Query psy7478
Match_columns 180
No_of_seqs 149 out of 1334
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 19:21:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7478.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7478hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 4.1E-36 1.4E-40 235.4 13.0 111 57-180 29-139 (151)
2 2ayv_A Ubiquitin-conjugating e 100.0 5.6E-36 1.9E-40 238.5 13.0 111 57-180 46-156 (166)
3 1ayz_A UBC2, ubiquitin-conjuga 100.0 5.5E-36 1.9E-40 239.2 12.6 111 57-180 29-139 (169)
4 2r0j_A Ubiquitin carrier prote 100.0 4.1E-36 1.4E-40 234.9 11.4 111 57-180 26-136 (149)
5 1fxt_A Ubiquitin-conjugating e 100.0 3E-36 1E-40 235.5 10.5 110 59-180 29-138 (149)
6 2bep_A Ubiquitin-conjugating e 100.0 8.7E-36 3E-40 235.3 13.2 112 57-180 36-147 (159)
7 2c2v_B Ubiquitin-conjugating e 100.0 3.2E-36 1.1E-40 236.8 10.2 111 57-180 30-140 (154)
8 1z2u_A Ubiquitin-conjugating e 100.0 8.7E-36 3E-40 233.2 12.2 111 57-180 29-139 (150)
9 3h8k_A Ubiquitin-conjugating e 100.0 1.2E-35 4E-40 235.3 13.0 109 59-180 31-152 (164)
10 2aak_A UBC1, ubiquitin conjuga 100.0 1.1E-35 3.9E-40 233.0 12.5 111 57-180 29-139 (152)
11 2c4o_A Ubiquitin-conjugating e 100.0 1.4E-35 4.9E-40 235.9 13.0 111 57-180 44-154 (165)
12 2ucz_A UBC7, ubiquitin conjuga 100.0 1E-35 3.6E-40 236.0 12.2 110 58-180 31-153 (165)
13 2onu_A Ubiquitin-conjugating e 100.0 3.6E-36 1.2E-40 236.3 9.0 113 57-180 24-136 (152)
14 1zdn_A Ubiquitin-conjugating e 100.0 8.4E-36 2.9E-40 235.3 11.1 111 57-180 38-148 (158)
15 2e2c_A Ubiquitin conjugating e 100.0 1.7E-35 5.7E-40 233.0 12.8 110 57-180 34-143 (156)
16 3k9o_A Ubiquitin-conjugating e 100.0 1.7E-35 6E-40 241.6 13.2 111 58-180 34-144 (201)
17 1yh2_A HSPC150 protein similar 100.0 2.6E-35 9E-40 234.9 13.0 111 57-180 29-143 (169)
18 2f4z_A Tgtwinscan_2721 - E2 do 100.0 2.2E-35 7.7E-40 240.4 12.4 111 58-180 71-181 (193)
19 1jat_A Ubiquitin-conjugating e 100.0 9.7E-36 3.3E-40 234.2 9.8 111 57-180 30-140 (155)
20 1yrv_A Ubiquitin-conjugating l 100.0 1.6E-35 5.4E-40 236.6 10.9 112 57-180 48-161 (169)
21 1i7k_A Ubiquitin-conjugating e 100.0 2.4E-35 8.3E-40 237.6 11.6 110 57-180 55-164 (179)
22 2pwq_A Ubiquitin conjugating e 100.0 1.8E-35 6.3E-40 244.6 10.4 112 57-180 48-159 (216)
23 1yf9_A Ubiquitin carrier prote 100.0 1.5E-35 5.2E-40 237.1 9.5 113 57-180 33-145 (171)
24 3bzh_A Ubiquitin-conjugating e 100.0 5.9E-35 2E-39 238.0 13.0 111 57-180 73-183 (194)
25 3rcz_B SUMO-conjugating enzyme 100.0 6.5E-35 2.2E-39 231.7 12.7 108 60-180 43-152 (163)
26 2y9m_A Ubiquitin-conjugating e 100.0 7.1E-35 2.4E-39 233.1 12.6 112 57-180 43-157 (172)
27 1y8x_A Ubiquitin-conjugating e 100.0 6.6E-35 2.2E-39 230.9 12.3 110 57-180 30-139 (160)
28 2awf_A Ubiquitin-conjugating e 100.0 4.1E-35 1.4E-39 234.6 11.1 110 58-180 44-167 (172)
29 2gjd_A Ubiquitin-conjugating e 100.0 7.3E-35 2.5E-39 229.7 11.9 109 59-180 36-146 (157)
30 1wzv_A Ubiquitin-conjugating e 100.0 9.3E-35 3.2E-39 228.4 11.5 110 57-180 30-140 (155)
31 2grr_A Ubiquitin-conjugating e 100.0 1.4E-34 4.8E-39 228.9 12.0 109 59-180 39-149 (161)
32 2nvu_C NEDD8-conjugating enzym 100.0 1.5E-34 5E-39 233.1 11.9 110 57-180 50-159 (180)
33 3e46_A Ubiquitin-conjugating e 100.0 2E-34 6.9E-39 243.3 13.2 111 58-180 86-196 (253)
34 3rz3_A Ubiquitin-conjugating e 100.0 1.9E-34 6.6E-39 232.6 12.0 110 57-179 33-161 (183)
35 1tte_A Ubiquitin-conjugating e 100.0 5.3E-35 1.8E-39 241.7 8.8 110 59-180 30-139 (215)
36 1c4z_D UBCH7, ubiquitin conjug 100.0 3.1E-34 1.1E-38 225.2 11.4 109 57-179 28-137 (154)
37 2z5d_A Ubiquitin-conjugating e 100.0 8.2E-35 2.8E-39 234.6 8.1 110 59-180 48-158 (179)
38 3fn1_B NEDD8-conjugating enzym 100.0 6.6E-34 2.3E-38 226.0 11.8 110 57-180 40-156 (167)
39 3o2u_A NEDD8-conjugating enzym 100.0 1.1E-33 3.6E-38 229.8 12.5 111 56-180 55-168 (190)
40 4ds2_A Ubiquitin-conjugating e 100.0 8.1E-34 2.8E-38 225.8 11.0 112 57-180 45-160 (167)
41 4ddg_A Ubiquitin-conjugating e 100.0 2.5E-32 8.6E-37 242.9 12.3 111 57-180 28-138 (399)
42 2q0v_A Ubiquitin-conjugating e 100.0 2.4E-32 8.1E-37 215.8 5.8 101 60-174 53-156 (156)
43 1jat_B Ubiquitin-conjugating e 100.0 5.8E-32 2E-36 209.0 2.8 99 60-171 38-138 (138)
44 2a4d_A Ubiquitin-conjugating e 100.0 9.9E-31 3.4E-35 207.4 8.6 97 60-168 57-156 (160)
45 2hlw_A Ubiquitin-conjugating e 100.0 1.4E-30 4.8E-35 208.2 6.4 97 60-168 67-166 (170)
46 2fo3_A Ubiquitin-conjugating e 100.0 1.8E-29 6E-34 192.1 10.8 92 57-161 31-123 (125)
47 2h2y_A Ubiquitin-conjugating e 100.0 5.6E-29 1.9E-33 192.1 11.0 90 57-159 45-135 (136)
48 3ceg_A Baculoviral IAP repeat- 100.0 3.4E-29 1.1E-33 217.7 8.9 110 57-179 105-231 (323)
49 2a7l_A Hypothetical ubiquitin- 99.9 7.9E-28 2.7E-32 186.0 10.5 86 57-155 49-136 (136)
50 1zuo_A Hypothetical protein LO 99.9 2.5E-26 8.6E-31 185.9 5.1 94 57-160 55-159 (186)
51 2f4w_A Ubiquitin-conjugating e 99.9 3.2E-25 1.1E-29 179.4 11.3 91 57-162 39-132 (187)
52 2z6o_A UFM1-conjugating enzyme 99.7 2E-18 6.8E-23 137.3 4.7 98 58-173 52-161 (172)
53 3r3q_A Suppressor protein STP2 99.6 5.7E-16 2E-20 122.8 7.2 85 63-161 62-161 (162)
54 3obq_A Tumor susceptibility ge 99.2 1.3E-11 4.3E-16 96.3 7.1 80 59-157 51-140 (146)
55 3kpa_A Probable ubiquitin fold 99.2 2.8E-12 9.6E-17 100.4 0.8 66 62-139 58-131 (168)
56 2ebm_A RWD domain-containing p 82.9 0.83 2.8E-05 33.1 3.0 23 89-113 56-78 (128)
57 3zqs_A E3 ubiquitin-protein li 82.4 4.3 0.00015 32.2 7.2 48 89-154 39-86 (186)
58 2day_A Ring finger protein 25; 81.8 0.81 2.8E-05 33.2 2.5 23 89-113 60-82 (128)
59 2yz0_A Serine/threonine-protei 81.5 1 3.4E-05 33.2 3.0 23 89-113 63-85 (138)
60 2ebk_A RWD domain-containing p 79.9 1.2 4E-05 32.4 2.8 22 89-112 57-78 (128)
61 2daw_A RWD domain containing p 79.0 6.8 0.00023 29.5 7.0 23 89-113 76-98 (154)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 78.5 1.1 3.7E-05 32.8 2.3 22 89-112 64-85 (137)
63 2dax_A Protein C21ORF6; RWD do 75.6 1.8 6.1E-05 32.5 2.8 24 89-114 74-97 (152)
64 2cwb_A Chimera of immunoglobul 20.1 22 0.00075 25.7 0.0 26 154-179 18-43 (108)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=4.1e-36 Score=235.38 Aligned_cols=111 Identities=24% Similarity=0.505 Sum_probs=107.1
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
.++|+++|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.||+++|.++|
T Consensus 29 ~~~nl~~w~~~i~Gp~------~tpyegg---~f~~~i~fp~~YP~--~pP~v~f~t~i~HPnv~-~~G~iCl~iL~~~W 96 (151)
T 4gpr_A 29 VGDDIFHWTATITGPD------DSPYQGG---LFFLDVHFPVDYPF--KAPRVTFMTKVYHPNIN-KNGVICLDILKDQW 96 (151)
T ss_dssp SSSCTTEEEEEEECCS------SSTTTTC---EEEEEEECCTTTTS--SCCEEEESSCCCBTTBC-TTCBBCCGGGTTTC
T ss_pred cCCCceEEEEEEeCCC------CCCcCCC---EEEEEEECCCCCCC--CcceeEEecCcccceEC-CCCEEEcccccCCC
Confidence 3579999999999999 9999999 99999999999999 99999999999999999 69999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|++||.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 97 ~p~~~i~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~ 139 (151)
T 4gpr_A 97 SPALTLSRVLLSI-SSLLTDPNPSDPLDPEVANVLRANKKQFED 139 (151)
T ss_dssp CTTCCHHHHHHHH-HHHHHCCCTTSCSSHHHHHHHHHCHHHHHH
T ss_pred CCCCcHHHHHHHH-HHHhcCCCCCCchhHHHHHHHHHCHHHHHH
Confidence 9999999999999 799999999999999999999999999964
No 2
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=5.6e-36 Score=238.48 Aligned_cols=111 Identities=24% Similarity=0.497 Sum_probs=107.0
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
.++|++.|+++|.||+ +|||+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.|||++|.+.|
T Consensus 46 ~~~nl~~W~~~I~GP~------~TpYegG---~f~l~i~fp~~YP~--~PP~V~F~T~i~HPNI~-~~G~ICL~iL~~~W 113 (166)
T 2ayv_A 46 VGDDMFHWQATIMGPE------DSPYSGG---VFFLNIHFPSDYPF--KPPKVNFTTKIYHPNIN-SQGAICLDILKDQW 113 (166)
T ss_dssp CSSCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEECSCCCBTTBC-TTCBBCCGGGTTTC
T ss_pred cCCCcceeeEEEECCC------CCCcCCC---EEEEEEeCCCcCCC--CCceeeeccCCcCCcCC-CCCeEEcccccccC
Confidence 4679999999999999 9999998 99999999999999 99999999999999999 69999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 114 sP~~ti~~vL~sI-~sll~~pn~~~Pln~~aa~l~~~d~~~f~~ 156 (166)
T 2ayv_A 114 SPALTISKVLLSI-SSLLTDPNPDDPLVPEIAHLYKSDRMRYDQ 156 (166)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCTTSCSCHHHHHHHHHCHHHHHH
T ss_pred CCCCcHHHHHHHH-HHHHhCCCCCchhhHHHHHHHHHCHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 3
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=5.5e-36 Score=239.17 Aligned_cols=111 Identities=23% Similarity=0.469 Sum_probs=106.6
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|++.|+++|+||+ +|+|+|| +|+|.|.||.+||+ +||+|+|.|+||||||+ .+|.|||++|.+.|
T Consensus 29 ~~~nl~~W~~~I~GP~------~tpYegG---~f~l~i~fp~~YP~--~PP~v~F~t~i~HPNI~-~~G~ICl~iL~~~W 96 (169)
T 1ayz_A 29 LPDNVMVWNAMIIGPA------DTPYEDG---TFRLLLEFDEEYPN--KPPHVKFLSEMFHPNVY-ANGEICLDILQNRW 96 (169)
T ss_dssp ETTEEEEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESSCCCCTTBC-TTSBBCCGGGTTTC
T ss_pred cCCccccceEEEECCC------CCCcCCC---EEEEEEECcccCCC--CCCccccccCCccCCCC-CCCeEeehhhccCC
Confidence 3578999999999999 9999998 99999999999999 99999999999999999 59999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 97 sP~~~i~~vL~si-~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~ 139 (169)
T 1ayz_A 97 TPTYDVASILTSI-QSLFNDPNPASPANVEAATLFKDHKSQYVK 139 (169)
T ss_dssp CTTCCHHHHHHHH-HHHHTCCCCSSCSSHHHHHHHHHCHHHHHH
T ss_pred CCcCcHHHHHHHH-HHHHhCCCCCcHHHHHHHHHHHHCHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 4
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=4.1e-36 Score=234.94 Aligned_cols=111 Identities=23% Similarity=0.463 Sum_probs=106.7
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.||+++|.+.|
T Consensus 26 ~~~~l~~w~~~i~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~-~~G~iCl~iL~~~W 93 (149)
T 2r0j_A 26 VPENYRHFNILINGPD------GTPYEGG---TYKLELFLPEQYPM--EPPKVRFLTKIYHPNID-KLGRICLDILKDKW 93 (149)
T ss_dssp ETTEEEEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEECSCCCBTTBC-TTCBBCCGGGTTTC
T ss_pred CCCcccEEEEEEECCC------CCCcCCC---EEEEEEeCCcccCC--CCCeeEeccCCccCCCC-CCCEEechhcCCCC
Confidence 4578999999999999 9999998 99999999999999 99999999999999999 58999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|++||.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 94 ~p~~~i~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~ 136 (149)
T 2r0j_A 94 SPALQIRTVLLSI-QALLSSPEPDDPLDSKVAEHFKQDKNDAEH 136 (149)
T ss_dssp CTTSCHHHHHHHH-HHHHHSCCTTSCSSCHHHHHHHHCHHHHHH
T ss_pred CCCCcHHHHHHHH-HHHHhCCCCCCchhHHHHHHHHHCHHHHHH
Confidence 9999999999999 799999999999999999999999999963
No 5
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=3e-36 Score=235.53 Aligned_cols=110 Identities=21% Similarity=0.528 Sum_probs=105.6
Q ss_pred CCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCCCC
Q psy7478 59 EKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWTP 138 (180)
Q Consensus 59 ~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~WsP 138 (180)
+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.||+++|.++|+|
T Consensus 29 ~~l~~w~~~I~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPni~~~~G~iCl~iL~~~W~p 97 (149)
T 1fxt_A 29 SDIHHLKGTFLGPP------GTPYEGG---KFVVDIEVPMEYPF--KPPKMQFDTKVYHPNISSVTGAICLDILKNAWSP 97 (149)
T ss_dssp SCSSEEEEEEECCS------SSTTCSS---EEEEEEECCTTTTS--SCCEEEESSCCCBTTBCSSSCCBCCHHHHTSCCT
T ss_pred CCceEEEEEEECCC------CCCcCCc---EEEEEEECCCCCCC--CCCEEEEeCCCccCCCcCCCCeEeCCcCCCCCCC
Confidence 38999999999999 9999998 99999999999999 9999999999999999954999999999999999
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 139 LYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 139 ~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
++||.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 98 ~~~i~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~ 138 (149)
T 1fxt_A 98 VITLKSALISL-QALLQSPEPNDPQDAEVAQHYLRDRESFNK 138 (149)
T ss_dssp TCCHHHHHHHH-HHHHHSCCSSSCSSHHHHHHHHHCSSHHHH
T ss_pred CCcHHHHHHHH-HHHHhCCCCCCcccHHHHHHHHHCHHHHHH
Confidence 99999999999 699999999999999999999999999963
No 6
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=8.7e-36 Score=235.32 Aligned_cols=112 Identities=23% Similarity=0.455 Sum_probs=107.2
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ .||+|+|.|+||||||+..+|.|||++|.++|
T Consensus 36 ~~~~l~~w~~~i~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPni~~~~G~iCl~iL~~~W 104 (159)
T 2bep_A 36 VDENFTELRGEIAGPP------DTPYEGG---RYQLEIKIPETYPF--NPPKVRFITKIWHPNISSVTGAICLDILKDQW 104 (159)
T ss_dssp CSSSSSEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEESSCCCBTTBCTTTCBBCCGGGTTTC
T ss_pred CCCchheEEEEEECCC------CCCccCC---EEEEEEeCCCcCCC--CCCEEEeeCCCCccCCCCCCCEEeChhhhccC
Confidence 3568999999999999 9999998 99999999999999 99999999999999999669999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 105 ~p~~~i~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~ 147 (159)
T 2bep_A 105 AAAMTLRTVLLSL-QALLAAAEPDDPQDAVVANQYKQNPEMFKQ 147 (159)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCTTSCSCHHHHHHHHHCHHHHHH
T ss_pred CCCCcHHHHHHHH-HHHHhCCCCCCcccHHHHHHHHHCHHHHHH
Confidence 9999999999999 799999999999999999999999999963
No 7
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.2e-36 Score=236.83 Aligned_cols=111 Identities=24% Similarity=0.488 Sum_probs=104.6
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|+++|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.|||++|.+.|
T Consensus 30 ~~~~l~~w~~~i~GP~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~-~~G~iCl~iL~~~W 97 (154)
T 2c2v_B 30 DESNARYFHVVIAGPQ------DSPFEGG---TFKLELFLPEEYPM--AAPKVRFMTKIYHPNVD-KLGRICLDILKDKW 97 (154)
T ss_dssp CSSCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEECSCCCCTTBC-TTCBBCCHHHHTSC
T ss_pred CCCchheEEEEEECCC------CCCcCCC---eEEEEEEcCCCCCC--CCCEEEeecCcccCcCc-cCCeEEchhccCCC
Confidence 3569999999999999 9999998 99999999999999 99999999999999999 68999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 98 ~p~~~i~~vl~~i-~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~ 140 (154)
T 2c2v_B 98 SPALQIRTVLLSI-QALLSAPNPDDPLANDVAEQWKTNEAQAIE 140 (154)
T ss_dssp CTTCCHHHHHHHH-HHHTTSCCCCCC--CHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHH-HHHHhCCCCCCcccHHHHHHHHHCHHHHHH
Confidence 9999999999999 799999999999999999999999999963
No 8
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=8.7e-36 Score=233.15 Aligned_cols=111 Identities=24% Similarity=0.532 Sum_probs=106.7
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
.++|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.||+++|.+.|
T Consensus 29 ~~~~l~~w~~~i~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~-~~G~iCl~iL~~~W 96 (150)
T 1z2u_A 29 VGDDLFHWQATIMGPP------ESPYQGG---VFFLTIHFPTDYPF--KPPKVAFTTRIYHPNIN-SNGSICLDILRSQW 96 (150)
T ss_dssp ETTEEEEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEESSCCCBTTBC-TTCBBCCGGGTTTC
T ss_pred CCCcceEEEEEEECCC------CCCcCCC---EEEEEEECCCCCCC--CCcEEEEecCcccCcCC-CCCeEeeccccCCC
Confidence 3579999999999999 9999998 99999999999999 99999999999999999 69999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 97 ~p~~~i~~vl~~i-~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~ 139 (150)
T 1z2u_A 97 SPALTISKVLLSI-CSLLCDPNPDDPLVPEIARIYKTDRERYNQ 139 (150)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCTTSCSCHHHHHHHHHCHHHHHH
T ss_pred CCCCCHHHHHHHH-HHHhhCCCCCCccCHHHHHHHHHHHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 9
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.2e-35 Score=235.34 Aligned_cols=109 Identities=19% Similarity=0.397 Sum_probs=105.2
Q ss_pred CCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCC-----
Q psy7478 59 EKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVIN----- 133 (180)
Q Consensus 59 ~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~----- 133 (180)
+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.||+++|.
T Consensus 31 ~nl~~w~~~I~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPNV~-~~G~iCl~iL~~~~~~ 98 (164)
T 3h8k_A 31 ENFFEWEALIMGPE------DTCFEFG---VFPAILSFPLDYPL--SPPKMRFTCEMFHPNIY-PDGRVCISILHAPGDD 98 (164)
T ss_dssp TCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEECSCCCCTTBC-TTSBBCCGGGSCSCSC
T ss_pred CCccEEEEEEeCCC------CCCCCCC---EEEEEEECCCCCCC--CCCEEEEcCCCccCCCC-CCCcEeeecccCcccc
Confidence 49999999999999 9999999 99999999999999 99999999999999999 69999999996
Q ss_pred --------CCCCCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 134 --------QEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 134 --------e~WsP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+.|+|++||.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 99 ~~~~~~~~~~W~p~~ti~~vL~~i-~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~ 152 (164)
T 3h8k_A 99 PMGYESSAERWSPVQSVEKILLSV-VSMLAEPNDESGANVDASKMWRDDREQFYK 152 (164)
T ss_dssp CCSCCTTCCCCCTTCCHHHHHHHH-HHHHHSCCCSSCSSHHHHHHHHHCHHHHHH
T ss_pred cccccccccCCCCCCcHHHHHHHH-HHHHcCCCCCCccCHHHHHHHHHCHHHHHH
Confidence 7899999999999999 699999999999999999999999999963
No 10
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.1e-35 Score=232.96 Aligned_cols=111 Identities=25% Similarity=0.530 Sum_probs=106.6
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ .||+|+|.|+||||||+ .+|.||+++|.+.|
T Consensus 29 ~~~~l~~w~~~i~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~-~~G~iCl~iL~~~W 96 (152)
T 2aak_A 29 QDNNIMLWNAVIFGPD------DTPWDGG---TFKLSLQFSEDYPN--KPPTVRFVSRMFHPNIY-ADGSICLDILQNQW 96 (152)
T ss_dssp ETTEEEEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESSCCCCTTBC-TTSBBCCGGGTTSC
T ss_pred CCCCccEEEEEEeCCC------CCCccCC---EEEEEEECCCCCCC--CCCEEEEecCcccCCCC-CCCEEechhhcCCC
Confidence 3578999999999999 9999998 99999999999999 99999999999999999 59999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||.+| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 97 ~p~~~i~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~ 139 (152)
T 2aak_A 97 SPIYDVAAILTSI-QSLLCDPNPNSPANSEAARMYSESKREYNR 139 (152)
T ss_dssp CTTCCHHHHHHHH-HHHHTSCCTTSCSSHHHHHHHHHCHHHHHH
T ss_pred CCCCcHHHHHHHH-HHHHhCCCCCccccHHHHHHHHHCHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 11
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.4e-35 Score=235.86 Aligned_cols=111 Identities=24% Similarity=0.506 Sum_probs=106.9
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
.++|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.||+++|.+.|
T Consensus 44 ~~~nl~~W~~~I~GP~------~TpYegg---~f~l~i~fp~~YP~--~PP~v~F~T~i~HPnV~-~~G~ICl~iL~~~W 111 (165)
T 2c4o_A 44 VGDDMFHWQATIMGPN------DSPYQGG---VFFLTIHFPTDYPF--KPPKVAFTTRIYHPNIN-SNGSICLDILRSQW 111 (165)
T ss_dssp SSSCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEECSCCCBTTBC-TTCBBCCGGGTTTC
T ss_pred cCCCcceeEEEEECCC------CCCccCc---eEEEEEECCCcCCC--CCCEEEEecCCcCCcCC-CCCeEeehhhcCCC
Confidence 4579999999999999 9999998 99999999999999 99999999999999999 69999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 112 ~P~~ti~~vL~si-~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~ 154 (165)
T 2c4o_A 112 SPALTISKVLLSI-CSLLCDPNPDDPLVPEIARIYKTDREKYNR 154 (165)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCTTSCSSHHHHHHHHHCHHHHHH
T ss_pred CCcCcHHHHHHHH-HHHHhCCCCCccccHHHHHHHHHHHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 12
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1e-35 Score=235.97 Aligned_cols=110 Identities=18% Similarity=0.366 Sum_probs=105.4
Q ss_pred CCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccC-----
Q psy7478 58 GEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVI----- 132 (180)
Q Consensus 58 g~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l----- 132 (180)
.+|++.|+++|+||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.|||++|
T Consensus 31 ~~~l~~w~~~i~GP~------~tpYegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPNv~-~~G~iCl~iL~~~~~ 98 (165)
T 2ucz_A 31 ENNIFIWDCLIQGPP------DTPYADG---VFNAKLEFPKDYPL--SPPKLTFTPSILHPNIY-PNGEVCISILHSPGD 98 (165)
T ss_dssp SSCCSEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESSCCSCTTBC-TTSBBCCGGGSCCCS
T ss_pred CCCccEEEEEEECCC------CCCccCc---EEEEEEECCccCCC--CCCEEEEeCCCccCCCC-CCCcEeehhhCCccc
Confidence 369999999999999 9999998 99999999999999 99999999999999999 5999999999
Q ss_pred --------CCCCCCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 133 --------NQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 133 --------~e~WsP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
.+.|+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 99 ~~~~~~~~~~~W~p~~~i~~vL~si-~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~ 153 (165)
T 2ucz_A 99 DPNMYELAEERWSPVQSVEKILLSV-MSMLSEPNIESGANIDACILWRDNRPEFER 153 (165)
T ss_dssp CTTSTTTTTTSCCTTCCHHHHHHHH-HHHHHSCCGGGCCCHHHHHHHHTTHHHHHH
T ss_pred cccccCCCCCCCCCcCcHHHHHHHH-HHHHhCCCCCCchhHHHHHHHHHCHHHHHH
Confidence 67899999999999999 699999999999999999999999999963
No 13
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=3.6e-36 Score=236.34 Aligned_cols=113 Identities=39% Similarity=0.704 Sum_probs=107.6
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.||+++|.+.|
T Consensus 24 ~~~~l~~w~~~i~Gp~------~tpyegg---~f~~~i~fp~~YP~--~pP~v~f~t~i~HPni~~~~G~iCl~il~~~W 92 (152)
T 2onu_A 24 NNGSTQDFDVMFHGPN------GTAYEGG---IWKVHVTLPDDYPF--ASPSIGFMNKLLHPNVDEASGSVCLDVINQTW 92 (152)
T ss_dssp ETTEEEEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESSCCCCTTBCTTTCBBCHHHHHHHC
T ss_pred ccCccceEEEEEECCC------CCcccce---EEEEEEcCcccCCC--CCCeEEEecCCccCcCcCcCCeEecccccccC
Confidence 4579999999999999 9999998 99999999999999 99999999999999999659999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++|+++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 93 ~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~ 136 (152)
T 2onu_A 93 TPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEE 136 (152)
T ss_dssp CTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHH
Confidence 99999999999966899999999999999999999999999963
No 14
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.4e-36 Score=235.31 Aligned_cols=111 Identities=21% Similarity=0.371 Sum_probs=106.7
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ .||+|+|.|+||||||+ .+|.||+++|.+.|
T Consensus 38 ~~~~l~~w~~~i~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~-~~G~iCl~iL~~~W 105 (158)
T 1zdn_A 38 NEEDLTDLQVTIEGPE------GTPYAGG---LFRMKLLLGKDFPA--SPPKGYFLTKIFHPNVG-ANGEICVNVLKRDW 105 (158)
T ss_dssp CSSCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESSCCCCTTBC-TTSBBCHHHHTTTC
T ss_pred CCCChhheeEEEECCC------CCCccCc---EEEEEEEcCCCCCC--CCCEEEeccCcccCCCC-CCCEEehhhcCCCC
Confidence 4579999999999999 9999998 99999999999999 99999999999999999 58999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 106 ~p~~~i~~vL~~i-~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~ 148 (158)
T 1zdn_A 106 TAELGIRHVLLTI-KCLLIHPNPESALNEEAGRLLLENYEEYAA 148 (158)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCGGGCSSHHHHHHHHHCHHHHHH
T ss_pred CCCCcHHHHHHHH-HHHHhCCCCCCcccHHHHHHHHHCHHHHHH
Confidence 9999999999999 799999999999999999999999999963
No 15
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-35 Score=233.03 Aligned_cols=110 Identities=25% Similarity=0.482 Sum_probs=105.7
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
.++|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.|||++|.+.|
T Consensus 34 ~~~~l~~w~~~i~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~-~~G~iCl~iL~~~W 101 (156)
T 2e2c_A 34 DGDNLFKWVATLDGPK------DTVYESL---KYKLTLEFPSDYPY--KPPVVKFTTPCWHPNVD-QSGNICLDILKENW 101 (156)
T ss_dssp SSSCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEESSCCCBTTBC-TTCBBCCGGGTTTC
T ss_pred CCCCccEEEEEEECCC------CCCcCCc---EEEEEEECCCCCCC--CCCEEEEeCCcccCCCc-cCceEECccccccC
Confidence 4679999999999999 9999998 99999999999999 99999999999999999 59999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+| +|++.|.+
T Consensus 102 ~p~~~i~~vL~si-~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~ 143 (156)
T 2e2c_A 102 TASYDVRTILLSL-QSLLGEPNNASPLNAQAADMW-SNQTEYKK 143 (156)
T ss_dssp CTTCCHHHHHHHH-HHHTTSCCCSSCSCHHHHHHT-TCHHHHHH
T ss_pred CCCCcHHHHHHHH-HHHHhCCCCCCHHHHHHHHHh-cCHHHHHH
Confidence 9999999999999 699999999999999999999 89999963
No 16
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.7e-35 Score=241.61 Aligned_cols=111 Identities=23% Similarity=0.465 Sum_probs=107.1
Q ss_pred CCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCCC
Q psy7478 58 GEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWT 137 (180)
Q Consensus 58 g~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~Ws 137 (180)
.+|++.|+++|.||+ +|||+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.||+++|.+.|+
T Consensus 34 ~~nl~~w~~~i~Gp~------~tpyegg---~f~~~i~fp~~YP~--~pP~v~f~t~i~HPnv~~~~G~iCl~iL~~~W~ 102 (201)
T 3k9o_A 34 DENFTELRGEIAGPP------DTPYEGG---RYQLEIKIPETYPF--NPPKVRFITKIWHPNISSVTGAICLDILKDQWA 102 (201)
T ss_dssp STTSSEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCC
T ss_pred CCCccEEEEEEECCC------CCCCCCC---EEEEEEECCCcCCC--CCCccccccCcccCCCcCCCCeeeCcccccCCC
Confidence 579999999999999 9999999 99999999999999 999999999999999996699999999999999
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 138 PLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 138 P~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
|++||.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 103 p~~~i~~vL~~i-~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~ 144 (201)
T 3k9o_A 103 AAMTLRTVLLSL-QALLAAAEPDDPQDAVVANQYKQNPEMFKQ 144 (201)
T ss_dssp TTCCHHHHHHHH-HHHHHSCCTTSCSCHHHHHHHHHCHHHHHH
T ss_pred CCCCHHHHHHHH-HHHhcCCCCCCcccHHHHHHHHHCHHHHHH
Confidence 999999999999 799999999999999999999999999963
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-35 Score=234.90 Aligned_cols=111 Identities=22% Similarity=0.442 Sum_probs=106.5
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCC---
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVIN--- 133 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~--- 133 (180)
..+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.|||++|.
T Consensus 29 ~~~~l~~w~~~I~GP~------~tpYegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPNv~-~~G~iCl~iL~~~~ 96 (169)
T 1yh2_A 29 DKDQMDDLRAQILGGA------NTPYEKG---VFKLEVIIPERYPF--EPPQIRFLTPIYHPNID-SAGRICLDVLKLPP 96 (169)
T ss_dssp SSSCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEESSCCCBTTBC-TTCBBCCGGGSCTT
T ss_pred CCCchheEEEEEECCC------CCCccCC---EEEEEEEeCCCCCC--CCcEEEeecCCccccCC-cCCeEecccccCCc
Confidence 3579999999999999 9999998 99999999999999 99999999999999999 79999999998
Q ss_pred -CCCCCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 134 -QEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 134 -e~WsP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+.|+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 97 ~~~W~p~~~i~~vL~si-~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~ 143 (169)
T 1yh2_A 97 KGAWRPSLNIATVLTSI-QLLMSEPNPDDPLMADISSEFKYNKPAFLK 143 (169)
T ss_dssp TSCCCTTSCHHHHHHHH-HHHHHSCCTTSCSCHHHHHHHHHCHHHHHH
T ss_pred ccCCCCCCcHHHHHHHH-HHHHhCCCCcchHhHHHHHHHHhhHHHHHH
Confidence 8999999999999999 799999999999999999999999999963
No 18
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-35 Score=240.36 Aligned_cols=111 Identities=22% Similarity=0.430 Sum_probs=106.8
Q ss_pred CCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCCC
Q psy7478 58 GEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWT 137 (180)
Q Consensus 58 g~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~Ws 137 (180)
.+|++.|+++|+||+ +|||+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.|||++|.+.|+
T Consensus 71 ~~nl~~W~~~I~GP~------~TpYegG---~f~l~i~fp~~YP~--~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~Ws 139 (193)
T 2f4z_A 71 GGDIHRWRGFIAGPL------GTPYEGG---HFTLDIVIPPDYPY--NPPKMKFVTKIWHPNISSQTGAICLDILKHEWS 139 (193)
T ss_dssp TTEEEEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCC
T ss_pred CCCcceEEEEEeCCC------CCCcCCC---EEEEEEECCCcCCC--CCCeEEEecCCccCCCcCCCCEEECccccccCC
Confidence 478999999999999 9999998 99999999999999 999999999999999996699999999999999
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 138 PLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 138 P~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 140 P~~ti~~vL~sI-~sll~~pnp~~P~n~~aa~l~~~d~~~f~~ 181 (193)
T 2f4z_A 140 PALTIRTALLSI-QAMLADPVPTDPQDAEVAKMMIENHPLFVQ 181 (193)
T ss_dssp TTSCHHHHHHHH-HHHHHSCCTTSCSCHHHHHHHHHCHHHHHH
T ss_pred CCCCHHHHHHHH-HHHHhCCCCCCcccHHHHHHHHHCHHHHHH
Confidence 999999999999 699999999999999999999999999963
No 19
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=9.7e-36 Score=234.16 Aligned_cols=111 Identities=23% Similarity=0.439 Sum_probs=107.0
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
.++|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.|||++|.+.|
T Consensus 30 ~~~~l~~w~~~I~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~-~~G~iCl~iL~~~W 97 (155)
T 1jat_A 30 HDDNLRYFQVTIEGPE------QSPYEDG---IFELELYLPDDYPM--EAPKVRFLTKIYHPNID-RLGRICLDVLKTNW 97 (155)
T ss_dssp ETTEEEEEEEEEECCT------TSTTTTE---EEEEEEECCTTTTT--SCCEEEECSCCCBTTBC-TTCCBCCGGGTTTC
T ss_pred CCCchhEEEEEEECCC------CCCccCc---EEEEEEEcCCCCCC--CCCcceeecccccCCCC-CCCEEEchhhccCC
Confidence 4579999999999999 9999998 99999999999999 99999999999999999 79999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 98 ~p~~~i~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~ 140 (155)
T 1jat_A 98 SPALQIRTVLLSI-QALLASPNPNDPLANDVAEDWIKNEQGAKA 140 (155)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCTTSTTCCTTHHHHHHCHHHHHH
T ss_pred CCCCCHHHHHHHH-HHHHhCCCCCCcccHHHHHHHHHCHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 20
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-35 Score=236.58 Aligned_cols=112 Identities=18% Similarity=0.316 Sum_probs=106.5
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCC--C
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVIN--Q 134 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~--e 134 (180)
..+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.||+++|. +
T Consensus 48 ~~~nl~~W~~~I~GP~------~TpYegG---~f~l~i~fp~~YP~--~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~~ 116 (169)
T 1yrv_A 48 VSEDMMEWEVEIEGLQ------NSVWQGL---VFQLTIHFTSEYNY--APPVVKFITIPFHPNVDPHTGQPCIDFLDNPE 116 (169)
T ss_dssp CSTTSCEEEEEEECCT------TSTTTTC---EEEEEEECCTTBTT--BCCEEEESSCCCCTTBCTTTCCBCCHHHHCGG
T ss_pred cCCccccceeEEECCC------CCCccce---EEEEEEECCccCCC--CCCcceecCCCccCcccCCCCeEeehhhcCCc
Confidence 3579999999999999 9999998 99999999999999 99999999999999994379999999998 8
Q ss_pred CCCCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 135 EWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 135 ~WsP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
.|+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 117 ~WsP~~ti~~vL~sI-~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~ 161 (169)
T 1yrv_A 117 KWNTNYTLSSILLAL-QVMLSNPVLENPVNLEAARILVKDESLYRT 161 (169)
T ss_dssp GCCTTCCHHHHHHHH-HHHHTSCCTTSCSCHHHHHHHHSCHHHHHH
T ss_pred CCCCcCCHHHHHHHH-HHHHhCCCCCCchhHHHHHHHHHCHHHHHH
Confidence 999999999999999 699999999999999999999999999963
No 21
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-35 Score=237.58 Aligned_cols=110 Identities=25% Similarity=0.442 Sum_probs=105.7
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
.++|++.|+++|+||+ +|+|+|| +|+|.|.||++||+ .||+|+|.|+||||||+ .+|.|||++|.+.|
T Consensus 55 ~~~nl~~W~~~I~GP~------~TpYegG---~f~l~i~fp~~YP~--~PP~V~F~T~i~HPNV~-~~G~ICL~iL~~~W 122 (179)
T 1i7k_A 55 ESDNLFKWVGTIHGAA------GTVYEDL---RYKLSLEFPSGYPY--NAPTVKFLTPCYHPNVD-TQGNISLDILKEKW 122 (179)
T ss_dssp ETTEEEEEEEEEEBCT------TSTTBTC---EEEEEEECCTTTTT--SCCEEEESSCCCSTTBC-TTCBBCCGGGTTTC
T ss_pred cCCcccccEEEEECCC------CCCcCCC---EEEEEEECCCcCCC--CCceEEEecCCccCccc-cCCeEEcccCcCcC
Confidence 4579999999999999 9999998 99999999999999 99999999999999999 59999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+| +|++.|.+
T Consensus 123 sP~~ti~~vL~sI-~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~ 164 (179)
T 1i7k_A 123 SALYDVRTILLSI-QSLLGEPNIDSPLNTHAAELW-KNPTAFKK 164 (179)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCTTSCSCHHHHHHT-TSHHHHHH
T ss_pred CCCCCHHHHHHHH-HHHHhCCCCcchhhHHHHHHh-hCHHHHHH
Confidence 9999999999999 699999999999999999999 99999963
No 22
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.8e-35 Score=244.61 Aligned_cols=112 Identities=22% Similarity=0.428 Sum_probs=107.1
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|++.|+++|.||+ +|||+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.|||++|.+.|
T Consensus 48 ~~~nl~~W~~~I~GP~------~TpYegG---~f~l~i~fP~~YP~--~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~W 116 (216)
T 2pwq_A 48 KDSNFFEWVGFIKGPE------GTPYEGG---HFTLAITIPNDYPY--NPPKIKFVTKIWHPNISSQTGAICLDVLKNEW 116 (216)
T ss_dssp CSSCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEESSCCCBTTBCTTTCBBCCHHHHHHC
T ss_pred cCCccceeEEEEeCCC------CCCccce---EEEEEEECCCcCCC--CCCcccccCCCcCCCCcCCCCEEEchhhcccC
Confidence 3568999999999999 9999998 99999999999999 99999999999999999668999999999899
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|++||.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 117 sP~~ti~~VL~sI-~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~ 159 (216)
T 2pwq_A 117 SPALTIRTALLSI-QALLSDPQPDDPQDAEVAKMYKENHALFVK 159 (216)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCTTSCSCHHHHHHHHHCHHHHHH
T ss_pred CCCCcHHHHHHHH-HHHHhCCCCCCcccHHHHHHHHHCHHHHHH
Confidence 9999999999999 799999999999999999999999999963
No 23
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-35 Score=237.07 Aligned_cols=113 Identities=37% Similarity=0.585 Sum_probs=108.1
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|++.|+++|+||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.||+++|.+.|
T Consensus 33 ~~~~l~~w~~~I~GP~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~F~t~i~HPNi~~~~G~iCl~iL~~~W 101 (171)
T 1yf9_A 33 PSDTVAEFWVEFKGPE------GTPYEDG---TWMLHVQLPSDYPF--KSPSIGFCNRILHPNVDERSGSVCLDVINQTW 101 (171)
T ss_dssp ECSSTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESSCCCBTTBCTTTCBBCHHHHHHHC
T ss_pred CCCCceEEEEEEECCC------CCCccCc---eEEEEEEcCCCCCC--CCCeEEeecCcccccCcccCCeEeccccccCC
Confidence 4679999999999999 9999998 99999999999999 99999999999999999559999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++|+++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 102 ~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~ 145 (171)
T 1yf9_A 102 TPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDA 145 (171)
T ss_dssp CTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHH
Confidence 99999999999987799999999999999999999999999963
No 24
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=5.9e-35 Score=237.97 Aligned_cols=111 Identities=24% Similarity=0.473 Sum_probs=106.8
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
.++|+++|+++|+||+ +|+|+|| +|+|.|.||++||+ .||.|+|.|+||||||+ .+|.|||++|.+.|
T Consensus 73 ~~~nl~~W~~~I~GP~------~TpYegG---~f~l~i~fp~~YP~--~PP~V~F~T~i~HPNV~-~~G~ICL~iL~~~W 140 (194)
T 3bzh_A 73 KGDNIYEWRSTILGPP------GSVYEGG---VFFLDITFTPEYPF--KPPKVTFRTRIYHCNIN-SQGVICLDILKDNW 140 (194)
T ss_dssp SSSCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESSCCCBTTBC-TTCBBCCGGGTTTC
T ss_pred ccCccccceEEEeCCC------CCCccCC---EEEEEEECCCcCCC--CCccccccCCCccceEC-CCCceechhhhccC
Confidence 3579999999999999 9999998 99999999999999 99999999999999999 69999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 141 sP~~ti~~vL~sI-~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~ 183 (194)
T 3bzh_A 141 SPALTISKVLLSI-CSLLTDCNPADPLVGSIATQYMTNRAEHDR 183 (194)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCTTSCSCHHHHHHHHHCHHHHHH
T ss_pred CCcCcHHHHHHHH-HHHHhCCCCccchhHHHHHHHHHCHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 25
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=6.5e-35 Score=231.74 Aligned_cols=108 Identities=25% Similarity=0.450 Sum_probs=104.2
Q ss_pred CccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCC--CCC
Q psy7478 60 KRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQ--EWT 137 (180)
Q Consensus 60 nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e--~Ws 137 (180)
|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ .||+|+|.|+||||||+ .+|.||+++|.. +|+
T Consensus 43 nl~~W~~~I~Gp~------~Tpyegg---~f~l~i~fp~~YP~--~pP~v~F~t~i~HPnV~-~~G~iCl~iL~~~~~W~ 110 (163)
T 3rcz_B 43 DLMNWKVGIPGKP------KTSWEGG---LYKLTMAFPEEYPT--RPPKCRFTPPLFHPNVY-PSGTVCLSILNEEEGWK 110 (163)
T ss_dssp EEEEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESSCCCSTTBC-TTSBBCCGGGCTTTTCC
T ss_pred CccEEEEEEECCC------CCCcCCC---EEEEEEECCCCCCC--CCCEEEEeCCCccCCCC-CCCcEeccccCCCCCcC
Confidence 9999999999999 9999999 99999999999999 99999999999999999 799999999975 499
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 138 PLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 138 P~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
|++||.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 111 p~~ti~~vL~~i-~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~ 152 (163)
T 3rcz_B 111 PAITIKQILLGI-QDLLDDPNIASPAQTEAYTMFKKDKVEYEK 152 (163)
T ss_dssp TTCCHHHHHHHH-HHHHTSCCTTSCSCHHHHHHHHHCHHHHHH
T ss_pred CcCcHHHHHHHH-HHHHhCCCCCCccCHHHHHHHHHCHHHHHH
Confidence 999999999999 799999999999999999999999999963
No 26
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=7.1e-35 Score=233.11 Aligned_cols=112 Identities=21% Similarity=0.364 Sum_probs=106.8
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCC-CcccCCCCCCCCeEEeccCC-C
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPP-SIYNHQSTLYSGTVCLNVIN-Q 134 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t-~IfHPnV~~~~G~vCl~~l~-e 134 (180)
..+|++.|+++|+||+ +|+|+|| +|+|.|.||++||+ +||+|+|.| +||||||+..+|.|||++|. +
T Consensus 43 ~~~nl~~w~~~I~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~ 111 (172)
T 2y9m_A 43 DETDLSKWEAIISGPS------DTPYENH---QFRILIEVPSSYPM--NPPKISFMQNNILHCNVKSATGEICLNILKPE 111 (172)
T ss_dssp STTCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEECTTSCCCTTEETTTTEECCGGGSTT
T ss_pred CCCchhEEEEEEECCC------CCcccCC---EEEEEEECCCcCCC--CCCEEEEeeCCeecCCCcCCCCEEeccccCCC
Confidence 4579999999999999 9999998 99999999999999 999999999 99999996469999999998 8
Q ss_pred CCCCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhh-CHHhHhC
Q psy7478 135 EWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLD-KPDKYKE 180 (180)
Q Consensus 135 ~WsP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~-d~~~F~k 180 (180)
.|+|+++|.+||++| ++||.+|++++|+|.+||.+|++ |++.|.+
T Consensus 112 ~W~p~~~i~~vL~si-~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~ 157 (172)
T 2y9m_A 112 EWTPVWDLLHCVHAV-WRLLREPVCDSPLDVDIGNIIRCGDMSAYQG 157 (172)
T ss_dssp TCCTTCCHHHHHHHH-HHHHHSCCTTSCSSHHHHHHHTTTCHHHHHH
T ss_pred CCCCcCcHHHHHHHH-HHHHhCCCCCCccCHHHHHHHHhCCHHHHHH
Confidence 999999999999999 69999999999999999999999 9999963
No 27
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.6e-35 Score=230.88 Aligned_cols=110 Identities=21% Similarity=0.435 Sum_probs=105.2
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|++.|+++| ||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.||+++|.+.|
T Consensus 30 ~~~~l~~w~~~i-gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~-~~G~iCl~iL~~~W 96 (160)
T 1y8x_A 30 DPDDLLNFKLVI-CPD------EGFYKSG---KFVFSFKVGQGYPH--DPPKVKCETMVYHPNID-LEGNVCLNILREDW 96 (160)
T ss_dssp STTCTTEEEEEE-CCS------SSTTTTB---CEEEEEECCTTTTT--SCCEEEECSCCCBTTBC-TTCBBCCGGGTTTC
T ss_pred cCCccceEEEEE-CCC------CCCCCCC---EEEEEEeCCCcCCC--CCCEEEEecCCccCcCC-CCCeEEcccchhhc
Confidence 467999999988 998 9999998 99999999999999 99999999999999999 59999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 97 ~p~~~i~~vL~~i-~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~ 139 (160)
T 1y8x_A 97 KPVLTINSIIYGL-QYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ 139 (160)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCCSSCSCHHHHHHHHSCHHHHHH
T ss_pred cCCCCHHHHHHHH-HHHHhCCCCCCccCHHHHHHHHHCHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 28
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4.1e-35 Score=234.57 Aligned_cols=110 Identities=21% Similarity=0.422 Sum_probs=83.4
Q ss_pred CCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCC----
Q psy7478 58 GEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVIN---- 133 (180)
Q Consensus 58 g~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~---- 133 (180)
.+|++.|+++|+||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.||+++|.
T Consensus 44 ~~nl~~W~~~I~GP~------~TpYegG---~f~~~i~fp~~YP~--~PP~v~F~T~i~HPNV~-~~G~IClsiL~~~~~ 111 (172)
T 2awf_A 44 DNDLYRWEVLIIGPP------DTLYEGG---VFKAHLTFPKDYPL--RPPKMKFITEIWHPNVD-KNGDVCISILHEPGE 111 (172)
T ss_dssp TTCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEECSCCCCTTBC-TTCBBCCGGGSCC--
T ss_pred CccccccEEEEeCCC------CCCcCCc---EEEEEEECCcccCC--CCCcccccCCCccCCCC-CCCcEehhhcCCccc
Confidence 369999999999999 9999998 99999999999999 99999999999999999 58999999996
Q ss_pred ---------CCCCCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHH-hHhC
Q psy7478 134 ---------QEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPD-KYKE 180 (180)
Q Consensus 134 ---------e~WsP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~-~F~k 180 (180)
+.|+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++ .|.+
T Consensus 112 d~~~~~~~~~~WsP~~ti~~vL~sI-~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~ 167 (172)
T 2awf_A 112 DKYGYEKPEERWLPIHTVETIMISV-ISMLADPNGDSPANVDAAKEWREDRNGEFKR 167 (172)
T ss_dssp -------CTTSCCTTCCHHHHHHHH-HHHHSCC------------------------
T ss_pred ccccccccCCCCCCcCcHHHHHHHH-HHHHHCcCCCCccCHHHHHHHHHCcHHHHHH
Confidence 6899999999999999 69999999999999999999999999 9974
No 29
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=7.3e-35 Score=229.73 Aligned_cols=109 Identities=25% Similarity=0.423 Sum_probs=104.9
Q ss_pred CCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCC--CC
Q psy7478 59 EKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQ--EW 136 (180)
Q Consensus 59 ~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e--~W 136 (180)
+|+++|+++|.||+ +|+|+|| +|+|.|.||++||+ .||+|+|.|+||||||+ .+|.||+++|.. +|
T Consensus 36 ~nl~~w~~~I~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~-~~G~iCl~iL~~~~~W 103 (157)
T 2gjd_A 36 MDLQKWEAGIPGKE------GTNWAGG---VYPITVEYPNEYPS--KPPKVKFPAGFYHPNVY-PSGTICLSILNEDQDW 103 (157)
T ss_dssp EEEEEEEEEEECCT------TSTTTTB---EEEEEEECCTTTTT--SCCEEECCTTCCCTTBC-TTSBBCCGGGCTTTTC
T ss_pred CcccEEEEEEECCC------CCCcCCe---EEEEEEEcCCCCCC--CCCeeeccCCCccCCCC-CCCcEeeecccCCCCC
Confidence 48999999999999 9999998 99999999999999 99999999999999999 699999999986 79
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 104 ~p~~~i~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~ 146 (157)
T 2gjd_A 104 RPAITLKQIVLGV-QDLLDSPNPNSPAQEPAWRSFSRNKAEYDK 146 (157)
T ss_dssp CTTCCHHHHHHHH-HHHHTSCCTTCCCCHHHHHHHHHCHHHHHH
T ss_pred CCCCcHHHHHHHH-HHHHhCCCCCCccCHHHHHHHHHCHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 30
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=9.3e-35 Score=228.40 Aligned_cols=110 Identities=18% Similarity=0.394 Sum_probs=105.6
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccC-CCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVI-NQE 135 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l-~e~ 135 (180)
.++|+++|+++|. |+ +|+|+|| +|+|.|.||++||+ .||+|+|.|+||||||+ .+|.||+++| .++
T Consensus 30 ~~~~l~~w~~~I~-P~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnV~-~~G~iCl~iL~~~~ 96 (155)
T 1wzv_A 30 DDANVLVWHALLL-PD------QPPYHLK---AFNLRISFPPEYPF--KPPMIKFTTKIYHPNVD-ENGQICLPIISSEN 96 (155)
T ss_dssp CSSCTTEEEEEEC-CC------STTGGGE---EEEEEEECCTTTTS--SCCEEEESSCCCBTTBC-TTCBCCCGGGCTTT
T ss_pred CCCchheEEEEEc-CC------CCCCCCC---EEEEEEECCCCCCC--CCCcceeeCCCccCcCC-CCCeEeecCCCccC
Confidence 5679999999999 98 9999998 99999999999999 99999999999999999 5999999999 899
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 136 WTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 136 WsP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
|+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 97 W~p~~~i~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~ 140 (155)
T 1wzv_A 97 WKPCTKTCQVLEAL-NVLVNRPNIREPLRMDLADLLTQNPELFRK 140 (155)
T ss_dssp CCTTCCHHHHHHHH-HHHHHSCCSSSCSSHHHHHHHHHCHHHHHH
T ss_pred CCCCCcHHHHHHHH-HHHHhCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 699999999999999999999999999963
No 31
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.4e-34 Score=228.93 Aligned_cols=109 Identities=22% Similarity=0.386 Sum_probs=104.9
Q ss_pred CCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCC--CC
Q psy7478 59 EKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQ--EW 136 (180)
Q Consensus 59 ~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e--~W 136 (180)
+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ .||+|+|.|+||||||+ .+|.||+++|.. .|
T Consensus 39 ~nl~~w~~~i~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~-~~G~iCl~iL~~~~~W 106 (161)
T 2grr_A 39 MNLMNWECAIPGKK------GTPWEGG---LFKLRMLFKDDYPS--SPPKCKFEPPLFHPNVY-PSGTVCLSILEEDKDW 106 (161)
T ss_dssp EEEEEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEESSCCCSTTBC-TTSBBCCGGGCTTTTC
T ss_pred CCccEEEEEEECCC------CCCccCC---EEEEEEEcCcccCC--CCCEEEEecCcccCCCC-CCCeEeehhcCCCCCc
Confidence 58999999999999 9999998 99999999999999 99999999999999999 699999999975 89
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 107 ~p~~~i~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~ 149 (161)
T 2grr_A 107 RPAITIKQILLGI-QELLNEPNIQSPAQAEAYTIYCQNRVEYEK 149 (161)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCTTSCSCHHHHHHHHHCHHHHHH
T ss_pred CCCCcHHHHHHHH-HHHHhCCCCCCccCHHHHHHHHHCHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 32
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-34 Score=233.07 Aligned_cols=110 Identities=20% Similarity=0.402 Sum_probs=105.3
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|++.|+++| ||+ +|+|+|| +|+|.|.||++||+ .||+|+|.|+||||||+ .+|.||+++|.++|
T Consensus 50 ~~~nl~~W~~~i-gP~------~tpYegg---~f~~~i~fp~~YP~--~PP~v~F~t~i~HPNV~-~~G~iCl~iL~~~W 116 (180)
T 2nvu_C 50 DPDDLLNFKLVI-CPD------EGFYKSG---KFVFSFKVGQGYPH--DPPKVKCETMVYHPNID-LEGNVALNILREDW 116 (180)
T ss_dssp STTCTTEEEEEE-CCC------SGGGTTB---CEEEEEECCTTTTT--SCCEEEECSCCCBTTBC-TTSBBCCGGGTTSC
T ss_pred ccccccceEEEE-CCC------CCCCCCC---EEEEEEeCCCcCCC--CCCcCceeccCccCCCC-CCCcEEcccccccC
Confidence 467999999988 998 9999998 99999999999999 99999999999999999 59999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 117 ~p~~~i~~vL~si-~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~ 159 (180)
T 2nvu_C 117 KPVLTINSIIYGL-QYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ 159 (180)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCTTSCSSHHHHHHHHHCHHHHHH
T ss_pred CCCCCHHHHHHHH-HHHHhCCCCCCccCHHHHHHHHHCHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 33
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2e-34 Score=243.35 Aligned_cols=111 Identities=23% Similarity=0.465 Sum_probs=107.1
Q ss_pred CCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCCC
Q psy7478 58 GEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWT 137 (180)
Q Consensus 58 g~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~Ws 137 (180)
.+|++.|+++|.||+ +|||+|| +|+|.|.||++||+ .||+|+|.|+||||||+..+|.|||++|.+.|+
T Consensus 86 ~dnl~~W~~~I~GP~------~TpYegG---~f~l~i~fp~~YP~--~PP~V~F~T~i~HPNV~~~~G~ICL~iL~~~Ws 154 (253)
T 3e46_A 86 DENFTELRGEIAGPP------DTPYEGG---RYQLEIKIPETYPF--NPPKVRFITKIWHPNISSVTGAICLDILKDQWA 154 (253)
T ss_dssp STTSSEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEESSCCCBTTBCTTTCBBCCGGGTTCCC
T ss_pred CCcccEEEEEEECCC------CCCcCCC---EEEEEEECCCCCCC--CCCeeeecCCCccCCccCCCCeeecccccCCCC
Confidence 579999999999999 9999999 99999999999999 999999999999999996699999999999999
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 138 PLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 138 P~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 155 P~~ti~~vL~sI-~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~ 196 (253)
T 3e46_A 155 AAMTLRTVLLSL-QALLAAAEPDDPQDAVVANQYKQNPEMFKQ 196 (253)
T ss_dssp TTCCHHHHHHHH-HHHHHSCCTTSCSCHHHHHHHHHCHHHHHH
T ss_pred CCCCHHHHHHHH-HHHhcCCCCCChhhHHHHHHHHHCHHHHHH
Confidence 999999999999 799999999999999999999999999963
No 34
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.9e-34 Score=232.61 Aligned_cols=110 Identities=22% Similarity=0.434 Sum_probs=103.9
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCC---
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVIN--- 133 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~--- 133 (180)
..+|++.|+++|+||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.||+++|.
T Consensus 33 ~~~nl~~W~~~I~Gp~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnV~-~~G~iClsiL~~~~ 100 (183)
T 3rz3_A 33 DEGDLYNWEVAIFGPP------NTYYEGG---YFKARLKFPIDYPY--SPPAFRFLTKMWHPNIY-ETGDVCISILHPPV 100 (183)
T ss_dssp TTCCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEESSCCCCTTBC-TTSBBCCTTC----
T ss_pred CccchhheeeeeeCCC------CCCCCCC---eEEEEEECCCCCCC--CCCeeEecCCCccCCCC-CCCcEehhhcCccc
Confidence 4579999999999999 9999998 99999999999999 99999999999999999 59999999996
Q ss_pred ----------CCCCCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhh------CHHhHh
Q psy7478 134 ----------QEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLD------KPDKYK 179 (180)
Q Consensus 134 ----------e~WsP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~------d~~~F~ 179 (180)
+.|+|++||.+||++| ++||.+|++++|+|.+||.+|++ |+++|.
T Consensus 101 ~~~~~~~~~~~~W~p~~~i~~vL~si-~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~ 161 (183)
T 3rz3_A 101 DDPQSGELPSERWNPTQNVRTILLSV-ISLLNEPNTFSPANVDASVMYRKWKESKGKDREYT 161 (183)
T ss_dssp ----------CCCCTTCCHHHHHHHH-HHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHH
T ss_pred ccccccccccCCCCCcCcHHHHHHHH-HHHHhCCCCCCcccHHHHHHHHhcccccccHHHHH
Confidence 7899999999999999 69999999999999999999998 677775
No 35
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=5.3e-35 Score=241.67 Aligned_cols=110 Identities=21% Similarity=0.526 Sum_probs=104.9
Q ss_pred CCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCCCC
Q psy7478 59 EKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWTP 138 (180)
Q Consensus 59 ~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~WsP 138 (180)
++++.|+++|.||+ +|||+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.|||++|.+.|+|
T Consensus 30 ~~l~~w~~~I~GP~------~TpYegG---~f~l~i~fP~~YP~--~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP 98 (215)
T 1tte_A 30 SDIHHLKGTFLGPP------GTPYEGG---KFVVDIEVPMEYPF--KPPKMQFDTKVYHPNISSVTGAICLDILRNAWSP 98 (215)
T ss_dssp SSCCEEEEECCEEE------EETTEEE---CCEEEEECCSCSSS--CCCEEEETTTCCCSSSCSSSSCCCSSTTTCCSCT
T ss_pred ccccccEEEEeCCC------CCCcCCC---EEEEEEeCCccCCC--CCCcccccCCCccCcCcCCCCEEECccCCCCCCC
Confidence 35679999999999 9999998 99999999999999 9999999999999999944999999999999999
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 139 LYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 139 ~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
++||.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 99 ~~ti~~VL~sI-~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~ 139 (215)
T 1tte_A 99 VITLKSALISL-QALLQSPEPNDPQDAEVAQHYLRDRESFNK 139 (215)
T ss_dssp TCCHHHHHHHH-HHHHTSCCCSSCSCHHHHHHHHHCHHHHHH
T ss_pred cCcHHHHHHHH-HHHHhCCCCCCccCHHHHHHHHHCHHHHHH
Confidence 99999999999 799999999999999999999999999963
No 36
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=3.1e-34 Score=225.21 Aligned_cols=109 Identities=20% Similarity=0.400 Sum_probs=104.2
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCC-CC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVIN-QE 135 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~-e~ 135 (180)
..+|++.|+++|. |. +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.||+++|. ++
T Consensus 28 ~~~~l~~w~~~i~-P~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~-~~G~iCl~iL~~~~ 94 (154)
T 1c4z_D 28 DEANLLTWQGLIV-PD------NPPYDKG---AFRIEINFPAEYPF--KPPKITFKTKIYHPNID-EKGQVCLPVISAEN 94 (154)
T ss_dssp SCSSSSEEEEEEC-CC------SSSCCSC---CEEEEEECCTTTTT--SCCEEEESSCCCCTTBC-TTCBBCCTTTSSSS
T ss_pred CCCchheEEEEEe-CC------CCCccCC---eEEEEEEeCCCCCC--CCCEEEEeCCCccccCC-CCCEEECCCCCCCC
Confidence 4579999999998 88 9999998 99999999999999 99999999999999999 69999999996 89
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHh
Q psy7478 136 WTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYK 179 (180)
Q Consensus 136 WsP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~ 179 (180)
|+|++||.+||++| ++||.+|++++|+|.+||.+|++|++.|.
T Consensus 95 W~p~~~i~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~~~~~f~ 137 (154)
T 1c4z_D 95 WKPATKTDQVIQSL-IALVNDPQPEHPLRADLAEEYSKDRKKFC 137 (154)
T ss_dssp CCTTCCHHHHHHHH-HHHHHSCCCSSCSCHHHHHHHHTCSSTTH
T ss_pred CCCCCcHHHHHHHH-HHHHcCCCCCchhhHHHHHHHHHhHHHHH
Confidence 99999999999999 69999999999999999999999999986
No 37
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.2e-35 Score=234.61 Aligned_cols=110 Identities=45% Similarity=0.771 Sum_probs=105.4
Q ss_pred CCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCCCC
Q psy7478 59 EKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWTP 138 (180)
Q Consensus 59 ~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~WsP 138 (180)
+|++.|+++|+||+ +|||+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.||+++|.+.|+|
T Consensus 48 ddl~~W~~~I~GP~------~tpYegG---~f~l~i~fp~~YP~--~PP~V~F~t~i~HPNV~~~~G~ICL~iL~~~WsP 116 (179)
T 2z5d_A 48 GGLNEFVVKFYGPQ------GTPYEGG---VWKVRVDLPDKYPF--KSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTA 116 (179)
T ss_dssp EETTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESSCCCBTTBCTTTCBBCHHHHHHHCCT
T ss_pred CCCceeEEEEECCC------CCCccCC---EEEEEeeCCCCCCC--CCceEEEecCCccCcCCCCCCeEeccccccCCCC
Confidence 57899999999999 9999998 99999999999999 9999999999999999944999999999999999
Q ss_pred CCChHHHHHH-HHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 139 LYDLSNIFET-FLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 139 ~~tl~~iL~~-Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+++|.+||++ | ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 117 ~~ti~~iL~s~I-~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~ 158 (179)
T 2z5d_A 117 LYDLTNIFESFL-PQLLAYPNPIDPLNGDAAAMYLHRPEEYKQ 158 (179)
T ss_dssp TCCTTHHHHTHH-HHHHHSCCCSSCSCHHHHHHHHHCHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHhCCCCCCccCHHHHHHHHHCHHHHHH
Confidence 9999999999 6 799999999999999999999999999963
No 38
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=6.6e-34 Score=225.99 Aligned_cols=110 Identities=21% Similarity=0.343 Sum_probs=103.8
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCC--
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQ-- 134 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e-- 134 (180)
+.+|++.|+++| ||+ +|||+|| +|+|.|.||++||+ .||+|+|.|+||||||+ .+|.||+++|..
T Consensus 40 ~~~~l~~w~~~i-gp~------~tpyegg---~f~~~i~fp~~YP~--~pP~v~f~t~i~HPnv~-~~G~iCl~iL~~~~ 106 (167)
T 3fn1_B 40 DPNKLHCFQLTV-TPD------EGYYQGG---KFQFETEVPDAYNM--VPPKVKCLTKIWHPNIT-ETGEICLSLLREHS 106 (167)
T ss_dssp SSSCTTEEEEEE-CCS------SSTTTTC---CEEEEEECCTTBTT--BCCEEEECSCCCCSSBC-TTCCBCCGGGSBCS
T ss_pred CCCcceeEEEEE-CCC------CCccCCC---EEEEEEECCCCCCC--CCCeeEecCCcccCCCC-CCCEEechhhccCC
Confidence 457899999998 888 9999998 99999999999999 99999999999999999 699999999975
Q ss_pred ----CCCCCCChHHHHHHHHHHHhcC-CCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 135 ----EWTPLYDLSNIFETFLPQLLTY-PNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 135 ----~WsP~~tl~~iL~~Ii~~ll~~-P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+|+++|.+||++| ++||.+ |++++|+|.+||.+|++|++.|.+
T Consensus 107 ~~~~~W~p~~~i~~vl~~i-~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~ 156 (167)
T 3fn1_B 107 IDGTGWAPTRTLKDVVWGL-NSLFTDLLNFDDPLNIEAAEHHLRDKEDFRN 156 (167)
T ss_dssp SSTTSBCTTCCHHHHHHHH-HHTTTTTCCSSSCSCHHHHHHHHHCHHHHHH
T ss_pred CCCCCCCCcCcHHHHHHHH-HHHHcCCCCCCcchhHHHHHHHHHCHHHHHH
Confidence 799999999999999 699999 699999999999999999999963
No 39
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.1e-33 Score=229.79 Aligned_cols=111 Identities=26% Similarity=0.449 Sum_probs=105.4
Q ss_pred hcCCCcc---ceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccC
Q psy7478 56 KEGEKRR---TLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVI 132 (180)
Q Consensus 56 keg~nl~---~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l 132 (180)
-.++|++ .|+++|. |+ +|+|+|| +|+|.|.||++||+ .||+|+|.|+||||||+ .+|.||+++|
T Consensus 55 p~~~nl~~~~~w~~~I~-p~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnV~-~~G~iCl~iL 121 (190)
T 3o2u_A 55 PDSADRSQSPKLEVIVR-PD------EGYYNYG---SINFNLDFNEVYPI--EPPKVVCLKKIFHPNID-LKGNVCLNIL 121 (190)
T ss_dssp TTCCCTTSCCEEEEEEC-CS------SSTTTTC---CEEEEEECCTTTTT--SCCEEEECSCCCCTTBC-TTSBBCCGGG
T ss_pred CCCccCCcCCeEEEEEc-CC------CCCCCCC---EEEEEEECCCCCCC--CCceeEEecCcccCCCC-CCCeEechhc
Confidence 3467999 9999997 66 8999998 99999999999999 99999999999999999 6999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 133 NQEWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 133 ~e~WsP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
.++|+|+++|.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 122 ~~~W~p~~~i~~vL~~i-~~ll~~pn~~~pln~~aa~~~~~d~~~f~~ 168 (190)
T 3o2u_A 122 REDWSPALDLQSIITGL-LFLFLEPNPNDPLNKDAAKLLCEGEKEFAE 168 (190)
T ss_dssp TTTCCTTCCHHHHHHHH-HHHHHSCCTTSCSSHHHHHHHHTCHHHHHH
T ss_pred cCCCCCCCCHHHHHHHH-HHHHhCCCCCcchhHHHHHHHHHCHHHHHH
Confidence 99999999999999999 699999999999999999999999999963
No 40
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=8.1e-34 Score=225.77 Aligned_cols=112 Identities=20% Similarity=0.307 Sum_probs=105.2
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCC--CCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVE--GEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQ 134 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~--ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e 134 (180)
..+|++.|+++|+||+ +|+|+ || +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.||+++|.+
T Consensus 45 ~~~nl~~w~~~i~Gp~------~tpye~~gg---~f~~~i~fp~~YP~--~pP~v~f~t~i~HPnv~-~~G~iCl~il~~ 112 (167)
T 4ds2_A 45 DTDTIYNWILKVKAPA------DSVYGGAGN---TYQLSVLFSDDYPH--EPPTVRFVTPVYSPLVT-GEGGICDRMVND 112 (167)
T ss_dssp EESSTTEEEEEEECCT------TSGGGTTCC---EEEEEEECCTTTTT--SCCEEEESSCCCCSSCC-TTSCCCTHHHHT
T ss_pred CCCcccEEEEEEECCC------CCCccCCCC---EEEEEEECCCCCCC--CCCEEEEeCCcccccCC-CCCEEEcccCcC
Confidence 4579999999999999 99999 76 99999999999999 99999999999999999 799999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhcC--CCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 135 EWTPLYDLSNIFETFLPQLLTY--PNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 135 ~WsP~~tl~~iL~~Ii~~ll~~--P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|+|+++|.++|++++++|+.+ |++++|+|.+||.+|++|++.|.+
T Consensus 113 ~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~ 160 (167)
T 4ds2_A 113 FWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAA 160 (167)
T ss_dssp TCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHH
Confidence 9999999999887776888875 899999999999999999999963
No 41
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.97 E-value=2.5e-32 Score=242.95 Aligned_cols=111 Identities=23% Similarity=0.472 Sum_probs=106.9
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEW 136 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~W 136 (180)
..+|++.|+++|+||+ +|||+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.||+++|.+.|
T Consensus 28 ~~~nl~~w~~~i~Gp~------~tpyegg---~f~~~i~fp~~YP~--~pP~v~f~t~i~HPnv~-~~G~iCl~il~~~W 95 (399)
T 4ddg_A 28 VGDDMFHWQATIMGPN------DSPYQGG---VFFLTIHFPTDYPF--KPPKVAFTTRIYHPNIN-SNGSISLDILRSQW 95 (399)
T ss_dssp ETTEEEEEEEEEECCT------TSSSTTC---EEEEEEECCSSTTT--SCCEEEESSCCCCTTBC-TTCBBCCGGGTTSC
T ss_pred cCCcceEEEEEEECCC------CCCCCCC---EEEEEEECCcccCC--CCcEEEeeccccccccC-CCCeEeCcccccCC
Confidence 3579999999999999 9999998 99999999999999 99999999999999999 69999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhCHHhHhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDKPDKYKE 180 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d~~~F~k 180 (180)
+|++||.+||++| ++||.+|++++|+|.+||.+|++|++.|.+
T Consensus 96 ~p~~~i~~vL~~i-~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~ 138 (399)
T 4ddg_A 96 SPALTISKVLLSI-CSLLCDPNPDDPLVPEIARIYKTDREKYNR 138 (399)
T ss_dssp CTTCCHHHHHHHH-HHHHHSCCTTSCSSHHHHHHHHHCHHHHHH
T ss_pred CccccHHHHHHHH-HHHHcCCCCCchhhHHHHHHHHHCHHHHHH
Confidence 9999999999999 699999999999999999999999999963
No 42
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.97 E-value=2.4e-32 Score=215.76 Aligned_cols=101 Identities=15% Similarity=0.246 Sum_probs=94.5
Q ss_pred CccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeE---EeccCCCCC
Q psy7478 60 KRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTV---CLNVINQEW 136 (180)
Q Consensus 60 nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~v---Cl~~l~e~W 136 (180)
|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+ .+|.| ||++|. +|
T Consensus 53 nl~~W~~~I~GP~------~TpYegG---~f~l~i~fp~~YP~--~PP~v~F~t~i~HPNV~-~~G~icisCL~iL~-~W 119 (156)
T 2q0v_A 53 TLSNWSCTIFGQP------GTVFENR---IYSLTIFCDDNYPD--SPPTVKFDTKIEMSCVD-NCGRVIKNNLHILK-NW 119 (156)
T ss_dssp TCCEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESBCCCCTTBC-TTSBBCGGGSHHHH-TC
T ss_pred cceeeEEEEECCC------CCCcCCc---EEEEEEECCCcCCC--CCCeEEEEcccccCCCc-cCCeEehhhccccc-CC
Confidence 6999999999999 9999998 99999999999999 99999999999999999 58999 888886 59
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhhC
Q psy7478 137 TPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLDK 174 (180)
Q Consensus 137 sP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~d 174 (180)
+|+++|.+||++| ++||.+|++++|+|++||.+|.+|
T Consensus 120 sP~~ti~~vL~sI-~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 120 NRNYTIETILISL-RQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp CTTCCHHHHHHHH-HHHTTSTTTTTCCCCCTTCBC---
T ss_pred CCcCcHHHHHHHH-HHHHhCCCCCCcCChHHHHHhhhC
Confidence 9999999999999 799999999999999999999876
No 43
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.97 E-value=5.8e-32 Score=209.05 Aligned_cols=99 Identities=13% Similarity=0.215 Sum_probs=93.8
Q ss_pred CccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeE--EeccCCCCCC
Q psy7478 60 KRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTV--CLNVINQEWT 137 (180)
Q Consensus 60 nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~v--Cl~~l~e~Ws 137 (180)
|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.| ||+++. +|+
T Consensus 38 nl~~w~~~i~GP~------~tpyegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~HPnv~~~~G~i~~cL~~l~-~W~ 105 (138)
T 1jat_B 38 TMTKWNGTILGPP------HSNHENR---IYSLSIDCGPNYPD--SPPKVTFISKINLPCVNPTTGEVQTDFHTLR-DWK 105 (138)
T ss_dssp TCCEEEEEEECCS------SSTTTTC---EEEEEEECCTTTTT--SCCEEEESBCCCCTTBCTTTCBBCTTSHHHH-TCC
T ss_pred cceEEEEEEECCC------CCCccce---EEEEEEECCCCCCC--CCCceEEEcccccCCEeCCCCEEeeecccCC-CCC
Confidence 6999999999999 9999998 99999999999999 99999999999999999645999 999886 899
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHH
Q psy7478 138 PLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMY 171 (180)
Q Consensus 138 P~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly 171 (180)
|+++|.+||++| ++||.+|++++|+|++||.+|
T Consensus 106 p~~~i~~vl~~i-~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 106 RAYTMETLLLDL-RKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp TTCCHHHHHHHH-HHHHTSHHHHTSCCCCTTCBC
T ss_pred CcCcHHHHHHHH-HHHHcCCCCCCCCCcchhhcC
Confidence 999999999999 799999999999999998765
No 44
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.97 E-value=9.9e-31 Score=207.39 Aligned_cols=97 Identities=18% Similarity=0.237 Sum_probs=92.1
Q ss_pred CccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCC--CCCC
Q psy7478 60 KRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVIN--QEWT 137 (180)
Q Consensus 60 nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~--e~Ws 137 (180)
|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.||+++|. +.|+
T Consensus 57 ~l~~W~~~I~GP~------~TpYegG---~f~l~i~fp~~YP~--~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~Ws 125 (160)
T 2a4d_A 57 TLTRWTGMIIGPP------RTIYENR---IYSLKIECGPKYPE--APPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQ 125 (160)
T ss_dssp TCCEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEESBCCCCTTBCTTTCBBCGGGSHHHHTCC
T ss_pred cceeeEEEEECCC------CCCccCe---EEEEEEECCCcCCC--CCcEEEEecCceeCCEECCCCEEehhhcCCccCCC
Confidence 3999999999999 9999998 99999999999999 99999999999999999669999999997 8999
Q ss_pred CCCChHHHHHHHHHHHh-cCCCCCCCccHHHH
Q psy7478 138 PLYDLSNIFETFLPQLL-TYPNPTDPLNGDAA 168 (180)
Q Consensus 138 P~~tl~~iL~~Ii~~ll-~~P~~~~p~N~eaA 168 (180)
|+++|.+||++| ++|| .+||+++|+|.+||
T Consensus 126 P~~ti~~vL~sI-~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 126 NSYSIKVVLQEL-RRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp TTCCHHHHHHHH-HHHHTSTTTTTCCCCCTTC
T ss_pred ccCcHHHHHHHH-HHHHccCCCCCCCCChhhc
Confidence 999999999999 6888 57999999999998
No 45
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.96 E-value=1.4e-30 Score=208.25 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=92.0
Q ss_pred CccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCC--CCCC
Q psy7478 60 KRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVIN--QEWT 137 (180)
Q Consensus 60 nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~--e~Ws 137 (180)
|++.|+++|+||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+||||||+..+|.||+++|. +.|+
T Consensus 67 nl~~W~~~I~GP~------~TpYegG---~f~l~i~fp~~YP~--~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~Ws 135 (170)
T 2hlw_A 67 TLTRWTGMIIGPP------RTIYENR---IYSLKIECGPKYPE--APPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQ 135 (170)
T ss_dssp SCCBEEEEECCCS------SSTTSSC---CBCEEEECCSSCTT--SCCEEEECBCCCCSSBCSSSCBBCTTTCHHHHTCC
T ss_pred cceeeEEEEeCCC------CCCcCCc---EEEEEEECCCCCCC--CCCeeEEecccccCCEeCCCCEEEhhhcCCCCCCC
Confidence 4999999999999 9999998 99999999999999 99999999999999999669999999997 8999
Q ss_pred CCCChHHHHHHHHHHHhc-CCCCCCCccHHHH
Q psy7478 138 PLYDLSNIFETFLPQLLT-YPNPTDPLNGDAA 168 (180)
Q Consensus 138 P~~tl~~iL~~Ii~~ll~-~P~~~~p~N~eaA 168 (180)
|++||.+||++| ++||. .||+++|+|.+||
T Consensus 136 P~~ti~~vL~sI-~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 136 NSYSIKVVLQEL-RRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp SSCCHHHHHHHH-HHHHHSTTTSSSCCCSSCC
T ss_pred ccCcHHHHHHHH-HHHHccCCCCCCCCCcccc
Confidence 999999999999 68886 6999999999998
No 46
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.96 E-value=1.8e-29 Score=192.15 Aligned_cols=92 Identities=14% Similarity=0.250 Sum_probs=82.8
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCc-ccCCCCCCCCeEEeccCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSI-YNHQSTLYSGTVCLNVINQE 135 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~I-fHPnV~~~~G~vCl~~l~e~ 135 (180)
..+|+++|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|++ |||||+ .+|.||+++|.++
T Consensus 31 ~~~~l~~w~~~i~GP~------~tpYegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~~HPnv~-~~G~iCl~iL~~~ 98 (125)
T 2fo3_A 31 HPNNIRIWIVKYVGLE------NTIYANE---VYKLKIIFPDDYPL--KPPIVYFLQKPPKHTHVY-SNGDICLSLLGDD 98 (125)
T ss_dssp CTTCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEECSSCCCBTTBC-TTSBBCCGGGTTT
T ss_pred CcchhhhhheEEeCCC------CCCcCCC---EEEEEEEcCCCCCC--CCCEEEEeCCCCCCCcCC-CCCEEEchhcCCC
Confidence 4579999999999999 9999998 99999999999999 99999999997 999999 6999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCCC
Q psy7478 136 WTPLYDLSNIFETFLPQLLTYPNPTD 161 (180)
Q Consensus 136 WsP~~tl~~iL~~Ii~~ll~~P~~~~ 161 (180)
|+|++||.+||++| ++||.+|+...
T Consensus 99 W~P~~~i~~vl~si-~~ll~~p~~~~ 123 (125)
T 2fo3_A 99 YNPSLSISGLVLSI-ISMLSSAKEKK 123 (125)
T ss_dssp CCTTCCHHHHHHHH-HHHHC------
T ss_pred CCCCCcHHHHHHHH-HHHHhCccccc
Confidence 99999999999999 79999998753
No 47
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.96 E-value=5.6e-29 Score=192.07 Aligned_cols=90 Identities=14% Similarity=0.259 Sum_probs=85.7
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCc-ccCCCCCCCCeEEeccCCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSI-YNHQSTLYSGTVCLNVINQE 135 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~I-fHPnV~~~~G~vCl~~l~e~ 135 (180)
..+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|++ |||||+ .+|.||+++|.++
T Consensus 45 ~~~nl~~W~~~I~GP~------~tpYegg---~f~~~i~fp~~YP~--~PP~v~f~t~i~~HPnv~-~~G~ICl~iL~~~ 112 (136)
T 2h2y_A 45 HPSNIRIWIVQYVGLE------NTIYANE---VYKIKIIFPDNYPL--KPPIVYFLQKPPKHTHVY-SNGDICLSVLGDD 112 (136)
T ss_dssp CTTCTTEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTT--SCCEEEECSSCCCCTTBC-TTCCBCCGGGTTT
T ss_pred ccccccccEEEEECCC------CCceeCC---EEEEEEEeCCCCCC--CCCEEEEeCCCCCCCcCC-CCCEEECccccCC
Confidence 3579999999999999 9999998 99999999999999 99999999996 999999 6999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCC
Q psy7478 136 WTPLYDLSNIFETFLPQLLTYPNP 159 (180)
Q Consensus 136 WsP~~tl~~iL~~Ii~~ll~~P~~ 159 (180)
|+|+++|.+||++| ++||.+|+.
T Consensus 113 WsP~~ti~~vL~si-~sll~~p~~ 135 (136)
T 2h2y_A 113 YNPSLSISGLILSI-ISMLSSAKE 135 (136)
T ss_dssp CCTTCCHHHHHHHH-HHHHSSSCC
T ss_pred CCCCCcHHHHHHHH-HHHHhCcCc
Confidence 99999999999999 699999874
No 48
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.96 E-value=3.4e-29 Score=217.66 Aligned_cols=110 Identities=16% Similarity=0.303 Sum_probs=102.3
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCC-----cccCCCCCCCCeEEecc
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPS-----IYNHQSTLYSGTVCLNV 131 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~-----IfHPnV~~~~G~vCl~~ 131 (180)
..+|++.|+++|+||+ +|||+|| +|.|.|.||++||+ .||+|+|.|+ ||||||+ .+|.|||++
T Consensus 105 ~ednl~~w~~~I~GP~------~TpYegG---~F~l~I~fP~dYP~--~PP~V~F~T~~g~~~ifHPNV~-~~G~ICLsi 172 (323)
T 3ceg_A 105 DEERLDIMKVLITGPA------DTPYANG---CFEFDVYFPQDYPS--SPPLVNLETTGGHSVRFNPNLY-NDGKVCLSI 172 (323)
T ss_dssp ESSCTTEEEEEEEBCT------TSTTBTC---EEEEEEECCTTTTT--SCCEEEECCSTTTTCCCBTTBC-TTCBBCCGG
T ss_pred cCCCccccEEEEeCCC------CCCcCCC---EEEEEEeCCCCCCC--CCCeEEEeccCCCcccccCCCC-cCCeEechh
Confidence 4579999999999999 9999998 99999999999999 9999999998 9999999 699999999
Q ss_pred CC-------CCCCCCC-ChHHHHHHHHHHHhc--CCCCCCCccHHH--HHHHhhCHHhHh
Q psy7478 132 IN-------QEWTPLY-DLSNIFETFLPQLLT--YPNPTDPLNGDA--AAMYLDKPDKYK 179 (180)
Q Consensus 132 l~-------e~WsP~~-tl~~iL~~Ii~~ll~--~P~~~~p~N~ea--A~ly~~d~~~F~ 179 (180)
|. +.|+|++ ||.+||++| ++||. +|++++|+|.+| +.+|.+|+..|.
T Consensus 173 L~~~~g~~~e~WsPa~stI~~VLlsI-qsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~ 231 (323)
T 3ceg_A 173 LNTWHGRPEEKWNPQTSSFLQVLVSV-QSLILVAEPYFNEPGYERSRGTPSGTQSSREYD 231 (323)
T ss_dssp GTSSCCCGGGSCCTTTCCHHHHHHHH-HHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHH
T ss_pred hccccCCCcCCCCcCcCCHHHHHHHH-HHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHH
Confidence 97 6899999 899999999 68885 788899999987 688999999885
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.95 E-value=7.9e-28 Score=185.97 Aligned_cols=86 Identities=16% Similarity=0.333 Sum_probs=82.0
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcc--cCCCCCCCCeEEeccCCC
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIY--NHQSTLYSGTVCLNVINQ 134 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~If--HPnV~~~~G~vCl~~l~e 134 (180)
..+|++.|+++|.||+ +|+|+|| +|+|.|.||++||+ +||+|+|.|+|| ||||+ .+|.||+++|.+
T Consensus 49 ~~~nl~~W~~~I~GP~------~TpYegG---~f~l~i~fp~~YP~--~PP~v~F~T~i~~~HPNV~-~~G~ICL~iL~~ 116 (136)
T 2a7l_A 49 VQNSITQWIVDMEGAP------GTLYEGE---KFQLLFKFSSRYPF--DSPQVMFTGENIPVHPHVY-SNGHICLSILTE 116 (136)
T ss_dssp CCCSCEEEEEEEECCT------TSTTTTC---EEEEEEEECTTTTT--SCCEEEEESSCCCCBTTBC-TTCBBCCGGGTT
T ss_pred CccccceeEEEEECCC------CCccccE---EEEEEEECCCCCCC--CCCEEEEeCCCcCCCccCC-CCCeEEchhcCC
Confidence 4679999999999999 9999998 99999999999999 999999999999 99999 699999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhc
Q psy7478 135 EWTPLYDLSNIFETFLPQLLT 155 (180)
Q Consensus 135 ~WsP~~tl~~iL~~Ii~~ll~ 155 (180)
+|+|+++|.+||++| ++||.
T Consensus 117 ~WsP~~ti~~vL~sI-~slL~ 136 (136)
T 2a7l_A 117 DWSPALSVQSVCLSI-ISMLS 136 (136)
T ss_dssp TCCTTSCHHHHHHHH-HHHTC
T ss_pred CCCCCCcHHHHHHHH-HHHhC
Confidence 999999999999999 68874
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.92 E-value=2.5e-26 Score=185.86 Aligned_cols=94 Identities=12% Similarity=0.170 Sum_probs=84.7
Q ss_pred cCCCccceEEEEecC-CCCCCCCCCCCCCC--------CCCeeEEEEEecCCCCCCCCCCcEeeCCCcccC-CCCCCCCe
Q psy7478 57 EGEKRRTLTFIRIGK-PALKPRPTRCVEGE--------GAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNH-QSTLYSGT 126 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp-~~~~~~p~tpy~gg--------g~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHP-nV~~~~G~ 126 (180)
..+|++.|+++|.|| + +|||++| |.|+|.|.|.||++||+ .||+|+|.|++||| ||+ .+|.
T Consensus 55 ~~dnl~~W~~~I~Gp~~------~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~--~PP~V~f~tpi~hPnnV~-~~G~ 125 (186)
T 1zuo_A 55 INDSLYDWHVKLQKVDP------DSPLHSDLQILKEKEGIEYILLNFSFKDNFPF--DPPFVRVVLPVLSGGYVL-GGGA 125 (186)
T ss_dssp ETTEEEEEEEEECCCCT------TSHHHHHHHHHHHHHSCCSEEEEEECCTTTTS--SCCEEEEEESCEESTTBC-GGGB
T ss_pred cCCccceeEEEEECCCC------CCCccccchhhccccCceEEEEEEECCCCCCC--CCCeEEEeCCccCCCccC-CCCc
Confidence 457999999999997 7 9999982 01299999999999999 99999999999999 699 6999
Q ss_pred EEeccCC-CCCCCCCChHHHHHHHHHHHhcCCCCC
Q psy7478 127 VCLNVIN-QEWTPLYDLSNIFETFLPQLLTYPNPT 160 (180)
Q Consensus 127 vCl~~l~-e~WsP~~tl~~iL~~Ii~~ll~~P~~~ 160 (180)
|||++|. ++|+|+++|.+||++| ++||.+|++.
T Consensus 126 ICL~iL~~~~WsP~~ti~~VL~sI-~slL~~p~a~ 159 (186)
T 1zuo_A 126 LCMELLTKQGWSSAYSIESVIMQI-NATLVKGKAR 159 (186)
T ss_dssp BCCGGGSTTTCCTTSCHHHHHHHH-HHHHHHTTCE
T ss_pred EEeccCCCCCCCCcCcHHHHHHHH-HHHHcCCChh
Confidence 9999997 7999999999999999 6999988654
No 51
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.92 E-value=3.2e-25 Score=179.42 Aligned_cols=91 Identities=15% Similarity=0.239 Sum_probs=78.8
Q ss_pred cCCCccceEEEEecCCCCCCCCCCCCCCCCCCeeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccC---C
Q psy7478 57 EGEKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVI---N 133 (180)
Q Consensus 57 eg~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l---~ 133 (180)
..+|+++|+++|.||+ +|+|+|| +|+|.|.||++||+ .||+|+|.|+ ||||+ .+|.|||++| .
T Consensus 39 ~~~nl~~W~~~I~GP~------~TpYegG---~f~l~i~fP~~YP~--~PP~v~f~T~--~~~~~-~~G~ICL~iL~~~~ 104 (187)
T 2f4w_A 39 LPSNILEWHYVVRGPE------MTPYEGG---YYHGKLIFPREFPF--KPPSIYMITP--NGRFK-CNTRLCLSITDFHP 104 (187)
T ss_dssp ETTEEEEEEEEEECCT------TSTTTTC---EEEEEEECCTTTTS--SCCEEEECSC--CSSBC-TTSCBC--------
T ss_pred cCCccceeEEEEeCCC------CCCCCCC---EEEEEEEcCCCCCC--CCCcccccCC--Cceec-cCCeEeeeccccCc
Confidence 3579999999999999 9999998 99999999999999 9999999999 99999 6999999999 5
Q ss_pred CCCCCCCChHHHHHHHHHHHhcCCCCCCC
Q psy7478 134 QEWTPLYDLSNIFETFLPQLLTYPNPTDP 162 (180)
Q Consensus 134 e~WsP~~tl~~iL~~Ii~~ll~~P~~~~p 162 (180)
+.|+|+++|.+||++| ++||.+|+++..
T Consensus 105 ~~W~P~~ti~~vL~si-~sll~~p~p~~g 132 (187)
T 2f4w_A 105 DTWNPAWSVSTILTGL-LSFMVEKGPTLG 132 (187)
T ss_dssp --CCTTCCHHHHHHHH-HHHHHSCCCCTT
T ss_pred cCCCCcCcHHHHHHHH-HHHhcCCCCCCc
Confidence 8999999999999999 699999988643
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.72 E-value=2e-18 Score=137.25 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=80.0
Q ss_pred CCCccceEEEEecCCCCCCCCCCCCCCC-------CCCeeEEEEEecCCCCCCCCCCcEeeCCC-cccCCCCCCCCeEEe
Q psy7478 58 GEKRRTLTFIRIGKPALKPRPTRCVEGE-------GAPTRTLSVQIPLHRVHEQGVPPVVYPPS-IYNHQSTLYSGTVCL 129 (180)
Q Consensus 58 g~nl~~W~~~I~Gp~~~~~~p~tpy~gg-------g~~~f~~~I~fp~~YP~~~~pP~V~F~t~-IfHPnV~~~~G~vCl 129 (180)
.+|+..|..++.|+. +|+|+|| ..+.|.|+|.||.+||+ +||.|+|.+. +|||||+ .+|+|||
T Consensus 52 k~n~~~W~~ii~Gp~------gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~--~PPeV~F~~~~~~hpnmY-~~G~ICL 122 (172)
T 2z6o_A 52 KNADNDWFRLESNKE------GTRWFGKCWYIHDLLKYEFDIEFDIPITYPT--TAPEIAVPELDGKTAKMY-RGGKICL 122 (172)
T ss_dssp HHTTCCCEEEEECTT------SCEEEEEEEEEETTEEEEEEEEEECCTTTTT--SCCCCBCGGGTTTCSSBC-TTSBBCC
T ss_pred ccccceeEEeecCCC------CCcccCcccccccccceEEEEEEECCCCCCC--CCCeeeeCCCCCCCCCCC-CCCcEec
Confidence 359999999999999 9999985 11289999999999999 9999999998 9999999 5999999
Q ss_pred ccCC-C---CCCCCCChHHHHHHHHHHHhcCCCCCCCccHHHHHHHhh
Q psy7478 130 NVIN-Q---EWTPLYDLSNIFETFLPQLLTYPNPTDPLNGDAAAMYLD 173 (180)
Q Consensus 130 ~~l~-e---~WsP~~tl~~iL~~Ii~~ll~~P~~~~p~N~eaA~ly~~ 173 (180)
++++ + .|+|+++|..||.- .+..++..|++.+...
T Consensus 123 dIL~kp~Ws~~~P~~~IahiL~l---------gl~pwla~eip~lv~~ 161 (172)
T 2z6o_A 123 TDHFKPLWARNVPKFGLAHLMAL---------GLGPWLAVEIPDLIQK 161 (172)
T ss_dssp CTTHHHHHHHHTTSCCHHHHHHH---------THHHHHHHHHHHHHHH
T ss_pred hhhccccccccCCccCHHHHHhh---------ccCchhhhhhHHHHHc
Confidence 9994 4 45599999999842 1233466666666543
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.62 E-value=5.7e-16 Score=122.83 Aligned_cols=85 Identities=15% Similarity=0.240 Sum_probs=71.0
Q ss_pred ceEEEEecCCCCCCCCCCCCCCCCCCe---eEEEEEecCCCCCCCCCCcEeeCC-------C---cc-cCCCCCCCCeEE
Q psy7478 63 TLTFIRIGKPALKPRPTRCVEGEGAPT---RTLSVQIPLHRVHEQGVPPVVYPP-------S---IY-NHQSTLYSGTVC 128 (180)
Q Consensus 63 ~W~~~I~Gp~~~~~~p~tpy~ggg~~~---f~~~I~fp~~YP~~~~pP~V~F~t-------~---If-HPnV~~~~G~vC 128 (180)
.+-..+.|.- .++|.|+ + |.+.|.||.+||+ .||.|.|.+ + |+ ||||| .+|.||
T Consensus 62 ~~Ll~l~Gti------pv~y~g~---~~Yn~pi~IwlP~~YP~--~PP~v~v~p~t~~m~~~~~~I~~hpnVD-~~G~I~ 129 (162)
T 3r3q_A 62 QLLLSIYGTI------STGEDGS---SPHSIPVIMWVPSMYPV--KPPFISINLENFDMNTISSSLPIQEYID-SNGWIA 129 (162)
T ss_dssp EEEEEEEEEE------ECSCCTT---SCCEEEEEEECCTTTTT--SCCEEEECGGGCCTTTSCTTSTHHHHBC-TTSBBC
T ss_pred heEEEEECcc------CccccCc---ccccccEEEEeCcccCC--CCCEEEEECCCccccccccccCCCCCCC-CCCcEe
Confidence 3444444444 4678887 7 8899999999999 999998865 1 77 99999 699999
Q ss_pred eccCCCCCCC-CCChHHHHHHHHHHHhcCCCCCC
Q psy7478 129 LNVINQEWTP-LYDLSNIFETFLPQLLTYPNPTD 161 (180)
Q Consensus 129 l~~l~e~WsP-~~tl~~iL~~Ii~~ll~~P~~~~ 161 (180)
+++|. +|+| +++|.++|.+| +++|.+|+++.
T Consensus 130 lpyL~-~W~p~~s~L~~ll~~l-~~lf~ep~~d~ 161 (162)
T 3r3q_A 130 LPILH-AWDPAAMNLIMVVQEL-MSLLHEPPQDQ 161 (162)
T ss_dssp CGGGG-SCCGGGCCHHHHHHHH-HHTTSCCCCCC
T ss_pred Ccccc-cCCCCcCcHHHHHHHH-HHHhcCCCCCC
Confidence 99994 7999 68999999999 69999999975
No 54
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.24 E-value=1.3e-11 Score=96.31 Aligned_cols=80 Identities=14% Similarity=0.180 Sum_probs=66.3
Q ss_pred CCccceEEEEecCCCCCCCCCCCCCCCCCCeeE--EEEEecCCCCCCCCCCcEeeCCC------cccCCCCCCCCeEEec
Q psy7478 59 EKRRTLTFIRIGKPALKPRPTRCVEGEGAPTRT--LSVQIPLHRVHEQGVPPVVYPPS------IYNHQSTLYSGTVCLN 130 (180)
Q Consensus 59 ~nl~~W~~~I~Gp~~~~~~p~tpy~ggg~~~f~--~~I~fp~~YP~~~~pP~V~F~t~------IfHPnV~~~~G~vCl~ 130 (180)
.+|+.|.++|..+ |.|+ +|. +.|.||.+||+ .||.| |+++ .+||||| .+|.||++
T Consensus 51 ~~LL~l~GtIpv~----------y~g~---~y~iPi~Iwlp~~YP~--~pP~v-fv~pt~~m~I~~~~~Vd-~~G~i~lp 113 (146)
T 3obq_A 51 RELMNLTGTIPVP----------YRGN---TYNIPICLWLLDTYPY--NPPIC-FVKPTSSMTIKTGKHVD-ANGKIYLP 113 (146)
T ss_dssp CEEEEEEEEEEEE----------CSSC---EEEEEEEEECCTTTTT--SCCEE-EECCCTTEEECCBTTBC-TTCBBCCH
T ss_pred heEEEEEEEeeee----------ecCc---cccceEEEEeCccCCC--CCCEE-EEeCCCCCEECCCCCCC-CCCCEecc
Confidence 4788999999844 5676 888 48899999999 99999 6655 4899999 69999999
Q ss_pred cCCCCCCC-CCChHHHHHHHHHHHhc-CC
Q psy7478 131 VINQEWTP-LYDLSNIFETFLPQLLT-YP 157 (180)
Q Consensus 131 ~l~e~WsP-~~tl~~iL~~Ii~~ll~-~P 157 (180)
.|.+ |++ .++|.++|..|. .+|. +|
T Consensus 114 yL~~-W~~~~snL~~ll~~l~-~~F~~ep 140 (146)
T 3obq_A 114 YLHE-WKHPQSDLLGLIQVMI-VVFGDEP 140 (146)
T ss_dssp HHHT-CCTTTCCHHHHHHHHH-HHHHHSC
T ss_pred cccc-cCCCCCCHHHHHHHHH-HHHhhCC
Confidence 9954 987 899999999995 5554 44
No 55
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.18 E-value=2.8e-12 Score=100.39 Aligned_cols=66 Identities=14% Similarity=0.209 Sum_probs=56.3
Q ss_pred cceEEEEecCCCCCCCCCCCCCCC-------CCCeeEEEEEecCCCCCCCCCCcEeeCCC-cccCCCCCCCCeEEeccCC
Q psy7478 62 RTLTFIRIGKPALKPRPTRCVEGE-------GAPTRTLSVQIPLHRVHEQGVPPVVYPPS-IYNHQSTLYSGTVCLNVIN 133 (180)
Q Consensus 62 ~~W~~~I~Gp~~~~~~p~tpy~gg-------g~~~f~~~I~fp~~YP~~~~pP~V~F~t~-IfHPnV~~~~G~vCl~~l~ 133 (180)
..|...+.|+. +|+|.|+ ..=.|.|.|.||.+||. .||.|.|.+. ++|||++ .+|+|||+++
T Consensus 58 ~dWf~~~sn~~------GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~--tPPeI~Fp~ldgkt~kmY-r~GkICLdIh- 127 (168)
T 3kpa_A 58 SHWFHLESNPQ------GTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQ--APPEIALPELEGKTVKMY-RGGKICMTTH- 127 (168)
T ss_dssp CCCEEEEECTT------SCEEEEEEEEEETTEEEEEEEEEECCTTTTT--SCCCCBCGGGTTTCSSEE-TTTEECCCTT-
T ss_pred CCeeeecCCCC------CCcccCccceeeccceeEEEEEEeCCccCCC--CCCEeecccccCcCcccc-CCCcEEeccc-
Confidence 37999999999 9999864 11158888999999999 9999999995 8999999 6999999986
Q ss_pred CCCCCC
Q psy7478 134 QEWTPL 139 (180)
Q Consensus 134 e~WsP~ 139 (180)
|+|+
T Consensus 128 --wkPl 131 (168)
T 3kpa_A 128 --FFPL 131 (168)
T ss_dssp --HHHH
T ss_pred --cchh
Confidence 6654
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.90 E-value=0.83 Score=33.10 Aligned_cols=23 Identities=13% Similarity=-0.022 Sum_probs=20.1
Q ss_pred eeEEEEEecCCCCCCCCCCcEeeCC
Q psy7478 89 TRTLSVQIPLHRVHEQGVPPVVYPP 113 (180)
Q Consensus 89 ~f~~~I~fp~~YP~~~~pP~V~F~t 113 (180)
.+.|.|.||.+||. .||.|.+.+
T Consensus 56 ~~~L~v~~p~~YP~--~~P~i~l~~ 78 (128)
T 2ebm_A 56 QTTLKFTYSEKYPD--EAPLYEIFS 78 (128)
T ss_dssp BEEEEEECCSSTTT--SCCEEEEEE
T ss_pred eEEEEEEeCCCCCC--CCceEEEEc
Confidence 67899999999999 999987643
No 57
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=82.36 E-value=4.3 Score=32.20 Aligned_cols=48 Identities=17% Similarity=0.325 Sum_probs=36.8
Q ss_pred eeEEEEEecCCCCCCCCCCcEeeCCCcccCCCCCCCCeEEeccCCCCCCCCCChHHHHHHHHHHHh
Q psy7478 89 TRTLSVQIPLHRVHEQGVPPVVYPPSIYNHQSTLYSGTVCLNVINQEWTPLYDLSNIFETFLPQLL 154 (180)
Q Consensus 89 ~f~~~I~fp~~YP~~~~pP~V~F~t~IfHPnV~~~~G~vCl~~l~e~WsP~~tl~~iL~~Ii~~ll 154 (180)
...++|.++.+||. .+|.+...-|+ |. .-.|+|..+|.+++..+. .++
T Consensus 39 ~H~l~v~l~~~yp~--~~P~~~~DlP~--~~-------------~~~w~~~ssL~~v~~qF~-~~L 86 (186)
T 3zqs_A 39 EHLITLKLKAKYPA--ESPDYFVDFPV--PF-------------CASWTPQSSLISIYSQFL-AAI 86 (186)
T ss_dssp EEEEEEECCTTTTT--SCCEEECCCSS--CC-------------CCCCCTTCCHHHHHHHHH-HHH
T ss_pred eEEEEEEECCCCCC--CCCeeEEcCCC--Cc-------------ccccCCCccHHHHHHHHH-HHH
Confidence 78899999999999 99988755543 11 136999999999988874 444
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=81.81 E-value=0.81 Score=33.15 Aligned_cols=23 Identities=30% Similarity=0.410 Sum_probs=20.4
Q ss_pred eeEEEEEecCCCCCCCCCCcEeeCC
Q psy7478 89 TRTLSVQIPLHRVHEQGVPPVVYPP 113 (180)
Q Consensus 89 ~f~~~I~fp~~YP~~~~pP~V~F~t 113 (180)
.+.|.|.||.+||. .+|.|.+.+
T Consensus 60 ~~~L~~~~p~~YP~--~~P~i~~~~ 82 (128)
T 2day_A 60 CFTLVLQVPAEYPH--EVPQISIRN 82 (128)
T ss_dssp EEEEEEEECSSTTS--SCCEEEEEE
T ss_pred eEEEEEEcCCCCCC--CCCCeEEEc
Confidence 78899999999999 999998665
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=81.55 E-value=1 Score=33.15 Aligned_cols=23 Identities=13% Similarity=0.138 Sum_probs=20.3
Q ss_pred eeEEEEEecCCCCCCCCCCcEeeCC
Q psy7478 89 TRTLSVQIPLHRVHEQGVPPVVYPP 113 (180)
Q Consensus 89 ~f~~~I~fp~~YP~~~~pP~V~F~t 113 (180)
.+.|.|.||.+||. .+|.|.+.+
T Consensus 63 ~~~L~~~~p~~YP~--~~P~i~l~~ 85 (138)
T 2yz0_A 63 SITLHFAMTPMYPY--TAPEIEFKN 85 (138)
T ss_dssp EEEEEEECCSSTTS--SCCEEEEEC
T ss_pred EEEEEEECCCCCCC--CCCeEEEec
Confidence 67889999999999 999998754
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.90 E-value=1.2 Score=32.40 Aligned_cols=22 Identities=14% Similarity=0.274 Sum_probs=19.5
Q ss_pred eeEEEEEecCCCCCCCCCCcEeeC
Q psy7478 89 TRTLSVQIPLHRVHEQGVPPVVYP 112 (180)
Q Consensus 89 ~f~~~I~fp~~YP~~~~pP~V~F~ 112 (180)
.+.|.|.||.+||. .+|.|...
T Consensus 57 ~~~L~~~~p~~YP~--~~P~i~l~ 78 (128)
T 2ebk_A 57 PLELVFHLPVNYPS--CLPGISIN 78 (128)
T ss_dssp EEEEEEEECSSTTS--SCCCCCCC
T ss_pred EEEEEEECCCCCCC--CCCeEEEE
Confidence 68899999999999 89998755
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=78.97 E-value=6.8 Score=29.49 Aligned_cols=23 Identities=13% Similarity=-0.025 Sum_probs=20.3
Q ss_pred eeEEEEEecCCCCCCCCCCcEeeCC
Q psy7478 89 TRTLSVQIPLHRVHEQGVPPVVYPP 113 (180)
Q Consensus 89 ~f~~~I~fp~~YP~~~~pP~V~F~t 113 (180)
.+.|.|.+|.+||. .+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~--~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPY--LALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTS--SCCEEEEEC
T ss_pred eEEEEEEcCCCCCC--CCCcEEEEe
Confidence 68899999999999 899998554
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=78.49 E-value=1.1 Score=32.82 Aligned_cols=22 Identities=23% Similarity=0.215 Sum_probs=19.6
Q ss_pred eeEEEEEecCCCCCCCCCCcEeeC
Q psy7478 89 TRTLSVQIPLHRVHEQGVPPVVYP 112 (180)
Q Consensus 89 ~f~~~I~fp~~YP~~~~pP~V~F~ 112 (180)
.+.|.|.||.+||. .+|.|.+.
T Consensus 64 ~~~L~v~~p~~YP~--~~P~i~l~ 85 (137)
T 1ukx_A 64 QVELRVKCPPTYPD--VVPEIDLK 85 (137)
T ss_dssp EEEEEECCCTTTTS--SCCCCEEE
T ss_pred EEEEEEECCCCCCC--CCCcEEEe
Confidence 68899999999999 99998764
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=75.62 E-value=1.8 Score=32.51 Aligned_cols=24 Identities=13% Similarity=0.218 Sum_probs=20.6
Q ss_pred eeEEEEEecCCCCCCCCCCcEeeCCC
Q psy7478 89 TRTLSVQIPLHRVHEQGVPPVVYPPS 114 (180)
Q Consensus 89 ~f~~~I~fp~~YP~~~~pP~V~F~t~ 114 (180)
.+.|.|.+|.+||. .||.|.....
T Consensus 74 ~l~L~v~lP~~YP~--~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPA--VLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTS--SCCCCEEECT
T ss_pred eEEEEEECCCCCCC--CCCeEEEEcc
Confidence 68889999999999 8999986653
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=20.06 E-value=22 Score=25.67 Aligned_cols=26 Identities=12% Similarity=0.128 Sum_probs=0.0
Q ss_pred hcCCCCCCCccHHHHHHHhhCHHhHh
Q psy7478 154 LTYPNPTDPLNGDAAAMYLDKPDKYK 179 (180)
Q Consensus 154 l~~P~~~~p~N~eaA~ly~~d~~~F~ 179 (180)
|.--....|.+..+|++|.+|++.|.
T Consensus 18 ~~~~~~~~PQDA~VA~qy~~~~~~f~ 43 (108)
T 2cwb_A 18 LKGETTTEAVDAATAEKVFKQYANDN 43 (108)
T ss_dssp --------------------------
T ss_pred ccCcccCCchhHHHHHHHHhchhccc
Confidence 44445667999999999999999885
Done!