BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7475
(295 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 78/114 (68%), Gaps = 2/114 (1%)
Query: 25 WYDRIDENIILGALPFKRLTNKL-LEENVKGVVSMNEDYELYF-ANGREEWNKVGVEFLQ 82
WY RID ++LGALP K +T +L L+ENV+GV++MNE+YE F N +EW K GVE L+
Sbjct: 1 WYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLR 60
Query: 83 LSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKV 136
LST D+ P L +GV F + G VYVHCKAGR+RSAT+V YL++V
Sbjct: 61 LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQV 114
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 78/115 (67%), Gaps = 2/115 (1%)
Query: 178 WYDRIDENIILGALPFKRLTNKL-LEENVKGVVSMNEDYELYF-ANGREEWNKVGVEFLQ 235
WY RID ++LGALP K +T +L L+ENV+GV++MNE+YE F N +EW K GVE L+
Sbjct: 1 WYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLR 60
Query: 236 LSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKLE 290
LST D+ P L +GV F + G VYVHCKAGR+RSAT+V YL+++
Sbjct: 61 LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVH 115
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 25 WYDRIDENIILGALPFKRLTNKL-LEENVKGVVSMNEDYELYF-ANGREEWNKVGVEFLQ 82
WY RID ++LGALP K +T +L L+ENV+GV++MNE+YE F N +EW K GVE L+
Sbjct: 2 WYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLR 61
Query: 83 LSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKV 136
LST D+ P L +GV F + G VYVH KAGR+RSAT+V YL++V
Sbjct: 62 LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHSKAGRSRSATMVAAYLIQV 115
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 77/115 (66%), Gaps = 2/115 (1%)
Query: 178 WYDRIDENIILGALPFKRLTNKL-LEENVKGVVSMNEDYELYF-ANGREEWNKVGVEFLQ 235
WY RID ++LGALP K +T +L L+ENV+GV++MNE+YE F N +EW K GVE L+
Sbjct: 2 WYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLR 61
Query: 236 LSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKLE 290
LST D+ P L +GV F + G VYVH KAGR+RSAT+V YL+++
Sbjct: 62 LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHSKAGRSRSATMVAAYLIQVH 116
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 71 EEWNKVGVEFLQLSTRDIFDTPDQD---KLERGVDFIQR-ISKTGGTVYVHCKAGRTRSA 126
E + +G+ +L + + D+P D + DFI R +S+ GG + VHC G +RSA
Sbjct: 44 EAYEGLGIRYLGV---EAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSA 100
Query: 127 TLVGCYLM 134
TLV YLM
Sbjct: 101 TLVLAYLM 108
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 224 EEWNKVGVEFLQLSTRDIFDTPDQD---KLERGVDFIQR-ISKTGGTVYVHCKAGRTRSA 279
E + +G+ +L + + D+P D + DFI R +S+ GG + VHC G +RSA
Sbjct: 44 EAYEGLGIRYLGV---EAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSA 100
Query: 280 TLVGCYLM 287
TLV YLM
Sbjct: 101 TLVLAYLM 108
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 78 VEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKVT 137
+ +L++ D + P + + ++FI GG VH AG +RS T+V Y+M VT
Sbjct: 51 ITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVT 110
Query: 138 SRRWYDRID 146
W D ++
Sbjct: 111 GLGWRDVLE 119
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 231 VEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKL 289
+ +L++ D + P + + ++FI GG VH AG +RS T+V Y+M +
Sbjct: 51 ITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTV 109
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 71 EEWNKVGVEFLQLSTRDIFDTPDQD---KLERGVDFIQR-ISKTGGTVYVHCKAGRTRSA 126
E + +G+ +L + + D+P D + DFI R +S+ GG + VH G +RSA
Sbjct: 45 EAYEGLGIRYLGV---EAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHSAVGVSRSA 101
Query: 127 TLVGCYLM 134
TLV YLM
Sbjct: 102 TLVLAYLM 109
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 224 EEWNKVGVEFLQLSTRDIFDTPDQD---KLERGVDFIQR-ISKTGGTVYVHCKAGRTRSA 279
E + +G+ +L + + D+P D + DFI R +S+ GG + VH G +RSA
Sbjct: 45 EAYEGLGIRYLGV---EAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHSAVGVSRSA 101
Query: 280 TLVGCYLM 287
TLV YLM
Sbjct: 102 TLVLAYLM 109
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 77 GVEFLQLSTRDIFDTPDQD---KLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYL 133
GV++L + D +P Q+ + + FI G + VHC AG +RS TLV Y+
Sbjct: 49 GVKYLCIPAAD---SPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYI 105
Query: 134 MKVTSRRWYDRI 145
M VT W D +
Sbjct: 106 MTVTDFGWEDAL 117
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 230 GVEFLQLSTRDIFDTPDQD---KLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYL 286
GV++L + D +P Q+ + + FI G + VHC AG +RS TLV Y+
Sbjct: 49 GVKYLCIPAAD---SPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYI 105
Query: 287 MKL 289
M +
Sbjct: 106 MTV 108
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 232 EFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKLEP 291
E++++ D+ P + D I +S+ G VHC AG +RSATL YLMK
Sbjct: 71 EYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHN 130
Query: 292 V 292
V
Sbjct: 131 V 131
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 79 EFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
E++++ D+ P + D I +S+ G VHC AG +RSATL YLMK
Sbjct: 71 EYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMK 127
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 73 WNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI-QRISKTGGTVYVHCKAGRTRSATLVGC 131
+ G+ +L + D + ER DFI Q +++ G V VHC+ G +RS TLV
Sbjct: 77 YKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIA 136
Query: 132 YLM 134
YLM
Sbjct: 137 YLM 139
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 226 WNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI-QRISKTGGTVYVHCKAGRTRSATLVGC 284
+ G+ +L + D + ER DFI Q +++ G V VHC+ G +RS TLV
Sbjct: 77 YKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIA 136
Query: 285 YLM 287
YLM
Sbjct: 137 YLM 139
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 73 WNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI-QRISKTGGTVYVHCKAGRTRSATLVGC 131
+ G+ +L + D + ER DFI Q +++ G V VHC+ G +RS TLV
Sbjct: 76 YKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIA 135
Query: 132 YLM 134
YLM
Sbjct: 136 YLM 138
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 226 WNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI-QRISKTGGTVYVHCKAGRTRSATLVGC 284
+ G+ +L + D + ER DFI Q +++ G V VHC+ G +RS TLV
Sbjct: 76 YKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIA 135
Query: 285 YLM 287
YLM
Sbjct: 136 YLM 138
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 35 LGALPFKRLTNK---LLEENVKGVVSMNEDYELYFANGREEWNKV-GVEFLQLSTRDIFD 90
L L RL LL+ V+ +VS+ E G + G+ +L D F
Sbjct: 16 LAGLALPRLPAHYQFLLDLGVRHLVSLTE-------RGPPHSDSCPGLTLHRLRIPD-FC 67
Query: 91 TPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKVTSRRWYDRIDE 147
P D+++R V + + G V VHC G R+ T++ CYL+K D I E
Sbjct: 68 PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAE 124
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 188 LGALPFKRLTNK---LLEENVKGVVSMNEDYELYFANGREEWNKV-GVEFLQLSTRDIFD 243
L L RL LL+ V+ +VS+ E G + G+ +L D F
Sbjct: 16 LAGLALPRLPAHYQFLLDLGVRHLVSLTE-------RGPPHSDSCPGLTLHRLRIPD-FC 67
Query: 244 TPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 288
P D+++R V + + G V VHC G R+ T++ CYL+K
Sbjct: 68 PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVK 112
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 35 LGALPFKRLTNK---LLEENVKGVVSMNEDYELYFANGREEWNKV-GVEFLQLSTRDIFD 90
L L RL LL+ V+ +VS+ E G + G+ +L D F
Sbjct: 17 LAGLALPRLPAHYQFLLDLGVRHLVSLTE-------RGPPHSDSCPGLTLHRLRIPD-FC 68
Query: 91 TPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKVTSRRWYDRIDE 147
P D+++R V + + G V VHC G R+ T + CYL+K D I E
Sbjct: 69 PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTXLACYLVKERGLAAGDAIAE 125
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Query: 188 LGALPFKRLTNK---LLEENVKGVVSMNEDYELYFANGREEWNKV-GVEFLQLSTRDIFD 243
L L RL LL+ V+ +VS+ E G + G+ +L D F
Sbjct: 17 LAGLALPRLPAHYQFLLDLGVRHLVSLTE-------RGPPHSDSCPGLTLHRLRIPD-FC 68
Query: 244 TPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 288
P D+++R V + + G V VHC G R+ T + CYL+K
Sbjct: 69 PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTXLACYLVK 113
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 95 DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKVTSRRWYDRID 146
+ +DFI + + GG V VH +AG +RS T+ YLMK R + D
Sbjct: 67 SHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFD 118
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 248 DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 288
+ +DFI + + GG V VH +AG +RS T+ YLMK
Sbjct: 67 SHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMK 107
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 88 IFDTPDQD---KLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
+FD P +D LE ++ + GG+ V+CK GR+RSA + YLM+
Sbjct: 63 VFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMR 113
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 241 IFDTPDQD---KLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 288
+FD P +D LE ++ + GG+ V+CK GR+RSA + YLM+
Sbjct: 63 VFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMR 113
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 23/76 (30%)
Query: 60 EDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCK 119
+ ++L+FA+G + + EFL DI + + G + VHCK
Sbjct: 241 DHHDLFFADGSTPTDAIVKEFL-----DICENAE------------------GAIAVHCK 277
Query: 120 AGRTRSATLVGCYLMK 135
AG R+ TL+ CY+MK
Sbjct: 278 AGLGRTGTLIACYIMK 293
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 23/76 (30%)
Query: 213 EDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCK 272
+ ++L+FA+G + + EFL DI + + G + VHCK
Sbjct: 241 DHHDLFFADGSTPTDAIVKEFL-----DICENAE------------------GAIAVHCK 277
Query: 273 AGRTRSATLVGCYLMK 288
AG R+ TL+ CY+MK
Sbjct: 278 AGLGRTGTLIACYIMK 293
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 73 WNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI-QRISKTGGTVYVHCKAGRTRSATLVGC 131
+ G+ +L + D + ER DFI Q +++ G V VH + G +RS TLV
Sbjct: 77 YKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIA 136
Query: 132 YLM 134
YLM
Sbjct: 137 YLM 139
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 226 WNKVGVEFLQLSTRDIFDTPDQDKLERGVDFI-QRISKTGGTVYVHCKAGRTRSATLVGC 284
+ G+ +L + D + ER DFI Q +++ G V VH + G +RS TLV
Sbjct: 77 YKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIA 136
Query: 285 YLM 287
YLM
Sbjct: 137 YLM 139
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 97 LERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKVTSRRWYDRIDE 147
+ + FI + +GG V VH +AG +RSAT+ YLM+ SRR R+DE
Sbjct: 67 FQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQ--SRR--VRLDE 113
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 250 LERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 288
+ + FI + +GG V VH +AG +RSAT+ YLM+
Sbjct: 67 FQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQ 105
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 78 VEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKVT 137
++++Q+ D ++ D + D I + G +HC AG +RSA L YLMK
Sbjct: 64 IQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYH 123
Query: 138 SRRWYD 143
+ D
Sbjct: 124 AMSLLD 129
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 231 VEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 288
++++Q+ D ++ D + D I + G +HC AG +RSA L YLMK
Sbjct: 64 IQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMK 121
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 109 KTGGTVYVHCKAGRTRSATLVGCYLMKVTSRRWYD 143
+ G + +HC+AG +RSAT+V YLMK T D
Sbjct: 85 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTD 119
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 262 KTGGTVYVHCKAGRTRSATLVGCYLMK 288
+ G + +HC+AG +RSAT+V YLMK
Sbjct: 85 QCGKGLLIHCQAGVSRSATIVIAYLMK 111
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 109 KTGGTVYVHCKAGRTRSATLVGCYLMKVTSRRWYD 143
+ G + +HC+AG +RSAT+V YLMK T D
Sbjct: 81 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTD 115
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 262 KTGGTVYVHCKAGRTRSATLVGCYLMK 288
+ G + +HC+AG +RSAT+V YLMK
Sbjct: 81 QCGKGLLIHCQAGVSRSATIVIAYLMK 107
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 23/76 (30%)
Query: 60 EDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCK 119
+ ++L+FA+G + + EFL DI + + G + VH K
Sbjct: 241 DHHDLFFADGSTPTDAIVKEFL-----DICENAE------------------GAIAVHSK 277
Query: 120 AGRTRSATLVGCYLMK 135
AG R+ TL+ CY+MK
Sbjct: 278 AGLGRTGTLIACYIMK 293
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 23/76 (30%)
Query: 213 EDYELYFANGREEWNKVGVEFLQLSTRDIFDTPDQDKLERGVDFIQRISKTGGTVYVHCK 272
+ ++L+FA+G + + EFL DI + + G + VH K
Sbjct: 241 DHHDLFFADGSTPTDAIVKEFL-----DICENAE------------------GAIAVHSK 277
Query: 273 AGRTRSATLVGCYLMK 288
AG R+ TL+ CY+MK
Sbjct: 278 AGLGRTGTLIACYIMK 293
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 77 GVEFLQLSTRD--IFDTPDQDKLERGVDFIQR-ISKTGGTVYVHCKAGRTRSATLVGCYL 133
GVE L T D +F P FI R +S + VHC GR+RSATLV YL
Sbjct: 109 GVEADDLPTFDLSVFFYP-------AAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYL 161
Query: 134 M 134
M
Sbjct: 162 M 162
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 230 GVEFLQLSTRD--IFDTPDQDKLERGVDFIQR-ISKTGGTVYVHCKAGRTRSATLVGCYL 286
GVE L T D +F P FI R +S + VHC GR+RSATLV YL
Sbjct: 109 GVEADDLPTFDLSVFFYP-------AAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYL 161
Query: 287 M 287
M
Sbjct: 162 M 162
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 72 EWNKVGVEFLQLS---TRDIFDTPDQDKL---ERGVDFIQRISKTGGTVYVHCKAGRTRS 125
E N + F QL DI D P ++ + +FI + GG V VH AG +RS
Sbjct: 45 EANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRS 104
Query: 126 ATLVGCYLMKVTSRRWYD 143
A V Y+M+ ++ D
Sbjct: 105 AAFVIAYIMETFGMKYRD 122
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 225 EWNKVGVEFLQLS---TRDIFDTPDQDKL---ERGVDFIQRISKTGGTVYVHCKAGRTRS 278
E N + F QL DI D P ++ + +FI + GG V VH AG +RS
Sbjct: 45 EANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRS 104
Query: 279 ATLVGCYLMK 288
A V Y+M+
Sbjct: 105 AAFVIAYIME 114
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Query: 114 VYVHCKAGRTRSATLVGCYLMK---VTSRRWYD 143
+ +HC+ G +RSATL+ Y+MK ++ R YD
Sbjct: 120 ILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYD 152
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 267 VYVHCKAGRTRSATLVGCYLMK 288
+ +HC+ G +RSATL+ Y+MK
Sbjct: 120 ILIHCQCGLSRSATLIIAYIMK 141
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 240 DIFDTPDQDKLE---RGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKLE 290
I D P+ + L +FI+ + G V VH AG +R+A +V +LM E
Sbjct: 54 SILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSE 107
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 87 DIFDTPDQDKLE---RGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134
I D P+ + L +FI+ + G V VH AG +R+A +V +LM
Sbjct: 54 SILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLM 104
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 260 ISKTGGTVYVHCKAGRTRSATLVGCYLMKLE 290
+S G V VHC G +RSATLV +LM E
Sbjct: 127 LSVPQGRVLVHCAMGVSRSATLVLAFLMICE 157
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 107 ISKTGGTVYVHCKAGRTRSATLVGCYLM 134
+S G V VHC G +RSATLV +LM
Sbjct: 127 LSVPQGRVLVHCAMGVSRSATLVLAFLM 154
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 260 ISKTGGTVYVHCKAGRTRSATLVGCYLMKLE 290
+S G V VHC G +RSATLV +LM E
Sbjct: 127 LSVPQGRVLVHCAMGVSRSATLVLAFLMIYE 157
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 107 ISKTGGTVYVHCKAGRTRSATLVGCYLM 134
+S G V VHC G +RSATLV +LM
Sbjct: 127 LSVPQGRVLVHCAMGVSRSATLVLAFLM 154
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 100 GVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKVTSRRWYDRID 146
++FI V VHC AG +RS T+ YLM+ D D
Sbjct: 71 AIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYD 117
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 253 GVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 288
++FI V VHC AG +RS T+ YLM+
Sbjct: 71 AIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQ 106
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 103 FIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 135
FI + K G VH K G +RSA+ V Y MK
Sbjct: 73 FISKAKKHGSKCLVHSKMGVSRSASTVIAYAMK 105
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 256 FIQRISKTGGTVYVHCKAGRTRSATLVGCYLMK 288
FI + K G VH K G +RSA+ V Y MK
Sbjct: 73 FISKAKKHGSKCLVHSKMGVSRSASTVIAYAMK 105
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 100 GVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 134
+++I + G V VH +AG +RSAT+ YLM
Sbjct: 70 AIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLM 104
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 253 GVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLM 287
+++I + G V VH +AG +RSAT+ YLM
Sbjct: 70 AIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLM 104
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 245 PDQDKLERGVDFIQRISK-----TGGTVYVHCKAGRTRSATLVGCYLMKLE 290
PD E F + +S T + VHC AG R+ TL+G Y L
Sbjct: 198 PDHGVPESAASFDELLSVIKNCVTTSPILVHCSAGIGRTGTLIGAYAALLH 248
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Query: 92 PDQDKLERGVDFIQRISK-----TGGTVYVHCKAGRTRSATLVGCY 132
PD E F + +S T + VHC AG R+ TL+G Y
Sbjct: 198 PDHGVPESAASFDELLSVIKNCVTTSPILVHCSAGIGRTGTLIGAY 243
>pdb|1WCH|A Chain A, Crystal Structure Of Ptpl1 Human Tyrosine Phosphatase
Mutated In Colorectal Cancer - Evidence For A Second
Phosphotyrosine Substrate Recognition Pocket
Length = 315
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 90 DTPDQ-DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 129
DTP Q D L + +++ I ++G + HC AG RS TL+
Sbjct: 218 DTPSQPDDLLTFISYMRHIHRSG-PIITHCSAGIGRSGTLI 257
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 243 DTPDQ-DKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLV 282
DTP Q D L + +++ I ++G + HC AG RS TL+
Sbjct: 218 DTPSQPDDLLTFISYMRHIHRSG-PIITHCSAGIGRSGTLI 257
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 108 SKTGGTVYVHCKAGRTRSATLVGCY 132
S T V VHC AG R+ TL+G Y
Sbjct: 216 SPTTVPVVVHCSAGIGRTGTLIGAY 240
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 261 SKTGGTVYVHCKAGRTRSATLVGCY 285
S T V VHC AG R+ TL+G Y
Sbjct: 216 SPTTVPVVVHCSAGIGRTGTLIGAY 240
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 37 ALPFKRLTNKLLE---ENVKGVVSMNEDYELYFANGREEW-----NKVGVEFLQLSTRDI 88
LP+ N++LE E VK V+ + ED+E+ + G +++ K G++ L + D
Sbjct: 13 GLPYTE--NEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPD- 69
Query: 89 FDTPDQDKLERGVDFIQRISKTGGTVYVHCKAGRTRSATLVGCYLMKVTSRRWYDRIDE 147
P + + ++ +S+ G + VHC G R+ T++ YL+ IDE
Sbjct: 70 GGVPSDSQFLTIMKWL--LSEKEGNL-VHCVGGIGRTGTILASYLILTEGLEVESAIDE 125
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 114 VYVHCKAGRTRSATLVGCYLMK 135
+ +HCKAG+ R+ TLV +L++
Sbjct: 117 IAIHCKAGKGRTGTLVSSWLLE 138
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 267 VYVHCKAGRTRSATLVGCYLMK 288
+ +HCKAG+ R+ TLV +L++
Sbjct: 117 IAIHCKAGKGRTGTLVSSWLLE 138
>pdb|1XRI|A Chain A, X-ray Structure Of A Putative Phosphoprotein Phosphatase
From Arabidopsis Thaliana Gene At1g05000
pdb|1XRI|B Chain B, X-ray Structure Of A Putative Phosphoprotein Phosphatase
From Arabidopsis Thaliana Gene At1g05000
pdb|2Q47|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of A
Putative Phosphoprotein Phosphatase From Arabidopsis
Thaliana Gene At1g05000
pdb|2Q47|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of A
Putative Phosphoprotein Phosphatase From Arabidopsis
Thaliana Gene At1g05000
Length = 151
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 266 TVYVHCKAGRTRSATLVGCYLMKLE 290
V +HCK G+ R+ LVGC L KL+
Sbjct: 94 PVLIHCKRGKHRTGCLVGC-LRKLQ 117
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 113 TVYVHCKAGRTRSATLVGC 131
V +HCK G+ R+ LVGC
Sbjct: 94 PVLIHCKRGKHRTGCLVGC 112
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 244 TPD--QDKLERGVDFIQ-RISKTG-GTVYVHCKAGRTRS----ATLVGCYLMKLEPV 292
TPD Q L+ +D + R++ G G V VHC AG R+ AT +GC +K E V
Sbjct: 185 TPDSAQPLLQLMLDVEEDRLASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGV 241
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 244 TPD--QDKLERGVDFIQ-RISKTG-GTVYVHCKAGRTRS----ATLVGCYLMKLEPV 292
TPD Q L+ +D + R++ G G V VHC AG R+ AT +GC +K E V
Sbjct: 198 TPDSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGV 254
>pdb|2FHX|A Chain A, Pseudomonas Aeruginosa Spm-1 Metallo-Beta-Lactamase
pdb|2FHX|B Chain B, Pseudomonas Aeruginosa Spm-1 Metallo-Beta-Lactamase
Length = 246
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 154 LPFKRLTNKEDRNNVFMEKVTSRRWYDR-------IDENIILGALPFKRLTNKLLEENV- 205
LP+ K D ++VF+ VT R +Y +D +++ + PF+ L + L + V
Sbjct: 6 LPYNLTATKID-SDVFV--VTDRDFYSSNVLVAKMLDGTVVIVSSPFENLGTQTLMDWVA 62
Query: 206 -----KGVVSMNEDYELYFANGREEWNKVGVE 232
K VV++N + L G E + K+G E
Sbjct: 63 KTMKPKKVVAINTHFHLDGTGGNEIYKKMGAE 94
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,047,491
Number of Sequences: 62578
Number of extensions: 385275
Number of successful extensions: 1183
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1102
Number of HSP's gapped (non-prelim): 82
length of query: 295
length of database: 14,973,337
effective HSP length: 98
effective length of query: 197
effective length of database: 8,840,693
effective search space: 1741616521
effective search space used: 1741616521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)