BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7478
(180 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62257|UBE2H_MOUSE Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2
SV=1
Length = 183
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 52/57 (91%)
Query: 124 SGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180
SGTVCL+VINQ WT LYDL+NIFE+FLPQLL YPNP DPLNGDAAAMYL +P++YK+
Sbjct: 83 SGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQ 139
>sp|P62256|UBE2H_HUMAN Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1
SV=1
Length = 183
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 52/57 (91%)
Query: 124 SGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180
SGTVCL+VINQ WT LYDL+NIFE+FLPQLL YPNP DPLNGDAAAMYL +P++YK+
Sbjct: 83 SGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQ 139
>sp|Q32LN1|UBE2H_BOVIN Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1
Length = 183
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 52/57 (91%)
Query: 124 SGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180
SGTVCL+VINQ WT LYDL+NIFE+FLPQLL YPNP DPLNGDAAAMYL +P++YK+
Sbjct: 83 SGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQ 139
>sp|P42749|UBC5_ARATH Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5
PE=2 SV=2
Length = 185
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 94 VQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQL 153
+++ L + P V + IY+ SG+VCL+VINQ W+P++DL N+FETFLPQL
Sbjct: 51 IRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQL 110
Query: 154 LTYPNPTDPLNGDAAAMYL-DKP 175
L YPNP+DPLNG+AAA+ + D+P
Sbjct: 111 LLYPNPSDPLNGEAAALMMRDRP 133
>sp|P42748|UBC4_ARATH Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4
PE=2 SV=2
Length = 187
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 94 VQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQL 153
+++ L + P V + IY+ SG+VCL+VINQ W+P++DL N+FETFLPQL
Sbjct: 51 IRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQL 110
Query: 154 LTYPNPTDPLNGDAAAMYL-DKP 175
L YPNP+DPLNG+AAA+ + D+P
Sbjct: 111 LLYPNPSDPLNGEAAALMMRDRP 133
>sp|P16577|UBC4_WHEAT Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4
PE=1 SV=1
Length = 184
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 94 VQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQL 153
V++ L + P + + IY+ SG+VCL+VINQ W+P++DL NIFE FLPQL
Sbjct: 51 VRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQL 110
Query: 154 LTYPNPTDPLNGDAAAMYLDKPDKY 178
L YPNP+DPLNG+AA++ + + Y
Sbjct: 111 LLYPNPSDPLNGEAASLMMRDKNAY 135
>sp|Q9P7R4|UBC8_SCHPO Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc8 PE=3 SV=1
Length = 184
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 47/55 (85%)
Query: 124 SGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKY 178
SG+VCL+VINQ W+P++D+ NIFE FLPQLL YPN +DPLNG+AAA+ L +P+ Y
Sbjct: 81 SGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTY 135
>sp|P42750|UBC6_ARATH Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6
PE=2 SV=2
Length = 183
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
P V + IY+ SG VCL+VINQ W+P++DL N+FE+FLPQLL YPNP+DP NG+
Sbjct: 64 PSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGE 123
Query: 167 AAAMYL 172
AA++ +
Sbjct: 124 AASLLM 129
>sp|P28263|UBC8_YEAST Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC8 PE=1 SV=2
Length = 218
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
P + + I++ + SG++CL+VIN W+PLYDL NI E +P LL PN +DPLN +
Sbjct: 64 PSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNE 123
Query: 167 AAAMYLDKPDKYKE 180
AA + L Y+E
Sbjct: 124 AATLQLRDKKLYEE 137
>sp|Q54TI6|UBC12_DICDI NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m
PE=3 SV=1
Length = 230
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V+ ++ H + G VCLN++ Q+W P+ ++ + + L PNP DPLN D
Sbjct: 138 PPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLM-TLFLEPNPDDPLNKD 196
Query: 167 AAAMYLD 173
AA + +D
Sbjct: 197 AAQLMID 203
>sp|P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1
PE=1 SV=1
Length = 152
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ +W+P+YD++ I T + LL PNP P N +
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSE 125
Query: 167 AAAMY 171
AA MY
Sbjct: 126 AARMY 130
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1
SV=1
Length = 152
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ +W+P+YD++ I T + LL PNP P N +
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSE 125
Query: 167 AAAMY 171
AA MY
Sbjct: 126 AARMY 130
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ +W+P+YD++ I T + LL PNP P N +
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSE 125
Query: 167 AAAMY 171
AA M+
Sbjct: 126 AARMF 130
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ +W+P+YD++ I T + LL PNP P N +
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSE 125
Query: 167 AAAMY 171
AA M+
Sbjct: 126 AARMF 130
>sp|Q9Z255|UBE2A_MOUSE Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2
SV=1
Length = 152
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ W+P YD+S+I T + LL PNP P N
Sbjct: 67 PPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNPNSPANSQ 125
Query: 167 AAAMY 171
AA +Y
Sbjct: 126 AAQLY 130
>sp|P49459|UBE2A_HUMAN Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=1
SV=2
Length = 152
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ W+P YD+S+I T + LL PNP P N
Sbjct: 67 PPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNPNSPANSQ 125
Query: 167 AAAMY 171
AA +Y
Sbjct: 126 AAQLY 130
>sp|P63149|UBE2B_RAT Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b
PE=2 SV=1
Length = 152
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ W+P YD+S+I T + LL PNP P N
Sbjct: 67 PPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNPNSPANSQ 125
Query: 167 AAAMY 171
AA +Y
Sbjct: 126 AAQLY 130
>sp|P63148|UBE2B_RABIT Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B
PE=2 SV=1
Length = 152
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ W+P YD+S+I T + LL PNP P N
Sbjct: 67 PPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNPNSPANSQ 125
Query: 167 AAAMY 171
AA +Y
Sbjct: 126 AAQLY 130
>sp|P63147|UBE2B_MOUSE Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1
SV=1
Length = 152
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ W+P YD+S+I T + LL PNP P N
Sbjct: 67 PPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNPNSPANSQ 125
Query: 167 AAAMY 171
AA +Y
Sbjct: 126 AAQLY 130
>sp|P63146|UBE2B_HUMAN Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1
SV=1
Length = 152
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ W+P YD+S+I T + LL PNP P N
Sbjct: 67 PPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNPNSPANSQ 125
Query: 167 AAAMY 171
AA +Y
Sbjct: 126 AAQLY 130
>sp|Q32P99|UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1
Length = 152
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ W+P YD+S+I T + LL PNP P N
Sbjct: 67 PPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNPNSPANSQ 125
Query: 167 AAAMY 171
AA +Y
Sbjct: 126 AAQLY 130
>sp|P52491|UBC12_YEAST NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBC12 PE=1 SV=1
Length = 188
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 91 TLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFL 150
+++ + + V+ P VV I+ H + G VCLN++ ++W+P DL +I L
Sbjct: 79 SINFNLDFNEVYPIEPPKVVCLKKIF-HPNIDLKGNVCLNILREDWSPALDLQSIITGLL 137
Query: 151 PQLLTYPNPTDPLNGDAAAM 170
L PNP DPLN DAA +
Sbjct: 138 -FLFLEPNPNDPLNKDAAKL 156
>sp|P42746|UBC3_ARATH Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3
PE=2 SV=1
Length = 150
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP+V S H + G++CL+++ +W+P+YD++ + T + LL PNP P N +
Sbjct: 67 PPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVL-TSIQSLLCDPNPDSPANAE 125
Query: 167 AAAMY 171
AA ++
Sbjct: 126 AARLF 130
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans
GN=ubc-1 PE=1 SV=1
Length = 192
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G++CL+++ W+P YD++ I T + LL PNP P N
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAIL-TSIQSLLDEPNPNSPANSL 125
Query: 167 AAAMY 171
AA +Y
Sbjct: 126 AAQLY 130
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + G +CL+++ W+P YD+S I T + LL+ PNP P N
Sbjct: 67 PPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAIL-TSIQSLLSDPNPNSPANST 125
Query: 167 AAAMY 171
AA +Y
Sbjct: 126 AAQLY 130
>sp|Q9SDY5|RCE1_ARATH NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1
SV=1
Length = 184
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 125 GTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKY 178
G VCLN++ ++W P+ +++ + L L T PN DPLN DAAA+ D P +
Sbjct: 110 GNVCLNILREDWKPVLNINTVIYG-LFHLFTEPNSEDPLNHDAAAVLRDNPKLF 162
>sp|P06104|UBC2_YEAST Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RAD6 PE=1 SV=1
Length = 172
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 118 HQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDK 177
H + +G +CL+++ WTP YD+++I T + L PNP P N +AA ++ D +
Sbjct: 78 HPNVYANGEICLDILQNRWTPTYDVASIL-TSIQSLFNDPNPASPANVEAATLFKDHKSQ 136
Query: 178 Y 178
Y
Sbjct: 137 Y 137
>sp|Q6CUD9|UBC2_KLULA Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=UBC2 PE=3 SV=1
Length = 164
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 118 HQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDK 177
H + +G +CL+++ WTP YD+++I T + L PNP P N +AA ++ D +
Sbjct: 78 HPNVYANGEICLDILQNRWTPTYDVASIL-TSIQSLFNDPNPASPANVEAATLFQDHKSQ 136
Query: 178 Y 178
Y
Sbjct: 137 Y 137
>sp|Q75EB8|UBC2_ASHGO Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC2
PE=3 SV=1
Length = 170
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 118 HQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDK 177
H + +G +CL+++ WTP YD+++I T + L PNP P N +AA ++ D +
Sbjct: 78 HPNVYANGEICLDILQNRWTPTYDVASIL-TSIQSLFNDPNPASPANVEAATLFKDHKSQ 136
Query: 178 Y 178
Y
Sbjct: 137 Y 137
>sp|Q6FR76|UBC2_CANGA Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC2 PE=3 SV=1
Length = 167
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 118 HQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDK 177
H + +G +CL+++ WTP YD+++I T + L PNP P N +AA ++ D +
Sbjct: 78 HPNVYANGEICLDILQNRWTPTYDVASIL-TSIQSLFNDPNPASPANVEAATLFKDHKSQ 136
Query: 178 Y 178
Y
Sbjct: 137 Y 137
>sp|Q553F3|UBC2_DICDI Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum
GN=ubc2 PE=3 SV=2
Length = 151
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 85 EGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSN 144
EGA T LS+Q + P V + ++ H + G++CL+++ +W+P+YD++
Sbjct: 49 EGA-TFKLSLQ--FSEEYPNDAPTVKFLSKMF-HPNVYADGSICLDILQNQWSPIYDIAA 104
Query: 145 IFETFLPQLLTYPNPTDPLNGDAAAMY 171
I T + LL PNP P N ++A ++
Sbjct: 105 IL-TSIQSLLCDPNPNSPANSESARLF 130
>sp|P0CS16|UBC2_CRYNJ Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=UBC2 PE=3 SV=1
Length = 169
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + +G +CL+++ W+P YD++ I T + LL PNP P N D
Sbjct: 67 PPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAIL-TSVQSLLNDPNPASPANVD 125
Query: 167 AAAMY 171
AA ++
Sbjct: 126 AAQLF 130
>sp|P0CS17|UBC2_CRYNB Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=UBC2 PE=3 SV=1
Length = 169
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + +G +CL+++ W+P YD++ I T + LL PNP P N D
Sbjct: 67 PPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAIL-TSVQSLLNDPNPASPANVD 125
Query: 167 AAAMY 171
AA ++
Sbjct: 126 AAQLF 130
>sp|Q4PFA5|UBC2_USTMA Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=UBC2 PE=3 SV=1
Length = 185
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + +G +CL+++ W+P YD++ I T + LL PNP P N +
Sbjct: 67 PPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAIL-TSIQSLLHDPNPNSPANAE 125
Query: 167 AAAMY 171
AA++Y
Sbjct: 126 AASLY 130
>sp|Q9ZU75|UB12L_ARATH Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis
thaliana GN=RCE2 PE=2 SV=1
Length = 185
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 91 TLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFL 150
S Q+ HE P V +Y H + G VCLN++ ++W P+ +++ + L
Sbjct: 80 VFSFQVSNMYPHE--APKVKCKTKVY-HPNIDLEGNVCLNILREDWKPVLNINTVIYG-L 135
Query: 151 PQLLTYPNPTDPLNGDAAAMYLDKPDKY 178
L T PN DPLN +AAA+ D P +
Sbjct: 136 FHLFTEPNYEDPLNHEAAAVLRDNPKTF 163
>sp|Q6BU36|UBC2_DEBHA Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=UBC2 PE=3 SV=1
Length = 168
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 112 PPSI-----YNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PPS+ H + SG +CL+++ W+P YD+S+I T + LL PN + P N +
Sbjct: 67 PPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSIL-TSIQSLLNDPNISSPANVE 125
Query: 167 AAAMYLDKPDKY 178
AA +Y D +Y
Sbjct: 126 AANLYKDHRSQY 137
>sp|Q6CSW8|UBC12_KLULA NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=UBC12 PE=3 SV=1
Length = 184
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PPVV H + G VCLN++ ++WTP D+ +I L L PN DPLN D
Sbjct: 91 PPVVKCMHRIYHPNIDIDGNVCLNLLREDWTPALDIQSIIIGIL-FLFHEPNGRDPLNKD 149
Query: 167 AAAMYLDKPDKY 178
AA ++ P ++
Sbjct: 150 AAKTLIEDPLRF 161
>sp|Q6C093|UBC2_YARLI Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=UBC2 PE=3 SV=1
Length = 151
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V S H + SG +CL+++ W+P YD++ I T + LL PN + P N +
Sbjct: 67 PPAVKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAIL-TSVQSLLNDPNTSSPANVE 125
Query: 167 AAAMYLDKPDKY 178
A+ +Y D +Y
Sbjct: 126 ASMLYKDHRQQY 137
>sp|O74201|UBC2_CANAL Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=UBC2 PE=2 SV=1
Length = 179
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 118 HQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDK 177
H + SG +CL+++ W+P YD+S+I T + LL PN + P N +AA +Y D
Sbjct: 78 HPNVYASGELCLDILQNRWSPTYDVSSIL-TSVQSLLNDPNISSPANVEAANLYKDHRSL 136
Query: 178 Y 178
Y
Sbjct: 137 Y 137
>sp|Q75AF2|UBC12_ASHGO NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC12
PE=3 SV=2
Length = 184
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP V + H + YSG +CLNV+ ++W+P+ DL + L L PN +DPLN
Sbjct: 91 PPTVKCLNTIYHPNIDYSGNICLNVLREDWSPVMDLQTV-VLGLLFLFLEPNGSDPLNRQ 149
Query: 167 AAAMYLDKPDKY 178
AA L P ++
Sbjct: 150 AADTMLRDPYRF 161
>sp|Q91W82|UB2E2_MOUSE Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2
SV=1
Length = 201
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 26/179 (14%)
Query: 18 KKEEEDEEGGGGEEEEEEEEKKKEEKKKEK---KKKEEEKKKEGEKRRTLTFIRIGK--- 71
++ ++ GG + ++ E ++E +E+ KKKE + + + + + RI K
Sbjct: 6 QRVDDSPSTSGGSSDGDQRESVQQEPDREQVQPKKKEGKISSKTAAKLSTSAKRIQKELA 65
Query: 72 -PALKPRPTRCV--EGEGAPTRTLSVQIPLHRVHEQGV---------------PPVVYPP 113
L P P +G+ ++ P V+E GV P V +
Sbjct: 66 EITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRT 125
Query: 114 SIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYL 172
IY H + G +CL+++ W+P +S + + LLT NP DPL G A Y+
Sbjct: 126 RIY-HCNINSQGVICLDILKDNWSPALTISKVLLSIC-SLLTDCNPADPLVGSIATQYM 182
>sp|Q96LR5|UB2E2_HUMAN Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1
SV=1
Length = 201
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 26/179 (14%)
Query: 18 KKEEEDEEGGGGEEEEEEEEKKKEEKKKEK---KKKEEEKKKEGEKRRTLTFIRIGK--- 71
++ ++ GG + ++ E ++E ++E+ KKKE + + + + + RI K
Sbjct: 6 QRVDDSPSTSGGSSDGDQRESVQQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELA 65
Query: 72 -PALKPRPTRCV--EGEGAPTRTLSVQIPLHRVHEQGV---------------PPVVYPP 113
L P P +G+ ++ P V+E GV P V +
Sbjct: 66 EITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRT 125
Query: 114 SIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYL 172
IY H + G +CL+++ W+P +S + + LLT NP DPL G A Y+
Sbjct: 126 RIY-HCNINSQGVICLDILKDNWSPALTISKVLLSIC-SLLTDCNPADPLVGSIATQYM 182
>sp|P52483|UB2E3_MOUSE Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1
SV=2
Length = 207
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
P V + IY H + G +CL+++ W+P +S + + LLT NP DPL G
Sbjct: 125 PKVTFRTRIY-HCNINSQGVICLDILKDNWSPALTISKVLLSIC-SLLTDCNPADPLVGS 182
Query: 167 AAAMYL 172
A YL
Sbjct: 183 IATQYL 188
>sp|Q969T4|UB2E3_HUMAN Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1
SV=1
Length = 207
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
P V + IY H + G +CL+++ W+P +S + + LLT NP DPL G
Sbjct: 125 PKVTFRTRIY-HCNINSQGVICLDILKDNWSPALTISKVLLSIC-SLLTDCNPADPLVGS 182
Query: 167 AAAMYL 172
A YL
Sbjct: 183 IATQYL 188
>sp|Q2T9X7|UB2E3_BOVIN Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2
SV=1
Length = 207
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
P V + IY H + G +CL+++ W+P +S + + LLT NP DPL G
Sbjct: 125 PKVTFRTRIY-HCNINSQGVICLDILKDNWSPALTISKVLLSIC-SLLTDCNPADPLVGS 182
Query: 167 AAAMYL 172
A YL
Sbjct: 183 IATQYL 188
>sp|P23566|UBC2_SCHPO Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rhp6 PE=1 SV=3
Length = 151
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP+V S H + +G +CL+++ W+P YD++ I T + LL PN P N +
Sbjct: 67 PPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAIL-TSIQSLLNDPNNASPANAE 125
Query: 167 AAAMY 171
AA ++
Sbjct: 126 AAQLH 130
>sp|Q9VTY6|UBE2C_DROME Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih
PE=1 SV=1
Length = 178
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 89 TRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFET 148
T LS+ P + P V + S + H + G +CL+++ +W+ LYD+ I +
Sbjct: 80 TYRLSLDFP--NSYPYAAPVVKFLTSCF-HPNVDLQGAICLDILKDKWSALYDVRTILLS 136
Query: 149 FLPQLLTYPNPTDPLNGDAAAMYLDK 174
+ LL PN PLN AA M+ D+
Sbjct: 137 -IQSLLGEPNNESPLNAQAAMMWNDQ 161
>sp|O00103|UBC11_SCHPO Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc11 PE=3 SV=1
Length = 176
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 107 PPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGD 166
PP + S H + SG +CL+++ +W+ +Y++ I + L LL PN PLN
Sbjct: 92 PPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLS-LQSLLGEPNNASPLNAQ 150
Query: 167 AAAMYLDKPDKYK 179
AA ++ P +YK
Sbjct: 151 AAELWSKDPIEYK 163
>sp|P35133|UBC10_ARATH Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10
PE=1 SV=1
Length = 148
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 118 HQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDK 177
H + +G++CL+++ ++W+P +S + + LLT PNP DPL + A MY +K
Sbjct: 75 HPNINSNGSICLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMYKTDKNK 133
Query: 178 Y 178
Y
Sbjct: 134 Y 134
>sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1
SV=1
Length = 148
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 118 HQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDK 177
H + +G++CL+++ ++W+P +S + + LLT PNP DPL + A MY +K
Sbjct: 75 HPNINSNGSICLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMYKTDKNK 133
Query: 178 Y 178
Y
Sbjct: 134 Y 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.130 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,249,428
Number of Sequences: 539616
Number of extensions: 4273856
Number of successful extensions: 207679
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3777
Number of HSP's successfully gapped in prelim test: 1043
Number of HSP's that attempted gapping in prelim test: 76602
Number of HSP's gapped (non-prelim): 69191
length of query: 180
length of database: 191,569,459
effective HSP length: 110
effective length of query: 70
effective length of database: 132,211,699
effective search space: 9254818930
effective search space used: 9254818930
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 57 (26.6 bits)