---HHHHHHHHTTCCEEEEEBCTTC
T ss_pred HHHHcCCCEEEEECCCchH---HHHHHHHhhCCCEEEEeccccC
Confidence 4888999999999887643 11233345689999999 3443
No 297
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.47 E-value=93 Score=17.28 Aligned_cols=28 Identities=14% Similarity=0.137 Sum_probs=19.6
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
..||++++|.....+.|++ .....|.++
T Consensus 16 ~~l~V~nlp~~~t~~~l~~~f~~~G~i~~v 45 (103)
T 2cq0_A 16 ATIRVTNLSEDTRETDLQELFRPFGSISRI 45 (103)
T ss_dssp EEEEEESCCTTCCHHHHHTTSTTTCCEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhCCCeEEE
Confidence 3599999998888888776 334345444
No 298
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=22.45 E-value=37 Score=23.69 Aligned_cols=13 Identities=15% Similarity=0.358 Sum_probs=9.5
Q ss_pred HcCCeEEEEcCCC
Q psy7473 109 KTGGTVYVHCKAG 121 (136)
Q Consensus 109 ~~~~~VlVHC~~G 121 (136)
..|..||.||.+|
T Consensus 108 ~~g~~IlT~~~s~ 120 (276)
T 1vb5_A 108 DDGDVIITHSFSS 120 (276)
T ss_dssp CTTEEEECCSCCH
T ss_pred cCCCEEEEeCCCh
Confidence 3567888899863
No 299
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.45 E-value=86 Score=17.43 Aligned_cols=28 Identities=11% Similarity=0.318 Sum_probs=18.9
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
..||++++|.....+.|++ .....|.++
T Consensus 16 ~~l~V~nlp~~~t~~~l~~~f~~~G~v~~v 45 (103)
T 2cq3_A 16 KRLHVSNIPFRFRDPDLRQMFGQFGKILDV 45 (103)
T ss_dssp CEEEEESCCTTCCHHHHHHHGGGTSCEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCeEEE
Confidence 4699999998877777665 334344443
No 300
>2lkz_A RNA-binding protein 5; RRM; NMR {Homo sapiens}
Probab=22.30 E-value=70 Score=18.04 Aligned_cols=21 Identities=14% Similarity=0.287 Sum_probs=16.8
Q ss_pred ccCcEEEeCCCCcccHHHHHh
Q psy7473 29 IDENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 29 i~~~l~~g~~~~~~~~~~l~~ 49 (136)
--+.||+++.|.....+.|++
T Consensus 8 ~m~tlfV~nL~~~~tee~L~~ 28 (95)
T 2lkz_A 8 HMDTIILRNIAPHTVVDSIMT 28 (95)
T ss_dssp CCCEEEEESCCTTCCHHHHHH
T ss_pred ccCEEEEeCCCCcCCHHHHHH
Confidence 346799999998887777766
No 301
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=22.20 E-value=1.8e+02 Score=19.39 Aligned_cols=68 Identities=16% Similarity=0.112 Sum_probs=32.3
Q ss_pred HHHHhcCCCEEEEcccCcccccccChhhhhh-cC--CeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCC
Q psy7473 45 NKLLEENVKGVVSMNEDYELYFANGREEWNK-VG--VEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAG 121 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~-~~--i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G 121 (136)
..|.+.|.+.++.-+..... ....+.... .+ +.++...+.| . +.++++++.+.+... +=.++|||.+.
T Consensus 38 ~~l~~~G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~Dv~~---~---~~v~~~~~~~~~~~g-~id~lv~nAg~ 108 (266)
T 4egf_A 38 RAFAAAGARLVLSGRDVSEL--DAARRALGEQFGTDVHTVAIDLAE---P---DAPAELARRAAEAFG-GLDVLVNNAGI 108 (266)
T ss_dssp HHHHHTTCEEEEEESCHHHH--HHHHHHHHHHHCCCEEEEECCTTS---T---THHHHHHHHHHHHHT-SCSEEEEECCC
T ss_pred HHHHHCCCEEEEEeCCHHHH--HHHHHHHHHhcCCcEEEEEecCCC---H---HHHHHHHHHHHHHcC-CCCEEEECCCc
Confidence 45777898766654443221 000111111 23 3333333333 2 345555555544332 24699999753
No 302
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.12 E-value=90 Score=17.40 Aligned_cols=29 Identities=14% Similarity=0.366 Sum_probs=18.9
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+|++|.....+.|++ ..+..|.++.
T Consensus 16 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~ 46 (107)
T 2cph_A 16 SKILVRNIPFQANQREIRELFSTFGELKTVR 46 (107)
T ss_dssp CCEEEESCCTTCCHHHHHHHHHTTSCEEEEE
T ss_pred CEEEEeCCCCcCCHHHHHHHHHccCCeEEEE
Confidence 4699999998777666655 3333454443
No 303
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=21.96 E-value=1.3e+02 Score=20.21 Aligned_cols=70 Identities=17% Similarity=0.141 Sum_probs=33.9
Q ss_pred HHHHhcCCCEEEEcccCcccccccChhhhhh---cCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCC
Q psy7473 45 NKLLEENVKGVVSMNEDYELYFANGREEWNK---VGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAG 121 (136)
Q Consensus 45 ~~l~~~gi~~Vi~l~~~~~~~~~~~~~~~~~---~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G 121 (136)
..|.+.|.+.++..+..... ....+.... ..+.++...+.| ..+.++.+++.+.+... +=.++|||.+.
T Consensus 30 ~~L~~~G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~Dl~~-----~~~~v~~~~~~~~~~~g-~iD~lv~nAg~ 101 (311)
T 3o26_A 30 KQLSSNGIMVVLTCRDVTKG--HEAVEKLKNSNHENVVFHQLDVTD-----PIATMSSLADFIKTHFG-KLDILVNNAGV 101 (311)
T ss_dssp HHHHHTTCEEEEEESCHHHH--HHHHHHHHTTTCCSEEEEECCTTS-----CHHHHHHHHHHHHHHHS-SCCEEEECCCC
T ss_pred HHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCCceEEEEccCCC-----cHHHHHHHHHHHHHhCC-CCCEEEECCcc
Confidence 45777888766665544321 000111111 123333333322 12456666666655432 34699999764
Q ss_pred C
Q psy7473 122 R 122 (136)
Q Consensus 122 ~ 122 (136)
.
T Consensus 102 ~ 102 (311)
T 3o26_A 102 A 102 (311)
T ss_dssp C
T ss_pred c
Confidence 3
No 304
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.68 E-value=1.2e+02 Score=17.27 Aligned_cols=28 Identities=14% Similarity=0.133 Sum_probs=19.5
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
..||+|++|.....+.|++ .....|.++
T Consensus 16 ~~l~V~nLp~~~te~~L~~~F~~fG~V~~v 45 (104)
T 1wex_A 16 PVVHVRGLCESVVEADLVEALEKFGTICYV 45 (104)
T ss_dssp SEEEEESCCSSCCHHHHHHHHTTTSCEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhCCCEEEE
Confidence 4699999998877777666 444455554
No 305
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=21.65 E-value=79 Score=16.89 Aligned_cols=19 Identities=16% Similarity=0.349 Sum_probs=14.4
Q ss_pred CcEEEeCCCCcccHHHHHh
Q psy7473 31 ENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~ 49 (136)
..||+++.|.....+.|++
T Consensus 7 ~~l~V~nlp~~~t~~~l~~ 25 (89)
T 3ucg_A 7 RSIYVGNVDYGATAEELEA 25 (89)
T ss_dssp TEEEEESCCTTCCHHHHHH
T ss_pred CEEEEeCCCCCCCHHHHHH
Confidence 3599999998877666555
No 306
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=21.63 E-value=21 Score=25.54 Aligned_cols=13 Identities=31% Similarity=0.524 Sum_probs=10.1
Q ss_pred HcCCeEEEEcCCC
Q psy7473 109 KTGGTVYVHCKAG 121 (136)
Q Consensus 109 ~~~~~VlVHC~~G 121 (136)
..|..||.||.+|
T Consensus 120 ~~g~~ILTh~~S~ 132 (315)
T 3ecs_A 120 KDGATILTHAYSR 132 (315)
T ss_dssp CTTEEEEECSCCH
T ss_pred CCCCEEEEcCCcH
Confidence 3578999999753
No 307
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=21.62 E-value=78 Score=23.00 Aligned_cols=32 Identities=22% Similarity=0.124 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK--AGRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v 128 (136)
+.++.+.++.+...|-++.+||. .|+++++++
T Consensus 280 it~~~~i~~~A~~~gi~~~~~~~~es~i~~aa~~ 313 (385)
T 3i6e_A 280 LTRAQTVARIAAAHGLMAYGGDMFEAGLAHLAGT 313 (385)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEeCCCCccHHHHHHHH
Confidence 45556666666778889999996 456666554
No 308
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=21.60 E-value=1.3e+02 Score=17.63 Aligned_cols=29 Identities=10% Similarity=0.095 Sum_probs=18.5
Q ss_pred cCcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 30 DENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
...||+|+.|.....+.|++ .....|.++
T Consensus 63 ~~~l~v~nlp~~~~~~~l~~~f~~~G~i~~v 93 (140)
T 2ku7_A 63 KRVLYVGGLAEEVDDKVLHAAFIPFGDITDI 93 (140)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHGGGSCEEEE
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHhcCCEEEE
Confidence 34699999998776666655 333344443
No 309
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=21.60 E-value=75 Score=20.56 Aligned_cols=29 Identities=17% Similarity=0.192 Sum_probs=19.6
Q ss_pred cCcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 30 DENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
.-.||+|++|.....+.|++ ..+..|.++
T Consensus 15 ~~tlfVgnLp~~~te~~L~~~F~~~G~I~~v 45 (213)
T 4f02_A 15 MASLYVGDLHPDVTEAMLYEKFSPAGPILSI 45 (213)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHGGGSCEEEE
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHhhCCEEEE
Confidence 34699999998887777666 333345443
No 310
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=21.51 E-value=77 Score=22.99 Aligned_cols=32 Identities=13% Similarity=-0.033 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK--AGRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v 128 (136)
+.++.+..+.+...|-++.+||. .|+++++++
T Consensus 282 it~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~ 315 (383)
T 3i4k_A 282 LLESKKIAAIAEAGGLACHGATSLEGPIGTAASL 315 (383)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEeCCCCccHHHHHHHH
Confidence 45566666666778889999996 456666554
No 311
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=21.50 E-value=98 Score=21.44 Aligned_cols=28 Identities=29% Similarity=0.513 Sum_probs=23.5
Q ss_pred chHHHHHHHHHHHHHHHHcCCeEEEEcC
Q psy7473 92 PDQDKLERGVDFIQRISKTGGTVYVHCK 119 (136)
Q Consensus 92 ~~~~~~~~~~~~i~~~~~~~~~VlVHC~ 119 (136)
-....+.+++++|.+...+|+.||+-.+
T Consensus 46 kT~~~L~~A~~~i~~~a~~gg~iLfVgT 73 (256)
T 2vqe_B 46 KTMEELERTFRFIEDLAMRGGTILFVGT 73 (256)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 4457889999999998888999998774
No 312
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.47 E-value=1e+02 Score=16.71 Aligned_cols=28 Identities=11% Similarity=0.026 Sum_probs=17.9
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
..||+++.|.....+.|++ .....|.++
T Consensus 16 ~~l~v~nlp~~~t~~~l~~~f~~~G~v~~v 45 (95)
T 2cqc_A 16 CCLGVFGLSLYTTERDLREVFSKYGPIADV 45 (95)
T ss_dssp GCEEEESCCSSCCHHHHHHHHHTTSCEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCCeeEE
Confidence 4699999998776666555 333344443
No 313
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.43 E-value=1e+02 Score=16.25 Aligned_cols=29 Identities=10% Similarity=0.080 Sum_probs=18.9
Q ss_pred cCcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 30 DENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
...||+|+.|.....+.|++ .....|.++
T Consensus 12 ~~~l~V~~l~~~~t~~~l~~~f~~~G~i~~~ 42 (85)
T 2ytc_A 12 ITTLYVGGLGDTITETDLRNHFYQFGEIRTI 42 (85)
T ss_dssp CCCEEEECCTTTSCHHHHHHHHHTTSCEEEE
T ss_pred ccEEEEcCCCCCCCHHHHHHHHHhCCCEeEE
Confidence 34699999998877776655 333334444
No 314
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.35 E-value=66 Score=18.57 Aligned_cols=28 Identities=18% Similarity=0.167 Sum_probs=18.8
Q ss_pred CcEEEeCCCC-cccHHHHHh--cCCCEEEEc
Q psy7473 31 ENIILGALPF-KRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 31 ~~l~~g~~~~-~~~~~~l~~--~gi~~Vi~l 58 (136)
..||+|++|. ....+.|++ .....|.++
T Consensus 16 ~~l~V~nLp~~~~te~dL~~lF~~fG~V~~v 46 (102)
T 1x4d_A 16 RVVHIMDFQRGKNLRYQLLQLVEPFGVISNH 46 (102)
T ss_dssp CEEEEESCCCSSSHHHHHHTTTGGGSCEEEE
T ss_pred CEEEEeCCCCCcCCHHHHHHHHHhcCCEEEE
Confidence 4699999998 766677666 333345544
No 315
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=21.24 E-value=1.1e+02 Score=20.22 Aligned_cols=26 Identities=12% Similarity=0.022 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCC
Q psy7473 96 KLERGVDFIQRISKTGGTVYVHCKAG 121 (136)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~VlVHC~~G 121 (136)
+-+.+...++.+.+.|.+|.+||...
T Consensus 107 ~~~~~~~~~~~a~~~~~pv~iH~~~~ 132 (265)
T 2gzx_A 107 QKEVFRKQIALAKRLKLPIIIHNREA 132 (265)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESC
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeccc
Confidence 33444555555666788899998643
No 316
>3p5t_L Cleavage and polyadenylation specificity factor S; RRM domain, poly(A) site recognition, RNA, nuclear, RNA BIND protein; 2.70A {Homo sapiens} PDB: 3p6y_C
Probab=21.18 E-value=60 Score=17.69 Aligned_cols=18 Identities=22% Similarity=0.396 Sum_probs=12.6
Q ss_pred cEEEeCCCCcccHHHHHh
Q psy7473 32 NIILGALPFKRLTNKLLE 49 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~ 49 (136)
.||+|+.+.....+.|++
T Consensus 3 ~l~V~nL~~~~t~~~l~~ 20 (90)
T 3p5t_L 3 ALYIGNLTWWTTDEDLTE 20 (90)
T ss_dssp -CEEESCCTTCCHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHH
Confidence 489999988766655544
No 317
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=21.17 E-value=62 Score=24.02 Aligned_cols=31 Identities=3% Similarity=-0.020 Sum_probs=20.9
Q ss_pred chHHHHHHHHHHHHHHHHc----CCeEEEEcCCCC
Q psy7473 92 PDQDKLERGVDFIQRISKT----GGTVYVHCKAGR 122 (136)
Q Consensus 92 ~~~~~~~~~~~~i~~~~~~----~~~VlVHC~~G~ 122 (136)
+...+.+-+.+.|+-+.+. +.||.|||..-.
T Consensus 173 ~~e~Q~~~F~~QL~LA~e~~~~~~lPv~IH~R~A~ 207 (401)
T 3e2v_A 173 SKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSAC 207 (401)
T ss_dssp CHHHHHHHHHHHHHHTTSSHHHHTSCEEEEEESCH
T ss_pred CHHHHHHHHHHHHHHHHhhhccCCCeEEEEecchH
Confidence 3344555555666666666 899999997543
No 318
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=21.16 E-value=81 Score=20.49 Aligned_cols=20 Identities=15% Similarity=0.255 Sum_probs=16.5
Q ss_pred CCeEEEEcCCCCChHHHHHH
Q psy7473 111 GGTVYVHCKAGRTRSATLVG 130 (136)
Q Consensus 111 ~~~VlVHC~~G~~RS~~v~~ 130 (136)
..+||+=|.+.+.||++.-+
T Consensus 34 ~~~VLFVC~gNiCRSpmAEa 53 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEA 53 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHH
T ss_pred CCEEEEECCCchhHHHHHHH
Confidence 35899999999999987544
No 319
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=21.15 E-value=49 Score=24.40 Aligned_cols=32 Identities=9% Similarity=-0.026 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC-CCCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK-AGRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~-~G~~RS~~v 128 (136)
+.++.+..+.+...|-++.+||. .|+++++++
T Consensus 289 it~~~kia~~A~~~gi~v~~h~~~s~i~~aa~~ 321 (412)
T 4e4u_A 289 LLEAKKIATLAEVHYAQIAPHLYNGPVGAAASI 321 (412)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEecCCCcHHHHHHHH
Confidence 45555555556677889999997 445454443
No 320
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=21.04 E-value=1.3e+02 Score=21.98 Aligned_cols=31 Identities=10% Similarity=0.077 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCCCC--ChHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKAGR--TRSAT 127 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~G~--~RS~~ 127 (136)
+.++.+.++.+...|-++.+||.... ++++.
T Consensus 298 it~~~~ia~~A~~~gi~~~~h~~~e~~i~~aa~ 330 (398)
T 4dye_A 298 IAATKALAAHCETFGLGMNLHSGGELGIATAAH 330 (398)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEcCCcchHHHHHHH
Confidence 56667777777788999999996543 44443
No 321
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=20.99 E-value=68 Score=23.35 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~v 128 (136)
+.++.+.++.+...|-++.+||.. |+++++.+
T Consensus 277 it~~~~i~~~A~~~g~~~~~~~~~es~ig~aa~~ 310 (397)
T 2qde_A 277 LLKAQRWLTLARLANLPVICGCMVGSGLEASPAA 310 (397)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHH
Confidence 455566666667788899999864 45555443
No 322
>1x5o_A RNA binding motif, single-stranded interacting protein 1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.89 E-value=1.1e+02 Score=17.31 Aligned_cols=28 Identities=21% Similarity=0.323 Sum_probs=19.5
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
..||+++.|.....+.|++ .....|.++
T Consensus 26 ~~l~V~nlp~~~t~~~l~~~F~~~G~i~~~ 55 (114)
T 1x5o_A 26 TNLYISNLPLSMDEQELENMLKPFGQVIST 55 (114)
T ss_dssp TEEEEESCCTTCCHHHHHHTTTTTSCEEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCEEEE
Confidence 3699999998887777776 333345444
No 323
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=20.87 E-value=83 Score=20.28 Aligned_cols=21 Identities=24% Similarity=0.303 Sum_probs=16.9
Q ss_pred CCeEEEEcCCCCChHHHHHHH
Q psy7473 111 GGTVYVHCKAGRTRSATLVGC 131 (136)
Q Consensus 111 ~~~VlVHC~~G~~RS~~v~~a 131 (136)
.-+||+=|.+.+.||++.-+.
T Consensus 34 ~mkVLFVC~GNiCRSpmAE~l 54 (180)
T 4egs_A 34 SMRVLFVCTGNTCRSPMAEGI 54 (180)
T ss_dssp CCEEEEEESSSSSHHHHHHHH
T ss_pred CeEEEEEeCCCcccCHHHHHH
Confidence 347999999999999875543
No 324
>2j76_E EIF-4B, EIF4B, eukaryotic translation initiation factor 4B; protein biosynthesis, RNA recognition motif, RNA binding domain, RRM, RBD, RNP; NMR {Homo sapiens}
Probab=20.82 E-value=73 Score=17.77 Aligned_cols=28 Identities=18% Similarity=0.429 Sum_probs=18.1
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
-.||+|+.+.....+.|++ .... |.++.
T Consensus 20 ~~l~V~nLp~~~t~~~l~~~F~~~G-i~~v~ 49 (100)
T 2j76_E 20 YTAFLGNLPYDVTEESIKEFFRGLN-ISAVR 49 (100)
T ss_dssp CEEEESCCSSCCSSSHHHHHSCSSC-EEEEE
T ss_pred cEEEEeCCCCCCCHHHHHHHHHhcC-CeEEE
Confidence 4699999988766666655 3333 55443
No 325
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=20.81 E-value=1.5e+02 Score=20.49 Aligned_cols=33 Identities=15% Similarity=0.296 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHH
Q psy7473 95 DKLERGVDFIQRISKTGGTVYVHCKAGRTRSAT 127 (136)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~ 127 (136)
..+.++.+.+......+.+||++=..|.|.|-.
T Consensus 9 ~~~~~~~~~~~~~a~~~~~vLi~Ge~GtGKt~l 41 (304)
T 1ojl_A 9 PAMQHLLNEIAMVAPSDATVLIHGDSGTGKELV 41 (304)
T ss_dssp HHHHHHHHHHHHHCSTTSCEEEESCTTSCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcEEEECCCCchHHHH
Confidence 566777777777777778999999999999844
No 326
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=20.80 E-value=50 Score=24.05 Aligned_cols=23 Identities=13% Similarity=-0.058 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK 119 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~ 119 (136)
+.++.+.++.+...|-++.+||.
T Consensus 297 ite~~~i~~~A~~~g~~~~~h~~ 319 (403)
T 2ox4_A 297 FTEFKKIADMAHIFEVTVQAHVA 319 (403)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCC
T ss_pred HHHHHHHHHHHHHcCCEEeecCC
Confidence 45556666666778889999998
No 327
>2cqg_A TDP-43, TAR DNA-binding protein-43; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.71 E-value=87 Score=17.40 Aligned_cols=19 Identities=32% Similarity=0.538 Sum_probs=14.7
Q ss_pred CcEEEeCCCCcccHHHHHh
Q psy7473 31 ENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~ 49 (136)
..||++++|.....+.|++
T Consensus 16 ~~l~v~nlp~~~t~~~l~~ 34 (103)
T 2cqg_A 16 SDLIVLGLPWKTTEQDLKE 34 (103)
T ss_dssp CCEEEESCCSSCCHHHHHH
T ss_pred CEEEEEcCCCcCCHHHHHH
Confidence 4699999998877766655
No 328
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.68 E-value=76 Score=17.27 Aligned_cols=19 Identities=11% Similarity=0.170 Sum_probs=14.8
Q ss_pred CcEEEeCCCCcccHHHHHh
Q psy7473 31 ENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~ 49 (136)
..||+|+.|.....+.|++
T Consensus 11 ~~l~V~nLp~~~t~~~l~~ 29 (92)
T 2dgt_A 11 TKLHVGNISPTCTNQELRA 29 (92)
T ss_dssp EEEEEESCCSSCCHHHHHH
T ss_pred CEEEEeCCCCCCCHHHHHH
Confidence 4699999998877776655
No 329
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=20.65 E-value=1.9e+02 Score=19.09 Aligned_cols=72 Identities=11% Similarity=0.029 Sum_probs=33.9
Q ss_pred HHHHHhcCCCEEEEcccCccc-ccccChhhhhhcCCeEEEeeCCCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCC
Q psy7473 44 TNKLLEENVKGVVSMNEDYEL-YFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGR 122 (136)
Q Consensus 44 ~~~l~~~gi~~Vi~l~~~~~~-~~~~~~~~~~~~~i~~~~~p~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~ 122 (136)
...|.+.|.+.++.-+.+... ......+......+.++...+.| .+.++++++.+.+... +=.++|||.+..
T Consensus 26 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~------~~~v~~~~~~~~~~~g-~id~li~~Ag~~ 98 (266)
T 3oig_A 26 ARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN------DAEIETCFASIKEQVG-VIHGIAHCIAFA 98 (266)
T ss_dssp HHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS------SHHHHHHHHHHHHHHS-CCCEEEECCCCC
T ss_pred HHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC------HHHHHHHHHHHHHHhC-CeeEEEEccccc
Confidence 356777898876654443210 00000001111134555444443 2455666655544322 235899997643
No 330
>2fc8_A NCL protein; structure genomics, RRM_1 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.63 E-value=77 Score=17.56 Aligned_cols=20 Identities=15% Similarity=0.220 Sum_probs=16.6
Q ss_pred cCcEEEeCCCCcccHHHHHh
Q psy7473 30 DENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~ 49 (136)
...||++++|.....+.|++
T Consensus 15 ~~~l~V~nLp~~~t~~~l~~ 34 (102)
T 2fc8_A 15 SKTLFVKGLSEDTTEETLKE 34 (102)
T ss_dssp CSSEEEECCCTTCCHHHHHH
T ss_pred CCEEEEeCCCCccCHHHHHH
Confidence 34699999998888888877
No 331
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=20.61 E-value=1.7e+02 Score=21.36 Aligned_cols=24 Identities=17% Similarity=0.119 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
+.++.+.++.+.+.|-++.+||+.
T Consensus 338 it~a~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kcz_A 338 VNNIADAIMYCKANGMGAYCGGTC 361 (413)
T ss_dssp THHHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHHHHHcCCEEEecCCC
Confidence 456667777777888999999854
No 332
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.59 E-value=1.1e+02 Score=16.44 Aligned_cols=29 Identities=24% Similarity=0.416 Sum_probs=19.8
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+++.|.....+.|++ .....|.++.
T Consensus 17 ~~l~V~nlp~~~t~~~l~~~f~~~G~v~~v~ 47 (94)
T 2e5h_A 17 STVYVSNLPFSLTNNDLYRIFSKYGKVVKVT 47 (94)
T ss_dssp TSEEEESCCTTSCHHHHHHHTTTTSCEEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCCeEEEE
Confidence 4699999998877777766 3444455443
No 333
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=20.55 E-value=84 Score=22.75 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC--CCChHHHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA--GRTRSATLVG 130 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~--G~~RS~~v~~ 130 (136)
+.++.+.++.+.+.|-++.+||.. |+++++.+..
T Consensus 289 it~~~~i~~~A~~~gi~~~~~~~~es~i~~aa~~hl 324 (386)
T 1wue_A 289 IHEALKIAAFCQENDLLVWLGGMFESGVGRALNLQF 324 (386)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEECCCcccHHHHHHHHHH
Confidence 455556666666788899999964 5666554433
No 334
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=20.51 E-value=85 Score=22.88 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC--CCCChHHHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK--AGRTRSATLVG 130 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~--~G~~RS~~v~~ 130 (136)
+.++.+.++.+...|-++.+||. .|+++++.+..
T Consensus 277 it~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~~l 312 (388)
T 3qld_A 277 FGATLRALDVAGEAGMAAWVGGMYETGVGRVHGLIA 312 (388)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEecCccchHHHHHHHHHH
Confidence 45555666666678889999996 45666655443
No 335
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=20.51 E-value=1.2e+02 Score=16.58 Aligned_cols=29 Identities=24% Similarity=0.644 Sum_probs=19.0
Q ss_pred CcEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 31 ENIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
..||+|+.+.....+.|++ ..+..|.++.
T Consensus 3 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~ 33 (96)
T 2x1f_A 3 RVVYLGSIPYDQTEEQILDLCSNVGPVINLK 33 (96)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEE
T ss_pred cEEEEECCCCCCCHHHHHHHHHhcCCEEEEE
Confidence 3599999998777666655 3444455543
No 336
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=20.47 E-value=91 Score=19.87 Aligned_cols=19 Identities=21% Similarity=0.261 Sum_probs=15.9
Q ss_pred CeEEEEcCCCCChHHHHHH
Q psy7473 112 GTVYVHCKAGRTRSATLVG 130 (136)
Q Consensus 112 ~~VlVHC~~G~~RS~~v~~ 130 (136)
.+||+=|.+...||++.-+
T Consensus 27 ~~VLFVCtgNicRSpmAEa 45 (168)
T 2wja_A 27 DSILVICTGNICRSPIGER 45 (168)
T ss_dssp SEEEEEESSSSSHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHH
Confidence 4799999999999987544
No 337
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=20.45 E-value=94 Score=19.79 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=16.0
Q ss_pred CeEEEEcCCCCChHHHHHH
Q psy7473 112 GTVYVHCKAGRTRSATLVG 130 (136)
Q Consensus 112 ~~VlVHC~~G~~RS~~v~~ 130 (136)
.+||+=|.+...||++.-+
T Consensus 23 ~~VLFVCtgN~cRSpmAEa 41 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAER 41 (167)
T ss_dssp CEEEEEESSSSSHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHHHH
Confidence 4799999999999987544
No 338
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=20.43 E-value=48 Score=24.09 Aligned_cols=24 Identities=13% Similarity=-0.067 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA 120 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~ 120 (136)
+.++.+.++.+.+.|-++.+||..
T Consensus 287 it~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 287 LMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp HHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHHHHHHHHcCCeEecCCCC
Confidence 456666666667788899999963
No 339
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.32 E-value=1.2e+02 Score=16.59 Aligned_cols=28 Identities=7% Similarity=0.201 Sum_probs=18.0
Q ss_pred cEEEeCCCCcccHHHHHh--cCCCEEEEcc
Q psy7473 32 NIILGALPFKRLTNKLLE--ENVKGVVSMN 59 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~--~gi~~Vi~l~ 59 (136)
.||+++.|.....+.|++ .....|.++.
T Consensus 10 ~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~ 39 (99)
T 1whw_A 10 RLFVRNLSYTSSEEDLEKLFSAYGPLSELH 39 (99)
T ss_dssp EEEEECCCTTCCHHHHHHHHHTTSCEEEEE
T ss_pred EEEEeCCCCCCCHHHHHHHHHhcCCEeEEE
Confidence 599999997776666555 3333444443
No 340
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=20.31 E-value=75 Score=21.85 Aligned_cols=18 Identities=28% Similarity=0.191 Sum_probs=13.2
Q ss_pred cCCeEEEEcCCCCChHHH
Q psy7473 110 TGGTVYVHCKAGRTRSAT 127 (136)
Q Consensus 110 ~~~~VlVHC~~G~~RS~~ 127 (136)
.++.|.|..++|.|.|.+
T Consensus 40 ~~~vI~v~~KGGvGKTT~ 57 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTT 57 (307)
T ss_dssp CCEEEEEECSTTSSHHHH
T ss_pred CceEEEEECCCCccHHHH
Confidence 445677778999999843
No 341
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=20.29 E-value=1.6e+02 Score=19.86 Aligned_cols=34 Identities=18% Similarity=0.271 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCCCCChHHHHH
Q psy7473 94 QDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129 (136)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~ 129 (136)
.+..+++.++|++. ..++|+|=.++|++=|.+..
T Consensus 7 ~~~~~~l~~~i~~~--~~~~vvv~lSGGiDSs~~~~ 40 (257)
T 2e18_A 7 DKVIERILEFIREK--GNNGVVIGISGGVDSATVAY 40 (257)
T ss_dssp HHHHHHHHHHHHHH--CTTCEEEECCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--CCCcEEEEecCCHHHHHHHH
Confidence 34556777777776 45789999999987554433
No 342
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=20.22 E-value=76 Score=23.95 Aligned_cols=29 Identities=14% Similarity=0.118 Sum_probs=19.6
Q ss_pred HHHHHHHH-----HHcCCeEEEEcCCCCChHHHH
Q psy7473 100 GVDFIQRI-----SKTGGTVYVHCKAGRTRSATL 128 (136)
Q Consensus 100 ~~~~i~~~-----~~~~~~VlVHC~~G~~RS~~v 128 (136)
+...+++. .....+++|-|.+|+|-|-.+
T Consensus 382 fg~~l~r~~~~~~~~~~~~~~vVC~~GigtS~lL 415 (485)
T 3sqn_A 382 LASLLEKQAIYSIQAQTMTAYFLFQGEPAWKAFL 415 (485)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEEECCSCHHHHHHH
T ss_pred HHHHHHhccccccccccceEEEECCCchhHHHHH
Confidence 45555554 233468899999999877554
No 343
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.21 E-value=80 Score=17.07 Aligned_cols=19 Identities=16% Similarity=0.195 Sum_probs=14.3
Q ss_pred CcEEEeCCCCcccHHHHHh
Q psy7473 31 ENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~ 49 (136)
..||+|+.|.....+.|++
T Consensus 10 ~~l~V~nlp~~~t~~~l~~ 28 (90)
T 2dnp_A 10 WKIFVGNVSAACTSQELRS 28 (90)
T ss_dssp CCEEEESCCTTCCHHHHHH
T ss_pred CEEEEeCCCCCCCHHHHHH
Confidence 4699999998776666544
No 344
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=20.07 E-value=88 Score=16.98 Aligned_cols=29 Identities=17% Similarity=0.261 Sum_probs=18.7
Q ss_pred cCcEEEeCCCCcccHHHHHh--cCCCEEEEc
Q psy7473 30 DENIILGALPFKRLTNKLLE--ENVKGVVSM 58 (136)
Q Consensus 30 ~~~l~~g~~~~~~~~~~l~~--~gi~~Vi~l 58 (136)
...||+++.|.....+.|++ .....|.++
T Consensus 16 ~~~l~v~nlp~~~~~~~l~~~F~~~G~i~~v 46 (95)
T 2ywk_A 16 DRTVFVGNLEARVREEILYELFLQAGPLTKV 46 (95)
T ss_dssp GGEEEEECCCTTCCHHHHHHHHGGGSCEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHhcCCEEEE
Confidence 34699999998777766655 333344443
No 345
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=20.06 E-value=49 Score=24.17 Aligned_cols=23 Identities=13% Similarity=0.040 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcC
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCK 119 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~ 119 (136)
+.++.+.++.+...|-++.+||.
T Consensus 303 ite~~~i~~~A~~~g~~~~~h~~ 325 (407)
T 2o56_A 303 ITEVKKICDMAHVYDKTVQIHVC 325 (407)
T ss_dssp HHHHHHHHHHHHTTTCEECCCCC
T ss_pred HHHHHHHHHHHHHcCCeEeecCC
Confidence 55666666667778889999998
No 346
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=20.05 E-value=77 Score=18.54 Aligned_cols=18 Identities=22% Similarity=0.182 Sum_probs=14.0
Q ss_pred cEEEeCCCCcccHHHHHh
Q psy7473 32 NIILGALPFKRLTNKLLE 49 (136)
Q Consensus 32 ~l~~g~~~~~~~~~~l~~ 49 (136)
.||+|+.|.....+.|++
T Consensus 30 ~l~VgnLp~~~te~dL~~ 47 (111)
T 2jvr_A 30 RITMKNLPEGCSWQDLKD 47 (111)
T ss_dssp EEEEECSSCCCCHHHHHH
T ss_pred EEEEECCCCCCCHHHHHH
Confidence 699999998877666554
No 347
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=20.04 E-value=1.4e+02 Score=22.09 Aligned_cols=19 Identities=11% Similarity=0.324 Sum_probs=14.3
Q ss_pred CcEEEeCCCCcccHHHHHh
Q psy7473 31 ENIILGALPFKRLTNKLLE 49 (136)
Q Consensus 31 ~~l~~g~~~~~~~~~~l~~ 49 (136)
..||||+++.....+.|.+
T Consensus 103 ~~lfV~nL~~~~te~~L~~ 121 (437)
T 3pgw_S 103 KTLFVARVNYDTTESKLRR 121 (437)
T ss_pred CEEEEeCCCCCCCHHHHHH
Confidence 3699999988776665554
No 348
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=20.02 E-value=2.4e+02 Score=20.05 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcCC---CCChHHHH
Q psy7473 97 LERGVDFIQRISKTGGTVYVHCKA---GRTRSATL 128 (136)
Q Consensus 97 ~~~~~~~i~~~~~~~~~VlVHC~~---G~~RS~~v 128 (136)
+.++.+.++.+...|-++.+||.. |+++++.+
T Consensus 271 it~~~~i~~~A~~~gi~~~~~~~~~es~i~~~a~~ 305 (354)
T 3jva_A 271 IHEALKINQICETAGIECMIGCMAEETTIGITAAA 305 (354)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEecCCCcccHHHHHHHH
Confidence 455566666667788999999975 34444433
Done!