Query psy7482
Match_columns 327
No_of_seqs 892 out of 1387
Neff 11.8
Searched_HMMs 29240
Date Fri Aug 16 19:27:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7482.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7482hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.6E-53 5.4E-58 359.1 37.4 282 8-298 102-410 (410)
2 3ow8_A WD repeat-containing pr 100.0 7.4E-53 2.5E-57 343.5 40.0 281 9-298 27-320 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 9.5E-51 3.2E-55 334.1 41.4 281 6-296 47-340 (340)
4 2ynn_A Coatomer subunit beta'; 100.0 5.1E-51 1.7E-55 330.5 38.8 289 1-300 2-303 (304)
5 4ery_A WD repeat-containing pr 100.0 1.7E-49 5.9E-54 323.0 41.4 285 6-298 15-311 (312)
6 2pbi_B Guanine nucleotide-bind 100.0 1.8E-49 6.1E-54 328.0 39.5 281 7-296 57-354 (354)
7 1nr0_A Actin interacting prote 100.0 1.3E-49 4.4E-54 351.6 39.1 312 9-326 142-593 (611)
8 3iz6_a 40S ribosomal protein R 100.0 2.8E-50 9.6E-55 336.2 32.9 289 8-300 60-376 (380)
9 4gqb_B Methylosome protein 50; 100.0 3E-49 1E-53 324.5 35.0 280 11-301 27-333 (344)
10 3frx_A Guanine nucleotide-bind 100.0 5.3E-48 1.8E-52 314.9 41.0 283 6-300 9-318 (319)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.5E-48 8.7E-53 320.2 39.5 290 3-300 6-336 (345)
12 1erj_A Transcriptional repress 100.0 2.3E-48 8E-53 326.0 39.0 278 12-300 62-390 (393)
13 2xzm_R RACK1; ribosome, transl 100.0 3.3E-48 1.1E-52 319.4 38.7 286 5-300 12-341 (343)
14 4g56_B MGC81050 protein; prote 100.0 4.7E-49 1.6E-53 325.7 32.5 280 11-300 39-344 (357)
15 2ynn_A Coatomer subunit beta'; 100.0 2.1E-47 7.3E-52 309.3 38.7 270 45-325 4-281 (304)
16 2hes_X YDR267CP; beta-propelle 100.0 2.1E-47 7.1E-52 312.8 39.0 288 3-300 5-329 (330)
17 1nr0_A Actin interacting prote 100.0 1.2E-46 4.1E-51 332.6 40.7 309 2-325 4-378 (611)
18 2ymu_A WD-40 repeat protein; u 100.0 3.5E-46 1.2E-50 328.2 43.2 307 6-326 8-356 (577)
19 1vyh_C Platelet-activating fac 100.0 1.5E-46 5.2E-51 316.5 36.8 267 47-326 101-392 (410)
20 3ow8_A WD repeat-containing pr 100.0 5.3E-46 1.8E-50 303.0 37.6 268 46-326 24-302 (321)
21 1sq9_A Antiviral protein SKI8; 100.0 2.2E-46 7.5E-51 314.7 36.4 290 6-300 8-396 (397)
22 2ymu_A WD-40 repeat protein; u 100.0 2.4E-45 8E-50 323.0 44.5 298 9-326 257-561 (577)
23 3zwl_B Eukaryotic translation 100.0 1E-45 3.4E-50 307.4 39.4 291 4-300 22-347 (369)
24 1r5m_A SIR4-interacting protei 100.0 5.5E-46 1.9E-50 314.8 36.7 316 5-326 36-406 (425)
25 4aow_A Guanine nucleotide-bind 100.0 5.9E-45 2E-49 299.7 41.0 282 9-300 33-338 (340)
26 3odt_A Protein DOA1; ubiquitin 100.0 9.8E-45 3.4E-49 294.9 38.5 276 9-300 13-297 (313)
27 1gxr_A ESG1, transducin-like e 100.0 3E-44 1E-48 295.0 41.4 280 7-298 44-336 (337)
28 1got_B GT-beta; complex (GTP-b 100.0 8.7E-45 3E-49 298.6 37.6 273 45-326 46-324 (340)
29 3v7d_B Cell division control p 100.0 1.2E-44 4.2E-49 310.3 40.1 305 8-326 115-445 (464)
30 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.7E-44 9.4E-49 306.4 41.3 298 9-326 113-419 (445)
31 3dm0_A Maltose-binding peripla 100.0 9.4E-45 3.2E-49 325.3 40.0 283 9-299 377-693 (694)
32 3k26_A Polycomb protein EED; W 100.0 2.2E-45 7.4E-50 305.2 32.3 283 11-298 15-365 (366)
33 4gqb_B Methylosome protein 50; 100.0 3.5E-45 1.2E-49 300.3 31.8 277 36-326 16-311 (344)
34 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-44 4.5E-49 301.2 34.8 284 12-300 6-362 (372)
35 3ei3_B DNA damage-binding prot 100.0 3.1E-44 1.1E-48 300.3 37.2 277 9-299 68-382 (383)
36 4g56_B MGC81050 protein; prote 100.0 1.8E-45 6.3E-50 304.2 29.1 286 25-324 17-321 (357)
37 3i2n_A WD repeat-containing pr 100.0 7.7E-45 2.6E-49 300.9 32.8 286 10-300 14-354 (357)
38 1p22_A F-BOX/WD-repeat protein 100.0 1.5E-44 5.1E-49 307.1 33.8 295 10-324 129-434 (435)
39 3vl1_A 26S proteasome regulato 100.0 1E-44 3.6E-49 306.8 32.7 300 17-326 59-397 (420)
40 2pm9_A Protein WEB1, protein t 100.0 3.2E-45 1.1E-49 309.5 28.5 282 13-301 11-339 (416)
41 2pbi_B Guanine nucleotide-bind 100.0 1.1E-43 3.9E-48 293.3 36.9 274 45-326 55-338 (354)
42 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.6E-43 5.4E-48 291.6 37.0 276 45-326 6-315 (345)
43 3iz6_a 40S ribosomal protein R 100.0 7.2E-45 2.5E-49 303.5 27.7 287 34-326 46-356 (380)
44 1r5m_A SIR4-interacting protei 100.0 2E-43 7E-48 299.0 36.9 276 13-298 107-424 (425)
45 1gxr_A ESG1, transducin-like e 100.0 9.7E-44 3.3E-48 291.9 33.4 302 11-326 6-318 (337)
46 3mkq_A Coatomer beta'-subunit; 100.0 3.5E-43 1.2E-47 320.9 40.1 288 2-300 3-303 (814)
47 3sfz_A APAF-1, apoptotic pepti 100.0 4.5E-43 1.5E-47 333.2 41.9 306 7-326 608-1056(1249)
48 4aez_A CDC20, WD repeat-contai 100.0 5.1E-43 1.7E-47 294.6 37.6 283 6-300 83-381 (401)
49 4ery_A WD repeat-containing pr 100.0 8E-43 2.7E-47 283.7 37.5 269 45-326 14-291 (312)
50 3dwl_C Actin-related protein 2 100.0 5.5E-45 1.9E-49 304.2 24.9 277 12-297 9-377 (377)
51 3vl1_A 26S proteasome regulato 100.0 4.1E-43 1.4E-47 297.0 34.7 272 23-299 108-419 (420)
52 2hes_X YDR267CP; beta-propelle 100.0 2.2E-42 7.5E-47 283.0 35.0 274 43-324 3-305 (330)
53 2pm9_A Protein WEB1, protein t 100.0 1.8E-44 6.1E-49 304.9 23.1 287 11-300 64-415 (416)
54 3gre_A Serine/threonine-protei 100.0 9.4E-43 3.2E-47 296.3 33.7 278 11-296 60-437 (437)
55 2xzm_R RACK1; ribosome, transl 100.0 1.2E-41 4E-46 280.3 37.4 271 45-326 12-321 (343)
56 4e54_B DNA damage-binding prot 100.0 3.3E-43 1.1E-47 298.7 28.7 280 11-300 116-431 (435)
57 4h5i_A Guanine nucleotide-exch 100.0 7.4E-43 2.5E-47 289.4 29.9 276 14-300 14-344 (365)
58 3frx_A Guanine nucleotide-bind 100.0 1.2E-41 4.1E-46 277.3 36.5 269 45-326 8-298 (319)
59 1pgu_A Actin interacting prote 100.0 1.3E-41 4.3E-46 301.3 38.4 310 8-326 154-596 (615)
60 1erj_A Transcriptional repress 100.0 1.8E-41 6.3E-46 284.2 37.2 278 35-325 41-363 (393)
61 2oaj_A Protein SNI1; WD40 repe 100.0 1.8E-41 6.1E-46 310.0 40.3 226 3-236 7-281 (902)
62 4gga_A P55CDC, cell division c 100.0 3.4E-41 1.2E-45 285.1 38.9 272 17-300 108-396 (420)
63 2ovr_B FBW7, F-BOX/WD repeat p 100.0 7.9E-41 2.7E-45 285.1 40.0 275 8-300 153-443 (445)
64 1pgu_A Actin interacting prote 100.0 5.5E-41 1.9E-45 297.2 39.4 306 2-325 4-349 (615)
65 2pm7_B Protein transport prote 100.0 1.8E-41 6E-46 273.7 32.7 243 9-258 4-284 (297)
66 3sfz_A APAF-1, apoptotic pepti 100.0 4.8E-41 1.6E-45 319.4 40.9 311 7-326 650-1097(1249)
67 4aow_A Guanine nucleotide-bind 100.0 9.9E-41 3.4E-45 274.5 37.4 275 42-326 26-318 (340)
68 2pm7_B Protein transport prote 100.0 5E-41 1.7E-45 271.0 34.1 246 48-300 3-286 (297)
69 1yfq_A Cell cycle arrest prote 100.0 2.6E-41 8.9E-46 278.2 32.0 273 11-297 8-322 (342)
70 3dw8_B Serine/threonine-protei 100.0 4.5E-41 1.5E-45 286.7 33.9 290 2-298 12-445 (447)
71 2oaj_A Protein SNI1; WD40 repe 100.0 3.9E-41 1.3E-45 307.8 35.3 304 13-323 97-631 (902)
72 3mmy_A MRNA export factor; mRN 100.0 7.7E-41 2.7E-45 277.9 33.7 280 9-300 34-347 (368)
73 4ggc_A P55CDC, cell division c 100.0 9E-40 3.1E-44 266.3 38.9 272 17-300 28-316 (318)
74 4a11_B DNA excision repair pro 100.0 6.3E-40 2.1E-44 276.2 37.6 283 9-300 38-366 (408)
75 2j04_B YDR362CP, TAU91; beta p 100.0 1.2E-41 4.2E-46 292.6 26.3 263 28-300 177-518 (524)
76 3bg1_A Protein SEC13 homolog; 100.0 3.3E-41 1.1E-45 274.3 27.4 243 10-258 9-292 (316)
77 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-40 4.6E-45 274.3 31.2 287 10-300 7-338 (351)
78 3bg1_A Protein SEC13 homolog; 100.0 7.1E-41 2.4E-45 272.4 28.8 245 49-300 8-294 (316)
79 3v7d_B Cell division control p 100.0 2.1E-39 7.2E-44 277.8 38.1 276 8-297 156-461 (464)
80 1k8k_C P40, ARP2/3 complex 41 100.0 1.5E-39 5.3E-44 270.6 35.2 242 50-299 4-274 (372)
81 3zwl_B Eukaryotic translation 100.0 5.5E-39 1.9E-43 266.8 38.5 265 47-326 25-327 (369)
82 3gre_A Serine/threonine-protei 100.0 2.5E-40 8.5E-45 281.4 29.1 271 23-301 38-361 (437)
83 1sq9_A Antiviral protein SKI8; 100.0 1E-39 3.6E-44 274.1 31.9 271 47-325 9-365 (397)
84 3mkq_A Coatomer beta'-subunit; 100.0 4.1E-39 1.4E-43 294.1 37.9 271 45-326 4-282 (814)
85 3ei3_B DNA damage-binding prot 100.0 8.1E-40 2.8E-44 273.5 29.4 273 43-326 62-364 (383)
86 2aq5_A Coronin-1A; WD40 repeat 100.0 3E-39 1E-43 271.7 30.3 274 18-300 38-343 (402)
87 3odt_A Protein DOA1; ubiquitin 100.0 6.5E-38 2.2E-42 254.7 36.9 264 45-326 9-278 (313)
88 3dm0_A Maltose-binding peripla 100.0 1.7E-38 5.7E-43 284.9 36.2 243 48-300 376-633 (694)
89 3jrp_A Fusion protein of prote 100.0 8.8E-39 3E-43 266.6 32.2 250 44-300 1-288 (379)
90 3jrp_A Fusion protein of prote 100.0 1.5E-38 5.2E-43 265.1 32.3 246 9-261 6-289 (379)
91 4gga_A P55CDC, cell division c 100.0 3.2E-38 1.1E-42 266.9 34.5 262 3-271 136-407 (420)
92 3dw8_B Serine/threonine-protei 100.0 1.2E-38 4.2E-43 271.7 31.8 244 52-300 26-374 (447)
93 3i2n_A WD repeat-containing pr 100.0 3E-38 1E-42 261.3 31.0 269 49-326 13-333 (357)
94 4e54_B DNA damage-binding prot 100.0 7E-39 2.4E-43 272.1 27.3 267 49-325 114-411 (435)
95 3k26_A Polycomb protein EED; W 100.0 2.9E-38 1E-42 262.2 29.9 266 50-326 14-347 (366)
96 3dwl_C Actin-related protein 2 100.0 1E-39 3.6E-44 272.3 20.8 239 51-298 8-280 (377)
97 4aez_A CDC20, WD repeat-contai 100.0 2.8E-37 9.7E-42 259.6 34.5 245 12-267 132-388 (401)
98 2j04_B YDR362CP, TAU91; beta p 100.0 5.2E-39 1.8E-43 276.3 24.0 260 13-300 132-429 (524)
99 4h5i_A Guanine nucleotide-exch 100.0 3.9E-37 1.3E-41 255.1 34.4 247 5-260 64-344 (365)
100 1yfq_A Cell cycle arrest prote 100.0 7.5E-38 2.6E-42 257.6 29.9 259 49-321 6-301 (342)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.6E-37 2.3E-41 261.1 36.1 279 15-300 5-392 (450)
102 3mmy_A MRNA export factor; mRN 100.0 7.3E-37 2.5E-41 253.9 34.9 276 38-326 23-327 (368)
103 4a11_B DNA excision repair pro 100.0 9.7E-38 3.3E-42 262.8 28.2 281 33-326 22-346 (408)
104 2j04_A TAU60, YPL007P, hypothe 100.0 2.6E-38 8.8E-43 266.5 23.2 262 11-298 12-296 (588)
105 4ggc_A P55CDC, cell division c 100.0 1.9E-36 6.4E-41 246.6 33.4 253 3-261 56-317 (318)
106 3bws_A Protein LP49; two-domai 100.0 4.1E-36 1.4E-40 255.1 36.6 273 15-299 123-432 (433)
107 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-36 4.5E-41 251.1 32.1 246 38-301 3-273 (355)
108 3lrv_A PRE-mRNA-splicing facto 100.0 2.2E-37 7.6E-42 254.8 27.4 261 23-300 47-334 (343)
109 1l0q_A Surface layer protein; 100.0 3.8E-35 1.3E-39 245.9 40.8 263 24-300 2-276 (391)
110 1p22_A F-BOX/WD-repeat protein 100.0 9.4E-36 3.2E-40 253.0 34.2 257 52-326 131-397 (435)
111 3jro_A Fusion protein of prote 100.0 4E-37 1.4E-41 277.6 26.5 243 10-259 5-285 (753)
112 2xyi_A Probable histone-bindin 100.0 1.8E-36 6.2E-41 256.8 28.5 248 49-300 123-411 (430)
113 3jro_A Fusion protein of prote 100.0 4.8E-37 1.6E-41 277.1 26.4 246 48-300 3-286 (753)
114 2xyi_A Probable histone-bindin 100.0 5E-36 1.7E-40 254.2 30.1 243 9-260 123-411 (430)
115 3vu4_A KMHSV2; beta-propeller 100.0 3.5E-35 1.2E-39 242.6 33.4 271 10-301 15-338 (355)
116 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3E-35 1E-39 250.9 32.7 262 54-325 4-365 (450)
117 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-35 5.5E-40 249.1 30.2 261 56-326 36-325 (402)
118 2j04_A TAU60, YPL007P, hypothe 100.0 5.4E-37 1.8E-41 258.5 18.7 276 11-326 49-342 (588)
119 1l0q_A Surface layer protein; 100.0 8.1E-33 2.8E-37 231.7 41.4 275 12-300 30-343 (391)
120 4gq1_A NUP37; propeller, trans 100.0 2.9E-34 9.9E-39 240.3 26.7 229 63-298 98-388 (393)
121 4gq1_A NUP37; propeller, trans 100.0 6.7E-35 2.3E-39 244.2 22.3 230 23-257 100-387 (393)
122 3f3f_A Nucleoporin SEH1; struc 100.0 2.7E-33 9.1E-38 230.6 29.0 267 48-326 5-318 (351)
123 3bws_A Protein LP49; two-domai 100.0 4.9E-32 1.7E-36 230.0 37.1 276 35-326 102-412 (433)
124 3lrv_A PRE-mRNA-splicing facto 100.0 6.2E-34 2.1E-38 234.3 23.5 227 60-300 42-293 (343)
125 2w18_A PALB2, fancn, partner a 100.0 8.3E-33 2.8E-37 219.4 28.1 259 26-298 56-356 (356)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.3E-32 1.5E-36 228.5 29.6 293 15-326 63-409 (415)
127 1nir_A Nitrite reductase; hemo 100.0 7.1E-31 2.4E-35 227.5 35.0 298 20-326 145-490 (543)
128 2w18_A PALB2, fancn, partner a 100.0 1.3E-30 4.4E-35 207.0 27.9 242 6-257 78-355 (356)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.6E-30 8.8E-35 217.6 27.9 256 10-280 113-407 (415)
130 1nir_A Nitrite reductase; hemo 100.0 1.4E-28 4.8E-33 213.2 36.9 276 17-300 181-515 (543)
131 1ri6_A Putative isomerase YBHE 100.0 1.2E-28 4E-33 202.6 32.0 286 26-325 7-333 (343)
132 3u4y_A Uncharacterized protein 100.0 4.9E-28 1.7E-32 198.1 34.5 266 23-300 9-305 (331)
133 2ecf_A Dipeptidyl peptidase IV 100.0 3.7E-29 1.3E-33 226.2 29.4 301 14-326 36-436 (741)
134 1pby_B Quinohemoprotein amine 100.0 5.4E-28 1.8E-32 198.2 28.4 263 25-300 2-311 (337)
135 2ojh_A Uncharacterized protein 100.0 7.5E-28 2.6E-32 193.5 26.3 250 29-290 17-293 (297)
136 1xfd_A DIP, dipeptidyl aminope 100.0 8E-28 2.7E-32 216.9 24.8 305 15-325 17-420 (723)
137 1k32_A Tricorn protease; prote 100.0 5.1E-26 1.7E-30 212.5 35.1 305 9-326 47-483 (1045)
138 2z3z_A Dipeptidyl aminopeptida 100.0 2.2E-26 7.5E-31 207.0 30.2 291 20-326 31-412 (706)
139 3vgz_A Uncharacterized protein 100.0 5.6E-25 1.9E-29 181.5 34.5 267 13-290 39-335 (353)
140 3vgz_A Uncharacterized protein 100.0 4E-25 1.4E-29 182.3 33.5 262 53-326 39-325 (353)
141 2z3z_A Dipeptidyl aminopeptida 100.0 2.2E-25 7.6E-30 200.5 30.6 274 15-300 82-436 (706)
142 1jmx_B Amine dehydrogenase; ox 100.0 5.1E-25 1.7E-29 181.4 29.6 268 23-300 10-326 (349)
143 1ri6_A Putative isomerase YBHE 99.9 1.8E-24 6E-29 177.7 31.9 259 12-280 35-332 (343)
144 3hfq_A Uncharacterized protein 99.9 7.9E-24 2.7E-28 174.3 35.6 263 32-299 14-317 (347)
145 1k32_A Tricorn protease; prote 99.9 2.4E-25 8.3E-30 207.9 29.7 274 11-300 200-503 (1045)
146 2ecf_A Dipeptidyl peptidase IV 99.9 4.4E-25 1.5E-29 199.6 29.9 273 16-299 110-459 (741)
147 3scy_A Hypothetical bacterial 99.9 1.2E-23 4.1E-28 174.2 34.6 292 26-324 15-361 (361)
148 3u4y_A Uncharacterized protein 99.9 4.4E-24 1.5E-28 174.6 30.3 242 13-261 39-306 (331)
149 2ojh_A Uncharacterized protein 99.9 1.5E-24 5.1E-29 174.2 25.5 242 71-326 17-283 (297)
150 3o4h_A Acylamino-acid-releasin 99.9 1E-24 3.5E-29 191.8 24.6 265 13-298 20-314 (582)
151 1pby_B Quinohemoprotein amine 99.9 4.6E-24 1.6E-28 174.7 25.7 239 16-271 35-322 (337)
152 3hfq_A Uncharacterized protein 99.9 6E-23 2.1E-27 169.0 30.1 247 12-263 37-323 (347)
153 2oit_A Nucleoporin 214KDA; NH2 99.9 5.7E-23 2E-27 173.5 29.6 193 15-216 37-279 (434)
154 1z68_A Fibroblast activation p 99.9 1.7E-24 5.8E-29 195.1 20.4 299 19-325 20-420 (719)
155 1xfd_A DIP, dipeptidyl aminope 99.9 2.6E-24 8.9E-29 194.0 21.4 258 56-325 18-370 (723)
156 3o4h_A Acylamino-acid-releasin 99.9 1.2E-23 4.2E-28 185.0 23.4 246 53-323 20-291 (582)
157 1jof_A Carboxy-CIS,CIS-muconat 99.9 7.6E-22 2.6E-26 163.5 31.9 270 26-300 4-342 (365)
158 2oiz_A Aromatic amine dehydrog 99.9 2.2E-21 7.4E-26 160.1 32.1 285 23-325 14-358 (361)
159 3scy_A Hypothetical bacterial 99.9 6.1E-21 2.1E-25 157.9 32.0 258 13-279 48-360 (361)
160 3pe7_A Oligogalacturonate lyas 99.9 4.4E-22 1.5E-26 166.3 25.0 281 9-300 25-383 (388)
161 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-22 5.6E-27 170.7 21.5 196 101-300 39-279 (434)
162 4a5s_A Dipeptidyl peptidase 4 99.9 4.5E-22 1.5E-26 179.6 23.7 304 14-326 16-427 (740)
163 3pe7_A Oligogalacturonate lyas 99.9 2.4E-21 8.2E-26 161.9 25.7 276 38-326 14-362 (388)
164 1z68_A Fibroblast activation p 99.9 2.4E-22 8.1E-27 181.1 17.9 232 59-300 20-347 (719)
165 3azo_A Aminopeptidase; POP fam 99.9 1.6E-20 5.5E-25 167.7 27.9 278 11-300 20-370 (662)
166 1jmx_B Amine dehydrogenase; ox 99.9 2.7E-20 9.2E-25 153.1 26.7 245 16-269 44-335 (349)
167 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.2E-20 7.6E-25 154.7 25.3 241 15-260 40-342 (365)
168 1q7f_A NHL, brain tumor CG1071 99.9 5.9E-19 2E-23 141.1 31.9 238 12-261 27-282 (286)
169 3no2_A Uncharacterized protein 99.9 2.9E-19 9.9E-24 141.5 28.1 240 23-270 4-263 (276)
170 3fvz_A Peptidyl-glycine alpha- 99.9 5.5E-19 1.9E-23 144.1 30.1 242 54-300 23-323 (329)
171 2gop_A Trilobed protease; beta 99.9 4.8E-19 1.6E-23 145.6 29.9 256 15-298 15-330 (347)
172 3fvz_A Peptidyl-glycine alpha- 99.9 4.9E-19 1.7E-23 144.4 29.0 242 14-259 23-322 (329)
173 2dg1_A DRP35, lactonase; beta 99.9 6.8E-19 2.3E-23 143.9 28.2 264 15-290 6-301 (333)
174 1q7f_A NHL, brain tumor CG1071 99.9 4.8E-18 1.6E-22 135.8 32.4 237 52-300 27-281 (286)
175 3dsm_A Uncharacterized protein 99.9 1.3E-18 4.4E-23 141.8 29.3 258 32-298 15-301 (328)
176 4a5s_A Dipeptidyl peptidase 4 99.9 1.7E-19 5.9E-24 162.8 25.0 234 56-300 18-354 (740)
177 3c5m_A Oligogalacturonate lyas 99.9 3.8E-20 1.3E-24 154.9 19.2 269 17-299 38-382 (396)
178 2oiz_A Aromatic amine dehydrog 99.9 1.1E-18 3.7E-23 144.0 26.7 257 12-280 49-357 (361)
179 1qks_A Cytochrome CD1 nitrite 99.8 8.5E-17 2.9E-21 139.3 38.0 298 23-325 166-513 (567)
180 3c5m_A Oligogalacturonate lyas 99.8 2.5E-19 8.4E-24 150.0 21.5 250 38-300 14-330 (396)
181 3dsm_A Uncharacterized protein 99.8 1E-17 3.5E-22 136.5 29.8 249 15-279 44-320 (328)
182 3e5z_A Putative gluconolactona 99.8 9.2E-18 3.2E-22 134.9 28.4 240 48-300 21-287 (296)
183 3azo_A Aminopeptidase; POP fam 99.8 2.3E-18 7.7E-23 153.8 25.9 246 48-299 17-323 (662)
184 2z2n_A Virginiamycin B lyase; 99.8 9.7E-16 3.3E-20 123.0 38.6 280 6-300 6-296 (299)
185 3e5z_A Putative gluconolactona 99.8 3.1E-17 1.1E-21 131.7 29.6 236 12-262 25-289 (296)
186 2xdw_A Prolyl endopeptidase; a 99.8 1.2E-16 3.9E-21 143.8 35.1 272 22-300 81-415 (710)
187 2dg1_A DRP35, lactonase; beta 99.8 2.8E-16 9.7E-21 128.3 32.4 231 10-249 40-300 (333)
188 2bkl_A Prolyl endopeptidase; m 99.8 1.9E-17 6.6E-22 148.4 27.2 272 21-300 76-398 (695)
189 3sjl_D Methylamine dehydrogena 99.8 1.8E-16 6.1E-21 129.3 29.3 285 23-325 43-384 (386)
190 2gop_A Trilobed protease; beta 99.8 9.4E-17 3.2E-21 131.9 27.5 239 55-324 15-311 (347)
191 2bkl_A Prolyl endopeptidase; m 99.8 1.5E-17 5E-22 149.2 24.5 274 12-298 118-436 (695)
192 2xdw_A Prolyl endopeptidase; a 99.8 1.3E-16 4.5E-21 143.4 29.8 240 12-261 122-416 (710)
193 1qks_A Cytochrome CD1 nitrite 99.8 3.1E-15 1.1E-19 129.6 35.6 278 16-300 198-539 (567)
194 3no2_A Uncharacterized protein 99.8 6.9E-16 2.4E-20 122.1 27.9 209 65-286 4-230 (276)
195 1rwi_B Serine/threonine-protei 99.8 2.4E-16 8.3E-21 124.8 25.2 237 16-262 25-267 (270)
196 1rwi_B Serine/threonine-protei 99.8 5.1E-16 1.7E-20 122.9 26.0 235 56-300 25-265 (270)
197 2qc5_A Streptogramin B lactona 99.8 5.1E-14 1.7E-18 113.0 37.9 277 6-297 11-298 (300)
198 2mad_H Methylamine dehydrogena 99.8 4E-14 1.4E-18 116.9 35.8 261 23-300 31-351 (373)
199 2z2n_A Virginiamycin B lyase; 99.8 6.4E-14 2.2E-18 112.4 34.9 257 52-325 12-276 (299)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.2E-14 4.2E-19 117.5 30.1 238 55-300 18-300 (314)
201 1yr2_A Prolyl oligopeptidase; 99.7 7.5E-15 2.6E-19 132.6 30.1 271 21-300 115-442 (741)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 3E-14 1E-18 115.3 29.5 236 13-259 16-299 (314)
203 3c75_H MADH, methylamine dehyd 99.7 2.8E-14 9.5E-19 118.5 28.3 263 23-300 83-403 (426)
204 3q7m_A Lipoprotein YFGL, BAMB; 99.7 8.5E-14 2.9E-18 115.6 30.2 265 23-300 52-338 (376)
205 1yr2_A Prolyl oligopeptidase; 99.7 1.3E-14 4.3E-19 131.1 26.6 238 12-261 160-443 (741)
206 3sjl_D Methylamine dehydrogena 99.7 7E-14 2.4E-18 114.1 26.4 241 20-269 83-373 (386)
207 2qc5_A Streptogramin B lactona 99.7 1.6E-12 5.5E-17 104.2 34.3 257 53-325 18-282 (300)
208 3g4e_A Regucalcin; six bladed 99.7 7.1E-13 2.4E-17 106.3 31.4 217 55-280 13-251 (297)
209 3q7m_A Lipoprotein YFGL, BAMB; 99.7 3E-13 1E-17 112.3 29.3 267 20-296 99-375 (376)
210 3hxj_A Pyrrolo-quinoline quino 99.7 5.7E-14 2E-18 114.4 24.4 264 14-300 59-325 (330)
211 3hrp_A Uncharacterized protein 99.7 6.9E-13 2.4E-17 111.0 30.5 232 55-297 131-408 (409)
212 1mda_H Methylamine dehydrogena 99.6 1.3E-13 4.4E-18 112.7 24.2 273 26-325 34-367 (368)
213 3hrp_A Uncharacterized protein 99.6 1.7E-12 5.9E-17 108.6 31.0 236 15-257 131-408 (409)
214 2ghs_A AGR_C_1268P; regucalcin 99.6 2.7E-12 9.4E-17 104.3 30.8 219 57-287 51-290 (326)
215 3g4e_A Regucalcin; six bladed 99.6 2.4E-12 8.2E-17 103.2 29.8 223 13-247 11-260 (297)
216 1xip_A Nucleoporin NUP159; bet 99.6 7.1E-14 2.4E-18 114.5 20.9 167 16-201 39-230 (388)
217 2hz6_A Endoplasmic reticulum t 99.6 2.9E-18 9.8E-23 141.8 -5.5 259 22-299 7-279 (369)
218 1yiq_A Quinohemoprotein alcoho 99.6 6.1E-13 2.1E-17 118.5 28.1 264 21-288 118-538 (689)
219 3dr2_A Exported gluconolactona 99.6 1.1E-12 3.9E-17 105.5 26.6 224 13-251 43-299 (305)
220 3dr2_A Exported gluconolactona 99.6 9.6E-13 3.3E-17 106.0 26.0 231 47-291 37-299 (305)
221 1yiq_A Quinohemoprotein alcoho 99.6 7.6E-13 2.6E-17 117.9 26.9 272 23-300 69-506 (689)
222 2mad_H Methylamine dehydrogena 99.6 1.4E-11 4.6E-16 101.8 32.2 248 62-325 28-328 (373)
223 3hxj_A Pyrrolo-quinoline quino 99.6 1.3E-13 4.6E-18 112.2 18.9 256 19-297 24-282 (330)
224 1kb0_A Quinohemoprotein alcoho 99.6 3.2E-12 1.1E-16 113.6 28.7 276 20-300 124-568 (677)
225 3iuj_A Prolyl endopeptidase; h 99.6 2.3E-12 8E-17 115.4 27.9 238 53-300 127-406 (693)
226 1xip_A Nucleoporin NUP159; bet 99.6 3.2E-13 1.1E-17 110.6 19.7 169 147-326 39-225 (388)
227 1kb0_A Quinohemoprotein alcoho 99.6 1.4E-12 4.7E-17 116.0 24.6 272 23-300 76-508 (677)
228 2ghs_A AGR_C_1268P; regucalcin 99.6 1E-11 3.6E-16 100.8 27.7 216 17-246 51-289 (326)
229 2qe8_A Uncharacterized protein 99.6 3.6E-12 1.2E-16 104.3 24.2 263 15-296 17-318 (343)
230 3c75_H MADH, methylamine dehyd 99.5 1.7E-11 5.8E-16 101.9 25.8 238 19-266 122-409 (426)
231 3iuj_A Prolyl endopeptidase; h 99.5 1.1E-11 3.8E-16 111.0 26.6 237 12-262 126-408 (693)
232 2hz6_A Endoplasmic reticulum t 99.5 3.6E-14 1.2E-18 117.2 7.1 190 65-270 8-203 (369)
233 2iwa_A Glutamine cyclotransfer 99.5 5.5E-11 1.9E-15 92.1 23.9 202 87-300 10-238 (266)
234 1kv9_A Type II quinohemoprotei 99.5 8.6E-11 2.9E-15 104.4 27.4 272 23-300 65-489 (668)
235 2qe8_A Uncharacterized protein 99.4 2E-11 7E-16 99.9 20.6 250 55-325 17-301 (343)
236 1fwx_A Nitrous oxide reductase 99.4 1.1E-10 3.7E-15 99.5 23.7 233 18-261 90-433 (595)
237 1fwx_A Nitrous oxide reductase 99.4 1.9E-10 6.5E-15 98.0 24.6 226 65-300 100-432 (595)
238 3nol_A Glutamine cyclotransfer 99.4 2.7E-10 9.3E-15 87.1 22.9 189 87-287 32-244 (262)
239 4a2l_A BT_4663, two-component 99.4 1.2E-08 4.2E-13 93.0 38.1 276 17-300 175-481 (795)
240 3nok_A Glutaminyl cyclase; bet 99.4 1.9E-10 6.5E-15 87.9 21.9 191 3-203 44-254 (268)
241 1kv9_A Type II quinohemoprotei 99.4 5E-10 1.7E-14 99.6 27.8 247 21-270 114-499 (668)
242 1mda_H Methylamine dehydrogena 99.4 6.2E-11 2.1E-15 96.9 20.2 255 3-279 57-365 (368)
243 2iwa_A Glutamine cyclotransfer 99.4 1.3E-09 4.6E-14 84.3 26.5 207 2-216 9-238 (266)
244 3nol_A Glutamine cyclotransfer 99.4 2.9E-10 9.9E-15 87.0 21.8 194 2-203 31-243 (262)
245 1npe_A Nidogen, entactin; glyc 99.4 6.2E-09 2.1E-13 81.9 30.1 243 25-280 2-260 (267)
246 2ad6_A Methanol dehydrogenase 99.4 9.8E-10 3.4E-14 95.7 27.4 271 23-300 61-495 (571)
247 2ad6_A Methanol dehydrogenase 99.4 1.6E-09 5.4E-14 94.4 28.5 244 21-270 112-505 (571)
248 3mbr_X Glutamine cyclotransfer 99.4 2.9E-09 9.8E-14 80.8 25.6 189 87-287 10-223 (243)
249 3mbr_X Glutamine cyclotransfer 99.3 2.8E-09 9.4E-14 80.9 24.7 194 2-203 9-223 (243)
250 1w6s_A Methanol dehydrogenase 99.3 5.1E-09 1.8E-13 91.3 29.1 273 23-300 61-504 (599)
251 3nok_A Glutaminyl cyclase; bet 99.3 1.8E-09 6.1E-14 82.6 23.0 189 87-287 44-254 (268)
252 4a2l_A BT_4663, two-component 99.3 1.6E-08 5.6E-13 92.1 33.8 274 17-300 133-437 (795)
253 2ece_A 462AA long hypothetical 99.3 3.6E-09 1.2E-13 87.2 25.7 219 23-247 94-399 (462)
254 2fp8_A Strictosidine synthase; 99.3 4.6E-09 1.6E-13 85.1 26.1 238 8-259 12-313 (322)
255 1npe_A Nidogen, entactin; glyc 99.3 2.2E-08 7.6E-13 78.7 29.3 213 16-235 37-259 (267)
256 1flg_A Protein (quinoprotein e 99.3 4.1E-09 1.4E-13 92.0 26.6 246 21-270 114-527 (582)
257 2ece_A 462AA long hypothetical 99.3 7E-09 2.4E-13 85.6 25.8 223 77-300 44-353 (462)
258 1w6s_A Methanol dehydrogenase 99.3 1.1E-08 3.7E-13 89.3 27.8 238 27-270 124-514 (599)
259 3v9f_A Two-component system se 99.2 2.4E-07 8.3E-12 84.3 36.4 278 15-300 211-525 (781)
260 2fp8_A Strictosidine synthase; 99.2 2E-08 6.9E-13 81.3 26.3 237 56-300 20-314 (322)
261 1flg_A Protein (quinoprotein e 99.2 1.4E-08 4.9E-13 88.6 26.4 272 24-300 68-517 (582)
262 3v9f_A Two-component system se 99.2 6.6E-07 2.3E-11 81.4 37.3 279 15-300 163-479 (781)
263 3v65_B Low-density lipoprotein 99.1 7.3E-07 2.5E-11 73.9 30.4 242 25-278 88-337 (386)
264 3v64_C Agrin; beta propeller, 99.1 1.3E-06 4.3E-11 71.4 30.6 250 17-278 36-294 (349)
265 2p4o_A Hypothetical protein; p 99.1 1.7E-06 5.7E-11 69.4 30.1 227 15-248 32-277 (306)
266 2p4o_A Hypothetical protein; p 99.0 3.4E-06 1.2E-10 67.6 28.9 221 55-289 32-278 (306)
267 1k3i_A Galactose oxidase precu 99.0 3.4E-07 1.2E-11 81.5 24.4 230 23-261 197-499 (656)
268 3sov_A LRP-6, low-density lipo 99.0 4.4E-06 1.5E-10 67.2 28.2 242 26-277 6-256 (318)
269 2xbg_A YCF48-like protein; pho 98.9 1.2E-05 4.2E-10 65.0 29.9 268 14-297 35-320 (327)
270 3v64_C Agrin; beta propeller, 98.9 6.2E-06 2.1E-10 67.3 27.5 213 16-235 74-295 (349)
271 1ijq_A LDL receptor, low-densi 98.9 1.4E-05 4.9E-10 64.2 32.8 230 26-268 3-247 (316)
272 3v65_B Low-density lipoprotein 98.9 3.3E-06 1.1E-10 70.0 25.2 213 16-235 117-338 (386)
273 3qqz_A Putative uncharacterize 98.9 1.1E-05 3.8E-10 62.1 26.8 202 50-257 22-251 (255)
274 2xe4_A Oligopeptidase B; hydro 98.9 2.8E-06 9.6E-11 76.8 26.3 192 56-257 175-398 (751)
275 3p5b_L Low density lipoprotein 98.9 2.4E-05 8.2E-10 65.1 30.2 215 14-235 111-340 (400)
276 1ijq_A LDL receptor, low-densi 98.9 1.8E-05 6.3E-10 63.6 28.4 203 15-224 30-247 (316)
277 3p5b_L Low density lipoprotein 98.8 2.7E-05 9.1E-10 64.8 32.3 241 26-278 85-339 (400)
278 3qqz_A Putative uncharacterize 98.8 1.1E-05 3.7E-10 62.2 25.2 194 95-296 24-250 (255)
279 3sov_A LRP-6, low-density lipo 98.8 2.2E-05 7.5E-10 63.1 27.0 212 16-234 36-257 (318)
280 3tc9_A Hypothetical hydrolase; 98.8 3.3E-05 1.1E-09 64.9 28.9 151 56-214 138-300 (430)
281 3amr_A 3-phytase; beta-propell 98.8 1.1E-05 3.7E-10 64.6 23.3 196 66-267 40-272 (355)
282 1k3i_A Galactose oxidase precu 98.7 2.1E-06 7.2E-11 76.5 20.6 236 59-300 190-498 (656)
283 2xbg_A YCF48-like protein; pho 98.7 3.3E-05 1.1E-09 62.4 25.2 230 14-256 79-319 (327)
284 4hw6_A Hypothetical protein, I 98.7 3.1E-05 1.1E-09 65.1 25.7 232 16-258 140-432 (433)
285 3m0c_C LDL receptor, low-densi 98.7 0.00017 5.8E-09 65.1 31.7 230 26-267 397-640 (791)
286 3tc9_A Hypothetical hydrolase; 98.7 0.0001 3.6E-09 61.9 28.1 151 16-175 138-301 (430)
287 4hw6_A Hypothetical protein, I 98.6 0.00017 5.8E-09 60.6 29.1 196 56-261 140-375 (433)
288 3m0c_C LDL receptor, low-densi 98.6 0.00023 7.7E-09 64.3 29.4 213 15-234 424-651 (791)
289 4a0p_A LRP6, LRP-6, low-densit 98.6 0.00035 1.2E-08 61.6 32.5 229 26-266 8-244 (628)
290 2xe4_A Oligopeptidase B; hydro 98.6 1.2E-05 4.1E-10 72.7 20.6 188 101-297 176-396 (751)
291 3amr_A 3-phytase; beta-propell 98.5 7.8E-05 2.7E-09 59.7 22.6 189 25-223 41-272 (355)
292 4a0p_A LRP6, LRP-6, low-densit 98.5 0.00044 1.5E-08 61.0 39.4 194 15-217 37-239 (628)
293 3ei3_A DNA damage-binding prot 98.5 0.00092 3.1E-08 63.1 35.1 293 15-321 514-892 (1158)
294 3s94_A LRP-6, low-density lipo 98.5 0.00057 2E-08 60.2 35.9 196 15-217 40-245 (619)
295 1n7d_A LDL receptor, low-densi 98.5 2.4E-06 8.1E-11 76.4 13.7 236 33-279 385-634 (699)
296 3s94_A LRP-6, low-density lipo 98.4 0.00045 1.5E-08 60.8 27.1 222 33-263 17-247 (619)
297 2vpj_A Kelch-like protein 12; 98.4 0.00024 8.3E-09 56.5 23.6 228 22-261 13-280 (301)
298 1n7d_A LDL receptor, low-densi 98.4 2E-06 6.8E-11 76.8 12.0 212 16-234 407-633 (699)
299 2ism_A Putative oxidoreductase 98.4 0.00052 1.8E-08 56.0 25.5 215 56-280 32-324 (352)
300 3kya_A Putative phosphatase; s 98.4 0.00071 2.4E-08 57.3 28.0 236 17-263 141-479 (496)
301 2p9w_A MAL S 1 allergenic prot 98.4 0.00045 1.5E-08 54.9 23.0 199 57-259 15-265 (334)
302 3kya_A Putative phosphatase; s 98.4 0.00074 2.5E-08 57.2 28.6 235 57-300 141-476 (496)
303 2xn4_A Kelch-like protein 2; s 98.4 0.00033 1.1E-08 55.8 22.7 227 22-261 14-278 (302)
304 2vpj_A Kelch-like protein 12; 98.4 0.00039 1.3E-08 55.3 22.9 226 65-300 14-279 (301)
305 3ott_A Two-component system se 98.4 0.0015 5.1E-08 59.3 31.7 271 14-298 62-351 (758)
306 2xn4_A Kelch-like protein 2; s 98.3 0.00076 2.6E-08 53.7 23.9 224 66-300 16-277 (302)
307 3ii7_A Kelch-like protein 7; p 98.3 0.00081 2.8E-08 53.6 24.7 225 24-261 12-274 (306)
308 3ei3_A DNA damage-binding prot 98.3 0.003 1E-07 59.7 37.0 277 14-300 553-914 (1158)
309 1zgk_A Kelch-like ECH-associat 98.2 0.00062 2.1E-08 54.4 21.6 226 23-261 24-289 (308)
310 2p9w_A MAL S 1 allergenic prot 98.2 0.00073 2.5E-08 53.7 21.0 169 7-176 5-216 (334)
311 3a9g_A Putative uncharacterize 98.2 0.0017 5.9E-08 52.9 25.1 218 55-280 29-321 (354)
312 3ii7_A Kelch-like protein 7; p 98.1 0.0017 5.9E-08 51.7 24.8 224 67-300 13-273 (306)
313 2be1_A Serine/threonine-protei 98.1 0.00019 6.4E-09 57.7 15.3 194 24-220 10-236 (339)
314 3ott_A Two-component system se 98.1 0.0056 1.9E-07 55.5 33.4 265 14-295 21-303 (758)
315 2ism_A Putative oxidoreductase 98.0 0.0033 1.1E-07 51.2 25.5 225 15-246 31-332 (352)
316 4asc_A Kelch repeat and BTB do 98.0 0.0023 7.7E-08 51.3 20.9 224 26-261 7-279 (315)
317 2xzh_A Clathrin heavy chain 1; 97.9 0.0047 1.6E-07 48.8 26.6 213 74-300 47-291 (365)
318 1zgk_A Kelch-like ECH-associat 97.9 0.0057 2E-07 48.7 25.8 233 65-311 24-296 (308)
319 1bpo_A Protein (clathrin); cla 97.8 0.011 3.8E-07 48.7 26.9 213 74-300 46-290 (494)
320 2be1_A Serine/threonine-protei 97.8 7.6E-05 2.6E-09 59.9 7.8 193 67-264 11-236 (339)
321 2woz_A Kelch repeat and BTB do 97.8 0.0099 3.4E-07 47.6 21.5 224 25-261 17-289 (318)
322 2g8s_A Glucose/sorbosone dehyd 97.8 0.011 3.8E-07 48.1 25.7 239 56-297 19-350 (353)
323 2xzh_A Clathrin heavy chain 1; 97.7 0.0096 3.3E-07 47.1 31.4 256 32-300 47-333 (365)
324 4asc_A Kelch repeat and BTB do 97.7 0.01 3.6E-07 47.4 24.1 220 68-300 7-278 (315)
325 1tl2_A L10, protein (tachylect 97.7 0.003 1E-07 46.9 14.5 107 101-211 43-159 (236)
326 3das_A Putative oxidoreductase 97.6 0.018 6E-07 46.6 27.3 220 54-280 31-317 (347)
327 3pbp_A Nucleoporin NUP82; beta 97.6 0.017 5.8E-07 47.6 19.1 147 22-171 30-208 (452)
328 2zwa_A Leucine carboxyl methyl 97.6 0.031 1.1E-06 50.0 22.8 196 22-218 396-638 (695)
329 2uvk_A YJHT; unknown function, 97.6 0.02 6.8E-07 46.6 23.4 234 21-265 17-348 (357)
330 1bpo_A Protein (clathrin); cla 97.5 0.028 9.6E-07 46.4 33.0 266 23-300 34-332 (494)
331 3sre_A PON1, serum paraoxonase 97.5 0.026 9.1E-07 45.7 23.2 193 56-257 51-296 (355)
332 3a9g_A Putative uncharacterize 97.5 0.027 9.4E-07 45.8 28.7 220 15-247 29-330 (354)
333 3pbp_A Nucleoporin NUP82; beta 97.5 0.011 3.9E-07 48.6 16.6 140 153-293 28-206 (452)
334 2woz_A Kelch repeat and BTB do 97.5 0.029 9.8E-07 44.9 24.0 221 68-300 18-288 (318)
335 2uvk_A YJHT; unknown function, 97.4 0.042 1.4E-06 44.7 21.1 227 65-300 19-343 (357)
336 1tl2_A L10, protein (tachylect 97.3 0.0088 3E-07 44.4 12.5 145 147-300 42-209 (236)
337 3das_A Putative oxidoreductase 97.2 0.06 2E-06 43.5 29.4 229 14-246 31-325 (347)
338 1cru_A Protein (soluble quinop 97.2 0.066 2.3E-06 45.2 18.8 107 55-164 27-162 (454)
339 1xi4_A Clathrin heavy chain; a 97.2 0.02 6.7E-07 54.5 16.2 214 74-301 46-291 (1630)
340 2g8s_A Glucose/sorbosone dehyd 97.0 0.094 3.2E-06 42.6 28.1 229 15-252 18-347 (353)
341 3sre_A PON1, serum paraoxonase 96.9 0.12 4.2E-06 41.8 28.5 162 32-202 81-283 (355)
342 1xi4_A Clathrin heavy chain; a 96.9 0.28 9.7E-06 47.0 20.8 257 32-300 46-332 (1630)
343 3qhy_B Beta-lactamase inhibito 96.9 0.11 3.9E-06 40.6 21.4 238 15-280 24-263 (282)
344 3qhy_B Beta-lactamase inhibito 96.8 0.12 4.1E-06 40.5 19.8 222 56-300 25-247 (282)
345 3sbq_A Nitrous-oxide reductase 96.4 0.39 1.3E-05 41.2 23.0 216 23-247 141-453 (638)
346 2zwa_A Leucine carboxyl methyl 95.9 0.56 1.9E-05 42.0 16.7 157 19-179 445-639 (695)
347 1cru_A Protein (soluble quinop 95.8 0.74 2.5E-05 38.8 28.3 103 15-118 27-163 (454)
348 3sbq_A Nitrous-oxide reductase 95.7 0.9 3.1E-05 39.0 23.1 223 27-259 73-408 (638)
349 3b7f_A Glycosyl hydrolase, BNR 93.4 2.8 9.5E-05 34.4 27.2 290 24-325 22-393 (394)
350 4gq2_M Nucleoporin NUP120; bet 91.8 8.3 0.00028 36.0 17.1 40 101-140 238-277 (950)
351 2wg3_C Hedgehog-interacting pr 91.8 5.3 0.00018 33.7 25.5 106 56-164 15-157 (463)
352 3uc1_A DNA gyrase subunit A; D 91.3 4.7 0.00016 32.2 23.5 227 24-258 3-278 (327)
353 2wg3_C Hedgehog-interacting pr 90.8 6.8 0.00023 33.1 28.0 104 15-119 14-159 (463)
354 3s25_A Hypothetical 7-bladed b 90.3 5.6 0.00019 31.3 24.7 173 18-215 58-255 (302)
355 4gq2_M Nucleoporin NUP120; bet 89.6 9.1 0.00031 35.8 14.1 38 228-267 237-274 (950)
356 3b7f_A Glycosyl hydrolase, BNR 87.9 10 0.00034 31.1 26.2 260 14-279 54-391 (394)
357 3uc1_A DNA gyrase subunit A; D 86.5 11 0.00038 30.1 20.2 156 14-174 94-278 (327)
358 4hvt_A Ritya.17583.B, post-pro 85.4 20 0.0007 32.2 25.7 229 19-258 136-429 (711)
359 3s25_A Hypothetical 7-bladed b 84.9 13 0.00043 29.3 26.0 207 64-300 23-256 (302)
360 3zwu_A Alkaline phosphatase PH 84.3 4.7 0.00016 35.2 8.5 60 57-117 478-549 (592)
361 3mvd_K Regulator of chromosome 83.0 19 0.00064 29.8 31.8 268 18-299 27-374 (423)
362 4fhn_B Nucleoporin NUP120; pro 80.0 11 0.00037 36.1 10.0 40 101-140 240-279 (1139)
363 3f7f_A Nucleoporin NUP120; nuc 79.7 2.4 8.1E-05 37.8 5.0 37 15-51 222-258 (729)
364 4a9v_A PHOX; hydrolase, beta-p 78.2 15 0.00052 31.8 9.3 63 55-118 476-550 (592)
365 1zi0_A DNA gyrase subunit A; b 74.9 29 0.00099 27.3 24.1 185 24-214 3-225 (307)
366 4fhn_B Nucleoporin NUP120; pro 74.4 14 0.00048 35.3 9.0 30 238-267 247-276 (1139)
367 3q6k_A 43.2 kDa salivary prote 71.3 41 0.0014 27.5 21.5 139 35-175 124-306 (381)
368 3l6v_A GYRA, DNA gyrase subuni 70.5 42 0.0014 27.3 25.3 186 23-214 6-264 (370)
369 1wp5_A Topoisomerase IV; broke 69.0 42 0.0014 26.7 25.0 187 23-215 4-225 (323)
370 1suu_A DNA gyrase subunit A; t 67.5 44 0.0015 26.4 24.5 228 64-299 6-283 (312)
371 3no0_A DNA gyrase subunit A; D 65.2 45 0.0016 25.7 23.4 193 55-258 24-245 (276)
372 3no0_A DNA gyrase subunit A; D 63.4 49 0.0017 25.5 20.7 194 15-214 24-245 (276)
373 3f7f_A Nucleoporin NUP120; nuc 63.0 15 0.00052 32.8 6.1 35 56-92 223-257 (729)
374 4a9v_A PHOX; hydrolase, beta-p 60.7 48 0.0016 28.9 8.5 57 146-202 476-548 (592)
375 1suu_A DNA gyrase subunit A; t 60.4 60 0.0021 25.5 25.7 187 23-215 7-231 (312)
376 3kci_A Probable E3 ubiquitin-p 59.5 70 0.0024 26.0 30.4 227 66-299 62-345 (389)
377 3zwu_A Alkaline phosphatase PH 53.6 60 0.0021 28.4 8.2 59 101-163 478-548 (592)
378 4hvt_A Ritya.17583.B, post-pro 50.0 1.5E+02 0.005 26.8 24.5 233 57-298 131-429 (711)
379 4gz8_A Semaphorin-3A; multi-do 46.0 92 0.0032 27.7 8.2 57 68-124 431-495 (667)
380 1zvt_A Topoisomerase IV subuni 45.4 98 0.0034 23.5 13.5 145 25-175 3-163 (256)
381 1wp5_A Topoisomerase IV; broke 44.5 1.2E+02 0.004 24.1 22.1 230 64-300 3-278 (323)
382 3hx6_A Type 4 fimbrial biogene 43.3 1.7E+02 0.0057 25.5 11.6 53 249-301 222-286 (570)
383 3q6k_A 43.2 kDa salivary prote 43.1 1.4E+02 0.0046 24.5 22.0 161 55-215 87-306 (381)
384 3al9_A Plexin-A2; beta-propell 42.1 80 0.0027 27.3 7.2 67 57-123 402-475 (539)
385 1q47_A Semaphorin 3A; beta pro 39.2 1E+02 0.0034 26.3 7.2 57 68-124 423-487 (495)
386 3mvd_K Regulator of chromosome 37.3 1.7E+02 0.0059 24.0 29.4 192 101-299 77-322 (423)
387 3nvq_A Semaphorin-7A; beta-pro 29.1 2E+02 0.0069 25.2 7.5 57 68-124 382-444 (590)
388 1zi0_A DNA gyrase subunit A; b 26.9 2.3E+02 0.0078 22.2 27.4 229 64-300 1-278 (307)
389 2zux_A YESW protein; beta-prop 26.8 3.2E+02 0.011 23.9 20.2 183 35-223 152-408 (591)
390 2zuy_A YESX protein; beta-prop 25.8 3.4E+02 0.012 23.8 18.3 183 35-224 156-413 (620)
391 3kci_A Probable E3 ubiquitin-p 23.8 2.9E+02 0.0099 22.3 31.1 234 16-259 54-345 (389)
392 3mez_B Mannose-specific lectin 23.7 1.5E+02 0.0051 18.9 7.7 24 149-173 59-82 (113)
393 1sqj_A OXG-RCBH, oligoxylogluc 21.5 4.6E+02 0.016 23.8 24.7 148 14-163 14-187 (789)
394 1q47_A Semaphorin 3A; beta pro 21.4 2.4E+02 0.0081 24.1 6.5 65 16-80 405-487 (495)
395 1sqj_A OXG-RCBH, oligoxylogluc 20.7 4.8E+02 0.016 23.7 26.1 148 54-205 14-190 (789)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-53 Score=359.08 Aligned_cols=282 Identities=18% Similarity=0.327 Sum_probs=261.6
Q ss_pred eeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (327)
Q Consensus 8 ~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~ 85 (327)
..+.+|.++|++++| ++++|++|+.||+|++||+.+++....+.+|...|++++|+|++++|++|+.|++|++||+.+
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 345689999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-
Q psy7482 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI- 164 (327)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 164 (327)
++.+..+ .+|... |.+++|+|++++|++++.|+.|++||++++.....+..+ ...+.++.++|++.++++++
T Consensus 182 ~~~~~~~-~~h~~~-V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h-----~~~v~~~~~~~~g~~l~s~s~ 254 (410)
T 1vyh_C 182 FECIRTM-HGHDHN-VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH-----REWVRMVRPNQDGTLIASCSN 254 (410)
T ss_dssp SCEEECC-CCCSSC-EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-----SSCEEEEEECTTSSEEEEEET
T ss_pred CceeEEE-cCCCCC-EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC-----CccEEEEEECCCCCEEEEEcC
Confidence 9998888 888888 999999999999999999999999999999876655432 34599999999999999987
Q ss_pred CCeEEEEEecCCceeeEec-CCCceeEEEeecC---------------------ceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482 165 QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE---------------------TTVCTGNEESAITAYNLTDGSHLWQI 222 (327)
Q Consensus 165 ~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~---------------------~~l~~~~~d~~i~i~d~~~~~~~~~~ 222 (327)
|+.|++||+++++....+. |...|.+++|+|+ .++++|+.|+.|++||+++++++..+
T Consensus 255 D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~ 334 (410)
T 1vyh_C 255 DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 (410)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 9999999999999888887 8899999999984 37999999999999999999999999
Q ss_pred eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482 223 KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELN 298 (327)
Q Consensus 223 ~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~ 298 (327)
.+|...|.+++|+ |++++|++|+.|+.|++||+.+++++..+.+|...|++++|+| .+|++|+.||.|++|+++
T Consensus 335 ~~h~~~v~~v~~~--~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 335 VGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp ECCSSCEEEEEEC--SSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred ECCCCcEEEEEEc--CCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 9999999999995 8999999999999999999999999999999999999999999 799999999999999863
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.4e-53 Score=343.45 Aligned_cols=281 Identities=14% Similarity=0.249 Sum_probs=256.9
Q ss_pred eeccCCccEEEEEe------CCCEEEEecCCCeEEEEEcccccc--ccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482 9 VTHSHTASVRSVAA------TSKLAASSGADETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (327)
Q Consensus 9 ~~~~h~~~v~~~~~------~~~~l~~~~~dg~v~~w~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 80 (327)
..++|.+.|.+++| ++.+|++|+.|++|++||+.+++. ...+.+|...|.+++|+|++.++++++.|++|++
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~l 106 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 106 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 34589999999999 256899999999999999977653 4568899999999999999999999999999999
Q ss_pred EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE
Q psy7482 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY 160 (327)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 160 (327)
||+.+++.+..+ ..+... +.+++|+|++++|++++.||.|++||+++++....+.... ..+.+++|+|++++|
T Consensus 107 Wd~~~~~~~~~~-~~~~~~-~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~-----~~v~~~~~spdg~~l 179 (321)
T 3ow8_A 107 WDLENGKQIKSI-DAGPVD-AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRG-----KFILSIAYSPDGKYL 179 (321)
T ss_dssp EETTTTEEEEEE-ECCTTC-CCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSS-----SCEEEEEECTTSSEE
T ss_pred EECCCCCEEEEE-eCCCcc-EEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCC-----ceEEEEEECCCCCEE
Confidence 999999998888 667766 9999999999999999999999999999988766554332 349999999999999
Q ss_pred Eeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEec
Q psy7482 161 AIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSI 237 (327)
Q Consensus 161 ~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s 237 (327)
++++ |+.|++||+++++.+..+. |..+|.+++|+|+ .+|++++.|+.|++||+++++.+..+.+|...|.+++|+
T Consensus 180 asg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s-- 257 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC-- 257 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC--
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC--
Confidence 9997 9999999999999999888 8889999999999 789999999999999999999999999999999999995
Q ss_pred CCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482 238 PQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELN 298 (327)
Q Consensus 238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~ 298 (327)
|++++|++++.|+.|++||+.+++++..+.+|...|.+++|+| .+|++++.||.|++||++
T Consensus 258 p~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 258 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999999999999999 899999999999999974
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.5e-51 Score=334.10 Aligned_cols=281 Identities=14% Similarity=0.259 Sum_probs=252.5
Q ss_pred EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482 6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (327)
Q Consensus 6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~ 83 (327)
....+++|.+.|.+++| ++++|++|+.||+|++||+.+++.+..+..|...|.+++|+|++++|++|+.|+.+++|++
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 34456799999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC----eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE
Q psy7482 84 GSW----QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL 159 (327)
Q Consensus 84 ~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 159 (327)
.+. +....+ .+|... |.++.|++++. +++++.|+.|++||+++++....+.. |...|.+++|+|++++
T Consensus 127 ~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~ 198 (340)
T 1got_B 127 KTREGNVRVSREL-AGHTGY-LSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTG-----HTGDVMSLSLAPDTRL 198 (340)
T ss_dssp TTCSBSCEEEEEE-ECCSSC-EEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEECTTSSE
T ss_pred ccCCCcceeEEEe-cCCCcc-EEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcC-----CCCceEEEEECCCCCE
Confidence 765 344555 778877 99999998774 88999999999999999887655432 3445999999999999
Q ss_pred EEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee--cccceEEEEE
Q psy7482 160 YAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA--SASRIKGLVF 234 (327)
Q Consensus 160 l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~ 234 (327)
+++++ |+.|++||+++++....+. |...|.+++|+|+ .++++++.|+.|++||+++++.+..+.. +...|.+++|
T Consensus 199 l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 278 (340)
T 1got_B 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278 (340)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEE
Confidence 99987 9999999999999988887 8889999999999 8899999999999999999888776653 2347999999
Q ss_pred EecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482 235 FSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWE 296 (327)
Q Consensus 235 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~ 296 (327)
+ |++++|++|+.|+.|++||+.+++.+..+.+|..+|.+++|+| .+|++|+.||.|++||
T Consensus 279 s--~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 279 S--KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp C--TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred C--CCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 4 9999999999999999999999999999999999999999999 7999999999999996
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.1e-51 Score=330.54 Aligned_cols=289 Identities=19% Similarity=0.253 Sum_probs=253.8
Q ss_pred CeeEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcE
Q psy7482 1 KYTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSI 78 (327)
Q Consensus 1 ~~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 78 (327)
++++.++|. +|.+.|.+++| ++++|++|+.||+|++||+.+++.+..+..|..+|.+++|+|++++|++|+.|+.|
T Consensus 2 ~l~~~~~~~--~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 2 KLDIKKTFS--NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp CCCCEEEEE--EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred cceeEEeec--CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 345566665 89999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CC
Q psy7482 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EG 157 (327)
Q Consensus 79 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 157 (327)
++||+.+++.+..+ .+|... |.+++|+|++++|++|+.||+|++||++++...... +. .|...|.+++|+| ++
T Consensus 80 ~vwd~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~-~~---~h~~~v~~v~~~p~~~ 153 (304)
T 2ynn_A 80 RVFNYNTGEKVVDF-EAHPDY-IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT-FE---GHEHFVMCVAFNPKDP 153 (304)
T ss_dssp EEEETTTCCEEEEE-ECCSSC-EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEE-EC---CCCSCEEEEEECTTCT
T ss_pred EEEECCCCcEEEEE-eCCCCc-EEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhh-hc---ccCCcEEEEEECCCCC
Confidence 99999999999988 889888 999999999999999999999999999877443221 22 2345699999999 56
Q ss_pred cEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeec--C-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEE
Q psy7482 158 LLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLN--E-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKG 231 (327)
Q Consensus 158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~--~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~ 231 (327)
.++++++ |+.|++||++++.....+. +...+..+.|+| + .++++++.|+.|++||+++++++.++.+|...|.+
T Consensus 154 ~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~ 233 (304)
T 2ynn_A 154 STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF 233 (304)
T ss_dssp TEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEE
Confidence 8888887 9999999998887766665 557899999987 4 68999999999999999999999999999999999
Q ss_pred EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---c-EEEEEecCCcEEEEEccCc
Q psy7482 232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---N-HLICITSAGDLVVWELNED 300 (327)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~-~l~~~~~dg~v~iw~~~~~ 300 (327)
++|+ |++.+|++|+.||.|++||+.+++.+..+..|...+++++|+| . ++++|+. ..+.+|++...
T Consensus 234 ~~~~--p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~-~g~~~~~~~~~ 303 (304)
T 2ynn_A 234 AVFH--PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFD-NGFTVLSLGND 303 (304)
T ss_dssp EEEC--SSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEET-TEEEEEECC--
T ss_pred EEEC--CCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecC-CceEEEEeccC
Confidence 9995 8999999999999999999999999999999999999999988 2 5777664 45778877654
No 5
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.7e-49 Score=323.04 Aligned_cols=285 Identities=19% Similarity=0.290 Sum_probs=256.1
Q ss_pred EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482 6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (327)
Q Consensus 6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~ 83 (327)
..+.+.+|.+.|++++| ++++|++|+.||.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 34556699999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482 84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP 163 (327)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 163 (327)
++++.+..+ ..|... |.+++|+|++++|++++.||.|++||+++++....+..+ ..++.+++|+|++++++++
T Consensus 95 ~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~ 167 (312)
T 4ery_A 95 SSGKCLKTL-KGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-----SDPVSAVHFNRDGSLIVSS 167 (312)
T ss_dssp TTCCEEEEE-ECCSSC-EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC-----SSCEEEEEECTTSSEEEEE
T ss_pred CCCcEEEEE-cCCCCC-EEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC-----CCcEEEEEEcCCCCEEEEE
Confidence 999999888 788887 999999999999999999999999999988876555332 3459999999999999988
Q ss_pred c-CCeEEEEEecCCceeeEec--CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEE--EEEEec
Q psy7482 164 I-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKG--LVFFSI 237 (327)
Q Consensus 164 ~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~s 237 (327)
+ |+.|++||+++++.+..+. +..++..++|+|+ .++++++.|+.|++||+++++.+..+.+|...... ..+. .
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~ 246 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS-V 246 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE-C
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE-e
Confidence 7 9999999999998887775 5678999999999 88999999999999999999999999888765433 2343 2
Q ss_pred CCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEe--cCCcEEEEEcc
Q psy7482 238 PQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICIT--SAGDLVVWELN 298 (327)
Q Consensus 238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~--~dg~v~iw~~~ 298 (327)
+++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| +++++++ .|+.|++|+.+
T Consensus 247 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 247 TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 7889999999999999999999999999999999999999999 8888887 69999999975
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.8e-49 Score=327.98 Aligned_cols=281 Identities=16% Similarity=0.213 Sum_probs=250.5
Q ss_pred eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC
Q psy7482 7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (327)
Q Consensus 7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 84 (327)
...+.||.+.|++++| ++++|++|+.||+|++||..+++....+..|...|.+++|+|++.+|++|+.|+.+++|++.
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence 3455699999999999 89999999999999999999998888888899999999999999999999999999999986
Q ss_pred CC------eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc--C
Q psy7482 85 SW------QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP--E 156 (327)
Q Consensus 85 ~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~ 156 (327)
.. .....+ ..|... |.++.|+|++..|++++.|++|++||+++++....+..+ ...+.+++|+| +
T Consensus 137 ~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h-----~~~v~~~~~~~~~~ 209 (354)
T 2pbi_B 137 FDKNENMAAKKKSV-AMHTNY-LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH-----GADVLCLDLAPSET 209 (354)
T ss_dssp CCTTCCSGGGCEEE-EECSSC-EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-----SSCEEEEEECCCSS
T ss_pred ccccccccccceee-eccCCc-EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC-----CCCeEEEEEEeCCC
Confidence 43 233445 678777 999999999999999999999999999999876665433 34499999987 4
Q ss_pred CcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeec--ccceEE
Q psy7482 157 GLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKAS--ASRIKG 231 (327)
Q Consensus 157 ~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~ 231 (327)
++++++++ |+.|++||+++++.+..+. |...|.+++|+|+ .++++++.|+.|++||++.++.+..+..+ ...+.+
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~ 289 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASS 289 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeE
Confidence 67888887 9999999999999998887 8899999999998 89999999999999999988877666543 346889
Q ss_pred EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482 232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWE 296 (327)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~ 296 (327)
++|+ |++++|++|+.|+.|++||+.+++.+..+.+|...|++++|+| ++|++|+.||.|++|+
T Consensus 290 ~~~s--~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 290 VDFS--LSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEC--TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEe--CCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9994 9999999999999999999999999999999999999999999 8999999999999996
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.3e-49 Score=351.57 Aligned_cols=312 Identities=14% Similarity=0.218 Sum_probs=260.0
Q ss_pred eeccCCccEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482 9 VTHSHTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (327)
Q Consensus 9 ~~~~h~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~ 85 (327)
.+.+|...|.+++| ++. .|++|+.|++|++||..+++....+.+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~ 221 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 221 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 34689999999999 555 699999999999999999998899999999999999999999999999999999999999
Q ss_pred CeEEEeEEe------cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc--------------------
Q psy7482 86 WQLEKLFKK------AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS-------------------- 139 (327)
Q Consensus 86 ~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------------------- 139 (327)
++....+.. +|.+. |.+++|+|++++|++++.|++|++||+++++....+...
T Consensus 222 g~~~~~~~~~~~~~~~h~~~-V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 300 (611)
T 1nr0_A 222 GTKTGVFEDDSLKNVAHSGS-VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI 300 (611)
T ss_dssp CCEEEECBCTTSSSCSSSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEE
T ss_pred CcEeeeeccccccccccCCC-EEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEE
Confidence 988877732 67777 999999999999999999999999999988765544321
Q ss_pred ------------------ccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe------------------
Q psy7482 140 ------------------SYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL------------------ 182 (327)
Q Consensus 140 ------------------~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~------------------ 182 (327)
....|...|.+++|+|++++|++++ |+.|++||+.+++....+
T Consensus 301 s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 380 (611)
T 1nr0_A 301 SANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD 380 (611)
T ss_dssp ETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC
T ss_pred eCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCc
Confidence 1124566799999999999999997 999999998765432211
Q ss_pred -----------------------------------------------------------------cCCCceeEEEeecC-
Q psy7482 183 -----------------------------------------------------------------KSESKVHSVCFLNE- 196 (327)
Q Consensus 183 -----------------------------------------------------------------~~~~~i~~~~~~~~- 196 (327)
.+...+.+++|+|+
T Consensus 381 l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg 460 (611)
T 1nr0_A 381 LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDK 460 (611)
T ss_dssp EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTS
T ss_pred EEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCC
Confidence 11234678999999
Q ss_pred ceEEEeCCCCcEEEEEcCCCce--eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC-CceeEE--eecccC
Q psy7482 197 TTVCTGNEESAITAYNLTDGSH--LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD-GSHLWH--IKASAS 271 (327)
Q Consensus 197 ~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~-~~~~~~--~~~~~~ 271 (327)
.++++|+.|+.|++||+..+.. +.. .+|...|++++| +|+|++|++++.|+.|++||+.+ ++.+.. +..|..
T Consensus 461 ~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~f--spdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~ 537 (611)
T 1nr0_A 461 QFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAF--SNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTA 537 (611)
T ss_dssp CEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEE--CTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSS
T ss_pred CEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEE--CCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeeccc
Confidence 7899999999999999987643 233 679999999999 49999999999999999999987 555443 345999
Q ss_pred ceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCC-CCceEEEEeCCCC
Q psy7482 272 RIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATND-GCRFTCLAIRPPV 326 (327)
Q Consensus 272 ~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~i~~l~~~p~~ 326 (327)
.|.+++|+| ++|++++.|++|++|++..+. .........| ...|++++|+|+.
T Consensus 538 ~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~--~~~~~~~~~h~~~~v~~v~fs~d~ 593 (611)
T 1nr0_A 538 KVACVSWSPDNVRLATGSLDNSVIVWNMNKPS--DHPIIIKGAHAMSSVNSVIWLNET 593 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCTT--SCCEEETTSSTTSCEEEEEEEETT
T ss_pred ceeEEEECCCCCEEEEEECCCcEEEEECCCcc--cccchhhccCcccCeeEEEEcCCC
Confidence 999999999 899999999999999998762 1221223346 6789999999974
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.8e-50 Score=336.17 Aligned_cols=289 Identities=14% Similarity=0.251 Sum_probs=253.4
Q ss_pred eeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (327)
Q Consensus 8 ~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~ 85 (327)
..+.||.+.|++++| ++++|++|+.||+|++||+.+++....+..|...|.+++|+|++++|++|+.|+.+++||+.+
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~ 139 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSS 139 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCC
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCC
Confidence 345699999999999 899999999999999999999999999999999999999999999999999999999999865
Q ss_pred Ce-------EEEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-C
Q psy7482 86 WQ-------LEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-E 156 (327)
Q Consensus 86 ~~-------~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 156 (327)
.. ....+ .+|.+. |.++.|.|+ +..|++|+.|++|++||+++++....+.......|...+.+++|+| +
T Consensus 140 ~~~~~~~~~~~~~~-~gh~~~-v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 140 QADRDGNMPVSRVL-TGHKGY-ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp CSSCCCSSTTCCBC-CCCSSC-CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred CccccCCccceeec-cCCCcc-eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC
Confidence 32 22344 678877 999999996 4579999999999999999998876664444445567799999987 7
Q ss_pred CcEEEeec-CCeEEEEEec-CCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeeccc-----
Q psy7482 157 GLLYAIPI-QNKAVVFSVE-KAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASAS----- 227 (327)
Q Consensus 157 ~~~l~~~~-~~~i~i~d~~-~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----- 227 (327)
+.++++|+ |+.|++||++ .++.+..+. |...|.+++|+|+ .++++++.|++|++||+++++.+..+..+..
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~ 297 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNE 297 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCS
T ss_pred CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccc
Confidence 88888887 9999999998 456667776 8899999999999 7899999999999999999988877755432
Q ss_pred --ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEe----ecccCceEEEeeeC--cEEEEEecCCcEEEEEccC
Q psy7482 228 --RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHI----KASASRIKGLASHR--NHLICITSAGDLVVWELNE 299 (327)
Q Consensus 228 --~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~ 299 (327)
.+.+++|+ |+|++|++|+.||.|++||+..++.+..+ .+|.+.|.+++|+| .+|++|+.||.|++|++..
T Consensus 298 ~~~v~~~~~s--~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 298 LPIVTSVAFS--ISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SCSCSEEEEC--SSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred cCceEEEEEC--CCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 48899994 99999999999999999999999888777 68999999999999 8999999999999999987
Q ss_pred c
Q psy7482 300 D 300 (327)
Q Consensus 300 ~ 300 (327)
.
T Consensus 376 ~ 376 (380)
T 3iz6_a 376 H 376 (380)
T ss_dssp S
T ss_pred C
Confidence 5
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3e-49 Score=324.50 Aligned_cols=280 Identities=14% Similarity=0.168 Sum_probs=232.5
Q ss_pred ccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc-----------ccccccccccccEEEEEECCCCCeEEEecCCCc
Q psy7482 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR-----------KQSGALMQHEGTITCLKFTPEGSHLISCSDDGS 77 (327)
Q Consensus 11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (327)
..|...|.+++| ||++|++++ |+++++||.... ........+...|.+++|+|++ .|++|+.||+
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 357888999999 899999887 778888874311 1111222366789999999985 6889999999
Q ss_pred EEEEEcCCCeEEEeE---EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEc
Q psy7482 78 IAIFRVGSWQLEKLF---KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWS 154 (327)
Q Consensus 78 i~iw~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 154 (327)
|++||+++++....+ ..+|.+. |.+++|+|++++|++|+.||.|++||+++++.+..+.. |...|.+++|+
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~-V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-----h~~~V~~~~~~ 178 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDI-VSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-----HAAQVTCVAAS 178 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEEC
T ss_pred EEEEeccCCCceeEeeccccCCCCC-EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-----cCCceEEEEec
Confidence 999999988755433 2467777 99999999999999999999999999999987665533 34569999999
Q ss_pred cCCc-EEEeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeeccc
Q psy7482 155 PEGL-LYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASAS 227 (327)
Q Consensus 155 ~~~~-~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 227 (327)
|++. ++++++ |+.|++||+++++....+. +...+.+++|+|+ .++++|+.||.|++||+++++++.++.+|..
T Consensus 179 ~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~ 258 (344)
T 4gqb_B 179 PHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ 258 (344)
T ss_dssp SSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS
T ss_pred CCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC
Confidence 9884 677776 9999999999999888775 4567999999996 5788999999999999999999999999999
Q ss_pred ceEEEEEEecCCC-cEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCcc
Q psy7482 228 RIKGLVFFSIPQE-TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNEDV 301 (327)
Q Consensus 228 ~v~~~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~ 301 (327)
.|++++|+ |++ ++|++|+.|+.|++||+.+++.+ .+.+|.+.|++++|+| .+|++++.||+|++|++....
T Consensus 259 ~v~~v~fs--p~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 259 CVTGLVFS--PHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CEEEEEEC--SSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CEEEEEEc--cCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 99999995 887 57999999999999999888754 5789999999999998 578899999999999998773
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.3e-48 Score=314.86 Aligned_cols=283 Identities=16% Similarity=0.240 Sum_probs=243.6
Q ss_pred EeeeeccCCccEEEEEe---CCCEEEEecCCCeEEEEEcccc-----ccccccccccccEEEEEECCCCCeEEEecCCCc
Q psy7482 6 QTFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR-----KQSGALMQHEGTITCLKFTPEGSHLISCSDDGS 77 (327)
Q Consensus 6 ~~~~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (327)
..-.+.||.+.|.+++| ++++|++|+.|++|++|++... .++..+.+|...|.+++|+|++++|++|+.|++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 33455699999999999 3479999999999999998643 456778899999999999999999999999999
Q ss_pred EEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG 157 (327)
Q Consensus 78 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (327)
|++||+.+++....+ .+|... |.+++|+|++.+|++++.|+.|++||++. +....+. .|...+.++.|.|..
T Consensus 89 v~~wd~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~-----~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 89 LRLWDVATGETYQRF-VGHKSD-VMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLL-----GHNDWVSQVRVVPNE 160 (319)
T ss_dssp EEEEETTTTEEEEEE-ECCSSC-EEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEEC-----CCSSCEEEEEECCC-
T ss_pred EEEEECCCCCeeEEE-ccCCCc-EEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEe-----ccCCcEEEEEEccCC
Confidence 999999999999988 888888 99999999999999999999999999964 3333222 234559999999854
Q ss_pred ------cEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccc
Q psy7482 158 ------LLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASR 228 (327)
Q Consensus 158 ------~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 228 (327)
..+++++ |+.|++||+++.+....+. |...|.+++|+|+ .+|++++.||.|++||+.+++.+..+..+ .+
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~ 239 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DE 239 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SC
T ss_pred CCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-Cc
Confidence 4677776 9999999999998888776 8899999999999 78999999999999999999998888754 57
Q ss_pred eEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee--------cccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482 229 IKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK--------ASASRIKGLASHR--NHLICITSAGDLVVWELN 298 (327)
Q Consensus 229 v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~ 298 (327)
+.+++|+ |++.++++++.+ .+++|++..+..+..+. .|...+.+++|+| ++|++|+.||.|++||+.
T Consensus 240 v~~~~~s--p~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 240 VFSLAFS--PNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EEEEEEC--SSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEEEc--CCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 9999995 899999988754 59999998877766654 3456789999999 899999999999999997
Q ss_pred Cc
Q psy7482 299 ED 300 (327)
Q Consensus 299 ~~ 300 (327)
+.
T Consensus 317 t~ 318 (319)
T 3frx_A 317 TA 318 (319)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-48 Score=320.17 Aligned_cols=290 Identities=17% Similarity=0.270 Sum_probs=238.9
Q ss_pred eEEEeeeeccCCc-cEEEEEe--CCCEEEEecCCCeEEEEEccccccc---cccccccccEEEEEECCCCCeEEEecCCC
Q psy7482 3 TLTQTFVTHSHTA-SVRSVAA--TSKLAASSGADETVVLYDMVKRKQS---GALMQHEGTITCLKFTPEGSHLISCSDDG 76 (327)
Q Consensus 3 ~~~~~~~~~~h~~-~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 76 (327)
++.+. +.+|.+ .|.+++| ++++||+|+.|++|+|||+.+++.. ....+|...|.+++|+|++++|++|+.|+
T Consensus 6 ~~~~~--~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 6 VLLGR--VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp EEEEE--ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEeee--ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 34444 448988 9999999 8999999999999999999877533 22367999999999999999999999999
Q ss_pred cEEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEc
Q psy7482 77 SIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWS 154 (327)
Q Consensus 77 ~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 154 (327)
.+++|++..+. ....+ .+|... |.+++|+|++++|++++.|+.|++||++++........ ...|...|.+++|+
T Consensus 84 ~v~iw~~~~~~~~~~~~~-~~h~~~-v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTL-EGHENE-VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV--LNSHTQDVKHVVWH 159 (345)
T ss_dssp CEEEEEECCC-EEEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE--ECCCCSCEEEEEEC
T ss_pred cEEEEEccCCCeEEEEEc-cCCCCC-ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE--ecCcCCCeEEEEEC
Confidence 99999998764 45566 778887 99999999999999999999999999987654322211 12234569999999
Q ss_pred cCCcEEEeec-CCeEEEEEecCCce--eeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC-------------
Q psy7482 155 PEGLLYAIPI-QNKAVVFSVEKAGV--LQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG------------- 216 (327)
Q Consensus 155 ~~~~~l~~~~-~~~i~i~d~~~~~~--~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~------------- 216 (327)
|++++|++++ |+.|++||.+.++. ...+. |...|.+++|+|+ .+|++++.|+.|++||....
T Consensus 160 p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 160 PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---C
T ss_pred CCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCC
Confidence 9999999987 99999999988753 34555 8899999999999 78999999999999996432
Q ss_pred --ceeEEeee-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc----e-----eEEeecccCceEEEeeeC---c
Q psy7482 217 --SHLWQIKA-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS----H-----LWHIKASASRIKGLASHR---N 281 (327)
Q Consensus 217 --~~~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~----~-----~~~~~~~~~~v~~~~~~~---~ 281 (327)
+.+..+.+ |...|.+++|+ |++..|++++.|+.|++|+...+. + .....+|...|++++|+| .
T Consensus 240 ~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 317 (345)
T 3fm0_A 240 SWKCICTLSGFHSRTIYDIAWC--QLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPG 317 (345)
T ss_dssp EEEEEEEECSSCSSCEEEEEEC--TTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTT
T ss_pred ccceeEEecCCCCCcEEEEEEe--cCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCce
Confidence 22334444 88899999995 899999999999999999987543 1 123457999999999999 4
Q ss_pred EEEEEecCCcEEEEEccCc
Q psy7482 282 HLICITSAGDLVVWELNED 300 (327)
Q Consensus 282 ~l~~~~~dg~v~iw~~~~~ 300 (327)
+|++++.||.|++|++...
T Consensus 318 ~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 318 LLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EEEEEETTSCEEEEEECC-
T ss_pred EEEEcCCCCcEEEEEecCC
Confidence 8999999999999999887
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-48 Score=326.00 Aligned_cols=278 Identities=18% Similarity=0.327 Sum_probs=246.1
Q ss_pred cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccc------------------cEEEEEECCCCCeEEE
Q psy7482 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEG------------------TITCLKFTPEGSHLIS 71 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~ 71 (327)
+|.+.|.+++| +|++||+|+ ++.+++|++.+++.+..+..|.. .|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 69999999999 899999987 78999999999988777665432 4999999999999999
Q ss_pred ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEE
Q psy7482 72 CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSV 151 (327)
Q Consensus 72 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 151 (327)
|+.|+.|++||+.+++....+ .+|... |.+++|+|++++|++++.|+.|++||+++++....+.... .+.++
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~-~~h~~~-v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~------~v~~~ 212 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMIL-QGHEQD-IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED------GVTTV 212 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS------CEEEE
T ss_pred EcCCCeEEEEECCCCcEEEEE-ccCCCC-EEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCC------CcEEE
Confidence 999999999999999998888 888888 9999999999999999999999999999988766655433 39999
Q ss_pred EEcc-CCcEEEeec-CCeEEEEEecCCceeeEe--------cCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC----
Q psy7482 152 VWSP-EGLLYAIPI-QNKAVVFSVEKAGVLQTL--------KSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG---- 216 (327)
Q Consensus 152 ~~~~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~--------~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~---- 216 (327)
+|+| +++++++++ |+.|++||+++++.+..+ .|...|.+++|+|+ .++++++.|+.|++||+++.
T Consensus 213 ~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~ 292 (393)
T 1erj_A 213 AVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKS 292 (393)
T ss_dssp EECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 9999 889999987 999999999998887766 26788999999999 78999999999999999763
Q ss_pred --------ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--------
Q psy7482 217 --------SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR-------- 280 (327)
Q Consensus 217 --------~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-------- 280 (327)
.....+.+|...|.++++. |++.+|++|+.|+.|++||+.+++++..+.+|...|.+++|++
T Consensus 293 ~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~ 370 (393)
T 1erj_A 293 DSKTPNSGTCEVTYIGHKDFVLSVATT--QNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY 370 (393)
T ss_dssp --------CEEEEEECCSSCEEEEEEC--GGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTC
T ss_pred cccCCCCCcceEEEecccCcEEEEEEC--CCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCC
Confidence 3455678899999999994 8999999999999999999999999999999999999999875
Q ss_pred cEEEEEecCCcEEEEEccCc
Q psy7482 281 NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 281 ~~l~~~~~dg~v~iw~~~~~ 300 (327)
++|++|+.||.|++|++...
T Consensus 371 ~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 371 NVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEEEEEETTSEEEEEEEEEC
T ss_pred CEEEEECCCCcEEECccccc
Confidence 68999999999999998764
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.3e-48 Score=319.39 Aligned_cols=286 Identities=19% Similarity=0.289 Sum_probs=237.5
Q ss_pred EEeeeeccCCccEEEEEe--------CCCEEEEecCCCeEEEEEcccc-------ccccccccccccEEEEEECCCCCeE
Q psy7482 5 TQTFVTHSHTASVRSVAA--------TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTPEGSHL 69 (327)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~--------~~~~l~~~~~dg~v~~w~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l 69 (327)
.....++||.+.|++++| ++++|++|+.|++|++||+.+. .+...+.+|...|.+++|+|++.+|
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 344456699999999988 7789999999999999998753 3456788999999999999999999
Q ss_pred EEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482 70 ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLD 149 (327)
Q Consensus 70 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 149 (327)
++|+.|++|++||+++++....+ .+|... |.+++|+|++++|++++.|+.|++||+..... .. ......+...+.
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~-~~h~~~-v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~-~~--~~~~~~~~~~v~ 166 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRF-VGHQSE-VYSVAFSPDNRQILSAGAEREIKLWNILGECK-FS--SAEKENHSDWVS 166 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEE-ECCCSC-EEEEEECSSTTEEEEEETTSCEEEEESSSCEE-EE--CCTTTSCSSCEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEE-cCCCCc-EEEEEECCCCCEEEEEcCCCEEEEEeccCCce-ee--eecccCCCceee
Confidence 99999999999999999999888 888888 99999999999999999999999999974322 11 222223456699
Q ss_pred EEEEccCC----------cEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC
Q psy7482 150 SVVWSPEG----------LLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG 216 (327)
Q Consensus 150 ~~~~~~~~----------~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~ 216 (327)
+++|+|++ .++++++ |+.|++||. ..+....+. |...|.+++|+|+ .+|++|+.|+.|++||+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCC
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999986 6788777 999999994 455555665 8899999999999 78999999999999999543
Q ss_pred -ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE--Eee-----------cccCceEEEeeeC--
Q psy7482 217 -SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW--HIK-----------ASASRIKGLASHR-- 280 (327)
Q Consensus 217 -~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~-----------~~~~~v~~~~~~~-- 280 (327)
.....+ .+...|.+++|+ |++.+++++ .|+.|++||+.+++... .+. +|...|.+++|+|
T Consensus 246 ~~~~~~~-~~~~~v~~v~~s--p~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 321 (343)
T 2xzm_R 246 TYPQREF-DAGSTINQIAFN--PKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALG 321 (343)
T ss_dssp SSCSEEE-ECSSCEEEEEEC--SSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSS
T ss_pred cccceee-cCCCcEEEEEEC--CCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCC
Confidence 344443 355679999995 888887755 57889999998776433 443 6778899999999
Q ss_pred cEEEEEecCCcEEEEEccCc
Q psy7482 281 NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 281 ~~l~~~~~dg~v~iw~~~~~ 300 (327)
++|++|+.||.|++|++.++
T Consensus 322 ~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 322 KKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CCEEEEETTSEEEEEEEEEE
T ss_pred CeEEEecCCceEEEEEEEcc
Confidence 89999999999999999765
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.7e-49 Score=325.74 Aligned_cols=280 Identities=14% Similarity=0.224 Sum_probs=230.4
Q ss_pred ccCCccEEEEEe--CCCEEEEecC------CCeEEEEEccccccccc----cccccccEEEEEECCCCCeEEEecCCCcE
Q psy7482 11 HSHTASVRSVAA--TSKLAASSGA------DETVVLYDMVKRKQSGA----LMQHEGTITCLKFTPEGSHLISCSDDGSI 78 (327)
Q Consensus 11 ~~h~~~v~~~~~--~~~~l~~~~~------dg~v~~w~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 78 (327)
.+|...|.+++| ||++||+|+. |+.|++|+..++.+... ..+|...|++++|+|++. +++++.||+|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence 479999999999 9999999997 78899999887765443 346889999999999985 5567889999
Q ss_pred EEEEcCCCeEEEeE---EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482 79 AIFRVGSWQLEKLF---KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP 155 (327)
Q Consensus 79 ~iw~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 155 (327)
++||+.+++..... ..+|... |.+++|+|++++|++++.||.|++||+++++....+.. |...|.+++|+|
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~-V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~-----h~~~v~~v~~s~ 191 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDI-VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA-----HSSEVNCVAACP 191 (357)
T ss_dssp EEC--------CCCCEEECCCSSC-EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEECT
T ss_pred EEeeccccceeEEEeeccCCCCCC-EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-----CCCCEEEEEEcc
Confidence 99999887654322 1366776 99999999999999999999999999999887666543 244599999999
Q ss_pred CCc-EEEeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecccc
Q psy7482 156 EGL-LYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASASR 228 (327)
Q Consensus 156 ~~~-~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 228 (327)
++. ++++++ |+.|++||+++++....+. +...+.+++|+|+ .++++|+.|+.|++||+++++.+..+.+|...
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~ 271 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN 271 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC
T ss_pred CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecccee
Confidence 875 566665 9999999999988776654 5678999999997 57889999999999999999999999999999
Q ss_pred eEEEEEEecCCC-cEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCc
Q psy7482 229 IKGLVFFSIPQE-TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 229 v~~~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~ 300 (327)
|++++|+ |++ ++|++|+.|+.|+|||+++++.+..+ +|.+.|++++|+| .+|++++.||+|++|++...
T Consensus 272 v~~l~~s--p~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 272 ITGLAYS--YHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEEEEC--SSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEEEEc--CCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999995 776 68999999999999999998877655 7999999999998 79999999999999999776
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.1e-47 Score=309.26 Aligned_cols=270 Identities=13% Similarity=0.197 Sum_probs=236.0
Q ss_pred ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482 45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (327)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 124 (327)
+...++.+|.+.|++++|+|++++|++++.||.|++||+.+++.+..+ ..|... |.+++|+|++++|++|+.|+.|++
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSI-QVTETP-VRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-ECCSSC-EEEEEEEGGGTEEEEEETTSEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEe-eccCCc-EEEEEEeCCCCEEEEECCCCEEEE
Confidence 345678899999999999999999999999999999999999998888 777777 999999999999999999999999
Q ss_pred EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCc-eeeEec-CCCceeEEEeec-C-ceE
Q psy7482 125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAG-VLQTLK-SESKVHSVCFLN-E-TTV 199 (327)
Q Consensus 125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~-~~~~~~-~~~~i~~~~~~~-~-~~l 199 (327)
||+++++.+..+..+ ...|.+++|+|+++++++++ |+.|++||++++. ....+. |...|.+++|+| + ..+
T Consensus 82 wd~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAH-----PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp EETTTCCEEEEEECC-----SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE
T ss_pred EECCCCcEEEEEeCC-----CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEE
Confidence 999999876655433 44599999999999999987 9999999998874 445555 889999999999 4 689
Q ss_pred EEeCCCCcEEEEEcCCCceeEEee-ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482 200 CTGNEESAITAYNLTDGSHLWQIK-ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS 278 (327)
Q Consensus 200 ~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 278 (327)
++|+.|+.|++||+++......+. .|...+..+.+.+.+++.+|++++.|+.|++||+++++++..+.+|...|.+++|
T Consensus 157 ~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~ 236 (304)
T 2ynn_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236 (304)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEE
Confidence 999999999999998887766654 4667899999976568899999999999999999999999999999999999999
Q ss_pred eC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482 279 HR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 279 ~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~ 325 (327)
+| ++|++++.||.|++||+.+.. .... ...+...+.+++|+|+
T Consensus 237 ~p~~~~l~s~s~Dg~i~iWd~~~~~--~~~~--~~~~~~~~~~~~~~~~ 281 (304)
T 2ynn_A 237 HPTLPIIISGSEDGTLKIWNSSTYK--VEKT--LNVGLERSWCIATHPT 281 (304)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTCC--EEEE--ECCSSSSEEEEEECTT
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCc--eeee--ccCCCccEEEEEECCC
Confidence 99 899999999999999998872 2222 2345678999999986
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-47 Score=312.82 Aligned_cols=288 Identities=15% Similarity=0.253 Sum_probs=228.5
Q ss_pred eEEEeeeeccCCccEEEEEeCCCEEEEecCCCeEEEEEcccc--cccccc-cc-ccccEEEEEECCCCCeEEEecCCCcE
Q psy7482 3 TLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKR--KQSGAL-MQ-HEGTITCLKFTPEGSHLISCSDDGSI 78 (327)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~d~~i 78 (327)
++.+.+ ++|.++|.+++|++.+||+|+.|++|++||+..+ +....+ .+ |...|.+++|+|++++|++|+.|++|
T Consensus 5 ~~~~~~--~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 5 NLIKSL--KLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEE--ECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccceee--ccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 444544 4999999999996669999999999999999875 344444 34 99999999999999999999999999
Q ss_pred EEEEcCC-------CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-cee-eeeeccccCccccceE
Q psy7482 79 AIFRVGS-------WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSA-YITNLSSYGVGFENLD 149 (327)
Q Consensus 79 ~iw~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~-~~~~~~~~~~~~~~v~ 149 (327)
++||+.. .+....+ .+|... |.+++|+|++++|++++.|+.|++||++.. ... ....+. .|...|.
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~-~~h~~~-V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~---~h~~~v~ 157 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAII-EGHENE-VKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ---EHSQDVK 157 (330)
T ss_dssp EEEEC-------CCCEEEEEE-C----C-EEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC---CCSSCEE
T ss_pred EEEEcccCcCccccceeEEEE-cCCCCc-EEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec---cCCCceE
Confidence 9999853 3455566 788887 999999999999999999999999999543 211 111122 2345699
Q ss_pred EEEEccCCcEEEeec-CCeEEEEEecCC--ceeeEec-CCCceeEEEeecC---ceEEEeCCCCcEEEEEcCCC------
Q psy7482 150 SVVWSPEGLLYAIPI-QNKAVVFSVEKA--GVLQTLK-SESKVHSVCFLNE---TTVCTGNEESAITAYNLTDG------ 216 (327)
Q Consensus 150 ~~~~~~~~~~l~~~~-~~~i~i~d~~~~--~~~~~~~-~~~~i~~~~~~~~---~~l~~~~~d~~i~i~d~~~~------ 216 (327)
+++|+|++.+|++++ |+.|++||..++ +.+..+. |...|.+++|+|+ .++++++.|++|++||++.+
T Consensus 158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 999999999999998 999999999876 5666776 8899999999997 36899999999999998754
Q ss_pred --ceeEEeee-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc--eeE-EeecccC-ceEEEeeeC----cEEEE
Q psy7482 217 --SHLWQIKA-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS--HLW-HIKASAS-RIKGLASHR----NHLIC 285 (327)
Q Consensus 217 --~~~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~--~~~-~~~~~~~-~v~~~~~~~----~~l~~ 285 (327)
.....+.. |...|.+++|. + +.+|++++.||.|++||..+++ ... ...+|.. .|.+++|+| ++|++
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s--~-~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las 314 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWG--F-NGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILAT 314 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEEC--T-TSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEE
T ss_pred eeEEeeecccccccceEEEEEc--C-CCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEE
Confidence 23444544 88999999994 4 4589999999999999998874 333 3357876 899999987 58999
Q ss_pred EecCCcEEEEEccCc
Q psy7482 286 ITSAGDLVVWELNED 300 (327)
Q Consensus 286 ~~~dg~v~iw~~~~~ 300 (327)
|+.||.|++|+++..
T Consensus 315 ~s~Dg~v~~W~~~~~ 329 (330)
T 2hes_X 315 GGDDGIVNFWSLEKA 329 (330)
T ss_dssp EETTSEEEEEEC---
T ss_pred ecCCCcEEEEEeccC
Confidence 999999999998753
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-46 Score=332.62 Aligned_cols=309 Identities=17% Similarity=0.211 Sum_probs=259.2
Q ss_pred eeEEEeeee--ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCc
Q psy7482 2 YTLTQTFVT--HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS 77 (327)
Q Consensus 2 ~~~~~~~~~--~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (327)
+++...+.. ..+.+.+.+++| +|++||+++ ++.|++|++.+++....+.+|...|++++|+|+|++||+|+.|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~ 82 (611)
T 1nr0_A 4 FSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGN 82 (611)
T ss_dssp CEEEEEECCCCCCCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred cccccEECCCCCcccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCC
Confidence 355555542 346778888889 899999987 679999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCC----CCEEEEEcCCCceeeeeeccccCccccceEEE
Q psy7482 78 IAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVKGRSAYITNLSSYGVGFENLDSV 151 (327)
Q Consensus 78 i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 151 (327)
|++||+.+++ ....+ ..|.+. |.+++|+|+++.|++++.+ +.|++||. ++.... ...|...|.++
T Consensus 83 v~lWd~~~~~~~~~~~~-~~~~~~-v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~-----l~gh~~~v~~v 153 (611)
T 1nr0_A 83 VRIWDTTQTTHILKTTI-PVFSGP-VKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGN-----LTGQARAMNSV 153 (611)
T ss_dssp EEEEESSSTTCCEEEEE-ECSSSC-EEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBC-----CCCCSSCEEEE
T ss_pred EEEeECCCCcceeeEee-cccCCc-eEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcce-----ecCCCCCceEE
Confidence 9999997543 34455 677777 9999999999999998865 46888874 443322 23345679999
Q ss_pred EEccCCc-EEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee----
Q psy7482 152 VWSPEGL-LYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK---- 223 (327)
Q Consensus 152 ~~~~~~~-~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~---- 223 (327)
+|+|++. .|++++ |+.|++||..+++....+. |...|.+++|+|+ .+|++++.|+.|++||+.+++.+..+.
T Consensus 154 ~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~ 233 (611)
T 1nr0_A 154 DFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL 233 (611)
T ss_dssp EECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccc
Confidence 9999986 577776 9999999999988888887 8899999999999 789999999999999999998888874
Q ss_pred ---ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE------------------------------------
Q psy7482 224 ---ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW------------------------------------ 264 (327)
Q Consensus 224 ---~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~------------------------------------ 264 (327)
+|...|.+++|+ |++++|++++.|+.|++||+.+++.+.
T Consensus 234 ~~~~h~~~V~~v~~s--pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~ 311 (611)
T 1nr0_A 234 KNVAHSGSVFGLTWS--PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 311 (611)
T ss_dssp SSCSSSSCEEEEEEC--TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEET
T ss_pred cccccCCCEEEEEEC--CCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeC
Confidence 799999999994 999999999999999999998876543
Q ss_pred -------EeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482 265 -------HIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 265 -------~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~ 325 (327)
.+.+|...|++++|+| ++|++++.||.|++||+..+ .........|...|.+++|+|+
T Consensus 312 ~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~---~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 312 ELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG---ISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---CEEECSSCSCSSCEEEEEECTT
T ss_pred CCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC---ceeeecccCCcceEEEEEECCC
Confidence 3357888999999999 89999999999999999887 2322222457788999999875
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.5e-46 Score=328.22 Aligned_cols=307 Identities=22% Similarity=0.372 Sum_probs=262.2
Q ss_pred EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482 6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (327)
Q Consensus 6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~ 83 (327)
+..+++||.+.|++++| ||++||+|+.|++|+|||. +++++..+.+|...|++++|+|++++|++++.|++|++||.
T Consensus 8 e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~ 86 (577)
T 2ymu_A 8 ERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 86 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 44567899999999999 9999999999999999995 78888999999999999999999999999999999999996
Q ss_pred CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeee---------c----------------
Q psy7482 84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN---------L---------------- 138 (327)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---------~---------------- 138 (327)
+++.+..+ .+|... |.+++|+|++++|++++.|+.+++|+........... .
T Consensus 87 -~~~~~~~~-~~~~~~-v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 163 (577)
T 2ymu_A 87 -NGQLLQTL-TGHSSS-VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 163 (577)
T ss_dssp -TSCEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred -CCCEEEEE-ECCCCC-EEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccce
Confidence 56778888 788887 9999999999999999999999999975432111000 0
Q ss_pred ----------cccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCC
Q psy7482 139 ----------SSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEE 205 (327)
Q Consensus 139 ----------~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d 205 (327)
.....+...+.++.++|+++++++++ |+.|++||. +++.+..+. |...|.+++|+|+ .++++++.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d 242 (577)
T 2ymu_A 164 KLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 242 (577)
T ss_dssp EEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred eccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCC
Confidence 00012335588999999999998887 999999996 456666666 8899999999999 789999999
Q ss_pred CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEE
Q psy7482 206 SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHL 283 (327)
Q Consensus 206 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l 283 (327)
+.|++||. +++.+..+.+|...|.+++|. |+++.+++++.|+.|++||. +++.+..+.+|...|.+++|+| +.|
T Consensus 243 ~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~--~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l 318 (577)
T 2ymu_A 243 KTVKLWNR-NGQLLQTLTGHSSSVNGVAFR--PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTI 318 (577)
T ss_dssp SCEEEECT-TSCEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CEEEEEeC-CCCEEEEEecCCCCEEEEEEc--CCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEE
Confidence 99999996 567888899999999999995 99999999999999999995 5678888999999999999999 899
Q ss_pred EEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 284 ICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 284 ~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
++++.||.|++|++... .. .....+...+.+++|+|+.
T Consensus 319 ~t~~~d~~i~~w~~~~~---~~--~~~~~~~~~v~~~~~s~~g 356 (577)
T 2ymu_A 319 ASASDDKTVKLWNRNGQ---HL--QTLTGHSSSVWGVAFSPDG 356 (577)
T ss_dssp EEEETTSCEEEEETTSC---EE--EEECCCSSCEEEEEECTTS
T ss_pred EEEeCCCeEEEEeCCCC---ee--EEEeCCCCCEEEEEECCCC
Confidence 99999999999998765 22 2334567789999999973
No 19
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-46 Score=316.53 Aligned_cols=267 Identities=18% Similarity=0.286 Sum_probs=240.9
Q ss_pred ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482 47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (327)
Q Consensus 47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 126 (327)
...+.+|..+|++++|+|++.+|++|+.||+|++||+.+++....+ .+|... |.+++|+|++++|++|+.||.|++||
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l-~~h~~~-V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL-KGHTDS-VQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE-CCCSSC-EEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEE-eccCCc-EEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 4567789999999999999999999999999999999999999888 888888 99999999999999999999999999
Q ss_pred cCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeC
Q psy7482 127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGN 203 (327)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~ 203 (327)
+.+++.+..+. .|...|.+++|+|++.++++++ |+.|++||+++++.+..+. |...+.++.++|+ .++++++
T Consensus 179 ~~~~~~~~~~~-----~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 179 FQGFECIRTMH-----GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp TTSSCEEECCC-----CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCceeEEEc-----CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEc
Confidence 99887655443 2345599999999999999887 9999999999999988887 8889999999998 7899999
Q ss_pred CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCC--------------------CcEEEEecCCCeEEEEEcCCCcee
Q psy7482 204 EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQ--------------------ETTVCTGNEESAITAYNLTDGSHL 263 (327)
Q Consensus 204 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~--------------------~~~l~~~~~d~~i~i~d~~~~~~~ 263 (327)
.|+.|++||+++++....+.+|...|.+++|. |+ +.+|++|+.|+.|++||+.+++++
T Consensus 254 ~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 254 NDQTVRVWVVATKECKAELREHRHVVECISWA--PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEEC--CSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCeEEEEECCCCceeeEecCCCceEEEEEEc--CcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 99999999999999999999999999999996 54 678999999999999999999999
Q ss_pred EEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 264 WHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 264 ~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
..+.+|...|++++|+| ++|++++.||.|++||+..+. ....+ ..|...|++++|+|+.
T Consensus 332 ~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~--~~~~~--~~h~~~v~~l~~~~~~ 392 (410)
T 1vyh_C 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR--CMKTL--NAHEHFVTSLDFHKTA 392 (410)
T ss_dssp EEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC--CCEEE--ECCSSCEEEEEECSSS
T ss_pred EEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--eEEEE--cCCCCcEEEEEEcCCC
Confidence 99999999999999999 899999999999999998772 23333 3577789999999973
No 20
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.3e-46 Score=302.99 Aligned_cols=268 Identities=16% Similarity=0.252 Sum_probs=235.5
Q ss_pred cccccccccccEEEEEECCC----CCeEEEecCCCcEEEEEcCCCeEE--EeEEecccCCceeeEEEecCCCEEEEEeCC
Q psy7482 46 QSGALMQHEGTITCLKFTPE----GSHLISCSDDGSIAIFRVGSWQLE--KLFKKAHKGTAVNHISIHPSGKLALSVGKD 119 (327)
Q Consensus 46 ~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 119 (327)
....+.+|.+.|.+++|+|+ +.+|++|+.|++|++|++..++.. ..+ .+|... |.+++|++++.++++++.|
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l-~gh~~~-v~~~~~~~~~~~l~s~s~D 101 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL-EGHQLG-VVSVDISHTLPIAASSSLD 101 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSC-EEEEEECSSSSEEEEEETT
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeee-ccCCCC-EEEEEECCCCCEEEEEeCC
Confidence 34456789999999999984 568999999999999999877643 345 778887 9999999999999999999
Q ss_pred CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-
Q psy7482 120 KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE- 196 (327)
Q Consensus 120 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~- 196 (327)
+.|++||+++++.+..+.... ..+.+++|+|+++++++++ ++.+++||+++++....+. +...+.+++|+|+
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~-----~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg 176 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGP-----VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG 176 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCT-----TCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS
T ss_pred CcEEEEECCCCCEEEEEeCCC-----ccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC
Confidence 999999999998776654433 3488999999999999997 9999999999999888877 7788999999999
Q ss_pred ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEE
Q psy7482 197 TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGL 276 (327)
Q Consensus 197 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~ 276 (327)
.++++++.|+.|++||+++++.+..+.+|..+|.+++|+ |++++|++++.|+.|++||+++++.+..+.+|...|.++
T Consensus 177 ~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s--pd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~ 254 (321)
T 3ow8_A 177 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS--PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV 254 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEEC--TTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEc--CCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEE
Confidence 889999999999999999999999999999999999995 999999999999999999999999999999999999999
Q ss_pred eeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 277 ASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 277 ~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
+|+| .+|++++.||.|++||+.++. .......|...|.+++|+|+.
T Consensus 255 ~~sp~~~~l~s~s~D~~v~iwd~~~~~----~~~~~~~h~~~v~~v~~s~~g 302 (321)
T 3ow8_A 255 AFCPDDTHFVSSSSDKSVKVWDVGTRT----CVHTFFDHQDQVWGVKYNGNG 302 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTS
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCE----EEEEEcCCCCcEEEEEECCCC
Confidence 9999 899999999999999998872 122234577889999999973
No 21
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.2e-46 Score=314.74 Aligned_cols=290 Identities=13% Similarity=0.151 Sum_probs=253.0
Q ss_pred EeeeeccCCccEEEEEeCCCEEEEecCCCeEEEEEccccc------cccccccccccEEEEEECCC----C---CeEEEe
Q psy7482 6 QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRK------QSGALMQHEGTITCLKFTPE----G---SHLISC 72 (327)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~l~~~ 72 (327)
....+.+|.+.|++++|+.++|++|+.||.|++||+.+++ ....+.+|...|++++|+|+ + ++|+++
T Consensus 8 ~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp EEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 3345569999999999977999999999999999999887 67888899999999999999 9 999999
Q ss_pred cCCCcEEEEEcCCCeE-----EEeEEecc-----cCCceeeEEEe----cCCCE-EEEEeCCCCEEEEEcCC------Cc
Q psy7482 73 SDDGSIAIFRVGSWQL-----EKLFKKAH-----KGTAVNHISIH----PSGKL-ALSVGKDKTLRTWNLVK------GR 131 (327)
Q Consensus 73 ~~d~~i~iw~~~~~~~-----~~~~~~~~-----~~~~v~~~~~~----~~~~~-l~~~~~dg~i~iwd~~~------~~ 131 (327)
+.||.|++||+.+++. ...+ ..| ... |.+++|+ |++++ |++++.||.|++||+++ ++
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~-v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKL-DLLDSDMKKHS-FWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEE-CCSCTTGGGSC-EEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred cCCCCEEEEEccCCcccccccceee-cccccccCCCc-EEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 9999999999988775 6666 666 355 9999999 99999 99999999999999988 55
Q ss_pred eee-----eeec--cccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecC-------CCceeEEEeecC
Q psy7482 132 SAY-----ITNL--SSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKS-------ESKVHSVCFLNE 196 (327)
Q Consensus 132 ~~~-----~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~-------~~~i~~~~~~~~ 196 (327)
... .+.. .....+...+.+++|+|++ ++++++ ++.|++||+++++.+..+.. ...+.+++|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~ 244 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 244 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence 544 3321 0001234559999999999 888887 89999999999998888874 889999999998
Q ss_pred -ceEEEeCCC---CcEEEEEcCCCceeEEeee-------------cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482 197 -TTVCTGNEE---SAITAYNLTDGSHLWQIKA-------------SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD 259 (327)
Q Consensus 197 -~~l~~~~~d---~~i~i~d~~~~~~~~~~~~-------------~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~ 259 (327)
.++++++.| +.|++||+++++.+..+.. |...|.+++|+ |++++|++++.|+.|++||+.+
T Consensus 245 ~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 245 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN--DSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEEC--SSSSEEEEEETTSEEEEEETTT
T ss_pred CCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEEC--CCCCEEEEEeCCCeEEEEEcCC
Confidence 889999999 9999999999999999988 99999999995 8999999999999999999999
Q ss_pred CceeEEee------cc---------------cCceEEEeeeC-c-----------EEEEEecCCcEEEEEccCc
Q psy7482 260 GSHLWHIK------AS---------------ASRIKGLASHR-N-----------HLICITSAGDLVVWELNED 300 (327)
Q Consensus 260 ~~~~~~~~------~~---------------~~~v~~~~~~~-~-----------~l~~~~~dg~v~iw~~~~~ 300 (327)
++.+..+. +| ...|++++|+| . +|++++.||.|++|++.++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 323 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 99999999 88 89999999999 3 8999999999999999875
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.4e-45 Score=322.98 Aligned_cols=298 Identities=22% Similarity=0.388 Sum_probs=258.9
Q ss_pred eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (327)
Q Consensus 9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~ 86 (327)
.+.+|...|.+++| ++++|++++.|+.|++||. +++....+.+|...|.+++|+|+++.|++++.|+.|++||....
T Consensus 257 ~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~ 335 (577)
T 2ymu_A 257 TLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ 335 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC
T ss_pred EEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 34589999999999 8999999999999999996 56777888899999999999999999999999999999998654
Q ss_pred eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C
Q psy7482 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q 165 (327)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~ 165 (327)
....+ ..|... +.+++|+|++++|++++.||.+++||. +++....+.. +...|.+++|+|+++++++++ |
T Consensus 336 -~~~~~-~~~~~~-v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~-----~~~~v~~~~~s~dg~~l~~~~~d 406 (577)
T 2ymu_A 336 -HLQTL-TGHSSS-VWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-----HSSSVRGVAFSPDGQTIASASDD 406 (577)
T ss_dssp -EEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEEC-----CSSCEEEEEECTTSSCEEEEETT
T ss_pred -eeEEE-eCCCCC-EEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecC-----CCCCeEEEEECCCCCEEEEEeCC
Confidence 44555 677777 999999999999999999999999995 4555444332 234599999999999999987 9
Q ss_pred CeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE
Q psy7482 166 NKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV 243 (327)
Q Consensus 166 ~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l 243 (327)
+.|++||. +++.+..+. |...|.+++|+|+ .++++++.|+.|++||. +++.+..+.+|...|.+++| +|++++|
T Consensus 407 ~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~--spd~~~l 482 (577)
T 2ymu_A 407 KTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAF--SPDGQTI 482 (577)
T ss_dssp SEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEE--CTTSCEE
T ss_pred CEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEE--cCCCCEE
Confidence 99999995 466666666 8899999999998 88999999999999996 56788889999999999999 4999999
Q ss_pred EEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEE
Q psy7482 244 CTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLA 321 (327)
Q Consensus 244 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~ 321 (327)
++++.|+.|++||. +++++..+.+|...|++++|+| ++|++++.||.|++||.... ... ....|...|++++
T Consensus 483 as~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~---~~~--~~~~h~~~v~~~~ 556 (577)
T 2ymu_A 483 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---LLQ--TLTGHSSSVWGVA 556 (577)
T ss_dssp EEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC---EEE--EEECCSSCEEEEE
T ss_pred EEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCC---EEE--EEcCCCCCEEEEE
Confidence 99999999999994 7889999999999999999999 89999999999999997433 222 2345788999999
Q ss_pred eCCCC
Q psy7482 322 IRPPV 326 (327)
Q Consensus 322 ~~p~~ 326 (327)
|+|+.
T Consensus 557 fs~dg 561 (577)
T 2ymu_A 557 FSPDG 561 (577)
T ss_dssp ECTTS
T ss_pred EcCCC
Confidence 99973
No 23
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-45 Score=307.43 Aligned_cols=291 Identities=13% Similarity=0.164 Sum_probs=258.7
Q ss_pred EEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482 4 LTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF 81 (327)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 81 (327)
..+.+.+.+|.+.|++++| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++|
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW 101 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 3566778899999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCCCceeeeeecccc------Cccc--cce
Q psy7482 82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAYITNLSSY------GVGF--ENL 148 (327)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~------~~~~--~~v 148 (327)
|+.+++....+ . +... +.+++|+|+++++++++.+ |.|++||+..+........... ..+. ..+
T Consensus 102 d~~~~~~~~~~-~-~~~~-v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 102 DVSNGQCVATW-K-SPVP-VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp ETTTCCEEEEE-E-CSSC-EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred ECCCCcEEEEe-e-cCCC-eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 99999998888 3 5555 9999999999999999998 9999999987654322211110 0111 259
Q ss_pred EEEEEccCCcEEEeec-CCeEEEEEecC-CceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee
Q psy7482 149 DSVVWSPEGLLYAIPI-QNKAVVFSVEK-AGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA 224 (327)
Q Consensus 149 ~~~~~~~~~~~l~~~~-~~~i~i~d~~~-~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 224 (327)
.+++|+|+++++++++ ++.|++||+++ ++.+..+. +...|.+++|+|+ .+|++++.|+.|++||+++++.+..+.
T Consensus 179 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~- 257 (369)
T 3zwl_B 179 TVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE- 257 (369)
T ss_dssp EEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred eEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-
Confidence 9999999999999887 89999999998 67777777 8899999999999 789999999999999999999888887
Q ss_pred cccceEEEEEEecCCCcEEEEecCCC--------------eEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEec
Q psy7482 225 SASRIKGLVFFSIPQETTVCTGNEES--------------AITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITS 288 (327)
Q Consensus 225 ~~~~v~~~~~~~s~~~~~l~~~~~d~--------------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~ 288 (327)
+...+..++|. |+++++++++.++ .+++||..+++.+..+.+|...|.+++|+| ++|++++.
T Consensus 258 ~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 335 (369)
T 3zwl_B 258 TDCPLNTAVIT--PLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGE 335 (369)
T ss_dssp CSSCEEEEEEC--SSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCceeEEec--CCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcC
Confidence 77789999994 9999999999888 899999999999999999999999999999 89999999
Q ss_pred CCcEEEEEccCc
Q psy7482 289 AGDLVVWELNED 300 (327)
Q Consensus 289 dg~v~iw~~~~~ 300 (327)
||.|++|+++.+
T Consensus 336 dg~v~iw~~~~~ 347 (369)
T 3zwl_B 336 DGFIRLHHFEKS 347 (369)
T ss_dssp TSEEEEEEECHH
T ss_pred CCeEEEEECccc
Confidence 999999999876
No 24
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-46 Score=314.75 Aligned_cols=316 Identities=11% Similarity=0.160 Sum_probs=262.6
Q ss_pred EEeeeeccCCccEEEEEe--CCC-EEEEecCCCeEEEEEc----cccc------ccccccc----------ccccEEEEE
Q psy7482 5 TQTFVTHSHTASVRSVAA--TSK-LAASSGADETVVLYDM----VKRK------QSGALMQ----------HEGTITCLK 61 (327)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~----~~~~------~~~~~~~----------~~~~v~~~~ 61 (327)
.+.+..+.|.+.|.+++| +++ +||+|+.||.|++||+ .+++ ....+.. |...|++++
T Consensus 36 ~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 36 VKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp CEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred hhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence 345565678899999999 788 9999999999999999 8777 3444433 678999999
Q ss_pred ECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc
Q psy7482 62 FTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY 141 (327)
Q Consensus 62 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 141 (327)
|+|++++|++++.||.|++|| .+++....+ ..|... |.+++|+|++++|++++.||.|++||+++++....+.....
T Consensus 116 ~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 192 (425)
T 1r5m_A 116 WSHDGNSIVTGVENGELRLWN-KTGALLNVL-NFHRAP-IVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKET 192 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEE-TTSCEEEEE-CCCCSC-EEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--
T ss_pred EcCCCCEEEEEeCCCeEEEEe-CCCCeeeec-cCCCcc-EEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecccc
Confidence 999999999999999999999 667777777 778777 99999999999999999999999999999887666544332
Q ss_pred Cc----------cccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEE
Q psy7482 142 GV----------GFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAIT 209 (327)
Q Consensus 142 ~~----------~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~ 209 (327)
.. ....+.+++|+|++.+++.+.++.|++||+++++.+..+. +...+.+++|+|+ .++++++.|+.|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 272 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLR 272 (425)
T ss_dssp -------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred CccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 10 0111788999999876666669999999999998888887 8899999999998 7999999999999
Q ss_pred EEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEe
Q psy7482 210 AYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICIT 287 (327)
Q Consensus 210 i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~ 287 (327)
+||+++++.+..+..|...+.+++|+ |++ ++++++.|+.|++||+.+++.+..+..|...|.+++|+| ++|++++
T Consensus 273 i~d~~~~~~~~~~~~~~~~i~~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 273 IWHGGNGNSQNCFYGHSQSIVSASWV--GDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp EECSSSBSCSEEECCCSSCEEEEEEE--TTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCccceEecCCCccEEEEEEC--CCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE
Confidence 99999999999999999999999996 788 999999999999999999999999999999999999999 8999999
Q ss_pred cCCcEEEEEccCccCC---------------Cceeeee-cCCCC--ceEEEEeCCCC
Q psy7482 288 SAGDLVVWELNEDVTR---------------EPQRVSA-TNDGC--RFTCLAIRPPV 326 (327)
Q Consensus 288 ~dg~v~iw~~~~~~~~---------------~~~~~~~-~~~~~--~i~~l~~~p~~ 326 (327)
.||.|++|++...... ....+.. ..+.. .|++++|+|+.
T Consensus 350 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 406 (425)
T 1r5m_A 350 MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAG 406 (425)
T ss_dssp TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTS
T ss_pred CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCC
Confidence 9999999999876200 0002222 22433 89999999973
No 25
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.9e-45 Score=299.68 Aligned_cols=282 Identities=17% Similarity=0.278 Sum_probs=239.8
Q ss_pred eeccCCccEEEEEe--C-CCEEEEecCCCeEEEEEccccc-----cccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482 9 VTHSHTASVRSVAA--T-SKLAASSGADETVVLYDMVKRK-----QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (327)
Q Consensus 9 ~~~~h~~~v~~~~~--~-~~~l~~~~~dg~v~~w~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 80 (327)
.++||.+.|++|+| + +++||||+.|++|+|||+.+.+ +...+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 35699999999999 3 6899999999999999987654 45677899999999999999999999999999999
Q ss_pred EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC--c
Q psy7482 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG--L 158 (327)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~ 158 (327)
|+.......... ..+... +....+++++.+|++++.|+.+++||+....... .... .+...+..++|++++ .
T Consensus 113 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~-~~~~---~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 113 WDLTTGTTTRRF-VGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-VQDE---SHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp EETTTTEEEEEE-ECCSSC-EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-ECSS---SCSSCEEEEEECSCSSSC
T ss_pred Eeecccceeeee-cCCCCc-eeEEEEeecCccceeecCCCeEEEEEeCCCceEE-EEec---cccCcccceEEccCCCCc
Confidence 999988887777 666666 8899999999999999999999999987654432 2222 234558999998865 4
Q ss_pred EEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482 159 LYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF 235 (327)
Q Consensus 159 ~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 235 (327)
++++++ |+.|++||+++++.+..+. |...|.+++|+|+ .+|++|+.|+.|++||+++.+.+..+..+ ..+..+.|.
T Consensus 187 ~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~ 265 (340)
T 4aow_A 187 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFS 265 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEEC
T ss_pred EEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecC
Confidence 566665 9999999999999988887 8899999999999 88999999999999999999998888755 569999994
Q ss_pred ecCCCcEEEEecCCCeEEEEEcCCCceeEEee---------cccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIK---------ASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---------~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
|++. +++++.|+.|++||++++..+..+. +|...|++++|+| ++|++|+.||.|+|||+.++
T Consensus 266 --~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 266 --PNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp --SSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred --CCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 6655 5566679999999999887666554 5788999999999 89999999999999999987
No 26
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.8e-45 Score=294.90 Aligned_cols=276 Identities=16% Similarity=0.204 Sum_probs=243.1
Q ss_pred eeccCCccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC-
Q psy7482 9 VTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW- 86 (327)
Q Consensus 9 ~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~- 86 (327)
.+.+|.+.|.+++| ++++|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++++.||.|++|++...
T Consensus 13 ~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 92 (313)
T 3odt_A 13 TLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATS 92 (313)
T ss_dssp EECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCT
T ss_pred HhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecC
Confidence 44599999999999 9999999999999999999999988899999999999999999999999999999999998654
Q ss_pred --eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCcEEEee
Q psy7482 87 --QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIP 163 (327)
Q Consensus 87 --~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~ 163 (327)
+....+ ..|... |.++.| +++++++++.||.|++|| .++.......+ ...+.++.|.| ++..++++
T Consensus 93 ~~~~~~~~-~~~~~~-i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 93 GEDPLYTL-IGHQGN-VCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAH-----NASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp TSCC-CEE-CCCSSC-EEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECC-----SSCEEEEEEEETTTTEEEEE
T ss_pred CCCcccch-hhcccC-EEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccC-----CCceeEEEEccCCCCEEEEE
Confidence 455566 677777 999999 477999999999999999 44444443332 34599999988 88888888
Q ss_pred c-CCeEEEEEecCCceeeEec--CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCC
Q psy7482 164 I-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE 240 (327)
Q Consensus 164 ~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~ 240 (327)
+ ++.+++|| ..+....+. +...+.+++|+|++.+++++.|+.|++||+++++.+..+..|..++.+++|+ |++
T Consensus 162 ~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~--~~~ 237 (313)
T 3odt_A 162 SADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLL--PNG 237 (313)
T ss_dssp ETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC--TTS
T ss_pred ECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEe--cCC
Confidence 7 99999999 445555555 7889999999999779999999999999999999999999999999999995 788
Q ss_pred cEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482 241 TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR-NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 241 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~ 300 (327)
.|++++.||.|++||+.+++++..+..|...|.+++|+| ..+++++.||.|++|++..+
T Consensus 238 -~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 238 -DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp -CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred -CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence 689999999999999999999999999999999999999 55788999999999999987
No 27
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3e-44 Score=295.00 Aligned_cols=280 Identities=14% Similarity=0.221 Sum_probs=245.4
Q ss_pred eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc-----cccccEEEEEECCCCCeEEEecCCCcEE
Q psy7482 7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-----QHEGTITCLKFTPEGSHLISCSDDGSIA 79 (327)
Q Consensus 7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 79 (327)
.+...+|...|.+++| ++++|++++ ||.|++||+.+++....+. .|...|.+++|+|++++|++++.|+.|+
T Consensus 44 ~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 122 (337)
T 1gxr_A 44 QINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS 122 (337)
T ss_dssp EEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEE
T ss_pred cceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 3444579999999999 889999999 9999999998876443332 6899999999999999999999999999
Q ss_pred EEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482 80 IFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG 157 (327)
Q Consensus 80 iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (327)
+||+.+++ ....+ ..|... |.+++|+|+++++++++.||.|++||+++++....+.. +...+.+++|+|++
T Consensus 123 ~~d~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~ 195 (337)
T 1gxr_A 123 IWDLAAPTPRIKAEL-TSSAPA-CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-----HTDGASCIDISNDG 195 (337)
T ss_dssp EEECCCC--EEEEEE-ECSSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEECTTS
T ss_pred EEECCCCCcceeeec-ccCCCc-eEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec-----ccCceEEEEECCCC
Confidence 99999877 44445 566666 99999999999999999999999999998877665543 23459999999999
Q ss_pred cEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482 158 LLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF 235 (327)
Q Consensus 158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 235 (327)
+++++++ |+.|++||+++++.+..+.+...+.+++|+|+ .++++++.++.|++||+++++. ..+..|..++.+++|+
T Consensus 196 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~ 274 (337)
T 1gxr_A 196 TKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFA 274 (337)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEEC
T ss_pred CEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEEC
Confidence 9999887 99999999999999999999999999999999 7899999999999999988765 4677899999999995
Q ss_pred ecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482 236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELN 298 (327)
Q Consensus 236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~ 298 (327)
|++++|++++.||.|++||+.+++.+... .|...+.+++|+| ++|++++.||.|++|++.
T Consensus 275 --~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 275 --YCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp --TTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred --CCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 99999999999999999999999887554 4788999999999 899999999999999974
No 28
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=8.7e-45 Score=298.58 Aligned_cols=273 Identities=15% Similarity=0.224 Sum_probs=235.3
Q ss_pred ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482 45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (327)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 124 (327)
+....+.+|.+.|++++|+|++++|++|+.||.|++||+.+++....+ ..|... |.+++|+|++++|++++.|+.+++
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAI-PLRSSW-VMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE-ECSSSC-EEEEEECTTSSEEEEEETTCEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEe-ecCCcc-EEEEEECCCCCEEEEEeCCCeEEE
Confidence 445678899999999999999999999999999999999999988888 778777 999999999999999999999999
Q ss_pred EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEe
Q psy7482 125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTG 202 (327)
Q Consensus 125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~ 202 (327)
||+.+++..... ......|...+.++.|++++.+++++.|+.|++||+++++.+..+. |...|.+++|+|+ .++++|
T Consensus 124 w~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 124 YNLKTREGNVRV-SRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp EETTTCSBSCEE-EEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECccCCCccee-EEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 999875422111 1111233456999999999886655569999999999999998887 8899999999999 789999
Q ss_pred CCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec--ccCceEEEeeeC
Q psy7482 203 NEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA--SASRIKGLASHR 280 (327)
Q Consensus 203 ~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~ 280 (327)
+.|+.|++||+++++.+..+.+|...|.+++|+ |++++|++|+.|+.|++||+++++.+..+.. +...|.+++|+|
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~--p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFF--PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred eCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc--CCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 999999999999999999999999999999995 9999999999999999999999988777653 335799999999
Q ss_pred --cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 281 --NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 281 --~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
++|++|+.||.|++||+.... .. .....|..+|++++|+|+.
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~--~~--~~~~~h~~~v~~~~~s~dg 324 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKAD--RA--GVLAGHDNRVSCLGVTDDG 324 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCC--EE--EEEECCSSCEEEEEECTTS
T ss_pred CCCEEEEECCCCeEEEEEcccCc--Ee--eEeecCCCcEEEEEEcCCC
Confidence 899999999999999998772 22 2234577899999999973
No 29
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.2e-44 Score=310.26 Aligned_cols=305 Identities=16% Similarity=0.262 Sum_probs=257.4
Q ss_pred eeeccCCcc-EEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482 8 FVTHSHTAS-VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (327)
Q Consensus 8 ~~~~~h~~~-v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~ 86 (327)
..+.+|... +.++.+++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|++ .|++|+.||+|++||++++
T Consensus 115 ~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~ 193 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG 193 (464)
T ss_dssp EEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT
T ss_pred EEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC
Confidence 355689887 57888899999999999999999999999999999999999999999988 9999999999999999999
Q ss_pred eEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcCCCceeeeeec------------------cccCcccc
Q psy7482 87 QLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVKGRSAYITNL------------------SSYGVGFE 146 (327)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------------------~~~~~~~~ 146 (327)
+....+ .+|... |.+++|++ +++++++++.||.|++||++++........ .....+..
T Consensus 194 ~~~~~~-~~h~~~-v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (464)
T 3v7d_B 194 CCTHVF-EGHNST-VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 271 (464)
T ss_dssp EEEEEE-CCCSSC-EEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS
T ss_pred cEEEEE-CCCCCc-cEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc
Confidence 999888 788887 99999994 778999999999999999987764322110 01122333
Q ss_pred ceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee
Q psy7482 147 NLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK 223 (327)
Q Consensus 147 ~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~ 223 (327)
.+.++ +++++++++++ |+.|++||+++++.+..+. |...+.+++|+|+ .++++|+.||.|++||+++++.+..+.
T Consensus 272 ~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 349 (464)
T 3v7d_B 272 SVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 349 (464)
T ss_dssp CEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred eEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence 45555 67788888887 9999999999999998888 8899999999998 899999999999999999999999999
Q ss_pred ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCcc
Q psy7482 224 ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDV 301 (327)
Q Consensus 224 ~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~ 301 (327)
+|...|.++++ ++.+|++++.||.|++||+.++....... +...+..++|++ .++++++ ||.|++||+.++
T Consensus 350 ~h~~~v~~~~~----~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g- 422 (464)
T 3v7d_B 350 GHTALVGLLRL----SDKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG- 422 (464)
T ss_dssp CCSSCEEEEEE----CSSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC-
T ss_pred CCCCcEEEEEE----cCCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC-
Confidence 99999999998 26899999999999999999988766654 555777788888 7888877 999999999998
Q ss_pred CCCceeeeecCCCCceEEEEeCCCC
Q psy7482 302 TREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 302 ~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
+........+...|.+++|+++.
T Consensus 423 --~~~~~~~~~~~~~v~~v~~~~~~ 445 (464)
T 3v7d_B 423 --KLVHANILKDADQIWSVNFKGKT 445 (464)
T ss_dssp --CEEESCTTTTCSEEEEEEEETTE
T ss_pred --cEEehhhccCCCcEEEEEecCCE
Confidence 23222234577899999998653
No 30
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.7e-44 Score=306.42 Aligned_cols=298 Identities=18% Similarity=0.321 Sum_probs=261.7
Q ss_pred eeccCCcc-EEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482 9 VTHSHTAS-VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (327)
Q Consensus 9 ~~~~h~~~-v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 87 (327)
.+.+|.+. +.++++++++|++|+.||+|++||+.+++.+..+.+|...|.+++|+ +++|++|+.||.|++||+.+++
T Consensus 113 ~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~ 190 (445)
T 2ovr_B 113 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE 190 (445)
T ss_dssp EEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE
T ss_pred EecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc
Confidence 45589886 57888899999999999999999999999999999999999999997 6699999999999999999999
Q ss_pred EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC
Q psy7482 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN 166 (327)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~ 166 (327)
....+ .+|... |.++.|+ ++.+++++.||.|++||+++++....+..+ ...+.+++| ++.++++++ |+
T Consensus 191 ~~~~~-~~h~~~-v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~-----~~~v~~~~~--~~~~l~~~~~dg 259 (445)
T 2ovr_B 191 CIHTL-YGHTST-VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGH-----VAAVRCVQY--DGRRVVSGAYDF 259 (445)
T ss_dssp EEEEE-CCCSSC-EEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECC-----SSCEEEEEE--CSSCEEEEETTS
T ss_pred EEEEE-CCCCCc-EEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCC-----cccEEEEEE--CCCEEEEEcCCC
Confidence 99988 788887 9999996 568999999999999999998876665433 345999998 677777776 99
Q ss_pred eEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEE
Q psy7482 167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCT 245 (327)
Q Consensus 167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~ 245 (327)
.|++||+++++.+..+. |...+.+++| ...++++++.|+.|++||+++++.+..+.+|...+.++.+ +++++++
T Consensus 260 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~ 334 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL----KDNILVS 334 (445)
T ss_dssp CEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE----ETTEEEE
T ss_pred EEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE----eCCEEEE
Confidence 99999999999999888 8889999999 3478999999999999999999999999999999988876 4679999
Q ss_pred ecCCCeEEEEEcCCCceeEEeec---ccCceEEEeeeCcEEEEEecCCcEEEEEccCccCCCceeee---ecCCCCceEE
Q psy7482 246 GNEESAITAYNLTDGSHLWHIKA---SASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVS---ATNDGCRFTC 319 (327)
Q Consensus 246 ~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~---~~~~~~~i~~ 319 (327)
++.||.|++||+++++.+..+.. |...|.+++|++++|++++.||.|++||+.++. ....+. ...+...|++
T Consensus 335 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~v~~ 412 (445)
T 2ovr_B 335 GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE--FIRNLVTLESGGSGGVVWR 412 (445)
T ss_dssp EETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC--EEEEEEECTTGGGTCEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCc--eeeeeeccccCCCCceEEE
Confidence 99999999999999999999986 888999999999999999999999999999883 222231 1346788999
Q ss_pred EEeCCCC
Q psy7482 320 LAIRPPV 326 (327)
Q Consensus 320 l~~~p~~ 326 (327)
++|+|+.
T Consensus 413 ~~~s~~~ 419 (445)
T 2ovr_B 413 IRASNTK 419 (445)
T ss_dssp EEECSSE
T ss_pred EEecCCE
Confidence 9999973
No 31
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.4e-45 Score=325.34 Aligned_cols=283 Identities=18% Similarity=0.322 Sum_probs=241.2
Q ss_pred eeccCCccEEEEEe---CCCEEEEecCCCeEEEEEccccc-----cccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482 9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRK-----QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (327)
Q Consensus 9 ~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 80 (327)
.+++|.+.|+++++ ++++|+||+.|++|++||+.+.. ....+.+|...|.+++|+|++++|++|+.||.|++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 45699999999999 45799999999999999987643 34567899999999999999999999999999999
Q ss_pred EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC--c
Q psy7482 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG--L 158 (327)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~ 158 (327)
||+.+++....+ .+|... |.+++|+|++++|++++.|++|++||....... .. ......|...|.+++|+|++ .
T Consensus 457 wd~~~~~~~~~~-~~h~~~-v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~-~~-~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 457 WDLAAGVSTRRF-VGHTKD-VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY-TI-SEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EETTTTEEEEEE-ECCSSC-EEEEEECTTSSCEEEEETTSCEEEECTTSCEEE-EE-CSSTTSCSSCEEEEEECSCSSSC
T ss_pred EECCCCcceeEE-eCCCCC-EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce-ee-ccCCCCCCCcEEEEEEeCCCCcc
Confidence 999999999888 889888 999999999999999999999999998654332 22 12223456679999999987 4
Q ss_pred EEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482 159 LYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF 235 (327)
Q Consensus 159 ~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 235 (327)
.+++++ |+.|++||+++++....+. |...|.+++|+|+ .++++++.||.|++||+++++.+..+.. ...+.+++|+
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~s 611 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFS 611 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEEC
T ss_pred eEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEc
Confidence 677776 9999999999999888887 8899999999999 8899999999999999999998887764 4579999994
Q ss_pred ecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc-------------------CceEEEeeeC--cEEEEEecCCcEEE
Q psy7482 236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA-------------------SRIKGLASHR--NHLICITSAGDLVV 294 (327)
Q Consensus 236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------------~~v~~~~~~~--~~l~~~~~dg~v~i 294 (327)
|++.++++++ ++.|++||+++++.+..+..+. ..+++++|+| ++|++|+.||.|++
T Consensus 612 --p~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~i 688 (694)
T 3dm0_A 612 --PNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRV 688 (694)
T ss_dssp --SSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred --CCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEE
Confidence 8888887765 5669999999998887765332 1378899999 99999999999999
Q ss_pred EEccC
Q psy7482 295 WELNE 299 (327)
Q Consensus 295 w~~~~ 299 (327)
|++..
T Consensus 689 W~i~~ 693 (694)
T 3dm0_A 689 WGIGR 693 (694)
T ss_dssp EEC--
T ss_pred EeccC
Confidence 99853
No 32
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.2e-45 Score=305.16 Aligned_cols=283 Identities=18% Similarity=0.208 Sum_probs=241.3
Q ss_pred ccCCccEEEEEeC------CCEEEEecCCCeEEEEEcccccccccccc-----ccccEEEEEECCC----CCeEEEecCC
Q psy7482 11 HSHTASVRSVAAT------SKLAASSGADETVVLYDMVKRKQSGALMQ-----HEGTITCLKFTPE----GSHLISCSDD 75 (327)
Q Consensus 11 ~~h~~~v~~~~~~------~~~l~~~~~dg~v~~w~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~~~~d 75 (327)
.+|.++|.+++|. ...+++++.++.|++||+.+++.+..+.. |...|++++|+|+ +++|++|+.|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 4899999999994 34566666678999999998887766654 5577999999998 6799999999
Q ss_pred CcEEEEEcCCCeEEEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEc
Q psy7482 76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWS 154 (327)
Q Consensus 76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 154 (327)
|.|++||+.+++....+ ..|... |.+++|+| ++++|++++.||.|++||+++++....+.. ...+...+.+++|+
T Consensus 95 g~i~v~d~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 95 GIIRIINPITMQCIKHY-VGHGNA-INELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG--VEGHRDEVLSADYD 170 (366)
T ss_dssp CEEEEECTTTCCEEEEE-ESCCSC-EEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS--TTSCSSCEEEEEEC
T ss_pred CEEEEEEchhceEeeee-cCCCCc-EEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc--cccccCceeEEEEC
Confidence 99999999999999888 778887 99999999 899999999999999999998877655421 12234569999999
Q ss_pred cCCcEEEeec-CCeEEEEEecCCceeeEec-----------------------------CCCceeEEEeecCceEEEeCC
Q psy7482 155 PEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-----------------------------SESKVHSVCFLNETTVCTGNE 204 (327)
Q Consensus 155 ~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-----------------------------~~~~i~~~~~~~~~~l~~~~~ 204 (327)
|+++++++++ |+.|++||+++++....+. +...|.+++|+ .+++++++.
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~ 249 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSC 249 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECS
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEec
Confidence 9999999887 9999999999876543332 78899999999 679999999
Q ss_pred CCcEEEEEcCCCce--------------eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc----eeEEe
Q psy7482 205 ESAITAYNLTDGSH--------------LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS----HLWHI 266 (327)
Q Consensus 205 d~~i~i~d~~~~~~--------------~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~ 266 (327)
|+.|++||+++++. +..+..|...+.+++|++++++++|++++.||.|++||+.+++ ....+
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 329 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTL 329 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEE
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEE
Confidence 99999999987644 7778889999999999743339999999999999999999876 34477
Q ss_pred ecc--cCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482 267 KAS--ASRIKGLASHR--NHLICITSAGDLVVWELN 298 (327)
Q Consensus 267 ~~~--~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~ 298 (327)
..| ...|++++|+| ++|++++.||.|++||+.
T Consensus 330 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 330 THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 777 78999999999 899999999999999985
No 33
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.5e-45 Score=300.32 Aligned_cols=277 Identities=12% Similarity=0.107 Sum_probs=218.5
Q ss_pred EEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC----------eEEEeEEecccCCceeeEE
Q psy7482 36 VVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW----------QLEKLFKKAHKGTAVNHIS 105 (327)
Q Consensus 36 v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----------~~~~~~~~~~~~~~v~~~~ 105 (327)
.+.|++....+ ..|...|.+++|+|||++|++++ |+++++||.... .........+... |.+++
T Consensus 16 ~r~w~~~~~~~----~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~ 89 (344)
T 4gqb_B 16 AREWNLPPNAP----ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAG-VADLT 89 (344)
T ss_dssp -------CCSC----SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSC-EEEEE
T ss_pred ccccCCCCCCc----ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCC-EEEEE
Confidence 46777654433 34677899999999999998887 667888863210 0001111234445 99999
Q ss_pred EecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-
Q psy7482 106 IHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK- 183 (327)
Q Consensus 106 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~- 183 (327)
|+|++ .|++++.||.|++||+++++......... ..|...|.+++|+|++++|++++ |+.|++||+++++.+..+.
T Consensus 90 ~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~-~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~ 167 (344)
T 4gqb_B 90 WVGER-GILVASDSGAVELWELDENETLIVSKFCK-YEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA 167 (344)
T ss_dssp EETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EeCCC-eEEEEECCCEEEEEeccCCCceeEeeccc-cCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 99985 68899999999999999988765543321 23456699999999999999997 9999999999999999998
Q ss_pred CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEee--ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482 184 SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIK--ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD 259 (327)
Q Consensus 184 ~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~ 259 (327)
|...|.+++|+|+ .++++++.|+.|++||+++++....+. .|...+.+++|++ .++++|++|+.|+.|++||+++
T Consensus 168 h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 168 HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHP-QQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECS-SCTTEEEEEETTSEEEEEESCC
T ss_pred cCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecC-CCCcceEEeccCCcEEEEECCC
Confidence 8999999999997 478999999999999999999887764 4556789999963 4677899999999999999999
Q ss_pred CceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 260 GSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 260 ~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
++++..+.+|...|++++|+| ++|++|+.||+|+|||+..+ +.+....|...|++++|+|+.
T Consensus 247 ~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~-----~~~~~~~H~~~V~~v~~sp~~ 311 (344)
T 4gqb_B 247 TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS-----ELFRSQAHRDFVRDATWSPLN 311 (344)
T ss_dssp --CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-----EEEEECCCSSCEEEEEECSSS
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-----cEEEEcCCCCCEEEEEEeCCC
Confidence 999999999999999999998 57999999999999999887 334456688899999999963
No 34
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.3e-44 Score=301.24 Aligned_cols=284 Identities=13% Similarity=0.213 Sum_probs=244.2
Q ss_pred cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc--cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 87 (327)
.|.++|.+++| ++++|++|+.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 58999999999 89999999999999999999887 888899999999999999999999999999999999999887
Q ss_pred EEEeEE-ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C
Q psy7482 88 LEKLFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q 165 (327)
Q Consensus 88 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~ 165 (327)
....+. ..|... |.+++|+|++++|++++.||.|++||++.++........ ...+...+.+++|+|+++++++++ |
T Consensus 86 ~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 86 WKPTLVILRINRA-ARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI-KKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EEEEEECCCCSSC-EEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE-CTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred eeeeEEeecCCCc-eeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee-ecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 655542 345555 999999999999999999999999999887642221111 112345699999999999999987 9
Q ss_pred CeEEEEEec------------------CCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeec
Q psy7482 166 NKAVVFSVE------------------KAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKAS 225 (327)
Q Consensus 166 ~~i~i~d~~------------------~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 225 (327)
+.+++||++ .++.+..+. +...+.+++|+|+ .++++++.|+.|++||+++++.+..+..|
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence 999999953 567777775 7889999999999 79999999999999999999999999999
Q ss_pred ccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC--Cc--------------------------------ee------EE
Q psy7482 226 ASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD--GS--------------------------------HL------WH 265 (327)
Q Consensus 226 ~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~--~~--------------------------------~~------~~ 265 (327)
..++.+++|+ |++.+++++ .|+.|++|++.+ ++ .. ..
T Consensus 244 ~~~v~~~~~~--~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (372)
T 1k8k_C 244 TLPLLAVTFI--TESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAG 320 (372)
T ss_dssp SCCEEEEEEE--ETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CC
T ss_pred CCCeEEEEEe--cCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccc
Confidence 9999999996 789988888 899999999987 42 00 22
Q ss_pred e-ecccCceEEEeeeC------cEEEEEecCCcEEEEEccCc
Q psy7482 266 I-KASASRIKGLASHR------NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 266 ~-~~~~~~v~~~~~~~------~~l~~~~~dg~v~iw~~~~~ 300 (327)
+ .+|..+|++++|.+ .+|++++.||.|++|++...
T Consensus 321 ~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 321 LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp CSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred ccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 3 48999999999764 49999999999999999876
No 35
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.1e-44 Score=300.29 Aligned_cols=277 Identities=15% Similarity=0.194 Sum_probs=232.5
Q ss_pred eeccCCccEEEEEe--CC-CEEEEecCCCeEEEEEccccccccccc--cccccEEEEEECC-CCCeEEEecCCCcEEEEE
Q psy7482 9 VTHSHTASVRSVAA--TS-KLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTP-EGSHLISCSDDGSIAIFR 82 (327)
Q Consensus 9 ~~~~h~~~v~~~~~--~~-~~l~~~~~dg~v~~w~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~ 82 (327)
.+.+|...|.+++| ++ ++|++|+.||.|++||+.+++....+. +|...|.+++|+| ++++|++++.|+.|++||
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 34589999999999 66 899999999999999999887776665 6999999999999 789999999999999999
Q ss_pred cCCCeEEEeEEeccc---CCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-
Q psy7482 83 VGSWQLEKLFKKAHK---GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL- 158 (327)
Q Consensus 83 ~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 158 (327)
+.+ +....+ ..+. .. |.+++|+|++++|++++.||.|++||++ ++....+.. +...|.+++|+|+++
T Consensus 148 ~~~-~~~~~~-~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~-----h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 148 FSG-SVIQVF-AKTDSWDYW-YCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKL-----HKAKVTHAEFNPRCDW 218 (383)
T ss_dssp TTS-CEEEEE-ECCCCSSCC-EEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEEC-----SSSCEEEEEECSSCTT
T ss_pred CCC-CceEEE-eccCCCCCC-eEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEecc-----CCCcEEEEEECCCCCC
Confidence 986 444454 3333 44 9999999999999999999999999994 555444432 234599999999998
Q ss_pred EEEeec-CCeEEEEEecC----CceeeEecCCCceeEEEeec-C-ceEEEeCCCCcEEEEEcCCCceeEEeeecc-----
Q psy7482 159 LYAIPI-QNKAVVFSVEK----AGVLQTLKSESKVHSVCFLN-E-TTVCTGNEESAITAYNLTDGSHLWQIKASA----- 226 (327)
Q Consensus 159 ~l~~~~-~~~i~i~d~~~----~~~~~~~~~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----- 226 (327)
++++++ |+.|++||+++ +..+..+.+...+.+++|+| + .++++++.|+.|++||+++++.+..+..|.
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ 298 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT
T ss_pred EEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc
Confidence 888887 99999999998 66777778999999999999 7 789999999999999999988877776553
Q ss_pred ------------cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec--ccCceEEEeeeC--cEEEEEecCC
Q psy7482 227 ------------SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA--SASRIKGLASHR--NHLICITSAG 290 (327)
Q Consensus 227 ------------~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~--~~l~~~~~dg 290 (327)
..+..+++ +|++++ +++.|+.|++||+.+++.+..+.+ |...+..++|+| ++|++++ ||
T Consensus 299 ~~~~~~~~~~p~~~~~~~~~--s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~ 373 (383)
T 3ei3_B 299 HLTPIKATWHPMYDLIVAGR--YPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GF 373 (383)
T ss_dssp TSCCCCCEECSSSSEEEEEC--BCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TT
T ss_pred cccceEEeccCCCCceEEEe--cCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CC
Confidence 23334555 367776 888999999999999999999987 456777889999 8888886 99
Q ss_pred cEEEEEccC
Q psy7482 291 DLVVWELNE 299 (327)
Q Consensus 291 ~v~iw~~~~ 299 (327)
.|++||+++
T Consensus 374 ~i~iw~~~~ 382 (383)
T 3ei3_B 374 NILIWNRED 382 (383)
T ss_dssp EEEEEECC-
T ss_pred cEEEEecCC
Confidence 999999875
No 36
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.8e-45 Score=304.23 Aligned_cols=286 Identities=15% Similarity=0.185 Sum_probs=215.6
Q ss_pred CEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC------CCcEEEEEcCCCeEEEeE---Eec
Q psy7482 25 KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD------DGSIAIFRVGSWQLEKLF---KKA 95 (327)
Q Consensus 25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~---~~~ 95 (327)
++++.++.+.....|++....+ ..|...|++++|+|||++|++|+. |+.|++|+..++.....+ ...
T Consensus 17 ~~~~~~~g~~~~~~w~~p~~~p----~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~ 92 (357)
T 4g56_B 17 NLYFQSNGSSKGSAWGRPVTAP----ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQ 92 (357)
T ss_dssp ---------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEE
T ss_pred ceEEecCCCccccccCCCCCCc----ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCC
Confidence 3444555577889999865433 469999999999999999999997 778999988776543221 145
Q ss_pred ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEec
Q psy7482 96 HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVE 174 (327)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~ 174 (327)
|... |.+++|+|++. +++++.||.|++||+.+++......... ..|...|.+++|+|++++|++++ |+.|++||++
T Consensus 93 ~~~~-V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~-~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~ 169 (357)
T 4g56_B 93 TEAG-VTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAK-YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS 169 (357)
T ss_dssp CSSC-EEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEE-CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CCCC-EEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeecc-CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 6666 99999999875 5667889999999999887654332221 23456699999999999999987 9999999999
Q ss_pred CCceeeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEee--ecccceEEEEEEecCC-CcEEEEecC
Q psy7482 175 KAGVLQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIK--ASASRIKGLVFFSIPQ-ETTVCTGNE 248 (327)
Q Consensus 175 ~~~~~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~s~~-~~~l~~~~~ 248 (327)
+++.+..+. |...|.+++|+|+ .++++++.|+.|++||++++++...+. .|...+.+++|+ |+ +.+|++|+.
T Consensus 170 ~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~s--p~~~~~la~g~~ 247 (357)
T 4g56_B 170 QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWH--PEKDDTFACGDE 247 (357)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEEC--TTSTTEEEEEES
T ss_pred CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhh--hcccceEEEeec
Confidence 999999988 8899999999997 578999999999999999988766553 466789999996 65 678999999
Q ss_pred CCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCC
Q psy7482 249 ESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRP 324 (327)
Q Consensus 249 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p 324 (327)
|+.|++||+++++++..+.+|...|++++|+| ++|++++.||+|+|||++.+ +.+....|...|++++|+|
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-----~~~~~~~H~~~V~~vafsP 321 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-----EVFRDLSHRDFVTGVAWSP 321 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-----EEEEECCCSSCEEEEEECS
T ss_pred ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-----cEeEECCCCCCEEEEEEeC
Confidence 99999999999999999999999999999998 68999999999999999887 3444557889999999998
No 37
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.7e-45 Score=300.91 Aligned_cols=286 Identities=14% Similarity=0.146 Sum_probs=240.0
Q ss_pred eccCCccEEEEEe--CCC-EEEEecC---CCeEEEEEcccccccccc-ccccccEEEEEECCC---CCeEEEecCCCcEE
Q psy7482 10 THSHTASVRSVAA--TSK-LAASSGA---DETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPE---GSHLISCSDDGSIA 79 (327)
Q Consensus 10 ~~~h~~~v~~~~~--~~~-~l~~~~~---dg~v~~w~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~ 79 (327)
.++|...|.+++| ++. ++++|+. ||.|++||+.+++..... .+|...|.+++|+|+ +++|++|+.||.|+
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 93 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH 93 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence 3589999999999 564 5567766 999999999988765443 368999999999998 69999999999999
Q ss_pred EEEcCCCe-EEEeEEecccCCceeeEEE------ecCCCEEEEEeCCCCEEEEEcCCCc-eeeeeeccccCccccceEEE
Q psy7482 80 IFRVGSWQ-LEKLFKKAHKGTAVNHISI------HPSGKLALSVGKDKTLRTWNLVKGR-SAYITNLSSYGVGFENLDSV 151 (327)
Q Consensus 80 iw~~~~~~-~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~ 151 (327)
+||+.+++ ....+ ..|... |.++.| +|++++|++++.||.|++||+++++ ....+.... ......+.++
T Consensus 94 iwd~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~v~~~ 170 (357)
T 3i2n_A 94 IWNLEAPEMPVYSV-KGHKEI-INAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ-GENKRDCWTV 170 (357)
T ss_dssp EECTTSCSSCSEEE-CCCSSC-EEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT-TSCCCCEEEE
T ss_pred EEeCCCCCccEEEE-Eecccc-eEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC-CCCCCceEEE
Confidence 99999887 77777 788887 999955 6789999999999999999999876 444433222 1123358888
Q ss_pred E----EccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeec---C-ceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482 152 V----WSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLN---E-TTVCTGNEESAITAYNLTDGSHLWQI 222 (327)
Q Consensus 152 ~----~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~---~-~~l~~~~~d~~i~i~d~~~~~~~~~~ 222 (327)
+ |+|+++++++++ ++.|++||+++++......+...+.+++|+| + +++++++.||.|++||+++++.+..+
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence 8 788999999987 8999999999999877777999999999998 7 88999999999999999887765555
Q ss_pred e-----ecccceEEEEEEecCCCc-EEEEecCCCeEEEEEcCCC-------------------ceeEEeecccCceEEEe
Q psy7482 223 K-----ASASRIKGLVFFSIPQET-TVCTGNEESAITAYNLTDG-------------------SHLWHIKASASRIKGLA 277 (327)
Q Consensus 223 ~-----~~~~~v~~~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~-------------------~~~~~~~~~~~~v~~~~ 277 (327)
. +|...|.+++|+ |+++ +|++++.||.|++||++++ +.+..+.+|..+|++++
T Consensus 251 ~~~~~~~~~~~v~~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~ 328 (357)
T 3i2n_A 251 ASVSEKAHKSTVWQVRHL--PQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLD 328 (357)
T ss_dssp EEEEEECCSSCEEEEEEE--TTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEE
T ss_pred eeeccCCCcCCEEEEEEC--CCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEE
Confidence 4 899999999996 8888 8999999999999999754 36778889999999999
Q ss_pred eeC--cEEE-EEecCCcEEEEEccCc
Q psy7482 278 SHR--NHLI-CITSAGDLVVWELNED 300 (327)
Q Consensus 278 ~~~--~~l~-~~~~dg~v~iw~~~~~ 300 (327)
|+| ++|+ +++.||.|++|++...
T Consensus 329 ~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 329 WSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp ECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EcCCCCeEEEEecCCCcEEEEECCCc
Confidence 999 6776 8999999999999875
No 38
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.5e-44 Score=307.11 Aligned_cols=295 Identities=13% Similarity=0.285 Sum_probs=243.2
Q ss_pred eccCCccEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482 10 THSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (327)
Q Consensus 10 ~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~ 89 (327)
..+|...|.++++++++|++|+.||.|++||+.+++....+.+|...|.+++| ++++|++|+.||.|++||+.+++..
T Consensus 129 ~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 129 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp CCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE
T ss_pred ccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE
Confidence 34678889999999999999999999999999999999999999999999999 6889999999999999999999999
Q ss_pred EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeE
Q psy7482 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKA 168 (327)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i 168 (327)
..+ ..|... |.+++|+ +..+++++.||.|++||+++++....... ...+...+.+++| +++++++++ |+.|
T Consensus 207 ~~~-~~h~~~-v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~--~~~~l~s~~~dg~i 278 (435)
T 1p22_A 207 NTL-IHHCEA-VLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRV--LVGHRAAVNVVDF--DDKYIVSASGDRTI 278 (435)
T ss_dssp EEE-CCCCSC-EEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEE--ECCCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred EEE-cCCCCc-EEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeE--ecCCCCcEEEEEe--CCCEEEEEeCCCeE
Confidence 888 788877 9999997 45999999999999999998776532111 1223456999998 677888886 9999
Q ss_pred EEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEec
Q psy7482 169 VVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN 247 (327)
Q Consensus 169 ~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~ 247 (327)
++||+++++.+..+. |...+.++.++ ++++++|+.||.|++||+++++.+..+.+|...|.++++ ++.+|++|+
T Consensus 279 ~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~----~~~~l~sg~ 353 (435)
T 1p22_A 279 KVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGA 353 (435)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC----CSSEEEEEE
T ss_pred EEEECCcCcEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe----cCCEEEEEe
Confidence 999999999999888 88899999995 479999999999999999999999999999999999986 688999999
Q ss_pred CCCeEEEEEcCCCc---------eeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceE
Q psy7482 248 EESAITAYNLTDGS---------HLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFT 318 (327)
Q Consensus 248 ~d~~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~ 318 (327)
.||.|++||+.+++ ++..+.+|.+.|.+++|++.+|++++.||.|++||+.... . ........+..
T Consensus 354 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~--~---~~~~~~~~~~~ 428 (435)
T 1p22_A 354 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDP--A---AQAEPPRSPSR 428 (435)
T ss_dssp TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC----------------------
T ss_pred CCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCC--C---cccCCCCCCcc
Confidence 99999999997766 7889999999999999988999999999999999998873 1 11222334455
Q ss_pred EEEeCC
Q psy7482 319 CLAIRP 324 (327)
Q Consensus 319 ~l~~~p 324 (327)
++.|.+
T Consensus 429 ~~~~~~ 434 (435)
T 1p22_A 429 TYTYIS 434 (435)
T ss_dssp ------
T ss_pred ceeeec
Confidence 666654
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1e-44 Score=306.79 Aligned_cols=300 Identities=11% Similarity=0.117 Sum_probs=250.5
Q ss_pred EEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe
Q psy7482 17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (327)
Q Consensus 17 v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 94 (327)
+++++| ++++|++|+.||.|++||+.+++....+..| ..+....|+|++++|++|+.||.|++||+.+++....+ .
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~ 136 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID-Q 136 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET-T
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec-c
Confidence 335667 8999999999999999999999888888776 45556678999999999999999999999998887776 6
Q ss_pred cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEe
Q psy7482 95 AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSV 173 (327)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~ 173 (327)
.|... |.+++|+|++++|++++.||.|++||+++++....+.. |...|.+++|+|+++++++++ |+.|++||+
T Consensus 137 ~h~~~-v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 137 AHVSE-ITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG-----HRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp SSSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC-----CSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred cccCc-cEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC-----CCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 78887 99999999999999999999999999999887665542 344599999999999999887 999999999
Q ss_pred cCCceeeEec----CCCcee---------------------EEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee-ecc
Q psy7482 174 EKAGVLQTLK----SESKVH---------------------SVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK-ASA 226 (327)
Q Consensus 174 ~~~~~~~~~~----~~~~i~---------------------~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~ 226 (327)
++++.+..+. +...+. +++|+|+ .++++++.||.|++||+++++.+..+. .|.
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 290 (420)
T 3vl1_A 211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT 290 (420)
T ss_dssp TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS
T ss_pred CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC
Confidence 9999888876 333444 4455677 689999999999999999998877764 478
Q ss_pred cceEEEEEEecCCCc-EEEEecCCCeEEEEEcCCCc-eeEEeec-ccCceEEEeeeC-cEEEEEecCCcEEEEEccCccC
Q psy7482 227 SRIKGLVFFSIPQET-TVCTGNEESAITAYNLTDGS-HLWHIKA-SASRIKGLASHR-NHLICITSAGDLVVWELNEDVT 302 (327)
Q Consensus 227 ~~v~~~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~~-~~~~~~~-~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~ 302 (327)
..+.+++|+ |++. +|++|+.||.|++||+++++ ++..+.. |...|.++.+.+ .+|++++.||.|++|++.....
T Consensus 291 ~~v~~~~~~--~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 291 CSCNSLTVD--GNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPES 368 (420)
T ss_dssp SCEEEEEEC--SSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTC
T ss_pred CCceeEEEe--CCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCC
Confidence 899999995 8888 99999999999999999875 4777776 677899998877 8999999999999999987531
Q ss_pred CC-----ceeeeecCCCCceEEEEeCCCC
Q psy7482 303 RE-----PQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 303 ~~-----~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
.. ........+...|.+++|+|+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 397 (420)
T 3vl1_A 369 ERPAIEFETPTFLVSNDDAVSQFCYVSDD 397 (420)
T ss_dssp CSCEECTTSCEEECCSSCCCCEEEEECCS
T ss_pred CccceeccCccEEccCCcceEEEEEccCC
Confidence 11 1112233466789999999974
No 40
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-45 Score=309.48 Aligned_cols=282 Identities=14% Similarity=0.240 Sum_probs=244.6
Q ss_pred CCccEEEEEe--CCC-EEEEe----------cCCCeEEEEEccccc---cccccccccccEEEEEECCCCCeEEEecCCC
Q psy7482 13 HTASVRSVAA--TSK-LAASS----------GADETVVLYDMVKRK---QSGALMQHEGTITCLKFTPEGSHLISCSDDG 76 (327)
Q Consensus 13 h~~~v~~~~~--~~~-~l~~~----------~~dg~v~~w~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 76 (327)
+...|.+++| +++ +|++| +.|+.|++||+.+++ .+..+ .|...|++++|+|++++|++++.||
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 4567888999 665 99999 889999999999876 33333 5889999999999999999999999
Q ss_pred cEEEEEcCC----CeEEEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCc------eeeeeeccccCccc
Q psy7482 77 SIAIFRVGS----WQLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGR------SAYITNLSSYGVGF 145 (327)
Q Consensus 77 ~i~iw~~~~----~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~ 145 (327)
.|++||+.+ .+....+ ..|... |.+++|+|+ +++|++++.||.|++||+++++ .... ......+.
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~ 165 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARF-SNHSSS-VKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLT--PGQSMSSV 165 (416)
T ss_dssp CEEEECCSSTTSCCCEEEEC-CCSSSC-CCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBC--CCCSCCSS
T ss_pred eEEEeecccccccccchhhc-cCCccc-eEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccc--cccccCCC
Confidence 999999987 3466666 778877 999999998 8999999999999999998876 2221 22223345
Q ss_pred cceEEEEEccC-CcEEEeec-CCeEEEEEecCCceeeEec-C------CCceeEEEeecC--ceEEEeCCCC---cEEEE
Q psy7482 146 ENLDSVVWSPE-GLLYAIPI-QNKAVVFSVEKAGVLQTLK-S------ESKVHSVCFLNE--TTVCTGNEES---AITAY 211 (327)
Q Consensus 146 ~~v~~~~~~~~-~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~------~~~i~~~~~~~~--~~l~~~~~d~---~i~i~ 211 (327)
..+.+++|+|+ +.++++++ |+.|++||+++++.+..+. + ...+.+++|+|+ .++++++.|+ .|++|
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 66999999999 67888876 9999999999999988887 3 688999999998 4799999998 99999
Q ss_pred EcCCC-ceeEEee-ecccceEEEEEEecC-CCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEE
Q psy7482 212 NLTDG-SHLWQIK-ASASRIKGLVFFSIP-QETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLIC 285 (327)
Q Consensus 212 d~~~~-~~~~~~~-~~~~~v~~~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~ 285 (327)
|++++ +++..+. +|...|.+++|+ | ++++|++++.|+.|++||+.+++++..+.+|...|.+++|+| .+|++
T Consensus 246 d~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s 323 (416)
T 2pm9_A 246 DLRNANTPLQTLNQGHQKGILSLDWC--HQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFAC 323 (416)
T ss_dssp ETTSTTSCSBCCCSCCSSCEEEEEEC--SSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEE
T ss_pred eCCCCCCCcEEeecCccCceeEEEeC--CCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEE
Confidence 99986 5677787 899999999995 7 999999999999999999999999999999999999999999 69999
Q ss_pred EecCCcEEEEEccCcc
Q psy7482 286 ITSAGDLVVWELNEDV 301 (327)
Q Consensus 286 ~~~dg~v~iw~~~~~~ 301 (327)
++.||.|++|++....
T Consensus 324 ~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 324 ASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CCSSSEEEEEESCCCC
T ss_pred EecCCcEEEEEccCCC
Confidence 9999999999998763
No 41
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.1e-43 Score=293.27 Aligned_cols=274 Identities=14% Similarity=0.231 Sum_probs=234.0
Q ss_pred ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482 45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (327)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 124 (327)
+....+.+|...|++++|+|++++|++|+.||+|++||..+++....+ ..+... |.+++|+|++.++++++.|+.+++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~-~~~~~~-v~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAV-TMPCTW-VMACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSSC-CCEEEECTTSSEEEEESTTSEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEE-ecCCCC-EEEEEECCCCCEEEEeeCCCCEEE
Confidence 345678899999999999999999999999999999999999888887 667776 999999999999999999999999
Q ss_pred EEcCCCceeeee-eccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC---ce
Q psy7482 125 WNLVKGRSAYIT-NLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE---TT 198 (327)
Q Consensus 125 wd~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~---~~ 198 (327)
|++......... .......|...+.+++|+|++..+++++ |+.|++||+++++.+..+. |...+.+++++|+ .+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 998654211000 0011123455699999999999888887 9999999999999998887 8889999999874 68
Q ss_pred EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc--cCceEEE
Q psy7482 199 VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS--ASRIKGL 276 (327)
Q Consensus 199 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~ 276 (327)
+++|+.||.|++||+++++.+..+.+|...|.+++|+ |++.+|++++.|+.|++||++.++.+..+..+ ...+.++
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~--p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY--PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV 290 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEe--CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEE
Confidence 9999999999999999999999999999999999995 89999999999999999999998877766644 3478999
Q ss_pred eeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 277 ASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 277 ~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
+|+| .+|++++.||.|++||+..+. .......|..+|++++|+|+.
T Consensus 291 ~~s~~g~~l~~g~~d~~i~vwd~~~~~----~~~~l~~h~~~v~~l~~spdg 338 (354)
T 2pbi_B 291 DFSLSGRLLFAGYNDYTINVWDVLKGS----RVSILFGHENRVSTLRVSPDG 338 (354)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCS----EEEEECCCSSCEEEEEECTTS
T ss_pred EEeCCCCEEEEEECCCcEEEEECCCCc----eEEEEECCCCcEEEEEECCCC
Confidence 9999 899999999999999998772 122234578899999999973
No 42
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=291.60 Aligned_cols=276 Identities=17% Similarity=0.276 Sum_probs=225.1
Q ss_pred ccccccccccc-cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE--eEEecccCCceeeEEEecCCCEEEEEeCCCC
Q psy7482 45 KQSGALMQHEG-TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK--LFKKAHKGTAVNHISIHPSGKLALSVGKDKT 121 (327)
Q Consensus 45 ~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 121 (327)
+++..+.+|.. .|.+++|+|++++|++|+.|++|++||+.++.... .+..+|... |.+++|+|++++|++++.|+.
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~-v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRT-VRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSC-EEEEEECTTSSEEEEEETTSC
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCc-EEEEEECCCCCEEEEEECCCc
Confidence 45667888987 99999999999999999999999999998876443 232567777 999999999999999999999
Q ss_pred EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce---eeEec-CCCceeEEEeecC
Q psy7482 122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV---LQTLK-SESKVHSVCFLNE 196 (327)
Q Consensus 122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~---~~~~~-~~~~i~~~~~~~~ 196 (327)
+++||+..+.......+.. |...|.+++|+|++++|++++ |+.|++||++.+.. +..+. |...|.+++|+|+
T Consensus 85 v~iw~~~~~~~~~~~~~~~---h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEG---HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp EEEEEECCC-EEEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred EEEEEccCCCeEEEEEccC---CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 9999998765433333333 355699999999999999998 99999999987643 34444 7889999999998
Q ss_pred -ceEEEeCCCCcEEEEEcCCCc--eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC-------------
Q psy7482 197 -TTVCTGNEESAITAYNLTDGS--HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG------------- 260 (327)
Q Consensus 197 -~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~------------- 260 (327)
.+|++++.|+.|++||.+.++ ....+.+|...|.+++|+ |++++|++++.|+.|++||....
T Consensus 162 ~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~s--p~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 162 QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD--PSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---C
T ss_pred CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEEC--CCCCEEEEEeCCCeEEEeccccCCCCccceeeccCC
Confidence 789999999999999998775 356788999999999995 99999999999999999996432
Q ss_pred --ceeEEeec-ccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCc--eeee---ecCCCCceEEEEeCCCC
Q psy7482 261 --SHLWHIKA-SASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREP--QRVS---ATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 261 --~~~~~~~~-~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~--~~~~---~~~~~~~i~~l~~~p~~ 326 (327)
+++..+.+ |...|++++|+| ..|++++.|+.|++|+......... ..+. ...|...|++++|+|+.
T Consensus 240 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 315 (345)
T 3fm0_A 240 SWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE 315 (345)
T ss_dssp EEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS
T ss_pred ccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCC
Confidence 23344544 888999999999 8999999999999999876531111 1111 13577899999999963
No 43
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.2e-45 Score=303.49 Aligned_cols=287 Identities=17% Similarity=0.248 Sum_probs=240.0
Q ss_pred CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEE
Q psy7482 34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLA 113 (327)
Q Consensus 34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 113 (327)
..+..|+..+..+...+.+|.+.|++++|+|++++|++|+.|++|++||+.+++....+ ..|... |.+++|+|++++|
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~-~~h~~~-v~~~~~s~~g~~l 123 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAI-KLHCPW-VMECAFAPNGQSV 123 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE-ECCCTT-CCCCEECTTSSEE
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEE-ecCCCC-EEEEEECCCCCEE
Confidence 34556777777888899999999999999999999999999999999999999999888 788887 9999999999999
Q ss_pred EEEeCCCCEEEEEcCCCceeee-e-eccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEecCCceeeEec------
Q psy7482 114 LSVGKDKTLRTWNLVKGRSAYI-T-NLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVEKAGVLQTLK------ 183 (327)
Q Consensus 114 ~~~~~dg~i~iwd~~~~~~~~~-~-~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~~~~~~~~~------ 183 (327)
++++.|+.+++||+.+...... . .......|...+.++.|.|++ ..+++++ |+.|++||+++++.+..+.
T Consensus 124 as~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~ 203 (380)
T 3iz6_a 124 ACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSG 203 (380)
T ss_dssp EECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSS
T ss_pred EEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCC
Confidence 9999999999999875431100 0 011123445668999999974 4577776 9999999999999887762
Q ss_pred CCCceeEEEeec-C-ceEEEeCCCCcEEEEEcC-CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482 184 SESKVHSVCFLN-E-TTVCTGNEESAITAYNLT-DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG 260 (327)
Q Consensus 184 ~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~ 260 (327)
|...+.++++++ + .++++|+.|+.|++||++ ..+.+..+.+|...|.+++|+ |++++|++|+.|+.|++||++++
T Consensus 204 h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~--p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 204 HTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFF--PDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp CCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEEC--TTSSEEEEECSSSCEEEEETTTT
T ss_pred CccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEe--cCCCeEEEEcCCCeEEEEECCCC
Confidence 678899999987 4 789999999999999998 456788899999999999995 99999999999999999999999
Q ss_pred ceeEEeeccc-------CceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeee--cCCCCceEEEEeCCCC
Q psy7482 261 SHLWHIKASA-------SRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSA--TNDGCRFTCLAIRPPV 326 (327)
Q Consensus 261 ~~~~~~~~~~-------~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~--~~~~~~i~~l~~~p~~ 326 (327)
+.+..+..+. ..|++++|+| ++|++|+.||.|++||+..+. ....+.. ..|...|++++|+|+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~--~~~~~~~~~~~h~~~v~~l~~s~dg 356 (380)
T 3iz6_a 282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE--MVLNLGTLQNSHEGRISCLGLSSDG 356 (380)
T ss_dssp EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC--EEEEECCSCSSCCCCCCEEEECSSS
T ss_pred cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc--eEEEEecccCCCCCceEEEEECCCC
Confidence 9888776543 2489999999 999999999999999998772 2222221 3577899999999974
No 44
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-43 Score=298.96 Aligned_cols=276 Identities=11% Similarity=0.097 Sum_probs=247.8
Q ss_pred CCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE
Q psy7482 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (327)
Q Consensus 13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~ 90 (327)
|.+.|.+++| ++++|++|+.||.|++|| .+++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++...
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 7889999999 899999999999999999 6788888899999999999999999999999999999999999998888
Q ss_pred eEEecccCCc--------------eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC
Q psy7482 91 LFKKAHKGTA--------------VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE 156 (327)
Q Consensus 91 ~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 156 (327)
.+ ..+.... +.++.|++++ .+++++.+|.|++||+++++....+.. +...+.+++|+|+
T Consensus 186 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~-----~~~~i~~~~~~~~ 258 (425)
T 1r5m_A 186 HF-ELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIG-----HHGPISVLEFNDT 258 (425)
T ss_dssp EE-CCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECC-----CSSCEEEEEEETT
T ss_pred Ee-eccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeecc-----CCCceEEEEECCC
Confidence 77 3333211 8889999875 688899999999999998877655432 2345999999999
Q ss_pred CcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482 157 GLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF 234 (327)
Q Consensus 157 ~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 234 (327)
++++++++ |+.|++||+++++....+. +...+.+++|+|++.+++++.|+.|++||+++++.+..+..|..++.+++|
T Consensus 259 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 338 (425)
T 1r5m_A 259 NKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRI 338 (425)
T ss_dssp TTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEE
Confidence 99999887 9999999999999888887 889999999999999999999999999999999999999999999999999
Q ss_pred EecCCCcEEEEecCCCeEEEEEcCCCc--------------------eeEEeecccC--ceEEEeeeC--cEEEEEecCC
Q psy7482 235 FSIPQETTVCTGNEESAITAYNLTDGS--------------------HLWHIKASAS--RIKGLASHR--NHLICITSAG 290 (327)
Q Consensus 235 ~~s~~~~~l~~~~~d~~i~i~d~~~~~--------------------~~~~~~~~~~--~v~~~~~~~--~~l~~~~~dg 290 (327)
+ |++++|++++.||.|++||+.+++ ++..+..|.. .|.+++|+| ++|++++.||
T Consensus 339 s--~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 416 (425)
T 1r5m_A 339 S--QDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQ 416 (425)
T ss_dssp C--TTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSS
T ss_pred c--CCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCc
Confidence 5 999999999999999999999888 8899999976 999999999 8999999999
Q ss_pred cEEEEEcc
Q psy7482 291 DLVVWELN 298 (327)
Q Consensus 291 ~v~iw~~~ 298 (327)
.|++|+++
T Consensus 417 ~i~iw~~~ 424 (425)
T 1r5m_A 417 EGSVVAIP 424 (425)
T ss_dssp CCEEEECC
T ss_pred eEEEEeec
Confidence 99999986
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=9.7e-44 Score=291.93 Aligned_cols=302 Identities=12% Similarity=0.205 Sum_probs=253.7
Q ss_pred ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (327)
Q Consensus 11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~ 88 (327)
.-|.++|.+++| +|++++++..++.+..|+...........+|...|++++|+|++++|++++ ||.|++||+.+++.
T Consensus 6 ~~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~ 84 (337)
T 1gxr_A 6 AMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN 84 (337)
T ss_dssp EEEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC
T ss_pred cccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc
Confidence 346788999999 999999988888787776665554445557999999999999999999999 99999999987653
Q ss_pred EEeEE--e--cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482 89 EKLFK--K--AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI 164 (327)
Q Consensus 89 ~~~~~--~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 164 (327)
...+. . .|... |.+++|+|++++|++++.||.|++||+++++.........+ ...+.+++|+|+++++++++
T Consensus 85 ~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~ 160 (337)
T 1gxr_A 85 KSPVSQLDCLNRDNY-IRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS---APACYALAISPDSKVCFSCC 160 (337)
T ss_dssp CSCSEEEECSCTTSB-EEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECS---SSCEEEEEECTTSSEEEEEE
T ss_pred eeeeecccccCCCCc-EEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccC---CCceEEEEECCCCCEEEEEe
Confidence 33221 1 45665 99999999999999999999999999998774333333322 34599999999999999887
Q ss_pred -CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCc
Q psy7482 165 -QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET 241 (327)
Q Consensus 165 -~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~ 241 (327)
++.|++||+++++.+..+. |...+.+++|+|+ .++++++.|+.|++||+++++.+..+. +...+.+++|+ |+++
T Consensus 161 ~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s--~~~~ 237 (337)
T 1gxr_A 161 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYC--PTGE 237 (337)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC--TTSS
T ss_pred CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEEC--CCCC
Confidence 8999999999999988887 7889999999998 789999999999999999998877764 67789999994 9999
Q ss_pred EEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEE
Q psy7482 242 TVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTC 319 (327)
Q Consensus 242 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~ 319 (327)
++++++.|+.|++||+.+++. ..+..|...|.+++|+| ++|++++.||.|++|++..+. . +....+...|++
T Consensus 238 ~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~---~--~~~~~~~~~v~~ 311 (337)
T 1gxr_A 238 WLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA---S--IFQSKESSSVLS 311 (337)
T ss_dssp EEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---E--EEEEECSSCEEE
T ss_pred EEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe---E--EEEecCCCcEEE
Confidence 999999999999999988765 46778999999999999 899999999999999999882 2 233456788999
Q ss_pred EEeCCCC
Q psy7482 320 LAIRPPV 326 (327)
Q Consensus 320 l~~~p~~ 326 (327)
++|+|+.
T Consensus 312 ~~~s~~~ 318 (337)
T 1gxr_A 312 CDISVDD 318 (337)
T ss_dssp EEECTTS
T ss_pred EEECCCC
Confidence 9999974
No 46
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.5e-43 Score=320.87 Aligned_cols=288 Identities=18% Similarity=0.249 Sum_probs=255.6
Q ss_pred eeEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEE
Q psy7482 2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIA 79 (327)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 79 (327)
+++.+.+. +|.+.|.+++| ++++||+|+.||.|++||+.+++.+..+.+|..+|++++|+|++++|++++.||.|+
T Consensus 3 l~~~~~~~--~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 3 LDIKKTFS--NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp CCCEEEEE--EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred cccceeee--cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 44555554 89999999999 899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEcc-CC
Q psy7482 80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSP-EG 157 (327)
Q Consensus 80 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 157 (327)
+||+.+++....+ ..|... |.+++|+|++++|++++.||.|++||++++ ........ +...+.+++|+| ++
T Consensus 81 vw~~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-----~~~~v~~~~~~p~~~ 153 (814)
T 3mkq_A 81 VFNYNTGEKVVDF-EAHPDY-IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-----HEHFVMCVAFNPKDP 153 (814)
T ss_dssp EEETTTCCEEEEE-ECCSSC-EEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-----CSSCEEEEEEETTEE
T ss_pred EEECCCCcEEEEE-ecCCCC-EEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-----CCCcEEEEEEEcCCC
Confidence 9999999999888 788887 999999999999999999999999999876 33333322 234599999999 78
Q ss_pred cEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeec--C-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEE
Q psy7482 158 LLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLN--E-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKG 231 (327)
Q Consensus 158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~--~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~ 231 (327)
..+++++ |+.|++||+.+++....+. +...+.+++|+| + .++++++.||.|++||+++++.+..+.+|...+.+
T Consensus 154 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~ 233 (814)
T 3mkq_A 154 STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF 233 (814)
T ss_dssp EEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 8888887 9999999999888777776 448899999998 6 78999999999999999999999999999999999
Q ss_pred EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCc
Q psy7482 232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~ 300 (327)
++|+ |+++++++++.||.|++||+.+++.+..+..|...+.+++|+| ..+++++.++.+.+|++...
T Consensus 234 ~~~~--~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 234 AVFH--PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp EEEC--SSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred EEEc--CCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 9995 9999999999999999999999999999999999999999999 33455556778889987654
No 47
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.5e-43 Score=333.24 Aligned_cols=306 Identities=16% Similarity=0.240 Sum_probs=265.7
Q ss_pred eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC
Q psy7482 7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (327)
Q Consensus 7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 84 (327)
.+.+.+|.+.|++++| ++++||+|+.||+|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 3456799999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482 85 SWQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI 162 (327)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 162 (327)
+++.+..+ .+|... |.+++|+| ++.++++++.||.|++||+++++....+.. |...|.+++|+|+++++++
T Consensus 688 ~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~-----h~~~v~~~~~sp~~~~l~s 760 (1249)
T 3sfz_A 688 TGKLVHTY-DEHSEQ-VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG-----HTNSVNHCRFSPDDELLAS 760 (1249)
T ss_dssp TCCEEEEE-ECCSSC-EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC-----CSSCEEEEEECSSTTEEEE
T ss_pred CCceEEEE-cCCCCc-EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC-----CCCCEEEEEEecCCCEEEE
Confidence 99999998 788887 99999999 556899999999999999999887655432 3455999999999999999
Q ss_pred ec-CCeEEEEEecCCceeeEe--------------------------------------------------------cCC
Q psy7482 163 PI-QNKAVVFSVEKAGVLQTL--------------------------------------------------------KSE 185 (327)
Q Consensus 163 ~~-~~~i~i~d~~~~~~~~~~--------------------------------------------------------~~~ 185 (327)
++ ||.|++||+++++....+ .+.
T Consensus 761 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~ 840 (1249)
T 3sfz_A 761 CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH 840 (1249)
T ss_dssp EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSS
T ss_pred EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCC
Confidence 87 999999998876543322 245
Q ss_pred CceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC------
Q psy7482 186 SKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT------ 258 (327)
Q Consensus 186 ~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~------ 258 (327)
..+.+++|+|+ ..+++++.++.|++||+.++..+..+.+|...|.+++|+ |+++++++++.|+.|++||+.
T Consensus 841 ~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~s--pdg~~l~s~s~dg~v~vw~~~~~~~~~ 918 (1249)
T 3sfz_A 841 STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFS--PDGSSFLTASDDQTIRVWETKKVCKNS 918 (1249)
T ss_dssp SCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEEHHHHHSCC
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEEC--CCCCEEEEEeCCCeEEEEEccccceee
Confidence 67889999998 889999999999999999999999999999999999994 889889988888888888743
Q ss_pred -------------------------------------------------------------------------CCceeEE
Q psy7482 259 -------------------------------------------------------------------------DGSHLWH 265 (327)
Q Consensus 259 -------------------------------------------------------------------------~~~~~~~ 265 (327)
+++....
T Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~ 998 (1249)
T 3sfz_A 919 AIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSS 998 (1249)
T ss_dssp SSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEE
T ss_pred eecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeee
Confidence 2334455
Q ss_pred eecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 266 IKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 266 ~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
+.+|...|++++|+| ++|++++.||.|++|++.++ .......+...|.+++|+|+.
T Consensus 999 ~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~-----~~~~~~~~~~~v~~~~~~~~~ 1056 (1249)
T 3sfz_A 999 GVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTG-----DYVFLQAHQETVKDFRLLQDS 1056 (1249)
T ss_dssp CCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTT-----EEECCBCCSSCEEEEEECSSS
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-----ceEEEecCCCcEEEEEEcCCC
Confidence 667888999999999 89999999999999999887 233345677889999999863
No 48
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.1e-43 Score=294.59 Aligned_cols=283 Identities=14% Similarity=0.203 Sum_probs=241.7
Q ss_pred EeeeeccCCcc--EEEEEeCCCEEEEecCCCeEEEEEcccccccccccc-ccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482 6 QTFVTHSHTAS--VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQ-HEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (327)
Q Consensus 6 ~~~~~~~h~~~--v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 82 (327)
+.+...+|... +.+++|+++.+++++.|+.|++||+.+++....+.. |...|++++|+|++++|++|+.||.|++||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd 162 (401)
T 4aez_A 83 RVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYD 162 (401)
T ss_dssp EEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence 34455566654 555777777888899999999999999988777665 789999999999999999999999999999
Q ss_pred cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482 83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYA 161 (327)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 161 (327)
+.+++....+ ..|... |.+++|+ ++++++++.||.|++||++.. .....+.. +...+.+++|+|++++++
T Consensus 163 ~~~~~~~~~~-~~~~~~-v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~ 233 (401)
T 4aez_A 163 VESQTKLRTM-AGHQAR-VGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQG-----HSSEVCGLAWRSDGLQLA 233 (401)
T ss_dssp TTTCCEEEEE-CCCSSC-EEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEEC-----CSSCEEEEEECTTSSEEE
T ss_pred CcCCeEEEEe-cCCCCc-eEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcC-----CCCCeeEEEEcCCCCEEE
Confidence 9999999888 788887 9999995 679999999999999999854 33333322 244599999999999999
Q ss_pred eec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC--ceEEEeC--CCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482 162 IPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE--TTVCTGN--EESAITAYNLTDGSHLWQIKASASRIKGLVFF 235 (327)
Q Consensus 162 ~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~--~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 235 (327)
+++ |+.|++||+++++....+. +...|.+++|+|+ .++++++ .|+.|++||+++++.+..+. +...+.+++|+
T Consensus 234 s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s 312 (401)
T 4aez_A 234 SGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWS 312 (401)
T ss_dssp EEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEC
T ss_pred EEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEEC
Confidence 987 8999999999999888886 8899999999996 5666654 79999999999999888886 56779999995
Q ss_pred ecCCCcEEEE--ecCCCeEEEEEcCCCcee--EEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 236 SIPQETTVCT--GNEESAITAYNLTDGSHL--WHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 236 ~s~~~~~l~~--~~~d~~i~i~d~~~~~~~--~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
|+++++++ |+.||.|++||+.+++.. ..+.+|...|.+++|+| .+|++++.||.|++|++..+
T Consensus 313 --~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 313 --PHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp --SSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred --CCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 89999998 668999999999987644 45779999999999999 89999999999999999987
No 49
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8e-43 Score=283.72 Aligned_cols=269 Identities=16% Similarity=0.247 Sum_probs=233.5
Q ss_pred ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482 45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (327)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 124 (327)
.....+.+|...|++++|+|++++|++++.||.|++|++.+++....+ .+|... |.+++|+|++++|++++.||.|++
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLG-ISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSEEEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh-ccCCCc-eEEEEEcCCCCEEEEECCCCEEEE
Confidence 445677899999999999999999999999999999999999988888 788887 999999999999999999999999
Q ss_pred EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEE
Q psy7482 125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCT 201 (327)
Q Consensus 125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~ 201 (327)
||+++++....+..+ ...+.+++|+|+++++++++ |+.|++||+++++.+..+. |..++.+++|+|+ .++++
T Consensus 92 wd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 92 WDVSSGKCLKTLKGH-----SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp EETTTCCEEEEEECC-----SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcEEEEEcCC-----CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 999998876655433 34599999999999999987 9999999999999988887 7889999999998 78999
Q ss_pred eCCCCcEEEEEcCCCceeEEee-ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEE--ee
Q psy7482 202 GNEESAITAYNLTDGSHLWQIK-ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGL--AS 278 (327)
Q Consensus 202 ~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~--~~ 278 (327)
++.|+.|++||+++++.+..+. .+..++..++|. |++++|++++.|+.|++||+.+++.+..+.+|...+..+ .+
T Consensus 167 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
T 4ery_A 167 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS--PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 244 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCSSCCCEEEEEEC--TTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEE
T ss_pred EeCCCcEEEEECCCCceeeEEeccCCCceEEEEEC--CCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEE
Confidence 9999999999999998877764 456689999994 999999999999999999999999999999887654433 34
Q ss_pred eC---cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 279 HR---NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 279 ~~---~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
++ .+|++|+.||.|++||+..+. . ......|...|.+++|+|+.
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd~~~~~---~-~~~~~~h~~~v~~~~~~p~~ 291 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWNLQTKE---I-VQKLQGHTDVVISTACHPTE 291 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEETTTCC---E-EEEECCCSSCEEEEEECSSS
T ss_pred EeCCCcEEEEECCCCEEEEEECCCch---h-hhhhhccCCcEEEEeecCcC
Confidence 33 789999999999999998872 2 12223577889999999974
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.5e-45 Score=304.19 Aligned_cols=277 Identities=17% Similarity=0.224 Sum_probs=223.2
Q ss_pred cCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc--ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKR--KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 87 (327)
.|.++|++++| ++++||+|+.|+.|++||+.++ +....+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 47789999999 8999999999999999999988 7888999999999999999999999999999999999999876
Q ss_pred ---EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce---eeeeeccccCccccceEEEEEccCCcEEE
Q psy7482 88 ---LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS---AYITNLSSYGVGFENLDSVVWSPEGLLYA 161 (327)
Q Consensus 88 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 161 (327)
....+ ..|... |.+++|+|++++|++++.|+.|++||+++++. ...+.. .+...+.+++|+|++++++
T Consensus 89 ~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 89 TWKQTLVL-LRLNRA-ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR----PLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp CCCCEEEC-CCCSSC-EEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS----SCCSCEEEEEECTTSSEEE
T ss_pred ceeeeeEe-cccCCc-eEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec----ccCCCeEEEEEcCCCCEEE
Confidence 44555 567777 99999999999999999999999999988763 222221 1345699999999999999
Q ss_pred eec-CCeEEEEEec------------------CCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce---
Q psy7482 162 IPI-QNKAVVFSVE------------------KAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH--- 218 (327)
Q Consensus 162 ~~~-~~~i~i~d~~------------------~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~--- 218 (327)
+++ |+.|++||++ .++.+..+.|...|.+++|+|+ .++++++.|+.|++||+++++.
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence 987 9999999995 2445555568889999999999 7899999999999999999987
Q ss_pred -eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc--e-------------------------e-------
Q psy7482 219 -LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS--H-------------------------L------- 263 (327)
Q Consensus 219 -~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~--~-------------------------~------- 263 (327)
+..+..|..+|.+++|+ |++++|++++.++.+ +|+..... . .
T Consensus 243 ~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (377)
T 3dwl_C 243 ALITVKLSQLPLRSLLWA--NESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTA 319 (377)
T ss_dssp ECCCEECSSSCEEEEEEE--ETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--------
T ss_pred eeEeecCCCCceEEEEEc--CCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccc
Confidence 78889999999999996 899999999877766 66554211 0 0
Q ss_pred --EEe----------------ecccCceEEEeeeC---c---EEEEEecCCcEEEEEc
Q psy7482 264 --WHI----------------KASASRIKGLASHR---N---HLICITSAGDLVVWEL 297 (327)
Q Consensus 264 --~~~----------------~~~~~~v~~~~~~~---~---~l~~~~~dg~v~iw~~ 297 (327)
..+ ..|.+.|+++++.+ . .|+|++.||.|++||+
T Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 320 LRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 011 12889999999776 2 6999999999999985
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.1e-43 Score=296.99 Aligned_cols=272 Identities=16% Similarity=0.192 Sum_probs=235.2
Q ss_pred CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCcee
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~ 102 (327)
++++|++|+.||.|++||+.+++....+.+|...|++++|+|++++|++++.|+.|++||+.+++....+ .+|... |.
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~h~~~-v~ 185 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL-IGHRAT-VT 185 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE-ECCSSC-EE
T ss_pred CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE-cCCCCc-EE
Confidence 8999999999999999999999998888899999999999999999999999999999999999998888 788888 99
Q ss_pred eEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccC-------------------ccccceEEEEEccCCcEEEee
Q psy7482 103 HISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYG-------------------VGFENLDSVVWSPEGLLYAIP 163 (327)
Q Consensus 103 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~l~~~ 163 (327)
+++|+|++++|++++.||.|++||+++++....+...... .+...+.+++|+|++++++++
T Consensus 186 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (420)
T 3vl1_A 186 DIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAG 265 (420)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEE
T ss_pred EEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEE
Confidence 9999999999999999999999999998877666543211 011335556668899999988
Q ss_pred c-CCeEEEEEecCCceeeEec--CCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCce-eEEeee-cccceEEEEEEe
Q psy7482 164 I-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGSH-LWQIKA-SASRIKGLVFFS 236 (327)
Q Consensus 164 ~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~-~~~~~~-~~~~v~~~~~~~ 236 (327)
+ ||.|++||+++++....+. +...+.+++|+|+ . ++++++.||.|++||+++++. +..+.. |...+.++.+
T Consensus 266 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-- 343 (420)
T 3vl1_A 266 HVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-- 343 (420)
T ss_dssp ETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE--
T ss_pred cCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe--
Confidence 7 9999999999998887776 6789999999998 5 899999999999999998754 677776 6677888866
Q ss_pred cCCCcEEEEecCCCeEEEEEcCCCc---------eeEEeecccCceEEEeeeC--c---EEEEEecCCcEEEEEccC
Q psy7482 237 IPQETTVCTGNEESAITAYNLTDGS---------HLWHIKASASRIKGLASHR--N---HLICITSAGDLVVWELNE 299 (327)
Q Consensus 237 s~~~~~l~~~~~d~~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~~--~---~l~~~~~dg~v~iw~~~~ 299 (327)
+++++|++++.|+.|++|++.... ....+..|...|.+++|+| . .+++++.+|.+.+|+++.
T Consensus 344 -~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 344 -AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp -ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred -CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 688999999999999999988742 2334667888999999999 5 688888999999999865
No 52
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-42 Score=283.01 Aligned_cols=274 Identities=14% Similarity=0.193 Sum_probs=215.7
Q ss_pred ccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC--eEEEeEEec-ccCCceeeEEEecCCCEEEEEeCC
Q psy7482 43 KRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW--QLEKLFKKA-HKGTAVNHISIHPSGKLALSVGKD 119 (327)
Q Consensus 43 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d 119 (327)
+.+++..+.+|.++|.+++|+|+ +|++|+.|+.|++||+..+ +....+... |... |.+++|+|++++|++++.|
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~-v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKA-IRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSC-EEEEEECTTSSEEEEEETT
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCC-EEEEEECCCCCEEEEEeCC
Confidence 44566788899999999999987 9999999999999999875 344444233 7776 9999999999999999999
Q ss_pred CCEEEEEcCCCcee--eeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC----ceeeEec-CCCceeEE
Q psy7482 120 KTLRTWNLVKGRSA--YITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA----GVLQTLK-SESKVHSV 191 (327)
Q Consensus 120 g~i~iwd~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~----~~~~~~~-~~~~i~~~ 191 (327)
+.|++||++..... ..........|...|.+++|+|++++|++++ |+.|++||++.. +.+..+. |...|.++
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v 159 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV 159 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEE
Confidence 99999998643210 0000111123456799999999999999998 999999999532 3455665 88899999
Q ss_pred EeecC-ceEEEeCCCCcEEEEEcCCC--ceeEEeeecccceEEEEEEecCC--CcEEEEecCCCeEEEEEcCCC------
Q psy7482 192 CFLNE-TTVCTGNEESAITAYNLTDG--SHLWQIKASASRIKGLVFFSIPQ--ETTVCTGNEESAITAYNLTDG------ 260 (327)
Q Consensus 192 ~~~~~-~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~------ 260 (327)
+|+|+ .+|++++.|+.|++||..++ +++..+.+|...|.+++|+ |+ +.+|++++.|+.|++||+..+
T Consensus 160 ~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 160 IWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFD--KTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp EECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC--CSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEec--CCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 99998 89999999999999998776 5778889999999999996 66 778999999999999998764
Q ss_pred --ceeEEeec-ccCceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCceeeee--cCCCC-ceEEEEeCC
Q psy7482 261 --SHLWHIKA-SASRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQRVSA--TNDGC-RFTCLAIRP 324 (327)
Q Consensus 261 --~~~~~~~~-~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~--~~~~~-~i~~l~~~p 324 (327)
.....+.. |...|++++|++ .+|++++.||.|++|+...+ ....+.. ..|.. .|++++|+|
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~---~~~~~~~~~~~h~~~~v~~v~~~~ 305 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDG---EWKVFAKRALCHGVYEINVVKWLE 305 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETT---EEEEEEEESCTTTTSCEEEEEEC-
T ss_pred eeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCC---ceEEEeccccccccceEEEEEEec
Confidence 34455554 889999999999 89999999999999999766 2222221 33554 899999998
No 53
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-44 Score=304.93 Aligned_cols=287 Identities=13% Similarity=0.169 Sum_probs=243.5
Q ss_pred ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccc----cccccccccccccEEEEEECCC-CCeEEEecCCCcEEEEEc
Q psy7482 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVK----RKQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRV 83 (327)
Q Consensus 11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~ 83 (327)
..|...|.+++| ++++|++|+.||.|++||+.+ .+....+.+|...|++++|+|+ +++|++++.|+.|++||+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 368999999999 899999999999999999987 3577888899999999999998 899999999999999999
Q ss_pred CCCe------EEEeE--EecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeecccc-CccccceEEEEE
Q psy7482 84 GSWQ------LEKLF--KKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSY-GVGFENLDSVVW 153 (327)
Q Consensus 84 ~~~~------~~~~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 153 (327)
.+++ ....+ ...|... |.+++|+|+ +.+|++++.||.|++||+++++....+..... ..+...+.+++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 222 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDE-VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEW 222 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCC-CCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEE
T ss_pred CCCccccccccccccccccCCCCC-eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEE
Confidence 8876 22221 1456666 999999998 78999999999999999999887766655421 112345999999
Q ss_pred ccCC-cEEEeec-CC---eEEEEEecCC-ceeeEec--CCCceeEEEeec-C-ceEEEeCCCCcEEEEEcCCCceeEEee
Q psy7482 154 SPEG-LLYAIPI-QN---KAVVFSVEKA-GVLQTLK--SESKVHSVCFLN-E-TTVCTGNEESAITAYNLTDGSHLWQIK 223 (327)
Q Consensus 154 ~~~~-~~l~~~~-~~---~i~i~d~~~~-~~~~~~~--~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~~~~~~~~ 223 (327)
+|++ .++++++ ++ .|++||++++ +....+. |...|.+++|+| + .++++++.|+.|++||+++++.+..+.
T Consensus 223 ~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 223 HPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp CSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE
T ss_pred CCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec
Confidence 9997 5777776 77 9999999986 5666665 788999999999 6 789999999999999999999999999
Q ss_pred ecccceEEEEEEecCCC-cEEEEecCCCeEEEEEcCCCceeEEeec----------------------------------
Q psy7482 224 ASASRIKGLVFFSIPQE-TTVCTGNEESAITAYNLTDGSHLWHIKA---------------------------------- 268 (327)
Q Consensus 224 ~~~~~v~~~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------------------------------- 268 (327)
.|...|.+++|+ |++ .+|++++.|+.|++||+.++........
T Consensus 303 ~~~~~v~~~~~s--~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (416)
T 2pm9_A 303 ARGNWCFKTKFA--PEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPT 380 (416)
T ss_dssp CSSSCCCCEEEC--TTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCS
T ss_pred CCCCceEEEEEC--CCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCc
Confidence 999999999995 888 8999999999999999987663322211
Q ss_pred -ccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 269 -SASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 269 -~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
|..++.+++|+| ++|++++.||.|+||++.++
T Consensus 381 ~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 381 WYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp TTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred cccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 567788999999 89999999999999999865
No 54
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-43 Score=296.34 Aligned_cols=278 Identities=12% Similarity=0.203 Sum_probs=230.2
Q ss_pred ccCCccEEEEEe---CCCEEEEecCCCeEEEEEccc---ccccc-ccc-cccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVK---RKQSG-ALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (327)
Q Consensus 11 ~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~---~~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 82 (327)
.+|.+.|++++| ++++||+|+.||+|++||+.+ +.... .+. .|...|++++|+|++++|++++.||.|++||
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd 139 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLK 139 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 689999999999 578999999999999999987 33221 222 5899999999999999999999999999999
Q ss_pred cC---CCeEEEeEEec------------ccCCceeeEE--EecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccc
Q psy7482 83 VG---SWQLEKLFKKA------------HKGTAVNHIS--IHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGF 145 (327)
Q Consensus 83 ~~---~~~~~~~~~~~------------~~~~~v~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 145 (327)
++ +++....+ .. +... +.++. +++++.+|++++.||.|++||+++++....+.... +.
T Consensus 140 ~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---h~ 214 (437)
T 3gre_A 140 VNHYQQESEVKFL-NCECIRKINLKNFGKNEY-AVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP---RH 214 (437)
T ss_dssp EEEEEETTEEEEE-EEEEEEEEEGGGGSSCCC-EEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG---GG
T ss_pred eccccCCceeecc-ccceeEEEEccCcccccC-ceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC---CC
Confidence 94 44444333 11 2233 66666 55789999999999999999999998877665432 23
Q ss_pred cceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeec----C-ceEEEeCCCCcEEEEEcCCCc
Q psy7482 146 ENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLN----E-TTVCTGNEESAITAYNLTDGS 217 (327)
Q Consensus 146 ~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~----~-~~l~~~~~d~~i~i~d~~~~~ 217 (327)
..|.+++|+|+++++++++ ||.|++||+++++.+..+. +..+|.+++|+| + .++++++.||.|++||+++++
T Consensus 215 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 215 GAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp CCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 4599999999999999987 9999999999999988874 677899996665 4 489999999999999999998
Q ss_pred eeEEeee--------------------------cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec---
Q psy7482 218 HLWQIKA--------------------------SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA--- 268 (327)
Q Consensus 218 ~~~~~~~--------------------------~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--- 268 (327)
.+..+.+ |...|.+++|. ++++|++|+.|+.|++||+.+++.+..+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~---~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 371 (437)
T 3gre_A 295 CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS---NDKILLTDEATSSIVMFSLNELSSSKAVISPSR 371 (437)
T ss_dssp EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE---TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--
T ss_pred EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC---CceEEEecCCCCeEEEEECCCcccceEEecccc
Confidence 8777653 55568888883 679999999999999999999987777665
Q ss_pred ----------------------------------ccCceEEEeeeC----cEEEEEecCCcEEEEE
Q psy7482 269 ----------------------------------SASRIKGLASHR----NHLICITSAGDLVVWE 296 (327)
Q Consensus 269 ----------------------------------~~~~v~~~~~~~----~~l~~~~~dg~v~iw~ 296 (327)
|...|++++|.+ .+|++|+.||.|+||+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 372 FSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 788999999987 4999999999999995
No 55
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-41 Score=280.34 Aligned_cols=271 Identities=17% Similarity=0.203 Sum_probs=218.1
Q ss_pred ccccccccccccEEEEEE-----CC-CCCeEEEecCCCcEEEEEcCCC-------eEEEeEEecccCCceeeEEEecCCC
Q psy7482 45 KQSGALMQHEGTITCLKF-----TP-EGSHLISCSDDGSIAIFRVGSW-------QLEKLFKKAHKGTAVNHISIHPSGK 111 (327)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~-----~~-~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (327)
+....+.+|.+.|++++| ++ ++++|++|+.|++|++||+.+. .....+ .+|... |.+++|+|++.
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l-~~h~~~-V~~~~~~~~~~ 89 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKAL-TGHNHF-VSDLALSQENC 89 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEE-CCCSSC-EEEEEECSSTT
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchh-ccCCCc-eEEEEECCCCC
Confidence 455678899999999999 76 8999999999999999999753 345556 788887 99999999999
Q ss_pred EEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe---cCCCc
Q psy7482 112 LALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL---KSESK 187 (327)
Q Consensus 112 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~---~~~~~ 187 (327)
++++++.|+.|++||+++++....+.. |...|.+++|+|+++++++++ |+.|++||+......... .|...
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~-----h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVG-----HQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDW 164 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEEC-----CCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSC
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcC-----CCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCce
Confidence 999999999999999999887665543 244599999999999999887 999999999854333332 36788
Q ss_pred eeEEEeecC-----------ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482 188 VHSVCFLNE-----------TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYN 256 (327)
Q Consensus 188 i~~~~~~~~-----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d 256 (327)
+.+++|+|+ .++++++.|+.|++|| ...+....+.+|...|.+++|+ |++++|++|+.|+.|++||
T Consensus 165 v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s--~~g~~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 165 VSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSIS--PNGKYIATGGKDKKLLIWD 241 (343)
T ss_dssp EEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEEC--TTSSEEEEEETTCEEEEEE
T ss_pred eeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEEC--CCCCEEEEEcCCCeEEEEE
Confidence 999999987 3799999999999999 4566777889999999999994 9999999999999999999
Q ss_pred cCCCc-eeEEeecccCceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCceeee---------ecCCCCceEEEEeCCC
Q psy7482 257 LTDGS-HLWHIKASASRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQRVS---------ATNDGCRFTCLAIRPP 325 (327)
Q Consensus 257 ~~~~~-~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~---------~~~~~~~i~~l~~~p~ 325 (327)
+.+.. ....+ .+...|.+++|+| ..+++++.|+.|++|++.+........+. ...+...|++++|+|+
T Consensus 242 ~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 320 (343)
T 2xzm_R 242 ILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL 320 (343)
T ss_dssp SSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS
T ss_pred CCCCcccceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC
Confidence 95443 44444 3456799999999 44555667999999999876311111111 0135677999999997
Q ss_pred C
Q psy7482 326 V 326 (327)
Q Consensus 326 ~ 326 (327)
.
T Consensus 321 g 321 (343)
T 2xzm_R 321 G 321 (343)
T ss_dssp S
T ss_pred C
Confidence 3
No 56
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.3e-43 Score=298.69 Aligned_cols=280 Identities=14% Similarity=0.214 Sum_probs=220.4
Q ss_pred ccCCccEEEEEe---CCCEEEEecCCCeEEEEEccccccc--cccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcC
Q psy7482 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQS--GALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVG 84 (327)
Q Consensus 11 ~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~ 84 (327)
.+|...|+||+| ++++||+|+.||.|+|||+.+++.. ..+.+|.+.|++++|+| ++++|++|+.||+|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 478999999999 5679999999999999999876543 45568999999999998 68899999999999999998
Q ss_pred CCeEEEeEEeccc-CCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-EEEe
Q psy7482 85 SWQLEKLFKKAHK-GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-LYAI 162 (327)
Q Consensus 85 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~ 162 (327)
++...... ..+. ...+.+++|+|++++|++|+.||.|++||++.. .+..+ ..|...|.+++|+|++. ++++
T Consensus 196 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~-----~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 196 GNILRVFA-SSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNL-----RMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp SCEEEEEE-CCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCS-----BCCSSCEEEEEECTTCSSEEEE
T ss_pred CCceeEEe-ccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEE-----ecccceEEeeeecCCCceEEEE
Confidence 76544333 3222 223789999999999999999999999998643 32222 23455699999999886 6767
Q ss_pred ec-CCeEEEEEecCCceeeEe----cCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccc------eE
Q psy7482 163 PI-QNKAVVFSVEKAGVLQTL----KSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASR------IK 230 (327)
Q Consensus 163 ~~-~~~i~i~d~~~~~~~~~~----~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------v~ 230 (327)
++ |+.|++||+++.+....+ .|...|.+++|+|+ .+|++++.||.|++||+++++....+..|... +.
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence 76 999999999887654433 37889999999999 89999999999999999998877776655431 22
Q ss_pred EEEEEecCCCcEEEEec------------CCCeEEEEEcCCCceeEEee-cccCceEEE-eeeC--cEEEEEecCCcEEE
Q psy7482 231 GLVFFSIPQETTVCTGN------------EESAITAYNLTDGSHLWHIK-ASASRIKGL-ASHR--NHLICITSAGDLVV 294 (327)
Q Consensus 231 ~~~~~~s~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~-~~~~--~~l~~~~~dg~v~i 294 (327)
...|+ |++.++++++ .++.|++||..+++.+..+. +|...|.++ +|+| .+|++|+ |+.|+|
T Consensus 349 ~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~i 425 (435)
T 4e54_B 349 KAAWH--PRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILI 425 (435)
T ss_dssp BCEEC--SSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEE
T ss_pred EEEEc--CCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEE
Confidence 33442 5565555543 34679999999999888765 677888887 6999 7777765 889999
Q ss_pred EEccCc
Q psy7482 295 WELNED 300 (327)
Q Consensus 295 w~~~~~ 300 (327)
|+++++
T Consensus 426 W~~~~g 431 (435)
T 4e54_B 426 WSQQEA 431 (435)
T ss_dssp CCCC--
T ss_pred EECCcC
Confidence 999887
No 57
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.4e-43 Score=289.40 Aligned_cols=276 Identities=11% Similarity=0.131 Sum_probs=220.4
Q ss_pred CccEEEEEe--CCCEEEEecCC-------CeEEEEEccccccc----------cccccccccEEEEEECCCCCeEEEe--
Q psy7482 14 TASVRSVAA--TSKLAASSGAD-------ETVVLYDMVKRKQS----------GALMQHEGTITCLKFTPEGSHLISC-- 72 (327)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~d-------g~v~~w~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~l~~~-- 72 (327)
.-+|.+++| ++++|++|+.+ +.|++|++...... ..+..|...|.++++. ++.+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 358999999 99999998754 35999998755321 2356788888888775 4455554
Q ss_pred ---------cCCCcEEEEEcCCCeEEEeE-E-------ecccCCceeeEEEecCCCEEEEEe--CCCCEEEEEcCCCcee
Q psy7482 73 ---------SDDGSIAIFRVGSWQLEKLF-K-------KAHKGTAVNHISIHPSGKLALSVG--KDKTLRTWNLVKGRSA 133 (327)
Q Consensus 73 ---------~~d~~i~iw~~~~~~~~~~~-~-------~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~ 133 (327)
+.|+.+++|++...+..... . ..+... +.+++|+|||+++++++ .|++|++||+++++..
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDY-TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCC-EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccC-EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 45788999998654322111 0 112233 78999999999987654 6899999999999887
Q ss_pred eeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec---CCCceeEEEeecC-ceEEEeCCCC---
Q psy7482 134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTGNEES--- 206 (327)
Q Consensus 134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~~~d~--- 206 (327)
..+... ..|.+++|+|+++++++++++.+.+|+..+++.+.... +...+.+++|+|+ ..+++++.++
T Consensus 171 ~~~~~~------~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 171 FEIETR------GEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp EEEECS------SCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred EEeCCC------CceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 665432 33999999999999999998888999888887665433 6778999999999 6788887776
Q ss_pred -cEEEEEcCCCce----eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEe-ecccCceEEEeeeC
Q psy7482 207 -AITAYNLTDGSH----LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHI-KASASRIKGLASHR 280 (327)
Q Consensus 207 -~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~ 280 (327)
.+++|++..... ...+.+|..+|++++| +|+|++||+|+.|+.|+|||+++++++..+ .+|..+|++++|+|
T Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~--Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp 322 (365)
T 4h5i_A 245 IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV--DMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISP 322 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE--CTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECT
T ss_pred eEEeecccccceecceeeeeecCCCCCeEeEEE--CCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECC
Confidence 688899876653 3456789999999999 499999999999999999999999999875 78999999999999
Q ss_pred --cEEEEEecCCcEEEEEccCc
Q psy7482 281 --NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 281 --~~l~~~~~dg~v~iw~~~~~ 300 (327)
++||++|.|++|+||+++..
T Consensus 323 dg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 323 DSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSCEEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999999765
No 58
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-41 Score=277.33 Aligned_cols=269 Identities=20% Similarity=0.234 Sum_probs=224.1
Q ss_pred ccccccccccccEEEEEECCCC-CeEEEecCCCcEEEEEcCC-----CeEEEeEEecccCCceeeEEEecCCCEEEEEeC
Q psy7482 45 KQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGS-----WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK 118 (327)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 118 (327)
.+..++.+|.+.|++++|+|++ ++|++|+.|++|++|++.. +..+..+ .+|... |.+++|+|++++|++++.
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~-~~h~~~-v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSF-KGHSHI-VQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEE-ECCSSC-EEEEEECTTSSEEEEEET
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEE-eCCccc-EEEEEECCCCCEEEEEeC
Confidence 3456788999999999999965 8999999999999999864 2345566 788888 999999999999999999
Q ss_pred CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-
Q psy7482 119 DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE- 196 (327)
Q Consensus 119 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~- 196 (327)
|++|++||+++++....+.. |...|.+++|+|++.++++++ |+.|++||++.........|...+.++.+.|.
T Consensus 86 D~~v~~wd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVG-----HKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNE 160 (319)
T ss_dssp TSEEEEEETTTTEEEEEEEC-----CSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC-
T ss_pred CCEEEEEECCCCCeeEEEcc-----CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCC
Confidence 99999999999987665543 244599999999999999987 99999999975443333348899999999985
Q ss_pred ------ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482 197 ------TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA 270 (327)
Q Consensus 197 ------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 270 (327)
..+++++.|+.|++||+++.+....+.+|...|.+++|+ |++++|++++.|+.|++||+.+++.+..+..+
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s--p~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~- 237 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTAS--PDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ- 237 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEEC--TTSSEEEEEETTCEEEEEETTTTEEEEEEECC-
T ss_pred CCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEc--CCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-
Confidence 279999999999999999999999999999999999995 99999999999999999999999999888865
Q ss_pred CceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeee------cCCCCceEEEEeCCCC
Q psy7482 271 SRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSA------TNDGCRFTCLAIRPPV 326 (327)
Q Consensus 271 ~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~------~~~~~~i~~l~~~p~~ 326 (327)
..|.+++|+| .+|++++ ++.+++|+++... ....+.. ..+...+.+++|+|+.
T Consensus 238 ~~v~~~~~sp~~~~la~~~-~~~i~v~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~spdg 298 (319)
T 3frx_A 238 DEVFSLAFSPNRYWLAAAT-ATGIKVFSLDPQY--LVDDLRPEFAGYSKAAEPHAVSLAWSADG 298 (319)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTEEEEEEETTEE--EEEEECCCCTTCCGGGCCCEEEEEECTTS
T ss_pred CcEEEEEEcCCCCEEEEEc-CCCcEEEEeCcCe--eeeccCccccccccCcCcceeEEEECCCC
Confidence 5899999999 6666655 5569999998762 1111111 1234568999999973
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.3e-41 Score=301.31 Aligned_cols=310 Identities=16% Similarity=0.198 Sum_probs=251.1
Q ss_pred eeeccCCccEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccccccc---cEEEEEECCC-CCeEEEecCCCcEEE
Q psy7482 8 FVTHSHTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEG---TITCLKFTPE-GSHLISCSDDGSIAI 80 (327)
Q Consensus 8 ~~~~~h~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~d~~i~i 80 (327)
..+.+|...|.+++| +++ ++++++.|+.|++||+.+++.+..+.+|.. .|++++|+|+ +++|++++.||.|++
T Consensus 154 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 154 GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISC 233 (615)
T ss_dssp EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred eeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 345589999999999 665 899999999999999999999999999999 9999999999 999999999999999
Q ss_pred EEcCCCeEEEeEEe---cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc----------------
Q psy7482 81 FRVGSWQLEKLFKK---AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY---------------- 141 (327)
Q Consensus 81 w~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---------------- 141 (327)
||+.+++....+.. .|... |.+++|+ ++++|++++.||.|++||+++++....+.....
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~-v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (615)
T 1pgu_A 234 FDGKSGEFLKYIEDDQEPVQGG-IFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGR 311 (615)
T ss_dssp EETTTCCEEEECCBTTBCCCSC-EEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTE
T ss_pred EECCCCCEeEEecccccccCCc-eEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCe
Confidence 99999998887733 67776 9999999 999999999999999999998776555443310
Q ss_pred ------------------------Cc---------------------------------cccceEEEEEccCCcEEEeec
Q psy7482 142 ------------------------GV---------------------------------GFENLDSVVWSPEGLLYAIPI 164 (327)
Q Consensus 142 ------------------------~~---------------------------------~~~~v~~~~~~~~~~~l~~~~ 164 (327)
.. +...|.+++| +++..+++++
T Consensus 312 l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~ 390 (615)
T 1pgu_A 312 IISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSIS 390 (615)
T ss_dssp EEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEE
T ss_pred EEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEe
Confidence 01 1223344444 2233444443
Q ss_pred -CCeEEEEEec----------------------------------CCceeeEecCCCceeEEEeecCceEEEeCC-CCcE
Q psy7482 165 -QNKAVVFSVE----------------------------------KAGVLQTLKSESKVHSVCFLNETTVCTGNE-ESAI 208 (327)
Q Consensus 165 -~~~i~i~d~~----------------------------------~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~-d~~i 208 (327)
|+.+++||+. +++.+..+.+...+.+++|+ ..++++++. |+.|
T Consensus 391 ~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~d~~i 469 (615)
T 1pgu_A 391 WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS-QNYVAVGLEEGNTI 469 (615)
T ss_dssp TTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC-SSEEEEEETTTSCE
T ss_pred CCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc-CCEEEEeecCCCeE
Confidence 6666666554 34444555566778888888 678888888 9999
Q ss_pred EEEEcCCCcee-EEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec-ccCceEEEeeeC------
Q psy7482 209 TAYNLTDGSHL-WQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA-SASRIKGLASHR------ 280 (327)
Q Consensus 209 ~i~d~~~~~~~-~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~------ 280 (327)
++||+.+++.. ..+..|...|.+++| +|++++|++++.|+.|++||+.+++.+..+.+ |...|++++|+|
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~ 547 (615)
T 1pgu_A 470 QVFKLSDLEVSFDLKTPLRAKPSYISI--SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGAN 547 (615)
T ss_dssp EEEETTEEEEEEECSSCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC----
T ss_pred EEEECCCccccccccCCccCceEEEEE--CCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccccc
Confidence 99999887655 667789999999999 49999999999999999999999999999988 999999999976
Q ss_pred ------cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 281 ------NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 281 ------~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
++|++++.||.|++|++.... ........|...|++++|+|+.
T Consensus 548 ~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~h~~~v~~l~~s~~~ 596 (615)
T 1pgu_A 548 EEEIEEDLVATGSLDTNIFIYSVKRPM---KIIKALNAHKDGVNNLLWETPS 596 (615)
T ss_dssp --CCSCCEEEEEETTSCEEEEESSCTT---CCEEETTSSTTCEEEEEEEETT
T ss_pred ccccCCCEEEEEcCCCcEEEEECCCCc---eechhhhcCccceEEEEEcCCC
Confidence 799999999999999998862 1222234577899999999974
No 60
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.8e-41 Score=284.17 Aligned_cols=278 Identities=14% Similarity=0.282 Sum_probs=229.7
Q ss_pred eEEEEEccccccc----cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccC------------
Q psy7482 35 TVVLYDMVKRKQS----GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG------------ 98 (327)
Q Consensus 35 ~v~~w~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~------------ 98 (327)
...+|+....+.. ....+|...|.+++|+|+|++|++|+ ++.+++|++.+++.+..+ ..+..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l-~~~~~~~~~~~~~~~~~ 118 (393)
T 1erj_A 41 YYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARL-SDDSAANKDPENLNTSS 118 (393)
T ss_dssp CEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEE-CC---------------
T ss_pred eEEEECCCCCcccCceeEEecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEe-cCccccccccccccccc
Confidence 3457765433221 12235999999999999999999987 679999999999887776 33321
Q ss_pred -----CceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482 99 -----TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS 172 (327)
Q Consensus 99 -----~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d 172 (327)
..|.+++|+|++++|++++.|+.|++||+++++....+.. |...|.+++|+|+++++++++ |+.|++||
T Consensus 119 ~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 119 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG-----HEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp --CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-----CCCCEEEEEEcCCCCEEEEecCCCcEEEEE
Confidence 1289999999999999999999999999998877655432 344599999999999999887 99999999
Q ss_pred ecCCceeeEecCCCceeEEEeec-C-ceEEEeCCCCcEEEEEcCCCceeEEe-------eecccceEEEEEEecCCCcEE
Q psy7482 173 VEKAGVLQTLKSESKVHSVCFLN-E-TTVCTGNEESAITAYNLTDGSHLWQI-------KASASRIKGLVFFSIPQETTV 243 (327)
Q Consensus 173 ~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~~~s~~~~~l 243 (327)
+++++....+.+...+.+++|+| + .++++++.|+.|++||+++++.+..+ .+|...|.+++|+ |++++|
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~--~~g~~l 271 (393)
T 1erj_A 194 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT--RDGQSV 271 (393)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC--TTSSEE
T ss_pred CCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC--CCCCEE
Confidence 99999988888888999999999 5 78999999999999999998887766 5788999999995 999999
Q ss_pred EEecCCCeEEEEEcCCC------------ceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeee
Q psy7482 244 CTGNEESAITAYNLTDG------------SHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVS 309 (327)
Q Consensus 244 ~~~~~d~~i~i~d~~~~------------~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~ 309 (327)
++++.|+.|++||+++. .+...+.+|...|.+++|+| .+|++++.||.|++||+..+. + ...
T Consensus 272 ~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~---~-~~~ 347 (393)
T 1erj_A 272 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN---P-LLM 347 (393)
T ss_dssp EEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC---E-EEE
T ss_pred EEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe---E-EEE
Confidence 99999999999998763 34567889999999999999 899999999999999998872 2 222
Q ss_pred ecCCCCceEEEEeCCC
Q psy7482 310 ATNDGCRFTCLAIRPP 325 (327)
Q Consensus 310 ~~~~~~~i~~l~~~p~ 325 (327)
...|...|.+++|+|.
T Consensus 348 l~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 348 LQGHRNSVISVAVANG 363 (393)
T ss_dssp EECCSSCEEEEEECSS
T ss_pred ECCCCCCEEEEEecCC
Confidence 3457788999999873
No 61
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-41 Score=310.00 Aligned_cols=226 Identities=14% Similarity=0.183 Sum_probs=185.9
Q ss_pred eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482 3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (327)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 80 (327)
.+..... .||.+.|++++| ++++||+|+.||+|+||+..+.+....+. |...|.+++|+| +++|++++.|++|++
T Consensus 7 ~~~~~~~-~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~l 83 (902)
T 2oaj_A 7 SLAETNK-YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYV 83 (902)
T ss_dssp EEEEEEE-EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEE
T ss_pred eeccccc-cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEE
Confidence 3444443 589999999999 89999999999999999998777655543 788999999999 889999999999999
Q ss_pred EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeec-------cccCccccceEEEEE
Q psy7482 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL-------SSYGVGFENLDSVVW 153 (327)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~~~~~~~~~v~~~~~ 153 (327)
||+.+++.+..+ . +... |.+++|+|++++|++|+.||.|++||+++++.. .+.. .....|..+|.+++|
T Consensus 84 Wd~~~~~~~~~~-~-~~~~-V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~ 159 (902)
T 2oaj_A 84 LSLYSQKVLTTV-F-VPGK-ITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQW 159 (902)
T ss_dssp EETTTCSEEEEE-E-CSSC-EEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEE
T ss_pred EECCCCcEEEEE-c-CCCC-EEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccccCCCCeEEEEE
Confidence 999999988887 3 5555 999999999999999999999999999987653 1111 122345677999999
Q ss_pred ccCC-cEEEeec-CCeEEEEEecCCceeeEecC-------------------CCceeEEEeecC-ceEEEeCCCCcEEEE
Q psy7482 154 SPEG-LLYAIPI-QNKAVVFSVEKAGVLQTLKS-------------------ESKVHSVCFLNE-TTVCTGNEESAITAY 211 (327)
Q Consensus 154 ~~~~-~~l~~~~-~~~i~i~d~~~~~~~~~~~~-------------------~~~i~~~~~~~~-~~l~~~~~d~~i~i~ 211 (327)
+|++ ..+++++ |+.| +||+++++.+..+.. ...|.+++|+|+ .+|++++.||.|++|
T Consensus 160 sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lW 238 (902)
T 2oaj_A 160 NPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFW 238 (902)
T ss_dssp ETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred ccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEE
Confidence 9964 6777776 8999 999999998887763 367999999999 789999999999999
Q ss_pred EcCCCceeEE--e---ee-------------cccceEEEEEEe
Q psy7482 212 NLTDGSHLWQ--I---KA-------------SASRIKGLVFFS 236 (327)
Q Consensus 212 d~~~~~~~~~--~---~~-------------~~~~v~~~~~~~ 236 (327)
|+++++++.. + .. |..+|.+++|.+
T Consensus 239 d~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~ 281 (902)
T 2oaj_A 239 DANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMC 281 (902)
T ss_dssp ETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEE
T ss_pred ECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEe
Confidence 9999887653 2 11 344788888864
No 62
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.4e-41 Score=285.11 Aligned_cols=272 Identities=17% Similarity=0.246 Sum_probs=229.9
Q ss_pred EEEEEe-CCCEEEEecCCCeEEEEEccccccccccc--cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482 17 VRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (327)
Q Consensus 17 v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 93 (327)
++.|+| .+++||+|. |++|+|||..+++....+. +|...|++++|+|+|++|++|+.||.|++||+++++.+..+
T Consensus 108 ~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~- 185 (420)
T 4gga_A 108 LNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM- 185 (420)
T ss_dssp CBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-
T ss_pred ceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE-
Confidence 456888 667888776 9999999999998776554 67888999999999999999999999999999999999998
Q ss_pred ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS 172 (327)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d 172 (327)
.+|... +.++.++ +..|++|+.|+.+++||.......... +. .+...+..+.++|+++++++++ |+.+++|+
T Consensus 186 ~~h~~~-v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~-~~---~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 186 TSHSAR-VGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVAT-LS---GHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp CCCSSC-EEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEE-EE---CCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eCCCCc-eEEEeeC--CCEEEEEeCCCceeEeeecccceeeEE-ec---ccccceeeeeecCCCCeeeeeeccccceEEe
Confidence 888877 8887775 679999999999999998865443221 22 2244599999999999999987 99999999
Q ss_pred ecCCce----eeEec-CCCceeEEEeecC--ceEEE--eCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE
Q psy7482 173 VEKAGV----LQTLK-SESKVHSVCFLNE--TTVCT--GNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV 243 (327)
Q Consensus 173 ~~~~~~----~~~~~-~~~~i~~~~~~~~--~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l 243 (327)
..+++. +.... +...|.+++|+|+ ..+++ |+.|+.|++||+.+++.+..+..|. .+.++.|. ++++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~--~~~~~l 335 (420)
T 4gga_A 259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWS--PHYKEL 335 (420)
T ss_dssp SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEE--TTTTEE
T ss_pred eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc-ceeeeeec--CCCCeE
Confidence 987653 23333 7889999999997 45554 5689999999999999988887664 57888885 788877
Q ss_pred EEe--cCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 244 CTG--NEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 244 ~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
+++ +.|+.|++||+.+++++.++.+|.+.|++++|+| ++|+||+.||+|+|||+...
T Consensus 336 v~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 764 4799999999999999999999999999999999 89999999999999999765
No 63
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=7.9e-41 Score=285.07 Aligned_cols=275 Identities=17% Similarity=0.294 Sum_probs=245.9
Q ss_pred eeeccCCccEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482 8 FVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (327)
Q Consensus 8 ~~~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 87 (327)
..+.+|.+.|.+++++++++++|+.||+|++||+.+++.+..+.+|...|.+++|+ ++.+++|+.||.|++||+.+++
T Consensus 153 ~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~ 230 (445)
T 2ovr_B 153 RTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ 230 (445)
T ss_dssp EECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC
T ss_pred EEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc
Confidence 34558999999999999999999999999999999999999999999999999996 5689999999999999999999
Q ss_pred EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC
Q psy7482 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN 166 (327)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~ 166 (327)
....+ ..|... |.++.| +++++++++.||.|++||+++++....+.. +...+.++.| ++..+++++ |+
T Consensus 231 ~~~~~-~~~~~~-v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~--~~~~l~~~~~d~ 299 (445)
T 2ovr_B 231 CLHVL-MGHVAA-VRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG-----HTNRVYSLQF--DGIHVVSGSLDT 299 (445)
T ss_dssp EEEEE-ECCSSC-EEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC-----CSSCEEEEEE--CSSEEEEEETTS
T ss_pred EEEEE-cCCccc-EEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC-----CCCceEEEEE--CCCEEEEEeCCC
Confidence 98888 788877 999998 688999999999999999998887665542 2345999999 677888887 99
Q ss_pred eEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee---cccceEEEEEEecCCCcE
Q psy7482 167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA---SASRIKGLVFFSIPQETT 242 (327)
Q Consensus 167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~s~~~~~ 242 (327)
.|++||+++++.+..+. +...+.++.+++ +++++++.||.|++||+++++.+..+.. |..+|.+++| ++++
T Consensus 300 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~ 374 (445)
T 2ovr_B 300 SIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF----NKNF 374 (445)
T ss_dssp CEEEEETTTCCEEEEECCCCSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE----CSSE
T ss_pred eEEEEECCCCCEEEEEcCCcccEEEEEEeC-CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE----CCCE
Confidence 99999999999998887 778888888854 6899999999999999999999988876 8889999998 4689
Q ss_pred EEEecCCCeEEEEEcCCCceeEEe-----ecccCceEEEeeeC--cEEEEEecCCc----EEEEEccCc
Q psy7482 243 VCTGNEESAITAYNLTDGSHLWHI-----KASASRIKGLASHR--NHLICITSAGD----LVVWELNED 300 (327)
Q Consensus 243 l~~~~~d~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~--~~l~~~~~dg~----v~iw~~~~~ 300 (327)
+++|+.||.|++||+.+++.+..+ ..|.+.|++++|+| .++++|+.||+ |.+||+...
T Consensus 375 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 375 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 999999999999999999988888 47788999999999 88899999998 999999875
No 64
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.5e-41 Score=297.21 Aligned_cols=306 Identities=15% Similarity=0.207 Sum_probs=260.6
Q ss_pred eeEEEeee--eccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc----cccccccccccc-EEEEEECC--CCCeEE
Q psy7482 2 YTLTQTFV--THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR----KQSGALMQHEGT-ITCLKFTP--EGSHLI 70 (327)
Q Consensus 2 ~~~~~~~~--~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~l~ 70 (327)
+++.+.+. ...|.+.|.+++| ++++|++++ ++.|++||+.++ +....+.+|... |++++|+| ++++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~ 82 (615)
T 1pgu_A 4 ISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLC 82 (615)
T ss_dssp EEEEEEECCCCCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEE
T ss_pred cchhhccCCCCCCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEE
Confidence 45566665 3468999999999 899999998 889999999998 888999999999 99999999 999999
Q ss_pred EecCCCcEEEEEcCCC--------eEEEeEEecccCCceeeEEEecCCCEEEEEeCC----CCEEEEEcCCCceeeeeec
Q psy7482 71 SCSDDGSIAIFRVGSW--------QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVKGRSAYITNL 138 (327)
Q Consensus 71 ~~~~d~~i~iw~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~ 138 (327)
+++.||.|++||+.++ +....+ ..|... |.+++|+|++++|++++.+ +.|.+|| .++....+.
T Consensus 83 s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~- 157 (615)
T 1pgu_A 83 SGDESGKVIVWGWTFDKESNSVEVNVKSEF-QVLAGP-ISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVS- 157 (615)
T ss_dssp EEETTSEEEEEEEEEEGGGTEEEEEEEEEE-ECCSSC-EEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECC-
T ss_pred EecCCCEEEEEeCCCCcccccccccccchh-hccccc-EEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeee-
Confidence 9999999999999754 555666 667776 9999999999999999987 6888888 444433332
Q ss_pred cccCccccceEEEEEccCCc-EEEeec-CCeEEEEEecCCceeeEec-CCC---ceeEEEeecC--ceEEEeCCCCcEEE
Q psy7482 139 SSYGVGFENLDSVVWSPEGL-LYAIPI-QNKAVVFSVEKAGVLQTLK-SES---KVHSVCFLNE--TTVCTGNEESAITA 210 (327)
Q Consensus 139 ~~~~~~~~~v~~~~~~~~~~-~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~---~i~~~~~~~~--~~l~~~~~d~~i~i 210 (327)
.+...+.+++|+|++. ++++++ |+.|++||..+++.+..+. |.. .|.+++|+|+ .++++++.|+.|++
T Consensus 158 ----~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 158 ----GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISC 233 (615)
T ss_dssp ----SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred ----cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 2345699999999997 677776 9999999999999998888 777 8999999998 57889999999999
Q ss_pred EEcCCCceeEEe-e---ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc----cCceEEEeeeC-c
Q psy7482 211 YNLTDGSHLWQI-K---ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS----ASRIKGLASHR-N 281 (327)
Q Consensus 211 ~d~~~~~~~~~~-~---~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~~-~ 281 (327)
||+++++.+..+ . .|...|.+++| + ++++|++++.|+.|++||+.+++.+..+..+ ...+.++.|.. .
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~v~~~~~--~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (615)
T 1pgu_A 234 FDGKSGEFLKYIEDDQEPVQGGIFALSW--L-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG 310 (615)
T ss_dssp EETTTCCEEEECCBTTBCCCSCEEEEEE--S-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETT
T ss_pred EECCCCCEeEEecccccccCCceEEEEE--c-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCC
Confidence 999999999988 6 89999999999 5 9999999999999999999999999988877 36788888866 9
Q ss_pred EEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482 282 HLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 282 ~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~ 325 (327)
++++++.||.|++||+.... +. .....|...|++++| |+
T Consensus 311 ~l~~~~~~g~i~~~d~~~~~---~~-~~~~~~~~~v~~~~~-~~ 349 (615)
T 1pgu_A 311 RIISLSLDGTLNFYELGHDE---VL-KTISGHNKGITALTV-NP 349 (615)
T ss_dssp EEEEEETTSCEEEEETTEEE---EE-EEECCCSSCEEEEET-TT
T ss_pred eEEEEECCCCEEEEECCCCc---EE-EEEeCCCCCEEEEEe-cC
Confidence 99999999999999998762 21 122346678888888 75
No 65
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-41 Score=273.65 Aligned_cols=243 Identities=14% Similarity=0.248 Sum_probs=202.9
Q ss_pred eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccc--cccccccccccccEEEEEECCC--CCeEEEecCCCcEEEEE
Q psy7482 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVK--RKQSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAIFR 82 (327)
Q Consensus 9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~ 82 (327)
.+.+|.+.|.+++| ++++||+|+.|++|+|||+.. .+.+..+.+|.++|.+++|+|+ +++|++|+.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 45699999999999 899999999999999999974 4677889999999999999874 88999999999999999
Q ss_pred cCCCe--EEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC--
Q psy7482 83 VGSWQ--LEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE-- 156 (327)
Q Consensus 83 ~~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 156 (327)
+++++ ....+ ..|... |.+++|+|+ +.+|++++.||.|++||++++......... .|...+.+++|+|+
T Consensus 84 ~~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 84 EENGRWSQIAVH-AVHSAS-VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID---AHAIGVNSASWAPATI 158 (297)
T ss_dssp BSSSCBCCCEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE---CCSSCEEEEEECCCC-
T ss_pred cCCCceEEEEEe-ecCCCc-eeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee---cccCccceEeecCCcc
Confidence 98874 34445 567777 999999997 889999999999999999876432212222 23455999999997
Q ss_pred -----------CcEEEeec-CCeEEEEEecCCc----eeeEec-CCCceeEEEeecC----ceEEEeCCCCcEEEEEcCC
Q psy7482 157 -----------GLLYAIPI-QNKAVVFSVEKAG----VLQTLK-SESKVHSVCFLNE----TTVCTGNEESAITAYNLTD 215 (327)
Q Consensus 157 -----------~~~l~~~~-~~~i~i~d~~~~~----~~~~~~-~~~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~ 215 (327)
+++|++++ |+.|++||+++++ ....+. |...|.+++|+|+ .+|++++.|++|++||++.
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp -----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 46888887 9999999998766 455665 8899999999997 5799999999999999987
Q ss_pred Cc---eeEEe--eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482 216 GS---HLWQI--KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT 258 (327)
Q Consensus 216 ~~---~~~~~--~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~ 258 (327)
.. ....+ ..|...+.+++|+ |++++|++++.|+.|++|+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s--~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWS--LSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEEC--SSSCCEEEEETTSCEEEEEEC
T ss_pred CCCccceeeeecccCCCcEEEEEEC--CCCCEEEEEcCCCcEEEEEEC
Confidence 43 12223 4678899999995 999999999999999999976
No 66
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.8e-41 Score=319.38 Aligned_cols=311 Identities=18% Similarity=0.269 Sum_probs=257.9
Q ss_pred eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECC--CCCeEEEecCCCcEEEEE
Q psy7482 7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFR 82 (327)
Q Consensus 7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~ 82 (327)
...+.+|.+.|.+++| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.++++|+.|+.|++||
T Consensus 650 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd 729 (1249)
T 3sfz_A 650 LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 729 (1249)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEE
T ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEE
Confidence 3445689999999999 899999999999999999999999999999999999999999 556899999999999999
Q ss_pred cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccc----------------------
Q psy7482 83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSS---------------------- 140 (327)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------------------- 140 (327)
+.+++....+ .+|... |.+++|+|+++++++++.||.|++||+.+++.........
T Consensus 730 ~~~~~~~~~~-~~h~~~-v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 807 (1249)
T 3sfz_A 730 LNQKECRNTM-FGHTNS-VNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS 807 (1249)
T ss_dssp TTSSSEEEEE-CCCSSC-EEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC
T ss_pred CCCcchhhee-cCCCCC-EEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC
Confidence 9999999888 788887 9999999999999999999999999998876544332111
Q ss_pred ----------------------------cCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeE
Q psy7482 141 ----------------------------YGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHS 190 (327)
Q Consensus 141 ----------------------------~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~ 190 (327)
...+...+.+++|+|++.++++++ ++.|++||+.++..+..+. |...|.+
T Consensus 808 ~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~ 887 (1249)
T 3sfz_A 808 ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHG 887 (1249)
T ss_dssp TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEE
Confidence 012345577888888888888776 8888888888877777766 6677777
Q ss_pred EEeecC-ceEEEeCCCCcEEEEEc--------------------------------------------------------
Q psy7482 191 VCFLNE-TTVCTGNEESAITAYNL-------------------------------------------------------- 213 (327)
Q Consensus 191 ~~~~~~-~~l~~~~~d~~i~i~d~-------------------------------------------------------- 213 (327)
++|+|+ ..+++++.|+.|++||+
T Consensus 888 v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 967 (1249)
T 3sfz_A 888 VMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCC 967 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEE
Confidence 777777 56777777777777764
Q ss_pred -----------------------CCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482 214 -----------------------TDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA 270 (327)
Q Consensus 214 -----------------------~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 270 (327)
.+++....+.+|...|.+++|+ |++++|++++.||.|++||+.+++.. .+..|.
T Consensus 968 ~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s--~dg~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~ 1044 (1249)
T 3sfz_A 968 CLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFT--ADGKTLISSSEDSVIQVWNWQTGDYV-FLQAHQ 1044 (1249)
T ss_dssp EECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEEC--SSSSCEEEECSSSBEEEEETTTTEEE-CCBCCS
T ss_pred EEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEEC--CCCCEEEEEcCCCEEEEEECCCCceE-EEecCC
Confidence 3344455667788999999994 99999999999999999999998766 456789
Q ss_pred CceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 271 SRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 271 ~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
..|.+++|++ ..+++++.||.|++||+.++. ....+ ..+...|++++|+|+.
T Consensus 1045 ~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~--~~~~~~v~~~~~s~d~ 1097 (1249)
T 3sfz_A 1045 ETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR--IERDF--TCHQGTVLSCAISSDA 1097 (1249)
T ss_dssp SCEEEEEECSSSEEEEEESSSEEEEEETTTTC--CCEEE--ECCSSCCCCEEECSSS
T ss_pred CcEEEEEEcCCCcEEEEECCCcEEEEECCCCc--eeEEE--cccCCcEEEEEECCCC
Confidence 9999999999 889999999999999998883 22222 3467789999999973
No 67
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.9e-41 Score=274.47 Aligned_cols=275 Identities=18% Similarity=0.282 Sum_probs=228.3
Q ss_pred cccccccccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcCCCe-----EEEeEEecccCCceeeEEEecCCCEEEE
Q psy7482 42 VKRKQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQ-----LEKLFKKAHKGTAVNHISIHPSGKLALS 115 (327)
Q Consensus 42 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 115 (327)
++.++..++++|.+.|++++|+|+ +++|++|+.|++|++||+.+.+ +...+ .+|... |.+++|+|++++|++
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l-~~h~~~-V~~~~~s~dg~~l~s 103 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRAL-RGHSHF-VSDVVISSDGQFALS 103 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEE-CCCSSC-EEEEEECTTSSEEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEE-eCCCCC-EEEEEECCCCCEEEE
Confidence 344566789999999999999997 6899999999999999997643 34555 778877 999999999999999
Q ss_pred EeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEE
Q psy7482 116 VGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVC 192 (327)
Q Consensus 116 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~ 192 (327)
++.|+.|++|+............... .+....+++++.++++++ |+.+++||........... +...+..++
T Consensus 104 ~~~d~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~ 178 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGTTTRRFVGHTK-----DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVR 178 (340)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSS-----CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEE
T ss_pred EcccccceEEeecccceeeeecCCCC-----ceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceE
Confidence 99999999999988776555443332 388889999999998887 9999999988765544332 778899999
Q ss_pred eecC---ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc
Q psy7482 193 FLNE---TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS 269 (327)
Q Consensus 193 ~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 269 (327)
|+++ .++++++.|+.|++||+++++.+..+.+|..+|++++|+ |++++|++|+.|+.|++||+.+.+++..+..+
T Consensus 179 ~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s--~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~ 256 (340)
T 4aow_A 179 FSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS--PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 256 (340)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--TTSSEEEEEETTCEEEEEETTTTEEEEEEECS
T ss_pred EccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEEC--CCCCEEEEEeCCCeEEEEEeccCceeeeecCC
Confidence 9876 467899999999999999999999999999999999994 99999999999999999999999999888865
Q ss_pred cCceEEEeeeC-cEEEEEecCCcEEEEEccCccCC-----CceeeeecCCCCceEEEEeCCCC
Q psy7482 270 ASRIKGLASHR-NHLICITSAGDLVVWELNEDVTR-----EPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 270 ~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~-----~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
..|.+++|+| ..+++++.|+.|++||++..... .........+...|++++|+|+.
T Consensus 257 -~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg 318 (340)
T 4aow_A 257 -DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADG 318 (340)
T ss_dssp -SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTS
T ss_pred -ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCC
Confidence 4899999999 78888899999999999876200 11111223467889999999973
No 68
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5e-41 Score=270.97 Aligned_cols=246 Identities=16% Similarity=0.263 Sum_probs=205.3
Q ss_pred cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC--CeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEE
Q psy7482 48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS--WQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLR 123 (327)
Q Consensus 48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~ 123 (327)
..+.+|.+.|++++|+|+|++|++|+.|++|++||+.. .+....+ .+|.+. |.+++|++ ++++|++++.||+|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l-~gH~~~-V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTL-TGHEGP-VWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEE-ccccCC-eEEEEecCCCcCCEEEEEcCCCEEE
Confidence 35678999999999999999999999999999999974 3566777 888888 99999986 488999999999999
Q ss_pred EEEcCCCceeeeeeccccCccccceEEEEEccC--CcEEEeec-CCeEEEEEecCCce--eeEec-CCCceeEEEeecC-
Q psy7482 124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE--GLLYAIPI-QNKAVVFSVEKAGV--LQTLK-SESKVHSVCFLNE- 196 (327)
Q Consensus 124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~d~~~~~~--~~~~~-~~~~i~~~~~~~~- 196 (327)
+||+++++........ .|...|.+++|+|+ +.+|++++ |+.|++||++++.. ...+. |...+.+++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHA---VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEEBSSSCBCCCEEEC---CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC
T ss_pred EEEcCCCceEEEEEee---cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCc
Confidence 9999887533222222 23456999999997 78888887 99999999987642 23333 8889999999986
Q ss_pred -------------ceEEEeCCCCcEEEEEcCCCc----eeEEeeecccceEEEEEEecCC---CcEEEEecCCCeEEEEE
Q psy7482 197 -------------TTVCTGNEESAITAYNLTDGS----HLWQIKASASRIKGLVFFSIPQ---ETTVCTGNEESAITAYN 256 (327)
Q Consensus 197 -------------~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~s~~---~~~l~~~~~d~~i~i~d 256 (327)
.+|++|+.|+.|++||+++++ ....+.+|...|.+++|+ |+ +.+|++++.|+.|++||
T Consensus 158 ~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~s--p~~~~~~~las~s~D~~v~iWd 235 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS--PTVLLRSYMASVSQDRTCIIWT 235 (297)
T ss_dssp ------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC--CCCSSSEEEEEEETTSCEEEEE
T ss_pred ccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEEC--CCCCCceEEEEEECCCcEEEEE
Confidence 489999999999999998766 566788999999999995 77 48999999999999999
Q ss_pred cCCCc---eeEEe--ecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 257 LTDGS---HLWHI--KASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 257 ~~~~~---~~~~~--~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
+++.. ....+ ..|...|.+++|+| ++|++++.||.|++|+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred eCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 98753 22233 46788999999999 89999999999999998754
No 69
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.6e-41 Score=278.22 Aligned_cols=273 Identities=11% Similarity=0.116 Sum_probs=233.6
Q ss_pred ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc---cccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEc-
Q psy7482 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK---QSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRV- 83 (327)
Q Consensus 11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~- 83 (327)
.+|.+.|.+++| ++++|++++.||.|++||+.+++ ....+.+|...|++++|+|+++ +|++|+.||.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 489999999999 89999999999999999998876 3455568999999999999999 9999999999999999
Q ss_pred CCCeEEEeEEec--ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC---------CceeeeeeccccCccccceEEEE
Q psy7482 84 GSWQLEKLFKKA--HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK---------GRSAYITNLSSYGVGFENLDSVV 152 (327)
Q Consensus 84 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~~v~~~~ 152 (327)
.+++. ..+ .. |... |.+++|+| ++++++++.|+.|++||+++ ++....+. +...+.+++
T Consensus 88 ~~~~~-~~~-~~~~~~~~-v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~ 157 (342)
T 1yfq_A 88 GSPSF-QAL-TNNEANLG-ICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK------VKNKIFTMD 157 (342)
T ss_dssp SSSSE-EEC-BSCCCCSC-EEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS------SCCCEEEEE
T ss_pred cCCce-Eec-cccCCCCc-eEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe------eCCceEEEE
Confidence 87765 444 56 7777 99999999 99999999999999999987 55444333 234599999
Q ss_pred EccCCcEEEeecCCeEEEEEecC-Ccee---eEecCCCceeEEEeec-C-ceEEEeCCCCcEEEEEcCCC------ceeE
Q psy7482 153 WSPEGLLYAIPIQNKAVVFSVEK-AGVL---QTLKSESKVHSVCFLN-E-TTVCTGNEESAITAYNLTDG------SHLW 220 (327)
Q Consensus 153 ~~~~~~~l~~~~~~~i~i~d~~~-~~~~---~~~~~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~------~~~~ 220 (327)
|+|++ +++++.++.|++||+++ +... ....+...+.+++|+| + .++++++.||.+++|+++.. +...
T Consensus 158 ~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 158 TNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp ECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred ecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccce
Confidence 99988 44444499999999998 5432 2223788999999999 7 89999999999999999887 7778
Q ss_pred Eeeeccc---------ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc-cCceEEEeeeC-cEEEEEecC
Q psy7482 221 QIKASAS---------RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS-ASRIKGLASHR-NHLICITSA 289 (327)
Q Consensus 221 ~~~~~~~---------~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~-~~l~~~~~d 289 (327)
.+..|.. .|.+++|+ |++++|++++.||.|++||+.+++.+..+.+| ..+|.+++ .. ++|++++.|
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~~~s--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~D 313 (342)
T 1yfq_A 237 AFRCHRLNLKDTNLAYPVNSIEFS--PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA-CSDNILCLATSD 313 (342)
T ss_dssp EEECCCCCTTCCSSCCCEEEEEEC--TTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE-ECSSEEEEEEEC
T ss_pred eeecccccccccccceeEEEEEEc--CCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec-CCCCeEEEEecC
Confidence 8888865 99999995 89999999999999999999999999999998 99999999 33 999999999
Q ss_pred Cc-EEEEEc
Q psy7482 290 GD-LVVWEL 297 (327)
Q Consensus 290 g~-v~iw~~ 297 (327)
|. .+.|..
T Consensus 314 g~~~~~~~~ 322 (342)
T 1yfq_A 314 DTFKTNAAI 322 (342)
T ss_dssp THHHHCSSS
T ss_pred Ccccccccc
Confidence 99 666664
No 70
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=286.74 Aligned_cols=290 Identities=15% Similarity=0.252 Sum_probs=229.4
Q ss_pred eeEEEeeee----ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc-----------ccccccccc----------
Q psy7482 2 YTLTQTFVT----HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK-----------QSGALMQHE---------- 54 (327)
Q Consensus 2 ~~~~~~~~~----~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~-----------~~~~~~~~~---------- 54 (327)
|++.+.+.. -.|.+.|++++| ++++||+|+.||.|+|||+.+++ ....+.+|.
T Consensus 12 w~~~q~~~~~~~~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 91 (447)
T 3dw8_B 12 WCFSQVKGAVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLE 91 (447)
T ss_dssp CEEEECCSCSSSCCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEE
T ss_pred EEEEEecccccccccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccccccccccc
Confidence 455555442 236899999999 89999999999999999998876 467788898
Q ss_pred --ccEEEEEECCCC--CeEEEecCCCcEEEEEcCCCeEE---------------------------------------Ee
Q psy7482 55 --GTITCLKFTPEG--SHLISCSDDGSIAIFRVGSWQLE---------------------------------------KL 91 (327)
Q Consensus 55 --~~v~~~~~~~~~--~~l~~~~~d~~i~iw~~~~~~~~---------------------------------------~~ 91 (327)
..|++++|+|++ ..|++++.|+.|++||+.+++.. ..
T Consensus 92 ~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
T 3dw8_B 92 IEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRI 171 (447)
T ss_dssp ECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEE
T ss_pred ccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEE
Confidence 889999999998 79999999999999999764432 12
Q ss_pred EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC-Cceeeeeecc--ccCccccceEEEEEccCC-cEEEeec-CC
Q psy7482 92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK-GRSAYITNLS--SYGVGFENLDSVVWSPEG-LLYAIPI-QN 166 (327)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~--~~~~~~~~v~~~~~~~~~-~~l~~~~-~~ 166 (327)
+..+|... |.+++|+|++++|+++ .||.|++||+++ ++........ ....+...|.+++|+|++ +++++++ |+
T Consensus 172 ~~~~h~~~-v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg 249 (447)
T 3dw8_B 172 FANAHTYH-INSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG 249 (447)
T ss_dssp ECSCCSSC-CCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS
T ss_pred eccCCCcc-eEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC
Confidence 22457776 9999999999999998 799999999984 3333322111 123445679999999998 8888887 99
Q ss_pred eEEEEEecCCce----eeEec-CCC------------ceeEEEeecC-ceEEEeCCCCcEEEEEcCC-CceeEEeeeccc
Q psy7482 167 KAVVFSVEKAGV----LQTLK-SES------------KVHSVCFLNE-TTVCTGNEESAITAYNLTD-GSHLWQIKASAS 227 (327)
Q Consensus 167 ~i~i~d~~~~~~----~~~~~-~~~------------~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~ 227 (327)
.|++||+++++. ...+. +.. .|.+++|+|+ .+|++++. +.|++||+++ ++++..+..|..
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~ 328 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEY 328 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGG
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccc
Confidence 999999999886 66676 443 8999999999 77888888 9999999997 888888888864
Q ss_pred c---------------eEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec------------------------
Q psy7482 228 R---------------IKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA------------------------ 268 (327)
Q Consensus 228 ~---------------v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------------------------ 268 (327)
. +..++| +|++++|++|+.||.|++||+.+++.+. +.+
T Consensus 329 ~~~~l~~~~~~~~i~~~~~~~~--s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (447)
T 3dw8_B 329 LRSKLCSLYENDCIFDKFECCW--NGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKK 405 (447)
T ss_dssp GTTTHHHHHHTSGGGCCCCEEE--CTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCT
T ss_pred ccccccccccccccccceEEEE--CCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCccc
Confidence 2 224888 4999999999999999999999887653 222
Q ss_pred ---------ccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482 269 ---------SASRIKGLASHR--NHLICITSAGDLVVWELN 298 (327)
Q Consensus 269 ---------~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~ 298 (327)
+...|..++|+| ++||+++.++ +++|.-.
T Consensus 406 ~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 406 DEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp TCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred ccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 234688999999 8888887665 8888643
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-41 Score=307.78 Aligned_cols=304 Identities=11% Similarity=0.167 Sum_probs=229.6
Q ss_pred CCccEEEEEe--CCCEEEEecCCCeEEEEEccccccc-----------cccccccccEEEEEECCC-CCeEEEecCCCcE
Q psy7482 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS-----------GALMQHEGTITCLKFTPE-GSHLISCSDDGSI 78 (327)
Q Consensus 13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i 78 (327)
|.+.|++++| ++++|++|+.||+|++||+.+++.. ..+.+|.++|++++|+|+ +..|++|+.||.|
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v 176 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL 176 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE
Confidence 6788999999 8999999999999999999887653 345679999999999996 5789999999999
Q ss_pred EEEEcCCCeEEEeEEecc------------------cCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccc
Q psy7482 79 AIFRVGSWQLEKLFKKAH------------------KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSS 140 (327)
Q Consensus 79 ~iw~~~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 140 (327)
+||+++++....+ ..| ... |.+++|+|++++|++++.||.|++||+++++.+....+..
T Consensus 177 -lWd~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~h~~~-V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~ 253 (902)
T 2oaj_A 177 -TYSLVENEIKQSF-IYELPPFAPGGDFSEKTNEKRTPK-VIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFE 253 (902)
T ss_dssp -EEETTTTEEEEEE-CCCBCTTCCCSTTCCCTTSCBCCC-EEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSC
T ss_pred -EEECCCCceEEEE-ecccCCcCCCcccccccccccCCC-eEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecc
Confidence 9999999988877 444 344 9999999999999999999999999999887754322210
Q ss_pred ---cC----------ccccceEEEEEc----cCC-cEEEeec-C-----CeEEEEE------------------------
Q psy7482 141 ---YG----------VGFENLDSVVWS----PEG-LLYAIPI-Q-----NKAVVFS------------------------ 172 (327)
Q Consensus 141 ---~~----------~~~~~v~~~~~~----~~~-~~l~~~~-~-----~~i~i~d------------------------ 172 (327)
+. .+..+|.+++|+ |++ .++++|+ + ..+.+|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 333 (902)
T 2oaj_A 254 TEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQ 333 (902)
T ss_dssp SCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSE
T ss_pred cccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccc
Confidence 00 123358888884 332 3455443 2 1454554
Q ss_pred -----------------------------------------------ecCCceeeE-------ec-CCCceeEE------
Q psy7482 173 -----------------------------------------------VEKAGVLQT-------LK-SESKVHSV------ 191 (327)
Q Consensus 173 -----------------------------------------------~~~~~~~~~-------~~-~~~~i~~~------ 191 (327)
+.++..... +. +...|+++
T Consensus 334 ~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~ 413 (902)
T 2oaj_A 334 MKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVP 413 (902)
T ss_dssp EEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEE
T ss_pred eEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcC
Confidence 322221110 00 11334433
Q ss_pred ----------------------------EeecC-ceEEEeCCCCcEEEEEcCCCcee--EEe----e-----ecccceEE
Q psy7482 192 ----------------------------CFLNE-TTVCTGNEESAITAYNLTDGSHL--WQI----K-----ASASRIKG 231 (327)
Q Consensus 192 ----------------------------~~~~~-~~l~~~~~d~~i~i~d~~~~~~~--~~~----~-----~~~~~v~~ 231 (327)
+|+|+ +++++|+.|++|++||+.++... ..+ . +|...|.+
T Consensus 414 ~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~s 493 (902)
T 2oaj_A 414 NKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDK 493 (902)
T ss_dssp HHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEE
T ss_pred HHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeE
Confidence 44677 78999999999999999877431 111 1 78889999
Q ss_pred EEEEecCCCcEEEEecCCCeEEEEEcCCCc---------------------------------------------eeEEe
Q psy7482 232 LVFFSIPQETTVCTGNEESAITAYNLTDGS---------------------------------------------HLWHI 266 (327)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~---------------------------------------------~~~~~ 266 (327)
++|+ |++++||+|+.||+|++||+.+++ ++..+
T Consensus 494 vafs--pdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l 571 (902)
T 2oaj_A 494 ISFA--AETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAV 571 (902)
T ss_dssp EEEE--TTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEE
T ss_pred EEec--CCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEE
Confidence 9995 999999999999999999998662 46778
Q ss_pred ecccCceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCce--eeeec--CCCCceEEEEeC
Q psy7482 267 KASASRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQ--RVSAT--NDGCRFTCLAIR 323 (327)
Q Consensus 267 ~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~--~~~~~--~~~~~i~~l~~~ 323 (327)
.+|.+.|++++|+| .+||+|+.||+|++||+.... ... .+... .|...|++++|+
T Consensus 572 ~~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~~--~~~~~~~~~~~~gh~~~V~sv~Fs 631 (902)
T 2oaj_A 572 HANKGKTSAINNSNIGFVGIAYAAGSLMLIDRRGPA--IIYMENIREISGAQSACVTCIEFV 631 (902)
T ss_dssp CCCSCSEEEEEECBTSEEEEEETTSEEEEEETTTTE--EEEEEEGGGTCSSCCCCEEEEEEE
T ss_pred EcCCCcEEEEEecCCcEEEEEeCCCcEEEEECCCCe--EEEEeehhHhccccccceEEEEEE
Confidence 89999999999999 999999999999999987762 111 11112 577889999999
No 72
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.7e-41 Score=277.85 Aligned_cols=280 Identities=15% Similarity=0.179 Sum_probs=235.0
Q ss_pred eeccCCccEEEEEe--C---CCEEEEecCCCeEEEEEccc-cccc-cccccccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482 9 VTHSHTASVRSVAA--T---SKLAASSGADETVVLYDMVK-RKQS-GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF 81 (327)
Q Consensus 9 ~~~~h~~~v~~~~~--~---~~~l~~~~~dg~v~~w~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 81 (327)
.+.+|.+.|++++| + +++|++|+.||.|++||+.+ +... ..+.+|...|++++|+|++++|++++.||.|++|
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW 113 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence 44689999999999 4 58999999999999999987 4444 6788899999999999999999999999999999
Q ss_pred EcCCCeEEEeEEecccCCceeeEEE--ecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE
Q psy7482 82 RVGSWQLEKLFKKAHKGTAVNHISI--HPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL 159 (327)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 159 (327)
|+.+++.... ..|... |.+++| ++++++|++++.||.|++||+++++....+..... +.++.+.++ ..
T Consensus 114 d~~~~~~~~~--~~~~~~-v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~------~~~~~~~~~-~~ 183 (368)
T 3mmy_A 114 DLSSNQAIQI--AQHDAP-VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER------CYCADVIYP-MA 183 (368)
T ss_dssp ETTTTEEEEE--EECSSC-EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC------EEEEEEETT-EE
T ss_pred EcCCCCceee--ccccCc-eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC------ceEEEecCC-ee
Confidence 9999887764 467777 999999 88999999999999999999999988777765543 677777654 34
Q ss_pred EEeecCCeEEEEEecCCceeeEec---CCCceeEEEeecC-c----eEEEeCCCCcEEEEEcCCC---ceeEEeeeccc-
Q psy7482 160 YAIPIQNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-T----TVCTGNEESAITAYNLTDG---SHLWQIKASAS- 227 (327)
Q Consensus 160 l~~~~~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~----~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~- 227 (327)
++++.++.+.+|+++......... ......++++.++ . .+++++.||.|++||++.. +.+..+..|..
T Consensus 184 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 184 VVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp EEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred EEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecc
Confidence 444459999999998765443332 3455666666654 2 3999999999999999887 55677777776
Q ss_pred -----------ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEE
Q psy7482 228 -----------RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVV 294 (327)
Q Consensus 228 -----------~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~i 294 (327)
+|.+++|+ |++++|++++.||.|++||+.+++++..+.+|..+|++++|+| .+|++++.|+..+.
T Consensus 264 ~~~~~~~~~~~~v~~~~~s--p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~ 341 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFH--PVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKG 341 (368)
T ss_dssp ----CCCEEECCEEEEEEC--TTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred cccccccccccceEEEEEe--cCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccc
Confidence 79999995 8999999999999999999999999999999999999999999 89999999987776
Q ss_pred EEccCc
Q psy7482 295 WELNED 300 (327)
Q Consensus 295 w~~~~~ 300 (327)
|++...
T Consensus 342 ~~~~~~ 347 (368)
T 3mmy_A 342 HEFYNP 347 (368)
T ss_dssp GGGCCT
T ss_pred ccccCC
Confidence 665544
No 73
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9e-40 Score=266.26 Aligned_cols=272 Identities=16% Similarity=0.215 Sum_probs=225.4
Q ss_pred EEEEEe-CCCEEEEecCCCeEEEEEccccccccccc--cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482 17 VRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (327)
Q Consensus 17 v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 93 (327)
.++|+| .+++||+|. |++|+|||+.+++.+..+. +|...|++++|+|++++|++|+.||+|++||+++++.+..+
T Consensus 28 ~~~l~WS~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~- 105 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM- 105 (318)
T ss_dssp CBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-
T ss_pred ceEEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe-
Confidence 467899 556777765 9999999999998877664 67888999999999999999999999999999999999988
Q ss_pred ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS 172 (327)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d 172 (327)
.+|... +.++. +++..+++++.++.+++|+.......... .. .+...+..+.+.++++++++++ |+.|++||
T Consensus 106 ~~h~~~-~~~~~--~~~~~l~s~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 106 TSHSAR-VGSLS--WNSYILSSGSRSGHIHHHDVRVAEHHVAT-LS---GHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp ECCSSC-EEEEE--EETTEEEEEETTSEEEEEETTSSSCEEEE-EE---CCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cCccce-EEEee--cCCCEEEEEecCCceEeeecCCCceeEEE-Ec---CccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence 788766 66554 55779999999999999998876543222 11 2234599999999999999987 99999999
Q ss_pred ecCCceee----Ee-cCCCceeEEEeecC--ce--EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE
Q psy7482 173 VEKAGVLQ----TL-KSESKVHSVCFLNE--TT--VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV 243 (327)
Q Consensus 173 ~~~~~~~~----~~-~~~~~i~~~~~~~~--~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l 243 (327)
+++++... .. .+...+.++.++|+ .. +++++.++.|++||.+........ .+...+..+.|. +++..+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~--~~~~~~ 255 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWS--PHYKEL 255 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEE--TTTTEE
T ss_pred CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeec--ccccce
Confidence 98876332 22 26788999999987 33 356788999999999888766554 466778899996 777766
Q ss_pred EE--ecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 244 CT--GNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 244 ~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
++ |+.|+.|++||+++++++.++.+|.+.|++++|+| ++|++|+.||+|+|||+.+.
T Consensus 256 ~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 256 ISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 55 45899999999999999999999999999999999 89999999999999999765
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.3e-40 Score=276.19 Aligned_cols=283 Identities=17% Similarity=0.264 Sum_probs=233.7
Q ss_pred eeccCCccEEEEEe---CCCEEEEecCCCeEEEEEccccccccccc-------------cccccEEEEEECC-CCCeEEE
Q psy7482 9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALM-------------QHEGTITCLKFTP-EGSHLIS 71 (327)
Q Consensus 9 ~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~~l~~ 71 (327)
.+.+|.+.|++++| ++++|++|+.||.|++||+.+++....+. +|...|.+++|+| ++.+|++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence 34589999999999 67999999999999999999887665553 5999999999999 7789999
Q ss_pred ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC---CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccce
Q psy7482 72 CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS---GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENL 148 (327)
Q Consensus 72 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v 148 (327)
++.||.|++||+.+++....+ . +... +.++.+++. +.++++++.||.|++||+++++....+.. +...+
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-----~~~~v 189 (408)
T 4a11_B 118 SSFDKTLKVWDTNTLQTADVF-N-FEET-VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG-----HRQEI 189 (408)
T ss_dssp EETTSEEEEEETTTTEEEEEE-E-CSSC-EEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC-----CCSCE
T ss_pred EeCCCeEEEeeCCCCccceec-c-CCCc-eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC-----CCCcE
Confidence 999999999999999988877 3 4445 999999984 45999999999999999998877655542 23459
Q ss_pred EEEEEccCCc-EEEeec-CCeEEEEEecCCc-eeeEe----------------cCCCceeEEEeecC-ceEEEeCCCCcE
Q psy7482 149 DSVVWSPEGL-LYAIPI-QNKAVVFSVEKAG-VLQTL----------------KSESKVHSVCFLNE-TTVCTGNEESAI 208 (327)
Q Consensus 149 ~~~~~~~~~~-~l~~~~-~~~i~i~d~~~~~-~~~~~----------------~~~~~i~~~~~~~~-~~l~~~~~d~~i 208 (327)
.+++|+|++. ++++++ ||.|++||++++. ....+ .+...|.+++|+|+ .++++++.||.|
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 9999999998 577776 9999999998765 33332 26788999999999 789999999999
Q ss_pred EEEEcCCCceeEEeeeccc----ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cE
Q psy7482 209 TAYNLTDGSHLWQIKASAS----RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NH 282 (327)
Q Consensus 209 ~i~d~~~~~~~~~~~~~~~----~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~ 282 (327)
++||+++++....+..+.. ........ ...+..+++++.|+.|++||+.+++++..+.+|...|++++|+| ++
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 348 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVS-CGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQE 348 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEEC-CSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTE
T ss_pred EEEECCCCccceeccccccccccccceeEEe-cCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCE
Confidence 9999998876554432211 11112221 14566777778899999999999999999999999999999999 89
Q ss_pred EEEEecCCcEEEEEccCc
Q psy7482 283 LICITSAGDLVVWELNED 300 (327)
Q Consensus 283 l~~~~~dg~v~iw~~~~~ 300 (327)
|++++.||.|++|++...
T Consensus 349 l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 349 LYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp EEEEETTSCEEEEEECC-
T ss_pred EEEECCCCeEEEEeCCCC
Confidence 999999999999999987
No 75
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-41 Score=292.64 Aligned_cols=263 Identities=12% Similarity=0.099 Sum_probs=208.1
Q ss_pred EEecCCCeEEEEEccccccc----cccccccccEEEEEECCC------CCeEEEecCCCcEEEEEcCCCeE---------
Q psy7482 28 ASSGADETVVLYDMVKRKQS----GALMQHEGTITCLKFTPE------GSHLISCSDDGSIAIFRVGSWQL--------- 88 (327)
Q Consensus 28 ~~~~~dg~v~~w~~~~~~~~----~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~i~iw~~~~~~~--------- 88 (327)
++++.|++|+|||+.+++.. ..+..|.+.|.+++|+|+ +.+||+++.||+|++||+..++.
T Consensus 177 aS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~ 256 (524)
T 2j04_B 177 DKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE 256 (524)
T ss_dssp -----CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC
T ss_pred ccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec
Confidence 34567899999999877643 345667889999999996 57999999999999999976532
Q ss_pred --EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCcee-eeeeccccCccccceEEE--EEccCC-cEEEe
Q psy7482 89 --EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA-YITNLSSYGVGFENLDSV--VWSPEG-LLYAI 162 (327)
Q Consensus 89 --~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~ 162 (327)
...+ .+|... |.+++|++++ .|++|+.||+|++||++++... ..+. .|...|.++ .|+|++ .+|++
T Consensus 257 ~p~~~l-~~h~~~-v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~-----~H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 257 KPSLTL-SLADSL-ITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQ-----VHDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp SCSEEE-CCTTTC-EEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEE-----CSSSCEEEEEEECCTTSCCEEEE
T ss_pred CceEEE-EcCCCC-EEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEee-----cccccEEEEEEEcCCCCCeEEEE
Confidence 1244 567776 9999999864 8999999999999999876432 2222 234569999 578887 88888
Q ss_pred ec-CCeEEEEEecCCceeeEec-CC--CceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEec
Q psy7482 163 PI-QNKAVVFSVEKAGVLQTLK-SE--SKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSI 237 (327)
Q Consensus 163 ~~-~~~i~i~d~~~~~~~~~~~-~~--~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s 237 (327)
++ |++|++||+++++....+. +. ..+.+++|+|+ ..+++++.|++|++||++++..+..+.+|...|++++| +
T Consensus 329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~--S 406 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGV--S 406 (524)
T ss_dssp EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEEC--C
T ss_pred eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEe--C
Confidence 87 9999999999988766665 32 35889999998 78999999999999999999988889999999999999 4
Q ss_pred CCCcEEEEecCCCeEEEEEcCC--------------------------------------------CceeEEeecccCce
Q psy7482 238 PQETTVCTGNEESAITAYNLTD--------------------------------------------GSHLWHIKASASRI 273 (327)
Q Consensus 238 ~~~~~l~~~~~d~~i~i~d~~~--------------------------------------------~~~~~~~~~~~~~v 273 (327)
|++++|++|+.|++|++||+.. +..+..+.+|...|
T Consensus 407 p~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V 486 (524)
T 2j04_B 407 RLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINI 486 (524)
T ss_dssp SSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSC
T ss_pred CCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceE
Confidence 9999999999999999987421 11223445678899
Q ss_pred EEEeeeCc-----EEEEEecCCcEEEEEccCc
Q psy7482 274 KGLASHRN-----HLICITSAGDLVVWELNED 300 (327)
Q Consensus 274 ~~~~~~~~-----~l~~~~~dg~v~iw~~~~~ 300 (327)
.+++|+|. .+|+|+.||.|+||++...
T Consensus 487 ~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 487 TCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred EEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 99999992 8999999999999999765
No 76
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.3e-41 Score=274.35 Aligned_cols=243 Identities=16% Similarity=0.203 Sum_probs=198.3
Q ss_pred eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc--cccccccccccEEEEEECC--CCCeEEEecCCCcEEEEEc
Q psy7482 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFRV 83 (327)
Q Consensus 10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~ 83 (327)
+.+|.+.|++++| ++++||+|+.|++|+|||+.+++ .+..+.+|.++|.+++|+| ++++|++|+.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 3589999999999 89999999999999999998764 4677889999999999986 4899999999999999999
Q ss_pred CCCe--EEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC---
Q psy7482 84 GSWQ--LEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE--- 156 (327)
Q Consensus 84 ~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--- 156 (327)
++++ ....+ .+|... |.+++|+|+ +.+|++++.||.|++||++.+..... ......|...+.+++|+|+
T Consensus 89 ~~~~~~~~~~~-~~h~~~-V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 89 ENGTWEKSHEH-AGHDSS-VNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV--KKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp SSSCCCEEEEE-CCCSSC-CCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE--CCBTTSSSSCBCCCEECCCCCC
T ss_pred CCCcceEEEEc-cCCCCc-eEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce--eeeeccccCCcceEEEccccCC
Confidence 8874 44555 678777 999999997 78999999999999999987643211 1112234556899999997
Q ss_pred --------------CcEEEeec-CCeEEEEEecCC---ceeeEec-CCCceeEEEeecC-----ceEEEeCCCCcEEEEE
Q psy7482 157 --------------GLLYAIPI-QNKAVVFSVEKA---GVLQTLK-SESKVHSVCFLNE-----TTVCTGNEESAITAYN 212 (327)
Q Consensus 157 --------------~~~l~~~~-~~~i~i~d~~~~---~~~~~~~-~~~~i~~~~~~~~-----~~l~~~~~d~~i~i~d 212 (327)
+++|++++ |+.|++||++.. +....+. |...|.+++|+|+ .+|++++.|++|++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 36788887 999999999765 3455555 8889999999997 4799999999999999
Q ss_pred cCCCc----eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482 213 LTDGS----HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT 258 (327)
Q Consensus 213 ~~~~~----~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~ 258 (327)
+++.. ....+..|...|.+++|+ |++++|++++.|+.|++|+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~s--p~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWS--ITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEEC--TTTCCEEEEESSSCEEEEEEC
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEc--CCCCEEEEEcCCCeEEEEEEC
Confidence 87631 234456788999999995 999999999999999999976
No 77
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-40 Score=274.27 Aligned_cols=287 Identities=14% Similarity=0.201 Sum_probs=215.5
Q ss_pred eccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc----ccccccccccccEEEEEECC--CCCeEEEecCCCcEEEE
Q psy7482 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR----KQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIF 81 (327)
Q Consensus 10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw 81 (327)
+.+|.+.|++++| ++++||+|+.||.|++||+.++ +....+.+|...|++++|+| ++++|++++.||.|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 3589999999999 8999999999999999999876 45667788999999999999 69999999999999999
Q ss_pred EcCCC---------eEEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCCCceeeeeeccc--------cC
Q psy7482 82 RVGSW---------QLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAYITNLSS--------YG 142 (327)
Q Consensus 82 ~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--------~~ 142 (327)
|+.++ +....+ ..|... |.+++|+|+ +.+|++++.||.|++||+++++....+.... ..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTL-NDSKGS-LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred ecCCCcccccccCcceeeee-cccCCc-eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 99876 456666 677777 999999999 9999999999999999999877554332211 12
Q ss_pred ccccceEEEEEccC---CcEEEeec-CCeEEEEEecCCce--eeEec-CCCceeEEEeecC-----ceEEEeCCCCcEEE
Q psy7482 143 VGFENLDSVVWSPE---GLLYAIPI-QNKAVVFSVEKAGV--LQTLK-SESKVHSVCFLNE-----TTVCTGNEESAITA 210 (327)
Q Consensus 143 ~~~~~v~~~~~~~~---~~~l~~~~-~~~i~i~d~~~~~~--~~~~~-~~~~i~~~~~~~~-----~~l~~~~~d~~i~i 210 (327)
.+...+.+++|+|+ +.++++++ ++.+.+|+...++. +..+. |...|.+++|+|+ .++++++.||.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 34456999999997 88888887 88887777777664 44454 7889999999998 47999999999999
Q ss_pred EEcCCCceeEEeeecccceEEEEEEecCCCcEEEEe----cCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEE
Q psy7482 211 YNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG----NEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLI 284 (327)
Q Consensus 211 ~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~----~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~ 284 (327)
||++.+........+......... ++....+..+ .....+.+|+....+.+..+.+|...|++++|+| ++|+
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDN--SADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEECC-----------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred EeCCCCcCccccCCcccceeccCC--CcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence 999876554443333333333332 1333333333 3445567777777788899999999999999999 8999
Q ss_pred EEecCCcEEEEEccCc
Q psy7482 285 CITSAGDLVVWELNED 300 (327)
Q Consensus 285 ~~~~dg~v~iw~~~~~ 300 (327)
+++.||.|++|++..+
T Consensus 323 s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 323 SAGDDGKVRLWKATYS 338 (351)
T ss_dssp EEETTSCEEEEEECTT
T ss_pred EecCCCcEEEEecCcC
Confidence 9999999999999987
No 78
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.1e-41 Score=272.41 Aligned_cols=245 Identities=17% Similarity=0.273 Sum_probs=200.0
Q ss_pred ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe--EEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEE
Q psy7482 49 ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRT 124 (327)
Q Consensus 49 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i 124 (327)
.+.+|.+.|++++|+|++++|++|+.|++|++||+.+++ ....+ .+|... |.+++|++ ++++|++++.|++|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l-~gH~~~-V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL-RGHEGP-VWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEE-ECCSSC-EEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEE-cCCCcc-EEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 456899999999999999999999999999999998775 34566 788887 99999976 4889999999999999
Q ss_pred EEcCCCceeeeeeccccCccccceEEEEEccC--CcEEEeec-CCeEEEEEecCCcee---eEec-CCCceeEEEeecC-
Q psy7482 125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPE--GLLYAIPI-QNKAVVFSVEKAGVL---QTLK-SESKVHSVCFLNE- 196 (327)
Q Consensus 125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~d~~~~~~~---~~~~-~~~~i~~~~~~~~- 196 (327)
||+++++......+.. |...|.+++|+|+ +.+|++++ |+.|++||++.+... ..+. |...+.+++|+|+
T Consensus 86 Wd~~~~~~~~~~~~~~---h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 86 WREENGTWEKSHEHAG---HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp ECCSSSCCCEEEEECC---CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred EECCCCcceEEEEccC---CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence 9998875333333322 3456999999998 77888887 999999999876432 2233 7788999999986
Q ss_pred -----------------ceEEEeCCCCcEEEEEcCCC---ceeEEeeecccceEEEEEEecCCC----cEEEEecCCCeE
Q psy7482 197 -----------------TTVCTGNEESAITAYNLTDG---SHLWQIKASASRIKGLVFFSIPQE----TTVCTGNEESAI 252 (327)
Q Consensus 197 -----------------~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~~s~~~----~~l~~~~~d~~i 252 (327)
.+|++|+.|+.|++||++.. +.+..+.+|...|.+++|+ |++ .+|++++.|+.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~s--p~~~~~~~~las~s~D~~v 240 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWA--PSIGLPTSTIASCSQDGRV 240 (316)
T ss_dssp CC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECC--CCSSCSCCEEEEEETTCEE
T ss_pred CCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEec--CCCCCCCceEEEEcCCCeE
Confidence 47999999999999999755 4567788999999999995 765 899999999999
Q ss_pred EEEEcCCCc----eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 253 TAYNLTDGS----HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 253 ~i~d~~~~~----~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
++|++.+.. ....+..|...|.+++|+| ++|++++.||.|++|+....
T Consensus 241 ~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 241 FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp EEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred EEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence 999987631 2345567889999999999 89999999999999998754
No 79
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.1e-39 Score=277.78 Aligned_cols=276 Identities=16% Similarity=0.280 Sum_probs=234.0
Q ss_pred eeeccCCccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEEC--CCCCeEEEecCCCcEEEEEcC
Q psy7482 8 FVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFT--PEGSHLISCSDDGSIAIFRVG 84 (327)
Q Consensus 8 ~~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~iw~~~ 84 (327)
..+.+|.+.|.+++| .+.+|++|+.||+|++||+.+++.+..+.+|...|.+++|+ +++++|++|+.||.|++||+.
T Consensus 156 ~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~ 235 (464)
T 3v7d_B 156 LQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP 235 (464)
T ss_dssp EEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECC
T ss_pred EEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCC
Confidence 344589999999999 45599999999999999999999999999999999999998 578899999999999999998
Q ss_pred CCeE-----------------------EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc
Q psy7482 85 SWQL-----------------------EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY 141 (327)
Q Consensus 85 ~~~~-----------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 141 (327)
+++. ...+ .+|... +.++ +++++++++++.||.|++||+++++....+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~--- 308 (464)
T 3v7d_B 236 KESSVPDHGEEHDYPLVFHTPEENPYFVGVL-RGHMAS-VRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG--- 308 (464)
T ss_dssp CCCCC------CCSSEEESCGGGCTTEEEEE-CCCSSC-EEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECC---
T ss_pred CCcccccccccCCcceEeeccCCCeEEEEEc-cCccce-EEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecC---
Confidence 7653 2233 566655 7665 57789999999999999999999887665533
Q ss_pred CccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCcee
Q psy7482 142 GVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHL 219 (327)
Q Consensus 142 ~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 219 (327)
+...+.+++|+|+++++++++ |+.|++||+++++.+..+. |...+.++++++ .++++++.||.|++||+++++..
T Consensus 309 --~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 309 --HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp --CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEE
T ss_pred --CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCcee
Confidence 234599999999999999987 9999999999999999987 889999999974 79999999999999999988766
Q ss_pred EEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEE-eecccCceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482 220 WQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWH-IKASASRIKGLASHR-NHLICITSAGDLVVWEL 297 (327)
Q Consensus 220 ~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~ 297 (327)
.... +...+..+++. ++++++++++ |+.|++||+.+++.+.. +..|...|.+++|++ .++++++.||.+.+|-+
T Consensus 386 ~~~~-~~~~~~~~~~~--~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 386 FSYH-HTNLSAITTFY--VSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp EEEE-CTTCCCEEEEE--ECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred eeec-CCCCccEEEEE--eCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeEEEEEe
Confidence 5553 55667777885 8999999998 89999999999998876 678889999999999 56666667776555543
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.5e-39 Score=270.63 Aligned_cols=242 Identities=12% Similarity=0.200 Sum_probs=213.0
Q ss_pred cccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEc
Q psy7482 50 LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127 (327)
Q Consensus 50 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 127 (327)
+..|..+|++++|+|++++|++++.|+.|++||+.+++ ....+ ..|... |.+++|+|++++|++++.||.|++||+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHEL-KEHNGQ-VTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEE-ECCSSC-EEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeee-cCCCCc-ccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 34588999999999999999999999999999999887 77777 778877 999999999999999999999999999
Q ss_pred CCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce---eeEec--CCCceeEEEeecC-ceEE
Q psy7482 128 VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV---LQTLK--SESKVHSVCFLNE-TTVC 200 (327)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~---~~~~~--~~~~i~~~~~~~~-~~l~ 200 (327)
++++.........+ ...+.+++|+|+++++++++ ++.+++||++.++. ...+. |...|.+++|+|+ .+++
T Consensus 82 ~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 158 (372)
T 1k8k_C 82 KGRTWKPTLVILRI---NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA 158 (372)
T ss_dssp ETTEEEEEEECCCC---SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred CCCeeeeeEEeecC---CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE
Confidence 88876555443333 44599999999999999987 89999999998773 33332 6889999999998 7899
Q ss_pred EeCCCCcEEEEEc------------------CCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482 201 TGNEESAITAYNL------------------TDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH 262 (327)
Q Consensus 201 ~~~~d~~i~i~d~------------------~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~ 262 (327)
+++.|+.|++||+ ..++.+..+..|...+.+++|+ |++++|++++.|+.|++||++++++
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS--ANGSRVAWVSHDSTVCLADADKKMA 236 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC--SSSSEEEEEETTTEEEEEEGGGTTE
T ss_pred EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC--CCCCEEEEEeCCCEEEEEECCCCce
Confidence 9999999999995 4677888888999999999995 8999999999999999999999999
Q ss_pred eEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccC
Q psy7482 263 LWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNE 299 (327)
Q Consensus 263 ~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~ 299 (327)
+..+..|..+|.+++|+| .+++++ .||.|++|++..
T Consensus 237 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 237 VATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred eEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999999999999999 555555 999999999988
No 81
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-39 Score=266.78 Aligned_cols=265 Identities=15% Similarity=0.231 Sum_probs=231.3
Q ss_pred ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482 47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (327)
Q Consensus 47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 126 (327)
...+.+|...|++++|+|++++|++++.||.|++||+.+++....+ ..|... |.+++|+|++++|++++.||.|++||
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTL-DGHTGT-IWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhh-hhcCCc-EEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 3457889999999999999999999999999999999999999988 788887 99999999999999999999999999
Q ss_pred cCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C-----CeEEEEEecCCce-----------eeEec-CCC--
Q psy7482 127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-----NKAVVFSVEKAGV-----------LQTLK-SES-- 186 (327)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~~~~~-----------~~~~~-~~~-- 186 (327)
+.+++....+.... .+.+++|+|++++++++. + +.|.+||+..... ...+. +..
T Consensus 103 ~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (369)
T 3zwl_B 103 VSNGQCVATWKSPV------PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLD 176 (369)
T ss_dssp TTTCCEEEEEECSS------CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCC
T ss_pred CCCCcEEEEeecCC------CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcc
Confidence 99998877766333 399999999999999887 6 8999999987642 22222 333
Q ss_pred ceeEEEeecC-ceEEEeCCCCcEEEEEcCC-CceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE
Q psy7482 187 KVHSVCFLNE-TTVCTGNEESAITAYNLTD-GSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW 264 (327)
Q Consensus 187 ~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~ 264 (327)
.+.+++|+|+ .++++++.||.|++||+++ .+.+..+..|...|.+++|+ |++++|++++.|+.|++||+.+++.+.
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS--PDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC--TTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEEC--CCCCEEEEecCCceEEEEECCCCceee
Confidence 8999999999 7899999999999999998 77888899999999999995 899999999999999999999999888
Q ss_pred EeecccCceEEEeeeC--cEEEEEecCC--------------cEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 265 HIKASASRIKGLASHR--NHLICITSAG--------------DLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 265 ~~~~~~~~v~~~~~~~--~~l~~~~~dg--------------~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
.+. +...+..++|+| +++++++.++ .+++||+.... .. .....|...|++++|+|+.
T Consensus 255 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~-~~~~~~~~~v~~~~~s~~~ 327 (369)
T 3zwl_B 255 KYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE---EI-GRVQGHFGPLNTVAISPQG 327 (369)
T ss_dssp EEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC---EE-EEEECCSSCEEEEEECTTS
T ss_pred eec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc---ch-hheecccCcEEEEEECCCC
Confidence 888 677999999999 8999999888 89999998872 22 2234577889999999973
No 82
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-40 Score=281.41 Aligned_cols=271 Identities=17% Similarity=0.220 Sum_probs=219.8
Q ss_pred CCCEEEEecCCCeEEEEEcccccccccc-ccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCC---CeEEE-eEEecc
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGS---WQLEK-LFKKAH 96 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~---~~~~~-~~~~~~ 96 (327)
+++.+++++ .|+ .+++.+..+ .+|.+.|++++|+| ++++|++|+.||.|++||+.+ +.... .....|
T Consensus 38 ~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h 110 (437)
T 3gre_A 38 IQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDC 110 (437)
T ss_dssp CCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEEC
T ss_pred ccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccC
Confidence 455555544 488 457778888 88999999999999 999999999999999999976 43221 221256
Q ss_pred cCCceeeEEEecCCCEEEEEeCCCCEEEEEcC---CCceeeeeecccc-----Cc--cccceEEEE--EccCCcEEEeec
Q psy7482 97 KGTAVNHISIHPSGKLALSVGKDKTLRTWNLV---KGRSAYITNLSSY-----GV--GFENLDSVV--WSPEGLLYAIPI 164 (327)
Q Consensus 97 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~-----~~--~~~~v~~~~--~~~~~~~l~~~~ 164 (327)
... |.+++|+|++++|++++.||.|++||++ +++.......... .. +...+.++. +++++.++++++
T Consensus 111 ~~~-v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (437)
T 3gre_A 111 SST-VTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT 189 (437)
T ss_dssp SSC-EEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE
T ss_pred CCC-EEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe
Confidence 666 9999999999999999999999999995 4444332221100 00 233466666 667899999887
Q ss_pred -CCeEEEEEecCCceeeEec---CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee-ecccceEEEEEEe--
Q psy7482 165 -QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK-ASASRIKGLVFFS-- 236 (327)
Q Consensus 165 -~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~-- 236 (327)
|+.|++||+++++.+..+. |...|.+++|+|+ .++++|+.||.|++||+++++.+..+. .|..+|.++++++
T Consensus 190 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 190 NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTT
T ss_pred CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecccc
Confidence 9999999999999988887 5789999999998 789999999999999999999988886 7888999997753
Q ss_pred cCCCcEEEEecCCCeEEEEEcCCCceeEEeec--------------------------ccCceEEEeeeC-cEEEEEecC
Q psy7482 237 IPQETTVCTGNEESAITAYNLTDGSHLWHIKA--------------------------SASRIKGLASHR-NHLICITSA 289 (327)
Q Consensus 237 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------------------------~~~~v~~~~~~~-~~l~~~~~d 289 (327)
++++.+|++++.|+.|++||+++++.+..+.+ |...|++++|++ ++|++++.|
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d 349 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEAT 349 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGG
T ss_pred CCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCC
Confidence 26788999999999999999999998877764 445678888888 799999999
Q ss_pred CcEEEEEccCcc
Q psy7482 290 GDLVVWELNEDV 301 (327)
Q Consensus 290 g~v~iw~~~~~~ 301 (327)
|.|++||+..+.
T Consensus 350 ~~i~~wd~~~~~ 361 (437)
T 3gre_A 350 SSIVMFSLNELS 361 (437)
T ss_dssp TEEEEEETTCGG
T ss_pred CeEEEEECCCcc
Confidence 999999998873
No 83
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1e-39 Score=274.08 Aligned_cols=271 Identities=14% Similarity=0.188 Sum_probs=228.0
Q ss_pred ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe------EEEeEEecccCCceeeEEEecC----C---CEE
Q psy7482 47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ------LEKLFKKAHKGTAVNHISIHPS----G---KLA 113 (327)
Q Consensus 47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~~~v~~~~~~~~----~---~~l 113 (327)
...+.+|.+.|++++|+| ++|++|+.||.|++||+.+++ ....+ ..|... |.+++|+|+ + ++|
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH-FVHKSG-LHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEE-ECCTTC-EEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEE-ecCCCc-EEEEEEecccccCCccccEE
Confidence 456778999999999998 799999999999999999887 67777 678777 999999999 9 999
Q ss_pred EEEeCCCCEEEEEcCCCce-----eeeeeccccCccccceEEEEEc----cCCcE-EEeec-CCeEEEEEecC------C
Q psy7482 114 LSVGKDKTLRTWNLVKGRS-----AYITNLSSYGVGFENLDSVVWS----PEGLL-YAIPI-QNKAVVFSVEK------A 176 (327)
Q Consensus 114 ~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~----~~~~~-l~~~~-~~~i~i~d~~~------~ 176 (327)
++++.||.|++||+.+++. ...+...........|.+++|+ |++.+ +++++ |+.|++||+++ +
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 9999999999999988775 4333322100003559999999 99998 88886 99999999998 6
Q ss_pred ceee-----Eec--------CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee---c---ccceEEEEEEec
Q psy7482 177 GVLQ-----TLK--------SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA---S---ASRIKGLVFFSI 237 (327)
Q Consensus 177 ~~~~-----~~~--------~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~---~~~v~~~~~~~s 237 (327)
+.+. .+. +...+.+++|+|++.+++++.|+.|++||+++++.+..+.. | ...+.+++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~-- 242 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS-- 242 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC--
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC--
Confidence 6655 552 68899999999988888999999999999999999999998 8 9999999995
Q ss_pred CCCcEEEEecCC---CeEEEEEcCCCceeEEeec-------------ccCceEEEeeeC--cEEEEEecCCcEEEEEccC
Q psy7482 238 PQETTVCTGNEE---SAITAYNLTDGSHLWHIKA-------------SASRIKGLASHR--NHLICITSAGDLVVWELNE 299 (327)
Q Consensus 238 ~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~-------------~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~ 299 (327)
|++++|++++.| +.|++||+.+++.+..+.. |...|.+++|+| ++|++++.||.|++||+..
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 899999999999 9999999999999999998 999999999998 8999999999999999988
Q ss_pred ccCCCceeeeec----CC---------------CCceEEEEeCCC
Q psy7482 300 DVTREPQRVSAT----ND---------------GCRFTCLAIRPP 325 (327)
Q Consensus 300 ~~~~~~~~~~~~----~~---------------~~~i~~l~~~p~ 325 (327)
.. ....+... .+ ...|++++|+|+
T Consensus 323 ~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~ 365 (397)
T 1sq9_A 323 KE--RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK 365 (397)
T ss_dssp TE--EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred Cc--eeEEEecccCcccchhhhhccccccccccCCceeEEEeccc
Confidence 72 22222200 34 788999999998
No 84
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.1e-39 Score=294.06 Aligned_cols=271 Identities=13% Similarity=0.200 Sum_probs=237.7
Q ss_pred ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482 45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (327)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 124 (327)
+..+.+.+|.+.|++++|+|++++|++++.||.|++||+.+++....+ ..|... |.+++|+|++++|++++.||.|++
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~v 81 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSI-QVTETP-VRAGKFIARKNWIIVGSDDFRIRV 81 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-ECCSSC-EEEEEEEGGGTEEEEEETTSEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEE-ecCCCc-EEEEEEeCCCCEEEEEeCCCeEEE
Confidence 345678899999999999999999999999999999999999999988 788877 999999999999999999999999
Q ss_pred EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC-ceeeEec-CCCceeEEEeec-C-ceE
Q psy7482 125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA-GVLQTLK-SESKVHSVCFLN-E-TTV 199 (327)
Q Consensus 125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~-~~~~~~~-~~~~i~~~~~~~-~-~~l 199 (327)
||+.+++....+..+ ...+.+++|+|+++++++++ |+.|++||++++ .....+. |...+.+++|+| + ..+
T Consensus 82 w~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 156 (814)
T 3mkq_A 82 FNYNTGEKVVDFEAH-----PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (814)
T ss_dssp EETTTCCEEEEEECC-----SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred EECCCCcEEEEEecC-----CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEE
Confidence 999999876665432 34599999999999999887 899999999987 5555665 888999999999 5 689
Q ss_pred EEeCCCCcEEEEEcCCCceeEEeeecc-cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482 200 CTGNEESAITAYNLTDGSHLWQIKASA-SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS 278 (327)
Q Consensus 200 ~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 278 (327)
++++.||.|++||+.+++....+..+. ..+..++|++.+++.++++++.||.|++||+.+++.+..+.+|...|.+++|
T Consensus 157 ~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 236 (814)
T 3mkq_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236 (814)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 999999999999999888877776655 8899999964349999999999999999999999999999999999999999
Q ss_pred eC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 279 HR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 279 ~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
+| ++|++++.||.|++||+.+.. .. .....+..++.+++|+|+.
T Consensus 237 ~~~~~~l~~~~~dg~v~vwd~~~~~---~~-~~~~~~~~~v~~~~~~~~~ 282 (814)
T 3mkq_A 237 HPTLPIIISGSEDGTLKIWNSSTYK---VE-KTLNVGLERSWCIATHPTG 282 (814)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTCS---EE-EEECCSSSSEEEEEECTTC
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCc---EE-EEeecCCCcEEEEEEccCC
Confidence 99 899999999999999998872 21 2223456789999999973
No 85
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8.1e-40 Score=273.55 Aligned_cols=273 Identities=11% Similarity=0.110 Sum_probs=219.5
Q ss_pred ccccccccccccccEEEEEECCCC-CeEEEecCCCcEEEEEcCCCeEEEeEEe-cccCCceeeEEEec-CCCEEEEEeCC
Q psy7482 43 KRKQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGSWQLEKLFKK-AHKGTAVNHISIHP-SGKLALSVGKD 119 (327)
Q Consensus 43 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d 119 (327)
..+....+.+|...|++++|+|++ ++|++|+.||.|++||+.+++....+.. +|... |.+++|+| ++++|++++.|
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDA-ITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCB-EEEEEEETTEEEEEEEEETT
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCc-eeEEEeCCCCCCEEEEEeCC
Confidence 344456677899999999999998 8999999999999999998887777632 57776 99999999 77999999999
Q ss_pred CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-
Q psy7482 120 KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE- 196 (327)
Q Consensus 120 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~- 196 (327)
+.|++||++.. ....+.. ...+...+.+++|+|+++++++++ |+.|++||++ ++.+..+. |...|.+++|+|+
T Consensus 141 ~~i~iwd~~~~-~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~ 216 (383)
T 3ei3_B 141 GATTLRDFSGS-VIQVFAK--TDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRC 216 (383)
T ss_dssp TEEEEEETTSC-EEEEEEC--CCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSC
T ss_pred CEEEEEECCCC-ceEEEec--cCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCC
Confidence 99999999853 3333222 222345699999999999999997 9999999994 66666666 8899999999998
Q ss_pred c-eEEEeCCCCcEEEEEcCC----CceeEEeeecccceEEEEEEecC-CCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482 197 T-TVCTGNEESAITAYNLTD----GSHLWQIKASASRIKGLVFFSIP-QETTVCTGNEESAITAYNLTDGSHLWHIKASA 270 (327)
Q Consensus 197 ~-~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 270 (327)
. ++++++.|+.|++||+++ +..+..+ .|...+.+++|+ | ++++|++++.|+.|++||+++++.+..+.+|.
T Consensus 217 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s--~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 217 DWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFN--PTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp TTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEEC--TTTSCEEEEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred CCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEc--CCCCCEEEEEcCCCcEEEEECCCCcccccccccc
Confidence 4 899999999999999987 5556655 699999999995 8 99999999999999999999988777776553
Q ss_pred -----------------CceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 271 -----------------SRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 271 -----------------~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
..+..++|+| ..+ +++.||.|++||+.++. ....+....+...+.+++|+|+.
T Consensus 294 ~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~--~~~~l~~~~~~~~~~~~~~s~~g 364 (383)
T 3ei3_B 294 HRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGG--LVHQLRDPNAAGIISLNKFSPTG 364 (383)
T ss_dssp BCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCC--EEEEECBTTBCSCCCEEEECTTS
T ss_pred ccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCc--eeeeecCCCCCceEEEEEEecCc
Confidence 2333355555 222 77789999999998873 33334333356778888999974
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3e-39 Score=271.74 Aligned_cols=274 Identities=18% Similarity=0.279 Sum_probs=222.6
Q ss_pred EEEEeCCCE---EEEecCCCeEEEEEcccc----ccccccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCC---
Q psy7482 18 RSVAATSKL---AASSGADETVVLYDMVKR----KQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSW--- 86 (327)
Q Consensus 18 ~~~~~~~~~---l~~~~~dg~v~~w~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~--- 86 (327)
..++++.+. +++++.||.|+||++.+. +....+.+|.+.|++++|+| ++++|++|+.||.|++||+.++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence 345664443 335788999999998654 34456778999999999999 9999999999999999999887
Q ss_pred ----eEEEeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482 87 ----QLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA 161 (327)
Q Consensus 87 ----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 161 (327)
+....+ .+|... |.+++|+|++ .+|++++.||.|++||+++++....+.... +...+.+++|+|++++|+
T Consensus 118 ~~~~~~~~~~-~~h~~~-v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 118 LPLREPVITL-EGHTKR-VGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV---HPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp SCBCSCSEEE-ECCSSC-EEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTT---CCSCEEEEEECTTSSCEE
T ss_pred cccCCceEEe-cCCCCe-EEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCC---CCCceEEEEECCCCCEEE
Confidence 556677 788887 9999999997 699999999999999999988766552122 244599999999999999
Q ss_pred eec-CCeEEEEEecCCceeeEe-c-CCCc-eeEEEeecC-ceEEEe---CCCCcEEEEEcCCCce-eEEee-ecccceEE
Q psy7482 162 IPI-QNKAVVFSVEKAGVLQTL-K-SESK-VHSVCFLNE-TTVCTG---NEESAITAYNLTDGSH-LWQIK-ASASRIKG 231 (327)
Q Consensus 162 ~~~-~~~i~i~d~~~~~~~~~~-~-~~~~-i~~~~~~~~-~~l~~~---~~d~~i~i~d~~~~~~-~~~~~-~~~~~v~~ 231 (327)
+++ |+.|++||+++++.+..+ . +... +.++.|+|+ .++++| +.|+.|++||+++++. +.... .|...+.+
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 272 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL 272 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE
Confidence 887 999999999999998888 4 5544 899999999 667777 7999999999988664 33332 46778999
Q ss_pred EEEEecCCCcEEE-EecCCCeEEEEEcCCCce-eEEeec--ccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 232 LVFFSIPQETTVC-TGNEESAITAYNLTDGSH-LWHIKA--SASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 232 ~~~~~s~~~~~l~-~~~~d~~i~i~d~~~~~~-~~~~~~--~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
++|+ |++++|+ +++.|+.|++||+.++++ +..+.. |..+|.+++|+| .+++ +.++.+++|++..+
T Consensus 273 ~~~s--~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~--s~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 273 PFFD--PDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV--NKCEIARFYKLHER 343 (402)
T ss_dssp EEEE--TTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG--GGTEEEEEEEEETT
T ss_pred EEEc--CCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccce--ecceeEEEEEcCCC
Confidence 9995 8999886 566899999999998884 555554 458999999999 4443 46779999999876
No 87
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-38 Score=254.66 Aligned_cols=264 Identities=13% Similarity=0.145 Sum_probs=222.7
Q ss_pred ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482 45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (327)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 124 (327)
+....+.+|.+.|++++| |++++|++++.||.|++||+.+++....+ ..|... |.+++|+|++++|++++.||.+++
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVV-YTGQGF-LNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEE-EECSSC-EEEEEEETTTTEEEEEETTSCEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEe-ecCCcc-EEEEEECCCCCEEEEecCCCeEEE
Confidence 667788999999999999 99999999999999999999998888887 777777 999999999999999999999999
Q ss_pred EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeec-C-ceEE
Q psy7482 125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLN-E-TTVC 200 (327)
Q Consensus 125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~-~-~~l~ 200 (327)
|++......... .....+...+.+++| ++.++++++ |+.|++|| .++....+. +...+.++++.| + +.++
T Consensus 86 ~~~~~~~~~~~~--~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 86 VPLFATSGEDPL--YTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EETTCCTTSCC---CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEeeecCCCCcc--cchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence 998765322111 111223456999999 466777776 99999999 566666666 889999999998 5 8999
Q ss_pred EeCCCCcEEEEEcCCCceeEEeee-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeee
Q psy7482 201 TGNEESAITAYNLTDGSHLWQIKA-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASH 279 (327)
Q Consensus 201 ~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 279 (327)
+++.|+.|++|| ..+....+.. |...+.+++|. |++. +++++.|+.|++||+++++++..+.+|...|.+++|+
T Consensus 160 ~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~--~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 234 (313)
T 3odt_A 160 TASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVV--DDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLL 234 (313)
T ss_dssp EEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEE--ETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEECCCCEEEEe--cCceEEEEeccCcccEEEEEEc--CCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEe
Confidence 999999999999 4556677766 88999999996 6777 9999999999999999999999999999999999999
Q ss_pred C-cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 280 R-NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 280 ~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
| ..|++++.||.|++||+..+. .... ...+...|++++|+|+.
T Consensus 235 ~~~~l~~~~~dg~v~iwd~~~~~--~~~~--~~~~~~~i~~~~~~~~~ 278 (313)
T 3odt_A 235 PNGDIVSCGEDRTVRIWSKENGS--LKQV--ITLPAISIWSVDCMSNG 278 (313)
T ss_dssp TTSCEEEEETTSEEEEECTTTCC--EEEE--EECSSSCEEEEEECTTS
T ss_pred cCCCEEEEecCCEEEEEECCCCc--eeEE--EeccCceEEEEEEccCC
Confidence 9 689999999999999998882 2222 23456689999999973
No 88
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.7e-38 Score=284.90 Aligned_cols=243 Identities=17% Similarity=0.304 Sum_probs=209.4
Q ss_pred cccccccccEEEEEECCCC-CeEEEecCCCcEEEEEcCCC-----eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC
Q psy7482 48 GALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGSW-----QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT 121 (327)
Q Consensus 48 ~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 121 (327)
..+.+|.+.|++++|+|++ ++|++|+.|++|++|++.+. .....+ .+|... |.+++|+|++++|++|+.||.
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~-~~h~~~-v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRL-TGHSHF-VEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEE-ECCSSC-EEEEEECTTSSEEEEEETTSE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccccccccee-cCCCCc-EEEEEECCCCCEEEEEeCCCc
Confidence 4577899999999999864 78999999999999999753 344556 788888 999999999999999999999
Q ss_pred EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe----cCCCceeEEEeecC
Q psy7482 122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL----KSESKVHSVCFLNE 196 (327)
Q Consensus 122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~----~~~~~i~~~~~~~~ 196 (327)
|++||+.+++....+.. |...|.+++|+|+++++++++ |+.|++||.......... .|...|.+++|+|+
T Consensus 454 v~vwd~~~~~~~~~~~~-----h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVG-----HTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp EEEEETTTTEEEEEEEC-----CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred EEEEECCCCcceeEEeC-----CCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 99999999877655433 344599999999999999987 999999998755443332 26778999999997
Q ss_pred ---ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCce
Q psy7482 197 ---TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRI 273 (327)
Q Consensus 197 ---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v 273 (327)
..+++++.|+.|++||+++++....+.+|...|++++|+ |++++|++++.|+.|++||+.+++.+..+..+ ..|
T Consensus 529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s--pdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v 605 (694)
T 3dm0_A 529 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS--PDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVI 605 (694)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCE
T ss_pred CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe--CCCCEEEEEeCCCeEEEEECCCCceEEEecCC-CcE
Confidence 379999999999999999999999999999999999995 99999999999999999999999988887754 589
Q ss_pred EEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482 274 KGLASHR-NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 274 ~~~~~~~-~~l~~~~~dg~v~iw~~~~~ 300 (327)
.+++|+| ..+++++.|+.|++||+...
T Consensus 606 ~~~~~sp~~~~l~~~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 606 HALCFSPNRYWLCAATEHGIKIWDLESK 633 (694)
T ss_dssp EEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred EEEEEcCCCcEEEEEcCCCEEEEECCCC
Confidence 9999999 55556666788999999887
No 89
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-39 Score=266.58 Aligned_cols=250 Identities=17% Similarity=0.271 Sum_probs=209.0
Q ss_pred cccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC--CCeEEEeEEecccCCceeeEEEecC--CCEEEEEeCC
Q psy7482 44 RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG--SWQLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKD 119 (327)
Q Consensus 44 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d 119 (327)
|+++..+.+|...|++++|+|++++|++|+.||.|++||+. +++....+ ..|... |.+++|+++ +++|++++.|
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-TGHEGP-VWRVDWAHPKFGTILASCSYD 78 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSC-EEEEEECCGGGCSEEEEEETT
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEe-cCCCCc-EEEEEeCCCCCCCEEEEeccC
Confidence 35667888999999999999999999999999999999998 55666666 778877 999999976 8999999999
Q ss_pred CCEEEEEcCCCceeeeeeccccCccccceEEEEEccC--CcEEEeec-CCeEEEEEecCCceee--Ee-cCCCceeEEEe
Q psy7482 120 KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE--GLLYAIPI-QNKAVVFSVEKAGVLQ--TL-KSESKVHSVCF 193 (327)
Q Consensus 120 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~d~~~~~~~~--~~-~~~~~i~~~~~ 193 (327)
|.|++||+++++.........+ ...+.+++|+|+ +.++++++ |+.|++||++++.... .+ .+...|.+++|
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVH---SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCC---SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred CEEEEEEcCCCceeEeeeecCC---CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 9999999998874333333322 445999999999 88888887 9999999998874332 33 38889999999
Q ss_pred ec-------------C-ceEEEeCCCCcEEEEEcCCCc----eeEEeeecccceEEEEEEecCC---CcEEEEecCCCeE
Q psy7482 194 LN-------------E-TTVCTGNEESAITAYNLTDGS----HLWQIKASASRIKGLVFFSIPQ---ETTVCTGNEESAI 252 (327)
Q Consensus 194 ~~-------------~-~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~s~~---~~~l~~~~~d~~i 252 (327)
+| + .++++++.|+.|++||+++++ ....+.+|...|.+++|+ |+ +++|++++.||.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~s--p~~~~~~~l~s~~~dg~i 233 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS--PTVLLRSYLASVSQDRTC 233 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC--CCCSSSEEEEEEETTSCE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEEC--CCCCCCCeEEEEeCCCEE
Confidence 99 5 789999999999999998765 345677899999999995 88 8999999999999
Q ss_pred EEEEcCCCc-----eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 253 TAYNLTDGS-----HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 253 ~i~d~~~~~-----~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
++||+.++. .+.....|...|.+++|+| ++|++++.||.|++|++...
T Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 234 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred EEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 999999874 2223334888999999999 89999999999999999854
No 90
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-38 Score=265.13 Aligned_cols=246 Identities=15% Similarity=0.246 Sum_probs=208.6
Q ss_pred eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEcc--ccccccccccccccEEEEEECCC--CCeEEEecCCCcEEEEE
Q psy7482 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAIFR 82 (327)
Q Consensus 9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~ 82 (327)
.+.+|.+.|++++| ++++||+|+.||.|++||+. +++....+.+|...|++++|+|+ +++|++++.||.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 34589999999999 89999999999999999998 66778889999999999999987 89999999999999999
Q ss_pred cCCCe--EEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc---
Q psy7482 83 VGSWQ--LEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP--- 155 (327)
Q Consensus 83 ~~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--- 155 (327)
+.+++ ....+ ..|... |.+++|+|+ +.+|++++.||.|++||++++..........+ ...+.+++|+|
T Consensus 86 ~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 86 EENGRWSQIAVH-AVHSAS-VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH---AIGVNSASWAPATI 160 (379)
T ss_dssp EETTEEEEEEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC---TTCEEEEEECCCC-
T ss_pred cCCCceeEeeee-cCCCcc-eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC---CCceEEEEEcCccc
Confidence 99887 55555 567776 999999998 99999999999999999998755444333332 45599999999
Q ss_pred ----------CCcEEEeec-CCeEEEEEecCCce----eeEec-CCCceeEEEeecC----ceEEEeCCCCcEEEEEcCC
Q psy7482 156 ----------EGLLYAIPI-QNKAVVFSVEKAGV----LQTLK-SESKVHSVCFLNE----TTVCTGNEESAITAYNLTD 215 (327)
Q Consensus 156 ----------~~~~l~~~~-~~~i~i~d~~~~~~----~~~~~-~~~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~ 215 (327)
++.++++++ |+.|++||+++++. ...+. |...|.+++|+|+ .++++++.||.|++||+++
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 688888887 99999999987653 34444 7889999999997 5788999999999999988
Q ss_pred Cce-----eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482 216 GSH-----LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS 261 (327)
Q Consensus 216 ~~~-----~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~ 261 (327)
+.. +.....|...+.+++|+ |++++|++++.||.|++|++..+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~s--~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDVLWRASWS--LSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEEC--SSSCCEEEEESSSSEEEEEEEETT
T ss_pred CCccceeeeeccccCCCcEEEEEEc--CCCCEEEEecCCCcEEEEeCCCCC
Confidence 642 22234488899999995 999999999999999999998654
No 91
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.2e-38 Score=266.95 Aligned_cols=262 Identities=17% Similarity=0.268 Sum_probs=218.5
Q ss_pred eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482 3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (327)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 80 (327)
++.+.+.+++|...|++++| +|++||+|+.||+|++||+.+++.+..+.+|...+.++.++ +..|++|+.|+.+++
T Consensus 136 ~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~ 213 (420)
T 4gga_A 136 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHH 213 (420)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEE
T ss_pred CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeE
Confidence 35667788899999999999 89999999999999999999999999999999999998875 679999999999999
Q ss_pred EEcCCCe-EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-
Q psy7482 81 FRVGSWQ-LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL- 158 (327)
Q Consensus 81 w~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 158 (327)
||..... ....+ .+|... +..+.|+|+++++++++.|+.+++|+..+++..... ......+...|.+++|+|.+.
T Consensus 214 ~d~~~~~~~~~~~-~~h~~~-~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~-~~~~~~~~~~V~~~~~~p~~~~ 290 (420)
T 4gga_A 214 HDVRVAEHHVATL-SGHSQE-VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP-LQTFTQHQGAVKAVAWCPWQSN 290 (420)
T ss_dssp EETTSSSCEEEEE-ECCSSC-EEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCC-SEEECCCSSCEEEEEECTTCTT
T ss_pred eeecccceeeEEe-cccccc-eeeeeecCCCCeeeeeeccccceEEeecccccccee-eeeecccCCceeeeeeCCCccc
Confidence 9997654 44555 788887 999999999999999999999999999877543211 111223345699999999664
Q ss_pred EEEee--c-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEe--CCCCcEEEEEcCCCceeEEeeecccceEEE
Q psy7482 159 LYAIP--I-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTG--NEESAITAYNLTDGSHLWQIKASASRIKGL 232 (327)
Q Consensus 159 ~l~~~--~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~ 232 (327)
+++++ + |+.|++||+.+++....+.....+.++.|+|+ +.++++ +.|+.|++||+.+++++.++.+|...|+++
T Consensus 291 ~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l 370 (420)
T 4gga_A 291 VLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL 370 (420)
T ss_dssp EEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 55543 3 89999999999999999998889999999998 666554 479999999999999999999999999999
Q ss_pred EEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC
Q psy7482 233 VFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS 271 (327)
Q Consensus 233 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 271 (327)
+|+ |+|++|++|+.|++|++||+.+..+....+.+..
T Consensus 371 ~~s--pdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~ 407 (420)
T 4gga_A 371 TMS--PDGATVASAAADETLRLWRCFELDPARRREREKA 407 (420)
T ss_dssp EEC--TTSSCEEEEETTTEEEEECCSCSSCC--------
T ss_pred EEc--CCCCEEEEEecCCeEEEEECCCCCccchhhhccC
Confidence 994 9999999999999999999988766665555443
No 92
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=271.69 Aligned_cols=244 Identities=11% Similarity=0.138 Sum_probs=201.9
Q ss_pred cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe-----------EEEeEEeccc------------CCceeeEEEec
Q psy7482 52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ-----------LEKLFKKAHK------------GTAVNHISIHP 108 (327)
Q Consensus 52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-----------~~~~~~~~~~------------~~~v~~~~~~~ 108 (327)
.+.+.|++++|+|++++|++|+.||.|++||+.+++ ....+ .+|. .. |.+++|+|
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~-V~~l~~~~ 103 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTF-QSHEPEFDYLKSLEIEEK-INKIRWLP 103 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEE-ECCCCEEEGGGTEEECCC-CCEEEECC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccc-ccccccccccccccccCc-eEEEEEcC
Confidence 367899999999999999999999999999998776 46666 6776 66 99999999
Q ss_pred CC--CEEEEEeCCCCEEEEEcCCCceeeee-------------------e----------------ccccCccccceEEE
Q psy7482 109 SG--KLALSVGKDKTLRTWNLVKGRSAYIT-------------------N----------------LSSYGVGFENLDSV 151 (327)
Q Consensus 109 ~~--~~l~~~~~dg~i~iwd~~~~~~~~~~-------------------~----------------~~~~~~~~~~v~~~ 151 (327)
++ ..|++++.||.|++||+.+++..... . ......|...|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 98 79999999999999999765432100 0 00012356679999
Q ss_pred EEccCCcEEEeecCCeEEEEEecC-CceeeEe--------cCCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCce--
Q psy7482 152 VWSPEGLLYAIPIQNKAVVFSVEK-AGVLQTL--------KSESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSH-- 218 (327)
Q Consensus 152 ~~~~~~~~l~~~~~~~i~i~d~~~-~~~~~~~--------~~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~-- 218 (327)
+|+|++++|+++.|+.|++||+++ ++....+ .|...|.+++|+|+ .++++++.||.|++||+++++.
T Consensus 184 ~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 184 SINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp EECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred EEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 999999999998899999999984 4444432 37889999999997 5899999999999999999886
Q ss_pred --eEEeeeccc------------ceEEEEEEecCCCcEEEEecCCCeEEEEEcCC-CceeEEeecccCc-----------
Q psy7482 219 --LWQIKASAS------------RIKGLVFFSIPQETTVCTGNEESAITAYNLTD-GSHLWHIKASASR----------- 272 (327)
Q Consensus 219 --~~~~~~~~~------------~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~----------- 272 (327)
+..+..|.. .|.+++|+ |++++|++++. +.|++||+++ ++++..+.+|...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFS--HSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND 340 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEEC--TTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred ceeeEeccCCCccccccccccCceEEEEEEC--CCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence 678888876 89999995 99999999999 9999999997 8888888888642
Q ss_pred ----eEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 273 ----IKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 273 ----v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
+..++|+| ++|++++.||.|++||+..+
T Consensus 341 ~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 341 CIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp GGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 23489999 89999999999999999887
No 93
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=261.33 Aligned_cols=269 Identities=13% Similarity=0.176 Sum_probs=216.7
Q ss_pred ccccccccEEEEEECCCCCeE-EEecC---CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC---CCEEEEEeCCCC
Q psy7482 49 ALMQHEGTITCLKFTPEGSHL-ISCSD---DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS---GKLALSVGKDKT 121 (327)
Q Consensus 49 ~~~~~~~~v~~~~~~~~~~~l-~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~ 121 (327)
.+.+|...|.+++|+|++..+ ++|+. |+.|++||+.+++........|... |.+++|+|+ +++|++++.||.
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKP-IKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSC-EEEEECTTCCTTTCCEEEEETTSC
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCc-EEEEEEcCCCCCCceEEEecCCCe
Confidence 456799999999999998655 56665 8999999999988776664567766 999999998 699999999999
Q ss_pred EEEEEcCCCc-eeeeeeccccCccccceEEEE------EccCCcEEEeec-CCeEEEEEecCCc-eeeEec-C----CCc
Q psy7482 122 LRTWNLVKGR-SAYITNLSSYGVGFENLDSVV------WSPEGLLYAIPI-QNKAVVFSVEKAG-VLQTLK-S----ESK 187 (327)
Q Consensus 122 i~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~-~~~i~i~d~~~~~-~~~~~~-~----~~~ 187 (327)
|++||+.+++ ....+. .+...+.++. |+|+++++++++ |+.|++||+++++ .+..+. + ...
T Consensus 92 i~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVK-----GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD 166 (357)
T ss_dssp EEEECTTSCSSCSEEEC-----CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred EEEEeCCCCCccEEEEE-----ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence 9999999877 444433 2344588985 578899999887 9999999999887 666665 2 337
Q ss_pred eeEEE----eecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecC---CCcEEEEecCCCeEEEEEcCC
Q psy7482 188 VHSVC----FLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIP---QETTVCTGNEESAITAYNLTD 259 (327)
Q Consensus 188 i~~~~----~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~---~~~~l~~~~~d~~i~i~d~~~ 259 (327)
+.+++ |+|+ .++++++.|+.|++||+++++... ...|...+.+++|+ | ++.++++++.||.|++||+++
T Consensus 167 v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~--~~~~~~~~l~~~~~dg~i~i~d~~~ 243 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFD--RKDISMNKLVATSLEGKFHVFDMRT 243 (357)
T ss_dssp EEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEES--CSSSSCCEEEEEESTTEEEEEEEEE
T ss_pred eEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcC--CCCCCCCEEEEECCCCeEEEEeCcC
Confidence 88888 6677 789999999999999999987744 46688899999995 7 899999999999999999988
Q ss_pred CceeEEee-----cccCceEEEeeeC--c-EEEEEecCCcEEEEEccCccCCC---------------ceeeeecCCCCc
Q psy7482 260 GSHLWHIK-----ASASRIKGLASHR--N-HLICITSAGDLVVWELNEDVTRE---------------PQRVSATNDGCR 316 (327)
Q Consensus 260 ~~~~~~~~-----~~~~~v~~~~~~~--~-~l~~~~~dg~v~iw~~~~~~~~~---------------~~~~~~~~~~~~ 316 (327)
++.+..+. +|...|++++|+| + +|++++.||.|++||+....... ........|...
T Consensus 244 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (357)
T 3i2n_A 244 QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQP 323 (357)
T ss_dssp EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSC
T ss_pred CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCC
Confidence 77655444 8999999999999 4 89999999999999998763110 112223457788
Q ss_pred eEEEEeCCCC
Q psy7482 317 FTCLAIRPPV 326 (327)
Q Consensus 317 i~~l~~~p~~ 326 (327)
|++++|+|+.
T Consensus 324 v~~~~~s~~~ 333 (357)
T 3i2n_A 324 ISSLDWSPDK 333 (357)
T ss_dssp EEEEEECSSS
T ss_pred eeEEEEcCCC
Confidence 9999999973
No 94
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7e-39 Score=272.12 Aligned_cols=267 Identities=13% Similarity=0.126 Sum_probs=208.4
Q ss_pred ccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCCeEEEeEE-ecccCCceeeEEEec-CCCEEEEEeCCCCEEEE
Q psy7482 49 ALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFK-KAHKGTAVNHISIHP-SGKLALSVGKDKTLRTW 125 (327)
Q Consensus 49 ~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw 125 (327)
....|...|++|+|+| ++++||+|+.||.|+|||+.+++....+. .+|.+. |++++|+| ++++|++++.||+|++|
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~-V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGS-ITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCC-CCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCC-EEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 3456888999999999 56799999999999999998776544331 567777 99999998 78999999999999999
Q ss_pred EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC--ceEEE
Q psy7482 126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE--TTVCT 201 (327)
Q Consensus 126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~--~~l~~ 201 (327)
|++++......... .....+.+++|+|+++++++|+ ||.|++||++.. .+..+. |...|.+++|+|+ .++++
T Consensus 193 d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 193 DFKGNILRVFASSD---TINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp ETTSCEEEEEECCS---SCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred eccCCceeEEeccC---CCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEE
Confidence 99865443322222 2233478999999999999997 999999998754 445555 8899999999997 47889
Q ss_pred eCCCCcEEEEEcCCCceeEE---eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC------c
Q psy7482 202 GNEESAITAYNLTDGSHLWQ---IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS------R 272 (327)
Q Consensus 202 ~~~d~~i~i~d~~~~~~~~~---~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~ 272 (327)
++.|+.|++||+++.+.... ..+|..+|++++|+ |++.+|++++.|+.|++||+.+++....+..|.. .
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~s--pdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 346 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS--PDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLT 346 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBC--TTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSC
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeEC--CCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccce
Confidence 99999999999988765433 36799999999994 9999999999999999999999988877776642 2
Q ss_pred eEEEeeeC--cEEEEEe------------cCCcEEEEEccCccCCCceeeeecCCCCceEEE-EeCCC
Q psy7482 273 IKGLASHR--NHLICIT------------SAGDLVVWELNEDVTREPQRVSATNDGCRFTCL-AIRPP 325 (327)
Q Consensus 273 v~~~~~~~--~~l~~~~------------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l-~~~p~ 325 (327)
+....|+| ..+++++ .++.|++||..++ .........+...|.++ +|+|+
T Consensus 347 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g---~~~~~l~~~~~~~v~s~~~fspd 411 (435)
T 4e54_B 347 PIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG---KMMCQLYDPESSGISSLNEFNPM 411 (435)
T ss_dssp CCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC---CEEEEECCSSCCCCCCEEEECTT
T ss_pred eEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC---cEEEEEeCCCCCcEEEEEEECCC
Confidence 33455666 5555543 3457999999888 23222233566778887 69987
No 95
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.9e-38 Score=262.22 Aligned_cols=266 Identities=10% Similarity=0.121 Sum_probs=220.3
Q ss_pred cccccccEEEEEECCC----CCeEEEecCCCcEEEEEcCCCeEEEeEEec-----ccCCceeeEEEecC----CCEEEEE
Q psy7482 50 LMQHEGTITCLKFTPE----GSHLISCSDDGSIAIFRVGSWQLEKLFKKA-----HKGTAVNHISIHPS----GKLALSV 116 (327)
Q Consensus 50 ~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~----~~~l~~~ 116 (327)
..+|..+|++++|+|+ ...+++++.++.|++||+.+++.+..+ .. |... |.+++|+|+ +++|+++
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~-~~~~~~~~~~~-v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLL-QSYVDADADEN-FYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEE-EEEECSCTTCC-EEEEEEEECTTTCCEEEEEE
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEee-eeccccCCCCc-EEEEEeccCCCCCCCEEEEe
Confidence 3479999999999984 456677777779999999988776666 32 3344 999999998 6799999
Q ss_pred eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCcEEEeec-CCeEEEEEecCCceeeEe----cCCCceeE
Q psy7482 117 GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKAGVLQTL----KSESKVHS 190 (327)
Q Consensus 117 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~----~~~~~i~~ 190 (327)
+.||.|++||+.+++....+..+ ...|.+++|+| +++++++++ |+.|++||+++++.+..+ .+...|.+
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGH-----GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESC-----CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred cCCCEEEEEEchhceEeeeecCC-----CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence 99999999999998876665422 34599999999 889999887 999999999999998887 38899999
Q ss_pred EEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee----------------------------cccceEEEEEEecCCCc
Q psy7482 191 VCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA----------------------------SASRIKGLVFFSIPQET 241 (327)
Q Consensus 191 ~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~----------------------------~~~~v~~~~~~~s~~~~ 241 (327)
++|+|+ .++++++.||.|++||+++++.+..+.. |...|.+++|. ++
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~ 242 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL----GD 242 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE----TT
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc----CC
Confidence 999998 7999999999999999998765544433 88999999993 77
Q ss_pred EEEEecCCCeEEEEEcCCCce--------------eEEeecccCceEEEeeeC----cEEEEEecCCcEEEEEccCccCC
Q psy7482 242 TVCTGNEESAITAYNLTDGSH--------------LWHIKASASRIKGLASHR----NHLICITSAGDLVVWELNEDVTR 303 (327)
Q Consensus 242 ~l~~~~~d~~i~i~d~~~~~~--------------~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~v~iw~~~~~~~~ 303 (327)
++++++.|+.|++||+.+++. +..+..|...|++++|+| ++|++++.||.|++||+..+...
T Consensus 243 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 243 LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence 999999999999999988754 788889999999999987 69999999999999999987311
Q ss_pred Cce--eeeecCCCCceEEEEeCCCC
Q psy7482 304 EPQ--RVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 304 ~~~--~~~~~~~~~~i~~l~~~p~~ 326 (327)
... .+....+...|++++|+|+.
T Consensus 323 ~~~~~~~~~~~~~~~v~~~~~s~~~ 347 (366)
T 3k26_A 323 KAKCTTLTHHKCGAAIRQTSFSRDS 347 (366)
T ss_dssp GCEEEEECCTTCCSCEEEEEECTTS
T ss_pred cccceEEcccccCCceEEEEeCCCC
Confidence 112 22222236899999999974
No 96
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-39 Score=272.29 Aligned_cols=239 Identities=12% Similarity=0.120 Sum_probs=194.4
Q ss_pred ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC--eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcC
Q psy7482 51 MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW--QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (327)
Q Consensus 51 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 128 (327)
..+.++|++++|+|++++|++|+.|+.|++||+.++ +....+ .+|... |.+++|+|++++|++++.||.|++||+.
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~h~~~-v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTF-SDHDKI-VTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCB-CCCSSC-EEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEE-ecCCce-EEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 346778999999999999999999999999999988 666777 778887 9999999999999999999999999999
Q ss_pred CCc-eeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce---eeEec--CCCceeEEEeecC-ceEE
Q psy7482 129 KGR-SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV---LQTLK--SESKVHSVCFLNE-TTVC 200 (327)
Q Consensus 129 ~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~---~~~~~--~~~~i~~~~~~~~-~~l~ 200 (327)
+++ ......... +...+.+++|+|++++|++++ |+.|++||+++++. ...+. |...|.+++|+|+ .+++
T Consensus 86 ~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 86 PDGTWKQTLVLLR---LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp ---CCCCEEECCC---CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred CCCceeeeeEecc---cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 876 222222222 345699999999999999887 99999999998873 55555 7899999999999 7899
Q ss_pred EeCCCCcEEEEEcC------------------CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482 201 TGNEESAITAYNLT------------------DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH 262 (327)
Q Consensus 201 ~~~~d~~i~i~d~~------------------~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~ 262 (327)
+++.|+.|++||++ .++.+..+ .|...|.+++|+ |++++|++++.|+.|++||+.+++.
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s--p~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFS--PSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEEC--TTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEEC--CCCCEEEEEeCCCcEEEEECCCCCC
Confidence 99999999999985 24456666 899999999994 9999999999999999999999987
Q ss_pred ----eEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482 263 ----LWHIKASASRIKGLASHR--NHLICITSAGDLVVWELN 298 (327)
Q Consensus 263 ----~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~ 298 (327)
+..+.+|..+|.+++|+| ++|++++.++ +.+|+..
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-~~~~~~~ 280 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWANESAIVAAGYNYS-PILLQGN 280 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEETTEEEEEESSSS-EEEECCC
T ss_pred cceeeEeecCCCCceEEEEEcCCCCEEEEEcCCc-EEEEEeC
Confidence 888999999999999999 7777776555 5577765
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.8e-37 Score=259.58 Aligned_cols=245 Identities=16% Similarity=0.257 Sum_probs=209.5
Q ss_pred cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC-CCeE
Q psy7482 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG-SWQL 88 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~~ 88 (327)
.|...|.+++| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ +++|++++.||.|++||++ ....
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQ 209 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcce
Confidence 48999999999 89999999999999999999999999999999999999994 6799999999999999998 4555
Q ss_pred EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC-cEEEeec---
Q psy7482 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-LLYAIPI--- 164 (327)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--- 164 (327)
...+ ..|... |.+++|+|++++|++++.||.|++||+++++....+.. +...+.+++|+|++ .++++++
T Consensus 210 ~~~~-~~~~~~-v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 210 IGTL-QGHSSE-VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN-----HNAAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp EEEE-ECCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC-----CSSCCCEEEECTTSTTEEEEECCTT
T ss_pred eeEE-cCCCCC-eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC-----CcceEEEEEECCCCCCEEEEecCCC
Confidence 6666 778887 99999999999999999999999999998877655432 23459999999976 5666653
Q ss_pred CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEE--eCCCCcEEEEEcCCCceeE--EeeecccceEEEEEEecCC
Q psy7482 165 QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCT--GNEESAITAYNLTDGSHLW--QIKASASRIKGLVFFSIPQ 239 (327)
Q Consensus 165 ~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~--~~~d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~s~~ 239 (327)
|+.|++||+++++.+..+.+...+.+++|+|+ ..+++ |+.||.|++||+.+++... .+.+|...|.+++|+ |+
T Consensus 283 d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s--~d 360 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS--PD 360 (401)
T ss_dssp TCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEEC--TT
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEEC--CC
Confidence 89999999999999999998899999999998 67777 6689999999999865544 467899999999995 99
Q ss_pred CcEEEEecCCCeEEEEEcCCCceeEEee
Q psy7482 240 ETTVCTGNEESAITAYNLTDGSHLWHIK 267 (327)
Q Consensus 240 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 267 (327)
+++|++++.||.|++||+.+++.+....
T Consensus 361 g~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 361 GRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp SSEEEEECTTSEEEEEECCC--------
T ss_pred CCEEEEEeCCCcEEEEECCCCccccccc
Confidence 9999999999999999999988765543
No 98
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-39 Score=276.31 Aligned_cols=260 Identities=12% Similarity=0.081 Sum_probs=194.8
Q ss_pred CCccEEEEEe--CC---------CEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482 13 HTASVRSVAA--TS---------KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF 81 (327)
Q Consensus 13 h~~~v~~~~~--~~---------~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 81 (327)
+.+.|.+|+| ++ ++||+|+.++.. -..+|+++.|++++.|++|+||
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~-----------------------~~~~~~~~~laS~s~D~tI~iW 188 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD-----------------------EPLNEHLEMFDKEKHSSCIQIF 188 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC-----------------------------------------CEEEEEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccC-----------------------CccchhhhhhccCCCCceEEEE
Confidence 5778999999 44 788888866420 0136899999999999999999
Q ss_pred EcCCCeEE----EeEEecccCCceeeEEEecC------CCEEEEEeCCCCEEEEEcCCCceee--eee----ccccCccc
Q psy7482 82 RVGSWQLE----KLFKKAHKGTAVNHISIHPS------GKLALSVGKDKTLRTWNLVKGRSAY--ITN----LSSYGVGF 145 (327)
Q Consensus 82 ~~~~~~~~----~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~~~--~~~----~~~~~~~~ 145 (327)
|+.+++.. ..+ ..|.+. |.+++|+|+ +.+|++++.||+|++||+.+++... ... ......+.
T Consensus 189 d~~~~~~~~~~~~~l-~~~~~~-V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~ 266 (524)
T 2j04_B 189 KMNTSTLHCVKVQTI-VHSFGE-VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD 266 (524)
T ss_dssp EEETTTCCEEEEEEE-EECCCS-EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT
T ss_pred EccCCCCCceEEEEE-EecCCc-EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCC
Confidence 99876642 223 445566 999999996 5799999999999999998764321 000 00112345
Q ss_pred cceEEEEEccCCcEEEeec-CCeEEEEEecCCc-eeeEec-CCCceeEE--EeecC--ceEEEeCCCCcEEEEEcCCCce
Q psy7482 146 ENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAG-VLQTLK-SESKVHSV--CFLNE--TTVCTGNEESAITAYNLTDGSH 218 (327)
Q Consensus 146 ~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~-~~~~~~-~~~~i~~~--~~~~~--~~l~~~~~d~~i~i~d~~~~~~ 218 (327)
..+.+++|+|++ .|++|+ ||+|++||+++++ +...+. |...|.++ +|+|+ .+|++++.|++|++||+++++.
T Consensus 267 ~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 267 SLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT 345 (524)
T ss_dssp TCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH
T ss_pred CCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc
Confidence 679999999875 677776 9999999999764 444455 88999999 56776 4789999999999999999888
Q ss_pred eEEeeeccc--ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEE
Q psy7482 219 LWQIKASAS--RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVV 294 (327)
Q Consensus 219 ~~~~~~~~~--~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~i 294 (327)
+..+.+|.. .+.+++|+ |+++.+++++.|+.|++||++++.++..+.+|.+.|++++|+| ++|++|+.||+|++
T Consensus 346 ~~~~~~~~~~~~v~~v~fs--p~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~l 423 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYC--PQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLII 423 (524)
T ss_dssp HCEEEEECSCCSCCCEEEE--TTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEEC
T ss_pred ccccccccccCcccceEeC--CCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEE
Confidence 777777754 47899995 8999999999999999999999999889999999999999999 89999999999999
Q ss_pred EEccCc
Q psy7482 295 WELNED 300 (327)
Q Consensus 295 w~~~~~ 300 (327)
|++...
T Consensus 424 wd~~~~ 429 (524)
T 2j04_B 424 TNAARR 429 (524)
T ss_dssp CBSCSS
T ss_pred EechHh
Confidence 997554
No 99
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.9e-37 Score=255.06 Aligned_cols=247 Identities=12% Similarity=0.101 Sum_probs=198.9
Q ss_pred EEeeeeccCCccEEEEEeCCCEEEEec-----------CCCeEEEEEcccccccc---------ccccccccEEEEEECC
Q psy7482 5 TQTFVTHSHTASVRSVAATSKLAASSG-----------ADETVVLYDMVKRKQSG---------ALMQHEGTITCLKFTP 64 (327)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~l~~~~-----------~dg~v~~w~~~~~~~~~---------~~~~~~~~v~~~~~~~ 64 (327)
...+.+.+|...|++++++++.+++|. .|+.+++|++.+..... ....+...+.+++|+|
T Consensus 64 ~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp 143 (365)
T 4h5i_A 64 LSEFALEDNDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR 143 (365)
T ss_dssp EEEEECCTTSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT
T ss_pred eeEEEccCCCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC
Confidence 344567789999999999888887764 47789999987653221 1123455689999999
Q ss_pred CCCeEEE--ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccC
Q psy7482 65 EGSHLIS--CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYG 142 (327)
Q Consensus 65 ~~~~l~~--~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 142 (327)
||++|++ ++.|++|++||+++++....+ .|... |.+++|+|+++++++++. +.+.+|+..+++.........
T Consensus 144 Dg~~la~as~~~d~~i~iwd~~~~~~~~~~--~~~~~-V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~-- 217 (365)
T 4h5i_A 144 EGTVAAIASSKVPAIMRIIDPSDLTEKFEI--ETRGE-VKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFD-- 217 (365)
T ss_dssp TSSCEEEEESCSSCEEEEEETTTTEEEEEE--ECSSC-CCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCC--
T ss_pred CCCEEEEEECCCCCEEEEeECCCCcEEEEe--CCCCc-eEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCC--
Confidence 9999764 457899999999999988877 35555 999999999999999885 567788877777654433332
Q ss_pred ccccceEEEEEccCCcEEEeec-CC----eEEEEEecCCcee----eEec-CCCceeEEEeecC-ceEEEeCCCCcEEEE
Q psy7482 143 VGFENLDSVVWSPEGLLYAIPI-QN----KAVVFSVEKAGVL----QTLK-SESKVHSVCFLNE-TTVCTGNEESAITAY 211 (327)
Q Consensus 143 ~~~~~v~~~~~~~~~~~l~~~~-~~----~i~i~d~~~~~~~----~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~ 211 (327)
+...+.+++|+|+++.+++++ ++ .++.|++...... ..+. +...|++++|+|+ .+|++|+.|+.|++|
T Consensus 218 -~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw 296 (365)
T 4h5i_A 218 -KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALV 296 (365)
T ss_dssp -TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred -CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEE
Confidence 245699999999999998886 55 6888998766532 2333 7789999999999 789999999999999
Q ss_pred EcCCCceeEEe-eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482 212 NLTDGSHLWQI-KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG 260 (327)
Q Consensus 212 d~~~~~~~~~~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~ 260 (327)
|+++++++.++ .+|..+|++++| +|+|++|++|+.|++|+|||+...
T Consensus 297 d~~~~~~~~~~~~gH~~~V~~v~f--Spdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 297 KLKDLSMSKIFKQAHSFAITEVTI--SPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ETTTTEEEEEETTSSSSCEEEEEE--CTTSCEEEEEETTSEEEEEECCTT
T ss_pred ECCCCcEEEEecCcccCCEEEEEE--CCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999998885 789999999999 599999999999999999999653
No 100
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.5e-38 Score=257.55 Aligned_cols=259 Identities=11% Similarity=0.052 Sum_probs=216.9
Q ss_pred ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe---EEEeEEecccCCceeeEEEecCCC-EEEEEeCCCCEEE
Q psy7482 49 ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ---LEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRT 124 (327)
Q Consensus 49 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i 124 (327)
...+|.+.|++++|+|++++|++++.|+.|++|++.+++ ....+ ..|... |.+++|+|+++ +|++++.||.|++
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQS-LRYKHP-LLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEE-EECSSC-EEEEEEEESSSEEEEEEETTSCEEE
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceee-eecCCc-eEEEEECCCCCcEEEEEcCCCeEEE
Confidence 345799999999999999999999999999999998776 23344 567776 99999999999 9999999999999
Q ss_pred EEc-CCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecC---------CceeeEecCCCceeEEEe
Q psy7482 125 WNL-VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEK---------AGVLQTLKSESKVHSVCF 193 (327)
Q Consensus 125 wd~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~---------~~~~~~~~~~~~i~~~~~ 193 (327)
||+ .+++.. . +.. ..+...|.+++|+| +.++++++ |+.|++||+++ ++.+..+.+...+.+++|
T Consensus 84 wd~~~~~~~~-~--~~~-~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 158 (342)
T 1yfq_A 84 VDLIGSPSFQ-A--LTN-NEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158 (342)
T ss_dssp ECSSSSSSEE-E--CBS-CCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred EEeccCCceE-e--ccc-cCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEe
Confidence 999 877552 2 221 01345699999999 88888887 99999999998 777777778999999999
Q ss_pred ecCceEEEeCCCCcEEEEEcCC-Cce--eEEeeecccceEEEEEEecC-CCcEEEEecCCCeEEEEEcCCC------cee
Q psy7482 194 LNETTVCTGNEESAITAYNLTD-GSH--LWQIKASASRIKGLVFFSIP-QETTVCTGNEESAITAYNLTDG------SHL 263 (327)
Q Consensus 194 ~~~~~l~~~~~d~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~------~~~ 263 (327)
+|+. +++++.++.|++||+++ +.. ......|...+.+++|+ | +++++++++.||.|++|+++.. +..
T Consensus 159 ~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~--~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 159 NSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL--PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp CSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC--SGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred cCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC--CCCCCEEEEEecCCcEEEEEEcCCCcccccccc
Confidence 9987 99999999999999988 543 33445678899999995 8 9999999999999999999887 788
Q ss_pred EEeecccC---------ceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCC-CCceEEEE
Q psy7482 264 WHIKASAS---------RIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATND-GCRFTCLA 321 (327)
Q Consensus 264 ~~~~~~~~---------~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~i~~l~ 321 (327)
..+..|.. .|.+++|+| ++|++++.||.|++||+..+. . ......+ ..+|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---~-~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK---K-IKNFAKFNEDSVVKIA 301 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---E-EEECCCCSSSEEEEEE
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh---H-hhhhhcccCCCceEec
Confidence 88888865 999999999 899999999999999998872 2 1122334 78899988
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-37 Score=261.13 Aligned_cols=279 Identities=13% Similarity=0.110 Sum_probs=225.8
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEccccc---ccccccc-------------------------------------
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRK---QSGALMQ------------------------------------- 52 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~---~~~~~~~------------------------------------- 52 (327)
.++.+++| +|++|+++ .++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 46778888 88876665 47899999999888 5444432
Q ss_pred -----------------ccccEEEEEECCCCCeE-EEecCCCcEEEEEcC--CCeEEEeEEe-cccCCceeeEEEecCCC
Q psy7482 53 -----------------HEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVG--SWQLEKLFKK-AHKGTAVNHISIHPSGK 111 (327)
Q Consensus 53 -----------------~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~--~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 111 (327)
|.+.|++++|+|++++| ++++.||.|++||+. +++....+.. .+... |.+++|+|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-v~~~~~sp~~~ 162 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKR-PNAISIAEDDT 162 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSC-EEEEEECTTSS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCC-ceEEEEcCCCC
Confidence 33479999999999996 899999999999999 8888877732 34455 99999999999
Q ss_pred EEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC---CcEEEeec-CCeEEEEEecCCceeeEec--CC
Q psy7482 112 LALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE---GLLYAIPI-QNKAVVFSVEKAGVLQTLK--SE 185 (327)
Q Consensus 112 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~ 185 (327)
+|++++.+|.+++|++.+++.... .......+...|.+++|+|+ +++|++++ |+.|++||+++++.+..+. |.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKF-TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSC-CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred EEEEEeCCCcEEEEecCCcccccc-cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 999999999999999988765420 00111223456999999999 98998887 9999999999998887743 88
Q ss_pred CceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeec-------------------------ccceEEEEEEecCC
Q psy7482 186 SKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKAS-------------------------ASRIKGLVFFSIPQ 239 (327)
Q Consensus 186 ~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------------------~~~v~~~~~~~s~~ 239 (327)
..|.+++|+ + .+|++++.|+.|++||+++++.+..+..+ ...+..++|. |+
T Consensus 242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~--~~ 318 (450)
T 2vdu_B 242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS--KN 318 (450)
T ss_dssp SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC--SS
T ss_pred CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe--CC
Confidence 999999999 8 89999999999999999999988877633 3468889985 89
Q ss_pred CcEEEEec-CCCeEEEEEc--CCC---ceeEEeecccCceEEEeeeC-cEEEEEec-------CCcEEEEEccCc
Q psy7482 240 ETTVCTGN-EESAITAYNL--TDG---SHLWHIKASASRIKGLASHR-NHLICITS-------AGDLVVWELNED 300 (327)
Q Consensus 240 ~~~l~~~~-~d~~i~i~d~--~~~---~~~~~~~~~~~~v~~~~~~~-~~l~~~~~-------dg~v~iw~~~~~ 300 (327)
+++|++++ .|+.|++|++ .++ +.+..+..| ..|.+++|+| .++++.+. +..|.+|.+...
T Consensus 319 ~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 319 LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 99999988 8999999999 565 677778888 7999999999 55555543 455899988654
No 102
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.3e-37 Score=253.90 Aligned_cols=276 Identities=16% Similarity=0.241 Sum_probs=223.5
Q ss_pred EEEccccccccccccccccEEEEEECCC---CCeEEEecCCCcEEEEEcCC-CeEE-EeEEecccCCceeeEEEecCCCE
Q psy7482 38 LYDMVKRKQSGALMQHEGTITCLKFTPE---GSHLISCSDDGSIAIFRVGS-WQLE-KLFKKAHKGTAVNHISIHPSGKL 112 (327)
Q Consensus 38 ~w~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iw~~~~-~~~~-~~~~~~~~~~~v~~~~~~~~~~~ 112 (327)
.|+....+.+..+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+ ++.. ..+ ..|... |.+++|+|++++
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~ 100 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQ-QMHTGP-VLDVCWSDDGSK 100 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEE-EECSSC-EEEEEECTTSSE
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEe-ccccCC-EEEEEECcCCCE
Confidence 3455566777788899999999999998 59999999999999999987 5555 455 778877 999999999999
Q ss_pred EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEE--ccCCcEEEeec-CCeEEEEEecCCceeeEecCCCcee
Q psy7482 113 ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW--SPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVH 189 (327)
Q Consensus 113 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~ 189 (327)
|++++.||.|++||+++++...... +...+.+++| +|++.++++++ |+.|++||+++++.+..+.....+.
T Consensus 101 l~s~~~dg~v~iwd~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 174 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQAIQIAQ------HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCY 174 (368)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE------CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEE
T ss_pred EEEEcCCCcEEEEEcCCCCceeecc------ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCce
Confidence 9999999999999999888765433 2345999999 89999888887 9999999999999999998777888
Q ss_pred EEEeecCceEEEeCCCCcEEEEEcCCCceeEEe--eecccceEEEEEEecCC--CcEEEEecCCCeEEEEEcCCC---ce
Q psy7482 190 SVCFLNETTVCTGNEESAITAYNLTDGSHLWQI--KASASRIKGLVFFSIPQ--ETTVCTGNEESAITAYNLTDG---SH 262 (327)
Q Consensus 190 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~---~~ 262 (327)
++.+.++ .+++++.++.+.+|+++........ ..+......+.+.+.+. ...+++++.|+.|++||+... ..
T Consensus 175 ~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 175 CADVIYP-MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKD 253 (368)
T ss_dssp EEEEETT-EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred EEEecCC-eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccc
Confidence 8887764 6777888999999999876543322 22334556666653222 233999999999999999987 56
Q ss_pred eEEeecccC------------ceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 263 LWHIKASAS------------RIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 263 ~~~~~~~~~------------~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
+..+..|.. +|++++|+| ++|++++.||.|++||+..+. . ......+..+|++++|+|+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~--~--~~~~~~~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART--K--LKTSEQLDQPISACCFNHNG 327 (368)
T ss_dssp SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE--E--EEECCCCSSCEEEEEECTTS
T ss_pred ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc--E--EEEecCCCCCceEEEECCCC
Confidence 778888876 799999999 799999999999999999872 1 12223567889999999974
No 103
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9.7e-38 Score=262.82 Aligned_cols=281 Identities=16% Similarity=0.255 Sum_probs=229.8
Q ss_pred CCeEEEEEccccccccccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCCeEEEeEE------------ecccCC
Q psy7482 33 DETVVLYDMVKRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFK------------KAHKGT 99 (327)
Q Consensus 33 dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~------------~~~~~~ 99 (327)
++.+++|++..++....+.+|.+.|++++|+| ++++|++|+.||.|++||+.+++....+. .+|...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 45688899988888888999999999999999 99999999999999999998876655542 136666
Q ss_pred ceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC---cEEEeec-CCeEEEEEec
Q psy7482 100 AVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG---LLYAIPI-QNKAVVFSVE 174 (327)
Q Consensus 100 ~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~-~~~i~i~d~~ 174 (327)
|.+++|+| ++.+|++++.||.|++||+++++....+..... +.++.++|.+ .++++++ ++.|++||++
T Consensus 102 -v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 102 -VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEET------VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp -EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSC------EEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred -EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCc------eeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 99999999 778999999999999999999988777765444 8899999854 4788876 9999999999
Q ss_pred CCceeeEec-CCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCc-eeEEe---------------eecccceEEEEEE
Q psy7482 175 KAGVLQTLK-SESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGS-HLWQI---------------KASASRIKGLVFF 235 (327)
Q Consensus 175 ~~~~~~~~~-~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~-~~~~~---------------~~~~~~v~~~~~~ 235 (327)
+++.+..+. |...|.+++|+|+ . ++++++.||.|++||++++. .+..+ ..|...|.+++|+
T Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 254 (408)
T 4a11_B 175 SGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT 254 (408)
T ss_dssp SSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred CcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc
Confidence 999888888 8899999999998 4 58899999999999998765 33333 5788899999995
Q ss_pred ecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc------CceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCceee
Q psy7482 236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA------SRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQRV 308 (327)
Q Consensus 236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~ 308 (327)
|++++|++++.|+.|++||+.+++....+..+. .......... ..+++++.|+.|++||+..+. + ..
T Consensus 255 --~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~-~~ 328 (408)
T 4a11_B 255 --SDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE---Q-IT 328 (408)
T ss_dssp --TTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC---E-EE
T ss_pred --CCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCc---c-ee
Confidence 899999999999999999999988665544331 1111222222 778888899999999998872 2 12
Q ss_pred eecCCCCceEEEEeCCCC
Q psy7482 309 SATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 309 ~~~~~~~~i~~l~~~p~~ 326 (327)
....|...|++++|+|+.
T Consensus 329 ~~~~~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 329 MLKGHYKTVDCCVFQSNF 346 (408)
T ss_dssp EECCCSSCEEEEEEETTT
T ss_pred eeccCCCeEEEEEEcCCC
Confidence 223477889999999974
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-38 Score=266.45 Aligned_cols=262 Identities=11% Similarity=0.069 Sum_probs=209.7
Q ss_pred ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (327)
Q Consensus 11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~ 88 (327)
+.-...|.+++| ||+++|+++.|++|+ |...+ ..+.+|...|.+++|+|+| .++.+.+|+.+ .
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~---~ 76 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQ---Q 76 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCC---S
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCC---C
Confidence 356688999999 999999999999999 64444 4557999999999999998 46565555543 2
Q ss_pred EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCe
Q psy7482 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNK 167 (327)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~ 167 (327)
...+...+... |.+++|+|+|+.|++++.||.|++||.+. ....+. +........+.+++|+|+|++|++|+ ||+
T Consensus 77 ~~~~~~~~~~~-V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGt 152 (588)
T 2j04_A 77 NGLLNSQPVCY-PRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGE 152 (588)
T ss_dssp SCSSTTSCSCC-EEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSE
T ss_pred ceEeecCCCCc-EEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCE
Confidence 22332245455 99999999999999999999999999543 333322 22111123599999999999999998 999
Q ss_pred EEEEEecCCce-------eeEec-----CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCce---eEEe-eecccceEE
Q psy7482 168 AVVFSVEKAGV-------LQTLK-----SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSH---LWQI-KASASRIKG 231 (327)
Q Consensus 168 i~i~d~~~~~~-------~~~~~-----~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~-~~~~~~v~~ 231 (327)
|++||+.+++. +..+. |...|.+++|+|++ +++++.|+.|++||+..++. ..++ .+|...|.+
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 99999998753 45652 56799999999999 99999999999999988773 3456 478889999
Q ss_pred EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee--eC--cEEEEEecCCcEEEEEcc
Q psy7482 232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS--HR--NHLICITSAGDLVVWELN 298 (327)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~--~~l~~~~~dg~v~iw~~~ 298 (327)
++|+ |+.||+++ ++.|++||+.+++......+|.+.+.+++| +| ..++++++||+ ++|..+
T Consensus 232 vaFs----g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 232 LKIV----DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEE----TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEE----CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 9993 68899887 699999999988874444489999999999 88 68999999999 999873
No 105
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=246.63 Aligned_cols=253 Identities=17% Similarity=0.251 Sum_probs=213.7
Q ss_pred eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482 3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (327)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 80 (327)
++.+.+.+++|...|++++| ++++||+|+.||+|++||+.+++.+..+.+|...+.++.+. +..+++++.++.+++
T Consensus 56 ~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~ 133 (318)
T 4ggc_A 56 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHH 133 (318)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--TTEEEEEETTSEEEE
T ss_pred CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--CCEEEEEecCCceEe
Confidence 45677888899999999999 89999999999999999999999999999999988876654 679999999999999
Q ss_pred EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE-
Q psy7482 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL- 159 (327)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~- 159 (327)
|+............+|... +..+.+.++++++++++.||.|++||+++++....... ....+...+.++.++|++..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~ 211 (318)
T 4ggc_A 134 HDVRVAEHHVATLSGHSQE-VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ-TFTQHQGAVKAVAWCPWQSNV 211 (318)
T ss_dssp EETTSSSCEEEEEECCSSC-EEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSE-EECCCCSCEEEEEECTTSTTE
T ss_pred eecCCCceeEEEEcCccCc-eEEEEEcCCCCEEEEEecCcceeEEECCCCccccccee-eecccCCceEEEEecCCCCcE
Confidence 9998765443332778877 99999999999999999999999999988764332211 11223445999999997653
Q ss_pred E--Eeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEE--eCCCCcEEEEEcCCCceeEEeeecccceEEEE
Q psy7482 160 Y--AIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCT--GNEESAITAYNLTDGSHLWQIKASASRIKGLV 233 (327)
Q Consensus 160 l--~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 233 (327)
+ ++++ ++.|++||.+.........+...+..+.|+|+ +.+++ |+.|+.|++||+++++++.++.+|.++|++++
T Consensus 212 ~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~ 291 (318)
T 4ggc_A 212 LATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLT 291 (318)
T ss_dssp EEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred EEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 3 2334 78999999999998888888999999999998 55554 45899999999999999999999999999999
Q ss_pred EEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482 234 FFSIPQETTVCTGNEESAITAYNLTDGS 261 (327)
Q Consensus 234 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~ 261 (327)
|+ |++++|++|+.||+|++||+.+..
T Consensus 292 ~s--pdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 292 MS--PDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EC--TTSSCEEEEETTTEEEEECCSCCC
T ss_pred Ec--CCCCEEEEEecCCeEEEEECCCCC
Confidence 95 999999999999999999987654
No 106
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.1e-36 Score=255.12 Aligned_cols=273 Identities=12% Similarity=0.108 Sum_probs=231.1
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEcccccccc-----ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG-----ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 87 (327)
..+.+++| ++.++++++.++.|++||+.+++... .+.+|...|.+++|+|+++++++++.|+.|++||+++++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 34557888 67788888889999999999988776 556789999999999999999999999999999999999
Q ss_pred EEEeEEecccCCceeeEEEecCCCEEEEEe-CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--
Q psy7482 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-- 164 (327)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-- 164 (327)
....+ ..+... +.+++|+|+++.+++++ .|+.|++||+++++....+.... .+.+++|+|+++.++++.
T Consensus 203 ~~~~~-~~~~~~-~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 203 YKATV-DLTGKW-SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG------LPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp EEEEE-ECSSSS-EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS------EEEEEEECTTSSEEEEEEEE
T ss_pred EEEEE-cCCCCC-eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC------CceEEEEcCCCCEEEEEECC
Confidence 88888 666666 99999999999886554 79999999999887765554432 289999999998887765
Q ss_pred -------CCeEEEEEecCCceeeEecCCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482 165 -------QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF 235 (327)
Q Consensus 165 -------~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 235 (327)
|+.|++||+++++....+.+...+.+++|+|+ + .+++++.++.|++||+.+++.+..+. +...+.+++|+
T Consensus 275 ~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s 353 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALS 353 (433)
T ss_dssp SCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEEC
T ss_pred CCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEc
Confidence 67999999999998888877778999999998 3 45677999999999999988887776 66778999994
Q ss_pred ecCCCcEEEEecC---------------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEec-CCcEEEEEc
Q psy7482 236 SIPQETTVCTGNE---------------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITS-AGDLVVWEL 297 (327)
Q Consensus 236 ~s~~~~~l~~~~~---------------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~-dg~v~iw~~ 297 (327)
|+++++++++. ||.|++||+.+++.+..+..+ ..+.+++|+| ++|++++. |+.|++|++
T Consensus 354 --~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 354 --PDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp --TTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred --CCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 89998888766 579999999999988888764 4789999999 77777764 999999998
Q ss_pred cC
Q psy7482 298 NE 299 (327)
Q Consensus 298 ~~ 299 (327)
+.
T Consensus 431 ~~ 432 (433)
T 3bws_A 431 DG 432 (433)
T ss_dssp TT
T ss_pred cC
Confidence 63
No 107
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.3e-36 Score=251.14 Aligned_cols=246 Identities=15% Similarity=0.155 Sum_probs=191.8
Q ss_pred EEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEE-EEE
Q psy7482 38 LYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLA-LSV 116 (327)
Q Consensus 38 ~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~ 116 (327)
||++.+.+++..+..|...|++++|+|+|++|++|+.++ +++|++.+++..... +... +..+++.++++.+ +++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ---EMRH-LSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE---ECSC-CCEEEECTTSSEEEEEC
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee---ecCC-eEEEEEcCCCCEEEEEE
Confidence 566777777778889999999999999999999998775 789999887665543 2224 7888899988877 557
Q ss_pred eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCC-ceeeEecCCCceeEEEeec
Q psy7482 117 GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKA-GVLQTLKSESKVHSVCFLN 195 (327)
Q Consensus 117 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~ 195 (327)
+.|+.|++||+.+++.+..+.... .+.++.++++. ++++.++.|++||+.++ +.+..+.. +...+++++
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~~~~------~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~ 147 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIKVDA------PVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDDIR--FGGVCEFSN 147 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEECSS------CEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCCEE--EEEEEEEET
T ss_pred CCccEEEEEECCCCcEEEEEECCC------ceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEecc--CCceEEEEc
Confidence 778999999999998877765443 39999998764 55567899999999988 66666555 455566777
Q ss_pred CceEEE--eCCCCcEEEEEcCCCc---------------e-eEEeeecccceEEEEEEecCCCcEEEEecCCCe-EEEEE
Q psy7482 196 ETTVCT--GNEESAITAYNLTDGS---------------H-LWQIKASASRIKGLVFFSIPQETTVCTGNEESA-ITAYN 256 (327)
Q Consensus 196 ~~~l~~--~~~d~~i~i~d~~~~~---------------~-~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~-i~i~d 256 (327)
.++++ |+.+|.|++||+++++ + +..+.+|..+|.+++|+ |++++|++|+.|++ |++||
T Consensus 148 -~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s--~~g~~l~s~s~d~~~v~iwd 224 (355)
T 3vu4_A 148 -GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN--RKSDMVATCSQDGTIIRVFK 224 (355)
T ss_dssp -TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC--TTSSEEEEEETTCSEEEEEE
T ss_pred -cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC--CCCCEEEEEeCCCCEEEEEE
Confidence 55555 7899999999998865 2 67889999999999995 99999999999998 99999
Q ss_pred cCCCceeEEee-c-ccCceEEEeeeC--cEEEEEecCCcEEEEEccCcc
Q psy7482 257 LTDGSHLWHIK-A-SASRIKGLASHR--NHLICITSAGDLVVWELNEDV 301 (327)
Q Consensus 257 ~~~~~~~~~~~-~-~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~ 301 (327)
+++++++..+. + |...|++++|+| ++|++++.|+.|++||+....
T Consensus 225 ~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 225 TEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 99999999998 5 999999999999 899999999999999998763
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-37 Score=254.83 Aligned_cols=261 Identities=10% Similarity=0.104 Sum_probs=209.4
Q ss_pred CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC---------CCeEEEeEE
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG---------SWQLEKLFK 93 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~---------~~~~~~~~~ 93 (327)
++++|++|+.||+|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+..+.
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 78899999999999999999998887776 567888889987 9999999999999665 555555554
Q ss_pred ecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEE
Q psy7482 94 KAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVV 170 (327)
Q Consensus 94 ~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i 170 (327)
..|... |.+++|+| +++++++++.||.|++||+++++........ +...+.+++|+|++.++++|+ |+.|++
T Consensus 122 ~~~~~~-v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~----~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 122 VDSANE-IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK----SDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp CCCSSC-EEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC----SSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred cCCCCC-EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC----CCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 466566 99999999 9999999999999999999998875443222 123499999999999999987 999999
Q ss_pred EEecCCcee-eEec--CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee---cccceE--EEEEEecCCCc
Q psy7482 171 FSVEKAGVL-QTLK--SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA---SASRIK--GLVFFSIPQET 241 (327)
Q Consensus 171 ~d~~~~~~~-~~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~--~~~~~~s~~~~ 241 (327)
||+++++.. ..+. |..+|.+++|+|+ .+|++++ ++.|++||+++++.+..+.. |...+. +++| +|+++
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~ 273 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI--DDSGK 273 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEE--CTTSS
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEE--CCCCC
Confidence 999999877 5665 6899999999999 6788888 55999999999877655543 444444 5888 49999
Q ss_pred EEEEecC-CCeEEEEEcCCCceeEEeecccCceEEEeeeC-----cEEEEEecCCcEEEEEccCc
Q psy7482 242 TVCTGNE-ESAITAYNLTDGSHLWHIKASASRIKGLASHR-----NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 242 ~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~dg~v~iw~~~~~ 300 (327)
+|++++. |+.+++|++......... .++..+.|.+ ..+++++.||.+.++-....
T Consensus 274 ~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~ 334 (343)
T 3lrv_A 274 NMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND 334 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEECSS
T ss_pred EEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEecCC
Confidence 9999888 999999999776654444 4677888886 78999999999998865544
No 109
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=3.8e-35 Score=245.90 Aligned_cols=263 Identities=12% Similarity=0.173 Sum_probs=223.2
Q ss_pred CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEecccCCcee
Q psy7482 24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (327)
Q Consensus 24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~ 102 (327)
+.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++....+ ..+. . +.
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~-~~~~-~-v~ 77 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV-PAGS-S-PQ 77 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE-ECSS-S-EE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE-ECCC-C-cc
Confidence 3468899999999999999999988888665 48999999999977 67778999999999999998887 4333 4 99
Q ss_pred eEEEecCCCEEEEEe-CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE-Eeec-CCeEEEEEecCCcee
Q psy7482 103 HISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY-AIPI-QNKAVVFSVEKAGVL 179 (327)
Q Consensus 103 ~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~-~~~i~i~d~~~~~~~ 179 (327)
+++|+|++++|++++ .++.|++||+.+++.......... +.+++|+|+++.+ +++. ++.|++||+.+++.+
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS------PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS------EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCC------cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 999999999876554 679999999999888766654433 8999999999876 5555 899999999999999
Q ss_pred eEecCCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEec---CCCeEEE
Q psy7482 180 QTLKSESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN---EESAITA 254 (327)
Q Consensus 180 ~~~~~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~---~d~~i~i 254 (327)
..+.....+.+++|+|+ +.+ ++++.++.|++||+++++.+..+. +...+.+++|+ |+++++++++ .++.|++
T Consensus 152 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~--~~g~~l~~~~~~~~~~~v~~ 228 (391)
T 1l0q_A 152 NTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVN--PEGTKAYVTNVDKYFNTVSM 228 (391)
T ss_dssp EEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEEC--TTSSEEEEEEECSSCCEEEE
T ss_pred EEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEEC--CCCCEEEEEecCcCCCcEEE
Confidence 88887778899999998 555 677889999999999998877765 45578899994 8999998887 6899999
Q ss_pred EEcCCCceeEEeecccCceEEEeeeC--cEE-EEEecCCcEEEEEccCc
Q psy7482 255 YNLTDGSHLWHIKASASRIKGLASHR--NHL-ICITSAGDLVVWELNED 300 (327)
Q Consensus 255 ~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l-~~~~~dg~v~iw~~~~~ 300 (327)
||+.+++.+..+..|. .+.+++|+| ++| ++++.|+.|++||+.++
T Consensus 229 ~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 229 IDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 9999999988888776 578999999 555 67788999999999876
No 110
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=9.4e-36 Score=252.97 Aligned_cols=257 Identities=14% Similarity=0.287 Sum_probs=218.7
Q ss_pred cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc
Q psy7482 52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (327)
Q Consensus 52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 131 (327)
+|...|.++.+ ++++|++|+.||.|++||+.+++....+ .+|... |.+++| ++++|++|+.||.|++||+++++
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~h~~~-v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRIL-TGHTGS-VLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEE-CCCSSC-EEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEE-cCCCCc-EEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 46677998887 6899999999999999999999999888 788887 999998 68899999999999999999998
Q ss_pred eeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCcee---eEec-CCCceeEEEeecCceEEEeCCCC
Q psy7482 132 SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVL---QTLK-SESKVHSVCFLNETTVCTGNEES 206 (327)
Q Consensus 132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~---~~~~-~~~~i~~~~~~~~~~l~~~~~d~ 206 (327)
....+.. +...+.+++|++ ..+++++ |+.|++||+++++.. ..+. |...|.++++ ..+++++|+.||
T Consensus 205 ~~~~~~~-----h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg 276 (435)
T 1p22_A 205 MLNTLIH-----HCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDR 276 (435)
T ss_dssp EEEEECC-----CCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEEETTS
T ss_pred EEEEEcC-----CCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEEeCCC
Confidence 7665543 244599999974 4677766 999999999988765 3343 7889999999 347999999999
Q ss_pred cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEE
Q psy7482 207 AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICI 286 (327)
Q Consensus 207 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 286 (327)
.|++||+++++.+..+.+|...+.++.+ ++.++++|+.||.|++||+++++++..+.+|...|.+++|++.+|++|
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg 352 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG 352 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEE----ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEE
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEe----CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEE
Confidence 9999999999999999999999999987 468999999999999999999999999999999999999988999999
Q ss_pred ecCCcEEEEEccCccCCC-----ceeeeecCCCCceEEEEeCCCC
Q psy7482 287 TSAGDLVVWELNEDVTRE-----PQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 287 ~~dg~v~iw~~~~~~~~~-----~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
+.||.|++||+....... ........|...|++++|.+..
T Consensus 353 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 397 (435)
T 1p22_A 353 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ 397 (435)
T ss_dssp ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSC
T ss_pred eCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCE
Confidence 999999999997763110 0222334577889999996653
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-37 Score=277.56 Aligned_cols=243 Identities=15% Similarity=0.247 Sum_probs=206.3
Q ss_pred eccCCccEEEEEe--CCCEEEEecCCCeEEEEEcc--ccccccccccccccEEEEEECCC--CCeEEEecCCCcEEEEEc
Q psy7482 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAIFRV 83 (327)
Q Consensus 10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~ 83 (327)
+.+|.+.|++++| ++++|++|+.||.|++||+. +++....+.+|.++|++++|+|+ +++|++|+.||.|++||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 4599999999999 89999999999999999998 66778889999999999999988 999999999999999999
Q ss_pred CCCe--EEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc----
Q psy7482 84 GSWQ--LEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP---- 155 (327)
Q Consensus 84 ~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---- 155 (327)
.+++ ....+ ..|... |.+++|+|+ ++.+++++.||.|++||++++.......... +...+.+++|+|
T Consensus 85 ~~~~~~~~~~~-~~h~~~-V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~---~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 85 ENGRWSQIAVH-AVHSAS-VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA---HAIGVNSASWAPATIE 159 (753)
T ss_dssp ETTEEEEEEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC---CSSCEEEEEECCCC--
T ss_pred CCCcccccccc-cCCCCC-eEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec---CCCceEEEEecCcccc
Confidence 9887 45555 667777 999999998 9999999999999999998875444333332 245599999999
Q ss_pred ---------CCcEEEeec-CCeEEEEEecCC----ceeeEec-CCCceeEEEeecC----ceEEEeCCCCcEEEEEcCCC
Q psy7482 156 ---------EGLLYAIPI-QNKAVVFSVEKA----GVLQTLK-SESKVHSVCFLNE----TTVCTGNEESAITAYNLTDG 216 (327)
Q Consensus 156 ---------~~~~l~~~~-~~~i~i~d~~~~----~~~~~~~-~~~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~ 216 (327)
++.++++++ ||.|++||++++ .....+. |...|.+++|+|+ .++++++.||.|++||++++
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 478888887 999999999887 3444555 7899999999998 47889999999999999886
Q ss_pred c-----eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482 217 S-----HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD 259 (327)
Q Consensus 217 ~-----~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~ 259 (327)
+ .+.....|...+++++|+ |+++++++++.||.|++|++..
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~l~~s--pdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 240 QGPWKKTLLKEEKFPDVLWRASWS--LSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSCCBCCBSSSSCCSSCCCCEEEC--TTTCCEEEECSSSCEECCBCCS
T ss_pred CCcceeEEeccCCCCCceEEEEEc--CCCCEEEEEcCCCEEEEEecCC
Confidence 4 333445688899999995 9999999999999999999875
No 112
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.8e-36 Score=256.82 Aligned_cols=248 Identities=14% Similarity=0.307 Sum_probs=208.5
Q ss_pred ccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcCC----------CeEEEeEEecccCCceeeEEEecCCC-EEEEE
Q psy7482 49 ALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGS----------WQLEKLFKKAHKGTAVNHISIHPSGK-LALSV 116 (327)
Q Consensus 49 ~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 116 (327)
....|.+.|++++|+|+ +.+|++++.||.|++|++.+ .+....+ .+|... |.+++|+|++. +|+++
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~-~~h~~~-v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRL-RGHQKE-GYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEE-ECCSSC-CCCEEECTTSTTEEEEE
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEe-cCCCCC-eEEEEeCCCCCCeEEEE
Confidence 34569999999999997 67999999999999999976 5666677 778777 99999999888 99999
Q ss_pred eCCCCEEEEEcCCCceee-e-eeccccCccccceEEEEEcc-CCcEEEeec-CCeEEEEEecCC---ceeeEec-CCCce
Q psy7482 117 GKDKTLRTWNLVKGRSAY-I-TNLSSYGVGFENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKA---GVLQTLK-SESKV 188 (327)
Q Consensus 117 ~~dg~i~iwd~~~~~~~~-~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~---~~~~~~~-~~~~i 188 (327)
+.||.|++||+.++.... . ........+...|.+++|+| ++.++++++ ++.|++||++++ +.+..+. |...|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 999999999998743211 1 01111123455699999999 667888876 999999999987 4666664 88999
Q ss_pred eEEEeecC-c-eEEEeCCCCcEEEEEcCC-CceeEEeeecccceEEEEEEecCCC-cEEEEecCCCeEEEEEcCC-----
Q psy7482 189 HSVCFLNE-T-TVCTGNEESAITAYNLTD-GSHLWQIKASASRIKGLVFFSIPQE-TTVCTGNEESAITAYNLTD----- 259 (327)
Q Consensus 189 ~~~~~~~~-~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~s~~~-~~l~~~~~d~~i~i~d~~~----- 259 (327)
.+++|+|+ . ++++|+.||.|++||+++ .+++..+..|...|.+++|+ |++ .+|++++.|+.|++||+..
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s--p~~~~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS--PHNETILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEEC--SSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEEC--CCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence 99999998 3 688999999999999998 56788889999999999995 777 4699999999999999987
Q ss_pred ---------CceeEEeecccCceEEEeeeC--c-EEEEEecCCcEEEEEccCc
Q psy7482 260 ---------GSHLWHIKASASRIKGLASHR--N-HLICITSAGDLVVWELNED 300 (327)
Q Consensus 260 ---------~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~v~iw~~~~~ 300 (327)
.+.+..+.+|...|++++|+| + +|++++.||.|++|++...
T Consensus 359 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 359 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 367788889999999999999 4 8999999999999999875
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-37 Score=277.06 Aligned_cols=246 Identities=17% Similarity=0.275 Sum_probs=206.8
Q ss_pred cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC--CCeEEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEE
Q psy7482 48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG--SWQLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLR 123 (327)
Q Consensus 48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~ 123 (327)
..+.+|.+.|++++|+|++++|++|+.||.|++||+. +++....+ .+|... |.+++|+|+ +++|++++.||.|+
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l-~~h~~~-V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-TGHEGP-VWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEE-CCCSSC-EEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceec-cCCcCc-eEEEEecCCCCCCEEEEEeCCCeEE
Confidence 4678999999999999999999999999999999998 45666666 778877 999999987 99999999999999
Q ss_pred EEEcCCCceeeeeeccccCccccceEEEEEccC--CcEEEeec-CCeEEEEEecCCcee--eEe-cCCCceeEEEeec--
Q psy7482 124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE--GLLYAIPI-QNKAVVFSVEKAGVL--QTL-KSESKVHSVCFLN-- 195 (327)
Q Consensus 124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~d~~~~~~~--~~~-~~~~~i~~~~~~~-- 195 (327)
+||+.+++......... +...|.+++|+|+ +..+++++ ||.|++||++++... ..+ .+...|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~~~~---h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAV---HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp EEEEETTEEEEEEEECC---CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred EEECCCCcccccccccC---CCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 99999886433333332 3456999999999 88998887 999999999887432 233 3888999999999
Q ss_pred -----------C-ceEEEeCCCCcEEEEEcCCC----ceeEEeeecccceEEEEEEecCC---CcEEEEecCCCeEEEEE
Q psy7482 196 -----------E-TTVCTGNEESAITAYNLTDG----SHLWQIKASASRIKGLVFFSIPQ---ETTVCTGNEESAITAYN 256 (327)
Q Consensus 196 -----------~-~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~s~~---~~~l~~~~~d~~i~i~d 256 (327)
+ ..+++|+.||.|++||++++ .....+.+|..+|.+++|+ |+ ++++++++.||.|++||
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s--p~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS--PTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC--CCCSSSEEEEEEESSSCEEEEE
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec--cCCCCCCEEEEEecCCEEEEec
Confidence 4 78999999999999999877 4566778899999999995 78 89999999999999999
Q ss_pred cCCCc-----eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 257 LTDGS-----HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 257 ~~~~~-----~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
+.+++ .+.....|...|++++|+| .+|++++.||.|++|++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp ESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 98875 3344456888999999999 89999999999999999864
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5e-36 Score=254.15 Aligned_cols=243 Identities=16% Similarity=0.324 Sum_probs=205.2
Q ss_pred eeccCCccEEEEEe--C-CCEEEEecCCCeEEEEEccc----------cccccccccccccEEEEEECCCCC-eEEEecC
Q psy7482 9 VTHSHTASVRSVAA--T-SKLAASSGADETVVLYDMVK----------RKQSGALMQHEGTITCLKFTPEGS-HLISCSD 74 (327)
Q Consensus 9 ~~~~h~~~v~~~~~--~-~~~l~~~~~dg~v~~w~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 74 (327)
...+|.+.|++++| + +.+||+++.||.|++||+.+ .+....+.+|...|.+++|+|++. +|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34579999999999 3 67999999999999999987 567778889999999999999988 9999999
Q ss_pred CCcEEEEEcCCCeE-------EEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCc---eeeeeeccccCc
Q psy7482 75 DGSIAIFRVGSWQL-------EKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGR---SAYITNLSSYGV 143 (327)
Q Consensus 75 d~~i~iw~~~~~~~-------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~ 143 (327)
||.|++|++..+.. ...+ ..|... |.+++|+| ++.+|++++.||.|++||++++. ....+. .
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-----~ 275 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIF-TGHTAV-VEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-----A 275 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEE-CCCSSC-EEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-----C
T ss_pred CCeEEEEeCCCCCCCCceeccceee-cCCCCC-EeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-----c
Confidence 99999999987322 2334 567777 99999999 77899999999999999999763 333332 2
Q ss_pred cccceEEEEEccCCc-EEEeec-CCeEEEEEecC-CceeeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCC--
Q psy7482 144 GFENLDSVVWSPEGL-LYAIPI-QNKAVVFSVEK-AGVLQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTD-- 215 (327)
Q Consensus 144 ~~~~v~~~~~~~~~~-~l~~~~-~~~i~i~d~~~-~~~~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~-- 215 (327)
+...+.+++|+|++. ++++++ ||.|++||+++ .+.+..+. |...|.+++|+|+ .++++++.|+.|++||+..
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 244599999999987 677776 99999999998 55677776 8899999999998 3689999999999999987
Q ss_pred ------------CceeEEeeecccceEEEEEEecCCCc-EEEEecCCCeEEEEEcCCC
Q psy7482 216 ------------GSHLWQIKASASRIKGLVFFSIPQET-TVCTGNEESAITAYNLTDG 260 (327)
Q Consensus 216 ------------~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~ 260 (327)
.+.+..+.+|...|++++|+ |++. ++++++.||.|++|++...
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 356 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWN--PNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCCCHHHHHHCCTTEEEECCCCSSCEEEEEEC--SSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccCccccccCCcceEEEcCCCCCCceEEEEC--CCCCCEEEEEECCCCEEEeEcccc
Confidence 35677778899999999995 8888 8999999999999998653
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.5e-35 Score=242.62 Aligned_cols=271 Identities=8% Similarity=0.053 Sum_probs=210.4
Q ss_pred eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCC
Q psy7482 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSW 86 (327)
Q Consensus 10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~ 86 (327)
..+|...|.+++| ++++||+|+.++ +++||+.+++....... ..+..+++.++++.+ ++++.|+.|++||..++
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~ 91 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK 91 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEETTTT
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEECCCC
Confidence 3679999999999 899999998775 78999988776554432 247788888888877 56788899999999999
Q ss_pred eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEe--e
Q psy7482 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAI--P 163 (327)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~ 163 (327)
+.+..+ . +... |.++.++++. ++++ .|+.|++||+.++ +.+..+.. +...+++++ .+++. +
T Consensus 92 ~~~~~~-~-~~~~-v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--------~~~~~~~s~--~~la~~sg 155 (355)
T 3vu4_A 92 QDVSRI-K-VDAP-VKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--------FGGVCEFSN--GLLVYSNE 155 (355)
T ss_dssp EEEEEE-E-CSSC-EEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--------EEEEEEEET--TEEEEEES
T ss_pred cEEEEE-E-CCCc-eEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--------CCceEEEEc--cEEEEeCC
Confidence 998887 3 4445 9999998763 4444 4789999999987 55444332 144556666 55555 3
Q ss_pred c-CCeEEEEEecCCc---------------e-eeEec-CCCceeEEEeecC-ceEEEeCCCCc-EEEEEcCCCceeEEee
Q psy7482 164 I-QNKAVVFSVEKAG---------------V-LQTLK-SESKVHSVCFLNE-TTVCTGNEESA-ITAYNLTDGSHLWQIK 223 (327)
Q Consensus 164 ~-~~~i~i~d~~~~~---------------~-~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~-i~i~d~~~~~~~~~~~ 223 (327)
. +|.|++||+++++ + +..+. |...|.+++|+|+ .+|++++.|++ |++||+++++.+..+.
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR 235 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 4 8999999999865 1 45555 8899999999999 78999999998 9999999999999998
Q ss_pred -e-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce--eEEee---------------------cccCceEEEee
Q psy7482 224 -A-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH--LWHIK---------------------ASASRIKGLAS 278 (327)
Q Consensus 224 -~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~---------------------~~~~~v~~~~~ 278 (327)
+ |...|.+++|+ |++++|++++.|+.|++||++.+.. ...+. .+..+...++|
T Consensus 236 ~g~h~~~v~~~~~s--~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 313 (355)
T 3vu4_A 236 RGLDRADVVDMKWS--TDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAW 313 (355)
T ss_dssp CTTCCSCEEEEEEC--TTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEE
T ss_pred cCCCCCcEEEEEEC--CCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEE
Confidence 5 99999999994 9999999999999999999976531 11111 11123467899
Q ss_pred eC--cEEEEEecCCcEEEEEccCcc
Q psy7482 279 HR--NHLICITSAGDLVVWELNEDV 301 (327)
Q Consensus 279 ~~--~~l~~~~~dg~v~iw~~~~~~ 301 (327)
++ +.|++++.||.+++|++..+.
T Consensus 314 ~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 314 ISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp SSSSEEEEEETTTTEEEEEEEEEET
T ss_pred eCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 99 799999999999999998763
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-35 Score=250.93 Aligned_cols=262 Identities=8% Similarity=0.090 Sum_probs=211.8
Q ss_pred cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe---EEEeEEe------------------------------------
Q psy7482 54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ---LEKLFKK------------------------------------ 94 (327)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~------------------------------------ 94 (327)
..++.+++|+|+|++|+++ .++.|++||+.+++ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578899999999966655 57799999999888 5555421
Q ss_pred -----------------cccCCceeeEEEecCCCEE-EEEeCCCCEEEEEcC--CCceeeeeeccccCccccceEEEEEc
Q psy7482 95 -----------------AHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLV--KGRSAYITNLSSYGVGFENLDSVVWS 154 (327)
Q Consensus 95 -----------------~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~ 154 (327)
.|... |.+++|+|++++| ++++.||.|++||+. +++....+..... ...+.+++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~---~~~v~~~~~s 158 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSY-IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF---SKRPNAISIA 158 (450)
T ss_dssp -----------------CCCCC-EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC---SSCEEEEEEC
T ss_pred cccccCccccCCCCCCCccCCc-eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccC---CCCceEEEEc
Confidence 11123 9999999999996 889899999999999 7777666543222 2349999999
Q ss_pred cCCcEEEeec-CCeEEEEEecCCceee----Eec-CCCceeEEEeecC---c-eEEEeCCCCcEEEEEcCCCceeEE-ee
Q psy7482 155 PEGLLYAIPI-QNKAVVFSVEKAGVLQ----TLK-SESKVHSVCFLNE---T-TVCTGNEESAITAYNLTDGSHLWQ-IK 223 (327)
Q Consensus 155 ~~~~~l~~~~-~~~i~i~d~~~~~~~~----~~~-~~~~i~~~~~~~~---~-~l~~~~~d~~i~i~d~~~~~~~~~-~~ 223 (327)
|++++|++++ ++.+++|++.+++... .+. |...|.+++|+|+ + ++++++.|+.|++||+++++.+.. +.
T Consensus 159 p~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 159 EDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC
T ss_pred CCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec
Confidence 9999999987 8999999998877553 444 8889999999997 6 789999999999999999988877 56
Q ss_pred ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc-------------------------cCceEEEee
Q psy7482 224 ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS-------------------------ASRIKGLAS 278 (327)
Q Consensus 224 ~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------------------~~~v~~~~~ 278 (327)
+|...|.+++| + ++++|++++.|+.|++||+.+++++..+..+ ...|.+++|
T Consensus 239 ~h~~~v~~~~~--s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 239 GHKHFVSSICC--G-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp CCSSCEEEEEE--C-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred CCCCceEEEEE--C-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 89999999999 5 9999999999999999999999988887633 346889999
Q ss_pred eC--cEEEEEe-cCCcEEEEEc--cCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482 279 HR--NHLICIT-SAGDLVVWEL--NEDVTREPQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 279 ~~--~~l~~~~-~dg~v~iw~~--~~~~~~~~~~~~~~~~~~~i~~l~~~p~ 325 (327)
+| ++|++++ .|+.|++|++ .... ....+........|.+++|+|+
T Consensus 316 ~~~~~~l~~~~~~d~~i~iw~~~~~~~~--~l~~~~~~~~~~~v~~~~~~~~ 365 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKCIIILEMSEKQKG--DLALKQIITFPYNVISLSAHND 365 (450)
T ss_dssp CSSSSEEEEEETTCSEEEEEEECSSSTT--CEEEEEEEECSSCEEEEEEETT
T ss_pred eCCCCEEEEEECCCCeEEEEEeccCCCC--ceeeccEeccCCceEEEEecCC
Confidence 99 7888888 8999999999 3331 2333333333378999999986
No 117
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.6e-35 Score=249.07 Aligned_cols=261 Identities=16% Similarity=0.202 Sum_probs=211.9
Q ss_pred cEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeE----EEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCC
Q psy7482 56 TITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQL----EKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVK 129 (327)
Q Consensus 56 ~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~ 129 (327)
....++++|+...++ +++.||.|++|++..... ...+ .+|... |.+++|+| ++++|++++.||.|++||+.+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~-~~h~~~-V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLV-CGHTAP-VLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCB-CCCSSC-EEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceE-ecCCCC-EEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 344678888765444 578899999999965432 2334 677777 99999999 999999999999999999988
Q ss_pred Cce-------eeeeeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEecCCceeeEe--c-CCCceeEEEeecC-
Q psy7482 130 GRS-------AYITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVEKAGVLQTL--K-SESKVHSVCFLNE- 196 (327)
Q Consensus 130 ~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~~~~~~~~--~-~~~~i~~~~~~~~- 196 (327)
+.. ...+. .|...|.+++|+|++ .++++++ |+.|++||+++++.+..+ . |...|.+++|+|+
T Consensus 114 ~~~~~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 188 (402)
T 2aq5_A 114 GGLVLPLREPVITLE-----GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDG 188 (402)
T ss_dssp TCCSSCBCSCSEEEE-----CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTS
T ss_pred CCCccccCCceEEec-----CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCC
Confidence 742 22222 234569999999998 6888876 999999999999999888 4 8899999999998
Q ss_pred ceEEEeCCCCcEEEEEcCCCceeEEe-eecccc-eEEEEEEecCCCcEEEEe---cCCCeEEEEEcCCCce-eEEee-cc
Q psy7482 197 TTVCTGNEESAITAYNLTDGSHLWQI-KASASR-IKGLVFFSIPQETTVCTG---NEESAITAYNLTDGSH-LWHIK-AS 269 (327)
Q Consensus 197 ~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~-v~~~~~~~s~~~~~l~~~---~~d~~i~i~d~~~~~~-~~~~~-~~ 269 (327)
.++++++.|+.|++||+++++.+..+ ..|... +..+.|+ |++++|++| +.|+.|++||+++++. +.... .|
T Consensus 189 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 266 (402)
T 2aq5_A 189 ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV--SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT 266 (402)
T ss_dssp SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEEC--STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC
T ss_pred CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEc--CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccC
Confidence 78999999999999999999998888 678775 8899995 899999999 8999999999998764 33333 46
Q ss_pred cCceEEEeeeC--cEEE-EEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 270 ASRIKGLASHR--NHLI-CITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 270 ~~~v~~~~~~~--~~l~-~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
...+.+++|+| ++|+ +++.||.|++|++..+. .....+....+...|.+++|+|+.
T Consensus 267 ~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~-~~~~~l~~~~~~~~v~~~~~sp~~ 325 (402)
T 2aq5_A 267 SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA-PFLHYLSMFSSKESQRGMGYMPKR 325 (402)
T ss_dssp CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST-TCEEEEEEECCSSCCSEEEECCGG
T ss_pred CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC-cceEeecccccCCcccceEEeccc
Confidence 77899999999 6665 56679999999999872 114455555577899999999973
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-37 Score=258.46 Aligned_cols=276 Identities=13% Similarity=0.110 Sum_probs=208.7
Q ss_pred ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (327)
Q Consensus 11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~ 88 (327)
.+|...|.+++| +| .++.+.+|+.+ +.....+ .|...|.+++|+|+|++||+++.||.|++||.+. .
T Consensus 49 ~gh~~~v~~V~FsPdg-------~~~~~~~~~~~-~~~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~ 117 (588)
T 2j04_A 49 NCNSKNLFHVKEFPLE-------FENKLDFELAQ-QNGLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--M 117 (588)
T ss_dssp SSBGGGTEEEEEECCC-------CCCTTTTSCCC-SSCSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--E
T ss_pred cCCCccEEEEEECCCC-------CcceEEEEeCC-CceEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--e
Confidence 589999999999 55 45555555543 2223333 4588899999999999999999999999999653 5
Q ss_pred EEeEEecccC----CceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce-------eeeeeccccCccccceEEEEEccCC
Q psy7482 89 EKLFKKAHKG----TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS-------AYITNLSSYGVGFENLDSVVWSPEG 157 (327)
Q Consensus 89 ~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (327)
+..+ . |.. ..+.+++|+|||++|++|+.||+|++||+.++.. +..+.... ..|...|.+++|+|+|
T Consensus 118 l~~l-~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~-~gh~~~V~sVawSPdg 194 (588)
T 2j04_A 118 LTNL-D-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD-AGSKDWVTHIVWYEDV 194 (588)
T ss_dssp EEEC-C-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC-TTCCCCEEEEEEETTE
T ss_pred eeec-c-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc-ccccccEEEEEEcCCc
Confidence 5555 3 442 1399999999999999999999999999988753 22222222 2355679999999999
Q ss_pred cEEEeecCCeEEEEEecCCce---eeEec--CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEE
Q psy7482 158 LLYAIPIQNKAVVFSVEKAGV---LQTLK--SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL 232 (327)
Q Consensus 158 ~~l~~~~~~~i~i~d~~~~~~---~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~ 232 (327)
+++++.|+.+++||+.+++. ...+. |...|.+++|+ ++.+++++ ++.|++||+.+++......+|...+..+
T Consensus 195 -Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~v 271 (588)
T 2j04_A 195 -LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHII 271 (588)
T ss_dssp -EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEE
T ss_pred -EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEE
Confidence 66666699999999988774 34553 66889999999 77888887 6999999999877644444799999999
Q ss_pred EEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEccCccCCCceeeeecC
Q psy7482 233 VFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSATN 312 (327)
Q Consensus 233 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~ 312 (327)
+|..+|++..++++++||. ++|... .++++|.-.++++.|+++++|+...+ ... ...
T Consensus 272 a~~~s~d~~~La~a~edG~-klw~~d----------------~~~~spd~~l~a~~d~~v~lW~~~g~---~l~---~~~ 328 (588)
T 2j04_A 272 PLNHEKESTILLMSNKTSY-KVLLED----------------ELHVTADNIIAPYLEKKFKKWSTIWN---EFN---NYE 328 (588)
T ss_dssp EETTCSSCEEEEECSSCEE-EEEESS----------------SEEEECCCSSHHHHHHHHHHTTTTTT---SSS---SSC
T ss_pred EeeeCCCCCEEEEEcCCCC-EEEeec----------------cEEECCCceEEEEcCCEEEEEECCCC---cee---eec
Confidence 9911289999999999999 999976 25577733333335899999987655 211 233
Q ss_pred CCCceEEEEeCCCC
Q psy7482 313 DGCRFTCLAIRPPV 326 (327)
Q Consensus 313 ~~~~i~~l~~~p~~ 326 (327)
....|.+++|+|+-
T Consensus 329 ~~~~I~~va~SPdG 342 (588)
T 2j04_A 329 TTLVIHGISLSPDG 342 (588)
T ss_dssp CEEEEEEEEECTTS
T ss_pred cceEEEEEEECCCC
Confidence 35568899999974
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=8.1e-33 Score=231.72 Aligned_cols=275 Identities=11% Similarity=0.140 Sum_probs=224.0
Q ss_pred cCCccEEEEEe--CCCEE-EEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCe
Q psy7482 12 SHTASVRSVAA--TSKLA-ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQ 87 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l-~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~ 87 (327)
+| ..+.+++| +++++ ++++.|+.|++||+.+++.+..+..+. .+.+++|+|++++|+ +++.++.|++||+.+++
T Consensus 30 ~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~ 107 (391)
T 1l0q_A 30 VG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT 107 (391)
T ss_dssp CS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCe
Confidence 44 45899999 78766 677799999999999999888887655 899999999999875 55567999999999999
Q ss_pred EEEeEEecccCCceeeEEEecCCCEE-EEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE-eec-
Q psy7482 88 LEKLFKKAHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA-IPI- 164 (327)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~- 164 (327)
....+ .. ... +.+++|+|+++.+ ++++.++.|++||+.+++....+..... +.+++|+|+++.++ ++.
T Consensus 108 ~~~~~-~~-~~~-~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 108 VAGTV-KT-GKS-PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS------PKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp EEEEE-EC-SSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS------EEEEEECTTSSEEEEEETT
T ss_pred EEEEE-eC-CCC-cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC------cceEEECCCCCEEEEEeCC
Confidence 88777 33 334 8999999999977 6777899999999999887766655433 78999999998774 444
Q ss_pred CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeC---CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCC
Q psy7482 165 QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGN---EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE 240 (327)
Q Consensus 165 ~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~ 240 (327)
++.|++||+++++....+.+...+.+++|+|+ .++++++ .++.|++||+++++.+..+..|.. +.+++|+ |++
T Consensus 179 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s--~dg 255 (391)
T 1l0q_A 179 SMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVT--PDG 255 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEEEEC--TTS
T ss_pred CCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEEEEc--cCC
Confidence 89999999999999888888889999999998 6777776 689999999999998888887654 7888984 899
Q ss_pred cEE-EEecCCCeEEEEEcCCCceeEEeecccCceE---EEe------------eeC------------cEEEEEecCCcE
Q psy7482 241 TTV-CTGNEESAITAYNLTDGSHLWHIKASASRIK---GLA------------SHR------------NHLICITSAGDL 292 (327)
Q Consensus 241 ~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~---~~~------------~~~------------~~l~~~~~dg~v 292 (327)
+++ ++++.|+.|++||+.+++.+..+..|..+.. .+. |+. -.+...+.|..+
T Consensus 256 ~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (391)
T 1l0q_A 256 KKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATE 335 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSE
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceE
Confidence 877 6778899999999999999888877654421 011 221 135566678899
Q ss_pred EEEEccCc
Q psy7482 293 VVWELNED 300 (327)
Q Consensus 293 ~iw~~~~~ 300 (327)
++|++..+
T Consensus 336 ~~W~~~~g 343 (391)
T 1l0q_A 336 WKWDFGDG 343 (391)
T ss_dssp EEEECSSS
T ss_pred EEEECCCC
Confidence 99999776
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.9e-34 Score=240.34 Aligned_cols=229 Identities=15% Similarity=0.114 Sum_probs=166.8
Q ss_pred CCCCCeEEEecCCCcEEEEEcCCCeEEEeE----EecccCCceeeEEEec--------CCCEEEEEeCCCCEEEEEcCCC
Q psy7482 63 TPEGSHLISCSDDGSIAIFRVGSWQLEKLF----KKAHKGTAVNHISIHP--------SGKLALSVGKDKTLRTWNLVKG 130 (327)
Q Consensus 63 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~----~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg~i~iwd~~~~ 130 (327)
.+++.+|++++.|++|++||.++++..... ..+|.+. |++++|+| ++++|++++.|++|++||++++
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~-v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNF-VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSC-EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCc-eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 335568999999999999999888654321 1578887 99999998 7889999999999999999877
Q ss_pred ceeeeeeccccCccccceEEEEEccCCc-EEEeec-CCeEEEEEecCCceeeEe--------------------------
Q psy7482 131 RSAYITNLSSYGVGFENLDSVVWSPEGL-LYAIPI-QNKAVVFSVEKAGVLQTL-------------------------- 182 (327)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~~~i~i~d~~~~~~~~~~-------------------------- 182 (327)
......... ..++.+++|+|++. +|++++ |+.|++||+++++.....
T Consensus 177 ~~~~~~~~~-----~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 251 (393)
T 4gq1_A 177 GPILAGYPL-----SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS 251 (393)
T ss_dssp EEEEEEEEC-----SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------
T ss_pred ceeeeecCC-----CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc
Confidence 665443322 23499999999874 677776 999999999887543321
Q ss_pred cCCCceeEEEee-cC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEE------------------EEEecCCCcE
Q psy7482 183 KSESKVHSVCFL-NE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL------------------VFFSIPQETT 242 (327)
Q Consensus 183 ~~~~~i~~~~~~-~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~------------------~~~~s~~~~~ 242 (327)
.+...+.++.|+ |+ ..+++++.|+.+++||+..++....+..|...+..+ .+++..++.+
T Consensus 252 ~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 252 GIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF 331 (393)
T ss_dssp CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEE
T ss_pred cccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEE
Confidence 145678889987 56 789999999999999998877666655554443332 3333235667
Q ss_pred EEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482 243 VCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELN 298 (327)
Q Consensus 243 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~ 298 (327)
+++|+.||.|++||+.+++....+..|..+|++++|+| ++||+++.+| +.+|++.
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 88899999999999999999988899999999999999 8999998665 6666654
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=6.7e-35 Score=244.21 Aligned_cols=230 Identities=13% Similarity=0.083 Sum_probs=173.1
Q ss_pred CCCEEEEecCCCeEEEEEcccccc-----ccccccccccEEEEEECC--------CCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQ-----SGALMQHEGTITCLKFTP--------EGSHLISCSDDGSIAIFRVGSWQLE 89 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~-----~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~iw~~~~~~~~ 89 (327)
++.+||+|+.|++|+|||..+++. +..+.+|.+.|++++|+| ++++||+|+.|++|+|||+.++...
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 556899999999999999987753 456789999999999998 7899999999999999999888877
Q ss_pred EeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeeeeecc--------------------ccCccccce
Q psy7482 90 KLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITNLS--------------------SYGVGFENL 148 (327)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------------~~~~~~~~v 148 (327)
..+ ..|... +.+++|+|++ .+|++++.||.|++||+++++........ ....+...+
T Consensus 180 ~~~-~~~~~~-v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 180 LAG-YPLSSP-GISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp EEE-EECSSC-EEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred eee-cCCCCC-cEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 777 677777 9999999977 47999999999999999887643322110 012344568
Q ss_pred EEEEEc-cCCcEEEeec-CCeEEEEEecCCceeeEec-CCCc------------------eeEEEeecC--c-eEEEeCC
Q psy7482 149 DSVVWS-PEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESK------------------VHSVCFLNE--T-TVCTGNE 204 (327)
Q Consensus 149 ~~~~~~-~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~------------------i~~~~~~~~--~-~l~~~~~ 204 (327)
.++.|+ |+++.+++++ |+.+++||+..++....+. +... .....++|. + ++++|+.
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~ 337 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ 337 (393)
T ss_dssp SEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT
T ss_pred eeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC
Confidence 888886 7899998887 9999999998776554443 2222 222334442 3 5677889
Q ss_pred CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482 205 ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNL 257 (327)
Q Consensus 205 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~ 257 (327)
||.|++||+.+++....+..|..+|.+++|+ |+|++||+++.+| +.+|.+
T Consensus 338 Dg~V~lwd~~~~~~~~~~~~~~~~V~svafs--pdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIPIQLGMPIVDFCWH--QDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TTEEEEEETTCTTCCEEEEECSSCEEEEEEC--TTSSEEEEEESSE-EEEEEE
T ss_pred CCEEEEEECCCCcEEEEecCCCCcEEEEEEc--CCCCEEEEEeCCC-eEEEEE
Confidence 9999999999999988888899999999995 9999999998766 555554
No 122
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.7e-33 Score=230.59 Aligned_cols=267 Identities=15% Similarity=0.184 Sum_probs=189.9
Q ss_pred cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC----eEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCC
Q psy7482 48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW----QLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKT 121 (327)
Q Consensus 48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~ 121 (327)
..+.+|.+.|++++|+|++++|++|+.||.|++||+.++ +....+ .+|... |.+++|+| ++++|++++.||.
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSW-RAHDSS-IVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEE-ECCSSC-EEEEEECCGGGCSEEEEEETTSC
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceeccee-ccCCCc-EEEEEEcCCCCCCEEEEEcCCCe
Confidence 346789999999999999999999999999999999876 455555 678777 99999999 6999999999999
Q ss_pred EEEEEcCCCcee-------eeeeccccCccccceEEEEEccC--CcEEEeec-CCeEEEEEecCCceeeEe---------
Q psy7482 122 LRTWNLVKGRSA-------YITNLSSYGVGFENLDSVVWSPE--GLLYAIPI-QNKAVVFSVEKAGVLQTL--------- 182 (327)
Q Consensus 122 i~iwd~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~d~~~~~~~~~~--------- 182 (327)
|++||+++++.. ..... ..+...+.+++|+|+ +.++++++ |+.|++||+++++.+..+
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTL---NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred EEEEecCCCcccccccCcceeeee---cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 999999886421 11112 223456999999999 99888887 999999999887754432
Q ss_pred -----cCCCceeEEEeecC----ceEEEeCCCCcEEEEEcCCCce--eEEeeecccceEEEEEEecCCC----cEEEEec
Q psy7482 183 -----KSESKVHSVCFLNE----TTVCTGNEESAITAYNLTDGSH--LWQIKASASRIKGLVFFSIPQE----TTVCTGN 247 (327)
Q Consensus 183 -----~~~~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~----~~l~~~~ 247 (327)
.+...+.+++|+|+ ..+++++.++.+.+|+...++. +..+.+|...|.+++|+ |++ ++|++++
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~--p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWA--PSIGRWYQLIATGC 237 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEEC--CCSSCSSEEEEEEE
T ss_pred ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEEC--CCCCCcceEEEEEc
Confidence 25678999999984 6899999999998888877765 67778899999999995 787 8999999
Q ss_pred CCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEe----cCCcEEEEEccCccCCCceeee-ecCCCCceEEE
Q psy7482 248 EESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICIT----SAGDLVVWELNEDVTREPQRVS-ATNDGCRFTCL 320 (327)
Q Consensus 248 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~----~dg~v~iw~~~~~~~~~~~~~~-~~~~~~~i~~l 320 (327)
.||.|++||++++........+..........+ ..+..+. ....+.+|+.... ..+. ...|...|+++
T Consensus 238 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~ 312 (351)
T 3f3f_A 238 KDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV-----ELLSEHDDHNGEVWSV 312 (351)
T ss_dssp TTSCEEEEEEEECC---------------------------------------CCSEEE-----EEEEEECTTSSCEEEE
T ss_pred CCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc-----cEEEEEecccccEEEE
Confidence 999999999988765554444433333333433 3333333 2333445544333 2222 23477889999
Q ss_pred EeCCCC
Q psy7482 321 AIRPPV 326 (327)
Q Consensus 321 ~~~p~~ 326 (327)
+|+|+.
T Consensus 313 ~~s~~~ 318 (351)
T 3f3f_A 313 SWNLTG 318 (351)
T ss_dssp EECSSS
T ss_pred EEcCCC
Confidence 999973
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.9e-32 Score=230.01 Aligned_cols=276 Identities=14% Similarity=0.103 Sum_probs=218.1
Q ss_pred eEEEEEcccc--ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE----ecccCCceeeEEEec
Q psy7482 35 TVVLYDMVKR--KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK----KAHKGTAVNHISIHP 108 (327)
Q Consensus 35 ~v~~w~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~----~~~~~~~v~~~~~~~ 108 (327)
.|..+|..++ +.+..+..+ ..+.+++|+|++.++++++.++.|++||+.+++...... ..|... |.+++|++
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~-v~~~~~~~ 179 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGF-VETISIPE 179 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCE-EEEEEEGG
T ss_pred EEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCc-eeEEEEcC
Confidence 4444444334 445555544 346699999988888888889999999999988876431 345555 99999999
Q ss_pred CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE-eec-CCeEEEEEecCCceeeEecCCC
Q psy7482 109 SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA-IPI-QNKAVVFSVEKAGVLQTLKSES 186 (327)
Q Consensus 109 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-~~~i~i~d~~~~~~~~~~~~~~ 186 (327)
+++++++++.|+.|++||+++++....+... ...+.+++|+|+++.++ ++. ++.|++||+++++.+..+....
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 254 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKTLAYKATVDLT-----GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG 254 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTTCCEEEEEECS-----SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS
T ss_pred CCEEEEEECCCCEEEEEECCCceEEEEEcCC-----CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC
Confidence 9999999999999999999988877665432 23499999999998774 453 8999999999999988888778
Q ss_pred ceeEEEeecC-ceEEEeC--------CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcE-EEEecCCCeEEEEE
Q psy7482 187 KVHSVCFLNE-TTVCTGN--------EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETT-VCTGNEESAITAYN 256 (327)
Q Consensus 187 ~i~~~~~~~~-~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~-l~~~~~d~~i~i~d 256 (327)
.+.+++|+|+ +.+++++ .|+.|++||+++++.+..+ .|...+..++|. |+++. +++++.|+.|++||
T Consensus 255 ~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~--~~g~~l~~~~~~~~~v~v~d 331 (433)
T 3bws_A 255 LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSG--NTENKIYVSDMCCSKIEVYD 331 (433)
T ss_dssp EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEEC--SSTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEEC--CCCCEEEEEecCCCEEEEEE
Confidence 8999999999 5777776 5889999999988876665 455678899994 88864 56778999999999
Q ss_pred cCCCceeEEeecccCceEEEeeeC--cEEEEEec---------------CCcEEEEEccCccCCCceeeeecCCCCceEE
Q psy7482 257 LTDGSHLWHIKASASRIKGLASHR--NHLICITS---------------AGDLVVWELNEDVTREPQRVSATNDGCRFTC 319 (327)
Q Consensus 257 ~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~---------------dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~ 319 (327)
+.+++.+..+. +...+.+++|+| +++++++. ||.|++||+.++ ..+........+.+
T Consensus 332 ~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~-----~~~~~~~~~~~~~~ 405 (433)
T 3bws_A 332 LKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD-----TVKEFWEAGNQPTG 405 (433)
T ss_dssp TTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT-----EEEEEEECSSSEEE
T ss_pred CCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC-----cEEEEecCCCCCce
Confidence 99998887776 667899999999 67777776 579999999887 22233334567999
Q ss_pred EEeCCCC
Q psy7482 320 LAIRPPV 326 (327)
Q Consensus 320 l~~~p~~ 326 (327)
++|+|+.
T Consensus 406 ~~~s~dg 412 (433)
T 3bws_A 406 LDVSPDN 412 (433)
T ss_dssp EEECTTS
T ss_pred EEEcCCC
Confidence 9999973
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-34 Score=234.27 Aligned_cols=227 Identities=9% Similarity=0.084 Sum_probs=184.8
Q ss_pred EEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC---------C
Q psy7482 60 LKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK---------G 130 (327)
Q Consensus 60 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~ 130 (327)
..+.+++.+|++|+.||.|++||+.+++.+..+ . ... |.++.|+|+ +++++.|+.|++|+... +
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~-~--~~~-v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTI-T--TPN-PRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEE-E--EEC-CCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEE-e--cCC-ceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc
Confidence 344567889999999999999999999988887 3 334 888899988 99999999999997763 2
Q ss_pred ceeeeeeccccCccccceEEEEEcc--CCcEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeecC-ceEEEeCC
Q psy7482 131 RSAYITNLSSYGVGFENLDSVVWSP--EGLLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-TTVCTGNE 204 (327)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~~~~~ 204 (327)
+.+..... .+..+|.+++|+| +++++++++ |+.|++||+++++...... +...+.+++|+|+ .++++|+.
T Consensus 115 ~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 115 KVLREIEV----DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP 190 (343)
T ss_dssp CEEEEEEC----CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT
T ss_pred ceeEEeec----CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC
Confidence 22222221 1234699999999 999999887 9999999999999877664 5567999999999 78889999
Q ss_pred CCcEEEEEcCCCcee-EEeee-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec---ccCceE--EEe
Q psy7482 205 ESAITAYNLTDGSHL-WQIKA-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA---SASRIK--GLA 277 (327)
Q Consensus 205 d~~i~i~d~~~~~~~-~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~--~~~ 277 (327)
||.|++||+++++.+ ..+.. |..+|.+++|+ |++.+|++++ |+.|++||+++++.+..+.. |...+. +++
T Consensus 191 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs--~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T 3lrv_A 191 DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFA--DNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYD 267 (343)
T ss_dssp TSCEEEEESSCTTSCCEECCCCTTSCEEEEEEC--TTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEE
T ss_pred CCEEEEEECCCCCCCccEEeccCCCCEEEEEEe--CCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEE
Confidence 999999999999887 78888 99999999995 9999999999 55999999999887655543 444444 599
Q ss_pred eeC--cEEEEEec-CCcEEEEEccCc
Q psy7482 278 SHR--NHLICITS-AGDLVVWELNED 300 (327)
Q Consensus 278 ~~~--~~l~~~~~-dg~v~iw~~~~~ 300 (327)
|+| ++|++++. |+.+++|++...
T Consensus 268 ~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 268 IDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEecCCCCcEEEEEEccc
Confidence 999 89999888 999999999765
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=8.3e-33 Score=219.44 Aligned_cols=259 Identities=12% Similarity=0.091 Sum_probs=183.9
Q ss_pred EEEEecCCCeEEEEEcccc---ccccccccccccEEEEEECCCCCeEE-Ee-cCCCcEEEEEcC--CC--e-EEEeEEec
Q psy7482 26 LAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTPEGSHLI-SC-SDDGSIAIFRVG--SW--Q-LEKLFKKA 95 (327)
Q Consensus 26 ~l~~~~~dg~v~~w~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~~d~~i~iw~~~--~~--~-~~~~~~~~ 95 (327)
-+++++ +..|++|+..++ +.++++..|+.+|..+.+.||..-|+ ++ +.-..-.++-+. .. . .......+
T Consensus 56 ~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g 134 (356)
T 2w18_A 56 CIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG 134 (356)
T ss_dssp EEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE
T ss_pred EEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC
Confidence 466666 668999999998 88999999999999999999654332 22 111111222221 10 0 11111123
Q ss_pred ccCCceeeEEEecCCCEEEEEe--CCCCEEEEEcC-CCceeeeeeccccCccccceEEEEEcc---CCcEEEeec-CCeE
Q psy7482 96 HKGTAVNHISIHPSGKLALSVG--KDKTLRTWNLV-KGRSAYITNLSSYGVGFENLDSVVWSP---EGLLYAIPI-QNKA 168 (327)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~-~~~i 168 (327)
+... |..+ ++++++.+++ .|+.|++|++. +++.+.....+.. .+..++|+| ++.+|++++ |++|
T Consensus 135 ~~~~-v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~-----~v~~l~fs~~~g~~~~LaSgS~D~TI 205 (356)
T 2w18_A 135 NIKA-VLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPP-----EETILTFAEVQGMQEALLGTTIMNNI 205 (356)
T ss_dssp EEEE-EEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCC-----SSCEEEEEEEETSTTEEEEEETTSEE
T ss_pred CeEE-EEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCC-----ceeeEEeeccCCCCceEEEecCCCcE
Confidence 3333 5443 5666555543 58999999994 4666555544443 377888888 778999987 9999
Q ss_pred EEEEecCCceeeEec-CC---CceeEEEeecCc-eE------------EEeCCCCcEEEEEcCCCceeEEe-----eecc
Q psy7482 169 VVFSVEKAGVLQTLK-SE---SKVHSVCFLNET-TV------------CTGNEESAITAYNLTDGSHLWQI-----KASA 226 (327)
Q Consensus 169 ~i~d~~~~~~~~~~~-~~---~~i~~~~~~~~~-~l------------~~~~~d~~i~i~d~~~~~~~~~~-----~~~~ 226 (327)
++||+++++.++++. +. ..+.+++|+|++ ++ ++|+.|++|++||..+++.+..+ .+|.
T Consensus 206 kIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~ 285 (356)
T 2w18_A 206 VIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQA 285 (356)
T ss_dssp EEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCC
T ss_pred EEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCc
Confidence 999999999999997 32 357778999984 33 56789999999999999887655 3555
Q ss_pred cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceE-EEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482 227 SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIK-GLASHR--NHLICITSAGDLVVWELN 298 (327)
Q Consensus 227 ~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~~~--~~l~~~~~dg~v~iw~~~ 298 (327)
..+.+..+ ++.++++++.|++|+|||+.+++++.++.+|...+. .++|+| ++|++|+.|++|+|||+.
T Consensus 286 ~~~lsg~~----sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 286 GRFLEGDV----KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp CCEEEEEE----ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred ceeEcccc----CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 55443333 478899999999999999999999999999987665 589999 899999999999999963
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=4.3e-32 Score=228.45 Aligned_cols=293 Identities=11% Similarity=0.079 Sum_probs=222.0
Q ss_pred ccEEEEEe---CCCEEEEec----CCC----eEEEEEc--cccccc--cccccccccEEEEEECC--------------C
Q psy7482 15 ASVRSVAA---TSKLAASSG----ADE----TVVLYDM--VKRKQS--GALMQHEGTITCLKFTP--------------E 65 (327)
Q Consensus 15 ~~v~~~~~---~~~~l~~~~----~dg----~v~~w~~--~~~~~~--~~~~~~~~~v~~~~~~~--------------~ 65 (327)
..+....| ..+++++|+ .|| .++|||+ .+++.+ ..+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 35555666 345677776 567 8999999 888876 45778888887777664 1
Q ss_pred CCeEEEecCC------CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC---CEEEEEcCCCceeeee
Q psy7482 66 GSHLISCSDD------GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK---TLRTWNLVKGRSAYIT 136 (327)
Q Consensus 66 ~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~ 136 (327)
+..++.++.+ +.|++||+.. .....+ ..|... +.+++|+|+|+.|++++.++ .|++||+++++.....
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l-~~~~~~-v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVV-HRSPQP-LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEE-EEESSC-EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC-CCCEEE-eCCCCc-ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee
Confidence 5566665554 7999999975 445556 567766 99999999999999999875 9999999988765433
Q ss_pred eccccCccccceEEEEEccCCcEEE-eec-C--CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCC-CC--cE
Q psy7482 137 NLSSYGVGFENLDSVVWSPEGLLYA-IPI-Q--NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNE-ES--AI 208 (327)
Q Consensus 137 ~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-~--~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~-d~--~i 208 (327)
... ..+.+++|+|+|+.|+ +++ + ..|++||+.+++......+...+.+++|+|| ..|++++. ++ .|
T Consensus 220 ~~~------~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i 293 (415)
T 2hqs_A 220 SFP------RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQV 293 (415)
T ss_dssp CCS------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred cCC------CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEE
Confidence 222 2489999999999877 444 4 4599999998877544447788999999999 56776665 44 67
Q ss_pred EEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC---CeEEEEEcCCCceeEEeecccCceEEEeeeC--cEE
Q psy7482 209 TAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE---SAITAYNLTDGSHLWHIKASASRIKGLASHR--NHL 283 (327)
Q Consensus 209 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l 283 (327)
++||+.+++. ..+..+...+..++| +|+|++|++++.+ ..|++||+.+++.. .+..+. .+.+++|+| ++|
T Consensus 294 ~~~d~~~~~~-~~l~~~~~~~~~~~~--spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l 368 (415)
T 2hqs_A 294 YKVNINGGAP-QRITWEGSQNQDADV--SSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMV 368 (415)
T ss_dssp EEEETTSSCC-EECCCSSSEEEEEEE--CTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEE
T ss_pred EEEECCCCCE-EEEecCCCcccCeEE--CCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEE
Confidence 7889887764 445556778889999 5999999988764 58999999988764 455554 899999999 788
Q ss_pred EEEecCC---cEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 284 ICITSAG---DLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 284 ~~~~~dg---~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
++++.++ .|++||+... ....+ ..+...|.+++|+|..
T Consensus 369 ~~~s~~~~~~~l~~~d~~g~---~~~~l--~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 369 IYSSSQGMGSVLNLVSTDGR---FKARL--PATDGQVKFPAWSPYL 409 (415)
T ss_dssp EEEEEETTEEEEEEEETTSC---CEEEC--CCSSSEEEEEEECCCC
T ss_pred EEEEcCCCccEEEEEECCCC---cEEEe--eCCCCCCcCCcccccc
Confidence 8888777 7999999765 33333 3466789999999975
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=7.1e-31 Score=227.50 Aligned_cols=298 Identities=10% Similarity=0.073 Sum_probs=234.9
Q ss_pred EEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc--CCCeEEEeEEeccc
Q psy7482 20 VAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV--GSWQLEKLFKKAHK 97 (327)
Q Consensus 20 ~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~--~~~~~~~~~~~~~~ 97 (327)
+..++.++++++.|++|.+||..+++++.++..+.. +..++|+|+|++|++++.|+.|.+||+ .+++.+..+ . +.
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i-~-~g 221 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI-K-IG 221 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE-E-CC
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE-e-cC
Confidence 334788899999999999999999999988884333 889999999999999999999999999 888888887 3 23
Q ss_pred CCceeeEEEec----CCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccC-----cc-ccceEEEEEccCCcEEEee-c-
Q psy7482 98 GTAVNHISIHP----SGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYG-----VG-FENLDSVVWSPEGLLYAIP-I- 164 (327)
Q Consensus 98 ~~~v~~~~~~~----~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~-----~~-~~~v~~~~~~~~~~~l~~~-~- 164 (327)
.. +..++|+| +|+++++++. +++|.+||..+++.+..+...... .+ ...+..+.++|++..++++ .
T Consensus 222 ~~-p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 222 IE-ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp SE-EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CC-cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 33 89999999 9999999885 899999999999888776653210 01 1248899999988766555 3
Q ss_pred CCeEEEEEecCCceee--EecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCCCceeEEeee----cccceEEEEEEe
Q psy7482 165 QNKAVVFSVEKAGVLQ--TLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTDGSHLWQIKA----SASRIKGLVFFS 236 (327)
Q Consensus 165 ~~~i~i~d~~~~~~~~--~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~ 236 (327)
++.|.+||..+.+.+. .+.+...+..+.|+|+ ++++ ++..+++|.+||..+++.+..+.. |.+.... |.
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~--~~- 377 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN--FV- 377 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE--EE-
T ss_pred CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc--cC-
Confidence 8999999998876554 5556777889999999 5554 455789999999999998888764 5433333 32
Q ss_pred cCC-CcEEEEec-CCCeEEEEEcCC-------CceeEEeecccCceEEEeeeC--cEEEEEe-------cCCcEEEEEcc
Q psy7482 237 IPQ-ETTVCTGN-EESAITAYNLTD-------GSHLWHIKASASRIKGLASHR--NHLICIT-------SAGDLVVWELN 298 (327)
Q Consensus 237 s~~-~~~l~~~~-~d~~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-------~dg~v~iw~~~ 298 (327)
+|+ +..++++. .|++|.+||+.+ .+.+.++..|...+..++++| ++|++++ .+++|.+||+.
T Consensus 378 ~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 378 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred CCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence 276 66677765 689999999988 889999999988899999999 8888887 37899999999
Q ss_pred CccCCCc-eeeee------cCCCCceEEEEeCCCC
Q psy7482 299 EDVTREP-QRVSA------TNDGCRFTCLAIRPPV 326 (327)
Q Consensus 299 ~~~~~~~-~~~~~------~~~~~~i~~l~~~p~~ 326 (327)
+.. .. ..+.. ..++.++..++|+|+.
T Consensus 458 ~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g 490 (543)
T 1nir_A 458 NLD--AKYQVLPIAEWADLGEGAKRVVQPEYNKRG 490 (543)
T ss_dssp CTT--SCCEEECHHHHHCCCSSCCEEEEEEECSSS
T ss_pred CCC--CCeEEeechhhcccCCCCCceEeccCCCCC
Confidence 884 22 22211 2446789999999873
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.3e-30 Score=206.96 Aligned_cols=242 Identities=10% Similarity=0.077 Sum_probs=168.8
Q ss_pred EeeeeccCCccEEEEEe---CCCEEEEecCC-CeEEEEEc--ccc----ccccccccccccEEEEEECCCCCeEEEec--
Q psy7482 6 QTFVTHSHTASVRSVAA---TSKLAASSGAD-ETVVLYDM--VKR----KQSGALMQHEGTITCLKFTPEGSHLISCS-- 73 (327)
Q Consensus 6 ~~~~~~~h~~~v~~~~~---~~~~l~~~~~d-g~v~~w~~--~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-- 73 (327)
+.+..++|+.+|..+.+ ..+++..+-.+ ..-.++-+ ... .....-.+|...|..+ ++++++.+++
T Consensus 78 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g 154 (356)
T 2w18_A 78 KLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTL 154 (356)
T ss_dssp EEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSS
T ss_pred eeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccC
Confidence 34444589999999998 22333322211 11111111 111 1111112344445544 5666666643
Q ss_pred CCCcEEEEEc-CCCeEEEeEEecccCCceeeEEEec---CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482 74 DDGSIAIFRV-GSWQLEKLFKKAHKGTAVNHISIHP---SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLD 149 (327)
Q Consensus 74 ~d~~i~iw~~-~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 149 (327)
.|+.|++|++ .+++.+..+ ..|... +..++|++ ++.+|++++.|++|++||+++++.+..+..... +...+.
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~-~~~~~~-v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~--~v~~v~ 230 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQ-FLMPPE-ETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS--YQASVC 230 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEE-EECCCS-SCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-----CCCE
T ss_pred CCCcEEEEEECCCCceeeee-ccCCCc-eeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc--ceeeeE
Confidence 6999999999 558877777 678777 99999999 779999999999999999999998877653221 123488
Q ss_pred EEEEccCCcEEE------------eec-CCeEEEEEecCCceeeEec------CCCceeEEEeecCceEEEeCCCCcEEE
Q psy7482 150 SVVWSPEGLLYA------------IPI-QNKAVVFSVEKAGVLQTLK------SESKVHSVCFLNETTVCTGNEESAITA 210 (327)
Q Consensus 150 ~~~~~~~~~~l~------------~~~-~~~i~i~d~~~~~~~~~~~------~~~~i~~~~~~~~~~l~~~~~d~~i~i 210 (327)
+++|+|++++++ +|+ |+++++||..+++.+..+. |...+.+..++ ...+++++.|++|++
T Consensus 231 ~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s-g~~lASgS~DgTIkI 309 (356)
T 2w18_A 231 HKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK-DHCAAAILTSGTIAI 309 (356)
T ss_dssp EEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE-TTEEEEEETTSCEEE
T ss_pred EEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC-CCEEEEEcCCCcEEE
Confidence 889999998763 455 8999999999998876652 33334433333 367899999999999
Q ss_pred EEcCCCceeEEeeecccceE-EEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482 211 YNLTDGSHLWQIKASASRIK-GLVFFSIPQETTVCTGNEESAITAYNL 257 (327)
Q Consensus 211 ~d~~~~~~~~~~~~~~~~v~-~~~~~~s~~~~~l~~~~~d~~i~i~d~ 257 (327)
||+.+++.+.++++|...+. .++| +|+|++|++|+.|++|+|||+
T Consensus 310 WDl~tGk~l~tL~gH~~~vvs~vaf--SPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 310 WDLLLGQCTALLPPVSDQHWSFVKW--SGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EETTTCSEEEEECCC--CCCCEEEE--CSSSSEEEEECTTSCEEEEEE
T ss_pred EECCCCcEEEEecCCCCCeEEEEEE--CCCCCEEEEEECCCcEEEecC
Confidence 99999999999999987665 5889 499999999999999999995
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=2.6e-30 Score=217.65 Aligned_cols=256 Identities=12% Similarity=0.109 Sum_probs=200.5
Q ss_pred eccCCccEEEEEeC----------------CCEEEEecCC------CeEEEEEccccccccccccccccEEEEEECCCCC
Q psy7482 10 THSHTASVRSVAAT----------------SKLAASSGAD------ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS 67 (327)
Q Consensus 10 ~~~h~~~v~~~~~~----------------~~~l~~~~~d------g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 67 (327)
+.+|...+..+++. +..++.++.+ +.|++||+. +.....+.+|...+.+++|+|+|+
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~ 191 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGS 191 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSS
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCC
Confidence 45677666666552 6677766654 799999997 555677888999999999999999
Q ss_pred eEEEecCCC---cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEE-EEeCCCC--EEEEEcCCCceeeeeecccc
Q psy7482 68 HLISCSDDG---SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLAL-SVGKDKT--LRTWNLVKGRSAYITNLSSY 141 (327)
Q Consensus 68 ~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~ 141 (327)
+|++++.++ .|++||+.+++... + ..+... +.+++|+|+|+.|+ +++.++. |++||+.+++..... ..
T Consensus 192 ~la~~s~~~~~~~i~~~d~~tg~~~~-l-~~~~~~-~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~---~~ 265 (415)
T 2hqs_A 192 KLAYVTFESGRSALVIQTLANGAVRQ-V-ASFPRH-NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT---DG 265 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEEE-E-ECCSSC-EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECC---CC
T ss_pred EEEEEEecCCCcEEEEEECCCCcEEE-e-ecCCCc-ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCc---CC
Confidence 999998875 99999999887754 4 456666 99999999999887 6666655 999999887653222 11
Q ss_pred CccccceEEEEEccCCcEEEeec--CC--eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCC---CcEEEEEc
Q psy7482 142 GVGFENLDSVVWSPEGLLYAIPI--QN--KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEE---SAITAYNL 213 (327)
Q Consensus 142 ~~~~~~v~~~~~~~~~~~l~~~~--~~--~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d---~~i~i~d~ 213 (327)
...+.+++|+|+|+.|+.++ ++ .|++||+.+++......+...+.+++|+|+ .+|++++.+ ..|++||+
T Consensus 266 ---~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 266 ---RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp ---SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred ---CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 23489999999999888776 34 788889988775443346678899999999 667766653 58999999
Q ss_pred CCCceeEEeeecccceEEEEEEecCCCcEEEEecCCC---eEEEEEcCCCceeEEeecccCceEEEeeeC
Q psy7482 214 TDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEES---AITAYNLTDGSHLWHIKASASRIKGLASHR 280 (327)
Q Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 280 (327)
.+++. ..+..+. .+.+++| +|+|++|++++.++ .|++||+. +.....+..|.+.|.+++|+|
T Consensus 343 ~~~~~-~~l~~~~-~~~~~~~--spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~ 407 (415)
T 2hqs_A 343 ATGGV-QVLSSTF-LDETPSL--APNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSP 407 (415)
T ss_dssp TTCCE-EECCCSS-SCEEEEE--CTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECC
T ss_pred CCCCE-EEecCCC-CcCCeEE--cCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccc
Confidence 98876 3455554 7899999 49999999888776 79999986 566788899999999999999
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.98 E-value=1.4e-28 Score=213.15 Aligned_cols=276 Identities=10% Similarity=0.095 Sum_probs=218.1
Q ss_pred EEEEEe--CCCEEEEecCCCeEEEEEc--cccccccccccccccEEEEEECC----CCCeEEEecC-CCcEEEEEcCCCe
Q psy7482 17 VRSVAA--TSKLAASSGADETVVLYDM--VKRKQSGALMQHEGTITCLKFTP----EGSHLISCSD-DGSIAIFRVGSWQ 87 (327)
Q Consensus 17 v~~~~~--~~~~l~~~~~dg~v~~w~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-d~~i~iw~~~~~~ 87 (327)
+.+++| ++++|++++.|++|++||+ .+++.+.++. +...+..++|+| +|++|++++. +++|.+||..+++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 778888 9999999999999999999 8888888887 455689999999 9999999885 8999999999999
Q ss_pred EEEeEEec---------ccCCceeeEEEecCCCE-EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482 88 LEKLFKKA---------HKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG 157 (327)
Q Consensus 88 ~~~~~~~~---------~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (327)
++..+... |....+..+.++|++.. +++...++.|.+||..+.+.+....... ...+..+.|+|++
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~----~~~~~~~~~spdg 335 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA----APFLHDGGWDSSH 335 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC----CSSCCCEEECTTS
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc----CcCccCceECCCC
Confidence 98887321 23324889999997654 5566678999999998876544222221 1237889999999
Q ss_pred cEEEeec--CCeEEEEEecCCceeeEec-----CCCceeEEEeecC-ce-EEEeC-CCCcEEEEEcCC-------CceeE
Q psy7482 158 LLYAIPI--QNKAVVFSVEKAGVLQTLK-----SESKVHSVCFLNE-TT-VCTGN-EESAITAYNLTD-------GSHLW 220 (327)
Q Consensus 158 ~~l~~~~--~~~i~i~d~~~~~~~~~~~-----~~~~i~~~~~~~~-~~-l~~~~-~d~~i~i~d~~~-------~~~~~ 220 (327)
++++++. +++|.+||..+++.+..+. |.+....+ ++|+ +. ++++. .|++|.+||+.+ .+.++
T Consensus 336 ~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~ 414 (543)
T 1nir_A 336 RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVA 414 (543)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred CEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEE
Confidence 9776553 7899999999999888776 33333333 4676 44 55554 689999999988 88999
Q ss_pred EeeecccceEEEEEEecCCCcEEEEec-------CCCeEEEEEcCCCcee-EEe--------ecccCceEEEeeeC--cE
Q psy7482 221 QIKASASRIKGLVFFSIPQETTVCTGN-------EESAITAYNLTDGSHL-WHI--------KASASRIKGLASHR--NH 282 (327)
Q Consensus 221 ~~~~~~~~v~~~~~~~s~~~~~l~~~~-------~d~~i~i~d~~~~~~~-~~~--------~~~~~~v~~~~~~~--~~ 282 (327)
++..|...+..++++ |++++|++++ .+++|.+||+.+++.. ..+ ..+...+..++|+| +.
T Consensus 415 ~l~~~g~~~~~v~~~--pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~ 492 (543)
T 1nir_A 415 ELQGQGGGSLFIKTH--PKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDE 492 (543)
T ss_dssp EEECSCSCCCCEECC--TTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSE
T ss_pred EEEcCCCCceEEEcC--CCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCE
Confidence 999998888899995 9999999987 2679999999999876 443 34567899999999 66
Q ss_pred EEEEe-----cCCcEEEEEccCc
Q psy7482 283 LICIT-----SAGDLVVWELNED 300 (327)
Q Consensus 283 l~~~~-----~dg~v~iw~~~~~ 300 (327)
++.+. .|+.|.|||..+.
T Consensus 493 ~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 493 VWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp EEEEEECCTTSCCEEEEEETTTT
T ss_pred EEEEeecCCCCCCeEEEEECCCc
Confidence 55542 4799999999998
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.97 E-value=1.2e-28 Score=202.61 Aligned_cols=286 Identities=13% Similarity=0.203 Sum_probs=198.9
Q ss_pred EEEEecCCCeEEEEEcc-cc--ccccccccccccEEEEEECCCCCeEEEecCC-CcEEEEEcC--CCeEE--EeEEeccc
Q psy7482 26 LAASSGADETVVLYDMV-KR--KQSGALMQHEGTITCLKFTPEGSHLISCSDD-GSIAIFRVG--SWQLE--KLFKKAHK 97 (327)
Q Consensus 26 ~l~~~~~dg~v~~w~~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iw~~~--~~~~~--~~~~~~~~ 97 (327)
++++++.|+.|++||+. ++ +.+..+ .+...+.+++|+|++++|++++.+ +.|.+|++. +++.. ..+ .. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~-~ 83 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES-AL-P 83 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE-EC-S
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc-cc-C
Confidence 45555789999999985 23 223333 467789999999999988888876 999999997 55433 333 22 2
Q ss_pred CCceeeEEEecCCCEEEEEeC-CCCEEEEEcCCC---ceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEE
Q psy7482 98 GTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKG---RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVF 171 (327)
Q Consensus 98 ~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~ 171 (327)
.. +..++|+|+++++++++. ++.|.+||+..+ +........ ..+.+++|+|+++.++++. ++.|.+|
T Consensus 84 ~~-~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 156 (343)
T 1ri6_A 84 GS-LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL------DGCHSANISPDNRTLWVPALKQDRICLF 156 (343)
T ss_dssp SC-CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC------TTBCCCEECTTSSEEEEEEGGGTEEEEE
T ss_pred CC-CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC------CCceEEEECCCCCEEEEecCCCCEEEEE
Confidence 34 899999999998877765 788999999533 222222221 2388899999998776664 8999999
Q ss_pred EecC-Cceee----Eec--CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCC--Cce--eEEee---ec---ccceEEE
Q psy7482 172 SVEK-AGVLQ----TLK--SESKVHSVCFLNE-TTV-CTGNEESAITAYNLTD--GSH--LWQIK---AS---ASRIKGL 232 (327)
Q Consensus 172 d~~~-~~~~~----~~~--~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~--~~~--~~~~~---~~---~~~v~~~ 232 (327)
|+.+ ++... .+. ....+..++|+|+ .++ +++..++.+.+|++.. ++. ...+. .. ...+..+
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 157 TVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp EECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred EecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 9987 65432 222 4457889999999 545 4556899999999953 332 22222 11 2245678
Q ss_pred EEEecCCCcEEE-EecCCCeEEEEEcC--C--CceeEEeecccCceEEEeeeC--cEEEEEe-cCCcEEEEEccCccCCC
Q psy7482 233 VFFSIPQETTVC-TGNEESAITAYNLT--D--GSHLWHIKASASRIKGLASHR--NHLICIT-SAGDLVVWELNEDVTRE 304 (327)
Q Consensus 233 ~~~~s~~~~~l~-~~~~d~~i~i~d~~--~--~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-~dg~v~iw~~~~~~~~~ 304 (327)
+| +|++++|+ ++..++.|.+||+. + .+.+..+..+.. +.+++|+| ++|++++ .++.|.+|+++... ..
T Consensus 237 ~~--s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~-g~ 312 (343)
T 1ri6_A 237 HI--TPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQ-GL 312 (343)
T ss_dssp EE--CTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTT-TE
T ss_pred EE--CCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCC-ce
Confidence 88 48998777 55578999999998 2 334555555554 88999999 6677776 68999999776431 03
Q ss_pred ceeeeecCCCCceEEEEeCCC
Q psy7482 305 PQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 305 ~~~~~~~~~~~~i~~l~~~p~ 325 (327)
...+.....+....+++|.|+
T Consensus 313 ~~~~~~~~~g~~p~~i~~~~~ 333 (343)
T 1ri6_A 313 LHEKGRYAVGQGPMWVVVNAH 333 (343)
T ss_dssp EEEEEEEECSSSCCEEEEEEE
T ss_pred eeEccccccCCCCeeEEEEcc
Confidence 344444445566888888875
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=4.9e-28 Score=198.10 Aligned_cols=266 Identities=11% Similarity=0.134 Sum_probs=199.4
Q ss_pred CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC-CCcEEEEEcCCCeE-EEeEEecccCCc
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQL-EKLFKKAHKGTA 100 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~-~~~~~~~~~~~~ 100 (327)
.+..+++++.++.|++||+.+++....+..+...+ .++|+|+++++++++. ++.|.+||..+++. ...+ ..+...
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~- 85 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI-QEGQSS- 85 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE-EECSSC-
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec-ccCCCC-
Confidence 34457788899999999999998888777666667 9999999997766655 88999999999887 5555 444433
Q ss_pred eeeEEEecCCCEEEEEeCCC---CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c-CCe-EEEEEec
Q psy7482 101 VNHISIHPSGKLALSVGKDK---TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I-QNK-AVVFSVE 174 (327)
Q Consensus 101 v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~~-i~i~d~~ 174 (327)
..+++|+|++++++++..++ .|.+||+.+++....+..... ..+++|+|+++.++++ . ++. +.+|++.
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~------~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD------AVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT------EEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC------ccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 44499999999999555543 899999999887766554433 7899999999855554 3 577 9999987
Q ss_pred CCcee-----eEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCce---eEEeeecccceEEEEEEecCCCcEEE
Q psy7482 175 KAGVL-----QTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSH---LWQIKASASRIKGLVFFSIPQETTVC 244 (327)
Q Consensus 175 ~~~~~-----~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~s~~~~~l~ 244 (327)
....+ ..+.....+..++|+|+ ++ ++++..++.|.+||+.+++. +..+..+ ..+..++| +|+|++++
T Consensus 160 ~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~--spdg~~l~ 236 (331)
T 3u4y_A 160 ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVV--SRDGSTVY 236 (331)
T ss_dssp TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEE--CTTSSEEE
T ss_pred CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEE--CCCCCEEE
Confidence 54432 23345567899999999 43 45566789999999999887 7777644 55788999 49999776
Q ss_pred Eec-CCCeEEEEEcCCCce--eEEeecc----cCc---eEEEeeeC--cEEEE-EecCCcEEEEEccCc
Q psy7482 245 TGN-EESAITAYNLTDGSH--LWHIKAS----ASR---IKGLASHR--NHLIC-ITSAGDLVVWELNED 300 (327)
Q Consensus 245 ~~~-~d~~i~i~d~~~~~~--~~~~~~~----~~~---v~~~~~~~--~~l~~-~~~dg~v~iw~~~~~ 300 (327)
+++ .++.|.+||+.+++. +..+..+ ..+ ...++|+| ++|++ +..++.|.+||+...
T Consensus 237 v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp EECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred EEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 554 578899999998876 4443322 222 24589999 55654 455678999999876
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=3.7e-29 Score=226.18 Aligned_cols=301 Identities=12% Similarity=0.153 Sum_probs=222.9
Q ss_pred CccEEEEEe--CCCEEEEecC-CC-----eEEEEEcccccccccccccc------------------------ccEEEEE
Q psy7482 14 TASVRSVAA--TSKLAASSGA-DE-----TVVLYDMVKRKQSGALMQHE------------------------GTITCLK 61 (327)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~-dg-----~v~~w~~~~~~~~~~~~~~~------------------------~~v~~~~ 61 (327)
...+.+++| ||++|++++. |+ .|++||+.+++....+..+. ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456889999 9999999988 88 89999999988766555443 2378999
Q ss_pred ECCCCCeEEEecCCCcEEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc
Q psy7482 62 FTPEGSHLISCSDDGSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS 139 (327)
Q Consensus 62 ~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 139 (327)
|+|||++|++++. +.|++||+.+++ ....+ ..+... +..++|+|||++|++++. +.|++||+.+++........
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l-~~~~~~-~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQL-THGEGF-ATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBC-CCSSSC-EEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEc-ccCCcc-cccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCC
Confidence 9999999998886 899999999872 33344 455555 999999999999998874 68999999887665433221
Q ss_pred ccCc-----------cccceEEEEEccCCcEEEeec-CC---------------------------------eEEEEEec
Q psy7482 140 SYGV-----------GFENLDSVVWSPEGLLYAIPI-QN---------------------------------KAVVFSVE 174 (327)
Q Consensus 140 ~~~~-----------~~~~v~~~~~~~~~~~l~~~~-~~---------------------------------~i~i~d~~ 174 (327)
.... ....+..++|+|||+.|+++. ++ .|.+||+.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 1100 001147899999999888875 44 78899998
Q ss_pred C-CceeeEe---cCCCceeEEEeecC-ceEEEeC-----CCCcEEEEEcCCCceeEEeeeccc----ceEEEEEEecCCC
Q psy7482 175 K-AGVLQTL---KSESKVHSVCFLNE-TTVCTGN-----EESAITAYNLTDGSHLWQIKASAS----RIKGLVFFSIPQE 240 (327)
Q Consensus 175 ~-~~~~~~~---~~~~~i~~~~~~~~-~~l~~~~-----~d~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~s~~~ 240 (327)
+ ++..... .+...+..++| || ..|++++ .+..|++||+.+++....+..+.. .+..++| +|+|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~--spdg 348 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF--LDDG 348 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE--CTTS
T ss_pred CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE--CCCC
Confidence 8 7755443 25567899999 99 6666543 367899999999987776665543 3467888 4999
Q ss_pred cEEEEecCCCeEEEEEcC-CCceeEEeecccCceEEE-eeeC--cEE-EEEecCC--cEEEEEccCccCCCceeeeecCC
Q psy7482 241 TTVCTGNEESAITAYNLT-DGSHLWHIKASASRIKGL-ASHR--NHL-ICITSAG--DLVVWELNEDVTREPQRVSATND 313 (327)
Q Consensus 241 ~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~-~~~~--~~l-~~~~~dg--~v~iw~~~~~~~~~~~~~~~~~~ 313 (327)
+++++++.|+.++||.+. ++. ...+..+...+..+ .|+| +.| ++++.++ .+++|++.... .....+..
T Consensus 349 ~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g-~~~~~l~~--- 423 (741)
T 2ecf_A 349 SILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG-GQPQRLSK--- 423 (741)
T ss_dssp CEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC-CCCEECCC---
T ss_pred eEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC-CCeeeccc---
Confidence 999999999988888765 445 77788888888887 5999 545 5566666 89999997532 12333332
Q ss_pred CCceEEEEeCCCC
Q psy7482 314 GCRFTCLAIRPPV 326 (327)
Q Consensus 314 ~~~i~~l~~~p~~ 326 (327)
...+.+++|+|+.
T Consensus 424 ~~~~~~~~~spdg 436 (741)
T 2ecf_A 424 APGMHSASFARNA 436 (741)
T ss_dssp SCSEEEEEECTTS
T ss_pred CCCceEEEECCCC
Confidence 4457899999873
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.97 E-value=5.4e-28 Score=198.17 Aligned_cols=263 Identities=9% Similarity=0.092 Sum_probs=204.8
Q ss_pred CEEEEecCCCeEEEEEccccccccccccccc--cEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEecc----c
Q psy7482 25 KLAASSGADETVVLYDMVKRKQSGALMQHEG--TITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAH----K 97 (327)
Q Consensus 25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~----~ 97 (327)
+++++++.++.|++||+.+++.+..+..... .+..++|+|+++.+ +++..++.|.+||+.+++....+...+ .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 5789999999999999999988877763221 47889999999766 456668899999999998887773333 1
Q ss_pred CCceeeEEEecCCCEEEEEe------------CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC
Q psy7482 98 GTAVNHISIHPSGKLALSVG------------KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ 165 (327)
Q Consensus 98 ~~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 165 (327)
.. +..++|+|++++++++. .++.|.+||+.+++....+..... +..++|+|+++.++++ +
T Consensus 82 ~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~-~ 153 (337)
T 1pby_B 82 KS-LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ------ITMLAWARDGSKLYGL-G 153 (337)
T ss_dssp EC-TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS------CCCEEECTTSSCEEEE-S
T ss_pred cc-ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC------cceeEECCCCCEEEEe-C
Confidence 13 78899999999998886 579999999998877666554332 7789999999988777 7
Q ss_pred CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeC-CCC-----------------------cEEEEEcCCCcee-
Q psy7482 166 NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGN-EES-----------------------AITAYNLTDGSHL- 219 (327)
Q Consensus 166 ~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~-~d~-----------------------~i~i~d~~~~~~~- 219 (327)
+.|.+||+.+++....+........+.|+|+ ..++..+ .++ .|.+||+.+++..
T Consensus 154 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 233 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM 233 (337)
T ss_dssp SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceE
Confidence 8999999999988877763321123377887 4444333 333 4689999988764
Q ss_pred EEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEc
Q psy7482 220 WQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWEL 297 (327)
Q Consensus 220 ~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~ 297 (327)
..+..+...+..++| +|++++++++ ++.|.+||+.+++.+..+..+ ..+.+++|+| ++|++++.++.|++||+
T Consensus 234 ~~~~~~~~~~~~~~~--s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 234 REVRIMDVFYFSTAV--NPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEEEECSSCEEEEEE--CTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred eecCCCCCceeeEEE--CCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 223455567788999 4999999988 799999999999888777654 4678999999 77888889999999999
Q ss_pred cCc
Q psy7482 298 NED 300 (327)
Q Consensus 298 ~~~ 300 (327)
.+.
T Consensus 309 ~~~ 311 (337)
T 1pby_B 309 ETL 311 (337)
T ss_dssp TTC
T ss_pred cCC
Confidence 887
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.97 E-value=7.5e-28 Score=193.52 Aligned_cols=250 Identities=14% Similarity=0.166 Sum_probs=189.7
Q ss_pred EecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC-CeEEEeEEecccCCceeeEEEe
Q psy7482 29 SSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS-WQLEKLFKKAHKGTAVNHISIH 107 (327)
Q Consensus 29 ~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~v~~~~~~ 107 (327)
.++.|+.|++||+.+++.. .+..|...|.+++|+|++++|++++ ++.|++||+.+ ++..... ..+....+.+++|+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVD-TGFATICNNDHGIS 93 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECC-CTTCCCBCSCCEEC
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEec-cccccccccceEEC
Confidence 4567899999999888765 4556889999999999999999887 78999999998 7776655 45543348999999
Q ss_pred cCCCEEEEEe--CCCCEEEEEc--CCCceeeeeeccccCccccceEEEEEccCCcEEE-eec-CCeEEEEEec--CCcee
Q psy7482 108 PSGKLALSVG--KDKTLRTWNL--VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA-IPI-QNKAVVFSVE--KAGVL 179 (327)
Q Consensus 108 ~~~~~l~~~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-~~~i~i~d~~--~~~~~ 179 (327)
|++++|++++ .++...+|.+ .+++. ..+.... .+..++|+|+++.++ ++. ++.+.+|++. +++..
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~------~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~ 166 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKNL------PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET 166 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSSS------SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecCC------CccceEECCCCCEEEEEECCCCceEEEEEECCCCcce
Confidence 9999999998 3355666654 44432 2221111 288899999999877 444 8888898864 34443
Q ss_pred eEecCCCceeEEEeecC-ceEEEe-CCCCcEEEEEcC-CCceeEEeeecccceEEEEEEecCCCcEEEEecCC-------
Q psy7482 180 QTLKSESKVHSVCFLNE-TTVCTG-NEESAITAYNLT-DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE------- 249 (327)
Q Consensus 180 ~~~~~~~~i~~~~~~~~-~~l~~~-~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d------- 249 (327)
....+...+.+++|+|+ ..++++ ..++.+++|++. .+..+..+..|...+..++| +|++++|++++.+
T Consensus 167 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 167 RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHP--SPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp ECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEE--CTTSSEEEEEEEETTCCSCC
T ss_pred EcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEE--CCCCCEEEEEEcCCCCCccc
Confidence 33347788999999999 555554 468999999986 55667777778888999999 4999999888765
Q ss_pred ----CeEEEEEcCCCce--eEEeecccCceEEEeeeC--cEEEEEecCC
Q psy7482 250 ----SAITAYNLTDGSH--LWHIKASASRIKGLASHR--NHLICITSAG 290 (327)
Q Consensus 250 ----~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~--~~l~~~~~dg 290 (327)
+.|++||+.+++. +..+.+|...+..++|+| +.|++++.+.
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999988865 445557888999999999 7777777653
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=8e-28 Score=216.91 Aligned_cols=305 Identities=12% Similarity=0.117 Sum_probs=212.7
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccc---cEEEEEECCCCCeEEEecCC---------CcEEE
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEG---TITCLKFTPEGSHLISCSDD---------GSIAI 80 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------~~i~i 80 (327)
..+.+++| +|+++++ +.||+|++||+.+++....+..|.. .|.+++|+|||++|++++.+ +.+.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 34667788 8887776 6899999999999988777776664 49999999999999998764 78889
Q ss_pred EEcCCCeEEEeEEe--cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCc----c---------c
Q psy7482 81 FRVGSWQLEKLFKK--AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGV----G---------F 145 (327)
Q Consensus 81 w~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~---------~ 145 (327)
||+.+++. ..+.. .+... +..++|+|||+.|+.++. +.|++||+.+++............ . .
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~-~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAK-LQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCC-CSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred EECCCCce-EeccCCcccccc-ccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEec
Confidence 99998876 33311 22233 788999999999999886 789999999887655443322110 0 0
Q ss_pred cceEEEEEccCCcEEEeec-CC----------------------------------eEEEEEecCCceeeEec-C-----
Q psy7482 146 ENLDSVVWSPEGLLYAIPI-QN----------------------------------KAVVFSVEKAGVLQTLK-S----- 184 (327)
Q Consensus 146 ~~v~~~~~~~~~~~l~~~~-~~----------------------------------~i~i~d~~~~~~~~~~~-~----- 184 (327)
..+.+++|+|||+.|+.+. ++ .|++||+.+++....+. +
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 1247899999999988875 32 79999999887655554 2
Q ss_pred -CCceeEEEeecCc-eEEEeC----CCCcEEEEEcCCCceeEEeeec-ccceE----EEEEEecCCCcEEEE--ecCCC-
Q psy7482 185 -ESKVHSVCFLNET-TVCTGN----EESAITAYNLTDGSHLWQIKAS-ASRIK----GLVFFSIPQETTVCT--GNEES- 250 (327)
Q Consensus 185 -~~~i~~~~~~~~~-~l~~~~----~d~~i~i~d~~~~~~~~~~~~~-~~~v~----~~~~~~s~~~~~l~~--~~~d~- 250 (327)
...+..++|+||+ ++++.. .+..|++||+.+++....+..+ ...+. .++| +|+|+.|+. +..++
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVF--SKDGRKFFFIRAIPQGG 330 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEE--CTTSCSEEEEEEECCSS
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceE--cCCCCeEEEEEecccCC
Confidence 4578899999995 454443 3467999999998876665443 33333 7788 499997775 45666
Q ss_pred -----eEEEEE-cCCCc--eeEEeecccCceEE-EeeeC--cEEEEEecC---CcEEEEEccCccCCCceeeee-cCCCC
Q psy7482 251 -----AITAYN-LTDGS--HLWHIKASASRIKG-LASHR--NHLICITSA---GDLVVWELNEDVTREPQRVSA-TNDGC 315 (327)
Q Consensus 251 -----~i~i~d-~~~~~--~~~~~~~~~~~v~~-~~~~~--~~l~~~~~d---g~v~iw~~~~~~~~~~~~~~~-~~~~~ 315 (327)
.|.+|| ...++ +...+..+...+.. ++|+| +.|+..+.+ +.+++|+++.........+.. ..+..
T Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~ 410 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENC 410 (723)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSC
T ss_pred CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCC
Confidence 577777 34443 14555544444554 68999 677655544 789999997653112222221 11455
Q ss_pred ceEEEEeCCC
Q psy7482 316 RFTCLAIRPP 325 (327)
Q Consensus 316 ~i~~l~~~p~ 325 (327)
.+..++|+|+
T Consensus 411 ~~~~~~~spd 420 (723)
T 1xfd_A 411 TYFSASFSHS 420 (723)
T ss_dssp CCCEEEECTT
T ss_pred CeEEEEECCC
Confidence 6888999987
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.96 E-value=5.1e-26 Score=212.47 Aligned_cols=305 Identities=11% Similarity=0.083 Sum_probs=224.5
Q ss_pred eeccCCccEEEEEe--CCCEEEEecCC------CeEEEEEccccccccccccccccE-------EEEEECCCCCeEEEec
Q psy7482 9 VTHSHTASVRSVAA--TSKLAASSGAD------ETVVLYDMVKRKQSGALMQHEGTI-------TCLKFTPEGSHLISCS 73 (327)
Q Consensus 9 ~~~~h~~~v~~~~~--~~~~l~~~~~d------g~v~~w~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~~~ 73 (327)
.+.+|...+.+++| ||++||.++.+ ..|++||+.+++ ...+..|...+ ..++|+|||+.+++++
T Consensus 47 ~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~ 125 (1045)
T 1k32_A 47 KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTD 125 (1045)
T ss_dssp EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred EeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEEEC
Confidence 34479999999999 99999987543 479999998776 56677888888 9999999999777777
Q ss_pred CC------CcEEEEEcCCCeEEEe-------------------------------------------------EEecccC
Q psy7482 74 DD------GSIAIFRVGSWQLEKL-------------------------------------------------FKKAHKG 98 (327)
Q Consensus 74 ~d------~~i~iw~~~~~~~~~~-------------------------------------------------~~~~~~~ 98 (327)
.+ ..|..|++.+++.... + ..|..
T Consensus 126 ~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l-~~~~~ 204 (1045)
T 1k32_A 126 AMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKI-VDMST 204 (1045)
T ss_dssp TTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEE-ECCSS
T ss_pred CcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEEC-cCCCC
Confidence 54 3588888766543211 1 22334
Q ss_pred CceeeEEEecCCCEEEEEeCCCCEEEEEcCC-Cceeeeeeccc---------c-------------------------Cc
Q psy7482 99 TAVNHISIHPSGKLALSVGKDKTLRTWNLVK-GRSAYITNLSS---------Y-------------------------GV 143 (327)
Q Consensus 99 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~---------~-------------------------~~ 143 (327)
. +.++.|+++ .++++++.++.+.+|.+.. +.....+.... . ..
T Consensus 205 ~-v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~ 282 (1045)
T 1k32_A 205 H-VSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEI 282 (1045)
T ss_dssp C-CEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECCC
T ss_pred c-ccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeecc
Confidence 4 677778776 5666677778888887542 11111100000 0 00
Q ss_pred -----------cccceEEEEEc-cCCcEEEeecCCeEEEEEecCCceeeEecCCC-ceeEEEeecC-ceEEEeCCCCcEE
Q psy7482 144 -----------GFENLDSVVWS-PEGLLYAIPIQNKAVVFSVEKAGVLQTLKSES-KVHSVCFLNE-TTVCTGNEESAIT 209 (327)
Q Consensus 144 -----------~~~~v~~~~~~-~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~-~i~~~~~~~~-~~l~~~~~d~~i~ 209 (327)
+...+.+++|+ |+|+.++.+.++.+.+|+...++......+.. .+..++|+ + ..++.++.++.+.
T Consensus 283 ~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~ 361 (1045)
T 1k32_A 283 GDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFL 361 (1045)
T ss_dssp CCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEE
T ss_pred CcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceE
Confidence 11247788999 99988888888889999888776554333556 78899999 8 6677777788888
Q ss_pred -EEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEE
Q psy7482 210 -AYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICI 286 (327)
Q Consensus 210 -i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~ 286 (327)
+||+..++.. .+..|...+..++| +|+|++|++++.++.|++||+.+++....+.+|...+.+++|+| ++|+++
T Consensus 362 ~~~d~~~~~~~-~l~~~~~~~~~~~~--SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 362 GIYDYRTGKAE-KFEENLGNVFAMGV--DRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp EEEETTTCCEE-ECCCCCCSEEEEEE--CTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred EEEECCCCCce-EecCCccceeeeEE--CCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEE
Confidence 8898876544 34477788999999 59999999999999999999999998888878999999999999 788888
Q ss_pred ecCC----------cEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 287 TSAG----------DLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 287 ~~dg----------~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
+.++ .|++||+..+ . ......+...+.+++|+|+.
T Consensus 439 ~~~~~~~~~~~~~~~i~l~d~~~g---~--~~~l~~~~~~~~~~~~spdG 483 (1045)
T 1k32_A 439 FPLKHGETDGYVMQAIHVYDMEGR---K--IFAATTENSHDYAPAFDADS 483 (1045)
T ss_dssp EEECSSTTCSCCEEEEEEEETTTT---E--EEECSCSSSBEEEEEECTTS
T ss_pred ecCccccccCCCCCeEEEEECCCC---c--EEEeeCCCcccCCceEcCCC
Confidence 7654 8999999887 2 22334456678889999873
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=2.2e-26 Score=206.99 Aligned_cols=291 Identities=11% Similarity=0.152 Sum_probs=202.2
Q ss_pred EEeCCCEEEEecCCCeEEEEEccccccc-ccccccc-----------------ccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482 20 VAATSKLAASSGADETVVLYDMVKRKQS-GALMQHE-----------------GTITCLKFTPEGSHLISCSDDGSIAIF 81 (327)
Q Consensus 20 ~~~~~~~l~~~~~dg~v~~w~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~~~~~d~~i~iw 81 (327)
+.|.++.+++++.|+ | +||+.+++.+ ..+..|. ..|.+++|+|| +.++.+. ++.|++|
T Consensus 31 ~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i~~~ 106 (706)
T 2z3z_A 31 LQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGLVGF 106 (706)
T ss_dssp CEEETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEEEEE
T ss_pred CcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEEEEE
Confidence 444366667777777 8 9999999873 4444333 46999999999 6655553 5899999
Q ss_pred EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC-----CceeeeeeccccC---------ccccc
Q psy7482 82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK-----GRSAYITNLSSYG---------VGFEN 147 (327)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~---------~~~~~ 147 (327)
|+.+++..... .+... +.+++|+|||+.|+++ .++.|++||+.+ ++........... .+...
T Consensus 107 d~~~~~~~~l~--~~~~~-~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~ 182 (706)
T 2z3z_A 107 DMLARKVTYLF--DTNEE-TASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGI 182 (706)
T ss_dssp ETTTTEEEEEE--CCTTC-CTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTC
T ss_pred ECCCCceEEcc--CCccc-ccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCC
Confidence 99988765543 34445 8899999999999985 679999999988 7654433222110 00112
Q ss_pred eEEEEEccCCcEEEeec----------------------------------CCeEEEEEecCCceeeEe---cCCCceeE
Q psy7482 148 LDSVVWSPEGLLYAIPI----------------------------------QNKAVVFSVEKAGVLQTL---KSESKVHS 190 (327)
Q Consensus 148 v~~~~~~~~~~~l~~~~----------------------------------~~~i~i~d~~~~~~~~~~---~~~~~i~~ 190 (327)
+.++.|+|||+.|+++. +..|++||+.+++..... .+...+..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 47899999999888874 257999999988765444 24567899
Q ss_pred EEeecC-ceEEEeCCCC-----cEEEEEcCCCceeEEee-e-ccc---ceEEEEEEecC--CCcEEEEecCCCeEEEEEc
Q psy7482 191 VCFLNE-TTVCTGNEES-----AITAYNLTDGSHLWQIK-A-SAS---RIKGLVFFSIP--QETTVCTGNEESAITAYNL 257 (327)
Q Consensus 191 ~~~~~~-~~l~~~~~d~-----~i~i~d~~~~~~~~~~~-~-~~~---~v~~~~~~~s~--~~~~l~~~~~d~~i~i~d~ 257 (327)
++|+|| +.+++++.++ .|++||+.+++....+. . +.. .+..++| +| +|+++++++.|+.+++|++
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~--sp~~dg~~l~~~~~~g~~~l~~~ 340 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTF--LPGSNNQFIWQSRRDGWNHLYLY 340 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEE--CTTCSSEEEEEECTTSSCEEEEE
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCcee--ecCCCCEEEEEEccCCccEEEEE
Confidence 999999 6677766665 89999999884443332 2 222 2356788 48 9999999999999999988
Q ss_pred C-CCceeEEeecccCceEE-EeeeC--cEEE-EEecCC----cEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 258 T-DGSHLWHIKASASRIKG-LASHR--NHLI-CITSAG----DLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 258 ~-~~~~~~~~~~~~~~v~~-~~~~~--~~l~-~~~~dg----~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
. ++..+..+..+...+.. ++|+| +.|+ +++.++ .|..|++..+ ....+ .+...+.+++|+|+.
T Consensus 341 ~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~---~~~~l---~~~~~~~~~~~spdg 412 (706)
T 2z3z_A 341 DTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG---KTKDL---TPESGMHRTQLSPDG 412 (706)
T ss_dssp ETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC---CCEES---CCSSSEEEEEECTTS
T ss_pred ECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC---Cceec---cCCCceEEEEECCCC
Confidence 6 67777888888777877 79999 5554 444554 4555555554 23333 345568899999973
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=5.6e-25 Score=181.47 Aligned_cols=267 Identities=8% Similarity=0.046 Sum_probs=205.1
Q ss_pred CCccEEEEEe--CCCEEEEecC-------CCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEE
Q psy7482 13 HTASVRSVAA--TSKLAASSGA-------DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFR 82 (327)
Q Consensus 13 h~~~v~~~~~--~~~~l~~~~~-------dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~ 82 (327)
....+..+++ +++++++++. ++.|.+||..+++....+.. ...+..++|+|++++++ +...++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3456778888 7788877763 56899999999988877764 34478899999999555 556679999999
Q ss_pred cCCCeEEEeEEecccCC-------ceeeEEEecCCCEEEEEe--CCCCEEEEEcCCCceeeeeeccccCccccceEEEEE
Q psy7482 83 VGSWQLEKLFKKAHKGT-------AVNHISIHPSGKLALSVG--KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW 153 (327)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 153 (327)
..+++....+....... .+.++.|+|+++.+++++ .++.|.+||+.+++....+..... .+..++|
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~ 192 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK-----MSTGLAL 192 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT-----TCCCCEE
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC-----ccceEEE
Confidence 99999888773322111 168899999999887776 478899999999887766552221 2778999
Q ss_pred ccCCcEEEeec-CCeEEEEEecCCceeeEecC-----CCceeEEEeecC-ceEEE-eCCCCcEEEEEcCCCceeEEeeec
Q psy7482 154 SPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKS-----ESKVHSVCFLNE-TTVCT-GNEESAITAYNLTDGSHLWQIKAS 225 (327)
Q Consensus 154 ~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~-----~~~i~~~~~~~~-~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~ 225 (327)
+|+++.++++. ++.+.+||..+++....+.. ...+..++|+|+ +.+++ ...++.|.+||..+++.+..+...
T Consensus 193 s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 193 DSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp ETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 99999887776 89999999999998877762 445788999998 55554 445699999999999988877654
Q ss_pred ccceEEEEEEecCCCcEEEE-ecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCC
Q psy7482 226 ASRIKGLVFFSIPQETTVCT-GNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAG 290 (327)
Q Consensus 226 ~~~v~~~~~~~s~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg 290 (327)
.. ..++|+ |+++++++ ...++.|.+||..+++.+..+.... .+.+++|+| ++|+.+..++
T Consensus 273 ~~--~~~~~s--~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 273 ES--LAVLFN--PARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp SC--CCEEEE--TTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEECC
T ss_pred CC--ceEEEC--CCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEccc
Confidence 42 568885 89986554 4578999999999999888877554 678999998 6566666554
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=4e-25 Score=182.32 Aligned_cols=262 Identities=9% Similarity=0.035 Sum_probs=203.3
Q ss_pred ccccEEEEEECCCCCeEEEecC-------CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEE-eCCCCEEE
Q psy7482 53 HEGTITCLKFTPEGSHLISCSD-------DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSV-GKDKTLRT 124 (327)
Q Consensus 53 ~~~~v~~~~~~~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i 124 (327)
....+..++|+|+++++++++. ++.|.+||..+++....+.. ... +..++|+|++++++.+ ..++.|.+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~-~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--DLK-PFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--SSC-CCSEEEETTTTEEEEEETTTTEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--CCC-cceEEECCCCCEEEEEecCCCEEEE
Confidence 3456789999999998887774 56899999999998888732 233 7889999999966555 55799999
Q ss_pred EEcCCCceeeeeeccccCc----cccceEEEEEccCCcEEEeec---CCeEEEEEecCCceeeEec-CCCceeEEEeecC
Q psy7482 125 WNLVKGRSAYITNLSSYGV----GFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE 196 (327)
Q Consensus 125 wd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~ 196 (327)
||..+++....+....... ....+..++|+|+++.++++. ++.|.+||..+++....+. ....+..++|+|+
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETT
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCC
Confidence 9999998877666543210 011268899999998766654 6889999999999998888 6666899999999
Q ss_pred -ceEEEeCCCCcEEEEEcCCCceeEEeee----cccceEEEEEEecCCCcEEEEecC-CCeEEEEEcCCCceeEEeeccc
Q psy7482 197 -TTVCTGNEESAITAYNLTDGSHLWQIKA----SASRIKGLVFFSIPQETTVCTGNE-ESAITAYNLTDGSHLWHIKASA 270 (327)
Q Consensus 197 -~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~ 270 (327)
+.+++++.++.+.+||..+++.+..+.. +...+..++|. |+++++++++. ++.|.+||+.+++.+..+....
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s--~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 273 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLD--TARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE 273 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE--TTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC--CCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 7788888999999999999988877764 45567788995 89987766554 5999999999999888877544
Q ss_pred CceEEEeeeC--cE-EEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482 271 SRIKGLASHR--NH-LICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 271 ~~v~~~~~~~--~~-l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~ 326 (327)
...++|+| ++ +++...++.|.+||..+. ..+.....+..+.+++|+|+.
T Consensus 274 --~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-----~~~~~~~~~~~~~~~~~s~dg 325 (353)
T 3vgz_A 274 --SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY-----KVVKTFDTPTHPNSLALSADG 325 (353)
T ss_dssp --CCCEEEETTTTEEEEEETTTTEEEEEETTTT-----EEEEEEECCSEEEEEEECTTS
T ss_pred --CceEEECCCCCEEEEEECCCCeEEEEECCCC-----eEEEEEecCCCCCeEEEcCCC
Confidence 26789998 54 445557899999999887 233333445578999999873
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=2.2e-25 Score=200.45 Aligned_cols=274 Identities=16% Similarity=0.220 Sum_probs=200.8
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC-----Ce
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS-----WQ 87 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-----~~ 87 (327)
..|.+++| + +.++.+. ++.|++||+.+++... +..+...+.+++|+|||+.|+++ .++.|++||+.+ ++
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 56999999 6 6655553 6999999998876543 44466778899999999999985 678999999998 77
Q ss_pred EEEeEEecccCC-------------ceeeEEEecCCCEEEEEe---------------------------------CCCC
Q psy7482 88 LEKLFKKAHKGT-------------AVNHISIHPSGKLALSVG---------------------------------KDKT 121 (327)
Q Consensus 88 ~~~~~~~~~~~~-------------~v~~~~~~~~~~~l~~~~---------------------------------~dg~ 121 (327)
..... ..+... .+.++.|+|||++|++++ .+..
T Consensus 158 ~~~~~-~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 158 AIAVT-IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CEESC-SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred cEEec-cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 66544 333332 048899999999999987 3467
Q ss_pred EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC-----eEEEEEecCCceeeEe-c--CCC---cee
Q psy7482 122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN-----KAVVFSVEKAGVLQTL-K--SES---KVH 189 (327)
Q Consensus 122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~-----~i~i~d~~~~~~~~~~-~--~~~---~i~ 189 (327)
|.+||+.+++........ .+...+.+++|+|||+.++++. ++ .|++||+.+++....+ . ... .+.
T Consensus 237 l~~~d~~~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGE---PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEETTTTEEEECCCCS---CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred EEEEECCCCceEeeccCC---CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 999999888754333211 1234489999999999888765 54 8999999988433333 2 222 346
Q ss_pred EEEeec--C-ceEEEeCCCCcEEEEEcC-CCceeEEeeecccceEE-EEEEecCCCcEEEEe-cCCC----eEEEEEcCC
Q psy7482 190 SVCFLN--E-TTVCTGNEESAITAYNLT-DGSHLWQIKASASRIKG-LVFFSIPQETTVCTG-NEES----AITAYNLTD 259 (327)
Q Consensus 190 ~~~~~~--~-~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~-~~~~~s~~~~~l~~~-~~d~----~i~i~d~~~ 259 (327)
.++|+| + .+++++..++.+++|++. +++.+..+..+...+.. ++| +|+++.|+.+ +.++ .|..||+.+
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~--spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGF--DPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp CCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEE--CTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred CceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEE--cCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 789999 8 677788889999999876 66777778777777876 678 4899877654 4444 677778777
Q ss_pred CceeEEeecccCceEEEeeeC--cEEEEEecC----CcEEEEEccCc
Q psy7482 260 GSHLWHIKASASRIKGLASHR--NHLICITSA----GDLVVWELNED 300 (327)
Q Consensus 260 ~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d----g~v~iw~~~~~ 300 (327)
++ ...+. +...+.+++|+| ++++....+ +.|++||+..+
T Consensus 392 ~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 392 GK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp CC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred CC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 65 33443 566789999999 666665443 45999998776
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.95 E-value=5.1e-25 Score=181.36 Aligned_cols=268 Identities=10% Similarity=0.050 Sum_probs=187.7
Q ss_pred CCCEEEEecCCCeEEEEEcccccccccccccc-ccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEeccc---
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHK--- 97 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~--- 97 (327)
++.++++++.++.|++||+.+++.+..+..+. ..+..++|+|++++++ ++..++.|.+||+.+++....+...+.
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE 89 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc
Confidence 67788999999999999999998887776443 2578899999998654 556789999999999988877733331
Q ss_pred -CCceeeEEEecCCCEEEEEeCC------------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482 98 -GTAVNHISIHPSGKLALSVGKD------------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI 164 (327)
Q Consensus 98 -~~~v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 164 (327)
...+..++|+|+++++++++.+ +.|.+||+.+++.......... ...+.+++|+|++++ +++
T Consensus 90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~s~dg~l-~~~- 164 (349)
T 1jmx_B 90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM---PRQVYLMRAADDGSL-YVA- 164 (349)
T ss_dssp EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC---CSSCCCEEECTTSCE-EEE-
T ss_pred ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC---CCcccceeECCCCcE-EEc-
Confidence 1227889999999999998865 8999999988554332211111 113888999999994 444
Q ss_pred CCeEEEEEecCCceeeEecCCC-------------------------ceeEEEeecCc-eEEEeC-CCCcEEEEEcCCCc
Q psy7482 165 QNKAVVFSVEKAGVLQTLKSES-------------------------KVHSVCFLNET-TVCTGN-EESAITAYNLTDGS 217 (327)
Q Consensus 165 ~~~i~i~d~~~~~~~~~~~~~~-------------------------~i~~~~~~~~~-~l~~~~-~d~~i~i~d~~~~~ 217 (327)
++.|.+||..+++....+.... ....+++++++ ...... ....+..+|..+++
T Consensus 165 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 165 GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 244 (349)
T ss_dssp SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc
Confidence 3449999999998887776322 23445555431 000000 00111224444433
Q ss_pred e-eEEeeecccceEEEEEEecC-CCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEE
Q psy7482 218 H-LWQIKASASRIKGLVFFSIP-QETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLV 293 (327)
Q Consensus 218 ~-~~~~~~~~~~v~~~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~ 293 (327)
. ...+..+...+..+++ +| ++++++++ ++.|.+||+.+++.+..+... ..+.+++|+| ++|++++.++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~--sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~ 319 (349)
T 1jmx_B 245 THTQEFADLTELYFTGLR--SPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLA 319 (349)
T ss_dssp EEEEEEEECSSCEEEEEE--CSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEE
T ss_pred EEecccccCCCcceeeEe--cCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEE
Confidence 2 1122334556788888 48 99999988 889999999999988777644 3578899998 6777788899999
Q ss_pred EEEccCc
Q psy7482 294 VWELNED 300 (327)
Q Consensus 294 iw~~~~~ 300 (327)
+||+.+.
T Consensus 320 v~d~~~~ 326 (349)
T 1jmx_B 320 VFNPDTL 326 (349)
T ss_dssp EEETTTT
T ss_pred EEecccc
Confidence 9999887
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=1.8e-24 Score=177.66 Aligned_cols=259 Identities=10% Similarity=0.122 Sum_probs=178.9
Q ss_pred cCCccEEEEEe--CCCEEEEecCC-CeEEEEEcc--ccc--cccccccccccEEEEEECCCCCeEEEecC-CCcEEEEEc
Q psy7482 12 SHTASVRSVAA--TSKLAASSGAD-ETVVLYDMV--KRK--QSGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRV 83 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~~~~~d-g~v~~w~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~ 83 (327)
.|...+.+++| ++++|++++.+ +.|++|++. +++ .+..+..+. .+..++|+|++++|++++. ++.|.+||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 47778888998 88888888776 999999997 444 333444333 7889999999998876654 888999999
Q ss_pred CCC---eEEEeEEecccCCceeeEEEecCCCEEEEEe-CCCCEEEEEcCC-Cceeeee--eccccCccccceEEEEEccC
Q psy7482 84 GSW---QLEKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVK-GRSAYIT--NLSSYGVGFENLDSVVWSPE 156 (327)
Q Consensus 84 ~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~~~--~~~~~~~~~~~v~~~~~~~~ 156 (327)
..+ +....+ . .... +.+++|+|+++++++++ .++.|.+||+.+ ++..... ...... ...+..++|+|+
T Consensus 114 ~~~~~~~~~~~~-~-~~~~-~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~pd 188 (343)
T 1ri6_A 114 EDGLPVGVVDVV-E-GLDG-CHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE--GAGPRHMVFHPN 188 (343)
T ss_dssp ETTEEEEEEEEE-C-CCTT-BCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST--TCCEEEEEECTT
T ss_pred CCCccccccccc-c-CCCC-ceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC--CCCcceEEECCC
Confidence 433 333333 2 2233 89999999999888887 889999999987 5443222 111111 123788999999
Q ss_pred CcEEEeec--CCeEEEEEecC--Cce--eeEec---C----CCceeEEEeecC-ceEE-EeCCCCcEEEEEcCC----Cc
Q psy7482 157 GLLYAIPI--QNKAVVFSVEK--AGV--LQTLK---S----ESKVHSVCFLNE-TTVC-TGNEESAITAYNLTD----GS 217 (327)
Q Consensus 157 ~~~l~~~~--~~~i~i~d~~~--~~~--~~~~~---~----~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~----~~ 217 (327)
+++++++. ++.+.+||+.. ++. ...+. . ...+..++|+|+ ++++ ++..++.|.+||+.. .+
T Consensus 189 g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~ 268 (343)
T 1ri6_A 189 EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS 268 (343)
T ss_dssp SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceE
Confidence 99665443 89999999953 332 22222 1 235668999998 4555 566899999999982 33
Q ss_pred eeEEeeecccceEEEEEEecCCCcEEEEec-CCCeEEEEEcC--CCc--eeEEeecccCceEEEeeeC
Q psy7482 218 HLWQIKASASRIKGLVFFSIPQETTVCTGN-EESAITAYNLT--DGS--HLWHIKASASRIKGLASHR 280 (327)
Q Consensus 218 ~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~~~ 280 (327)
.+..+..+.. +..++| +|++++|++++ .++.|.+|++. +++ .+..+... ....+++|.+
T Consensus 269 ~~~~~~~~~~-~~~~~~--s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~ 332 (343)
T 1ri6_A 269 KEGFQPTETQ-PRGFNV--DHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNA 332 (343)
T ss_dssp EEEEEECSSS-CCCEEE--CTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEE
T ss_pred EeeeecCCCc-cceEEE--CCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEc
Confidence 4445554444 888999 48999888777 68999999554 554 33444432 3445666655
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=7.9e-24 Score=174.30 Aligned_cols=263 Identities=11% Similarity=0.186 Sum_probs=179.3
Q ss_pred CCCeEEEEEcc--cccccc-ccccccccEEEEEECCCCCeEEEecC---CCcEEEEEcCCCeEE--EeEEecccCCceee
Q psy7482 32 ADETVVLYDMV--KRKQSG-ALMQHEGTITCLKFTPEGSHLISCSD---DGSIAIFRVGSWQLE--KLFKKAHKGTAVNH 103 (327)
Q Consensus 32 ~dg~v~~w~~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~~--~~~~~~~~~~~v~~ 103 (327)
.++.|.+|++. +++... ....+...+..++|+|+|+ |++++. ++.|.+|++.+++.. ..+ ..+... +..
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~-~~~~~~-p~~ 90 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV-VAPGTP-PAY 90 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE-EEESCC-CSE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee-ecCCCC-CEE
Confidence 45668887765 344332 2234556678899999999 555544 689999999877643 332 334445 899
Q ss_pred EEEecCCCEEEEEe-CCCCEEEEEcC-CCceeeeeeccccC------ccccceEEEEEccCCcEEEeec-CCeEEEEEec
Q psy7482 104 ISIHPSGKLALSVG-KDKTLRTWNLV-KGRSAYITNLSSYG------VGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVE 174 (327)
Q Consensus 104 ~~~~~~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~ 174 (327)
++|+|++++|++++ .++.+.+|++. ++............ .....+.+++|+|+++++++.. ++.|.+|++.
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 99999999888888 67899999995 33322222221110 0122378899999999655555 7899999998
Q ss_pred -CCceee--Eec--CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCC--Cce--eEEeeecc------cceEEEEEEec
Q psy7482 175 -KAGVLQ--TLK--SESKVHSVCFLNE-TTV-CTGNEESAITAYNLTD--GSH--LWQIKASA------SRIKGLVFFSI 237 (327)
Q Consensus 175 -~~~~~~--~~~--~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~--~~~--~~~~~~~~------~~v~~~~~~~s 237 (327)
+++... .+. ....+..++|+|+ +++ +++..++.+.+|++.. ++. +..+.... ..+..++| +
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~--s 248 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRL--S 248 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEE--C
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEE--C
Confidence 454332 222 3346788999999 544 4467789999999874 432 22222222 34778999 5
Q ss_pred CCCcEEE-EecCCCeEEEEEcCC---CceeEEeecccCceEEEeeeC--cEEEEEecC-CcEEEEEccC
Q psy7482 238 PQETTVC-TGNEESAITAYNLTD---GSHLWHIKASASRIKGLASHR--NHLICITSA-GDLVVWELNE 299 (327)
Q Consensus 238 ~~~~~l~-~~~~d~~i~i~d~~~---~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d-g~v~iw~~~~ 299 (327)
|+|++|+ +...++.|.+|++.. .+.+..+..+...+..++|+| ++|++++.+ +.|.+|+++.
T Consensus 249 pdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 249 HDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp TTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 9999874 555689999999973 245566666666789999999 677777654 8899996653
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.95 E-value=2.4e-25 Score=207.90 Aligned_cols=274 Identities=10% Similarity=0.042 Sum_probs=217.2
Q ss_pred ccCCccEEEEEe-CCCEEEEecCCCeEEEEEccc-cccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482 11 HSHTASVRSVAA-TSKLAASSGADETVVLYDMVK-RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (327)
Q Consensus 11 ~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~ 88 (327)
.+|...+.++.| ...++++++.|+.++||.+.. +.....+..|. .+...+|+|+|+.|+.+ .++.|.+|++...+.
T Consensus 200 ~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l 277 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKI 277 (1045)
T ss_dssp ECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCE
T ss_pred cCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEe
Confidence 589999999999 335666788889999998753 44445555554 36677999999999887 488999999954443
Q ss_pred EEeEEec-----------ccCCceeeEEEe-cCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcccc-ceEEEEEcc
Q psy7482 89 EKLFKKA-----------HKGTAVNHISIH-PSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFE-NLDSVVWSP 155 (327)
Q Consensus 89 ~~~~~~~-----------~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 155 (327)
. .+ .. +... +.+++|+ |+|+.|++++ ++.+.+|++..++.... ... .. .+..++|+
T Consensus 278 ~-~l-~~~~~~~~~~~~~~~~~-v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~---~~~---~~~~~~~~~~s- 346 (1045)
T 1k32_A 278 E-KI-EIGDLESPEDRIISIPS-KFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV---PEP---LRIRYVRRGGD- 346 (1045)
T ss_dssp E-EC-CCCCCCBCCSEEEECGG-GGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC---SCC---SCEEEEEECSS-
T ss_pred e-ee-ccCcccccccccccccc-cceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEc---cCC---CcceEEeeeEc-
Confidence 3 43 22 2224 8999999 9999999887 78999999987764332 111 22 48899999
Q ss_pred CCcEEEeec-CCeEE-EEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEE
Q psy7482 156 EGLLYAIPI-QNKAV-VFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL 232 (327)
Q Consensus 156 ~~~~l~~~~-~~~i~-i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~ 232 (327)
+++.++.++ ++.+. +||+.+++......+...+..++|+|| .++++++.++.|++||+.+++.......|...+..+
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~ 426 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDF 426 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCE
T ss_pred CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccce
Confidence 998888876 67788 889887765444446678999999999 788999999999999999998877777898899999
Q ss_pred EEEecCCCcEEEEecCCC----------eEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 233 VFFSIPQETTVCTGNEES----------AITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 233 ~~~~s~~~~~l~~~~~d~----------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
+| +|+|++|++++.++ .|++||+.+++ +..+..|...+..++|+| +.|+.++.++...+|+....
T Consensus 427 ~~--SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 427 TI--SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp EE--CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred EE--CCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 99 59999998877644 89999999887 677788888899999999 88999999888888986543
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=4.4e-25 Score=199.59 Aligned_cols=273 Identities=13% Similarity=0.108 Sum_probs=204.0
Q ss_pred cEEEEEe--CCCEEEEecCCCeEEEEEccccc--cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482 16 SVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (327)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 91 (327)
.|.+++| ||++|++++. +.|++||+.+++ ....+..|...+..++|+|||++|+.++ ++.|++||+.+++....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 4778888 9999998885 999999998873 4556777888899999999999999887 45899999998877655
Q ss_pred EEecccCC---------------ceeeEEEecCCCEEEEEeCCC---------------------------------CEE
Q psy7482 92 FKKAHKGT---------------AVNHISIHPSGKLALSVGKDK---------------------------------TLR 123 (327)
Q Consensus 92 ~~~~~~~~---------------~v~~~~~~~~~~~l~~~~~dg---------------------------------~i~ 123 (327)
. ..+... .+..+.|+|||++|++++.|+ .|.
T Consensus 188 ~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 188 T-ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp C-CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred c-cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 4 333221 147899999999999987765 788
Q ss_pred EEEcCC-CceeeeeeccccCccccceEEEEEccCCcEEEeec------CCeEEEEEecCCceeeEecC-C-C---ceeEE
Q psy7482 124 TWNLVK-GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI------QNKAVVFSVEKAGVLQTLKS-E-S---KVHSV 191 (327)
Q Consensus 124 iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~~~i~i~d~~~~~~~~~~~~-~-~---~i~~~ 191 (327)
+||+.+ ++....... ..+...+..++| |||+.|+++. +..|++||+.+++....+.. . . .+..+
T Consensus 267 ~~d~~~~~~~~~~~~~---~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLG---KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EECSSTTCCCEEECCC---SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEECCCCCceEEecCC---CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 999988 765433211 122345899999 9999888653 46799999999987776652 2 2 45689
Q ss_pred EeecC-ceEEEeCCCCcEEEEEcC-CCceeEEeeecccceEEEE-EEecCCCcEEE-EecCCC--eEEEEEcCC-CceeE
Q psy7482 192 CFLNE-TTVCTGNEESAITAYNLT-DGSHLWQIKASASRIKGLV-FFSIPQETTVC-TGNEES--AITAYNLTD-GSHLW 264 (327)
Q Consensus 192 ~~~~~-~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~-~~~s~~~~~l~-~~~~d~--~i~i~d~~~-~~~~~ 264 (327)
+|+|| .++++++.+|.+++|.+. +++ ...+..+...+..+. |+ |+++.|+ +++.++ .+++|++.. +....
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s--~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~ 419 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVD--EKAGLAYFRAGIESARESQIYAVPLQGGQPQ 419 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEE--TTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred EECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEe--CCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence 99999 677788889988888775 344 777777877888874 74 8998765 555555 899999864 55566
Q ss_pred EeecccCceEEEeeeC--cEEEEEecC----CcEEEEEccC
Q psy7482 265 HIKASASRIKGLASHR--NHLICITSA----GDLVVWELNE 299 (327)
Q Consensus 265 ~~~~~~~~v~~~~~~~--~~l~~~~~d----g~v~iw~~~~ 299 (327)
.+.. ...+..++|+| +.|+....+ +.+.+|+...
T Consensus 420 ~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 420 RLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp ECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred eccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence 6665 55788999999 555554433 4588888644
No 147
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.95 E-value=1.2e-23 Score=174.18 Aligned_cols=292 Identities=10% Similarity=0.136 Sum_probs=190.7
Q ss_pred EEEEe----cCCCeEEEEEcc--ccccccccccccccEEEEEECCCCCeEEEecCC----CcEEEEEcCC--CeEEEeEE
Q psy7482 26 LAASS----GADETVVLYDMV--KRKQSGALMQHEGTITCLKFTPEGSHLISCSDD----GSIAIFRVGS--WQLEKLFK 93 (327)
Q Consensus 26 ~l~~~----~~dg~v~~w~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~--~~~~~~~~ 93 (327)
+++.| +.++.|.+|++. +++.......+...+..++|+|++++|++++.+ +.|.+|++.. ++......
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~ 94 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNT 94 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeE
Confidence 44555 346789999764 444332222266678889999999999988875 7999998865 44332221
Q ss_pred -ecccCCceeeEEEecCCCEEEEEe-CCCCEEEEEcCCCceeeee----ecccc-----CccccceEEEEEccCCcEEEe
Q psy7482 94 -KAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYIT----NLSSY-----GVGFENLDSVVWSPEGLLYAI 162 (327)
Q Consensus 94 -~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~----~~~~~-----~~~~~~v~~~~~~~~~~~l~~ 162 (327)
..+... ...+++ ++++|++++ .++.+.+|++.....+... ..... ......+.+++|+|+++++++
T Consensus 95 ~~~~~~~-p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~ 171 (361)
T 3scy_A 95 QKTMGAD-PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLA 171 (361)
T ss_dssp EECSSSC-EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEE
T ss_pred eccCCCC-cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEE
Confidence 223334 677777 788777776 5789999999754332111 11110 001123678999999996655
Q ss_pred ec--CCeEEEEEecCCce--------------eeEecCCCceeEEEeecC-ceEEEeC-CCCcEEEEEcCCCce--eEEe
Q psy7482 163 PI--QNKAVVFSVEKAGV--------------LQTLKSESKVHSVCFLNE-TTVCTGN-EESAITAYNLTDGSH--LWQI 222 (327)
Q Consensus 163 ~~--~~~i~i~d~~~~~~--------------~~~~~~~~~i~~~~~~~~-~~l~~~~-~d~~i~i~d~~~~~~--~~~~ 222 (327)
+. ++.+.+|++..... .........+..++|+|+ +++++++ .++.|.+|++.+++. +..+
T Consensus 172 ~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~ 251 (361)
T 3scy_A 172 DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV 251 (361)
T ss_dssp EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE
T ss_pred EeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE
Confidence 54 78999999875431 112235567889999999 5565555 689999999987654 2222
Q ss_pred e---ecccceEEEEEEecCCCcEEEEecC--CCeEEEEEcC--CCc--eeEEeecccCceEEEeeeC--cEEEEEe-cCC
Q psy7482 223 K---ASASRIKGLVFFSIPQETTVCTGNE--ESAITAYNLT--DGS--HLWHIKASASRIKGLASHR--NHLICIT-SAG 290 (327)
Q Consensus 223 ~---~~~~~v~~~~~~~s~~~~~l~~~~~--d~~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~~~--~~l~~~~-~dg 290 (327)
. .+......++| +|+|++|+++.. ++.|.+|++. +++ .+..+.. ...+.+++|+| ++|++++ .++
T Consensus 252 ~~~~~~~~~~~~i~~--spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~ 328 (361)
T 3scy_A 252 AADTVNAQGSGDIHL--SPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTN 328 (361)
T ss_dssp ESCSSCCCCEEEEEE--CTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTT
T ss_pred ecCCCCCCCcccEEE--CCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCC
Confidence 2 22334678888 599999876665 4899999986 444 4444544 45788999999 6777776 678
Q ss_pred cEEEEEccCccCCCceeeeecCCCCceEEEEeCC
Q psy7482 291 DLVVWELNEDVTREPQRVSATNDGCRFTCLAIRP 324 (327)
Q Consensus 291 ~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p 324 (327)
.|.+|+++... .....+....+...++|++|.+
T Consensus 329 ~v~v~~~d~~~-g~~~~~~~~~~~~~p~~v~~~~ 361 (361)
T 3scy_A 329 VIQIFERDQAT-GLLTDIKKDIKVDKPVCLKFVD 361 (361)
T ss_dssp EEEEEEECTTT-CCEEECSCCEECSSEEEEEEEC
T ss_pred CEEEEEEECCC-CcEeecceeeeCCCCeEEEEcC
Confidence 89998776431 1233332222334689999863
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=4.4e-24 Score=174.57 Aligned_cols=242 Identities=10% Similarity=0.147 Sum_probs=175.7
Q ss_pred CCccEEEEEe--CCCEEEEec-CCCeEEEEEcccccc-ccccccccccEEEEEECCCCCeEEEecCCC---cEEEEEcCC
Q psy7482 13 HTASVRSVAA--TSKLAASSG-ADETVVLYDMVKRKQ-SGALMQHEGTITCLKFTPEGSHLISCSDDG---SIAIFRVGS 85 (327)
Q Consensus 13 h~~~v~~~~~--~~~~l~~~~-~dg~v~~w~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iw~~~~ 85 (327)
+...+ +++| +++++++++ .++.|.+||+.+++. ...+..+..+..+++|+|++++|+++..++ .|.+||+.+
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 44555 8888 788666555 489999999999887 667776666666699999999999665553 899999999
Q ss_pred CeEEEeEEecccCCceeeEEEecCCCEEEEE-eCCCC-EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSV-GKDKT-LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP 163 (327)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 163 (327)
++....+ .. ... ..+++|+|++++++++ ..++. |.+|++.............. .....+..++|+|+++.++++
T Consensus 118 ~~~~~~~-~~-~~~-~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 118 NKFISTI-PI-PYD-AVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp TEEEEEE-EC-CTT-EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEE
T ss_pred CCeEEEE-EC-CCC-ccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEE
Confidence 9988876 33 233 7899999999866555 45588 99999875433221110000 111237899999999865554
Q ss_pred -c-CCeEEEEEecCCce---eeEecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCCCce--eEEeeec----ccc--
Q psy7482 164 -I-QNKAVVFSVEKAGV---LQTLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTDGSH--LWQIKAS----ASR-- 228 (327)
Q Consensus 164 -~-~~~i~i~d~~~~~~---~~~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~~~~--~~~~~~~----~~~-- 228 (327)
. ++.|.+||+.+++. +..+.....+..++|+|+ ++++ +...++.|.+||+.+++. +..+..+ ..+
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 273 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLF 273 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGT
T ss_pred eCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcc
Confidence 3 88999999999988 777777788899999999 5454 445678899999998876 3333322 222
Q ss_pred -eEEEEEEecCCCcEEEEe-cCCCeEEEEEcCCCc
Q psy7482 229 -IKGLVFFSIPQETTVCTG-NEESAITAYNLTDGS 261 (327)
Q Consensus 229 -v~~~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~ 261 (327)
...++| +|++++|+++ ..++.|.+||+....
T Consensus 274 ~~~~~~~--spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 274 GANQMAL--NKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp TCCCEEE--CTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred cccceEE--CCCCCEEEEecCCCCcEEEEEecCCc
Confidence 245788 4999987654 556799999997654
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=1.5e-24 Score=174.20 Aligned_cols=242 Identities=12% Similarity=0.118 Sum_probs=180.7
Q ss_pred EecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC-CceeeeeeccccCccccceE
Q psy7482 71 SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK-GRSAYITNLSSYGVGFENLD 149 (327)
Q Consensus 71 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~ 149 (327)
.++.|+.|++||+.+++..... .|... +.+++|+|++++|++++ ++.|.+||+.+ ++........ ....+.
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~--~~~~~-v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~----~~~~~~ 88 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVW--QTPEL-FEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGF----ATICNN 88 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEE--EESSC-CEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTT----CCCBCS
T ss_pred CCCcceeEEEEeCCCCceeeec--cCCcc-eEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccc----cccccc
Confidence 4567899999999988876443 46666 99999999999999886 78999999988 7665433222 123488
Q ss_pred EEEEccCCcEEEeec---C--CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCC-CceeEE
Q psy7482 150 SVVWSPEGLLYAIPI---Q--NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTD-GSHLWQ 221 (327)
Q Consensus 150 ~~~~~~~~~~l~~~~---~--~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~-~~~~~~ 221 (327)
+++|+|+++.++++. + ..|..++..+++ ...+.....+..++|+|+ ..++ ++..++.+++|++.. ......
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 999999999888876 2 345555555544 445555556899999999 5555 777899999998632 334556
Q ss_pred eeecccceEEEEEEecCCCcEEEEec-CCCeEEEEEcC-CCceeEEeecccCceEEEeeeC--cEEEEEecC--------
Q psy7482 222 IKASASRIKGLVFFSIPQETTVCTGN-EESAITAYNLT-DGSHLWHIKASASRIKGLASHR--NHLICITSA-------- 289 (327)
Q Consensus 222 ~~~~~~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d-------- 289 (327)
+..+...+.+++|+ |++++|+.++ .++.+++|++. .+..+..+..|...+..++|+| ++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s--~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 168 LTHGEGRNDGPDYS--PDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp CCCSSSCEEEEEEC--TTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred cccCCCccccceEC--CCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 66777889999994 8999887655 58999999986 5667778888888899999999 778877766
Q ss_pred ---CcEEEEEccCccCCCceeee-ecCCCCceEEEEeCCCC
Q psy7482 290 ---GDLVVWELNEDVTREPQRVS-ATNDGCRFTCLAIRPPV 326 (327)
Q Consensus 290 ---g~v~iw~~~~~~~~~~~~~~-~~~~~~~i~~l~~~p~~ 326 (327)
+.|++||+..+ ....+. ...+...+.+++|+|+.
T Consensus 246 ~~~~~l~~~d~~~~---~~~~~~~~~~~~~~~~~~~~spdg 283 (297)
T 2ojh_A 246 DLDVRVQLMDMDGG---NVETLFDLFGGQGTMNSPNWSPDG 283 (297)
T ss_dssp SEEEEEEEEETTSC---SCEEEEEEEESTTTSCSCCBCTTS
T ss_pred cCceEEEEEecCCC---CceeeeccCCCCcccccceECCCC
Confidence 46999999887 333333 22456678899999873
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=1e-24 Score=191.85 Aligned_cols=265 Identities=12% Similarity=0.063 Sum_probs=195.6
Q ss_pred CCccEEEEEe--CCCEEEEecC-CCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC---CCcEEEEEcCC-
Q psy7482 13 HTASVRSVAA--TSKLAASSGA-DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD---DGSIAIFRVGS- 85 (327)
Q Consensus 13 h~~~v~~~~~--~~~~l~~~~~-dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~- 85 (327)
+..+|.+++| ||+.||+++. ||+++||++.+++..+....+...+..++|+|| +.+++++. +....+|.+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 3567999998 9999998886 999999999766655444333368999999999 77777664 45566665533
Q ss_pred --CeEEEeEEecccCCceeeEEEecCCCE-EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482 86 --WQLEKLFKKAHKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI 162 (327)
Q Consensus 86 --~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 162 (327)
+... .+ .. ... +...+|+|+++. +++.+.++.+.+||+.+++........ ..+++|+|||+.++.
T Consensus 99 ~~g~~~-~l-~~-~~~-~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~--------~~~~~~spDG~~la~ 166 (582)
T 3o4h_A 99 RPGEEQ-RL-EA-VKP-MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP--------GFGFVSDIRGDLIAG 166 (582)
T ss_dssp STTCCE-EC-TT-SCS-BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES--------SCEEEEEEETTEEEE
T ss_pred CCCccc-cc-cC-CCC-ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC--------CceEEECCCCCEEEE
Confidence 2222 33 22 222 556788888853 344445556679999988765443221 268899999999997
Q ss_pred ec-C----CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCC--cEEEEEcCCCceeEEeeecccceEEEE-
Q psy7482 163 PI-Q----NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEES--AITAYNLTDGSHLWQIKASASRIKGLV- 233 (327)
Q Consensus 163 ~~-~----~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~- 233 (327)
++ + +.|++||+.+++......+...+..++|+|| ..|+++..++ .|++||+.+++.. .+..|...+..++
T Consensus 167 ~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~ 245 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRP 245 (582)
T ss_dssp EEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCC
T ss_pred EEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhh
Confidence 65 4 6799999998887655457788999999999 6777777888 8999999988877 7777777676666
Q ss_pred -------EEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC-cEEEEEecCCc---EEEEEcc
Q psy7482 234 -------FFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR-NHLICITSAGD---LVVWELN 298 (327)
Q Consensus 234 -------~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~---v~iw~~~ 298 (327)
| +|+|.++++++.|+.+++|++ ++... .+.+.+.+++|+. +++++++.+.. +.+|+..
T Consensus 246 ~~~~~~~~--spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 246 TAITWLGY--LPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLWRGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp SEEEEEEE--CTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEETTEEEEEEEETTEEEEEEEETTC
T ss_pred ccccceeE--cCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEecCCEEEEEEcCCCCCCeEEEEcCC
Confidence 8 599999999999999999999 65544 3446788888888 77788887754 6666654
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=4.6e-24 Score=174.74 Aligned_cols=239 Identities=12% Similarity=0.158 Sum_probs=184.5
Q ss_pred cEEEEEe--CCCEE-EEecCCCeEEEEEcccccccccccc-c----cccEEEEEECCCCCeEEEec------------CC
Q psy7482 16 SVRSVAA--TSKLA-ASSGADETVVLYDMVKRKQSGALMQ-H----EGTITCLKFTPEGSHLISCS------------DD 75 (327)
Q Consensus 16 ~v~~~~~--~~~~l-~~~~~dg~v~~w~~~~~~~~~~~~~-~----~~~v~~~~~~~~~~~l~~~~------------~d 75 (327)
.+..++| +++++ +++..++.|.+||+.+++.+..+.. + ...+..++|+|++++|+++. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 4667788 77655 5666789999999999887766553 1 22577899999999998886 57
Q ss_pred CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482 76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP 155 (327)
Q Consensus 76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 155 (327)
+.|.+||+.+++....+ .. ... +.+++|+|++++++++ ++.|.+||+.+++....+...... ..+.|+|
T Consensus 115 ~~i~v~d~~~~~~~~~~-~~-~~~-~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~------~~~~~s~ 183 (337)
T 1pby_B 115 TRVALYDAETLSRRKAF-EA-PRQ-ITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE------AETYAQP 183 (337)
T ss_dssp CEEEEEETTTTEEEEEE-EC-CSS-CCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT------TTTBCCC
T ss_pred ceEEEEECCCCcEEEEE-eC-CCC-cceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccC------CCceeCC
Confidence 99999999998888777 32 233 8889999999988887 689999999998876555443311 1226889
Q ss_pred CCcEEEeec--CC-----------------------eEEEEEecCCceeeEec---CCCceeEEEeecC-ceEEEeCCCC
Q psy7482 156 EGLLYAIPI--QN-----------------------KAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTGNEES 206 (327)
Q Consensus 156 ~~~~l~~~~--~~-----------------------~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~~~d~ 206 (327)
+++.++... ++ .|.+||+.+++.. .+. +...+.+++|+|+ ++++++ ++
T Consensus 184 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~ 260 (337)
T 1pby_B 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YN 260 (337)
T ss_dssp BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ES
T ss_pred CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CC
Confidence 888665543 22 4689999988765 332 5567889999999 567666 79
Q ss_pred cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC
Q psy7482 207 AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS 271 (327)
Q Consensus 207 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 271 (327)
.|.+||+.+++.+..+..+ ..+.+++| +|++++|++++.++.|.+||+.+++.+..+..+..
T Consensus 261 ~v~~~d~~~~~~~~~~~~~-~~~~~~~~--s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 261 VLESFDLEKNASIKRVPLP-HSYYSVNV--STDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN 322 (337)
T ss_dssp EEEEEETTTTEEEEEEECS-SCCCEEEE--CTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred eEEEEECCCCcCcceecCC-CceeeEEE--CCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence 9999999999888777644 45788899 49999999999999999999999998888876543
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=6e-23 Score=169.01 Aligned_cols=247 Identities=12% Similarity=0.177 Sum_probs=169.2
Q ss_pred cCCccEEEEEe--CCCEEEEecC---CCeEEEEEccccc--cccccccccccEEEEEECCCCCeEEEec-CCCcEEEEEc
Q psy7482 12 SHTASVRSVAA--TSKLAASSGA---DETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRV 83 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~~~~~---dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~ 83 (327)
.+...+..++| +++ |++++. ++.|++|++.+++ .+..+..+...+..++|+|++++|++++ .++.|.+|++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 34566667888 777 554443 6899999997665 3444455677889999999999888877 6789999999
Q ss_pred C-CCe--EEEeEEecc-------cCCceeeEEEecCCCEEEEEeCCCCEEEEEcC-CCceeeeeeccccCccccceEEEE
Q psy7482 84 G-SWQ--LEKLFKKAH-------KGTAVNHISIHPSGKLALSVGKDKTLRTWNLV-KGRSAYITNLSSYGVGFENLDSVV 152 (327)
Q Consensus 84 ~-~~~--~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~ 152 (327)
. ++. .+..+.... ....+.+++|+|+++++++...++.|.+|++. +++........... ...+..++
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~--g~~p~~~~ 193 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA--GFGPRHLV 193 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCT--TCCEEEEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC--CCCCceEE
Confidence 5 333 223221110 01127889999999966666668899999998 45433222111111 12377899
Q ss_pred EccCCcEEEee-c-CCeEEEEEecC--Cce--eeEec-CC------CceeEEEeecC-ceE-EEeCCCCcEEEEEcCCC-
Q psy7482 153 WSPEGLLYAIP-I-QNKAVVFSVEK--AGV--LQTLK-SE------SKVHSVCFLNE-TTV-CTGNEESAITAYNLTDG- 216 (327)
Q Consensus 153 ~~~~~~~l~~~-~-~~~i~i~d~~~--~~~--~~~~~-~~------~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~- 216 (327)
|+|+|++++++ . ++.+.+|++.. ++. ...+. .. ..+..++|+|+ +++ ++...++.|.+|++...
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g 273 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG 273 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC
Confidence 99999966664 3 78999999874 442 22222 11 45889999999 455 55567899999999732
Q ss_pred --ceeEEeeecccceEEEEEEecCCCcEEEEecC-CCeEEEEEc--CCCcee
Q psy7482 217 --SHLWQIKASASRIKGLVFFSIPQETTVCTGNE-ESAITAYNL--TDGSHL 263 (327)
Q Consensus 217 --~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~-d~~i~i~d~--~~~~~~ 263 (327)
+.+..+..+...+..++| +|+|++|++++. ++.|.+|++ .+++..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~--spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 274 HLTLIQQISTEGDFPRDFDL--DPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp CEEEEEEEECSSSCCCEEEE--CTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred cEEEeEEEecCCCCcCeEEE--CCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 445555666667889999 599998887765 489999954 456543
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=5.7e-23 Score=173.50 Aligned_cols=193 Identities=17% Similarity=0.191 Sum_probs=143.2
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEccccccc----------c-----ccccccccEEEEEECCCCCeEE----Eec
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS----------G-----ALMQHEGTITCLKFTPEGSHLI----SCS 73 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~----------~-----~~~~~~~~v~~~~~~~~~~~l~----~~~ 73 (327)
..++.+++ ++.++++++.++ +++|+....... . ....+...|++++|+|++++|+ +|+
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 34666777 788999998887 899876432110 0 0112456799999999999999 889
Q ss_pred CCCcEEEEEcCCC--------eE---EEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeecccc
Q psy7482 74 DDGSIAIFRVGSW--------QL---EKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSY 141 (327)
Q Consensus 74 ~d~~i~iw~~~~~--------~~---~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 141 (327)
.|+.|++||+.++ +. ...+ .+|... |.+++|+|+ +.+|++++.||.|++||++++........
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~-V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~--- 190 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLL-KDAGGM-VIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP--- 190 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECC-CSGGGS-EEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC---
T ss_pred CCceEEEEEccccccCCcCCcceeeeeecc-CCCCCc-eEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC---
Confidence 9999999998754 22 2333 557777 999999997 78999999999999999998854332221
Q ss_pred CccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-C-------CCceeEEEeecCceEEE--eCCCC----
Q psy7482 142 GVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-S-------ESKVHSVCFLNETTVCT--GNEES---- 206 (327)
Q Consensus 142 ~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~-------~~~i~~~~~~~~~~l~~--~~~d~---- 206 (327)
+...+.+++|+|+|++|++++ ||.|++||.+ ++....+. + ...+.+++|+++..+++ ...+|
T Consensus 191 --~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 191 --STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET 267 (434)
T ss_dssp --GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred --CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence 244599999999999999987 9999999998 55555443 2 22789999999855442 22333
Q ss_pred --cEEEEEcCCC
Q psy7482 207 --AITAYNLTDG 216 (327)
Q Consensus 207 --~i~i~d~~~~ 216 (327)
.+++|+++..
T Consensus 268 ~~~v~i~~l~~~ 279 (434)
T 2oit_A 268 SPDVVMALLPKK 279 (434)
T ss_dssp CCEEEEEECCCT
T ss_pred CCceEEEEeccC
Confidence 3899999865
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=1.7e-24 Score=195.08 Aligned_cols=299 Identities=11% Similarity=0.106 Sum_probs=199.7
Q ss_pred EEEe--CCCEEEEecCCCeEEEEEccccccccccccccc---cEEEEEECCCCCeEEEecC---------CCcEEEEEcC
Q psy7482 19 SVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEG---TITCLKFTPEGSHLISCSD---------DGSIAIFRVG 84 (327)
Q Consensus 19 ~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~i~iw~~~ 84 (327)
+++| ++++++++ .|+.|++||+.+++....+..|.. .+.+++|+|||++|++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 5667 77665554 599999999999987766665544 3899999999999998876 7899999999
Q ss_pred CCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccC----ccc---------cceEEE
Q psy7482 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYG----VGF---------ENLDSV 151 (327)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~~---------~~v~~~ 151 (327)
+++..... . .... +..++|+|||+.|+.+. ++.|++||+.+++........... .+. ....++
T Consensus 99 ~g~~~~~~-~-l~~~-~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 99 NGEFVRGN-E-LPRP-IQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTEECCSS-C-CCSS-BCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCccccce-e-cCcc-cccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 98763211 1 1134 88999999999999885 789999999888764432111110 000 112589
Q ss_pred EEccCCcEEEeec-CC----------------------------------eEEEEEecCCcee--eEe-------cCCCc
Q psy7482 152 VWSPEGLLYAIPI-QN----------------------------------KAVVFSVEKAGVL--QTL-------KSESK 187 (327)
Q Consensus 152 ~~~~~~~~l~~~~-~~----------------------------------~i~i~d~~~~~~~--~~~-------~~~~~ 187 (327)
+|+|||+.|+.++ +. .|++||+.+++.. ..+ .+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 9999999998875 31 7889999887753 111 25667
Q ss_pred eeEEEeecCceE-EEeCC--C--CcEEEEE----cCCCceeEEe----eecccceE-----EEEEEecCCCcEEEE--ec
Q psy7482 188 VHSVCFLNETTV-CTGNE--E--SAITAYN----LTDGSHLWQI----KASASRIK-----GLVFFSIPQETTVCT--GN 247 (327)
Q Consensus 188 i~~~~~~~~~~l-~~~~~--d--~~i~i~d----~~~~~~~~~~----~~~~~~v~-----~~~~~~s~~~~~l~~--~~ 247 (327)
+..++|+||+.+ ++... + ..|.+|| ..+++....+ ..|...+. .+.| +|+|+.++. +.
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~ 332 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVF--SYDAISYYKIFSD 332 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEE--CTTSSCEEEEEEC
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEE--CCCCCeEEEEEEc
Confidence 899999999544 44222 2 3488899 7777665555 35666666 7888 499986544 44
Q ss_pred CCC--eEEEEEcCCCceeEEeecccCceEEEeeeC-cEEEEEec-----CCcEEEEEccCccCC-Cceeeee-c-CCCCc
Q psy7482 248 EES--AITAYNLTDGSHLWHIKASASRIKGLASHR-NHLICITS-----AGDLVVWELNEDVTR-EPQRVSA-T-NDGCR 316 (327)
Q Consensus 248 ~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~-----dg~v~iw~~~~~~~~-~~~~~~~-~-~~~~~ 316 (327)
.+| .|.+||+.+++ ...+..+...+..+.+.. +.|+..+. ++..++|.++..... .+..+.. . .+...
T Consensus 333 ~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~ 411 (719)
T 1z68_A 333 KDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQ 411 (719)
T ss_dssp TTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBC
T ss_pred cCCceEEEEEECCCCc-eEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCc
Confidence 555 57777877666 445555555566655446 55554444 488999998763111 1222211 1 13345
Q ss_pred eEEEEeCCC
Q psy7482 317 FTCLAIRPP 325 (327)
Q Consensus 317 i~~l~~~p~ 325 (327)
+..+.|+|+
T Consensus 412 ~~~~~~s~d 420 (719)
T 1z68_A 412 YYTASFSDY 420 (719)
T ss_dssp BEEEEECGG
T ss_pred eEEEEECCC
Confidence 667777775
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=2.6e-24 Score=194.03 Aligned_cols=258 Identities=12% Similarity=0.118 Sum_probs=184.6
Q ss_pred cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCC--ceeeEEEecCCCEEEEEeCC---------CCEEE
Q psy7482 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT--AVNHISIHPSGKLALSVGKD---------KTLRT 124 (327)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d---------g~i~i 124 (327)
.+.+++|+|||+++++ +.||+|++||+.+++....+ ..+... .|.+++|+|||++|++++.+ +.+.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~-~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLI-EGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEE-CTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEe-ccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 4678899999997766 78999999999998877666 544431 28999999999999999764 67889
Q ss_pred EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCc----------------
Q psy7482 125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESK---------------- 187 (327)
Q Consensus 125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~---------------- 187 (327)
||+.+++.... .....+...+..++|+|||+.++.++++.|++||+.+++...... +...
T Consensus 96 ~d~~~~~~~~l---~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 96 SKIPHGDPQSL---DPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp EESSSCCCEEC---CCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred EECCCCceEec---cCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEec
Confidence 99998875222 222222334788999999999999998999999999887766554 2322
Q ss_pred --eeEEEeecC-ceEEEeCCCC----------------------------------cEEEEEcCCCceeEEeeec-----
Q psy7482 188 --VHSVCFLNE-TTVCTGNEES----------------------------------AITAYNLTDGSHLWQIKAS----- 225 (327)
Q Consensus 188 --i~~~~~~~~-~~l~~~~~d~----------------------------------~i~i~d~~~~~~~~~~~~~----- 225 (327)
+.+++|+|| +.|++++.++ .|++||+.+++....+..+
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 378999999 6777765432 7999999988765566544
Q ss_pred -ccceEEEEEEecCCCcEEEEec----CCCeEEEEEcCCCceeEEeecc-cCce----EEEeeeC--cEEEE--EecCC-
Q psy7482 226 -ASRIKGLVFFSIPQETTVCTGN----EESAITAYNLTDGSHLWHIKAS-ASRI----KGLASHR--NHLIC--ITSAG- 290 (327)
Q Consensus 226 -~~~v~~~~~~~s~~~~~l~~~~----~d~~i~i~d~~~~~~~~~~~~~-~~~v----~~~~~~~--~~l~~--~~~dg- 290 (327)
...+..++| +|||+++++.+ .+..|++||+.+++....+..+ ...+ ..++|+| +.|+. +..++
T Consensus 253 ~~~~~~~~~~--SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 253 REYYITMVKW--ATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG 330 (723)
T ss_dssp SSEEEEEEEE--SSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS
T ss_pred ccceeEEEEE--eCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC
Confidence 567889999 59999887654 3367999999999876665443 3333 3789999 54553 45666
Q ss_pred -----cEEEEEc-cCccCCC---ceeeeecCCCCceEE-EEeCCC
Q psy7482 291 -----DLVVWEL-NEDVTRE---PQRVSATNDGCRFTC-LAIRPP 325 (327)
Q Consensus 291 -----~v~iw~~-~~~~~~~---~~~~~~~~~~~~i~~-l~~~p~ 325 (327)
.|.+||+ ..+ . ...+. .....+.. ++|+|+
T Consensus 331 ~~~~~~l~~~d~~~~~---~~~~~~~l~--~~~~~~~~~~~~spd 370 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNS---SNDNIQSIT--SGDWDVTKILAYDEK 370 (723)
T ss_dssp SSCEEEEEEECSSCCS---SSCCCCBSC--CSSSCEEEEEEEETT
T ss_pred CcceeEEEEEeccCCC---CccceeEee--cCCeEEEeeeEEcCC
Confidence 4566663 333 2 22232 12233444 688887
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=1.2e-23 Score=184.98 Aligned_cols=246 Identities=9% Similarity=0.065 Sum_probs=182.9
Q ss_pred ccccEEEEEECCCCCeEEEecC-CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC---CCCEEEEEcC
Q psy7482 53 HEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK---DKTLRTWNLV 128 (327)
Q Consensus 53 ~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~ 128 (327)
+..+|.+++|+|||+.||+++. ||++.||++..++... + ..+....+..+.|+|| +.+++++. +....+|.+.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-l-t~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-L-NREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-C-CSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-e-ecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 3567999999999999998887 9999999997766544 3 3444223999999999 77777765 4556676554
Q ss_pred C---CceeeeeeccccCccccceEEEEEccCCc--EEEeecCCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEe
Q psy7482 129 K---GRSAYITNLSSYGVGFENLDSVVWSPEGL--LYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTG 202 (327)
Q Consensus 129 ~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~ 202 (327)
. +... . +.... .....+|+|+++ .++++.++.+.+||+.+++......+.. .+++|+|| ..++++
T Consensus 97 ~~~~g~~~-~--l~~~~----~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~ 167 (582)
T 3o4h_A 97 TSRPGEEQ-R--LEAVK----PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGL 167 (582)
T ss_dssp TTSTTCCE-E--CTTSC----SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEE
T ss_pred ccCCCccc-c--ccCCC----CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEE
Confidence 3 2222 1 21111 144567888775 4455556666799999887766555444 88999999 677766
Q ss_pred CCC----CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCC--eEEEEEcCCCceeEEeecccCceEEE
Q psy7482 203 NEE----SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEES--AITAYNLTDGSHLWHIKASASRIKGL 276 (327)
Q Consensus 203 ~~d----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~ 276 (327)
+.+ +.|++||+.+++.. .+..|...+..++| +|||+.|+++..++ .|++||+.+++.. .+..|...+..+
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~--SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~ 243 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASI--SPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSY 243 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEE--CTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHH
T ss_pred EEcCCCCeEEEEEcCCCCCce-EeecCCCccccceE--CCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhh
Confidence 666 78999999887654 66778888999999 59999999888888 8999999998877 777888778778
Q ss_pred e--------eeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeC
Q psy7482 277 A--------SHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIR 323 (327)
Q Consensus 277 ~--------~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 323 (327)
+ |+| .++++++.||.+++|++ +. ... .....+.+++|+
T Consensus 244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~---~~~----~~~~~v~~~~~s 291 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVARREGRSAVFID--GE---RVE----APQGNHGRVVLW 291 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE---EEC----CCSSEEEEEEEE
T ss_pred hhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC---eec----cCCCceEEEEec
Confidence 8 999 78899999999999999 41 111 223457777776
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.92 E-value=7.6e-22 Score=163.48 Aligned_cols=270 Identities=10% Similarity=0.043 Sum_probs=180.4
Q ss_pred EEEEecCC--CeEEEEEc--ccccccc--ccc-cccccEEEEEECCCCCeEEEecCCCcEEEEEcC-CCeEEEeEEeccc
Q psy7482 26 LAASSGAD--ETVVLYDM--VKRKQSG--ALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG-SWQLEKLFKKAHK 97 (327)
Q Consensus 26 ~l~~~~~d--g~v~~w~~--~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~~ 97 (327)
+++.|+.. +.|.+|++ .+++... ... .....+..++|+|++++|++++.+ .|.+|++. +++..........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 34555542 56888765 3454321 111 233467889999999999998888 99999997 7776544311111
Q ss_pred CCceeeEEEecCCCE--EEEEe-------------CCCCEEEEEcC-CCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482 98 GTAVNHISIHPSGKL--ALSVG-------------KDKTLRTWNLV-KGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA 161 (327)
Q Consensus 98 ~~~v~~~~~~~~~~~--l~~~~-------------~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 161 (327)
+. +.+++|+|++++ ++++. .+|.+.+|++. +++.......... .+...+.+++|+|+|++++
T Consensus 83 g~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 83 GH-PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY-QENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp SS-GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC-CTTCCEEEEEECTTSSEEE
T ss_pred CC-CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe-CCCCcceEEEECCCCCEEE
Confidence 33 667899999984 44543 68999999997 4554333221100 0123388999999999887
Q ss_pred eec--CCeEEEEEec-CCcee--eEec---CCCceeEEEeecC-ceEEEeC-CCCcEEEEEcC--CCcee---EEee---
Q psy7482 162 IPI--QNKAVVFSVE-KAGVL--QTLK---SESKVHSVCFLNE-TTVCTGN-EESAITAYNLT--DGSHL---WQIK--- 223 (327)
Q Consensus 162 ~~~--~~~i~i~d~~-~~~~~--~~~~---~~~~i~~~~~~~~-~~l~~~~-~d~~i~i~d~~--~~~~~---~~~~--- 223 (327)
++. ++.|++||+. +++.. ..+. +...+..++|+|+ +++++++ .++.|.+|++. +++.. ..+.
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 240 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC
Confidence 764 6799999998 66643 2333 2567899999999 5666655 57899999875 45432 1221
Q ss_pred ----eccc------ceEEEE-EEecCCCcEEEEecCCC------eEEEEEcC-CCceeE---EeecccCceEEEeeeC--
Q psy7482 224 ----ASAS------RIKGLV-FFSIPQETTVCTGNEES------AITAYNLT-DGSHLW---HIKASASRIKGLASHR-- 280 (327)
Q Consensus 224 ----~~~~------~v~~~~-~~~s~~~~~l~~~~~d~------~i~i~d~~-~~~~~~---~~~~~~~~v~~~~~~~-- 280 (327)
+|.. .+..++ | +|+|++|++++.+. .|.+|++. +++... ....+...+..++|+|
T Consensus 241 ~~~~g~~~~~~~~~~~~~i~~~--spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~ 318 (365)
T 1jof_A 241 PGIPDRDPETGKGLYRADVCAL--TFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCP 318 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEE--CTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECT
T ss_pred CCcCCcccccccccccccEEEE--CCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCC
Confidence 1221 477888 7 59999988765432 89999996 565443 2333445567788876
Q ss_pred ---cEEEEEecC-CcEEEEEccCc
Q psy7482 281 ---NHLICITSA-GDLVVWELNED 300 (327)
Q Consensus 281 ---~~l~~~~~d-g~v~iw~~~~~ 300 (327)
++|++++.+ +.|.+|+++..
T Consensus 319 ~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 319 WSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TCTTEEEEECSSSCEEEEEEEETT
T ss_pred cCCCEEEEEEcCCCeEEEEEEchh
Confidence 678888764 89999999876
No 158
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.92 E-value=2.2e-21 Score=160.14 Aligned_cols=285 Identities=9% Similarity=0.077 Sum_probs=200.3
Q ss_pred CCCEEEEec------CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCCC
Q psy7482 23 TSKLAASSG------ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSW 86 (327)
Q Consensus 23 ~~~~l~~~~------~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~ 86 (327)
+++++++.. .|+.|.+||..+++.+..+..+..+ .++|+||+++++++. .++.|.+||..++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 555555442 4789999999999988888776665 899999999999886 3567999999999
Q ss_pred eEEEeEEec-----ccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeee-eeccccCccccceEEEEEccCC-
Q psy7482 87 QLEKLFKKA-----HKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYI-TNLSSYGVGFENLDSVVWSPEG- 157 (327)
Q Consensus 87 ~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~- 157 (327)
+....+... +... ...++++|+|++|+++.. ++.|.+||+.+++.+.. +.... ...+.+.|++
T Consensus 92 ~~~~~i~~~~~~~~~g~~-p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-------~~~v~~~p~~~ 163 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNY-DGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-------CWSVIPQPNRP 163 (361)
T ss_dssp CEEEEEEECTTBCCBCCC-GGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-------EEEEEECTTSS
T ss_pred cEEEEEEcCccccccCCC-cceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-------cceeEEcCCCC
Confidence 888887332 1223 778999999999998874 57899999999876554 33221 2335667765
Q ss_pred cEEEe-ecCCeEEEEEecC-CceeeE------ecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce--eEEeeec-
Q psy7482 158 LLYAI-PIQNKAVVFSVEK-AGVLQT------LKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH--LWQIKAS- 225 (327)
Q Consensus 158 ~~l~~-~~~~~i~i~d~~~-~~~~~~------~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~- 225 (327)
..+++ +.||.+.+++... ++.... +........+.++++ ..++..+.++.+.++|+..... ...+...
T Consensus 164 ~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 243 (361)
T 2oiz_A 164 RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLN 243 (361)
T ss_dssp SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCC
T ss_pred eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccC
Confidence 34443 4489999898865 444311 111111223334555 4556666789999999875532 1221110
Q ss_pred -----c----cceEEEEEEecCCCcEEEEecC-----------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEE
Q psy7482 226 -----A----SRIKGLVFFSIPQETTVCTGNE-----------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHL 283 (327)
Q Consensus 226 -----~----~~v~~~~~~~s~~~~~l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l 283 (327)
. .....++++ |+++.++++.. .+.|.+||+.+++.+.++..+. +.+++|+| ++|
T Consensus 244 ~~~~~~~~~p~g~~~~a~~--~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l 319 (361)
T 2oiz_A 244 DEDKAKNWVPGGYNLVGLH--RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLM 319 (361)
T ss_dssp HHHHHTTCEECCSSCEEEE--TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEE
T ss_pred ccccccccccCCeeEEEEe--cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEE
Confidence 0 111226774 88777766532 3589999999999999999887 89999999 788
Q ss_pred EEEecCCcEEEEEccCccCCCceeeee-cCCCCceEEEEeCCC
Q psy7482 284 ICITSAGDLVVWELNEDVTREPQRVSA-TNDGCRFTCLAIRPP 325 (327)
Q Consensus 284 ~~~~~dg~v~iw~~~~~~~~~~~~~~~-~~~~~~i~~l~~~p~ 325 (327)
++++. +.|.+||..++ .++.+.. ...+.....++++|+
T Consensus 320 ~v~n~-~~v~v~D~~t~---~l~~~~~i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 320 LTLDG-GNVNVYDISQP---EPKLLRTIEGAAEASLQVQFHPV 358 (361)
T ss_dssp EEECS-SCEEEEECSSS---SCEEEEEETTSCSSEEEEEECCC
T ss_pred EEeCC-CeEEEEECCCC---cceeeEEeccCCCCcEEEEecCC
Confidence 87776 99999999887 4555555 356778899999997
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=6.1e-21 Score=157.88 Aligned_cols=258 Identities=11% Similarity=0.154 Sum_probs=171.8
Q ss_pred CCccEEEEEe--CCCEEEEecCC----CeEEEEEccc--cc--cccccccccccEEEEEECCCCCeEEEec-CCCcEEEE
Q psy7482 13 HTASVRSVAA--TSKLAASSGAD----ETVVLYDMVK--RK--QSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIF 81 (327)
Q Consensus 13 h~~~v~~~~~--~~~~l~~~~~d----g~v~~w~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw 81 (327)
|...+..++| ++++|++++.+ +.|.+|++.. ++ .+.....+......+++ ++++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 5566666777 89989988875 7999999865 33 23333335556777888 777777665 57899999
Q ss_pred EcCCCeEEEeEE--eccc----------CCceeeEEEecCCCEEEEEe-CCCCEEEEEcCCCce------e------eee
Q psy7482 82 RVGSWQLEKLFK--KAHK----------GTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRS------A------YIT 136 (327)
Q Consensus 82 ~~~~~~~~~~~~--~~~~----------~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~------~------~~~ 136 (327)
++.....+..+. ..+. ...+.+++|+|+++++++++ .++.|.+|++..... + ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 997543222110 0111 11157899999999776665 478999999875442 1 111
Q ss_pred eccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCce--eeEec----CCCceeEEEeecC-ceEEEeCC--C
Q psy7482 137 NLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGV--LQTLK----SESKVHSVCFLNE-TTVCTGNE--E 205 (327)
Q Consensus 137 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~--~~~~~----~~~~i~~~~~~~~-~~l~~~~~--d 205 (327)
.... ...+..++|+|++++++++. ++.|.+||+.+++. +..+. +......++|+|| ++|+++.. +
T Consensus 206 ~~~~----~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~ 281 (361)
T 3scy_A 206 KVAP----GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA 281 (361)
T ss_dssp ECCT----TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred ecCC----CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence 1111 12378999999999776654 89999999987754 22232 2345689999999 55655544 5
Q ss_pred CcEEEEEcC--CCc--eeEEeeecccceEEEEEEecCCCcEEEEec-CCCeEEEEEc--CCCceeEEe-ecccCceEEEe
Q psy7482 206 SAITAYNLT--DGS--HLWQIKASASRIKGLVFFSIPQETTVCTGN-EESAITAYNL--TDGSHLWHI-KASASRIKGLA 277 (327)
Q Consensus 206 ~~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~--~~~~~~~~~-~~~~~~v~~~~ 277 (327)
+.|.+|++. +++ .+..+.. ...+..++| +|+|++|++++ .++.|.+|++ .+++..... ..+...+.++.
T Consensus 282 ~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~--spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~ 358 (361)
T 3scy_A 282 DGVAIFKVDETNGTLTKVGYQLT-GIHPRNFII--TPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLK 358 (361)
T ss_dssp CEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEE--CTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEE
T ss_pred CEEEEEEEcCCCCcEEEeeEecC-CCCCceEEE--CCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEE
Confidence 899999996 344 3444443 446788999 59999888876 6789999655 466654433 22345678888
Q ss_pred ee
Q psy7482 278 SH 279 (327)
Q Consensus 278 ~~ 279 (327)
|.
T Consensus 359 ~~ 360 (361)
T 3scy_A 359 FV 360 (361)
T ss_dssp EE
T ss_pred Ec
Confidence 75
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=4.4e-22 Score=166.32 Aligned_cols=281 Identities=8% Similarity=0.074 Sum_probs=190.0
Q ss_pred eeccCCccEEE-----EEe--CCCEEEEecC-CC--eEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcE
Q psy7482 9 VTHSHTASVRS-----VAA--TSKLAASSGA-DE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSI 78 (327)
Q Consensus 9 ~~~~h~~~v~~-----~~~--~~~~l~~~~~-dg--~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 78 (327)
.+..|...... .+| ||++|+.++. +| .|.+||+.+++......++...+..+.|+||++.|+.++.++.|
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l 104 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNL 104 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEE
T ss_pred EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeE
Confidence 34456655555 556 8998888876 66 48888999888877777676666677899999999999999999
Q ss_pred EEEEcCCCeEEEeEEecccCCceeeEE--EecCCCEEEEEe----------------------CCCCEEEEEcCCCceee
Q psy7482 79 AIFRVGSWQLEKLFKKAHKGTAVNHIS--IHPSGKLALSVG----------------------KDKTLRTWNLVKGRSAY 134 (327)
Q Consensus 79 ~iw~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~----------------------~dg~i~iwd~~~~~~~~ 134 (327)
++||+.+++..... ..+... +.... +++++++++... .+..|.+||+.+++...
T Consensus 105 ~~~d~~~g~~~~~~-~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 182 (388)
T 3pe7_A 105 MRVDLATLEENVVY-QVPAEW-VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV 182 (388)
T ss_dssp EEEETTTCCEEEEE-ECCTTE-EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE
T ss_pred EEEECCCCcceeee-echhhc-ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE
Confidence 99999998876665 444443 43333 478998887432 34679999999887655
Q ss_pred eeeccccCccccceEEEEEcc-CCcEEEeec-C------CeEEEEEecCCceeeEecCC--CceeEEEeecC-ceEEEeC
Q psy7482 135 ITNLSSYGVGFENLDSVVWSP-EGLLYAIPI-Q------NKAVVFSVEKAGVLQTLKSE--SKVHSVCFLNE-TTVCTGN 203 (327)
Q Consensus 135 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~------~~i~i~d~~~~~~~~~~~~~--~~i~~~~~~~~-~~l~~~~ 203 (327)
...... .+..+.|+| +++.++... + ..|.++|...++......+. ..+....|+|| ..|+..+
T Consensus 183 l~~~~~------~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 183 ILQENQ------WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp EEEESS------CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred eecCCc------cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEe
Confidence 443332 288999999 999887665 2 26778887665543333333 35778899999 5454432
Q ss_pred -CC----CcEEEEEcCCCcee--EEeeecccc---eEEEEEEecCCCcEEEEe---------cCCCeEEEEEcCCCceeE
Q psy7482 204 -EE----SAITAYNLTDGSHL--WQIKASASR---IKGLVFFSIPQETTVCTG---------NEESAITAYNLTDGSHLW 264 (327)
Q Consensus 204 -~d----~~i~i~d~~~~~~~--~~~~~~~~~---v~~~~~~~s~~~~~l~~~---------~~d~~i~i~d~~~~~~~~ 264 (327)
.+ ..|++||+.+++.. ..+..+... ...+.|+ |+|+.|+.. ..+..|++||+.+++. .
T Consensus 257 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~s--pdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~ 333 (388)
T 3pe7_A 257 YLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMV--GDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-H 333 (388)
T ss_dssp EETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEE--EEECCC------------CCCCEEEEEETTTTEE-E
T ss_pred cCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEc--cCCCcceeEeeeccccccCCCCEEEEEeccCCce-E
Confidence 22 23999999988743 223221110 1123564 889888754 4567899999988764 4
Q ss_pred EeecccC-----------ceEEEeeeC--cEEEE-EecCCcEEEEEccCc
Q psy7482 265 HIKASAS-----------RIKGLASHR--NHLIC-ITSAGDLVVWELNED 300 (327)
Q Consensus 265 ~~~~~~~-----------~v~~~~~~~--~~l~~-~~~dg~v~iw~~~~~ 300 (327)
.+..+.. .+..++|+| +.|+. +..+|...+|.++-.
T Consensus 334 ~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 334 RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 4555554 578889999 55554 445787777776544
No 161
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=1.6e-22 Score=170.72 Aligned_cols=196 Identities=13% Similarity=0.109 Sum_probs=147.8
Q ss_pred eeeEEEecCCCEEEEEeCCCCEEEEEcCCCce--------eeeeeccc--cCccccceEEEEEccCCcEEE----eec-C
Q psy7482 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRS--------AYITNLSS--YGVGFENLDSVVWSPEGLLYA----IPI-Q 165 (327)
Q Consensus 101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--------~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~----~~~-~ 165 (327)
++.+++++++.++++++.++ +++|+...... ........ .-.+...+.+++|+|++++|+ +++ |
T Consensus 39 ~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d 117 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYG 117 (434)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTE
T ss_pred ccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCC
Confidence 88999999999999999888 99987542110 00000000 001123599999999999998 565 8
Q ss_pred CeEEEEEecCC--------cee---eEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEE
Q psy7482 166 NKAVVFSVEKA--------GVL---QTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKG 231 (327)
Q Consensus 166 ~~i~i~d~~~~--------~~~---~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~ 231 (327)
+.|++||++++ +.+ ..+. |...|.+++|+|+ .++++++.||.|++||++++..+....+|...+.+
T Consensus 118 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~ 197 (434)
T 2oit_A 118 SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTS 197 (434)
T ss_dssp EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEE
T ss_pred ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeE
Confidence 99999998765 222 2233 6789999999996 68999999999999999998777677788999999
Q ss_pred EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc-------CceEEEeeeC--cEEEE-EecCCc------EEEE
Q psy7482 232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA-------SRIKGLASHR--NHLIC-ITSAGD------LVVW 295 (327)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~v~~~~~~~--~~l~~-~~~dg~------v~iw 295 (327)
++|+ |+|++|++|+.||.|++||++ ++....+..|. ..|.+++|++ .++++ .+.||. +++|
T Consensus 198 v~ws--pdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~ 274 (434)
T 2oit_A 198 VCWS--PKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMA 274 (434)
T ss_dssp EEEC--TTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEE
T ss_pred EEEc--CCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEE
Confidence 9995 899999999999999999998 56555555442 3899999999 33322 334433 8999
Q ss_pred EccCc
Q psy7482 296 ELNED 300 (327)
Q Consensus 296 ~~~~~ 300 (327)
++...
T Consensus 275 ~l~~~ 279 (434)
T 2oit_A 275 LLPKK 279 (434)
T ss_dssp ECCCT
T ss_pred EeccC
Confidence 99865
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.90 E-value=4.5e-22 Score=179.59 Aligned_cols=304 Identities=12% Similarity=0.133 Sum_probs=197.2
Q ss_pred CccEEEEEe--CCCEEEEecCCCeEEEEEcccccccccccccccc-----EEEEEECCCCCeEEEecCC---------Cc
Q psy7482 14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT-----ITCLKFTPEGSHLISCSDD---------GS 77 (327)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------~~ 77 (327)
.....+++| ++++++++ |+.|++||+.+++....+.+|... ...++|||||++|+.++.+ +.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 344667888 88888886 899999999999877666666532 2447899999999988876 56
Q ss_pred EEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCc----c---------
Q psy7482 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGV----G--------- 144 (327)
Q Consensus 78 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~--------- 144 (327)
+.+||+.+++... + ..+... +...+|+|||+.|+.+. ++.|++|++.+++............ .
T Consensus 94 ~~~~d~~~~~~~~-l-~~~~~~-~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 94 YDIYDLNKRQLIT-E-ERIPNN-TQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEETTTTEECC-S-SCCCTT-EEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred EEEEECCCCcEEE-c-ccCCCc-ceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 7799999988654 3 455555 99999999999999885 6899999998877544322111100 0
Q ss_pred ccceEEEEEccCCcEEEeec--CC-----------------------------------eEEEEEecC---Cc--eeeEe
Q psy7482 145 FENLDSVVWSPEGLLYAIPI--QN-----------------------------------KAVVFSVEK---AG--VLQTL 182 (327)
Q Consensus 145 ~~~v~~~~~~~~~~~l~~~~--~~-----------------------------------~i~i~d~~~---~~--~~~~~ 182 (327)
......+.|||||+.|+... ++ .|++||+.+ ++ ....+
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 01124589999999888763 11 578899888 63 22223
Q ss_pred c-------CCCceeEEEeecCce-EEEe----CCCCcEEEEEcCCCc----e--eEEe--eecccceE-----EEEEEec
Q psy7482 183 K-------SESKVHSVCFLNETT-VCTG----NEESAITAYNLTDGS----H--LWQI--KASASRIK-----GLVFFSI 237 (327)
Q Consensus 183 ~-------~~~~i~~~~~~~~~~-l~~~----~~d~~i~i~d~~~~~----~--~~~~--~~~~~~v~-----~~~~~~s 237 (327)
. +...+..++|+||+. ++.. ..+..|.+||+.+++ + +..+ ..|...+. ...| +
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f--s 327 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHF--T 327 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEE--C
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceE--c
Confidence 2 455688999999954 4332 234479999999887 2 2222 34555444 6778 5
Q ss_pred CCCcEEE-EecC-C--CeEEEEEcCCCceeEEeecccCceEEEe-eeC-cEEEEEec----CCcEEEEEccCccCCCcee
Q psy7482 238 PQETTVC-TGNE-E--SAITAYNLTDGSHLWHIKASASRIKGLA-SHR-NHLICITS----AGDLVVWELNEDVTREPQR 307 (327)
Q Consensus 238 ~~~~~l~-~~~~-d--~~i~i~d~~~~~~~~~~~~~~~~v~~~~-~~~-~~l~~~~~----dg~v~iw~~~~~~~~~~~~ 307 (327)
|||+.++ ..+. + ..|++||+.+++...... ....+..+. ++. .++++++. .+...||.++.........
T Consensus 328 pDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~-g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~ 406 (740)
T 4a5s_A 328 LDGNSFYKIISNEEGYRHICYFQIDKKDCTFITK-GTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTC 406 (740)
T ss_dssp TTSSEEEEEEECTTSCEEEEEEETTCSSCEESCC-SSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEEEcCCCceEEEEEECCCCceEeccc-CCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCccee
Confidence 9999876 5543 3 468889987766544333 344455443 445 44555554 3456666655432111112
Q ss_pred eeec--CCCCceEEEEeCCCC
Q psy7482 308 VSAT--NDGCRFTCLAIRPPV 326 (327)
Q Consensus 308 ~~~~--~~~~~i~~l~~~p~~ 326 (327)
+... ..........|+|+.
T Consensus 407 lt~~~~~~~~~~~~~~~S~dg 427 (740)
T 4a5s_A 407 LSCELNPERCQYYSVSFSKEA 427 (740)
T ss_dssp SSTTTSTTTBCBEEEEECTTS
T ss_pred eccccCCCCCceEEEEECCCC
Confidence 2111 123567788888863
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=2.4e-21 Score=161.87 Aligned_cols=276 Identities=12% Similarity=0.083 Sum_probs=187.5
Q ss_pred EEEccccccccccccccccEEE-----EEECCCCCeEEEecC-CC--cEEEEEcCCCeEEEeEEecccCCceeeEEEecC
Q psy7482 38 LYDMVKRKQSGALMQHEGTITC-----LKFTPEGSHLISCSD-DG--SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS 109 (327)
Q Consensus 38 ~w~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~~~-d~--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 109 (327)
.+|..++.....+..|...... .+|+|||++|+.++. ++ .|.+||+.+++..... ..+... +..+.|+||
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt-~~~~~~-~~~~~~spd 91 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT-EGRGDN-TFGGFLSPD 91 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC-CSSCBC-SSSCEECTT
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee-eCCCCC-ccceEEcCC
Confidence 4566777777777777766666 889999999998887 66 4888899988876655 444443 557789999
Q ss_pred CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEE--EEEccCCcEEEee-----------------------c
Q psy7482 110 GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDS--VVWSPEGLLYAIP-----------------------I 164 (327)
Q Consensus 110 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~-----------------------~ 164 (327)
++.|+.++.++.|++||+.+++.......+.. .+.. ..++|++++++.. .
T Consensus 92 g~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~-----~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (388)
T 3pe7_A 92 DDALFYVKDGRNLMRVDLATLEENVVYQVPAE-----WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKP 166 (388)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCC
T ss_pred CCEEEEEeCCCeEEEEECCCCcceeeeechhh-----cccccceeECCCCCeeccccccCcccccccccchhhhhhccCC
Confidence 99999999999999999999887665544432 1322 3458999888732 2
Q ss_pred CCeEEEEEecCCceeeEecCCCceeEEEeec-C-ceEEEeCC------CCcEEEEEcCCCceeEEeeecc--cceEEEEE
Q psy7482 165 QNKAVVFSVEKAGVLQTLKSESKVHSVCFLN-E-TTVCTGNE------ESAITAYNLTDGSHLWQIKASA--SRIKGLVF 234 (327)
Q Consensus 165 ~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~ 234 (327)
+..|.+||+.+++......+...+..+.|+| + +.++.... ...|.++|...++. ..+..+. ..+...+|
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFW 245 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEE
T ss_pred cceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceE
Confidence 4689999999988766666777899999999 8 55655443 33788888765543 3443343 35777888
Q ss_pred EecCCCcEEEEecC-----CCeEEEEEcCCCce--eEEeecccCc---eEEEeeeC--cEEEEE---------ecCCcEE
Q psy7482 235 FSIPQETTVCTGNE-----ESAITAYNLTDGSH--LWHIKASASR---IKGLASHR--NHLICI---------TSAGDLV 293 (327)
Q Consensus 235 ~~s~~~~~l~~~~~-----d~~i~i~d~~~~~~--~~~~~~~~~~---v~~~~~~~--~~l~~~---------~~dg~v~ 293 (327)
+|+|+.|+..+. +..|++||+.+++. +..+.++... .....|+| +.|+.. ..+..|+
T Consensus 246 --spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~ 323 (388)
T 3pe7_A 246 --VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLY 323 (388)
T ss_dssp --CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEE
T ss_pred --CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEE
Confidence 599997765433 12499999998874 3333331111 12236888 555533 4466899
Q ss_pred EEEccCccCCCceeeeecCCC---------CceEEEEeCCCC
Q psy7482 294 VWELNEDVTREPQRVSATNDG---------CRFTCLAIRPPV 326 (327)
Q Consensus 294 iw~~~~~~~~~~~~~~~~~~~---------~~i~~l~~~p~~ 326 (327)
+||+..+ ....+...... ..+.+++|+|+.
T Consensus 324 ~~d~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg 362 (388)
T 3pe7_A 324 VFNMKNG---TQHRVARHDTSWKVFEGDRQVTHPHPSFTPDD 362 (388)
T ss_dssp EEETTTT---EEEEEEECCCCCCCBTTBSSTTCCCCEECTTS
T ss_pred EEeccCC---ceEEeccccCcccccccccccCCCCccCCCCC
Confidence 9999887 33334322210 046788899873
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=2.4e-22 Score=181.12 Aligned_cols=232 Identities=12% Similarity=0.076 Sum_probs=167.9
Q ss_pred EEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccC--CceeeEEEecCCCEEEEEeC---------CCCEEEEEc
Q psy7482 59 CLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG--TAVNHISIHPSGKLALSVGK---------DKTLRTWNL 127 (327)
Q Consensus 59 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~ 127 (327)
.++|+|++++++++ .|+.|++||+.+++....+ ..+.. ..+.+++|+|||++|++++. ++.|++||+
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTIL-SNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEE-CHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEE-ccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 68999999665554 6999999999999877666 44432 12889999999999998876 689999999
Q ss_pred CCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec--CCCc-----------------e
Q psy7482 128 VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK--SESK-----------------V 188 (327)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~--~~~~-----------------i 188 (327)
.+++......+.. .+..++|+|||+.|+.+.++.|++||+.+++...... +... .
T Consensus 98 ~~g~~~~~~~l~~------~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 98 SNGEFVRGNELPR------PIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp TTTEECCSSCCCS------SBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred CCCccccceecCc------ccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 9887622122222 2888999999999999999999999998887654332 1121 2
Q ss_pred eEEEeecC-ceEEEeCCCC----------------------------------cEEEEEcCCCcee--------EEeeec
Q psy7482 189 HSVCFLNE-TTVCTGNEES----------------------------------AITAYNLTDGSHL--------WQIKAS 225 (327)
Q Consensus 189 ~~~~~~~~-~~l~~~~~d~----------------------------------~i~i~d~~~~~~~--------~~~~~~ 225 (327)
.+++|+|| ..|++++.|. .|++||+.+++.. ..+.+|
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 48999999 6787776442 7889999887642 123357
Q ss_pred ccceEEEEEEecCCCcEEEEecCC----CeEEEEE----cCCCceeEEe----ecccCceE-----EEeeeC--cEEE--
Q psy7482 226 ASRIKGLVFFSIPQETTVCTGNEE----SAITAYN----LTDGSHLWHI----KASASRIK-----GLASHR--NHLI-- 284 (327)
Q Consensus 226 ~~~v~~~~~~~s~~~~~l~~~~~d----~~i~i~d----~~~~~~~~~~----~~~~~~v~-----~~~~~~--~~l~-- 284 (327)
...+..++| +||++++++.... ..|.+|| +.+++....+ ..|...+. .+.|+| +.|+
T Consensus 252 ~~~~~~~~~--SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 252 DYYFSWLTW--VTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp CEEEEEEEE--SSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred cceEEEeEE--eCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 778999999 4898877774322 3588899 7777765555 46666666 789999 4333
Q ss_pred EEecCCc--EEEEEccCc
Q psy7482 285 CITSAGD--LVVWELNED 300 (327)
Q Consensus 285 ~~~~dg~--v~iw~~~~~ 300 (327)
+...+|. |.+|++..+
T Consensus 330 ~~~~~g~~~l~~~~~~~~ 347 (719)
T 1z68_A 330 FSDKDGYKHIHYIKDTVE 347 (719)
T ss_dssp EECTTSCEEEEEESSCST
T ss_pred EEccCCceEEEEEECCCC
Confidence 4556665 566666554
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.89 E-value=1.6e-20 Score=167.68 Aligned_cols=278 Identities=8% Similarity=0.023 Sum_probs=186.8
Q ss_pred ccCCccEEEEEeCCCE--EEEe--cCCCeEEEEEccccccccccccccccEE---------EEEEC--CCCCe-EEEecC
Q psy7482 11 HSHTASVRSVAATSKL--AASS--GADETVVLYDMVKRKQSGALMQHEGTIT---------CLKFT--PEGSH-LISCSD 74 (327)
Q Consensus 11 ~~h~~~v~~~~~~~~~--l~~~--~~dg~v~~w~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~~~~ 74 (327)
.+|...+..++++++. +++. +.++...||....+.....+..+...+. ...|+ |||+. |+.++.
T Consensus 20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~ 99 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF 99 (662)
T ss_dssp HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT
T ss_pred hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC
Confidence 4688999999995544 4444 4588999999655555555666665555 55565 99998 776554
Q ss_pred -CCcEEEEEcC--C-CeEEEeEEec-----ccCCceeeEEEecCCCEEEEEeCC----------CCEEEEEcCC------
Q psy7482 75 -DGSIAIFRVG--S-WQLEKLFKKA-----HKGTAVNHISIHPSGKLALSVGKD----------KTLRTWNLVK------ 129 (327)
Q Consensus 75 -d~~i~iw~~~--~-~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~------ 129 (327)
+..|.++++. . ++ ...+ .. +... +..++|+|||+.|++++.+ ..|++||+.+
T Consensus 100 ~~~~l~~~~~~~~g~~~-~~~l-~~~~~~~~~~~-~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 100 GDQRLYAFEPDAPGGAV-PRPL-TPVSAVGGGLR-WADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp TTCCEEEECTTSTTCCC-CEEC-SCCCCSTTCEE-EEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred CCCeEEEEcCCCCCCCC-CEec-cCCccCCCCcc-ccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 5667777765 2 43 3333 23 3344 8899999999999998876 5899999987
Q ss_pred CceeeeeeccccCccccceEEEEEccCCcEEEeec-C--------CeEEEEEec-CC---ceeeEec-CCCceeEEEeec
Q psy7482 130 GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q--------NKAVVFSVE-KA---GVLQTLK-SESKVHSVCFLN 195 (327)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~--------~~i~i~d~~-~~---~~~~~~~-~~~~i~~~~~~~ 195 (327)
++..... . .. ...+..++|+|||+.|+.++ + ..|++||+. ++ +...... +...+..+.|+|
T Consensus 177 ~~~~~l~-~-~~---~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp 251 (662)
T 3azo_A 177 SAVRELS-D-DA---HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP 251 (662)
T ss_dssp GGSEESS-C-SC---SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT
T ss_pred CceeEEE-e-cC---CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC
Confidence 5443222 0 11 12377889999999888765 4 379999998 56 3333333 467899999999
Q ss_pred C-ceEEEeCCCC--cEEEEEcCCCceeEEeeecccc--------eEEEEEEecCCCcEEEEecCCCeEEEE--EcCCCce
Q psy7482 196 E-TTVCTGNEES--AITAYNLTDGSHLWQIKASASR--------IKGLVFFSIPQETTVCTGNEESAITAY--NLTDGSH 262 (327)
Q Consensus 196 ~-~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~--------v~~~~~~~s~~~~~l~~~~~d~~i~i~--d~~~~~~ 262 (327)
| .+++++..++ .|.+||+.+++.......+... +..++| +++++++++++. +.++|| |+.+++
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~--~~~~~~~~~~~~-~~~~l~~~d~~~~~- 327 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAP--LANGLIAVVHGK-GAAVLGILDPESGE- 327 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEE--CTTSCEEEEEBS-SSCEEEEEETTTTE-
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeE--eCCCEEEEEEEc-CccEEEEEECCCCc-
Confidence 9 5666777777 5666676566554333333222 456777 489999999998 999999 554454
Q ss_pred eEEeecccCceEEE-eeeC-cEEEE-EecCCc--EEEEEccCc
Q psy7482 263 LWHIKASASRIKGL-ASHR-NHLIC-ITSAGD--LVVWELNED 300 (327)
Q Consensus 263 ~~~~~~~~~~v~~~-~~~~-~~l~~-~~~dg~--v~iw~~~~~ 300 (327)
+..+..|...+..+ ++++ .++++ ++.+.. |.+|++.++
T Consensus 328 ~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 328 LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 67788787788887 7776 33333 344443 444555444
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=2.7e-20 Score=153.08 Aligned_cols=245 Identities=9% Similarity=0.074 Sum_probs=165.4
Q ss_pred cEEEEEe--CCCEE-EEecCCCeEEEEEccccccccccccc------cccEEEEEECCCCCeEEEecCC-----------
Q psy7482 16 SVRSVAA--TSKLA-ASSGADETVVLYDMVKRKQSGALMQH------EGTITCLKFTPEGSHLISCSDD----------- 75 (327)
Q Consensus 16 ~v~~~~~--~~~~l-~~~~~dg~v~~w~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d----------- 75 (327)
.+..+++ +++++ +++..++.|.+||+.+++....+..+ ...+..++|+|+|++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 4667777 77755 56667899999999998877666532 2337889999999999988865
Q ss_pred -CcEEEEEcCCCeEEEeEE-ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc---------
Q psy7482 76 -GSIAIFRVGSWQLEKLFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG--------- 144 (327)
Q Consensus 76 -~~i~iw~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--------- 144 (327)
+.|.+||+.+++....+. ..+... +.+++|+|+++ +++++ +.|.+||+.+++....+........
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPMPRQ-VYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECCSS-CCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred CCeEEEEECCCccccceeeeccCCCc-ccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCcccee
Confidence 899999998854332221 122334 88999999999 66554 4499999998887665544321000
Q ss_pred ----------ccceEEEEEccCCcEEEeec--CCeEEEEEecCCceee-Ee-cCCCceeEEEeec-C-ceEEEeCCCCcE
Q psy7482 145 ----------FENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQ-TL-KSESKVHSVCFLN-E-TTVCTGNEESAI 208 (327)
Q Consensus 145 ----------~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~-~~-~~~~~i~~~~~~~-~-~~l~~~~~d~~i 208 (327)
......+++++++....... ...+..+|..+++... .+ .....+..++++| + ++++++ ++.|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v 277 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRL 277 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEE
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeE
Confidence 00244566766542211111 1122224444433211 11 1456788999999 8 666666 8899
Q ss_pred EEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc
Q psy7482 209 TAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS 269 (327)
Q Consensus 209 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 269 (327)
.+||+.+++.+..+... ..+.+++| +|++++|++++.++.|.+||+.+++.+..+..+
T Consensus 278 ~~~d~~~~~~~~~~~~~-~~~~~~~~--s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 278 AKYDLKQRKLIKAANLD-HTYYCVAF--DKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEETTTTEEEEEEECS-SCCCEEEE--CSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EEEECccCeEEEEEcCC-CCccceEE--CCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 99999999887777643 34678899 489999888888999999999999988887655
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=2.2e-20 Score=154.67 Aligned_cols=241 Identities=12% Similarity=0.121 Sum_probs=165.2
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEcc-ccccccccccc-cccEEEEEECCCCCe--EEEec-------------CC
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMV-KRKQSGALMQH-EGTITCLKFTPEGSH--LISCS-------------DD 75 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~~~-------------~d 75 (327)
..+..+++ ++++|++++.+ .|.+|++. +++........ .+.+.+++|+|+|++ ++++. .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 45677888 89999988877 99999997 67654332211 123556899999994 55654 68
Q ss_pred CcEEEEEcC-CCeEEEeEEe---cccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcC-CCceeeeeeccccCccccceE
Q psy7482 76 GSIAIFRVG-SWQLEKLFKK---AHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLV-KGRSAYITNLSSYGVGFENLD 149 (327)
Q Consensus 76 ~~i~iw~~~-~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~ 149 (327)
+.+.+|++. +++....+.. .+... +.+++|+|+|++++++.. ++.|.+||+. +++.......... .+...+.
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~-~~g~~p~ 196 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTG-IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP-DPGDHPR 196 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCC-EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS-STTCCEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCc-ceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC-CCCCCCC
Confidence 999999997 4665544421 13334 899999999998887764 6799999998 6765332222100 0112388
Q ss_pred EEEEccCCcEEEeec--CCeEEEEEec--CCcee---eEec---CC----C-------ceeEEE-eecC-ceEEEeCCC-
Q psy7482 150 SVVWSPEGLLYAIPI--QNKAVVFSVE--KAGVL---QTLK---SE----S-------KVHSVC-FLNE-TTVCTGNEE- 205 (327)
Q Consensus 150 ~~~~~~~~~~l~~~~--~~~i~i~d~~--~~~~~---~~~~---~~----~-------~i~~~~-~~~~-~~l~~~~~d- 205 (327)
.++|+|+|++++++. ++.+.+|++. +++.. ..+. .. . .+..++ |+|| ++|+++..+
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 999999999887765 6899999875 45432 1222 11 1 488999 9999 566665432
Q ss_pred C-----cEEEEEcC-CCceeE---EeeecccceEEEEEEecC---CCcEEEEecCC-CeEEEEEcCCC
Q psy7482 206 S-----AITAYNLT-DGSHLW---QIKASASRIKGLVFFSIP---QETTVCTGNEE-SAITAYNLTDG 260 (327)
Q Consensus 206 ~-----~i~i~d~~-~~~~~~---~~~~~~~~v~~~~~~~s~---~~~~l~~~~~d-~~i~i~d~~~~ 260 (327)
+ .|.+|++. +++... ....+......++|+ | +|++|++++.+ +.|.+|++...
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~s--p~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVS--PCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEE--ECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceec--CCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2 89999996 555433 133344456778885 7 89999988864 89999998765
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.88 E-value=5.9e-19 Score=141.15 Aligned_cols=238 Identities=11% Similarity=0.135 Sum_probs=174.1
Q ss_pred cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc------cccccEEEEEE-CCCCCeEEEecC-CCcEEEE
Q psy7482 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM------QHEGTITCLKF-TPEGSHLISCSD-DGSIAIF 81 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~------~~~~~v~~~~~-~~~~~~l~~~~~-d~~i~iw 81 (327)
+|-..+.++++ +++++++...++.|.+||.. ++....+. ++...+..+++ .++++++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 45677899999 78888888889999999976 55554443 24457899999 567776666543 7899999
Q ss_pred EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482 82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA 161 (327)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 161 (327)
| .+++....+...+... +..++++++++++++...++.|.+||.. ++....+.... +...+..++++|++++++
T Consensus 106 d-~~g~~~~~~~~~~~~~-~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~---~~~~p~~i~~~~~g~l~v 179 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQH-PRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSK---HLEFPNGVVVNDKQEIFI 179 (286)
T ss_dssp C-TTSCEEEEECTTTCSC-EEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTT---TCSSEEEEEECSSSEEEE
T ss_pred C-CCCcEEEEecCccCCC-ceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCC---ccCCcEEEEECCCCCEEE
Confidence 9 5677766663333344 8999999999887777778899999964 55444433221 123488999999999877
Q ss_pred eec-CCeEEEEEecCCceeeEecCC---CceeEEEeecC-ceEEEeCCCC-cEEEEEcCCCceeEEeeeccc--ceEEEE
Q psy7482 162 IPI-QNKAVVFSVEKAGVLQTLKSE---SKVHSVCFLNE-TTVCTGNEES-AITAYNLTDGSHLWQIKASAS--RIKGLV 233 (327)
Q Consensus 162 ~~~-~~~i~i~d~~~~~~~~~~~~~---~~i~~~~~~~~-~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~--~v~~~~ 233 (327)
+.. ++.|++||. +++.+..+... ..+..++++++ .++++...++ .|.+||. +++.+..+..+.. .+.+++
T Consensus 180 ~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~ 257 (286)
T 1q7f_A 180 SDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVA 257 (286)
T ss_dssp EEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEE
T ss_pred EECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEE
Confidence 766 899999997 45566666532 57899999998 5555555665 9999995 5667777765543 367888
Q ss_pred EEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482 234 FFSIPQETTVCTGNEESAITAYNLTDGS 261 (327)
Q Consensus 234 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~ 261 (327)
+. |+|+++++ +.|+.|++|++....
T Consensus 258 ~~--~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 258 LM--DDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EE--TTTEEEEE-ETTTEEEEEECSCCC
T ss_pred EC--CCCcEEEE-CCCCeEEEEEccccc
Confidence 85 89987777 568999999986543
No 169
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.87 E-value=2.9e-19 Score=141.53 Aligned_cols=240 Identities=11% Similarity=0.119 Sum_probs=185.0
Q ss_pred CCCEEEEecCCCeEEEEEcccccccccccccc-ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCce
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV 101 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v 101 (327)
.+++|++++.++.|.+||.++++.+..+..+. ..+.++.++|+|++|+ +.++.|..||. +++.+..+ .......+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~-~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNI-AAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEE-ECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEE-cCCCCccc
Confidence 36789999999999999999999999988765 4788999999999888 34678999999 79998888 44332338
Q ss_pred eeEEEecCCCEEEEEeC-CCCEEEEEcCCCceeeeeecccc-CccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce
Q psy7482 102 NHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSY-GVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV 178 (327)
Q Consensus 102 ~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~ 178 (327)
.++.+.++|+.+++.+. ++.+..+|. +++.+..+..... .........++..++|+++++.. ++.|..||.+ ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 89999999999998887 778888885 6777766655332 11223355677899999998886 8999999998 999
Q ss_pred eeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeeccc------ceEEEEEEecCCCcEEEEecCC--
Q psy7482 179 LQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASAS------RIKGLVFFSIPQETTVCTGNEE-- 249 (327)
Q Consensus 179 ~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~s~~~~~l~~~~~d-- 249 (327)
+..+.....+.++...++ +.++++..++.|..+|..+++.+.++..+.. .+..++.. ++|..+++....
T Consensus 158 ~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~--~~G~i~v~~~~g~~ 235 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL--QNGGLYICNWQGHD 235 (276)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEEC--TTSCEEEEEECTTC
T ss_pred EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEc--CCCCEEEEeccCcc
Confidence 999986666777888887 6777777788999999999999999864431 25666663 888888876321
Q ss_pred ------CeEEEEEc-CCCceeEEeeccc
Q psy7482 250 ------SAITAYNL-TDGSHLWHIKASA 270 (327)
Q Consensus 250 ------~~i~i~d~-~~~~~~~~~~~~~ 270 (327)
+..+++++ .+++.++++....
T Consensus 236 ~~~~~~~~~~~~~~~~~g~~~W~~~~~~ 263 (276)
T 3no2_A 236 REAGKGKHPQLVEIDSEGKVVWQLNDKV 263 (276)
T ss_dssp TTGGGSCCCSEEEECTTSBEEEEECCTT
T ss_pred ccccccCCceEEEECCCCCEEEEecCcc
Confidence 23456665 5778888877554
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=5.5e-19 Score=144.14 Aligned_cols=242 Identities=13% Similarity=0.139 Sum_probs=182.1
Q ss_pred cccEEEEEECCCCCeEEEecCC------------------------CcEEEEEcCCCeEEEeEEecccCCceeeEEEecC
Q psy7482 54 EGTITCLKFTPEGSHLISCSDD------------------------GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS 109 (327)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d------------------------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 109 (327)
-+.+.+++++|+|+++++...+ +.|.+||..+++....+...+... +..++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYL-PHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSS-EEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCC-ceEEEECCC
Confidence 4569999999999988887777 479999999888877663334445 899999999
Q ss_pred CCEEEEEeCCCCEEEEEcCCCc-eeeeeecccc----CccccceEEEEEcc-CCcEEEeec--CCeEEEEEecCCceeeE
Q psy7482 110 GKLALSVGKDKTLRTWNLVKGR-SAYITNLSSY----GVGFENLDSVVWSP-EGLLYAIPI--QNKAVVFSVEKAGVLQT 181 (327)
Q Consensus 110 ~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~----~~~~~~v~~~~~~~-~~~~l~~~~--~~~i~i~d~~~~~~~~~ 181 (327)
++++++...++.|+.||..... .+..+..... ..+...+..++++| ++.++++.+ ++.|++|| .+++.+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 9988888888999999975432 2322211100 11233488999999 788888873 78999999 56777777
Q ss_pred ecC-C----------CceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEee--ecccceEEEEEEecCCCcEEEE-
Q psy7482 182 LKS-E----------SKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIK--ASASRIKGLVFFSIPQETTVCT- 245 (327)
Q Consensus 182 ~~~-~----------~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~s~~~~~l~~- 245 (327)
+.. . ..+..++++|+ +. +++...++.|++||..+++.+..+. .+...+..+++. | +..+.+
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--p-g~~~~~~ 257 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYI--P-GFLFAVN 257 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEE--T-TEEEEEE
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeec--C-CEEEEeC
Confidence 651 1 23889999997 54 5566788899999998888888774 345567888885 6 433333
Q ss_pred ------ecCCCeEEEEEcCCCceeEEee---cccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 246 ------GNEESAITAYNLTDGSHLWHIK---ASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 246 ------~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
...+..|++||..+++.+..+. ++...+.+++++| .++++...++.|++|++...
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 3345589999999999888874 5667789999999 67788888999999998765
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.87 E-value=4.8e-19 Score=145.64 Aligned_cols=256 Identities=12% Similarity=0.129 Sum_probs=175.4
Q ss_pred ccEEEEEeCCCEEEEec---------CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---C--cEEE
Q psy7482 15 ASVRSVAATSKLAASSG---------ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---G--SIAI 80 (327)
Q Consensus 15 ~~v~~~~~~~~~l~~~~---------~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~--~i~i 80 (327)
..+...+++|+.++... .++.|.+||+.+++... + ..+..++|+|||+.|+.++.+ + .|.+
T Consensus 15 ~~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~ 89 (347)
T 2gop_A 15 AYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWV 89 (347)
T ss_dssp CEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEE
T ss_pred EEcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEE
Confidence 44555666888887542 25679999998876433 3 568889999999999887654 2 4888
Q ss_pred EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---------------------------CCEEEEEcCCCcee
Q psy7482 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---------------------------KTLRTWNLVKGRSA 133 (327)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------g~i~iwd~~~~~~~ 133 (327)
|++.+++..... ... . +..+.|+|+++.|+.++.+ ..|.+||+.+++..
T Consensus 90 ~~~~~g~~~~l~-~~~--~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 90 ADLETLSSKKIL-EAK--N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EETTTTEEEEEE-EES--E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EECCCCceEEEE-cCC--C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 898888766554 222 2 8899999999988887642 56999999888762
Q ss_pred eeeeccccCccccceEEEEEccCCcEEEeec-C------C-eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCC
Q psy7482 134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q------N-KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNE 204 (327)
Q Consensus 134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~------~-~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~ 204 (327)
..+... . +..+.|+|++ +++++. + . ...+|.+.+++......+ ..+..+ +|+ ..++.++.
T Consensus 166 ~~l~~~-~------~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~ 234 (347)
T 2gop_A 166 EEFEKP-R------FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGK 234 (347)
T ss_dssp EEEEEE-T------TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEEC
T ss_pred eeecCC-C------cccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEc
Confidence 333222 2 7889999999 766664 2 2 334444445544333334 444444 888 55665543
Q ss_pred C--------CcEEEEEcCCCceeEEeeecccceEE-EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEE
Q psy7482 205 E--------SAITAYNLTDGSHLWQIKASASRIKG-LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKG 275 (327)
Q Consensus 205 d--------~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~ 275 (327)
+ ..|.+|| +++.......+...+.. +.| + ++ ++++++.++.+++| +.+++. ..+..+...|.+
T Consensus 235 ~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~--s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~ 306 (347)
T 2gop_A 235 PEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIK--D-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMG 306 (347)
T ss_dssp CSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEE--T-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEE
T ss_pred cccCCccccceEEEEC--CCceEeccccCCcccCCccEE--c-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEe
Confidence 3 4688888 55544444556667776 777 4 77 88899999999999 876655 344445778999
Q ss_pred EeeeCcEEEEEecCCcE-EEEEcc
Q psy7482 276 LASHRNHLICITSAGDL-VVWELN 298 (327)
Q Consensus 276 ~~~~~~~l~~~~~dg~v-~iw~~~ 298 (327)
++|+|.++++++.++.. .+|.++
T Consensus 307 ~~~s~~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 307 FDVDEIVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEESSSEEEEEECSSSCCEEEEES
T ss_pred eeeeCcEEEEEcCCCChHHheEeC
Confidence 99998666677777765 888876
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=4.9e-19 Score=144.41 Aligned_cols=242 Identities=13% Similarity=0.121 Sum_probs=181.2
Q ss_pred CccEEEEEe--CCCEEEEecCC------------------------CeEEEEEccccccccccc-cccccEEEEEECCCC
Q psy7482 14 TASVRSVAA--TSKLAASSGAD------------------------ETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEG 66 (327)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~d------------------------g~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 66 (327)
-+.+.++++ +|+++++...+ +.|.+||..+++....+. ++-.....++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 467899999 78888888777 479999998888765554 344578999999999
Q ss_pred CeEEEecCCCcEEEEEcCCCe-EEEeEE--------ecccCCceeeEEEec-CCCEEEEEe-CCCCEEEEEcCCCceeee
Q psy7482 67 SHLISCSDDGSIAIFRVGSWQ-LEKLFK--------KAHKGTAVNHISIHP-SGKLALSVG-KDKTLRTWNLVKGRSAYI 135 (327)
Q Consensus 67 ~~l~~~~~d~~i~iw~~~~~~-~~~~~~--------~~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~~~~~~ 135 (327)
+++++...++.|++|+..... .+..+. ..+... ...++++| ++.++++.+ .++.|++|| .+++....
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~-P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQ-PTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSS-EEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCC-CcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 988888889999999986442 344441 122234 88999999 788777776 689999999 45666554
Q ss_pred eecccc-----CccccceEEEEEccC-CcEEEeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecCc-------e
Q psy7482 136 TNLSSY-----GVGFENLDSVVWSPE-GLLYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNET-------T 198 (327)
Q Consensus 136 ~~~~~~-----~~~~~~v~~~~~~~~-~~~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~-------~ 198 (327)
+..... ......+..++++|+ +.++++.. ++.|++||..+++.+..+. ....+..++++|.- .
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~ 260 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKP 260 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCE
Confidence 432221 112234889999998 66666665 8899999999898888885 45678899999931 1
Q ss_pred EEEeCCCCcEEEEEcCCCceeEEee---ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482 199 VCTGNEESAITAYNLTDGSHLWQIK---ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD 259 (327)
Q Consensus 199 l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~ 259 (327)
+++...+..|++||..+++.+..+. .+......+++ +|+|.++++...++.|++|++..
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~--~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVA--SEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEE--CTTSEEEEEESSSCCEEEEEEEE
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEE--CCCCCEEEEECCCCEEEEEeCCc
Confidence 2223345689999999999888873 56667889999 48998888888999999999754
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.86 E-value=6.8e-19 Score=143.92 Aligned_cols=264 Identities=14% Similarity=0.124 Sum_probs=186.2
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 92 (327)
..|.+++| ++..++..+.++.++.| .++....+..+...+.+++|+|++++++++..++.|.+||..+++.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 44667777 55566666778889999 34555566666677899999999998888888999999999887765544
Q ss_pred EecccCCceeeEEEecCCCEEEEEeCC----CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC---
Q psy7482 93 KKAHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ--- 165 (327)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--- 165 (327)
..+... +.+++++++++++++...+ +.|.+||.++++......... ....+..++++|+++++++...
T Consensus 83 -~~~~~~-~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~~~~ 157 (333)
T 2dg1_A 83 -VSHKAN-PAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS---TAYCIDDMVFDSKGGFYFTDFRGYS 157 (333)
T ss_dssp -ECSSSS-EEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS---SCCCEEEEEECTTSCEEEEECCCBT
T ss_pred -eCCCCC-cceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc---cCCcccceEECCCCCEEEEeccccc
Confidence 344455 9999999999887777665 689999988776542322111 1234889999999988877652
Q ss_pred ----CeEEEEEecCCceeeEecCCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCC-CceeEEe--------eecccceE
Q psy7482 166 ----NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTV-CTGNEESAITAYNLTD-GSHLWQI--------KASASRIK 230 (327)
Q Consensus 166 ----~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~-~~~~~~~--------~~~~~~v~ 230 (327)
+.|..+|..+++..........+..++|+|+ +.+ ++...++.|.+||+.+ +..+..+ .++ ..+.
T Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~ 236 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPD 236 (333)
T ss_dssp TBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEE
T ss_pred cCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCC
Confidence 5677777655554433334455789999999 444 4556688999999964 3333211 111 3567
Q ss_pred EEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC------ceEEEeeeC--cEEEEEecCC
Q psy7482 231 GLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS------RIKGLASHR--NHLICITSAG 290 (327)
Q Consensus 231 ~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~--~~l~~~~~dg 290 (327)
.+++ +++|+++++...++.|.+||. +++.+..+..+.. .+.+++|++ ..|+.++.++
T Consensus 237 ~i~~--d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 237 SCCI--DSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEE--BTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred ceEE--CCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 7888 488988888777899999998 5666666665433 688999988 4666665553
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=4.8e-18 Score=135.82 Aligned_cols=237 Identities=12% Similarity=0.189 Sum_probs=172.4
Q ss_pred cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe-----cccCCceeeEEEe-cCCCEEEEEeC-CCCEEE
Q psy7482 52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK-----AHKGTAVNHISIH-PSGKLALSVGK-DKTLRT 124 (327)
Q Consensus 52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~~-dg~i~i 124 (327)
++-..+.+++++++++++++...++.|.+||.. ++....+.. .+... +..+++. ++++++++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~-p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLY-PNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSS-EEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccC-ceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 455678999999999988888889999999987 555555521 12234 8899995 56665555533 789999
Q ss_pred EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecCc-eE
Q psy7482 125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNET-TV 199 (327)
Q Consensus 125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~-~l 199 (327)
|| .+++....+.... ...+..++++|+++++++.. ++.|.+||. .++.+..+. ....+..+++++++ ++
T Consensus 105 ~d-~~g~~~~~~~~~~----~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATI----LQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp EC-TTSCEEEEECTTT----CSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred EC-CCCcEEEEecCcc----CCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence 99 5566554442221 23488999999999887765 789999995 456666664 33568999999984 55
Q ss_pred EEeCCCCcEEEEEcCCCceeEEeeec--ccceEEEEEEecCCCcEEEEecCCC-eEEEEEcCCCceeEEeecccC--ceE
Q psy7482 200 CTGNEESAITAYNLTDGSHLWQIKAS--ASRIKGLVFFSIPQETTVCTGNEES-AITAYNLTDGSHLWHIKASAS--RIK 274 (327)
Q Consensus 200 ~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~s~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~--~v~ 274 (327)
++...++.|++||. +++.+..+..+ ...+..+++ +++|+++++...++ .|.+||. +++.+..+..+.. .+.
T Consensus 179 v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~--d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 254 (286)
T 1q7f_A 179 ISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGI--NSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCF 254 (286)
T ss_dssp EEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEE--CTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEE
T ss_pred EEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEE--CCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcce
Confidence 55567899999997 45566666433 356788998 48999888888776 9999995 5667777765543 477
Q ss_pred EEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482 275 GLASHR-NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 275 ~~~~~~-~~l~~~~~dg~v~iw~~~~~ 300 (327)
+++++| ..++.++.|+.|++|++...
T Consensus 255 ~i~~~~~g~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 255 DVALMDDGSVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred eEEECCCCcEEEECCCCeEEEEEcccc
Confidence 999999 33444467999999998665
No 175
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.86 E-value=1.3e-18 Score=141.76 Aligned_cols=258 Identities=10% Similarity=0.036 Sum_probs=185.8
Q ss_pred CCCeEEEEEccccccccccc------cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEE
Q psy7482 32 ADETVVLYDMVKRKQSGALM------QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHIS 105 (327)
Q Consensus 32 ~dg~v~~w~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~ 105 (327)
.++.|.++|..+++....+. ........+.+. +++..++...++.|.+||..+++.+..+ .. ... ...++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i-~~-~~~-p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI-TG-FTS-PRYIH 90 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE-EC-CSS-EEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc-CC-CCC-CcEEE
Confidence 48899999999988765442 122346777775 3555566666889999999999998888 32 234 88999
Q ss_pred EecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCceeeEec
Q psy7482 106 IHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQTLK 183 (327)
Q Consensus 106 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~ 183 (327)
++++++..++...++.|.+||..+++....+..............+++ .+++++++.. ++.|.++|..+++....+.
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 999885444443789999999999887766655441111112556777 4566666552 7899999999999888888
Q ss_pred CCCceeEEEeecCceEEEeC-CC----------CcEEEEEcCCCceeEEeeec-ccceEEEEEEecCCCcEEEEecCCCe
Q psy7482 184 SESKVHSVCFLNETTVCTGN-EE----------SAITAYNLTDGSHLWQIKAS-ASRIKGLVFFSIPQETTVCTGNEESA 251 (327)
Q Consensus 184 ~~~~i~~~~~~~~~~l~~~~-~d----------~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~s~~~~~l~~~~~d~~ 251 (327)
.......+.++|++.++.++ .+ +.|.++|..+++....+... ......+++ +|+++.|.++.. .
T Consensus 170 ~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~--~~d~~~lyv~~~--~ 245 (328)
T 3dsm_A 170 IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQL--NGTRDTLYWINN--D 245 (328)
T ss_dssp CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEE--CTTSCEEEEESS--S
T ss_pred cCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEE--ecCCCEEEEEcc--E
Confidence 66667889999985555444 33 78999999988877666543 235788999 488998888765 8
Q ss_pred EEEEEcCCCceeE--EeecccCceEEEeeeC---cEEEEE----ecCCcEEEEEcc
Q psy7482 252 ITAYNLTDGSHLW--HIKASASRIKGLASHR---NHLICI----TSAGDLVVWELN 298 (327)
Q Consensus 252 i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~---~~l~~~----~~dg~v~iw~~~ 298 (327)
|.+||..+++... .+.........++++| .++++. ..++.|.+||..
T Consensus 246 v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 246 IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 9999998877532 1222245688999998 555555 568899999998
No 176
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=1.7e-19 Score=162.76 Aligned_cols=234 Identities=15% Similarity=0.154 Sum_probs=165.4
Q ss_pred cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCC--c--eeeEEEecCCCEEEEEeCC---------CCE
Q psy7482 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT--A--VNHISIHPSGKLALSVGKD---------KTL 122 (327)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~--~--v~~~~~~~~~~~l~~~~~d---------g~i 122 (327)
....++|+|++++++++ |+.|++||+.+++....+ ..+... . ...+.|+|||++|+.++.+ +.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFL-ENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEE-CTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEE-echhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 35688999999988886 899999999999887666 555432 1 2347899999999998875 567
Q ss_pred EEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec--CCCce------------
Q psy7482 123 RTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK--SESKV------------ 188 (327)
Q Consensus 123 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~--~~~~i------------ 188 (327)
.+||+.+++....... ...+...+|||||+.|+.+.++.|++||+.+++..+... +...+
T Consensus 95 ~~~d~~~~~~~~l~~~------~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 95 DIYDLNKRQLITEERI------PNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp EEEETTTTEECCSSCC------CTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred EEEECCCCcEEEcccC------CCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence 7999999876442221 234899999999999999999999999998877543222 11112
Q ss_pred -----eEEEeecC-ceEEEeCCC------------------------------------CcEEEEEcCC---Cc--eeEE
Q psy7482 189 -----HSVCFLNE-TTVCTGNEE------------------------------------SAITAYNLTD---GS--HLWQ 221 (327)
Q Consensus 189 -----~~~~~~~~-~~l~~~~~d------------------------------------~~i~i~d~~~---~~--~~~~ 221 (327)
..+.|+|| ..|+.++.| ..|++||+.+ ++ ....
T Consensus 169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~ 248 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ 248 (740)
T ss_dssp TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence 35899999 667765321 1588899988 63 2233
Q ss_pred ee------ecccceEEEEEEecCCCcEEEEe----cCCCeEEEEEcCCCc----ee--EEe--ecccCceE-----EEee
Q psy7482 222 IK------ASASRIKGLVFFSIPQETTVCTG----NEESAITAYNLTDGS----HL--WHI--KASASRIK-----GLAS 278 (327)
Q Consensus 222 ~~------~~~~~v~~~~~~~s~~~~~l~~~----~~d~~i~i~d~~~~~----~~--~~~--~~~~~~v~-----~~~~ 278 (327)
+. +|...+..++|+ |||+.++.. +.+..|.+||+.+++ +. ..+ ..|...+. ...|
T Consensus 249 l~~~~~~~~~~~~~~~~~ws--pdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f 326 (740)
T 4a5s_A 249 ITAPASMLIGDHYLCDVTWA--TQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHF 326 (740)
T ss_dssp ECCCHHHHTSCEEEEEEEEE--ETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEE
T ss_pred ecCCccCCCCCeEEEEEEEe--CCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceE
Confidence 33 277789999995 899966654 234579999999887 22 222 44555544 7889
Q ss_pred eC--cEEE-EEe-cCC--cEEEEEccCc
Q psy7482 279 HR--NHLI-CIT-SAG--DLVVWELNED 300 (327)
Q Consensus 279 ~~--~~l~-~~~-~dg--~v~iw~~~~~ 300 (327)
+| +.|+ ..+ .+| .|++|++..+
T Consensus 327 spDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 327 TLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred cCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 99 5555 554 444 4777887765
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.86 E-value=3.8e-20 Score=154.87 Aligned_cols=269 Identities=6% Similarity=0.003 Sum_probs=175.5
Q ss_pred EEEEEe--CCCEEEEecC---CCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482 17 VRSVAA--TSKLAASSGA---DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (327)
Q Consensus 17 v~~~~~--~~~~l~~~~~---dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 91 (327)
+..++| +|++|+.... +..|.+||+.+++.......+......+.|+|||+.|+.++.++.|++||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 555666 8998876643 24788899988776544433333233478999999999999998999999998876555
Q ss_pred EEecccCCceee-------------------EEEecCCCEEEEE-----eCCCCEEEEEcCCCceeeeeeccccCccccc
Q psy7482 92 FKKAHKGTAVNH-------------------ISIHPSGKLALSV-----GKDKTLRTWNLVKGRSAYITNLSSYGVGFEN 147 (327)
Q Consensus 92 ~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 147 (327)
. ..+... ... ..|+|+++.++.. ..+..|.+||+.+++........ ..
T Consensus 118 ~-~~~~~~-~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~------~~ 189 (396)
T 3c5m_A 118 Y-TVDEEW-KGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT------AW 189 (396)
T ss_dssp E-ECCTTE-EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEES------SC
T ss_pred E-eccccc-CCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCC------cc
Confidence 4 323221 111 3456777766544 35568999999888765544322 23
Q ss_pred eEEEEEcc-CCcEEEeec-C------CeEEEEEecCCceeeEecC--CCceeEEEeecC-ceEEEeCCC-----CcEEEE
Q psy7482 148 LDSVVWSP-EGLLYAIPI-Q------NKAVVFSVEKAGVLQTLKS--ESKVHSVCFLNE-TTVCTGNEE-----SAITAY 211 (327)
Q Consensus 148 v~~~~~~~-~~~~l~~~~-~------~~i~i~d~~~~~~~~~~~~--~~~i~~~~~~~~-~~l~~~~~d-----~~i~i~ 211 (327)
+..+.|+| +++.++... + ..|.+||+..++......+ ...+..+.|+|+ ..|+.++.+ +.|++|
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 269 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA 269 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE
Confidence 88999999 787666543 2 4688888876553333332 235788999999 556655432 449999
Q ss_pred EcCCCceeEEeeecccceEEEEEEecC-CCcEEEEec----------------CCCeEEEEEcCCCceeEEeecccC---
Q psy7482 212 NLTDGSHLWQIKASASRIKGLVFFSIP-QETTVCTGN----------------EESAITAYNLTDGSHLWHIKASAS--- 271 (327)
Q Consensus 212 d~~~~~~~~~~~~~~~~v~~~~~~~s~-~~~~l~~~~----------------~d~~i~i~d~~~~~~~~~~~~~~~--- 271 (327)
|+.+++...... ... .. +.|+ | +|++++.++ .+..|++||+.+++.. .+..+..
T Consensus 270 d~~~g~~~~l~~-~~~-~~-~~~s--~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~ 343 (396)
T 3c5m_A 270 NPETLENEEVMV-MPP-CS-HLMS--NFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWD 343 (396)
T ss_dssp CTTTCCEEEEEE-CCS-EE-EEEE--CSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCC
T ss_pred ECCCCCeEEeee-CCC-CC-CCcc--CCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccc
Confidence 998876543222 112 22 6775 7 999888754 3478999999887643 3444443
Q ss_pred --------ceEEEeeeC--cEEEEEe-cCCcEEEEEccC
Q psy7482 272 --------RIKGLASHR--NHLICIT-SAGDLVVWELNE 299 (327)
Q Consensus 272 --------~v~~~~~~~--~~l~~~~-~dg~v~iw~~~~ 299 (327)
.+..++|+| +.|+.++ .++...+|.++.
T Consensus 344 ~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 344 VLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp CBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred cccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEE
Confidence 256678998 5665555 466666666553
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.85 E-value=1.1e-18 Score=144.00 Aligned_cols=257 Identities=12% Similarity=0.045 Sum_probs=179.7
Q ss_pred cCCccEEEEEe--CCCEEEEec----------CCCeEEEEEccccccccccccc------cccEEEEEECCCCCeEEEec
Q psy7482 12 SHTASVRSVAA--TSKLAASSG----------ADETVVLYDMVKRKQSGALMQH------EGTITCLKFTPEGSHLISCS 73 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~ 73 (327)
.+..+ .+++ ++++++++. .++.|.+||..+++.+..+... ......++++|+|++|+++.
T Consensus 49 ~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n 126 (361)
T 2oiz_A 49 TAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN 126 (361)
T ss_dssp CCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEE
T ss_pred CCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEEC
Confidence 34444 6777 899998876 3678999999988887776532 23466799999999999886
Q ss_pred C--CCcEEEEEcCCCeEEEe-EEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCC-Cceeeeeec-cccCccccc
Q psy7482 74 D--DGSIAIFRVGSWQLEKL-FKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVK-GRSAYITNL-SSYGVGFEN 147 (327)
Q Consensus 74 ~--d~~i~iw~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~~~~~-~~~~~~~~~ 147 (327)
. ++.|.+||+.+++.+.. + .. .. ...+.+.|++ ..+++.+.||.+.+|+... ++....... ........
T Consensus 127 ~~~~~~v~v~d~~~~~~~~~~i-~~--~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~- 201 (361)
T 2oiz_A 127 ASPATSIGIVDVAKGDYVEDVT-AA--AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDD- 201 (361)
T ss_dssp ESSSEEEEEEETTTTEEEEEEG-GG--TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTS-
T ss_pred CCCCCeEEEEECCCCcEEEEEe-cC--CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCC-
Confidence 4 57899999999988776 4 21 22 3335667765 6778888999999999865 443311110 00000011
Q ss_pred eEEEEEccCCcEEEeec-CCeEEEEEecCCce--eeEecC-----------CCceeEEEeecC-ceEEEeCC--------
Q psy7482 148 LDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV--LQTLKS-----------ESKVHSVCFLNE-TTVCTGNE-------- 204 (327)
Q Consensus 148 v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~--~~~~~~-----------~~~i~~~~~~~~-~~l~~~~~-------- 204 (327)
...+.++|++..++..+ ++.+.++|+..... ...+.. ......++++|+ +.++++..
T Consensus 202 ~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~ 281 (361)
T 2oiz_A 202 PIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTH 281 (361)
T ss_dssp CBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCT
T ss_pred ceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccc
Confidence 12333456665555444 88999999875532 222210 111223789998 66655432
Q ss_pred ---CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC--ceeEEeecccCceEEEeee
Q psy7482 205 ---ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG--SHLWHIKASASRIKGLASH 279 (327)
Q Consensus 205 ---d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~ 279 (327)
.+.|.+||+.+++.+.++..+. ...++|+ |+|++|++++. +.|.+||..++ +.+.++..+......++++
T Consensus 282 ~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~s--pdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~ 356 (361)
T 2oiz_A 282 KFPAAEIWVMDTKTKQRVARIPGRD--ALSMTID--QQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFH 356 (361)
T ss_dssp TCCCSEEEEEETTTTEEEEEEECTT--CCEEEEE--TTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEEC
T ss_pred cCCCceEEEEECCCCcEEEEEecCC--eeEEEEC--CCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEec
Confidence 3589999999999999998877 8999995 99999999887 99999999999 8888886666677888887
Q ss_pred C
Q psy7482 280 R 280 (327)
Q Consensus 280 ~ 280 (327)
|
T Consensus 357 p 357 (361)
T 2oiz_A 357 P 357 (361)
T ss_dssp C
T ss_pred C
Confidence 7
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.85 E-value=8.5e-17 Score=139.32 Aligned_cols=298 Identities=10% Similarity=0.070 Sum_probs=210.8
Q ss_pred CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC--CCeEEEeEEecccCCc
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG--SWQLEKLFKKAHKGTA 100 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~~~ 100 (327)
.+.++++...++.|.++|..+++.+..+... ..+..+.|+|||+++++++.|+.|.+||+. +++.+..+..+. .
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~--~- 241 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS--E- 241 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS--E-
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC--C-
Confidence 4456777888999999999999988887643 356789999999999999999999999995 778777773322 2
Q ss_pred eeeEEEe----cCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccCc-----c-ccceEEEEEccCCcEEEeec--CCe
Q psy7482 101 VNHISIH----PSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYGV-----G-FENLDSVVWSPEGLLYAIPI--QNK 167 (327)
Q Consensus 101 v~~~~~~----~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~-----~-~~~v~~~~~~~~~~~l~~~~--~~~ 167 (327)
...++|+ |||+++++++. ++.+.++|..+.+.+..+....... + ...+..+..++++..+++.. .|.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 7899999 69998888765 5899999999988887766543210 1 11477888999877665553 799
Q ss_pred EEEEEecCCcee--eEecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCCCceeEEeee-cccc--eEEEEEEecCC-
Q psy7482 168 AVVFSVEKAGVL--QTLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTDGSHLWQIKA-SASR--IKGLVFFSIPQ- 239 (327)
Q Consensus 168 i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~~~~~~~~~~-~~~~--v~~~~~~~s~~- 239 (327)
|.++|....+.. ..+........+.|+|+ .+++ +...++.|.++|+.+++.+..+.. ...+ -....|. .|+
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~-~p~~ 400 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFV-HPTF 400 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEE-ETTT
T ss_pred EEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeE-CCCC
Confidence 999998776433 33445566788999998 5554 455788999999999988776654 2111 1233343 277
Q ss_pred CcEEEEec-CCCeEEEEEcCC-------CceeEEeecccCceEEEeeeC--cEEEEEec-------CCcEEEEEccCccC
Q psy7482 240 ETTVCTGN-EESAITAYNLTD-------GSHLWHIKASASRIKGLASHR--NHLICITS-------AGDLVVWELNEDVT 302 (327)
Q Consensus 240 ~~~l~~~~-~d~~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~-------dg~v~iw~~~~~~~ 302 (327)
+...+++. .++.|.++|..+ .+.+.++......-..+..+| +++.+... .+.|.++|+.+...
T Consensus 401 g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 480 (567)
T 1qks_A 401 GPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTG 480 (567)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCC
T ss_pred CcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccc
Confidence 44445553 468999999987 567777776543435577888 66666552 46899999987611
Q ss_pred ---CCc-eeeee------cCCCCceEEEEeCCC
Q psy7482 303 ---REP-QRVSA------TNDGCRFTCLAIRPP 325 (327)
Q Consensus 303 ---~~~-~~~~~------~~~~~~i~~l~~~p~ 325 (327)
... ..+.. ...+.++..++|+|+
T Consensus 481 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (567)
T 1qks_A 481 DGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKD 513 (567)
T ss_dssp SSSCCCEEEECHHHHHTCCSSCCEEEEEEECTT
T ss_pred cccCCCcEEeccccccccCCCCcceEeeeECCC
Confidence 111 22221 123567888999886
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=2.5e-19 Score=149.97 Aligned_cols=250 Identities=12% Similarity=0.036 Sum_probs=168.5
Q ss_pred EEEcccccccccccccccc-----EEEEEECCCCCeEEEecCC---CcEEEEEcCCCeEEEeEEecccCCceeeEEEecC
Q psy7482 38 LYDMVKRKQSGALMQHEGT-----ITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS 109 (327)
Q Consensus 38 ~w~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 109 (327)
..|..+++.+..+..+... +..++|+|||++|+..... ..|.+||+.+++..... ... ......+.|+|+
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~-~~~-~~~~~~~~~spd 91 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT-EGK-GDNTFGGFISTD 91 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC-CSS-CBCTTTCEECTT
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee-cCC-CCccccceECCC
Confidence 4466677666666544333 6778999999998776443 47888999888765443 222 221334789999
Q ss_pred CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEE-------------------EEEccCCcEEEee------c
Q psy7482 110 GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDS-------------------VVWSPEGLLYAIP------I 164 (327)
Q Consensus 110 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~------~ 164 (327)
++.|+.++.++.|.+||+.+++.......+.. .... ..|+|+++.++.. .
T Consensus 92 g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~-----~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 92 ERAFFYVKNELNLMKVDLETLEEQVIYTVDEE-----WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred CCEEEEEEcCCcEEEEECCCCCcEEEEecccc-----cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 99999999989999999988876555443321 0111 3567888766553 2
Q ss_pred CCeEEEEEecCCceeeEecCCCceeEEEeec-C-ceEEEeCCC------CcEEEEEcCCCceeEEeeec--ccceEEEEE
Q psy7482 165 QNKAVVFSVEKAGVLQTLKSESKVHSVCFLN-E-TTVCTGNEE------SAITAYNLTDGSHLWQIKAS--ASRIKGLVF 234 (327)
Q Consensus 165 ~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~ 234 (327)
+..|++||+.+++......+...+..+.|+| + +.++..+.+ ..|.+||+..++.. .+..+ ...+..++|
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~ 245 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFW 245 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEE
T ss_pred cceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEE
Confidence 5689999999888766666777899999999 5 545554433 46889998765433 33223 235777888
Q ss_pred EecCCCcEEEEecCC-----CeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEe----------------cCC
Q psy7482 235 FSIPQETTVCTGNEE-----SAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICIT----------------SAG 290 (327)
Q Consensus 235 ~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~----------------~dg 290 (327)
+|+|++|+.++.+ +.|++||+.+++........ ... +.|+| +++++++ .++
T Consensus 246 --spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 246 --IPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp --CTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred --CCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 4999987776543 45999999888654332211 122 77876 6666544 246
Q ss_pred cEEEEEccCc
Q psy7482 291 DLVVWELNED 300 (327)
Q Consensus 291 ~v~iw~~~~~ 300 (327)
.|++||+..+
T Consensus 321 ~i~~~d~~~~ 330 (396)
T 3c5m_A 321 FLYVLNTKAK 330 (396)
T ss_dssp EEEEEETTTT
T ss_pred cEEEEecccC
Confidence 7999999877
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.84 E-value=1e-17 Score=136.47 Aligned_cols=249 Identities=10% Similarity=0.059 Sum_probs=181.7
Q ss_pred ccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482 15 ASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (327)
Q Consensus 15 ~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 93 (327)
.....+++ ++++.++...++.|.+||..+++.+.++. .......++++++++..++...++.|.+||..+++....+.
T Consensus 44 ~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp SCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred ccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 44677888 55566666678999999999999888775 34568899998888554554478999999999999887774
Q ss_pred eccc----CCceeeEEEecCCCEEEEEe--CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C-
Q psy7482 94 KAHK----GTAVNHISIHPSGKLALSVG--KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q- 165 (327)
Q Consensus 94 ~~~~----~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~- 165 (327)
.+.. .. ...+++ . +..++.+. .++.|.++|+.+++....+..... ...+.++|+|++++++. +
T Consensus 123 ~g~~~~~~~~-p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~------p~~i~~~~dG~l~v~~~~~~ 193 (328)
T 3dsm_A 123 CPDMDMESGS-TEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ------PTSLVMDKYNKMWTITDGGY 193 (328)
T ss_dssp CTTCCTTTCB-CCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC------BCCCEECTTSEEEEEBCCBC
T ss_pred cCCccccCCC-cceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC------ccceEEcCCCCEEEEECCCc
Confidence 3331 13 567777 3 44555554 488999999999887776655433 67889999999877775 4
Q ss_pred ---------CeEEEEEecCCceeeEecC--CCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEE--eeecccceEE
Q psy7482 166 ---------NKAVVFSVEKAGVLQTLKS--ESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQ--IKASASRIKG 231 (327)
Q Consensus 166 ---------~~i~i~d~~~~~~~~~~~~--~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~v~~ 231 (327)
+.|.++|..+++....+.. ...+..++++|+ +.++++.. .|.+||..+++.... +.........
T Consensus 194 ~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~g 271 (328)
T 3dsm_A 194 EGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYG 271 (328)
T ss_dssp TTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEE
T ss_pred cCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEE
Confidence 6899999999988877763 347899999997 66666654 899999988775321 2222356788
Q ss_pred EEEEecC-CCcEEEEe----cCCCeEEEEEcCCCceeEEeecccCceEEEeee
Q psy7482 232 LVFFSIP-QETTVCTG----NEESAITAYNLTDGSHLWHIKASASRIKGLASH 279 (327)
Q Consensus 232 ~~~~~s~-~~~~l~~~----~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 279 (327)
+++. | ++.++++. ..++.|.+||.. ++.+.++.... ....++|-
T Consensus 272 i~vd--p~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~-~P~~~~~~ 320 (328)
T 3dsm_A 272 LTVN--PNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGI-IPGAFCWK 320 (328)
T ss_dssp EEEC--TTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEE-SEEEEEEE
T ss_pred EEEc--CCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEecc-CcceEEEe
Confidence 8884 7 55666665 578999999987 88888876433 33555553
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.84 E-value=9.2e-18 Score=134.86 Aligned_cols=240 Identities=13% Similarity=0.110 Sum_probs=170.7
Q ss_pred cccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482 48 GALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (327)
Q Consensus 48 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 126 (327)
..+..+.....+++|+|+++ +++++..++.|..|+..++ ...+ ..+... +.+++++++++++++...++.|.+||
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~-~~~~~~-~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE-MHPSHH-QNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE-ESSCSS-EEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE-ECCCCC-cceeeECCCCcEEEEecCCCeEEEEc
Confidence 34444556678999999998 7788888999999999877 4555 445555 89999999999877776678999999
Q ss_pred cCCCceeeeeeccccCccccceEEEEEccCCcEEEe----ec--------------CCeEEEEEecCCceeeEecCCCce
Q psy7482 127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI----PI--------------QNKAVVFSVEKAGVLQTLKSESKV 188 (327)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~--------------~~~i~i~d~~~~~~~~~~~~~~~i 188 (327)
..+++......... ......+..++++|+|+++++ +. .+.|..++.. ++...........
T Consensus 97 ~~~g~~~~~~~~~~-~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~ 174 (296)
T 3e5z_A 97 EPGGEWESIADSFE-GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP 174 (296)
T ss_dssp STTCCEEEEECEET-TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE
T ss_pred CCCCcEEEEeeccC-CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC
Confidence 98877543322111 111223678999999998886 32 2466666655 5444444466678
Q ss_pred eEEEeecC-ceEEEeCCCCcEEEEEcC-CCce---eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCcee
Q psy7482 189 HSVCFLNE-TTVCTGNEESAITAYNLT-DGSH---LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHL 263 (327)
Q Consensus 189 ~~~~~~~~-~~l~~~~~d~~i~i~d~~-~~~~---~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~ 263 (327)
..++|+|+ +.+++.+.++.|.+|++. +++. ...+..+...+..+++ +++|+++++. ++.|.+||.. ++.+
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~--d~~G~l~v~~--~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRV--DAGGLIWASA--GDGVHVLTPD-GDEL 249 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEE--BTTSCEEEEE--TTEEEEECTT-SCEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEE--CCCCCEEEEc--CCeEEEECCC-CCEE
Confidence 89999999 566777788999999997 4443 2233334455678888 4899877666 7899999975 7788
Q ss_pred EEeecccCceEEEeee-C--cEEEEEecCCcEEEEEccCc
Q psy7482 264 WHIKASASRIKGLASH-R--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 264 ~~~~~~~~~v~~~~~~-~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
..+..+.. +.+++|. | +.|++++.++ +.-++..+.
T Consensus 250 ~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 250 GRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp EEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred EEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence 88887777 8999995 5 5777777653 333344443
No 183
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=2.3e-18 Score=153.81 Aligned_cols=246 Identities=11% Similarity=0.054 Sum_probs=168.9
Q ss_pred cccccccccEEEEEECCCCCeEEEe--cCCCcEEEEEcCCCeEEEeEEecccCCcee---------eEEEe--cCCCE-E
Q psy7482 48 GALMQHEGTITCLKFTPEGSHLISC--SDDGSIAIFRVGSWQLEKLFKKAHKGTAVN---------HISIH--PSGKL-A 113 (327)
Q Consensus 48 ~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l 113 (327)
..+.+|...+..++|+++.-+++.. +.++...||....+.....+ ..+... +. ...|+ |||+. |
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l-~~~~~~-~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESA-LPAPWN-VRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEES-SCTTCC-BCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCccee-CCCCcc-ccccccccCCccceeeeecCCCeEE
Confidence 3456788999999999887666766 66888999996544444455 444433 55 56666 99988 7
Q ss_pred EEEeC-CCCEEEEEcC--C-CceeeeeeccccCccccceEEEEEccCCcEEEeec-C----------CeEEEEEecC---
Q psy7482 114 LSVGK-DKTLRTWNLV--K-GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q----------NKAVVFSVEK--- 175 (327)
Q Consensus 114 ~~~~~-dg~i~iwd~~--~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~----------~~i~i~d~~~--- 175 (327)
+.++. +..|.++++. . ++....... ....+...+..++|+|||+.|+.++ + ..|++||+.+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~~~~l~~~-~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAVPRPLTPV-SAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCCCEECSCC-CCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEECCCCeEEEEcCCCCCCCCCEeccCC-ccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 76654 5667777765 2 433222211 1001233488999999999888776 4 5899999988
Q ss_pred ---CceeeEe-cCCCceeEEEeecC-ceEEEeCCC--------CcEEEEEcC-CC---ceeEEeeecccceEEEEEEecC
Q psy7482 176 ---AGVLQTL-KSESKVHSVCFLNE-TTVCTGNEE--------SAITAYNLT-DG---SHLWQIKASASRIKGLVFFSIP 238 (327)
Q Consensus 176 ---~~~~~~~-~~~~~i~~~~~~~~-~~l~~~~~d--------~~i~i~d~~-~~---~~~~~~~~~~~~v~~~~~~~s~ 238 (327)
++..... .+...+..++|+|| ++|+.++.+ ..|++||+. ++ +.......+...+..+.| +|
T Consensus 174 ~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~--sp 251 (662)
T 3azo_A 174 ADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEW--AP 251 (662)
T ss_dssp TCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEE--CT
T ss_pred ccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEE--CC
Confidence 6554444 45567888999999 667766543 479999998 56 333334455678999999 49
Q ss_pred CCcEEEEecCCC--eEEEEEcCCCceeEEeecccCc--------eEEEeeeC--cEEEEEecCCcEEEEEccC
Q psy7482 239 QETTVCTGNEES--AITAYNLTDGSHLWHIKASASR--------IKGLASHR--NHLICITSAGDLVVWELNE 299 (327)
Q Consensus 239 ~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~--------v~~~~~~~--~~l~~~~~dg~v~iw~~~~ 299 (327)
+|+++++++.++ .|.+||+.+++.......+... +..++|++ .++++++. +.+++|.++.
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~ 323 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDP 323 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEET
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEEC
Confidence 999888888888 6777777666654444333322 56788887 78888888 9999995543
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.83 E-value=9.7e-16 Score=123.03 Aligned_cols=280 Identities=10% Similarity=0.055 Sum_probs=192.5
Q ss_pred EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccccccc-ccccccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482 6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (327)
Q Consensus 6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 82 (327)
+.+.+..+...+.++++ ++++.++...++.|.+||.. ++... ....+...+.++++.+++.++++...++.|..|+
T Consensus 6 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 6 QELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRIT 84 (299)
T ss_dssp EEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEEC
Confidence 34555567788999999 67777776668899999987 54332 1223456789999999998888777788899999
Q ss_pred cCCCeEEEeEEec-ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482 83 VGSWQLEKLFKKA-HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA 161 (327)
Q Consensus 83 ~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 161 (327)
.. ++. ..+... .... +..+++.+++.++++...++.|..||. +++.... ..... ...+..+++++++.+++
T Consensus 85 ~~-g~~-~~~~~~~~~~~-~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~-~~~~~---~~~~~~i~~~~~g~l~v 156 (299)
T 2z2n_A 85 KK-GII-KEYTLPNPDSA-PYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREY-ELPNK---GSYPSFITLGSDNALWF 156 (299)
T ss_dssp TT-SCE-EEEECSSTTCC-EEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSST---TCCEEEEEECTTSCEEE
T ss_pred CC-CcE-EEEeCCCcCCC-ceeeEECCCCCEEEEecCCceEEEECC-CCCEEEe-cCCCC---CCCCceEEEcCCCCEEE
Confidence 76 443 233122 2334 899999999988777777889999998 5544322 22211 23488999999998888
Q ss_pred eec-CCeEEEEEecCCceeeE-ec-CCCceeEEEeecCc-eEEEeCCCCcEEEEEcCCCceeEE-eeecccceEEEEEEe
Q psy7482 162 IPI-QNKAVVFSVEKAGVLQT-LK-SESKVHSVCFLNET-TVCTGNEESAITAYNLTDGSHLWQ-IKASASRIKGLVFFS 236 (327)
Q Consensus 162 ~~~-~~~i~i~d~~~~~~~~~-~~-~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~ 236 (327)
+.. ++.|..||. +++.... .. ....+..+++++++ ++++...++.|..||. +++.... ...+...+.++++
T Consensus 157 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-- 232 (299)
T 2z2n_A 157 TENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITA-- 232 (299)
T ss_dssp EETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE--
T ss_pred EeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEE--
Confidence 776 789999998 6655432 22 34568899999984 4455556789999998 6654321 2234456888888
Q ss_pred cCCCcEEEEecCCCeEEEEEcCCCceeE-EeecccCceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482 237 IPQETTVCTGNEESAITAYNLTDGSHLW-HIKASASRIKGLASHR-NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 237 s~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~ 300 (327)
+++|+++++...++.|..||. +++... .+..+...+.++++ + ..|..+...+.+..++....
T Consensus 233 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 233 GAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp CSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred CCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence 488887777767899999998 454222 23344567889999 7 55555544677777777654
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.83 E-value=3.1e-17 Score=131.75 Aligned_cols=236 Identities=10% Similarity=0.037 Sum_probs=169.1
Q ss_pred cCCccEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482 12 SHTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~ 88 (327)
.+.....+++| +++ +++++..++.|..||..++ ...+..+...+.+++++|+|+++++...++.|.+||..+++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence 35566778888 677 7888888999999999876 555666777899999999999888777778999999988776
Q ss_pred EEeEEecc---cCCceeeEEEecCCCEEEEE----e-------------CCCCEEEEEcCCCceeeeeeccccCccccce
Q psy7482 89 EKLFKKAH---KGTAVNHISIHPSGKLALSV----G-------------KDKTLRTWNLVKGRSAYITNLSSYGVGFENL 148 (327)
Q Consensus 89 ~~~~~~~~---~~~~v~~~~~~~~~~~l~~~----~-------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v 148 (327)
.... ... ....+..++++|+|+++++. + ..+.|..++.. ++....... ....
T Consensus 103 ~~~~-~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~------~~~~ 174 (296)
T 3e5z_A 103 ESIA-DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD------RVKP 174 (296)
T ss_dssp EEEE-CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC------CSSE
T ss_pred EEEe-eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC------CCCC
Confidence 5443 211 11126789999999988873 2 12455556554 433222111 1237
Q ss_pred EEEEEccCCcEEEeec-CCeEEEEEec-CCce---eeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482 149 DSVVWSPEGLLYAIPI-QNKAVVFSVE-KAGV---LQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQI 222 (327)
Q Consensus 149 ~~~~~~~~~~~l~~~~-~~~i~i~d~~-~~~~---~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 222 (327)
..++|+|+++.+++.. ++.|.+||+. +++. ...+. ....+..+++++++.++++. ++.|.+||.. ++.+..+
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEE
Confidence 8999999999885555 7899999997 4444 22332 34556789999996666666 8899999986 7778888
Q ss_pred eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482 223 KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH 262 (327)
Q Consensus 223 ~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~ 262 (327)
..+.. +.+++|. +++++.|++++.+ .+.-++..+.+.
T Consensus 253 ~~~~~-~~~~~f~-~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 253 LTPQT-TSNLCFG-GPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp ECSSC-CCEEEEE-STTSCEEEEEETT-EEEEEECSCCBC
T ss_pred ECCCC-ceeEEEE-CCCCCEEEEEcCC-eEEEEEcccccc
Confidence 77777 8899996 3888888888765 455556655543
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.82 E-value=1.2e-16 Score=143.76 Aligned_cols=272 Identities=11% Similarity=0.037 Sum_probs=181.0
Q ss_pred eCCCEEEEecCC-----CeEEEEEccccccccc------cccccccEEEEEECCCCCeEEEecCCC-----cEEEEEcCC
Q psy7482 22 ATSKLAASSGAD-----ETVVLYDMVKRKQSGA------LMQHEGTITCLKFTPEGSHLISCSDDG-----SIAIFRVGS 85 (327)
Q Consensus 22 ~~~~~l~~~~~d-----g~v~~w~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iw~~~~ 85 (327)
.+|++++-...+ +.+.+.+...++.... -.+|...+..++|||||++|+.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 577776644322 2344444444433211 123445688999999999998765543 899999999
Q ss_pred CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC----------------EEEEEcCCCceeeeeeccccCccccceE
Q psy7482 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT----------------LRTWNLVKGRSAYITNLSSYGVGFENLD 149 (327)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----------------i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 149 (327)
++..... ..+ .. +..++|+|||+.|+.++.++. |++|++.+++.......... .+...+.
T Consensus 161 g~~~~~~-~~~-~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~-~~~~~~~ 236 (710)
T 2xdw_A 161 AKELPDV-LER-VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP-DEPKWMG 236 (710)
T ss_dssp TEEEEEE-EEE-EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT-TCTTCEE
T ss_pred CCCCccc-ccC-cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC-CCCeEEE
Confidence 9877643 222 22 678999999999999888766 99999988764322211111 1122367
Q ss_pred EEEEccCCcEEEeec------CCeEEEEEecC------Cc-eeeEec-CCCceeEEEeecC-ceEEEeCC----CCcEEE
Q psy7482 150 SVVWSPEGLLYAIPI------QNKAVVFSVEK------AG-VLQTLK-SESKVHSVCFLNE-TTVCTGNE----ESAITA 210 (327)
Q Consensus 150 ~~~~~~~~~~l~~~~------~~~i~i~d~~~------~~-~~~~~~-~~~~i~~~~~~~~-~~l~~~~~----d~~i~i 210 (327)
.+.|+|+|++|+... +..+++||+.+ +. ....+. +...+.. .|+|+ +.++..+. .+.|.+
T Consensus 237 ~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~ 315 (710)
T 2xdw_A 237 GAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLIN 315 (710)
T ss_dssp EEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEE
T ss_pred EEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEE
Confidence 899999999887664 45899999986 43 344444 4444444 47776 55554433 346999
Q ss_pred EEcCCCce--eEEeeeccc--ceEEEEEEecCCCcEEEEecCCCe--EEEEEcCCCceeEEeecccCceEEEeeeC--cE
Q psy7482 211 YNLTDGSH--LWQIKASAS--RIKGLVFFSIPQETTVCTGNEESA--ITAYNLTDGSHLWHIKASASRIKGLASHR--NH 282 (327)
Q Consensus 211 ~d~~~~~~--~~~~~~~~~--~v~~~~~~~s~~~~~l~~~~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~ 282 (327)
||+.++.. ...+..|.. .+..+.+. +++.++++...|+. |.+|++.+++.+..+..+.+.+..+.++| ..
T Consensus 316 ~d~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~ 393 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVPEHEKDVLEWVACV--RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTE 393 (710)
T ss_dssp EETTSCCGGGCEEEECCCSSCEEEEEEEE--TTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSE
T ss_pred EeCCCCCcccceeccCCCCCCeEEEEEEE--cCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCE
Confidence 99987642 344444433 67788884 67888888888875 66678777887788888888889999988 34
Q ss_pred EE-EEec---CCcEEEEEccCc
Q psy7482 283 LI-CITS---AGDLVVWELNED 300 (327)
Q Consensus 283 l~-~~~~---dg~v~iw~~~~~ 300 (327)
++ +.+. .+.|+.||+.++
T Consensus 394 l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 394 IFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp EEEEEECSSCCCEEEEEETTSS
T ss_pred EEEEEeCCCCCCEEEEEECCCC
Confidence 44 3333 467999999776
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=2.8e-16 Score=128.34 Aligned_cols=231 Identities=10% Similarity=0.132 Sum_probs=159.1
Q ss_pred eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC----CcEEEEEc
Q psy7482 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD----GSIAIFRV 83 (327)
Q Consensus 10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~ 83 (327)
+.++...+.+++| ++++++++..++.|.+||..+++.......+...+.+++++|+++++++...+ +.|.+||.
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence 3456677889999 78877888889999999998877655443466789999999999888877666 68999999
Q ss_pred CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482 84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG 157 (327)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (327)
.+++....+........+..+.++|+++++++... .+.|..+|..+++....... ...+..++|+|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~i~~~~dg 193 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN------ISVANGIALSTDE 193 (333)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE------ESSEEEEEECTTS
T ss_pred CCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC------CCcccceEECCCC
Confidence 87765534311112223899999999987776553 24566666655444322211 1227889999999
Q ss_pred cEEEee-c-CCeEEEEEecC-CceeeEe--------cCCCceeEEEeecCceE-EEeCCCCcEEEEEcCCCceeEEeeec
Q psy7482 158 LLYAIP-I-QNKAVVFSVEK-AGVLQTL--------KSESKVHSVCFLNETTV-CTGNEESAITAYNLTDGSHLWQIKAS 225 (327)
Q Consensus 158 ~~l~~~-~-~~~i~i~d~~~-~~~~~~~--------~~~~~i~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~ 225 (327)
+.+.++ . ++.|.+||..+ ++....+ .....+..+++++++.+ ++...++.|.+||. +++.+..+..+
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~ 272 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIP 272 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECT
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcC
Confidence 855444 3 78999999964 3322211 11246788999998544 44556789999998 56666666544
Q ss_pred cc------ceEEEEEEecCCCcEEEEecCC
Q psy7482 226 AS------RIKGLVFFSIPQETTVCTGNEE 249 (327)
Q Consensus 226 ~~------~v~~~~~~~s~~~~~l~~~~~d 249 (327)
.. .+.+++|. ++++.|+.++.+
T Consensus 273 ~~~~g~~~~~~~~~~~--~dg~~L~v~~~~ 300 (333)
T 2dg1_A 273 GRDEGHMLRSTHPQFI--PGTNQLIICSND 300 (333)
T ss_dssp TGGGTCSCBCCEEEEC--TTSCEEEEEEEC
T ss_pred CCccccccCcceEEEC--CCCCEEEEEeCc
Confidence 33 58889994 888777655544
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.81 E-value=1.9e-17 Score=148.40 Aligned_cols=272 Identities=8% Similarity=0.006 Sum_probs=177.4
Q ss_pred EeCCCEEEEecCCC---eEEEE--Ecccccccccc------ccccccEEEEEECCCCCeEE-----EecCCCcEEEEEcC
Q psy7482 21 AATSKLAASSGADE---TVVLY--DMVKRKQSGAL------MQHEGTITCLKFTPEGSHLI-----SCSDDGSIAIFRVG 84 (327)
Q Consensus 21 ~~~~~~l~~~~~dg---~v~~w--~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~-----~~~~d~~i~iw~~~ 84 (327)
..+|++++....++ .-.+| +...++....+ .+|...+..++|||||++|| .|+.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 35788777655433 33444 44344332222 23555799999999999998 45556789999999
Q ss_pred CCeEEEeEEecccCC-ceeeEEEecCCCEEEEEeCCCC-------------EEEEEcCCCceeeeeeccccCccccceEE
Q psy7482 85 SWQLEKLFKKAHKGT-AVNHISIHPSGKLALSVGKDKT-------------LRTWNLVKGRSAYITNLSSYGVGFENLDS 150 (327)
Q Consensus 85 ~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 150 (327)
+++.... .+... ....++|+|||+.|+.++.|.. |++|++.++.......... ..+...+..
T Consensus 156 tg~~~~~---~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~-~~~~~~~~~ 231 (695)
T 2bkl_A 156 SGEWSKV---DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER-TGDPTTFLQ 231 (695)
T ss_dssp TCCBCSS---CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC-CCCTTCEEE
T ss_pred CCCCcCC---cccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec-CCCCEEEEE
Confidence 9886411 11111 1267899999999999988776 9999998876322211111 111234789
Q ss_pred EEEccCCcEEEeec-CC----eEEEEEecCCceeeEecCCCceeEEEeecCceEEEeC----CCCcEEEEEcCCCce--e
Q psy7482 151 VVWSPEGLLYAIPI-QN----KAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGN----EESAITAYNLTDGSH--L 219 (327)
Q Consensus 151 ~~~~~~~~~l~~~~-~~----~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~--~ 219 (327)
+.|+|+|++++.+. ++ .|++++..+++......+...+....+.+++ ++..+ .++.|.+||+.+++. .
T Consensus 232 ~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~ 310 (695)
T 2bkl_A 232 SDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASW 310 (695)
T ss_dssp EEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGC
T ss_pred EEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCC
Confidence 99999999887765 44 6777766555544444455555666664446 54443 357899999987653 2
Q ss_pred EEeeec--ccceEEEEEEecCCCcEEEEecCCCeEEEEEcC-CCceeEEeecc-cCceEEEeeeC--cEEE-EEe---cC
Q psy7482 220 WQIKAS--ASRIKGLVFFSIPQETTVCTGNEESAITAYNLT-DGSHLWHIKAS-ASRIKGLASHR--NHLI-CIT---SA 289 (327)
Q Consensus 220 ~~~~~~--~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~-~~~v~~~~~~~--~~l~-~~~---~d 289 (327)
..+..+ ...+..+++ .++.++++...|+..++|.+. +++.+..+..+ .+.+..++++| +.++ +.+ ..
T Consensus 311 ~~l~~~~~~~~l~~~~~---~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P 387 (695)
T 2bkl_A 311 KEIVPEDSSASLLSVSI---VGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTP 387 (695)
T ss_dssp EEEECCCSSCEEEEEEE---ETTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEE
T ss_pred eEEecCCCCCeEEEEEE---ECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCC
Confidence 333333 445777887 377888899999988888665 46666666655 56788888888 4444 333 34
Q ss_pred CcEEEEEccCc
Q psy7482 290 GDLVVWELNED 300 (327)
Q Consensus 290 g~v~iw~~~~~ 300 (327)
+.|++||+.++
T Consensus 388 ~~v~~~d~~~g 398 (695)
T 2bkl_A 388 RQIYKTSVSTG 398 (695)
T ss_dssp EEEEEEETTTC
T ss_pred CEEEEEECCCC
Confidence 67999999876
No 189
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.81 E-value=1.8e-16 Score=129.30 Aligned_cols=285 Identities=9% Similarity=0.058 Sum_probs=195.3
Q ss_pred CCCEEEEecC-----CCeEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCCCe
Q psy7482 23 TSKLAASSGA-----DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSWQ 87 (327)
Q Consensus 23 ~~~~l~~~~~-----dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~ 87 (327)
+++.+++... ++.|.+.|..+++.+..+.....+ . ++++|||++++++. .++.|.+||..+++
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 7777776654 679999999999999888765555 4 99999999988775 35789999999999
Q ss_pred EEEeEEecc-----cCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-E
Q psy7482 88 LEKLFKKAH-----KGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-L 159 (327)
Q Consensus 88 ~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 159 (327)
....+..+. .+.....+.++|||++++++.. ++.|.++|+.+++.+..+..... ...+....+ +
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--------~~~~P~g~~~~ 192 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--------YHIFPTAPDTF 192 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--------EEEEEEETTEE
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--------ceeecCCCcee
Confidence 988884332 0112678999999999998864 68999999999998877765432 111222222 3
Q ss_pred EEeecCCeEEEEEecC-CceeeEec-----CCCce-eEEEee-cCceEEEeCCCCcEEEEEcCCCc--eeEEee------
Q psy7482 160 YAIPIQNKAVVFSVEK-AGVLQTLK-----SESKV-HSVCFL-NETTVCTGNEESAITAYNLTDGS--HLWQIK------ 223 (327)
Q Consensus 160 l~~~~~~~i~i~d~~~-~~~~~~~~-----~~~~i-~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~------ 223 (327)
++.+.||.+.+.++.. ++...... ...++ ....|. +++.++..+.+|.+++.|+.... .+..+.
T Consensus 193 ~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~ 272 (386)
T 3sjl_D 193 FMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAE 272 (386)
T ss_dssp EEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred EEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccc
Confidence 3344477777777765 44322111 11222 124564 56665556668999999997654 232222
Q ss_pred ----ecccceEEEEEEecCCCcEEEEecC----------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--c-EEEEE
Q psy7482 224 ----ASASRIKGLVFFSIPQETTVCTGNE----------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--N-HLICI 286 (327)
Q Consensus 224 ----~~~~~v~~~~~~~s~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~~ 286 (327)
........+++. ++++.++.... .+.|.+.|+.+++.+..+.... .++++++++ + +|++.
T Consensus 273 ~~~g~~p~g~q~~a~~--~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 273 RADGWRPGGWQQVAYH--RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp HHTTEEECSSSCEEEE--TTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEE
T ss_pred ccccccCCCcceeeEC--CCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEE
Confidence 011233446664 78877776532 2579999999999998887543 788999999 3 56665
Q ss_pred -ecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482 287 -TSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 287 -~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~ 325 (327)
..++.|.++|..+. +.+.........+.|.+++|
T Consensus 350 n~~~~~VsViD~~t~-----k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 350 STGDKTLYIHDAESG-----EELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp ETTTTEEEEEETTTC-----CEEEEECCCCSSCCEEEECC
T ss_pred cCCCCeEEEEECCCC-----cEEEEecCCCCCceeEECCc
Confidence 45899999999988 44455555566777888876
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.80 E-value=9.4e-17 Score=131.92 Aligned_cols=239 Identities=10% Similarity=0.109 Sum_probs=162.5
Q ss_pred ccEEEEEECCCCCeEEEec---------CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---C--
Q psy7482 55 GTITCLKFTPEGSHLISCS---------DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---K-- 120 (327)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g-- 120 (327)
..+..+++ ||+.++... .++.|.+||+.+++... + .. +..+.|+|||+.|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l-----~~-~~~~~~SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I-----EN-ATMPRISPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E-----ES-CEEEEECTTSSEEEEEEEETTTTEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c-----cc-CCCeEECCCCCEEEEEEeccCCCcc
Confidence 34677777 888877542 25679999998876432 2 33 8889999999999887754 2
Q ss_pred CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C---------------------------CeEEEEE
Q psy7482 121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q---------------------------NKAVVFS 172 (327)
Q Consensus 121 ~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---------------------------~~i~i~d 172 (327)
.|.+||+.+++........ . +..+.|+|+++.|+.+. + ..|++||
T Consensus 86 ~l~~~~~~~g~~~~l~~~~------~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAK------N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp EEEEEETTTTEEEEEEEES------E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred eEEEEECCCCceEEEEcCC------C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 3888888877655443321 2 78899999999887764 2 5789999
Q ss_pred ecCCceeeEecCCCceeEEEeecCceEEEeCCC------C-cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEE
Q psy7482 173 VEKAGVLQTLKSESKVHSVCFLNETTVCTGNEE------S-AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCT 245 (327)
Q Consensus 173 ~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d------~-~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~ 245 (327)
+.+++.+..+... .+..+.|+|+++++++..+ . ...+|.+.+++ ...+..+ ..+..+ +|+|++|+.
T Consensus 159 ~~~~~~~~~l~~~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~----spdg~~l~~ 231 (347)
T 2gop_A 159 TESEEVIEEFEKP-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV----DSDGERILL 231 (347)
T ss_dssp TTTTEEEEEEEEE-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE----EECSSCEEE
T ss_pred CCCCeEEeeecCC-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE----CCCCCEEEE
Confidence 9888764444433 7889999999955555433 2 34444444443 4444444 444443 389998887
Q ss_pred ecCC--------CeEEEEEcCCCceeEEeecccCceEE-EeeeCcEEEEEecCCcEEEEEccCccCCCceeeeecCCCCc
Q psy7482 246 GNEE--------SAITAYNLTDGSHLWHIKASASRIKG-LASHRNHLICITSAGDLVVWELNEDVTREPQRVSATNDGCR 316 (327)
Q Consensus 246 ~~~d--------~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 316 (327)
++.+ ..|.+|| +++.......+...+.. +.|+..++++++.++.+++| +..+ ....+ ..+...
T Consensus 232 ~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg~~~~~~~~~~~~l~-~~~g---~~~~~--~~~~~~ 303 (347)
T 2gop_A 232 YGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLY-IWDG---EIKPI--AKGRHW 303 (347)
T ss_dssp EECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTEEEEEEEETTEEEEE-EESS---SEEEE--ECSSSE
T ss_pred EEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCcEEEEEecCCcEEEE-EcCC---ceEEE--ecCCCe
Confidence 6644 3688888 55555445556677776 88874577888899999999 8843 33333 233567
Q ss_pred eEEEEeCC
Q psy7482 317 FTCLAIRP 324 (327)
Q Consensus 317 i~~l~~~p 324 (327)
|.+++|+|
T Consensus 304 v~~~~~s~ 311 (347)
T 2gop_A 304 IMGFDVDE 311 (347)
T ss_dssp EEEEEESS
T ss_pred EEeeeeeC
Confidence 88999987
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.80 E-value=1.5e-17 Score=149.16 Aligned_cols=274 Identities=9% Similarity=0.030 Sum_probs=176.7
Q ss_pred cCCccEEEEEe--CCCEEE-----EecCCCeEEEEEccccccccccccccccE--EEEEECCCCCeEEEecCCCc-----
Q psy7482 12 SHTASVRSVAA--TSKLAA-----SSGADETVVLYDMVKRKQSGALMQHEGTI--TCLKFTPEGSHLISCSDDGS----- 77 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~-----~~~~dg~v~~w~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~----- 77 (327)
+|...+.+++| ||++|| .|+.+..|++||+.+++.+.. .+...+ ..++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC--cccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 46667888888 999998 555567899999999886511 111222 67899999999999888766
Q ss_pred --------EEEEEcCCCeEE--EeEE-ecccCCceeeEEEecCCCEEEEEeCCC----CEEEEEcCCCceeeeeeccccC
Q psy7482 78 --------IAIFRVGSWQLE--KLFK-KAHKGTAVNHISIHPSGKLALSVGKDK----TLRTWNLVKGRSAYITNLSSYG 142 (327)
Q Consensus 78 --------i~iw~~~~~~~~--~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~ 142 (327)
|++|++.+++.. ..+. ..+... +..+.|+|||++|+.++.++ .|.+|+..+++.........
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~-~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-- 272 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT-FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG-- 272 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC-EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS--
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEE-EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC--
Confidence 999999887632 2221 223334 88999999999998887666 67777765554433322211
Q ss_pred ccccceEEEEEccCCcEEEeec----CCeEEEEEecCCce---eeEecC--CCceeEEEeecCceEEEeCCCCcEEEEEc
Q psy7482 143 VGFENLDSVVWSPEGLLYAIPI----QNKAVVFSVEKAGV---LQTLKS--ESKVHSVCFLNETTVCTGNEESAITAYNL 213 (327)
Q Consensus 143 ~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~~~~~---~~~~~~--~~~i~~~~~~~~~~l~~~~~d~~i~i~d~ 213 (327)
......+ +++.+++.+. ++.|.+||+.+++. ...+.+ ...+..++++.+.++++...++..++|.+
T Consensus 273 ----~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 273 ----AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp ----CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred ----ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEE
Confidence 1445555 5666444443 47899999987653 333333 45678888885577888888998888865
Q ss_pred C-CCceeEEeeec-ccceEEEEEEecCCCcEEE----EecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEe
Q psy7482 214 T-DGSHLWQIKAS-ASRIKGLVFFSIPQETTVC----TGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICIT 287 (327)
Q Consensus 214 ~-~~~~~~~~~~~-~~~v~~~~~~~s~~~~~l~----~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 287 (327)
. +++....+..+ ...+..+.+ +|+++.++ +....+.|++||+.+++. ..+..+......-.+....+..-+
T Consensus 348 ~~~g~~~~~l~~~~~~~v~~~~~--s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~~~~ 424 (695)
T 2bkl_A 348 TLKGKPVRTVQLPGVGAASNLMG--LEDLDDAYYVFTSFTTPRQIYKTSVSTGKS-ELWAKVDVPMNPEQYQVEQVFYAS 424 (695)
T ss_dssp ETTCCEEEECCCSSSSEECCCBS--CTTCSEEEEEEEETTEEEEEEEEETTTCCE-EEEEECCCSSCGGGEEEEEEEEEC
T ss_pred eCCCCeeEEecCCCCeEEEEeec--CCCCCEEEEEEcCCCCCCEEEEEECCCCcE-EEEecCCCCCCHHHCeEEEEEEEC
Confidence 4 45556666554 556677777 47887766 334457899999988763 334433322100011123343444
Q ss_pred cCC-cEEEEEcc
Q psy7482 288 SAG-DLVVWELN 298 (327)
Q Consensus 288 ~dg-~v~iw~~~ 298 (327)
.|| .|..|-+.
T Consensus 425 ~dg~~i~~~~~~ 436 (695)
T 2bkl_A 425 KDGTKVPMFVVH 436 (695)
T ss_dssp TTSCEEEEEEEE
T ss_pred CCCCEEEEEEEE
Confidence 555 57666543
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.80 E-value=1.3e-16 Score=143.37 Aligned_cols=240 Identities=12% Similarity=0.080 Sum_probs=165.3
Q ss_pred cCCccEEEEEe--CCCEEEEecCCC-----eEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCc-------
Q psy7482 12 SHTASVRSVAA--TSKLAASSGADE-----TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS------- 77 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~~~~~dg-----~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~------- 77 (327)
+|...+..++| ||++||.+..++ .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 35456788888 999998765433 8999999998876533222 23678999999999998887765
Q ss_pred ---------EEEEEcCCCeEE--EeEEe-cccCCceeeEEEecCCCEEEEEeC-----CCCEEEEEcCC------Cc-ee
Q psy7482 78 ---------IAIFRVGSWQLE--KLFKK-AHKGTAVNHISIHPSGKLALSVGK-----DKTLRTWNLVK------GR-SA 133 (327)
Q Consensus 78 ---------i~iw~~~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~------~~-~~ 133 (327)
|++|++.+++.. ..+.. .+... +..+.|+|||++|+.++. +..|.+||+.+ +. ..
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~-~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW-MGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC-EEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeE-EEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 999999877632 22211 12333 778999999999888765 56899999976 43 22
Q ss_pred eeeeccccCccccceEEEEEccCCcEEEeec-----CCeEEEEEecCCce---eeEecCCC--ceeEEEeecC-ceEEEe
Q psy7482 134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPI-----QNKAVVFSVEKAGV---LQTLKSES--KVHSVCFLNE-TTVCTG 202 (327)
Q Consensus 134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~i~i~d~~~~~~---~~~~~~~~--~i~~~~~~~~-~~l~~~ 202 (327)
..+..... .+.. .|+|+|..|+..+ .+.|.+||+.+++. ...+.+.. .+..++|+++ .++++.
T Consensus 280 ~~l~~~~~-----~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 280 VKLIDNFE-----GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp EEEECSSS-----SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEE
T ss_pred EEeeCCCC-----cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEE
Confidence 22222211 1333 4888888766553 24799999987642 23333433 6888999966 566777
Q ss_pred CCCCc--EEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEe----cCCCeEEEEEcCCCc
Q psy7482 203 NEESA--ITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG----NEESAITAYNLTDGS 261 (327)
Q Consensus 203 ~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~----~~d~~i~i~d~~~~~ 261 (327)
..++. |.+|++.+++.+..+..+.+.+..+.+ +|++..++.. ...+.++.||+.+++
T Consensus 354 ~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~--s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 354 LHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSG--QKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EETTEEEEEEEETTTCCEEEEECCCSSEEEEEEC--CTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EECCEEEEEEEECCCCCEEEecCCCCceEEEEec--CCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 77774 666787678777778777777888877 4787665532 345789999998877
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.79 E-value=3.1e-15 Score=129.56 Aligned_cols=278 Identities=10% Similarity=0.055 Sum_probs=195.7
Q ss_pred cEEEEEe--CCCEEEEecCCCeEEEEEcc--ccccccccccccccEEEEEEC----CCCCeEEEecC-CCcEEEEEcCCC
Q psy7482 16 SVRSVAA--TSKLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFT----PEGSHLISCSD-DGSIAIFRVGSW 86 (327)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~dg~v~~w~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-d~~i~iw~~~~~ 86 (327)
.+..+.+ |++++++++.|+.|.+||+. +++.+..+.... ....++|+ |||++++++.. +++|.++|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 4556777 89999999999999999995 777777776533 46789999 69998887765 589999999999
Q ss_pred eEEEeEEec---------ccCCceeeEEEecCCCE-EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC
Q psy7482 87 QLEKLFKKA---------HKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE 156 (327)
Q Consensus 87 ~~~~~~~~~---------~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 156 (327)
+.+..+... |....+..+..++++.. ++....+|.|.++|....+.......... .....+.|+|+
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~----~~~~d~~~~pd 352 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE----RFLHDGGLDGS 352 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC----SSEEEEEECTT
T ss_pred cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecc----ccccCceECCC
Confidence 988877432 12223778888887654 44455679999999877654333332221 12778899999
Q ss_pred CcEEEeec--CCeEEEEEecCCceeeEecC-CCce---eEEE-eecC-ceEE-EeC-CCCcEEEEEcCC-------Ccee
Q psy7482 157 GLLYAIPI--QNKAVVFSVEKAGVLQTLKS-ESKV---HSVC-FLNE-TTVC-TGN-EESAITAYNLTD-------GSHL 219 (327)
Q Consensus 157 ~~~l~~~~--~~~i~i~d~~~~~~~~~~~~-~~~i---~~~~-~~~~-~~l~-~~~-~d~~i~i~d~~~-------~~~~ 219 (327)
+++++++. ++.|.++|+.+++....+.. .... .... ++|+ +.++ ++. .++.|.++|..+ .+.+
T Consensus 353 gr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv 432 (567)
T 1qks_A 353 HRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKIL 432 (567)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEE
Confidence 99887764 78999999999987766653 2111 1223 5776 5544 443 568999999987 5677
Q ss_pred EEeeecccceEEEEEEecCCCcEEEEecC-------CCeEEEEEcCCC-----ce-eEEee--------cccCceEEEee
Q psy7482 220 WQIKASASRIKGLVFFSIPQETTVCTGNE-------ESAITAYNLTDG-----SH-LWHIK--------ASASRIKGLAS 278 (327)
Q Consensus 220 ~~~~~~~~~v~~~~~~~s~~~~~l~~~~~-------d~~i~i~d~~~~-----~~-~~~~~--------~~~~~v~~~~~ 278 (327)
+++......-..+..+ |+++++.+... ...|.++|+.+. .. ...+. .....+..+.|
T Consensus 433 ~~i~~~g~g~~~i~~~--p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (567)
T 1qks_A 433 DSFPALGGGSLFIKTH--PNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEF 510 (567)
T ss_dssp EEEECSCSCCCCEECC--TTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEE
T ss_pred EEEecCCCCCEEEEeC--CCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeE
Confidence 7777554333445553 99999988663 358999999876 21 12332 12347889999
Q ss_pred eC--cEEEEEe-----cCCcEEEEEccCc
Q psy7482 279 HR--NHLICIT-----SAGDLVVWELNED 300 (327)
Q Consensus 279 ~~--~~l~~~~-----~dg~v~iw~~~~~ 300 (327)
++ +.+..+. .++.|.|+|..+.
T Consensus 511 ~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 511 NKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp CTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 99 4444442 3788999998887
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.78 E-value=6.9e-16 Score=122.13 Aligned_cols=209 Identities=14% Similarity=0.151 Sum_probs=160.4
Q ss_pred CCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc
Q psy7482 65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG 144 (327)
Q Consensus 65 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 144 (327)
.++.|++++.++.|.+||.++++.+..+ ..+....+.++.+.|+|++++ +.++.|..||. +++.+..+.....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~-~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~--- 76 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEY-PLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAG--- 76 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEE-ECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTT---
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEe-CCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCC---
Confidence 4678999999999999999999999998 444422288999999999888 34678999998 7888887765321
Q ss_pred ccceEEEEEccCCcEEEeec--CCeEEEEEecCCceeeEecCC-------CceeEEEeecC-ceEEEeCCCCcEEEEEcC
Q psy7482 145 FENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQTLKSE-------SKVHSVCFLNE-TTVCTGNEESAITAYNLT 214 (327)
Q Consensus 145 ~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~~~-------~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~ 214 (327)
..+.++.+.|+|+++++.. ++.+..+|. +++.+..+... .....++..++ +++++...++.|..||.+
T Consensus 77 -~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 77 -CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp -CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred -ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 2378899999999988865 567777775 67777766511 23445667777 788888899999999988
Q ss_pred CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC------ceEEEeeeC--cEEEEE
Q psy7482 215 DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS------RIKGLASHR--NHLICI 286 (327)
Q Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~--~~l~~~ 286 (327)
++.+.++.... ...++.. .++|+.+++++.++.|..+|..+++.++++..+.. .+..++..+ ..+++.
T Consensus 155 -G~~~w~~~~~~-~~~~~~~--~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 155 -GQLLNSVKLSG-TPFSSAF--LDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp -SCEEEEEECSS-CCCEEEE--CTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred -CCEEEEEECCC-CccceeE--cCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 99999987653 3445555 38999999999889999999999999999875431 256666666 555544
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.78 E-value=2.4e-16 Score=124.75 Aligned_cols=237 Identities=10% Similarity=0.070 Sum_probs=163.3
Q ss_pred cEEEEEe--CCCEEE-EecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482 16 SVRSVAA--TSKLAA-SSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (327)
Q Consensus 16 ~v~~~~~--~~~~l~-~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 92 (327)
...++++ ++++++ +...++.|.+||..+.........+...+.++++.++++++++.. ++.|.+||....... .+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence 6778888 677666 546789999999765543322223335678899999998666655 889999998765433 22
Q ss_pred EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEE
Q psy7482 93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVF 171 (327)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~ 171 (327)
....... +..+++.++++++++...++.|.+|+..+....... .. ....+..++++++++++++.. ++.|.+|
T Consensus 103 ~~~~~~~-p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~----~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 103 PFDGLNY-PEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-FT----GLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp CCCSCSS-EEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC-CC----SCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred ecCCcCC-CcceEECCCCCEEEEECCCCEEEEEECCCceeEeec-cc----cCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 1222244 899999999987777777889999976544332211 11 112378899999999777765 7899999
Q ss_pred EecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC
Q psy7482 172 SVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE 249 (327)
Q Consensus 172 d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d 249 (327)
|........... ....+..++++++ .++++...++.|.+||............+...+.++++ +++|+++++...+
T Consensus 177 ~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~--~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 177 EAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAV--DSDRTVYVADRGN 254 (270)
T ss_dssp CTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEE--CTTCCEEEEEGGG
T ss_pred ecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEE--CCCCCEEEEECCC
Confidence 987765443322 3367889999998 45555567889999998765433322233356788998 4889988888899
Q ss_pred CeEEEEEcCCCce
Q psy7482 250 SAITAYNLTDGSH 262 (327)
Q Consensus 250 ~~i~i~d~~~~~~ 262 (327)
+.|+++++...+.
T Consensus 255 ~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 255 DRVVKLTSLEHHH 267 (270)
T ss_dssp TEEEEECCCGGGS
T ss_pred CEEEEEcCCCccc
Confidence 9999999876543
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.77 E-value=5.1e-16 Score=122.90 Aligned_cols=235 Identities=9% Similarity=0.035 Sum_probs=162.9
Q ss_pred cEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceee
Q psy7482 56 TITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (327)
Q Consensus 56 ~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 134 (327)
...++++++++++++ +...++.|.+|+..+....... ...... +.++++.++++++++.. ++.|..||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~-p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~- 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP-FNGLYQ-PQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT- 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECC-CCSCCS-CCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEe-eCCcCC-cceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-
Confidence 678999999998777 5477889999987655432221 223234 88999999998666555 889999998755432
Q ss_pred eeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEE
Q psy7482 135 ITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAY 211 (327)
Q Consensus 135 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~ 211 (327)
...... ...+..++++|+++++++.. ++.|.+|+..+........ ....+..++++++ .++++...++.|.+|
T Consensus 101 ~~~~~~----~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 101 VLPFDG----LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp ECCCCS----CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred eeecCC----cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 221111 13388999999998777765 7899999765543322222 3346788999998 555555567899999
Q ss_pred EcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecC
Q psy7482 212 NLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSA 289 (327)
Q Consensus 212 d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d 289 (327)
|............+...+..+++ +++|.++++...++.|.+|+............+...+.++++++ +++++...+
T Consensus 177 ~~~~~~~~~~~~~~~~~p~~i~~--d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 177 EAESNNQVVLPFTDITAPWGIAV--DEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp CTTTCCEEECCCSSCCSEEEEEE--CTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred ecCCCceEeecccCCCCceEEEE--CCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 98776544333333356788888 48888888877889999999866544332223335789999998 777788889
Q ss_pred CcEEEEEccCc
Q psy7482 290 GDLVVWELNED 300 (327)
Q Consensus 290 g~v~iw~~~~~ 300 (327)
+.|+++++...
T Consensus 255 ~~v~~~~~~~~ 265 (270)
T 1rwi_B 255 DRVVKLTSLEH 265 (270)
T ss_dssp TEEEEECCCGG
T ss_pred CEEEEEcCCCc
Confidence 99999999877
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.77 E-value=5.1e-14 Score=113.01 Aligned_cols=277 Identities=8% Similarity=0.035 Sum_probs=188.0
Q ss_pred EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccccccc-ccccccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482 6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (327)
Q Consensus 6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 82 (327)
+.+.+......+.++++ ++++.++...++.|.+||.. ++... .+......+..+++.+++++.++...++.|..+|
T Consensus 11 ~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 11 EEFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLS 89 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEEC
Confidence 44555556678899998 67777777778999999987 54332 2223346789999999998877777788899999
Q ss_pred cCCCeEEEeEEec-ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482 83 VGSWQLEKLFKKA-HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA 161 (327)
Q Consensus 83 ~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 161 (327)
.. ++.. .+... .... +.++++.++++++++...++.|..+|.. ++... ...... ...+..+++.+++++++
T Consensus 90 ~~-g~~~-~~~~~~~~~~-~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~~---~~~~~~i~~d~~g~l~v 161 (300)
T 2qc5_A 90 KK-GGFT-EYPLPQPDSG-PYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YDLPNK---GSYPAFITLGSDNALWF 161 (300)
T ss_dssp TT-SCEE-EEECSSTTCC-EEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EECSST---TCCEEEEEECTTSSEEE
T ss_pred CC-CCeE-EecCCCCCCC-CccceECCCCCEEEEccCCCeEEEECCC-CCEEE-ccCCCC---CCCceeEEECCCCCEEE
Confidence 87 5553 23122 2334 8999999999877777667889999987 55432 222211 23488999999999777
Q ss_pred eec-CCeEEEEEecCCceeeEe-c-CCCceeEEEeecCceE-EEeCCCCcEEEEEcCCCceeEE-eeecccceEEEEEEe
Q psy7482 162 IPI-QNKAVVFSVEKAGVLQTL-K-SESKVHSVCFLNETTV-CTGNEESAITAYNLTDGSHLWQ-IKASASRIKGLVFFS 236 (327)
Q Consensus 162 ~~~-~~~i~i~d~~~~~~~~~~-~-~~~~i~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~ 236 (327)
+.. ++.|..+|. +++..... . ....+..+++++++.+ ++....+.|..||. +++.... +..+...+.++++
T Consensus 162 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-- 237 (300)
T 2qc5_A 162 TENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITA-- 237 (300)
T ss_dssp EETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE--
T ss_pred EecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEE--
Confidence 665 788999998 55544321 1 3456889999988544 44455678999998 4443332 2334456788888
Q ss_pred cCCCcEEEEecCCCeEEEEEcCCCcee-EEeecccCceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482 237 IPQETTVCTGNEESAITAYNLTDGSHL-WHIKASASRIKGLASHR-NHLICITSAGDLVVWEL 297 (327)
Q Consensus 237 s~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~ 297 (327)
+++|++.++...++.|..||. +++.. ..+......+.++++++ ..|..++.. .|..++.
T Consensus 238 d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p 298 (300)
T 2qc5_A 238 GKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLNL 298 (300)
T ss_dssp CSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEEE
T ss_pred CCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEccC-ceEEeCC
Confidence 478887777777799999998 44432 22333345678898888 445555544 5655554
No 198
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.76 E-value=4e-14 Score=116.86 Aligned_cols=261 Identities=9% Similarity=0.006 Sum_probs=180.0
Q ss_pred CCCEEEEecC--CC---eEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCCCe
Q psy7482 23 TSKLAASSGA--DE---TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSWQ 87 (327)
Q Consensus 23 ~~~~l~~~~~--dg---~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~ 87 (327)
+++++++... .. .|.++|..+++.+..+.....+ .++++||+++++++. .++.|.+||..+.+
T Consensus 31 ~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 31 DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 7777776653 22 8899999999988777754444 899999999998875 36789999999988
Q ss_pred EEEeEEec-c-----cCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeee-eeccccCccccceEEEEEccCCc
Q psy7482 88 LEKLFKKA-H-----KGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYI-TNLSSYGVGFENLDSVVWSPEGL 158 (327)
Q Consensus 88 ~~~~~~~~-~-----~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~ 158 (327)
....+..+ . ... ...+.|+|||++|+++.. ++.|.++| .+++.... +.... ++.+.|++.
T Consensus 109 ~~~~i~~~~~~~~~~g~~-p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---------~~~~~~~~~ 177 (373)
T 2mad_H 109 PIADIELPDAPRFDVGPY-SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---------CYHIHPGAP 177 (373)
T ss_pred EEEEEECCCccccccCCC-ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc---------eEEEEeCCC
Confidence 88777332 0 122 567899999999998874 47899999 98887655 43322 244555553
Q ss_pred --EEEeecCCeEEEEEecCCceeeEec------CCCce-eEEEeecC-ceEEEeCCCCcEEEEEcCCCc--eeEEeeec-
Q psy7482 159 --LYAIPIQNKAVVFSVEKAGVLQTLK------SESKV-HSVCFLNE-TTVCTGNEESAITAYNLTDGS--HLWQIKAS- 225 (327)
Q Consensus 159 --~l~~~~~~~i~i~d~~~~~~~~~~~------~~~~i-~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~- 225 (327)
+++.+.||.+.++|. +++...... ...++ ....+.++ +.++..+..+.+.+.|+.... .+..+...
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALS 256 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecC
Confidence 333334899999999 777663322 11121 23445555 444444477899999987543 22222211
Q ss_pred ---------ccceEEEEEEecCCCcEEEEecC----------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--c-EE
Q psy7482 226 ---------ASRIKGLVFFSIPQETTVCTGNE----------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--N-HL 283 (327)
Q Consensus 226 ---------~~~v~~~~~~~s~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~l 283 (327)
......+.+ +++++.+.++.. ++.|.++|..+++.+.++.... ...+++|+| + ++
T Consensus 257 ~~~~~~~~~p~g~~~~~~--s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l 333 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAY--LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDL 333 (373)
T ss_pred CcccccceecCceEeEEE--CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEE
Confidence 112333566 488887777543 3579999999999988886433 678999999 5 77
Q ss_pred EEEe-cCCcEEEEEccCc
Q psy7482 284 ICIT-SAGDLVVWELNED 300 (327)
Q Consensus 284 ~~~~-~dg~v~iw~~~~~ 300 (327)
+++. .++.|.++|..+.
T Consensus 334 ~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 334 YALSAGTEVLHIYDAGAG 351 (373)
T ss_pred EEEcCCCCeEEEEECCCC
Confidence 7777 5899999999988
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.75 E-value=6.4e-14 Score=112.37 Aligned_cols=257 Identities=11% Similarity=0.034 Sum_probs=174.7
Q ss_pred cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc
Q psy7482 52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (327)
Q Consensus 52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 131 (327)
.+...+.++++.++|+.+++...++.|..||.. ++............ +.++++.+++.++++...++.|..||.. ++
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~-~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAK-VMCLTISSDGEVWFTENAANKIGRITKK-GI 88 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCC-EEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCc-eeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence 344678999999999987777668899999988 55433221223344 8999999999887777667889999976 43
Q ss_pred eeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe-c-CCCceeEEEeecCc-eEEEeCCCCc
Q psy7482 132 SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL-K-SESKVHSVCFLNET-TVCTGNEESA 207 (327)
Q Consensus 132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~-~-~~~~i~~~~~~~~~-~l~~~~~d~~ 207 (327)
. ..+..+.. ...+..+++++++.++++.. ++.|..||. +++..... . ....+..+++.+++ .+++...++.
T Consensus 89 ~-~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 89 I-KEYTLPNP---DSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp E-EEEECSST---TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred E-EEEeCCCc---CCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence 2 22222211 23488999999998888775 789999998 55443322 2 34578999999985 4455556789
Q ss_pred EEEEEcCCCceeEE-eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE-EeecccCceEEEeeeC--cEE
Q psy7482 208 ITAYNLTDGSHLWQ-IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW-HIKASASRIKGLASHR--NHL 283 (327)
Q Consensus 208 i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~--~~l 283 (327)
|..||. +++.... .......+..+++ ++++.++++...++.|.+||. +++... ....+...+.++++++ .++
T Consensus 164 i~~~~~-~g~~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 239 (299)
T 2z2n_A 164 IGRITE-SGDITEFKIPTPASGPVGITK--GNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLW 239 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEE--CTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEE
T ss_pred EEEEcC-CCcEEEeeCCCCCCcceeEEE--CCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEE
Confidence 999998 6654332 2333455778888 478888777777889999998 665332 2333456789999998 544
Q ss_pred EEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482 284 ICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 284 ~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~ 325 (327)
++...++.|..|+.. + ....+........+.++++ ++
T Consensus 240 v~~~~~~~i~~~d~~-g---~~~~~~~~~~~~~~~~i~~-~~ 276 (299)
T 2z2n_A 240 FTEWGANKIGRLTSN-N---IIEEYPIQIKSAEPHGICF-DG 276 (299)
T ss_dssp EEETTTTEEEEEETT-T---EEEEEECSSSSCCEEEEEE-CS
T ss_pred EeccCCceEEEECCC-C---ceEEEeCCCCCCccceEEe-cC
Confidence 444467889999983 3 2222222233456778877 54
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.74 E-value=1.2e-14 Score=117.51 Aligned_cols=238 Identities=12% Similarity=0.121 Sum_probs=166.0
Q ss_pred ccEEEEEECCCCCeEEE-------ecCCCcEEEEEcCCCeEEEeEEe----cccCCceeeEEEecC-CCEEEEEeCCCCE
Q psy7482 55 GTITCLKFTPEGSHLIS-------CSDDGSIAIFRVGSWQLEKLFKK----AHKGTAVNHISIHPS-GKLALSVGKDKTL 122 (327)
Q Consensus 55 ~~v~~~~~~~~~~~l~~-------~~~d~~i~iw~~~~~~~~~~~~~----~~~~~~v~~~~~~~~-~~~l~~~~~dg~i 122 (327)
....+++|.++++++++ +..++.|..||..+++..... . ++... +.+++++++ +++++ ++..+.|
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~-~~~i~~~~~~g~l~v-~~~~~~l 94 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC-KPEVNGYGGI-PAGCQCDRDANQLFV-ADMRLGL 94 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE-CCEETTEECC-EEEEEECSSSSEEEE-EETTTEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEE-ecccCCCCCC-CceEEEecCCCcEEE-EECCCCE
Confidence 34678999999988777 677889999998877764332 2 13344 889999998 65444 4444579
Q ss_pred EEEEcCCCceeee-eeccccCccccceEEEEEccCCcEEEeec-C---------------CeEEEEEecCCceeeEecCC
Q psy7482 123 RTWNLVKGRSAYI-TNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q---------------NKAVVFSVEKAGVLQTLKSE 185 (327)
Q Consensus 123 ~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---------------~~i~i~d~~~~~~~~~~~~~ 185 (327)
.+||.. ++.... .... .......+.+++++++++++++.. + +.|..+|.. ++........
T Consensus 95 ~~~d~~-g~~~~~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~ 171 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDS-EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF 171 (314)
T ss_dssp EEEETT-SCEEECCSBCT-TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE
T ss_pred EEEeCC-CCEEEEEeccC-CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC
Confidence 999987 664332 2111 111123488999999998887765 3 567777765 5544433444
Q ss_pred CceeEEEee----cCc-eE-EEeCCCCcEEEEEcC-CCce-----eEEeeecc-cceEEEEEEecCCCcEEEEecCCCeE
Q psy7482 186 SKVHSVCFL----NET-TV-CTGNEESAITAYNLT-DGSH-----LWQIKASA-SRIKGLVFFSIPQETTVCTGNEESAI 252 (327)
Q Consensus 186 ~~i~~~~~~----~~~-~l-~~~~~d~~i~i~d~~-~~~~-----~~~~~~~~-~~v~~~~~~~s~~~~~l~~~~~d~~i 252 (327)
.....++++ |++ .+ ++...++.|.+||.. +++. ...+..+. .....+++ +++|+++++...++.|
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~--d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF--DEDNNLLVANWGSSHI 249 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE--BTTCCEEEEEETTTEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE--CCCCCEEEEEcCCCEE
Confidence 557889999 984 54 444678899999986 4432 22233333 45778888 4899888887778899
Q ss_pred EEEEcCCCceeEEeecccCceEEEeeeC--c-EEEEEecCCcEEEEEccCc
Q psy7482 253 TAYNLTDGSHLWHIKASASRIKGLASHR--N-HLICITSAGDLVVWELNED 300 (327)
Q Consensus 253 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~v~iw~~~~~ 300 (327)
.+||..+++.+..+..+...+.+++|++ + ++++...++.|..|++...
T Consensus 250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 9999987877777777767899999988 5 4455556688999998765
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.73 E-value=7.5e-15 Score=132.58 Aligned_cols=271 Identities=10% Similarity=0.000 Sum_probs=170.9
Q ss_pred EeCCCEEEEecCCCe---EEEEEcc-----ccccccc-----c-ccccccEEEEEECCCCCeEEEecCC-----CcEEEE
Q psy7482 21 AATSKLAASSGADET---VVLYDMV-----KRKQSGA-----L-MQHEGTITCLKFTPEGSHLISCSDD-----GSIAIF 81 (327)
Q Consensus 21 ~~~~~~l~~~~~dg~---v~~w~~~-----~~~~~~~-----~-~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw 81 (327)
..+|++++....++. -.+|... .++.... + .+|...+..++|+|||++|+.+..+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 357887775544332 4455433 3332221 1 2244478899999999999876543 469999
Q ss_pred EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC--------------EEEEEcCCCceeeeeeccccCccccc
Q psy7482 82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT--------------LRTWNLVKGRSAYITNLSSYGVGFEN 147 (327)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------i~iwd~~~~~~~~~~~~~~~~~~~~~ 147 (327)
|+.+++..... .+... +..++|+|| +.|+.+..++. |++|++.++........... .+...
T Consensus 195 dl~tg~~~~~~--~~~~~-~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~-~~~~~ 269 (741)
T 1yr2_A 195 GVADGKPLADE--LKWVK-FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATP-ELPKR 269 (741)
T ss_dssp ETTTCCEEEEE--EEEEE-SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCT-TCTTC
T ss_pred ECCCCCCCCcc--CCCce-eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccC-CCCeE
Confidence 99998875532 12211 457899999 98888877654 88999877653222212211 11123
Q ss_pred eEEEEEccCCcEEEeec-C-----CeEEEEEecCC--ceeeEec-CCCceeEEEeecC-ceEEEeCC----CCcEEEEEc
Q psy7482 148 LDSVVWSPEGLLYAIPI-Q-----NKAVVFSVEKA--GVLQTLK-SESKVHSVCFLNE-TTVCTGNE----ESAITAYNL 213 (327)
Q Consensus 148 v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~~~--~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~----d~~i~i~d~ 213 (327)
+..+.|+|||++++... + ..|++||+.++ +....+. +........ +|+ +.|+..+. ++.|.+||+
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeC
Confidence 78899999999877664 3 38999999877 4133443 444444443 365 66665544 455999998
Q ss_pred CCC--ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC-CCceeEEeecc-cCceEEEeeeC--c-EEEEE
Q psy7482 214 TDG--SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT-DGSHLWHIKAS-ASRIKGLASHR--N-HLICI 286 (327)
Q Consensus 214 ~~~--~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~-~~~v~~~~~~~--~-~l~~~ 286 (327)
.++ +....+..+...+..+.+ .++.++++...|+..++|.+. +++....+..+ .+.+..+.++| + ++++.
T Consensus 349 ~~~~~~~~~l~~~~~~~l~~~~~---~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ 425 (741)
T 1yr2_A 349 SGSTPRFDTVVPESKDNLESVGI---AGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSF 425 (741)
T ss_dssp SSSSCEEEEEECCCSSEEEEEEE---EBTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEE
T ss_pred CCCccccEEEecCCCCeEEEEEE---ECCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEE
Confidence 874 233334445555666776 366788888889887777554 45566666643 56788899988 3 44443
Q ss_pred e---cCCcEEEEEccCc
Q psy7482 287 T---SAGDLVVWELNED 300 (327)
Q Consensus 287 ~---~dg~v~iw~~~~~ 300 (327)
+ ..+.|++||+.++
T Consensus 426 ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 426 SSFTQPATVLALDPATA 442 (741)
T ss_dssp EETTEEEEEEEEETTTT
T ss_pred cCCCCCCEEEEEECCCC
Confidence 3 3477999998775
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.72 E-value=3e-14 Score=115.26 Aligned_cols=236 Identities=10% Similarity=0.144 Sum_probs=160.1
Q ss_pred CCccEEEEEe--CCCEEEE-------ecCCCeEEEEEccccccccccc----cccccEEEEEECCC-CCeEEEecCCCcE
Q psy7482 13 HTASVRSVAA--TSKLAAS-------SGADETVVLYDMVKRKQSGALM----QHEGTITCLKFTPE-GSHLISCSDDGSI 78 (327)
Q Consensus 13 h~~~v~~~~~--~~~~l~~-------~~~dg~v~~w~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~d~~i 78 (327)
.-....+++| +++++++ +..++.|.+||..+++...... ++...+..++++++ ++++++.. .+.|
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l 94 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGL 94 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCE
Confidence 3445678888 6777777 5678899999987776542221 24567899999999 76555444 4479
Q ss_pred EEEEcCCCeEEEe-EEe--cccCCceeeEEEecCCCEEEEEeCC---------------CCEEEEEcCCCceeeeeeccc
Q psy7482 79 AIFRVGSWQLEKL-FKK--AHKGTAVNHISIHPSGKLALSVGKD---------------KTLRTWNLVKGRSAYITNLSS 140 (327)
Q Consensus 79 ~iw~~~~~~~~~~-~~~--~~~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~~~ 140 (327)
.+||.. ++.... ... ......+.+++++++++++++...+ +.|..+|.. ++........
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~- 171 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF- 171 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE-
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC-
Confidence 999988 665443 211 1111227899999999877776554 567777765 4433222111
Q ss_pred cCccccceEEEEEc----cCCcEEEee-c-CCeEEEEEec-CCce-----eeEec-CC-CceeEEEeecCceE-EEeCCC
Q psy7482 141 YGVGFENLDSVVWS----PEGLLYAIP-I-QNKAVVFSVE-KAGV-----LQTLK-SE-SKVHSVCFLNETTV-CTGNEE 205 (327)
Q Consensus 141 ~~~~~~~v~~~~~~----~~~~~l~~~-~-~~~i~i~d~~-~~~~-----~~~~~-~~-~~i~~~~~~~~~~l-~~~~~d 205 (327)
.....++++ |+++.+.++ . ++.|.+||.. +++. ...+. +. ..+..+++++++.+ ++...+
T Consensus 172 -----~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 172 -----QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp -----SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred -----CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC
Confidence 126788999 999655444 3 7899999986 4432 22222 22 56888999998544 444578
Q ss_pred CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE-EEecCCCeEEEEEcCC
Q psy7482 206 SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV-CTGNEESAITAYNLTD 259 (327)
Q Consensus 206 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l-~~~~~d~~i~i~d~~~ 259 (327)
+.|.+||..+++.+..+..+...+.++++ +++++.| ++...++.|..|++..
T Consensus 247 ~~i~~~d~~~g~~~~~~~~~~~~~~~i~~--~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRCPFEKPSNLHF--KPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TEEEEECTTCBSCSEEEECSSSCEEEEEE--CTTSSEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCCcEeEEEeCCCCCceeEEE--CCCCCEEEEEeCCCCeEEEEeCCC
Confidence 89999999877777777767677899999 4899844 5556678999999864
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.71 E-value=2.8e-14 Score=118.53 Aligned_cols=263 Identities=10% Similarity=0.051 Sum_probs=181.0
Q ss_pred CCCEEEEecC-C----CeEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCCCe
Q psy7482 23 TSKLAASSGA-D----ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSWQ 87 (327)
Q Consensus 23 ~~~~l~~~~~-d----g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~ 87 (327)
+++.+++... + +.|.++|..+++.+..+..-..+ .++++||+++|+++. .++.|.++|..+++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 6666555543 2 69999999999999888865555 899999999988876 36789999999999
Q ss_pred EEEeEEec-c-----cCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC-c
Q psy7482 88 LEKLFKKA-H-----KGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-L 158 (327)
Q Consensus 88 ~~~~~~~~-~-----~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 158 (327)
.+..+..+ . ... ...+.++|||++++++.. ++.|.+.|+.+++.+..+..... ....|++ .
T Consensus 161 vv~~I~v~g~~r~~~g~~-P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---------~~~~p~g~~ 230 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTY-QWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---------YHIFPASPT 230 (426)
T ss_dssp EEEEEEETTCCCCCBSCC-GGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---------EEEEEEETT
T ss_pred EEEEEECCCccccccCCC-cceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---------eeeccCCCc
Confidence 98887433 1 122 567899999999999874 57899999999988777665331 1223332 2
Q ss_pred -EEEeecCCeEEEEEecCCceeeE----ec-CCCc-eeEEEeecC-ceEEEeCCCCcEEEEEcCCCcee--EEeee----
Q psy7482 159 -LYAIPIQNKAVVFSVEKAGVLQT----LK-SESK-VHSVCFLNE-TTVCTGNEESAITAYNLTDGSHL--WQIKA---- 224 (327)
Q Consensus 159 -~l~~~~~~~i~i~d~~~~~~~~~----~~-~~~~-i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~--~~~~~---- 224 (327)
+++.+.||.+.+.+..+++.... +. ...+ ...+.+.++ +.++.....+.+.+.|....... ..+..
T Consensus 231 ~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~ 310 (426)
T 3c75_H 231 VFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEA 310 (426)
T ss_dssp EEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTT
T ss_pred EEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccc
Confidence 23333467777777655544422 22 1111 123456777 55555567789999998655421 11110
Q ss_pred ------cccceEEEEEEecCCCcEEEEecC----------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--c-EEEE
Q psy7482 225 ------SASRIKGLVFFSIPQETTVCTGNE----------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--N-HLIC 285 (327)
Q Consensus 225 ------~~~~v~~~~~~~s~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~ 285 (327)
.......+++. ++++.+++... ++.|.++|..+.+.+.++.... ...+++|+| + ++++
T Consensus 311 ~i~~g~~p~g~~~va~s--~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv 387 (426)
T 3c75_H 311 ERADDWRPGGWQQTAYH--RQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYA 387 (426)
T ss_dssp TGGGTEEECSSSCEEEE--GGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEE
T ss_pred ccccccccCCceeeEEc--CCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEE
Confidence 01112235674 78877666532 3579999999999998887543 578999999 5 7888
Q ss_pred Ee-cCCcEEEEEccCc
Q psy7482 286 IT-SAGDLVVWELNED 300 (327)
Q Consensus 286 ~~-~dg~v~iw~~~~~ 300 (327)
.. .++.|.++|..+.
T Consensus 388 ~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 388 LSAGTQTLHIYDAATG 403 (426)
T ss_dssp EETTTTEEEEEETTTC
T ss_pred EcCCCCeEEEEECCCC
Confidence 77 5899999999988
No 204
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.70 E-value=8.5e-14 Score=115.62 Aligned_cols=265 Identities=11% Similarity=0.148 Sum_probs=177.7
Q ss_pred CCCEEEEecCCCeEEEEEccccccccccccc---------cccEE-EEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSGALMQH---------EGTIT-CLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~---------~~~v~-~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 92 (327)
.+..+++++.++.|..+|..+++.+...... ...+. .+.. ++..++.++.++.|..+|..+++.....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 5677778888999999999999887655432 12222 2222 3567888888999999999999988766
Q ss_pred EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEE
Q psy7482 93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFS 172 (327)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d 172 (327)
...... ....... +..++.++.++.|..+|.++++....................... ++.+++...++.+..+|
T Consensus 130 -~~~~~~-~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 130 -KVAGEA-LSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp -ECSSCC-CSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEEEE
T ss_pred -eCCCce-EcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEEEE
Confidence 222211 1222222 447888888999999999999988776654331100000111112 44444444489999999
Q ss_pred ecCCceeeEecCCCc-----------eeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCc
Q psy7482 173 VEKAGVLQTLKSESK-----------VHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET 241 (327)
Q Consensus 173 ~~~~~~~~~~~~~~~-----------i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~ 241 (327)
..+++.+.......+ +.......++.+++++.++.+..+|.++++.+..... .....+.. ++.
T Consensus 205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~----~~~ 278 (376)
T 3q7m_A 205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV----DGN 278 (376)
T ss_dssp TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE----ETT
T ss_pred CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE----ECC
Confidence 999998877763221 1111111247788888899999999999998876643 22334443 466
Q ss_pred EEEEecCCCeEEEEEcCCCceeEEeec-ccCceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482 242 TVCTGNEESAITAYNLTDGSHLWHIKA-SASRIKGLASHRNHLICITSAGDLVVWELNED 300 (327)
Q Consensus 242 ~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~ 300 (327)
.++.++.++.+..+|..+++.++.... ....+.........|+.++.+|.|.++|..++
T Consensus 279 ~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG 338 (376)
T 3q7m_A 279 RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDG 338 (376)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTC
T ss_pred EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCC
Confidence 777777899999999999998887763 22233444445588889999999999999887
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.70 E-value=1.3e-14 Score=131.11 Aligned_cols=238 Identities=13% Similarity=0.090 Sum_probs=156.1
Q ss_pred cCCccEEEEEe--CCCEEEEecCC-----CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCc-------
Q psy7482 12 SHTASVRSVAA--TSKLAASSGAD-----ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS------- 77 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~~~~~d-----g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~------- 77 (327)
+|...+..++| ||++||.++.+ ..|++||+.+++.+.. ..+...+..++|+|| +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 34446777888 99999876543 4699999999886543 112222357899999 98888776554
Q ss_pred -------EEEEEcCCCeE--EEeEEecc--cCCceeeEEEecCCCEEEEEeCCC-----CEEEEEcCCC--ceeeeeecc
Q psy7482 78 -------IAIFRVGSWQL--EKLFKKAH--KGTAVNHISIHPSGKLALSVGKDK-----TLRTWNLVKG--RSAYITNLS 139 (327)
Q Consensus 78 -------i~iw~~~~~~~--~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~~~~~~~~~ 139 (327)
|++|++.+++. ...+ ... ... +..+.|+|||++|+..+.++ .|.+||+.++ +....+...
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~-~~~~~~~~-~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVF-ATPELPKR-GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEE-CCTTCTTC-EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred cCCCCCEEEEEECCCCchhCEEEe-ccCCCCeE-EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence 88999977653 2222 222 223 78899999999988877544 7999999876 312222221
Q ss_pred ccCccccceEEEEEccCCcEEEeec-----CCeEEEEEecCC--ceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEE
Q psy7482 140 SYGVGFENLDSVVWSPEGLLYAIPI-----QNKAVVFSVEKA--GVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAY 211 (327)
Q Consensus 140 ~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~i~i~d~~~~--~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~ 211 (327)
.. ..... ++|+++.|+..+ ++.|.+||+.++ +....+. +...+..+.++.+.++++...++..++|
T Consensus 316 ~~-----~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~ 389 (741)
T 1yr2_A 316 LK-----AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVL 389 (741)
T ss_dssp SS-----SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEE
T ss_pred CC-----ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEE
Confidence 11 13333 347887776654 356999998875 3333344 3445667888755778888888887777
Q ss_pred EcC-CCceeEEeee-cccceEEEEEEecCCCcEEE----EecCCCeEEEEEcCCCc
Q psy7482 212 NLT-DGSHLWQIKA-SASRIKGLVFFSIPQETTVC----TGNEESAITAYNLTDGS 261 (327)
Q Consensus 212 d~~-~~~~~~~~~~-~~~~v~~~~~~~s~~~~~l~----~~~~d~~i~i~d~~~~~ 261 (327)
.+. +++....+.. +...+..+.+. |+++.++ +....+.|++||+.+++
T Consensus 390 ~~~~~g~~~~~l~~~~~~~v~~~~~s--~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 390 AFDLDGKPAGAVSLPGIGSASGLSGR--PGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEETTSCEEEECBCSSSCEEEEEECC--BTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEeCCCCceeeccCCCCeEEEEeecC--CCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 554 4555666654 35667777774 7777665 33445789999998876
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.68 E-value=7e-14 Score=114.13 Aligned_cols=241 Identities=10% Similarity=0.129 Sum_probs=165.9
Q ss_pred EEe--CCCEEEEec----------CCCeEEEEEcccccccccccccc-------ccEEEEEECCCCCeEEEecC--CCcE
Q psy7482 20 VAA--TSKLAASSG----------ADETVVLYDMVKRKQSGALMQHE-------GTITCLKFTPEGSHLISCSD--DGSI 78 (327)
Q Consensus 20 ~~~--~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--d~~i 78 (327)
+++ |+++++++. .++.|.+||..+++.+..+.-.. .....++|+|||++++++.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 555 899887765 36789999999998887764221 23557899999999888764 6899
Q ss_pred EEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC-CceeeeeeccccCccccce-EEEEE-cc
Q psy7482 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK-GRSAYITNLSSYGVGFENL-DSVVW-SP 155 (327)
Q Consensus 79 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v-~~~~~-~~ 155 (327)
.++|+.+++.+..+.... . ...+....+.+++.+.||.+.+.++.+ ++...... ........++ ....| .+
T Consensus 163 sVID~~t~~vv~tI~v~g----~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~-~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPD----C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT-EVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp EEEETTTTEEEEEEECCS----E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC-CCCSCTTSCBCSCCEEETT
T ss_pred EEEECCCCcEEEEEECCC----c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeec-ceeccccccccccceeEcC
Confidence 999999999998883221 1 122333456777888899999999876 55422111 1111111112 12355 46
Q ss_pred CCcEEEeecCCeEEEEEecCCc--eeeEec-----------CCCceeEEEeecC-ceEEEeCC----------CCcEEEE
Q psy7482 156 EGLLYAIPIQNKAVVFSVEKAG--VLQTLK-----------SESKVHSVCFLNE-TTVCTGNE----------ESAITAY 211 (327)
Q Consensus 156 ~~~~l~~~~~~~i~i~d~~~~~--~~~~~~-----------~~~~i~~~~~~~~-~~l~~~~~----------d~~i~i~ 211 (327)
+|+++.++.+|.+++.|..+.. ....+. .......++++++ +++++... .+.|.++
T Consensus 237 dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~vi 316 (386)
T 3sjl_D 237 AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 316 (386)
T ss_dssp TTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEE
Confidence 8877777778999999997654 333331 1233445777887 66555432 3579999
Q ss_pred EcCCCceeEEeeecccceEEEEEEecCCCc-EEEE-ecCCCeEEEEEcCCCceeEEeecc
Q psy7482 212 NLTDGSHLWQIKASASRIKGLVFFSIPQET-TVCT-GNEESAITAYNLTDGSHLWHIKAS 269 (327)
Q Consensus 212 d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~~-~~~d~~i~i~d~~~~~~~~~~~~~ 269 (327)
|+++++.+.++.... .+..+++ +++++ +|++ ...++.|.++|..+++.+.++...
T Consensus 317 D~~t~kv~~~i~vg~-~~~~lav--s~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 317 DAKTGERLAKFEMGH-EIDSINV--SQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp ETTTCCEEEEEEEEE-EECEEEE--CSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred ECCCCeEEEEEECCC-CcceEEE--CCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 999999998886543 5788999 48886 6655 455899999999999998888754
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.68 E-value=1.6e-12 Score=104.22 Aligned_cols=257 Identities=8% Similarity=0.029 Sum_probs=173.2
Q ss_pred ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482 53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (327)
Q Consensus 53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 132 (327)
....+.++++.++|+..++...++.|.+||.. ++............ +..+++.+++++.++...++.|..+|.. ++.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~-~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAK-VMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCC-EEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCc-ceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 34568899999999988877778999999988 55543221222234 8999999999877776667889999987 554
Q ss_pred eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeE-ec-CCCceeEEEeecC-ceEEEeCCCCcE
Q psy7482 133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQT-LK-SESKVHSVCFLNE-TTVCTGNEESAI 208 (327)
Q Consensus 133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~-~~-~~~~i~~~~~~~~-~~l~~~~~d~~i 208 (327)
. .+..... ...+..+++.++++++++.. ++.|..+|.. ++.... +. ....+..+++.++ .++++...++.|
T Consensus 95 ~-~~~~~~~---~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 95 T-EYPLPQP---DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp E-EEECSST---TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred E-EecCCCC---CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 2 2322211 13488999999999888776 7899999987 554422 22 3467889999998 444455557889
Q ss_pred EEEEcCCCceeEE-eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE-EeecccCceEEEeeeC--cEEE
Q psy7482 209 TAYNLTDGSHLWQ-IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW-HIKASASRIKGLASHR--NHLI 284 (327)
Q Consensus 209 ~i~d~~~~~~~~~-~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~--~~l~ 284 (327)
..+|. +++.... ...+...+..+++ ++++.+.++....+.|.+||. +++... .+..+...+.++++++ .+.+
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~--d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v 245 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITS--GNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWF 245 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEE--CTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEE--CCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEE
Confidence 99998 5544321 2233446788888 478888777777788999998 554333 2333456788999998 5555
Q ss_pred EEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482 285 CITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 285 ~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~ 325 (327)
+...++.|..|+.. + .............+.++++.|+
T Consensus 246 ~~~~~~~i~~~~~~-g---~~~~~~~~~~~~~~~~i~~~~~ 282 (300)
T 2qc5_A 246 TEWGANQIGRITND-N---TIQEYQLQTENAEPHGITFGKD 282 (300)
T ss_dssp EETTTTEEEEECTT-S---CEEEEECCSTTCCCCCEEECTT
T ss_pred eccCCCeEEEECCC-C---cEEEEECCccCCccceeEeCCC
Confidence 54456889999983 3 2222222223345667777664
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.68 E-value=7.1e-13 Score=106.30 Aligned_cols=217 Identities=8% Similarity=0.106 Sum_probs=150.3
Q ss_pred ccEEEEEECCC-CCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCcee
Q psy7482 55 GTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (327)
Q Consensus 55 ~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 133 (327)
.-..+..|+|+ +.++++...++.|..||..+++.. .+ ..... +.+++++++++++++ . ++.|.+||.++++..
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~--~~~~~-~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV--TMDAP-VSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE--ECSSC-EEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE--eCCCc-eEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence 34567889995 456667777899999999877652 33 22344 999999999995554 4 567999999887654
Q ss_pred eeeeccccCccccceEEEEEccCCcEEEeec-C---------CeEEEEEecC-CceeeEecCCCceeEEEeecC-ce-EE
Q psy7482 134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q---------NKAVVFSVEK-AGVLQTLKSESKVHSVCFLNE-TT-VC 200 (327)
Q Consensus 134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---------~~i~i~d~~~-~~~~~~~~~~~~i~~~~~~~~-~~-l~ 200 (327)
........ .....+..++++|+|+++++.. . ..-.+|.+.. ++.............++|+|+ +. ++
T Consensus 87 ~~~~~~~~-~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 87 VLATVDND-KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEECCTT-CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred EEEecCCC-CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEE
Confidence 43332211 1123488999999999777653 1 2234444432 333333334456789999998 44 45
Q ss_pred EeCCCCcEEEEEc--CCCce-----eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCce
Q psy7482 201 TGNEESAITAYNL--TDGSH-----LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRI 273 (327)
Q Consensus 201 ~~~~d~~i~i~d~--~~~~~-----~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v 273 (327)
+.+.++.|..|++ .++.. ...+..+......+++ +++|++.++...++.|..||..+++.+..+..+...+
T Consensus 166 ~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~--d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~ 243 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCI--DAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKT 243 (297)
T ss_dssp EEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEE--BTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBE
T ss_pred ecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEE--CCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCc
Confidence 6667889999997 45543 2222333456778888 4899888887778899999999899999998887789
Q ss_pred EEEeee-C
Q psy7482 274 KGLASH-R 280 (327)
Q Consensus 274 ~~~~~~-~ 280 (327)
++++|. |
T Consensus 244 t~~~f~g~ 251 (297)
T 3g4e_A 244 TSCCFGGK 251 (297)
T ss_dssp EEEEEESG
T ss_pred eEEEEeCC
Confidence 999998 5
No 209
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.67 E-value=3e-13 Score=112.31 Aligned_cols=267 Identities=10% Similarity=0.126 Sum_probs=176.2
Q ss_pred EEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCC
Q psy7482 20 VAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT 99 (327)
Q Consensus 20 ~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 99 (327)
...++..++.++.++.|..+|..+++.+................ +..++.++.++.|..+|..+++............
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC---
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce
Confidence 34467778888889999999999998876655432211111222 4578888889999999999999887762221100
Q ss_pred ---ceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccc--cceEEEEEc---cCCcEEEeecCCeEEEE
Q psy7482 100 ---AVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGF--ENLDSVVWS---PEGLLYAIPIQNKAVVF 171 (327)
Q Consensus 100 ---~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~v~~~~~~---~~~~~l~~~~~~~i~i~ 171 (327)
........ +..++.+..++.+..+|..+++.............. ..+..+.-. .++.+++.+.++.+..+
T Consensus 177 ~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~ 254 (376)
T 3q7m_A 177 SLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTAL 254 (376)
T ss_dssp --CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEE
T ss_pred eecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEE
Confidence 00122222 446788888999999999999988776544321000 000001111 14445555558999999
Q ss_pred EecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee-cccceEEEEEEecCCCcEEEEecCCC
Q psy7482 172 SVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA-SASRIKGLVFFSIPQETTVCTGNEES 250 (327)
Q Consensus 172 d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~ 250 (327)
|.++++.+....... ...+... ++.+++++.++.+..+|..+++.+..... .......... .+..|+.++.+|
T Consensus 255 d~~tG~~~w~~~~~~-~~~~~~~-~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~----~~~~l~v~~~~g 328 (376)
T 3q7m_A 255 DLRSGQIMWKRELGS-VNDFIVD-GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL----YNGNLVVGDSEG 328 (376)
T ss_dssp ETTTCCEEEEECCCC-EEEEEEE-TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE----ETTEEEEECTTS
T ss_pred ECCCCcEEeeccCCC-CCCceEE-CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE----ECCEEEEEeCCC
Confidence 999999887766333 3344443 47788888899999999999998877652 2222333333 356788888899
Q ss_pred eEEEEEcCCCceeEEeecccCceEE-EeeeCcEEEEEecCCcEEEEE
Q psy7482 251 AITAYNLTDGSHLWHIKASASRIKG-LASHRNHLICITSAGDLVVWE 296 (327)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~v~iw~ 296 (327)
.+.++|..+++.+.........+.. .......|+.++.+|.|+.|+
T Consensus 329 ~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 329 YLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred eEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 9999999999998887764433332 333348888899999999886
No 210
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.67 E-value=5.7e-14 Score=114.39 Aligned_cols=264 Identities=14% Similarity=0.113 Sum_probs=180.7
Q ss_pred CccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482 14 TASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (327)
Q Consensus 14 ~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 92 (327)
...+.++.. .+..+..++.+ |..+|. +++....+...........+. +..|..++.++.|..+|.. ++.....
T Consensus 59 ~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~ 132 (330)
T 3hxj_A 59 EIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRF 132 (330)
T ss_dssp GEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEE
T ss_pred CCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEE
Confidence 344566666 35566666655 888886 676665555433323333333 4567778888999999988 7766665
Q ss_pred EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEE
Q psy7482 93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFS 172 (327)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d 172 (327)
...... +.++...+++. ++.++.++.|..+|.. ++.......... .+.++...+++.+++.+ +.+..+|
T Consensus 133 -~~~~~~-~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~-----~~~~~~~d~~g~l~v~t--~~l~~~d 201 (330)
T 3hxj_A 133 -KTKKAI-YATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDA-----ITSAASIGKDGTIYFGS--DKVYAIN 201 (330)
T ss_dssp -ECSSCC-CSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSC-----CCSCCEECTTCCEEEES--SSEEEEC
T ss_pred -cCCCce-eeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCC-----ceeeeEEcCCCEEEEEe--CEEEEEC
Confidence 333333 66677776776 6667788999999988 776655554322 26667777788776666 8899999
Q ss_pred ecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCe
Q psy7482 173 VEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESA 251 (327)
Q Consensus 173 ~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~ 251 (327)
.+++...... ....+.++...+++.+.+++.++.+..+| .+++.+..+......+..+.. ..+..|..++.+|.
T Consensus 202 -~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~---~~~g~l~v~t~~gg 276 (330)
T 3hxj_A 202 -PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVI---GNTDTIYFGSYDGH 276 (330)
T ss_dssp -TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCEE---CTTSCEEEECTTCE
T ss_pred -CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccceE---cCCCeEEEecCCCC
Confidence 7777776666 44567888888888888888888899997 456666666554444444554 33446777788889
Q ss_pred EEEEEcCCCceeEEeecccCceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482 252 ITAYNLTDGSHLWHIKASASRIKGLASHR-NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 252 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~ 300 (327)
|..+|. +++.+..+......+.++...+ ..|..++.+|.+++...+..
T Consensus 277 l~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 277 LYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp EEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC---
T ss_pred EEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEecccc
Confidence 999995 7777777776666677777756 77888999999999887665
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.66 E-value=6.9e-13 Score=110.98 Aligned_cols=232 Identities=11% Similarity=0.065 Sum_probs=157.5
Q ss_pred ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CEEEEEcCCCce
Q psy7482 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRS 132 (327)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~ 132 (327)
.....++|+++++++++...++.|+.||..+++..... .. ... .. ++|+++++.|+++..++ .|..++...+..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~-~~-~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH-PG-FKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE-ET-CCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee-cc-CCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 35789999999998888777899999999887776555 33 222 34 99999999999888766 788888776544
Q ss_pred eeee-eccccCccccceEEEEEcc-CCcEEEeecCCeEEEEEecCCceeeE----ecCC-Cc-ee-EEEeecC-c-eEEE
Q psy7482 133 AYIT-NLSSYGVGFENLDSVVWSP-EGLLYAIPIQNKAVVFSVEKAGVLQT----LKSE-SK-VH-SVCFLNE-T-TVCT 201 (327)
Q Consensus 133 ~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~i~i~d~~~~~~~~~----~~~~-~~-i~-~~~~~~~-~-~l~~ 201 (327)
.... .... .....+.+++++| ++.++++..++.|+.||..++..... .... .. .. .++|+|+ + ++++
T Consensus 207 ~~~~g~~~~--~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 207 PTRIGQLGS--TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp EEEEEECCT--TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred eEEeeeccc--hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 3222 1111 0123378899999 55555533478999999987653322 1111 11 13 9999994 5 4555
Q ss_pred eCCCCcEEEEEcCCCceeEEeeecc---------------cceEEEEEEecCCCcEEEEec-CCCeEEEEEcCCCceeEE
Q psy7482 202 GNEESAITAYNLTDGSHLWQIKASA---------------SRIKGLVFFSIPQETTVCTGN-EESAITAYNLTDGSHLWH 265 (327)
Q Consensus 202 ~~~d~~i~i~d~~~~~~~~~~~~~~---------------~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~ 265 (327)
...++.|+.|+.... +..+.++. .....+++ +++|+++++-. .++.|+.|++.+++. ..
T Consensus 285 d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~--d~dG~lyvad~~~~~~I~~~~~~~G~v-~~ 359 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTV--DEDGNFYIVDGFKGYCLRKLDILDGYV-ST 359 (409)
T ss_dssp ETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEE--CTTCCEEEEETTTTCEEEEEETTTTEE-EE
T ss_pred eCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEE--eCCCCEEEEeCCCCCEEEEEECCCCEE-EE
Confidence 667889999987543 33333332 34678888 48999888877 889999999877763 44
Q ss_pred eecc---------------cCceEEEeeeC--cEEEEEecCCcEEEEEc
Q psy7482 266 IKAS---------------ASRIKGLASHR--NHLICITSAGDLVVWEL 297 (327)
Q Consensus 266 ~~~~---------------~~~v~~~~~~~--~~l~~~~~dg~v~iw~~ 297 (327)
+.++ -.....+++++ .++++-..++.|+.+++
T Consensus 360 ~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 360 VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 4433 23578888888 55555556667777665
No 212
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.65 E-value=1.3e-13 Score=112.71 Aligned_cols=273 Identities=10% Similarity=-0.032 Sum_probs=181.8
Q ss_pred EEEEecCCC----eEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCCCeEEEe
Q psy7482 26 LAASSGADE----TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSWQLEKL 91 (327)
Q Consensus 26 ~l~~~~~dg----~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~ 91 (327)
.+++...++ .|.+.|..+++.+.++.....+ .+.++||+++++++. .++.|.+||..+++.+..
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 444444444 8889999999999988765566 799999999998886 367899999999999999
Q ss_pred EEeccc-----CCceeeEEEecCCCEEEEEeC--CCCEEE--EEcCCCceeeeeeccccCccccceEEEEEccCCc--EE
Q psy7482 92 FKKAHK-----GTAVNHISIHPSGKLALSVGK--DKTLRT--WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL--LY 160 (327)
Q Consensus 92 ~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l 160 (327)
+..+.. ......+.++|||++++++.. +..+.+ +|+.+ ...+..... ....|+++ ++
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~---------~~~~p~g~~~~~ 179 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC---------FHIHPGAAATHY 179 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC---------CCCEEEETTEEE
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc---------eEEccCCCeEEE
Confidence 843311 112678999999999998875 356888 99876 333333211 11234442 33
Q ss_pred EeecCCeEEEEEecC-----Cceee----Eec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc--eeEEeeec--
Q psy7482 161 AIPIQNKAVVFSVEK-----AGVLQ----TLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS--HLWQIKAS-- 225 (327)
Q Consensus 161 ~~~~~~~i~i~d~~~-----~~~~~----~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~-- 225 (327)
+.+.|+.+.+.|+.+ ++... .+. ...+. . .++ +.++..+. +.+.+.|+.... .+..+...
T Consensus 180 ~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~ 254 (368)
T 1mda_H 180 LGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNES 254 (368)
T ss_dssp CCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCT
T ss_pred EEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccc
Confidence 333478888888876 43321 111 22333 3 454 55555555 999999986542 22222110
Q ss_pred --------ccceEEEEEEecCCCcEEEEecC---------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--c-EEEE
Q psy7482 226 --------ASRIKGLVFFSIPQETTVCTGNE---------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--N-HLIC 285 (327)
Q Consensus 226 --------~~~v~~~~~~~s~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~ 285 (327)
......+++. ++++.++.+.. ++.+.++|+.+.+.+..+.... ....++|+| + ++++
T Consensus 255 ~~~~~~~~p~g~~~v~~s--~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va 331 (368)
T 1mda_H 255 GRKADNFRSAGFQMVAKL--KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYA 331 (368)
T ss_dssp HHHHTTEEECSSSCEEEE--TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEE
T ss_pred cccccccccCcceeeEEc--CCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEE
Confidence 0111225674 88888776532 2356699999999988887554 678999998 4 5666
Q ss_pred Ee-cCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482 286 IT-SAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 286 ~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~ 325 (327)
.. .++.|.++|+.+. +.+.....+.....+++.+.
T Consensus 332 ~~~~~~~VsVID~~t~-----kvv~~I~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 332 NSAGTEVLDIYDAASD-----QDQSSVELDKGPESLSVQNE 367 (368)
T ss_dssp EETTTTEEEEEESSSC-----EEEEECCCCSCCCEEECCCC
T ss_pred ccCCCCeEEEEECCCC-----cEEEEEECCCCCCEEEeecC
Confidence 66 5999999999988 55555566666777777664
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.64 E-value=1.7e-12 Score=108.57 Aligned_cols=236 Identities=11% Similarity=0.090 Sum_probs=158.2
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCC--cEEEEEcCCCeEEE
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVGSWQLEK 90 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~ 90 (327)
.....|++ +++++++...++.|++||..+++......... ... ++|+|+++.|+++..++ .|.+++...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 46778888 67777777778999999998776654444322 233 99999999998888766 78888887654332
Q ss_pred eEE--ec-ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccC-ccccceEEEEEccC-CcEEEeec-
Q psy7482 91 LFK--KA-HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYG-VGFENLDSVVWSPE-GLLYAIPI- 164 (327)
Q Consensus 91 ~~~--~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~- 164 (327)
.+. .. .... +.+++++|++..|+.+..++.|+.||..++............ ....+...++|+|+ +.++++..
T Consensus 209 ~~g~~~~~~~~~-p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 209 RIGQLGSTFSGK-IGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEECCTTSCSC-CCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EeeeccchhcCC-cEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 220 12 2333 789999995556666777889999999877543221111111 11111238999995 55555554
Q ss_pred CCeEEEEEecCCceeeEecC---------------CCceeEEEeecC-ceEEEeC-CCCcEEEEEcCCCceeEEeeec--
Q psy7482 165 QNKAVVFSVEKAGVLQTLKS---------------ESKVHSVCFLNE-TTVCTGN-EESAITAYNLTDGSHLWQIKAS-- 225 (327)
Q Consensus 165 ~~~i~i~d~~~~~~~~~~~~---------------~~~i~~~~~~~~-~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-- 225 (327)
++.|+.|+.... ....... -.....++++|+ .++++-. .++.|+.|++.++. +.++.++
T Consensus 288 ~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~ 365 (409)
T 3hrp_A 288 LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVD 365 (409)
T ss_dssp TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECTT
T ss_pred CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCC
Confidence 789999987543 2222222 134789999999 5566666 78999999987775 4444443
Q ss_pred -------------ccceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482 226 -------------ASRIKGLVFFSIPQETTVCTGNEESAITAYNL 257 (327)
Q Consensus 226 -------------~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~ 257 (327)
-.....+++. +++.++++-..++.|+.+++
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd--~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYD--GEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEEC--SSSEEEEEESTTCEEEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEc--CCCCEEEEECCCCeEEEEEe
Confidence 2357788884 78888888888888888765
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.64 E-value=2.7e-12 Score=104.26 Aligned_cols=219 Identities=15% Similarity=0.127 Sum_probs=147.4
Q ss_pred EEEEEECCCC-CeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeee
Q psy7482 57 ITCLKFTPEG-SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (327)
Q Consensus 57 v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 135 (327)
.....|+|++ .++++...++.|..||..+++.. .+ . .... +.++.++++++++++. .+ .|.+||..+++....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~-~~~~-v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VH-A-LPFM-GSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EE-E-CSSC-EEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EE-E-CCCc-ceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEE
Confidence 4567899974 45667777889999999887653 23 1 2334 9999999999876654 44 499999988775433
Q ss_pred eeccccCccccceEEEEEccCCcEEEeecC-------CeEEEEEecCCceeeEecCCCceeEEEeecC-ceE-EEeCCCC
Q psy7482 136 TNLSSYGVGFENLDSVVWSPEGLLYAIPIQ-------NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTV-CTGNEES 206 (327)
Q Consensus 136 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l-~~~~~d~ 206 (327)
..... ......+..+.++|+|+++++..+ +.|..++ +++.............++|+|+ +.+ ++.+.++
T Consensus 125 ~~~~~-~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 125 AELES-DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp ECSST-TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTC
T ss_pred eeCCC-CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCC
Confidence 22211 111234889999999997776532 4566666 4544333333345778999998 444 4556678
Q ss_pred cEEEEEcC--CC-ce-----eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482 207 AITAYNLT--DG-SH-----LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS 278 (327)
Q Consensus 207 ~i~i~d~~--~~-~~-----~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 278 (327)
.|.+||+. ++ +. ...+.........+++ +++|.+.++...++.|.+||. +++.+..+..+...+++++|
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~--d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVC--DAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAF 278 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEE--CTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEE
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEE--CCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEE
Confidence 99999986 55 32 2222223345667777 488887777666789999998 67777778777778999999
Q ss_pred e-C--cEEEEEe
Q psy7482 279 H-R--NHLICIT 287 (327)
Q Consensus 279 ~-~--~~l~~~~ 287 (327)
. + +.|+.++
T Consensus 279 ~g~d~~~L~vt~ 290 (326)
T 2ghs_A 279 IGPDASRLLVTS 290 (326)
T ss_dssp ESTTSCEEEEEE
T ss_pred ecCCCCEEEEEe
Confidence 8 5 4454444
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.63 E-value=2.4e-12 Score=103.23 Aligned_cols=223 Identities=10% Similarity=0.123 Sum_probs=148.7
Q ss_pred CCccEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482 13 HTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (327)
Q Consensus 13 h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~ 89 (327)
+..---+..| ++.++++...++.|..||..+++.. .+ .....+.+++++|+|+++++ . ++.|.+||.++++..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence 3444556777 4567777778899999999876542 23 24567999999999995554 4 567999999887764
Q ss_pred EeEEecc---cCCceeeEEEecCCCEEEEEeCC---------CCEEEEEcCC-CceeeeeeccccCccccceEEEEEccC
Q psy7482 90 KLFKKAH---KGTAVNHISIHPSGKLALSVGKD---------KTLRTWNLVK-GRSAYITNLSSYGVGFENLDSVVWSPE 156 (327)
Q Consensus 90 ~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~ 156 (327)
... ... ....++.++++|+|+++++...+ ..-.+|.+.. ++........ .....++|+|+
T Consensus 87 ~~~-~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~------~~pngi~~spd 159 (297)
T 3g4e_A 87 VLA-TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV------DISNGLDWSLD 159 (297)
T ss_dssp EEE-ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE------SBEEEEEECTT
T ss_pred EEE-ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc------ccccceEEcCC
Confidence 433 221 11237889999999966654321 2334555443 3322221111 22678999999
Q ss_pred CcEEEee-c-CCeEEEEEe--cCCcee-----eEec-CCCceeEEEeecCceEE-EeCCCCcEEEEEcCCCceeEEeeec
Q psy7482 157 GLLYAIP-I-QNKAVVFSV--EKAGVL-----QTLK-SESKVHSVCFLNETTVC-TGNEESAITAYNLTDGSHLWQIKAS 225 (327)
Q Consensus 157 ~~~l~~~-~-~~~i~i~d~--~~~~~~-----~~~~-~~~~i~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~ 225 (327)
++.+..+ + ++.|..||+ .++... ..+. ....+..+++++++.+. +....+.|..||..+++.+..+..+
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 9866554 4 789999997 445431 1222 34568899999985544 4456778999999989998888877
Q ss_pred ccceEEEEEEecCCCcEEEEec
Q psy7482 226 ASRIKGLVFFSIPQETTVCTGN 247 (327)
Q Consensus 226 ~~~v~~~~~~~s~~~~~l~~~~ 247 (327)
...+++++|.. |+++.|+.++
T Consensus 240 ~~~~t~~~f~g-~d~~~L~vt~ 260 (297)
T 3g4e_A 240 VDKTTSCCFGG-KNYSEMYVTC 260 (297)
T ss_dssp SSBEEEEEEES-GGGCEEEEEE
T ss_pred CCCceEEEEeC-CCCCEEEEEc
Confidence 77899999952 6766655443
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.63 E-value=7.1e-14 Score=114.52 Aligned_cols=167 Identities=10% Similarity=0.104 Sum_probs=124.2
Q ss_pred cEEEEEe--CCCEEEEecCCCeEEEEEcccccc---------cc-ccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482 16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQ---------SG-ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (327)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~---------~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~ 83 (327)
+++.+++ ...++++|+.++ +++|++++.+. .. ....+.. |+.++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 4777777 788888888775 66799775541 11 2223566 999999 89999998 8899999999
Q ss_pred CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482 84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP 163 (327)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 163 (327)
.+....... ..+... +.++.+.+. .+++++.||.|.+||+.++.... .. ..|.+++|+|+| +.+..
T Consensus 114 ~sl~~~~~~-~~~~~~-v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~------~~Vs~v~WSpkG-~~vg~ 179 (388)
T 1xip_A 114 EELSEFRTV-TSFEKP-VFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LA------QNVTSFDVTNSQ-LAVLL 179 (388)
T ss_dssp SSTTCEEEE-EECSSC-EEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EE------ESEEEEEECSSE-EEEEE
T ss_pred hhhhccCcc-ceeecc-eeeEEecCC--CEEEEECCCCEEEEEccCCcccc---cc------CCceEEEEcCCc-eEEEE
Confidence 876655544 555555 888777654 38889999999999999777542 22 239999999999 44444
Q ss_pred cCCeEEEEEecCCce--eeEe------c----CCCceeEEEeecCc-eEEE
Q psy7482 164 IQNKAVVFSVEKAGV--LQTL------K----SESKVHSVCFLNET-TVCT 201 (327)
Q Consensus 164 ~~~~i~i~d~~~~~~--~~~~------~----~~~~i~~~~~~~~~-~l~~ 201 (327)
.||.+++|+...++. ...+ . +...|.++.|.+++ ++++
T Consensus 180 ~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 180 KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 599999999887775 5555 2 56789999999984 4443
No 217
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.63 E-value=2.9e-18 Score=141.77 Aligned_cols=259 Identities=10% Similarity=0.041 Sum_probs=148.9
Q ss_pred eCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCce
Q psy7482 22 ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV 101 (327)
Q Consensus 22 ~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v 101 (327)
.++..+++++.||.|+.||..+|+.+..+.. +.+.+..+..++..+++++.||.|+.||.++++.+..+ ..+....+
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~-~~~~~~~~ 83 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL-PFTIPELV 83 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEEC-SCCHHHHH
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee-eccCcccc
Confidence 3788999999999999999999999887775 45555555667878888899999999999988876655 22211101
Q ss_pred ee-EEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCcee
Q psy7482 102 NH-ISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVL 179 (327)
Q Consensus 102 ~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~ 179 (327)
.+ ..+. .+..+++++.++.++.||.++|+....+.... ...++|++..+++++ ++.++.||.++++.+
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---------ADSLSPSTSLLYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---------cccccccCCEEEEEecCCEEEEEECCCCCEE
Confidence 11 1111 34567788889999999999998876654332 123456666666665 899999999999887
Q ss_pred eEecCCCceeEEEeecC----ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE----EEecCCCe
Q psy7482 180 QTLKSESKVHSVCFLNE----TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV----CTGNEESA 251 (327)
Q Consensus 180 ~~~~~~~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l----~~~~~d~~ 251 (327)
..+.... .....+.++ +.+++++.+|.++.||.++++.+.++.. ..++..+-.. ++++... ..+ ++.
T Consensus 154 W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~-~~dg~~~v~~~~~~--~~~ 228 (369)
T 2hz6_A 154 WNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVW-QREGLRKVMHINVA--VET 228 (369)
T ss_dssp CEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEEC-TTSSCEEECCEEEE--HHH
T ss_pred EeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEe-cCCceEeccceeec--ccc
Confidence 7665211 122233332 5688889999999999999999888763 3344432221 2444321 112 345
Q ss_pred EEEEEcCCCc----eeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEccC
Q psy7482 252 ITAYNLTDGS----HLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNE 299 (327)
Q Consensus 252 i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~ 299 (327)
++.+|..+|+ .++.+.... .+.+.......|+.++.||.++.++...
T Consensus 229 l~~ld~~tG~~~~~~~W~~~~~~-~~~sp~~~~g~lyv~~~~G~l~al~~~~ 279 (369)
T 2hz6_A 229 LRYLTFMSGEVGRITKWKYPFPK-ETEAKSKLTPTLYVGKYSTSLYASPSMV 279 (369)
T ss_dssp HHHHHHHHHHHHHHHTSCCCCCC-HHHHHHHSEEEECBEECSSCEECCEEEE
T ss_pred eeeeehhcCCcccceeeeeccCc-cccccccccceEEEecccCCEEecCccc
Confidence 6677776776 555554322 2211111117888899999999988863
No 218
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.63 E-value=6.1e-13 Score=118.50 Aligned_cols=264 Identities=11% Similarity=0.117 Sum_probs=173.3
Q ss_pred EeCCCEEEEecCCCeEEEEEccccccccccccc--cccEEEEEECC---CCCeEEEec------CCCcEEEEEcCCCeEE
Q psy7482 21 AATSKLAASSGADETVVLYDMVKRKQSGALMQH--EGTITCLKFTP---EGSHLISCS------DDGSIAIFRVGSWQLE 89 (327)
Q Consensus 21 ~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~--~~~v~~~~~~~---~~~~l~~~~------~d~~i~iw~~~~~~~~ 89 (327)
+..+..++.++.|+.|..+|..+|+.+..+... ......+..+| ++ .+++++ .++.|..||.++|+.+
T Consensus 118 ~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 118 AVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 345667888889999999999999988665532 11111111122 44 444443 3689999999999988
Q ss_pred EeEEeccc-----------------------------CCceeeEEEecCCCEEEEEeCCCC-------------------
Q psy7482 90 KLFKKAHK-----------------------------GTAVNHISIHPSGKLALSVGKDKT------------------- 121 (327)
Q Consensus 90 ~~~~~~~~-----------------------------~~~v~~~~~~~~~~~l~~~~~dg~------------------- 121 (327)
..+..... ......++++|++.+++.+..++.
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 77732110 010125788888888998887763
Q ss_pred EEEEEcCCCceeeeeeccccCc----cccceEEEEEccCCc---EEEeec-CCeEEEEEecCCceeeEecCCC-------
Q psy7482 122 LRTWNLVKGRSAYITNLSSYGV----GFENLDSVVWSPEGL---LYAIPI-QNKAVVFSVEKAGVLQTLKSES------- 186 (327)
Q Consensus 122 i~iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~---~l~~~~-~~~i~i~d~~~~~~~~~~~~~~------- 186 (327)
|..+|.++|+.+..+....+.. ...+........+|+ .++.++ +|.++++|.++++.+...+...
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence 9999999999988776543210 011122222233554 566666 8999999999999875433110
Q ss_pred ---------------------------------ceeEEEeecC-ceEEEeCC----------------------------
Q psy7482 187 ---------------------------------KVHSVCFLNE-TTVCTGNE---------------------------- 204 (327)
Q Consensus 187 ---------------------------------~i~~~~~~~~-~~l~~~~~---------------------------- 204 (327)
.-..++++|+ +++++...
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 0112678887 66665421
Q ss_pred -----------------CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee
Q psy7482 205 -----------------ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK 267 (327)
Q Consensus 205 -----------------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 267 (327)
+|.|..||+.+++.+.+++.+.. ...-.+. ..+.+++.++.|+.++.||.++|+.+++++
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~--tagglvf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI-FNGGTLS--TAGNLVFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS-CCCCEEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC-ccCccce--ECCCEEEEECCCCcEEEEECCCCccceeee
Confidence 37899999999999988876543 3332342 577888999999999999999999999998
Q ss_pred cccCce-EEEeeeC---cEEEEEec
Q psy7482 268 ASASRI-KGLASHR---NHLICITS 288 (327)
Q Consensus 268 ~~~~~v-~~~~~~~---~~l~~~~~ 288 (327)
...+.+ .-+.|.. .++++.+.
T Consensus 514 ~~~~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 514 AASGVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp CSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCCCcccCceEEEECCEEEEEEEec
Confidence 654322 3355533 56665543
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.62 E-value=1.1e-12 Score=105.52 Aligned_cols=224 Identities=8% Similarity=0.081 Sum_probs=152.2
Q ss_pred CCccEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482 13 HTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (327)
Q Consensus 13 h~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~ 89 (327)
+........| +++ +++++..++.|..|+. +++ ...+..+...+..+++.++|+++++...++.|..|+.. ++..
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH 119 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE
Confidence 4455667777 677 6778888899999997 444 34455566778999999999977766666889999986 5543
Q ss_pred EeEE--ecccCCceeeEEEecCCCEEEE----EeC-------------CCCEEEEEcCCCceeeeeeccccCccccceEE
Q psy7482 90 KLFK--KAHKGTAVNHISIHPSGKLALS----VGK-------------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDS 150 (327)
Q Consensus 90 ~~~~--~~~~~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 150 (327)
.... .......+..+++.++|++.++ |.. .+.|..+|..+++..... . ......
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~-----~~~p~g 192 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D-----LDHPNG 192 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E-----ESSEEE
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c-----CCCCcc
Confidence 2221 1111122778999999998776 321 245777887666654332 1 122778
Q ss_pred EEEccCCcEEEeec-C------CeEEEEEecCCcee--eEec--CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCcee
Q psy7482 151 VVWSPEGLLYAIPI-Q------NKAVVFSVEKAGVL--QTLK--SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHL 219 (327)
Q Consensus 151 ~~~~~~~~~l~~~~-~------~~i~i~d~~~~~~~--~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 219 (327)
++|+|+++.|.++. . +.|.+|++..+... ..+. ....+..+++++++.+.++..+ .|.+|+. +++.+
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~-gv~~~~~-~g~~~ 270 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT-GVCVFDS-DGQLL 270 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS-EEEEECT-TSCEE
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC-cEEEECC-CCCEE
Confidence 99999998766654 3 68999998765411 1111 2345667889998777777755 4999997 57777
Q ss_pred EEeeecccceEEEEEEecCCCcEEEEecCCCe
Q psy7482 220 WQIKASASRIKGLVFFSIPQETTVCTGNEESA 251 (327)
Q Consensus 220 ~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~ 251 (327)
..+..+. .+..++|. ++++.|..++.++.
T Consensus 271 ~~~~~~~-~~~~~~f~--~d~~~L~it~~~~l 299 (305)
T 3dr2_A 271 GHIPTPG-TASNCTFD--QAQQRLFITGGPCL 299 (305)
T ss_dssp EEEECSS-CCCEEEEC--TTSCEEEEEETTEE
T ss_pred EEEECCC-ceeEEEEe--CCCCEEEEEcCCeE
Confidence 7776555 57888984 88888887776543
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.62 E-value=9.6e-13 Score=105.98 Aligned_cols=231 Identities=10% Similarity=0.109 Sum_probs=151.9
Q ss_pred ccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEE
Q psy7482 47 SGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125 (327)
Q Consensus 47 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 125 (327)
+..+...........|+|+++ ++++...++.|..|+. +++. ..+ ...... +..++++++|+++++...++.|..|
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~-~~~~~~-~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVL-LDATAF-TNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEE-EESCSC-EEEEEECTTSCEEEEETTTTEEEEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEE-eCCCCc-cceeeECCCCCEEEEECCCCEEEEE
Confidence 333444455677899999998 6677778899999998 4543 344 334445 8999999999866665556789999
Q ss_pred EcCCCceeeeeeccccCccccceEEEEEccCCcEEEe----ec--------------CCeEEEEEecCCceeeEecCCCc
Q psy7482 126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI----PI--------------QNKAVVFSVEKAGVLQTLKSESK 187 (327)
Q Consensus 126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~--------------~~~i~i~d~~~~~~~~~~~~~~~ 187 (327)
+.. ++........ .......+..++++|+|+++++ +. .+.|..+|..+++..... ....
T Consensus 113 ~~~-g~~~~~~~~~-~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~ 189 (305)
T 3dr2_A 113 DAD-GQAHLLVGRY-AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH 189 (305)
T ss_dssp CTT-SCEEEEECEE-TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS
T ss_pred CCC-CCEEEEEecc-CCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC
Confidence 976 5533222111 1111223778999999998885 32 256788887666654443 4456
Q ss_pred eeEEEeecC-ceEEEeCCC------CcEEEEEcCCCceeEE---e-eecccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482 188 VHSVCFLNE-TTVCTGNEE------SAITAYNLTDGSHLWQ---I-KASASRIKGLVFFSIPQETTVCTGNEESAITAYN 256 (327)
Q Consensus 188 i~~~~~~~~-~~l~~~~~d------~~i~i~d~~~~~~~~~---~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d 256 (327)
...++|+|+ ..|+++... +.|.+|++..+. +.. + .........+++ +++|++. +++.+ .|.+|+
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~--d~~G~lw-v~~~~-gv~~~~ 264 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCV--DRGGWLW-SSSGT-GVCVFD 264 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEE--CTTSCEE-ECCSS-EEEEEC
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEE--CCCCCEE-EecCC-cEEEEC
Confidence 788999999 556665544 789999987554 211 1 112233456777 4888844 44444 599999
Q ss_pred cCCCceeEEeecccCceEEEeeeC--cEEEEEecCCc
Q psy7482 257 LTDGSHLWHIKASASRIKGLASHR--NHLICITSAGD 291 (327)
Q Consensus 257 ~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~ 291 (327)
. +++.+..+..+. .+.+++|.+ +.|+.++.++.
T Consensus 265 ~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 265 S-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp T-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred C-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 7 677777777655 588899987 56776666543
No 221
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.61 E-value=7.6e-13 Score=117.87 Aligned_cols=272 Identities=10% Similarity=0.083 Sum_probs=178.1
Q ss_pred CCCEEEEecCCCeEEEEEcccccccccccccccc----------E-EEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT----------I-TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 91 (327)
.+..+++++.++.|..+|..+|+.+..+...... + ..++. .+..+++++.|+.|..+|.++|+.+..
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee
Confidence 4566777777899999999999988776532210 0 11122 356788899999999999999999887
Q ss_pred EEec-ccCC--ceeeEEEecCCCEEEEEe------CCCCEEEEEcCCCceeeeeeccccC--------------------
Q psy7482 92 FKKA-HKGT--AVNHISIHPSGKLALSVG------KDKTLRTWNLVKGRSAYITNLSSYG-------------------- 142 (327)
Q Consensus 92 ~~~~-~~~~--~v~~~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~-------------------- 142 (327)
+... +... .+.+.-.-.++ .++.+. .+|.|..||.++|+.+..+......
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred ecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 7432 2111 01111111144 444443 3689999999999988776532100
Q ss_pred ------ccccceEEEEEccCCcEEEeec-CC-------------------eEEEEEecCCceeeEecC--C--------C
Q psy7482 143 ------VGFENLDSVVWSPEGLLYAIPI-QN-------------------KAVVFSVEKAGVLQTLKS--E--------S 186 (327)
Q Consensus 143 ------~~~~~v~~~~~~~~~~~l~~~~-~~-------------------~i~i~d~~~~~~~~~~~~--~--------~ 186 (327)
.+......++++|++.++..+. ++ .|..+|.++++.+..++. . .
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 0000113578888888887776 54 499999999999988762 1 1
Q ss_pred ceeEEEeecC----ceEEEeCCCCcEEEEEcCCCceeEEeeeccc-c---------------------------------
Q psy7482 187 KVHSVCFLNE----TTVCTGNEESAITAYNLTDGSHLWQIKASAS-R--------------------------------- 228 (327)
Q Consensus 187 ~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~--------------------------------- 228 (327)
++.......+ ..++.++.+|.++++|.++++.+...+.... .
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~ 385 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF 385 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence 1211222223 2688999999999999999998754321110 0
Q ss_pred -----eEEEEEEecCCCcEEEEecC---------------------------------------------CCeEEEEEcC
Q psy7482 229 -----IKGLVFFSIPQETTVCTGNE---------------------------------------------ESAITAYNLT 258 (327)
Q Consensus 229 -----v~~~~~~~s~~~~~l~~~~~---------------------------------------------d~~i~i~d~~ 258 (327)
-..+++. |+..++++... +|.|..||+.
T Consensus 386 ~Gg~~w~~~a~d--p~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~ 463 (689)
T 1yiq_A 386 WGAHDWQPMSYN--PDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV 463 (689)
T ss_dssp TCSSCSSCCEEE--TTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT
T ss_pred ccccCCCcceEC--CCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC
Confidence 0124563 66666665421 4789999999
Q ss_pred CCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 259 DGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 259 ~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
+++.++++..+.. ...-.+.. .+++.++.||.|+.||..++
T Consensus 464 tG~~~W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG 506 (689)
T 1yiq_A 464 KQQAAWEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTG 506 (689)
T ss_dssp TTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CCCeEeEccCCCC-ccCccceECCCEEEEECCCCcEEEEECCCC
Confidence 9999999876653 33223332 89999999999999999998
No 222
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.60 E-value=1.4e-11 Score=101.76 Aligned_cols=248 Identities=9% Similarity=-0.063 Sum_probs=161.8
Q ss_pred ECCCCCeEEEecC--CC---cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEe----------CCCCEEEEE
Q psy7482 62 FTPEGSHLISCSD--DG---SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG----------KDKTLRTWN 126 (327)
Q Consensus 62 ~~~~~~~l~~~~~--d~---~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iwd 126 (327)
..|+++++++... .. .|.++|..+++.+..+..+ .. . .+.++||++.++.+. .++.|.+||
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g--~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG--FL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC--CC-C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 4467777776653 22 7899999999988877332 22 3 899999999999886 367899999
Q ss_pred cCCCceeeeeeccc-c-CccccceEEEEEccCCcEEEeec---CCeEEEEEecCCceeeE-ecCCCceeEEEeecC--ce
Q psy7482 127 LVKGRSAYITNLSS-Y-GVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVLQT-LKSESKVHSVCFLNE--TT 198 (327)
Q Consensus 127 ~~~~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~~~-~~~~~~i~~~~~~~~--~~ 198 (327)
..+.+....+.... . .........+.|+|+|++++++. ++.|.++| .+++.+.. +..... +.+.|+ ..
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~ 179 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPST 179 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCce
Confidence 99888777665541 1 00011256899999999888874 47899999 99998888 764443 334454 46
Q ss_pred EEEeCCCCcEEEEEcCCCceeEEee-----ecccce-EEEEEEecCCCcEEEEecCCCeEEEEEcCCCc--eeEEeecc-
Q psy7482 199 VCTGNEESAITAYNLTDGSHLWQIK-----ASASRI-KGLVFFSIPQETTVCTGNEESAITAYNLTDGS--HLWHIKAS- 269 (327)
Q Consensus 199 l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~v-~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~- 269 (327)
+++.+.||.+.++|. +++...... ....++ ....+. +++..++..+.++.+.+.|+.... .+..+...
T Consensus 180 ~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 180 FYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA--NKSGRIVWPVYSGKILQADISAAGATNKAPIDALS 256 (373)
T ss_pred EEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeE--ecCCEEEEEcCCceEEEEeccCCcceEeeeeeecC
Confidence 677788999999999 777663322 111221 223343 444444444467899999987653 22222211
Q ss_pred ---------cCceEEEeeeC--cEEEEEec----------CCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482 270 ---------ASRIKGLASHR--NHLICITS----------AGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 270 ---------~~~v~~~~~~~--~~l~~~~~----------dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~ 325 (327)
......+++++ +.++.+.. ++.|.++|..+. +.+.....+....+++|+|+
T Consensus 257 ~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~-----~vv~~i~~g~~p~~i~~s~D 328 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG-----QTSSQISLGHDVDAISVAQD 328 (373)
T ss_pred CcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC-----EEEEEEECCCCcCeEEECCC
Confidence 12233467777 55555432 357999998877 33333344556889999987
No 223
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.59 E-value=1.3e-13 Score=112.22 Aligned_cols=256 Identities=14% Similarity=0.136 Sum_probs=175.0
Q ss_pred EEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEeccc
Q psy7482 19 SVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHK 97 (327)
Q Consensus 19 ~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~ 97 (327)
+... .+..+..++.++.|..|| .+++.......+...+.++...+++. |..++.+ |..+|. +++....+ ....
T Consensus 24 ~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~-~~~~ 97 (330)
T 3hxj_A 24 SPILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRF-DTKK 97 (330)
T ss_dssp CCEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGS-CC--
T ss_pred CceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEE-ECCC
Confidence 3444 456677788888999999 88887766665555667777777665 5555555 888885 55544433 1111
Q ss_pred CCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCc
Q psy7482 98 GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG 177 (327)
Q Consensus 98 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~ 177 (327)
.. .....+. +..+..++.++.|..+|.. ++.......... .+.++...+++.+++...++.+..+|.. ++
T Consensus 98 ~~-~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~-----~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~ 167 (330)
T 3hxj_A 98 AI-VSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKA-----IYATPIVSEDGTIYVGSNDNYLYAINPD-GT 167 (330)
T ss_dssp ----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSC-----CCSCCEECTTSCEEEECTTSEEEEECTT-SC
T ss_pred Cc-ccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCc-----eeeeeEEcCCCEEEEEcCCCEEEEECCC-CC
Confidence 11 3333343 4567788888999999988 776555543322 2556677778887766668999999998 77
Q ss_pred eeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482 178 VLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYN 256 (327)
Q Consensus 178 ~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d 256 (327)
....+. ....+.++...+++.+.+++ +.+..+| .+++.+..+......+.++.. +++| .+..++.++.+..+|
T Consensus 168 ~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~--~~~g-~l~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 168 EKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAI--SEDG-TIYVTSLDGHLYAIN 241 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEE--CTTS-CEEEEETTTEEEEEC
T ss_pred EeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEE--CCCC-eEEEEcCCCeEEEEC
Confidence 776666 44556677777777777777 8899999 778777777655566777777 2555 455566678888887
Q ss_pred cCCCceeEEeecccCceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482 257 LTDGSHLWHIKASASRIKGLASHR-NHLICITSAGDLVVWEL 297 (327)
Q Consensus 257 ~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~ 297 (327)
.+++.+..+......+..+...+ ..|..++.+|.|..+|.
T Consensus 242 -~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 242 -PDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp -TTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred -CCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC
Confidence 46777777765554455566665 78888888988999985
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.59 E-value=3.2e-12 Score=113.63 Aligned_cols=276 Identities=11% Similarity=0.086 Sum_probs=184.3
Q ss_pred EEeCCCEEEEecCCCeEEEEEccccccccccccc-c----ccEEE-EEECCCCCeEEEecC------CCcEEEEEcCCCe
Q psy7482 20 VAATSKLAASSGADETVVLYDMVKRKQSGALMQH-E----GTITC-LKFTPEGSHLISCSD------DGSIAIFRVGSWQ 87 (327)
Q Consensus 20 ~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~-~----~~v~~-~~~~~~~~~l~~~~~------d~~i~iw~~~~~~ 87 (327)
+++++..|+.++.|+.|..+|..+|+.+..+..+ . ..+.+ ... .+..+++++. ++.|+.+|..+|+
T Consensus 124 ~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~ 201 (677)
T 1kb0_A 124 VALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGE 201 (677)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred ceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCc
Confidence 4446677888888999999999999988776643 1 11111 111 2345555553 6899999999999
Q ss_pred EEEeEEecccC------------------------------CceeeEEEecCCCEEEEEeCCC-----------------
Q psy7482 88 LEKLFKKAHKG------------------------------TAVNHISIHPSGKLALSVGKDK----------------- 120 (327)
Q Consensus 88 ~~~~~~~~~~~------------------------------~~v~~~~~~~~~~~l~~~~~dg----------------- 120 (327)
.+..+...... .....+++++++..++.+..++
T Consensus 202 ~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~ 281 (677)
T 1kb0_A 202 RKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLY 281 (677)
T ss_dssp EEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred EEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCee
Confidence 98777322111 0013578889888888887664
Q ss_pred --CEEEEEcCCCceeeeeeccccCc----cccceEEEEEccCC---cEEEeec-CCeEEEEEecCCceeeEecCC--C--
Q psy7482 121 --TLRTWNLVKGRSAYITNLSSYGV----GFENLDSVVWSPEG---LLYAIPI-QNKAVVFSVEKAGVLQTLKSE--S-- 186 (327)
Q Consensus 121 --~i~iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~---~~l~~~~-~~~i~i~d~~~~~~~~~~~~~--~-- 186 (327)
.|..+|.++|+....+....+.. .......+....+| ..++.++ +|.++++|.++++.+..+... .
T Consensus 282 ~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~ 361 (677)
T 1kb0_A 282 LASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA 361 (677)
T ss_dssp TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred eEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc
Confidence 49999999999988776543210 01112233344467 5666666 999999999999988766521 0
Q ss_pred --------ce------------------------eEEEeecC-ceEEEeCC-----------------------------
Q psy7482 187 --------KV------------------------HSVCFLNE-TTVCTGNE----------------------------- 204 (327)
Q Consensus 187 --------~i------------------------~~~~~~~~-~~l~~~~~----------------------------- 204 (327)
++ ..++++|+ +++++...
T Consensus 362 ~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 362 SGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred cccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccc
Confidence 01 14678887 67666432
Q ss_pred --------------CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482 205 --------------ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA 270 (327)
Q Consensus 205 --------------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 270 (327)
.|.|..||+.+++.+.+++.. .+.....+. ..+..++.++.||.+++||.++++.++.+....
T Consensus 442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~--~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLT--TAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp CCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceE--eCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 278999999999998887643 334444443 567788889999999999999999999988544
Q ss_pred C-ceEEEeeeC---cEEEEEec----------------CCcEEEEEccCc
Q psy7482 271 S-RIKGLASHR---NHLICITS----------------AGDLVVWELNED 300 (327)
Q Consensus 271 ~-~v~~~~~~~---~~l~~~~~----------------dg~v~iw~~~~~ 300 (327)
+ ...-+.|.. .+++..+. .+.+..|.+...
T Consensus 519 ~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~~ 568 (677)
T 1kb0_A 519 GVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGGK 568 (677)
T ss_dssp CCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETCB
T ss_pred CcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEecccc
Confidence 2 222344433 45554333 367888888743
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.59 E-value=2.3e-12 Score=115.37 Aligned_cols=238 Identities=13% Similarity=0.087 Sum_probs=150.3
Q ss_pred ccccEEEEEECCCCCeEEE-----ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC------
Q psy7482 53 HEGTITCLKFTPEGSHLIS-----CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT------ 121 (327)
Q Consensus 53 ~~~~v~~~~~~~~~~~l~~-----~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~------ 121 (327)
|...+..++|||||++||. |+....|++||+.+++.+........ ...++|+ |++.|+.+..+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k---~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVK---FSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEE---SCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCce---eccEEEe-CCCEEEEEEecCccccccc
Confidence 5567889999999999884 33346799999999986543211111 3567899 9999998887743
Q ss_pred -------EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-----CCeEEEEEecCCc-eeeEec-CCCc
Q psy7482 122 -------LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-----QNKAVVFSVEKAG-VLQTLK-SESK 187 (327)
Q Consensus 122 -------i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~i~i~d~~~~~-~~~~~~-~~~~ 187 (327)
|++|++.++.............+......+.|+|||++++... .+.++++|+.++. ....+. +...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 9999988765422221211100122367899999999876542 2589999998763 333443 4444
Q ss_pred eeEEEeecC-ce-EEEeCC---CCcEEEEEcCCCce--eEEeeecccceEEEEEEecCCCcEEEEecC-CC--eEEEEEc
Q psy7482 188 VHSVCFLNE-TT-VCTGNE---ESAITAYNLTDGSH--LWQIKASASRIKGLVFFSIPQETTVCTGNE-ES--AITAYNL 257 (327)
Q Consensus 188 i~~~~~~~~-~~-l~~~~~---d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~-d~--~i~i~d~ 257 (327)
.... ++++ +. ++.... .+.|..+|+.++.. ...+..|...+. .|. ++++.|+.... ++ .|++|++
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s--~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVH--SGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEE--EETTEEEEEEEETTEEEEEEECT
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEE--EECCEEEEEEEECCeeEEEEEEC
Confidence 4444 4444 44 444443 36799999987654 345555655554 564 67777766554 43 6899998
Q ss_pred CCCceeEEee-cccCceEEEeeeC--cEEEEEecC----CcEEEEEccCc
Q psy7482 258 TDGSHLWHIK-ASASRIKGLASHR--NHLICITSA----GDLVVWELNED 300 (327)
Q Consensus 258 ~~~~~~~~~~-~~~~~v~~~~~~~--~~l~~~~~d----g~v~iw~~~~~ 300 (327)
..+ ....+. ...+.+..+.+++ ..++....+ +.+..||+.++
T Consensus 358 ~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 358 EGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp TSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred CCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 754 344443 2345677777776 444433333 67888888765
No 226
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.58 E-value=3.2e-13 Score=110.64 Aligned_cols=169 Identities=15% Similarity=0.142 Sum_probs=129.3
Q ss_pred ceEEEEEccCCcEEEeecCCeEEEEEecCCc-----------eeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCC
Q psy7482 147 NLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG-----------VLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTD 215 (327)
Q Consensus 147 ~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~-----------~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~ 215 (327)
++..+++++...++++|+...+.+|++.... ......... |+.++| .+..|+++ .++.|++||+++
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~s 115 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF-HGDQVLVS-TRNALYSLDLEE 115 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE-ETTEEEEE-ESSEEEEEESSS
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE-CCCEEEEE-cCCcEEEEEchh
Confidence 4889999999999999987788889876443 223344566 999999 44788888 889999999988
Q ss_pred CceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEecCCcEEEE
Q psy7482 216 GSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVW 295 (327)
Q Consensus 216 ~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw 295 (327)
.........|..++.++.+.+ | .+++++.||.|.+||+.++.... +...|++++|+|+-++.|..||++++|
T Consensus 116 l~~~~~~~~~~~~v~~i~~~~-p---~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~dg~i~~~ 187 (388)
T 1xip_A 116 LSEFRTVTSFEKPVFQLKNVN-N---TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLKDRSFQSF 187 (388)
T ss_dssp TTCEEEEEECSSCEEEEEECS-S---EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEETTSCEEEE
T ss_pred hhccCccceeecceeeEEecC-C---CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEcCCcEEEE
Confidence 776667777888888887742 2 28888999999999999887643 445899999999558899999999999
Q ss_pred EccCccCCCceeeee----c---CCCCceEEEEeCCCC
Q psy7482 296 ELNEDVTREPQRVSA----T---NDGCRFTCLAIRPPV 326 (327)
Q Consensus 296 ~~~~~~~~~~~~~~~----~---~~~~~i~~l~~~p~~ 326 (327)
+...........+.. . .+...|.++.|.+++
T Consensus 188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~ 225 (388)
T 1xip_A 188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ 225 (388)
T ss_dssp EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS
T ss_pred cCCCccccccceecCCcccccccCCCeeEEEEEEecCC
Confidence 887762100112211 1 256889999999875
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.57 E-value=1.4e-12 Score=115.99 Aligned_cols=272 Identities=10% Similarity=0.017 Sum_probs=181.6
Q ss_pred CCCEEEEecCCCeEEEEEcccccccccccccccc-----------EEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT-----------ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 91 (327)
.+..++.++.++.|.-+|..+|+.+..+...... ...+++ ++..+++++.|+.|..+|..+|+.+..
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 153 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWH 153 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEee
Confidence 4556666777899999999999888766532110 112222 366788889999999999999999888
Q ss_pred EEecccC---CceeeEEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCc-------------------
Q psy7482 92 FKKAHKG---TAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGV------------------- 143 (327)
Q Consensus 92 ~~~~~~~---~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~------------------- 143 (327)
+...... ..+...-.. .+..++.++. +|.|+.+|.++|+.+..........
T Consensus 154 ~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 154 QNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp EETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred ecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 7332010 112211111 2345555543 6899999999999987776533210
Q ss_pred --------cccceEEEEEccCCcEEEeec-CC-------------------eEEEEEecCCceeeEecC--C--------
Q psy7482 144 --------GFENLDSVVWSPEGLLYAIPI-QN-------------------KAVVFSVEKAGVLQTLKS--E-------- 185 (327)
Q Consensus 144 --------~~~~v~~~~~~~~~~~l~~~~-~~-------------------~i~i~d~~~~~~~~~~~~--~-------- 185 (327)
+......++++|++.++..+. ++ .|..+|.++++.+..++. .
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~ 312 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTST 312 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccC
Confidence 001123578888888777765 32 599999999999888762 1
Q ss_pred CceeEEEeecC----ceEEEeCCCCcEEEEEcCCCceeEEeeeccc-----------ce---------------------
Q psy7482 186 SKVHSVCFLNE----TTVCTGNEESAITAYNLTDGSHLWQIKASAS-----------RI--------------------- 229 (327)
Q Consensus 186 ~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----------~v--------------------- 229 (327)
.....+....+ ..++.++.+|.++++|.++++.+..++.... ++
T Consensus 313 ~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~ 392 (677)
T 1kb0_A 313 QPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGA 392 (677)
T ss_dssp SCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCS
T ss_pred CCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccc
Confidence 11222222223 4688999999999999999998876642210 11
Q ss_pred ---EEEEEEecCCCcEEEEecC-------------------------------------------CCeEEEEEcCCCcee
Q psy7482 230 ---KGLVFFSIPQETTVCTGNE-------------------------------------------ESAITAYNLTDGSHL 263 (327)
Q Consensus 230 ---~~~~~~~s~~~~~l~~~~~-------------------------------------------d~~i~i~d~~~~~~~ 263 (327)
..+++. |++.++++... .+.|..||+.+++.+
T Consensus 393 ~~w~~~a~d--p~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~ 470 (677)
T 1kb0_A 393 HNWHPMSFN--PQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA 470 (677)
T ss_dssp SCSSCCEEE--TTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE
T ss_pred cCCCCceEc--CCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE
Confidence 135663 77777766432 278999999999999
Q ss_pred EEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 264 WHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 264 ~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
+++.... ++.+..+.. .+++.++.||.+++||..++
T Consensus 471 W~~~~~~-~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 471 WSVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATG 508 (677)
T ss_dssp EEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred eecCCCC-CCcCcceEeCCCEEEEECCCCcEEEEECCCC
Confidence 8887433 344433443 78888999999999999988
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.56 E-value=1e-11 Score=100.84 Aligned_cols=216 Identities=13% Similarity=0.142 Sum_probs=141.9
Q ss_pred EEEEEe--C-CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482 17 VRSVAA--T-SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (327)
Q Consensus 17 v~~~~~--~-~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 93 (327)
..+.+| + +.++++...++.|..||..+++.. .+. ....+.+++|+|+|+++++. .+ .|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 345666 3 456677777899999998876543 222 34679999999999877754 44 49999998877543321
Q ss_pred ec--ccCCceeeEEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c
Q psy7482 94 KA--HKGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I 164 (327)
Q Consensus 94 ~~--~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 164 (327)
.. .....+..+.++|+|+++++... .+.|..++ +++....... ......++|+|+++.+..+ .
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~------~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD------ISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE------ESSEEEEEECTTSCEEEEEET
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC------CcccCCeEEcCCCCEEEEEEC
Confidence 11 11123889999999987665432 24455555 4443222111 1126789999999866555 3
Q ss_pred -CCeEEEEEec--CC-ce-----eeEec-CCCceeEEEeecCceEEEe-CCCCcEEEEEcCCCceeEEeeecccceEEEE
Q psy7482 165 -QNKAVVFSVE--KA-GV-----LQTLK-SESKVHSVCFLNETTVCTG-NEESAITAYNLTDGSHLWQIKASASRIKGLV 233 (327)
Q Consensus 165 -~~~i~i~d~~--~~-~~-----~~~~~-~~~~i~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 233 (327)
++.|.+||+. ++ +. ...+. ....+..+++++++.+.++ ..++.|..||. +++.+..+..+...+.+++
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~a 277 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPA 277 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEE
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEE
Confidence 6899999986 55 32 22222 3456778999988555544 45678999998 5777777777777799999
Q ss_pred EEecCCCcEEEEe
Q psy7482 234 FFSIPQETTVCTG 246 (327)
Q Consensus 234 ~~~s~~~~~l~~~ 246 (327)
|.. ++++.|+++
T Consensus 278 f~g-~d~~~L~vt 289 (326)
T 2ghs_A 278 FIG-PDASRLLVT 289 (326)
T ss_dssp EES-TTSCEEEEE
T ss_pred Eec-CCCCEEEEE
Confidence 952 676665444
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.55 E-value=3.6e-12 Score=104.34 Aligned_cols=263 Identities=10% Similarity=0.009 Sum_probs=160.5
Q ss_pred ccEEEEEe--CCCEEEEec--CCCeEEEEEccccccc------cccccccccEEEEEECCCCCeEEEecC-----CCcEE
Q psy7482 15 ASVRSVAA--TSKLAASSG--ADETVVLYDMVKRKQS------GALMQHEGTITCLKFTPEGSHLISCSD-----DGSIA 79 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~--~dg~v~~w~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~ 79 (327)
..+..+++ +|+++++.. .++.++||.+.+++.. .....+-..+..+++.++++++++-.. ++.|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 57888888 788888854 2343666666555432 111234567999999999876665433 57899
Q ss_pred EEEcCCCeEEEeEEeccc----CCceeeEEEecCCCEE-EEEe---CCCCEEEEEcCCCceeeeeeccccCccccceEEE
Q psy7482 80 IFRVGSWQLEKLFKKAHK----GTAVNHISIHPSGKLA-LSVG---KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSV 151 (327)
Q Consensus 80 iw~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l-~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 151 (327)
+||+.+++.+..+..... ...+..+++++++..+ ++-. .++.|.+||+.+++.......+... ... ..
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~-~~~---~~ 172 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGI-APE---DI 172 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTT-SCC---SC
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcc-ccc---cc
Confidence 999999987777632211 1126889999865455 4444 5789999999887754433211010 000 02
Q ss_pred EEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCC-cEEEEEcC---CCc-----eeE
Q psy7482 152 VWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEES-AITAYNLT---DGS-----HLW 220 (327)
Q Consensus 152 ~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~-~i~i~d~~---~~~-----~~~ 220 (327)
.+.+++..+.... ++.+..|. ..+..++++|+ +.|+.+...+ .+..++.. .+. ...
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~-------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 239 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPH-------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS 239 (343)
T ss_dssp CCEETTEECBEECTTSCEECCC-------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred ceeECCEEEEeccCCCceecee-------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc
Confidence 3444665555443 56554432 24678999999 4666665544 55555532 111 000
Q ss_pred --EeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec-ccCceEEEeeeC--cEEEEEecCCcEEEE
Q psy7482 221 --QIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA-SASRIKGLASHR--NHLICITSAGDLVVW 295 (327)
Q Consensus 221 --~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~--~~l~~~~~dg~v~iw 295 (327)
...++......+++ +++|.++++...++.|.+||..+++....... +...+.+++|.+ .++++.+..+.+.+|
T Consensus 240 ~~~~~g~~g~pdgia~--d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 240 KIERYSEKPICDGISI--DKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp TCEEEEECCSCSCEEE--CTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred ceEecccCCCCceEEE--CCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 11233445567888 48999999998899999999856664333322 234678999987 566666655555444
Q ss_pred E
Q psy7482 296 E 296 (327)
Q Consensus 296 ~ 296 (327)
.
T Consensus 318 ~ 318 (343)
T 2qe8_A 318 N 318 (343)
T ss_dssp B
T ss_pred c
Confidence 4
No 230
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.52 E-value=1.7e-11 Score=101.89 Aligned_cols=238 Identities=11% Similarity=0.149 Sum_probs=161.9
Q ss_pred EEEe--CCCEEEEec----------CCCeEEEEEccccccccccccc-------cccEEEEEECCCCCeEEEecC--CCc
Q psy7482 19 SVAA--TSKLAASSG----------ADETVVLYDMVKRKQSGALMQH-------EGTITCLKFTPEGSHLISCSD--DGS 77 (327)
Q Consensus 19 ~~~~--~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~ 77 (327)
.+++ |+++++++. .++.|.++|..+++.+..+.-. ......++|+|||++|+++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 5666 888887775 3678999999999888776421 123457899999999998764 578
Q ss_pred EEEEEcCCCeEEEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccc-eEEEEEcc
Q psy7482 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFEN-LDSVVWSP 155 (327)
Q Consensus 78 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~ 155 (327)
|.+.|+.+++.+..+..+. . ....|+ ...+++.+.||.+.+.+..+++...... ........+ ...+.+.+
T Consensus 202 VsVID~~t~kvv~~I~v~g----~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~-~~~~v~~~p~~~~~~~~~ 274 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPD----C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT-EVFHTEDELLINHPAFSL 274 (426)
T ss_dssp EEEEETTTTEEEEEEECCS----E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC-CCCSCTTSCBCSCCEECT
T ss_pred EEEEECCCCeEEEEEEcCC----c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee-eeeccCCCceeeEeeecC
Confidence 9999999999988883321 1 223343 3556667778888888885555432211 101000111 22456788
Q ss_pred CCcEEEeec-CCeEEEEEecCCcee--eEec-----------CCCceeEEEeecC-ceEEEeC----------CCCcEEE
Q psy7482 156 EGLLYAIPI-QNKAVVFSVEKAGVL--QTLK-----------SESKVHSVCFLNE-TTVCTGN----------EESAITA 210 (327)
Q Consensus 156 ~~~~l~~~~-~~~i~i~d~~~~~~~--~~~~-----------~~~~i~~~~~~~~-~~l~~~~----------~d~~i~i 210 (327)
++..++... .+.+.+.|....... ..+. .......++++|+ +++++.. .++.|.+
T Consensus 275 dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsV 354 (426)
T 3c75_H 275 RSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVV 354 (426)
T ss_dssp TTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEE
Confidence 877655544 789999998765421 1111 0112223688998 5555542 2457999
Q ss_pred EEcCCCceeEEeeecccceEEEEEEecCCCc-EEEEec-CCCeEEEEEcCCCceeEEe
Q psy7482 211 YNLTDGSHLWQIKASASRIKGLVFFSIPQET-TVCTGN-EESAITAYNLTDGSHLWHI 266 (327)
Q Consensus 211 ~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~~~~-~d~~i~i~d~~~~~~~~~~ 266 (327)
+|..+.+.+.++.... ....++| +|+++ ++++.. .++.|.++|+.+++.+.++
T Consensus 355 ID~~T~kvv~~I~vg~-~P~gia~--spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 355 LNAETGERINKIELGH-EIDSINV--SQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EETTTCCEEEEEEEEE-EECEEEE--CCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EECCCCeEEEEEECCC-CcCeEEE--ccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9999999999887543 4788899 48998 888877 5899999999999998887
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.52 E-value=1.1e-11 Score=111.00 Aligned_cols=237 Identities=9% Similarity=0.124 Sum_probs=146.6
Q ss_pred cCCccEEEEEe--CCCEEEE-----ecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCC--------
Q psy7482 12 SHTASVRSVAA--TSKLAAS-----SGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG-------- 76 (327)
Q Consensus 12 ~h~~~v~~~~~--~~~~l~~-----~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------- 76 (327)
+|...+..++| ||++||- |+....|++||+.+++.+... .+......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 45667888888 8998883 333467999999998865431 111113578899 999998887774
Q ss_pred -----cEEEEEcCCCeE--EEeEE-ec-ccCCceeeEEEecCCCEEEEEeC----CCCEEEEEcCCCce-eeeeeccccC
Q psy7482 77 -----SIAIFRVGSWQL--EKLFK-KA-HKGTAVNHISIHPSGKLALSVGK----DKTLRTWNLVKGRS-AYITNLSSYG 142 (327)
Q Consensus 77 -----~i~iw~~~~~~~--~~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~-~~~~~~~~~~ 142 (327)
.|++|++.+++. ...+. .. +... ...+.|+|||++|+.... +..|.++|+.++.. ...+.....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~-~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~- 281 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHR-YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD- 281 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCS-EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS-
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeE-EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC-
Confidence 399999977643 22221 12 2333 678899999998865443 24899999987642 222222211
Q ss_pred ccccceEEEEEccCCcEEE-eec----CCeEEEEEecCCce--eeE-ecCCCceeEEEeecC-ceEEEeC-CCC--cEEE
Q psy7482 143 VGFENLDSVVWSPEGLLYA-IPI----QNKAVVFSVEKAGV--LQT-LKSESKVHSVCFLNE-TTVCTGN-EES--AITA 210 (327)
Q Consensus 143 ~~~~~v~~~~~~~~~~~l~-~~~----~~~i~i~d~~~~~~--~~~-~~~~~~i~~~~~~~~-~~l~~~~-~d~--~i~i 210 (327)
..... +++++..|+ .+. .+.|..+|+.++.. ... ..+...+. .|+++ +.|+... .++ .|++
T Consensus 282 ----~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 282 ----ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp ----SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEE
T ss_pred ----ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEE
Confidence 13333 566665444 443 36899999987654 233 33444444 77776 5555544 444 6888
Q ss_pred EEcCCCceeEEeee-cccceEEEEEEecCCCcEEEEecCC----CeEEEEEcCCCce
Q psy7482 211 YNLTDGSHLWQIKA-SASRIKGLVFFSIPQETTVCTGNEE----SAITAYNLTDGSH 262 (327)
Q Consensus 211 ~d~~~~~~~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d----~~i~i~d~~~~~~ 262 (327)
||+..+ ....+.. ....+..+.+ +++++.++....+ +.++.||+.+++.
T Consensus 355 ~d~~g~-~~~~l~~p~~~~~~~~~~--~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 355 FDYEGK-RVREVALPGLGSVSGFNG--KHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp ECTTSC-EEEEECCSSSSEEEECCC--CTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EECCCC-eeEEeecCCCceEEeeec--CCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 998744 4444432 3344555555 3677766554333 7899999987763
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.49 E-value=3.6e-14 Score=117.22 Aligned_cols=190 Identities=16% Similarity=0.134 Sum_probs=112.1
Q ss_pred CCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc
Q psy7482 65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG 144 (327)
Q Consensus 65 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 144 (327)
++..+++++.||.|+.||..+|+....+ .. +. +.+..+..++..+++++.||.|+.||.++++.+.........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~-~~--~~-~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~-- 81 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTL-KE--DP-VLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE-- 81 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEE-EC--CC-SCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH--
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEe-cC--CC-ceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc--
Confidence 5778999999999999999999999887 33 33 555556667777888889999999999988876554332110
Q ss_pred ccceE-EEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEE
Q psy7482 145 FENLD-SVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQ 221 (327)
Q Consensus 145 ~~~v~-~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~ 221 (327)
.+. +..+..++ .+++++ ++.++.||.++|+.+..+..... ..++|+ +.+++++.++.|+.||.++++.+..
T Consensus 82 --~~~~sp~~~~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 82 --LVQASPCRSSDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp --HHTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred --ccccCceEecCC-EEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 010 01111233 455554 89999999999998887764332 234555 7888999999999999999998777
Q ss_pred eeecccceEEEEEEecCCC---cEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482 222 IKASASRIKGLVFFSIPQE---TTVCTGNEESAITAYNLTDGSHLWHIKASA 270 (327)
Q Consensus 222 ~~~~~~~v~~~~~~~s~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 270 (327)
+..+. ....++ +++. ..+++++.||.++.||..+++.++......
T Consensus 156 ~~~~~--~~~~~~--~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 203 (369)
T 2hz6_A 156 ATYFD--YAASLP--EDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYAS 203 (369)
T ss_dssp EEEEE--ECCBCC--CCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSS
T ss_pred Eeccc--ccCccc--cCCccccceEEEECCCCEEEEEECCCCcEEEEecCCC
Confidence 65332 122222 1221 567778889999999999999998877443
No 233
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.48 E-value=5.5e-11 Score=92.07 Aligned_cols=202 Identities=10% Similarity=0.069 Sum_probs=142.8
Q ss_pred eEEEeEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI 164 (327)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 164 (327)
+.+.++..+.... ...+.|++++.+.++.+. ++.|.++|+.+++......+.... ....+++. +..+....
T Consensus 10 ~vv~~~p~~~~~f-~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~----fgeGi~~~--g~~lyv~t 82 (266)
T 2iwa_A 10 EVLNEFPHDPYAF-TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY----FGEGLTLL--NEKLYQVV 82 (266)
T ss_dssp EEEEEEECCTTCC-EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC----CEEEEEEE--TTEEEEEE
T ss_pred eEEEEEECCCCCC-cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc----ceEEEEEe--CCEEEEEE
Confidence 4555552222223 688999998754444443 579999999999988877665431 12345554 44444443
Q ss_pred --CCeEEEEEecCCceeeEecCC-CceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecc--c---ceEEEEEE
Q psy7482 165 --QNKAVVFSVEKAGVLQTLKSE-SKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASA--S---RIKGLVFF 235 (327)
Q Consensus 165 --~~~i~i~d~~~~~~~~~~~~~-~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~---~v~~~~~~ 235 (327)
++.+.++|..+.+.+.++... ..- ..+++| +.++++..++.|.++|..+.+.+..+.... . ....+.+
T Consensus 83 ~~~~~v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~- 159 (266)
T 2iwa_A 83 WLKNIGFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEY- 159 (266)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-
T ss_pred ecCCEEEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEE-
Confidence 899999999999999988744 222 334455 555556678999999999988888776432 1 3567787
Q ss_pred ecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc-------------CceEEEeeeC---cEEEEEecCCcEEEEEccC
Q psy7482 236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA-------------SRIKGLASHR---NHLICITSAGDLVVWELNE 299 (327)
Q Consensus 236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~ 299 (327)
.++...+....++.|.+.|..+++.+..+.... ...+.++|+| .+++++...+.|.+.++..
T Consensus 160 --~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 160 --INGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp --ETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred --ECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 367666666678899999999999888886421 3568999998 6777887889999988876
Q ss_pred c
Q psy7482 300 D 300 (327)
Q Consensus 300 ~ 300 (327)
.
T Consensus 238 ~ 238 (266)
T 2iwa_A 238 V 238 (266)
T ss_dssp C
T ss_pred c
Confidence 5
No 234
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.46 E-value=8.6e-11 Score=104.44 Aligned_cols=272 Identities=11% Similarity=0.099 Sum_probs=174.7
Q ss_pred CCCEEEEecCCCeEEEEEcccccccccccccccc----------E-EEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT----------I-TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 91 (327)
.+..++.++.++.|.-+|..+|+.+..+...... + ..+++ .+..++.++.|+.|..+|..+|+.+..
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeee
Confidence 4556666777899999999999887666432110 0 11222 355788888999999999999999888
Q ss_pred EEecccC--Cceee-EEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeecccc-Cc------------------
Q psy7482 92 FKKAHKG--TAVNH-ISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSY-GV------------------ 143 (327)
Q Consensus 92 ~~~~~~~--~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~-~~------------------ 143 (327)
+...... ..+.+ ..+. ++ .++.+.. +|.|..+|.++|+.+..+..... ..
T Consensus 143 ~~~~~~~~~~~~~~~P~v~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVV-KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD 220 (668)
T ss_dssp EECSCTTSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred eccCCCCCcceecCCCEEE-CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence 7432211 00111 1111 33 5555543 58999999999999887754211 00
Q ss_pred -------cccceEEEEEccCCcEEEeec-CC-------------------eEEEEEecCCceeeEecCC----------C
Q psy7482 144 -------GFENLDSVVWSPEGLLYAIPI-QN-------------------KAVVFSVEKAGVLQTLKSE----------S 186 (327)
Q Consensus 144 -------~~~~v~~~~~~~~~~~l~~~~-~~-------------------~i~i~d~~~~~~~~~~~~~----------~ 186 (327)
+......++++|+..++..+. ++ .|..+|.++++.+..++.. .
T Consensus 221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~ 300 (668)
T 1kv9_A 221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQ 300 (668)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCC
Confidence 000112467888777777665 44 4999999999998887621 2
Q ss_pred ceeEEEeecCc----eEEEeCCCCcEEEEEcCCCceeEEeeeccc------------ce---------------------
Q psy7482 187 KVHSVCFLNET----TVCTGNEESAITAYNLTDGSHLWQIKASAS------------RI--------------------- 229 (327)
Q Consensus 187 ~i~~~~~~~~~----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------~v--------------------- 229 (327)
+.....+..++ .++.++.+|.++++|..+++.+...+.... ++
T Consensus 301 ~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~ 380 (668)
T 1kv9_A 301 QITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA 380 (668)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS
T ss_pred CcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccc
Confidence 22222222342 588999999999999999998754432110 00
Q ss_pred ---EEEEEEecCCCcEEEE------------------------------------ecCCCeEEEEEcCCCceeEEeeccc
Q psy7482 230 ---KGLVFFSIPQETTVCT------------------------------------GNEESAITAYNLTDGSHLWHIKASA 270 (327)
Q Consensus 230 ---~~~~~~~s~~~~~l~~------------------------------------~~~d~~i~i~d~~~~~~~~~~~~~~ 270 (327)
..+++. |+...+.. ...+|.|..||+.+++.+++...+.
T Consensus 381 ~~w~~~a~d--p~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~ 458 (668)
T 1kv9_A 381 HNWHSMSFN--PGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT 458 (668)
T ss_dssp SCSSCCEEE--TTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS
T ss_pred cCCCcceEC--CCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC
Confidence 013443 55444443 1134889999999999998887554
Q ss_pred Cce-EEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482 271 SRI-KGLASHRNHLICITSAGDLVVWELNED 300 (327)
Q Consensus 271 ~~v-~~~~~~~~~l~~~~~dg~v~iw~~~~~ 300 (327)
... ..+.....+++.++.||.|+.||..++
T Consensus 459 ~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 459 HWNGGTLSTAGNLVFQGTAAGQMHAYSADKG 489 (668)
T ss_dssp SCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CCcCceeEeCCCEEEEECCcccchhhhhhcC
Confidence 221 123333388999999999999999988
No 235
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=2e-11 Score=99.88 Aligned_cols=250 Identities=9% Similarity=0.064 Sum_probs=153.2
Q ss_pred ccEEEEEECCCCCeEEEec--CCCcEEEEEcCCCeEEEeEE------ecccCCceeeEEEecCCCEEEEEeC-----CCC
Q psy7482 55 GTITCLKFTPEGSHLISCS--DDGSIAIFRVGSWQLEKLFK------KAHKGTAVNHISIHPSGKLALSVGK-----DKT 121 (327)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~ 121 (327)
..+..++++|+|+.+++.. .++.+.||.+.+++.. .+. ..+... +..++++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~-p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDT-VLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSC-EEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeE-eeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 5789999999999888853 2343556655555433 221 122344 899999999876555433 578
Q ss_pred EEEEEcCCCceeeeeecccc-CccccceEEEEEccCC-cEEEee----cCCeEEEEEecCCceeeEecC-CCc-eeEEEe
Q psy7482 122 LRTWNLVKGRSAYITNLSSY-GVGFENLDSVVWSPEG-LLYAIP----IQNKAVVFSVEKAGVLQTLKS-ESK-VHSVCF 193 (327)
Q Consensus 122 i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~~~----~~~~i~i~d~~~~~~~~~~~~-~~~-i~~~~~ 193 (327)
|.+||+.+++....+.+... ......+..++++|++ ..+++. .++.|.+||..+++....+.. ... .....+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 99999998887666655322 1112346899999864 444443 367999999998887665542 111 001334
Q ss_pred ecCc-eEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCC-eEEEEEcC---CCc-----ee
Q psy7482 194 LNET-TVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEES-AITAYNLT---DGS-----HL 263 (327)
Q Consensus 194 ~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~-~i~i~d~~---~~~-----~~ 263 (327)
.+++ .+.+.+.++.+..|. ..+..+++ +|+++.|+.+..++ .+..++.. .+. ..
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~--s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPH--------------LGVNGIVL--DAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp EETTEECBEECTTSCEECCC--------------CCEEEEEE--CTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred eECCEEEEeccCCCceecee--------------cccceeEe--ccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence 4453 344556666665442 13567888 48998888776655 55555532 111 00
Q ss_pred E--EeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482 264 W--HIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 264 ~--~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~ 325 (327)
. ...++......+++++ .++++...++.|.+|+...+ ....+........+++++|.|+
T Consensus 239 ~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G---~~~~~~~~~~~~~p~~va~~~~ 301 (343)
T 2qe8_A 239 SKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR---AYKLLVTDEKLSWTDSFNFGSD 301 (343)
T ss_dssp TTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT---EEEEEEECGGGSCEEEEEECTT
T ss_pred cceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC---CEEEEEECCceecCCeeEECCC
Confidence 0 1123334566788988 77777778899999998444 2233322222345788888775
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.42 E-value=1.1e-10 Score=99.52 Aligned_cols=233 Identities=9% Similarity=0.054 Sum_probs=167.0
Q ss_pred EEEEe-----CCCEEEEec-CCCeEEEEEcccccccccccc-ccccEEEEEE-C-CCCCeEEEec---------------
Q psy7482 18 RSVAA-----TSKLAASSG-ADETVVLYDMVKRKQSGALMQ-HEGTITCLKF-T-PEGSHLISCS--------------- 73 (327)
Q Consensus 18 ~~~~~-----~~~~l~~~~-~dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~--------------- 73 (327)
..+++ ||+++.... .++.|.+.|+.+.+....+.- .......+++ + |+++++++++
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~ 169 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 169 (595)
T ss_dssp EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc
Confidence 45666 777776655 456799999999987774432 2245778887 5 8999998884
Q ss_pred ---CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC------------------------------
Q psy7482 74 ---DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK------------------------------ 120 (327)
Q Consensus 74 ---~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------------------------------ 120 (327)
.++.+.+.|.++.+....+..+. . ...++++|+|+++++.+.+.
T Consensus 170 ~~~~~~~vtvID~~t~~v~~qI~Vgg--~-pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~ 246 (595)
T 1fwx_A 170 VANYVNVFTAVDADKWEVAWQVLVSG--N-LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA 246 (595)
T ss_dssp GGGEEEEEEEEETTTTEEEEEEEESS--C-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred ccccCceEEEEECCCCeEEEEEEeCC--C-ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence 34679999999999888884433 3 56788999999999888653
Q ss_pred --------CEEEEEcCC--Cce-eeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCc----------
Q psy7482 121 --------TLRTWNLVK--GRS-AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAG---------- 177 (327)
Q Consensus 121 --------~i~iwd~~~--~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~---------- 177 (327)
.|.+.|.++ ++. +..++.... ..++.++|||++++++. ++++.++|+.+.+
T Consensus 247 ~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~------PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~ 320 (595)
T 1fwx_A 247 AGDYQELNGVKVVDGRKEASSLFTRYIPIANN------PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPR 320 (595)
T ss_dssp HTCSEEETTEEEEECSGGGCCSSEEEEEEESS------CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGG
T ss_pred CCCeeEECcEEEEeCcccCCceeEEEEecCCC------ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcc
Confidence 367777766 333 334444333 67899999999888876 8899999998663
Q ss_pred --eeeEecCCCceeEEEeecCce-EEEeCCCCcEEEEEcCC----------CceeEEeeecccce-----EEEEEEecCC
Q psy7482 178 --VLQTLKSESKVHSVCFLNETT-VCTGNEESAITAYNLTD----------GSHLWQIKASASRI-----KGLVFFSIPQ 239 (327)
Q Consensus 178 --~~~~~~~~~~i~~~~~~~~~~-l~~~~~d~~i~i~d~~~----------~~~~~~~~~~~~~v-----~~~~~~~s~~ 239 (327)
.............++|+|++. +++...|+.|..||+.. .+.+.++..|..+- ..+.. +||
T Consensus 321 ~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~--~~D 398 (595)
T 1fwx_A 321 SAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETL--DAT 398 (595)
T ss_dssp GGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTST--TCC
T ss_pred cceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEe--CCC
Confidence 344555667789999999964 45677899999999977 45677776654432 11122 489
Q ss_pred CcEEEEecC---CCe----------EEEEEcCCCc
Q psy7482 240 ETTVCTGNE---ESA----------ITAYNLTDGS 261 (327)
Q Consensus 240 ~~~l~~~~~---d~~----------i~i~d~~~~~ 261 (327)
|++|+++.. |+. -.++|+..++
T Consensus 399 Gk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 399 NDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp SSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred CCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 999998653 432 2889986554
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.41 E-value=1.9e-10 Score=98.04 Aligned_cols=226 Identities=12% Similarity=0.139 Sum_probs=157.2
Q ss_pred CCCeEEEecC-CCcEEEEEcCCCeEEEeEEecccCCceeeEEE-e-cCCCEEEEEeC------------------CCCEE
Q psy7482 65 EGSHLISCSD-DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISI-H-PSGKLALSVGK------------------DKTLR 123 (327)
Q Consensus 65 ~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~~~~~------------------dg~i~ 123 (327)
||++++.... +..|.+.|+.+.+....+....... +..+++ . |++++++++++ ++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~-phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKG-IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCS-EEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCC-CcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 7788776655 5579999999999888663233334 888888 4 89999998852 45799
Q ss_pred EEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C-------------------------------------
Q psy7482 124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q------------------------------------- 165 (327)
Q Consensus 124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~------------------------------------- 165 (327)
+.|.++.+....+..... ...++++|+|+++.+++ +
T Consensus 179 vID~~t~~v~~qI~Vgg~------pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGN------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEETTTTEEEEEEEESSC------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred EEECCCCeEEEEEEeCCC------ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 999999888777776543 55677899998877765 2
Q ss_pred -CeEEEEEecC--Cce-eeEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCc------------eeEEeeeccc
Q psy7482 166 -NKAVVFSVEK--AGV-LQTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGS------------HLWQIKASAS 227 (327)
Q Consensus 166 -~~i~i~d~~~--~~~-~~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~------------~~~~~~~~~~ 227 (327)
+.|.+.|.++ ++. +..+.-.....++.++|| .+ ++++..+.+|.++|+.+.+ ...++... .
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~ 331 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-L 331 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-S
T ss_pred ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-C
Confidence 1366777776 444 455655566788999999 44 5556688999999998653 23344333 3
Q ss_pred ceEEEEEEecCCCcEEEEecCCCeEEEEEcCC----------CceeEEeecccCce-----EEEeeeC--cEEEEEecC-
Q psy7482 228 RIKGLVFFSIPQETTVCTGNEESAITAYNLTD----------GSHLWHIKASASRI-----KGLASHR--NHLICITSA- 289 (327)
Q Consensus 228 ~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~----------~~~~~~~~~~~~~v-----~~~~~~~--~~l~~~~~d- 289 (327)
....++| +++|....+.-.|++|.+||+.. .+.+..+..|..+- .++..+| ++|+++..-
T Consensus 332 gP~h~aF--~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 332 GPLHTAF--DGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp CEEEEEE--CTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCC
T ss_pred CcceEEE--CCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCC
Confidence 4678889 48996566777899999999987 55677777665432 1223455 777776532
Q ss_pred -CcE-----------EEEEccCc
Q psy7482 290 -GDL-----------VVWELNED 300 (327)
Q Consensus 290 -g~v-----------~iw~~~~~ 300 (327)
..+ .++|+..+
T Consensus 410 kdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 410 KDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp TTSSCCCCSSCCEEEEEEECSSS
T ss_pred ccccccCCCCCCCcceEEEcCCC
Confidence 223 78888655
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.41 E-value=2.7e-10 Score=87.13 Aligned_cols=189 Identities=10% Similarity=0.081 Sum_probs=130.4
Q ss_pred eEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI 164 (327)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 164 (327)
+.+.++....... ...+.|+ ++.++.+.+.+| .|+.+|+++++......+... .......+++..+....
T Consensus 32 ~vv~~~phd~~~f-tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~------~FgeGit~~g~~ly~lt 103 (262)
T 3nol_A 32 QIVHSYPHDTKAF-TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR------YFGEGISDWKDKIVGLT 103 (262)
T ss_dssp EEEEEEECCTTCE-EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT------CCEEEEEEETTEEEEEE
T ss_pred EEEEEecCCCCcc-cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc------cceeEEEEeCCEEEEEE
Confidence 4455552222222 5788998 676677777766 899999999999888776543 33322233344444444
Q ss_pred --CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecc-----cceEEEEEEec
Q psy7482 165 --QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASA-----SRIKGLVFFSI 237 (327)
Q Consensus 165 --~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~s 237 (327)
++.+.+||..+.+.+.++.....-..++.. .+.|+.+..++.|.++|..+.+.+.++.... ..++.+.+
T Consensus 104 w~~~~v~v~D~~t~~~~~ti~~~~eG~glt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~--- 179 (262)
T 3nol_A 104 WKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHN-DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEW--- 179 (262)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSSCCCCEEEC-SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE---
T ss_pred eeCCEEEEEECccCcEEEEEECCCCceEEecC-CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEE---
Confidence 899999999999999999854433444432 2556666668889999999999888875432 23445777
Q ss_pred CCCcEEEEecCCCeEEEEEcCCCceeEEeecc------------cCceEEEeeeC---cEEEEEe
Q psy7482 238 PQETTVCTGNEESAITAYNLTDGSHLWHIKAS------------ASRIKGLASHR---NHLICIT 287 (327)
Q Consensus 238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------------~~~v~~~~~~~---~~l~~~~ 287 (327)
.+|+..+..-.++.|.+.|.++++.+..+... ....+.|+|+| .++++|-
T Consensus 180 ~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 180 VDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 47777766667889999999999988877642 13568999999 4555543
No 239
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.41 E-value=1.2e-08 Score=92.95 Aligned_cols=276 Identities=8% Similarity=0.113 Sum_probs=178.4
Q ss_pred EEEEEe-CCCEEEEecCCCeEEEEEcccccccccc-ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe
Q psy7482 17 VRSVAA-TSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (327)
Q Consensus 17 v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 94 (327)
|.++.. ....|..|..++-|..|+..+++..... ......|.++...+++.+.+ |+.++-+..||..+++..... .
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~-~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYL-H 252 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEEC-C
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEee-c
Confidence 777777 3344555665545888998766543221 12345688888877776544 554445899998876654332 2
Q ss_pred cc------cCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc--ccCccccceEEEEEccCCcEEEeecCC
Q psy7482 95 AH------KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS--SYGVGFENLDSVVWSPEGLLYAIPIQN 166 (327)
Q Consensus 95 ~~------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~ 166 (327)
.. ....|.++...++|.+.+ |+.+ -|.+||..+++........ ........|.++...++|.+.+...++
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~ 330 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFG 330 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSS
T ss_pred CCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCC
Confidence 11 122389998888886544 5555 5999998776543322111 112223459999999999887776678
Q ss_pred eEEEEEecCCceeeEec--------CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee--------cccceE
Q psy7482 167 KAVVFSVEKAGVLQTLK--------SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA--------SASRIK 230 (327)
Q Consensus 167 ~i~i~d~~~~~~~~~~~--------~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------~~~~v~ 230 (327)
.|..++..++... .+. ....|.++...+++.+.+|+.++-+..||..+++....... ....|.
T Consensus 331 Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 409 (795)
T 4a2l_A 331 GLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK 409 (795)
T ss_dssp CEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE
T ss_pred CeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE
Confidence 8999987655432 221 23568899888888899999988899999876654322111 234678
Q ss_pred EEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee----cccCceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482 231 GLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK----ASASRIKGLASHR-NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 231 ~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~ 300 (327)
++... ++++.|..|+.++-|..+|..+++...... .+...|.++...+ ..|..|+. +-|.+|+..++
T Consensus 410 ~i~~d--~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~ 481 (795)
T 4a2l_A 410 AVYVD--EKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQR 481 (795)
T ss_dssp EEEEE--TTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTT
T ss_pred EEEEc--CCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCC
Confidence 88773 677757777777789999988776433221 1345788888877 55666666 45888887665
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.41 E-value=1.9e-10 Score=87.94 Aligned_cols=191 Identities=10% Similarity=0.055 Sum_probs=134.0
Q ss_pred eEEEeeeeccCCccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccE--EEEEECCCCCeEEEecCCCcEE
Q psy7482 3 TLTQTFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTI--TCLKFTPEGSHLISCSDDGSIA 79 (327)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~i~ 79 (327)
+..+.+. +.-......+.| ++.+..+.+.+|.|+.+|+++++.+..+ -. ... ..+++.. ++..+..-.++.+.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEE
T ss_pred EEEEEEc-CCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEE
Confidence 3445553 233345578888 6666678888899999999999988777 22 223 2355543 23444455688999
Q ss_pred EEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE
Q psy7482 80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL 159 (327)
Q Consensus 80 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 159 (327)
+||.++.+.+.++..... -..++ ++++.|+.+..++.|.++|..+.+....+...........++.+.|. +|++
T Consensus 120 V~D~~Tl~~~~ti~~~~e---GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGE---GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI 193 (268)
T ss_dssp EEETTTTEEEEEEECSSC---CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEECCcCcEEEEEeCCCc---eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE
Confidence 999999999999844322 23444 56778887777899999999999888777665543223346778877 7777
Q ss_pred EEeec-CCeEEEEEecCCceeeEecCC--------------CceeEEEeecC--ceEEEeC
Q psy7482 160 YAIPI-QNKAVVFSVEKAGVLQTLKSE--------------SKVHSVCFLNE--TTVCTGN 203 (327)
Q Consensus 160 l~~~~-~~~i~i~d~~~~~~~~~~~~~--------------~~i~~~~~~~~--~~l~~~~ 203 (327)
++... ++.|.+.|.++++.+..+... .-.+.|+++|+ .++++|-
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 76664 789999999999998887621 35689999997 4555553
No 241
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.40 E-value=5e-10 Score=99.55 Aligned_cols=247 Identities=14% Similarity=0.154 Sum_probs=161.4
Q ss_pred EeCCCEEEEecCCCeEEEEEccccccccccccccc-cEEEEEECC--CCCeEEEecC------CCcEEEEEcCCCeEEEe
Q psy7482 21 AATSKLAASSGADETVVLYDMVKRKQSGALMQHEG-TITCLKFTP--EGSHLISCSD------DGSIAIFRVGSWQLEKL 91 (327)
Q Consensus 21 ~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~l~~~~~------d~~i~iw~~~~~~~~~~ 91 (327)
++.+..++.++.|+.|..+|..+|+.+..+..... ....+.-+| .+..++++.. +|.|..+|..+|+.+..
T Consensus 114 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 114 ALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 34556777888899999999999998876653210 000011111 1335555543 58999999999999887
Q ss_pred EEecccC-----------------------------CceeeEEEecCCCEEEEEeCCC-------------------CEE
Q psy7482 92 FKKAHKG-----------------------------TAVNHISIHPSGKLALSVGKDK-------------------TLR 123 (327)
Q Consensus 92 ~~~~~~~-----------------------------~~v~~~~~~~~~~~l~~~~~dg-------------------~i~ 123 (327)
+...... .....+++.++...++.+..++ .|.
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 7321100 0012468888888888887765 399
Q ss_pred EEEcCCCceeeeeeccccCc----cccceEEEEEccCCc---EEEeec-CCeEEEEEecCCceeeEecCCC---------
Q psy7482 124 TWNLVKGRSAYITNLSSYGV----GFENLDSVVWSPEGL---LYAIPI-QNKAVVFSVEKAGVLQTLKSES--------- 186 (327)
Q Consensus 124 iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~---~l~~~~-~~~i~i~d~~~~~~~~~~~~~~--------- 186 (327)
.+|.++|+.+..+....+.. ...+.....+..+++ .++.++ +|.++++|..+++.+...+...
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~ 353 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL 353 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccc
Confidence 99999999988876543211 011222233334665 566665 9999999999999875433110
Q ss_pred ----ce------------------------eEEEeecC-ceEEEe-----------------------------------
Q psy7482 187 ----KV------------------------HSVCFLNE-TTVCTG----------------------------------- 202 (327)
Q Consensus 187 ----~i------------------------~~~~~~~~-~~l~~~----------------------------------- 202 (327)
++ ..++++|+ +++++.
T Consensus 354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~ 433 (668)
T 1kv9_A 354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA 433 (668)
T ss_dssp TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred ccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCC
Confidence 00 12567776 554431
Q ss_pred -CCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482 203 -NEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA 270 (327)
Q Consensus 203 -~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 270 (327)
..+|.|..||+.+++.+.+.+.+.. .....+. ..+.+++.++.|+.++.||.++++.+..++...
T Consensus 434 ~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~~~~~--t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 434 AVVSGALLAWDPVKQKAAWKVPYPTH-WNGGTLS--TAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp GGCEEEEEEEETTTTEEEEEEEESSS-CCCCEEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCccceEEEEeCCCCcEEEEccCCCC-CcCceeE--eCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 1348899999999999888765433 3322332 467788889999999999999999999887653
No 242
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.40 E-value=6.2e-11 Score=96.90 Aligned_cols=255 Identities=10% Similarity=0.063 Sum_probs=163.0
Q ss_pred eEEEeeeeccCCccEEEEEe--CCCEEEEec----------CCCeEEEEEccccccccccccc-------cccEEEEEEC
Q psy7482 3 TLTQTFVTHSHTASVRSVAA--TSKLAASSG----------ADETVVLYDMVKRKQSGALMQH-------EGTITCLKFT 63 (327)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~-------~~~v~~~~~~ 63 (327)
+.+..+.. |. .+ .+.+ |+++++++. .++.|.+||+.+++.+.++... ......++++
T Consensus 57 ~v~~~i~v-G~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~S 132 (368)
T 1mda_H 57 VTLGHSLG-AF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNC 132 (368)
T ss_dssp EEEEEEEE-CT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEEC
T ss_pred eEEEEEeC-CC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEc
Confidence 44555553 22 23 4666 888888775 3688999999999998887643 1235678999
Q ss_pred CCCCeEEEecC--CCcEEE--EEcCCCeEEEeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCC-----Ccee
Q psy7482 64 PEGSHLISCSD--DGSIAI--FRVGSWQLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVK-----GRSA 133 (327)
Q Consensus 64 ~~~~~l~~~~~--d~~i~i--w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-----~~~~ 133 (327)
|||++++++.. +..+.+ +|..+ ...+..+ . .. .+.|++ ..+++.+.||.+.+.|+.+ ++..
T Consensus 133 pDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~---~-~~--~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~ 203 (368)
T 1mda_H 133 ASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA---S-CF--HIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVG 203 (368)
T ss_dssp TTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS---S-CC--CCEEEETTEEECCCCTTSCEEEECCSSCCCCEECC
T ss_pred CCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC---C-ce--EEccCCCeEEEEEcCCCCEEEEECccccccCCeEE
Confidence 99999998864 457888 88876 4444221 1 11 123443 3455667789998899876 4332
Q ss_pred eeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCc--eeeEecC-----------CCceeEEEeecC-ceE
Q psy7482 134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG--VLQTLKS-----------ESKVHSVCFLNE-TTV 199 (327)
Q Consensus 134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~--~~~~~~~-----------~~~i~~~~~~~~-~~l 199 (327)
.... ........+. .....+.++.+.. +.+.+.|..+.. .+..+.. ......++++|+ +++
T Consensus 204 ~~~t-~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~l 278 (368)
T 1mda_H 204 AQCT-GAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGI 278 (368)
T ss_dssp CCSC-TTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEE
T ss_pred EEee-eeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEE
Confidence 1110 1111112223 3444445566666 999999986542 2332221 111222689998 666
Q ss_pred EEeCC---------CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcE-EEEec-CCCeEEEEEcCCCceeEEeec
Q psy7482 200 CTGNE---------ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETT-VCTGN-EESAITAYNLTDGSHLWHIKA 268 (327)
Q Consensus 200 ~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~-l~~~~-~d~~i~i~d~~~~~~~~~~~~ 268 (327)
+++.. ++.+.++|+.+.+.+.++.... ....+++ +++|++ +++.. .++.|.++|+.+++.+.++..
T Consensus 279 yV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~--s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 279 MILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIA--AQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEE--CCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred EEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEE--CCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence 65432 2356699999999998887654 5788999 489874 55555 589999999999999999886
Q ss_pred ccCceEEEeee
Q psy7482 269 SASRIKGLASH 279 (327)
Q Consensus 269 ~~~~v~~~~~~ 279 (327)
... ...+++.
T Consensus 356 g~~-P~~i~~~ 365 (368)
T 1mda_H 356 DKG-PESLSVQ 365 (368)
T ss_dssp CSC-CCEEECC
T ss_pred CCC-CCEEEee
Confidence 553 3455554
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.40 E-value=1.3e-09 Score=84.33 Aligned_cols=207 Identities=13% Similarity=0.045 Sum_probs=143.5
Q ss_pred eeEEEeeeeccCCccEEEEEe--CCCEEEEecC--CCeEEEEEcccccccccccccc-ccEEEEEECCCCCeE-EEecCC
Q psy7482 2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGA--DETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHL-ISCSDD 75 (327)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~--dg~v~~w~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l-~~~~~d 75 (327)
++..+.+.. +.......+.+ ++.+.++.+. ++.|++.|+.+++.+..+.-.. .....+++. ++.| ++.-.+
T Consensus 9 ~~vv~~~p~-~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 9 VEVLNEFPH-DPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEEC-CTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred ceEEEEEEC-CCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence 345555542 22234678899 4544444443 5799999999999887765211 122345554 4444 455568
Q ss_pred CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482 76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP 155 (327)
Q Consensus 76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 155 (327)
+.+.++|..+++.+..+..+ ... ...+++|++.++.+..++.|.++|..+.+....+...........++.+.|.
T Consensus 86 ~~v~viD~~t~~v~~~i~~g-~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQ-MKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp SEEEEEETTTTEEEEEEECC-SSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred CEEEEEECCCCcEEEEEECC-CCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 89999999999999988444 122 2346668887777777899999999998877776654322112236788888
Q ss_pred CCcEEEeec-CCeEEEEEecCCceeeEecCC--------------CceeEEEeecC--ceEEEeCCCCcEEEEEcCCC
Q psy7482 156 EGLLYAIPI-QNKAVVFSVEKAGVLQTLKSE--------------SKVHSVCFLNE--TTVCTGNEESAITAYNLTDG 216 (327)
Q Consensus 156 ~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~--------------~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~ 216 (327)
++.+++... ++.|.+.|..+++.+..+... .....++++|+ ..++++...+.+...++...
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 776666554 789999999999998888632 35689999998 46777888899998887654
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.39 E-value=2.9e-10 Score=86.97 Aligned_cols=194 Identities=12% Similarity=0.168 Sum_probs=131.9
Q ss_pred eeEEEeeeeccCCccEEEEEe-CCCEEEEecCCC--eEEEEEccccccccccccccccEEEEEECCCCCeEEE-ecCCCc
Q psy7482 2 YTLTQTFVTHSHTASVRSVAA-TSKLAASSGADE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLIS-CSDDGS 77 (327)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~-~~~~l~~~~~dg--~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~ 77 (327)
|+..+.+. +.-......|.| ++.+..+.+.+| .|+.+|+++++.+..+.-.. ........++++.|.. .-.++.
T Consensus 31 ~~vv~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 31 YQIVHSYP-HDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEEE-CCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSE
T ss_pred eEEEEEec-CCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCE
Confidence 45666664 233445578888 666666777666 89999999999888776432 2322222223445544 445889
Q ss_pred EEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG 157 (327)
Q Consensus 78 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (327)
+.++|.++.+.+.++.....+ ..+ .++++.|+.+..++.|.++|..+.+....+...........++.+.|. +|
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG---~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEG---WGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCC---CCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEECccCcEEEEEECCCCc---eEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 999999999999998443322 333 356777777666788999999998887777664322112235667776 77
Q ss_pred cEEEeec-CCeEEEEEecCCceeeEecCC-------------CceeEEEeecC-ceEEEeC
Q psy7482 158 LLYAIPI-QNKAVVFSVEKAGVLQTLKSE-------------SKVHSVCFLNE-TTVCTGN 203 (327)
Q Consensus 158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~~~-------------~~i~~~~~~~~-~~l~~~~ 203 (327)
++++... ++.|.+.|.++++.+..+... ...+.++++|+ +.|++.+
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 7776664 889999999999998887621 35689999997 5544433
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.38 E-value=6.2e-09 Score=81.90 Aligned_cols=243 Identities=9% Similarity=0.021 Sum_probs=150.1
Q ss_pred CEEEEecCCCeEEEEEccccccc-----cccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEecccC
Q psy7482 25 KLAASSGADETVVLYDMVKRKQS-----GALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKG 98 (327)
Q Consensus 25 ~~l~~~~~dg~v~~w~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~ 98 (327)
.+|+.+.. +.|+.+++...... ..+......+..++|++++..|+ +-..++.|..++.........+ .....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~ 79 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-RQDLG 79 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-CTTCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE-ECCCC
Confidence 45555553 47888887654321 11222234578999999665555 4455789999998765543333 22223
Q ss_pred CceeeEEEecCCCEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE-Eeec---CCeEEEEEe
Q psy7482 99 TAVNHISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY-AIPI---QNKAVVFSV 173 (327)
Q Consensus 99 ~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~---~~~i~i~d~ 173 (327)
. ...+++++++..|+.+ ...+.|.++++.......... .. ......++++|++..+ ++.. .+.|..+++
T Consensus 80 ~-p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~~----~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 80 S-PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD-TG----LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp C-EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SS----CSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred C-ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE-CC----CCCccEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence 4 7899999976655555 456789999986433222211 11 1237899999965544 4433 368888887
Q ss_pred cCCceeeEec--CCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC
Q psy7482 174 EKAGVLQTLK--SESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE 249 (327)
Q Consensus 174 ~~~~~~~~~~--~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d 249 (327)
... ....+. .-.....++++++ +. +++-...+.|..+|.........+.. ......++. .++..+++....
T Consensus 154 dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~---d~~~lyva~~~~ 228 (267)
T 1npe_A 154 DGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTS---YGKNLYYTDWKT 228 (267)
T ss_dssp TSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEE---ETTEEEEEETTT
T ss_pred CCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEE---eCCEEEEEECCC
Confidence 543 333332 3356889999996 54 45566778999999875443333332 223456665 345555555567
Q ss_pred CeEEEEEcCCCceeEEeeccc-CceEEEeeeC
Q psy7482 250 SAITAYNLTDGSHLWHIKASA-SRIKGLASHR 280 (327)
Q Consensus 250 ~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~ 280 (327)
+.|..+|..+++.+..+.... .....+++.|
T Consensus 229 ~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~ 260 (267)
T 1npe_A 229 NSVIAMDLAISKEMDTFHPHKQTRLYGITIAL 260 (267)
T ss_dssp TEEEEEETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred CeEEEEeCCCCCceEEEccccccccceeeecC
Confidence 899999999999888876443 2456777666
No 246
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.37 E-value=9.8e-10 Score=95.75 Aligned_cols=271 Identities=11% Similarity=0.089 Sum_probs=170.5
Q ss_pred CCCEEEEecC-CCeEEEEEc-cccccccccccccc-c---------E-EEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482 23 TSKLAASSGA-DETVVLYDM-VKRKQSGALMQHEG-T---------I-TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (327)
Q Consensus 23 ~~~~l~~~~~-dg~v~~w~~-~~~~~~~~~~~~~~-~---------v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~ 89 (327)
.+..++.++. ++.|.-+|. .+++.+..+..... . + ..++. .+..++.++.|+.+..+|..+|+.+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 3555666666 889999999 89988766542211 0 0 11222 3567888888999999999999988
Q ss_pred EeEEecccC--Cceee-EEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCc-----------------
Q psy7482 90 KLFKKAHKG--TAVNH-ISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGV----------------- 143 (327)
Q Consensus 90 ~~~~~~~~~--~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~----------------- 143 (327)
......... ..+.+ .... ++ .++.++. +|.|..+|.++|+.+..........
T Consensus 139 W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 776332210 01221 1111 34 5666654 7899999999999887765432210
Q ss_pred ----------------cccceEEEEEccCCcEEEeec-C----------------CeEEEEEecCCceeeEecCC---C-
Q psy7482 144 ----------------GFENLDSVVWSPEGLLYAIPI-Q----------------NKAVVFSVEKAGVLQTLKSE---S- 186 (327)
Q Consensus 144 ----------------~~~~v~~~~~~~~~~~l~~~~-~----------------~~i~i~d~~~~~~~~~~~~~---~- 186 (327)
.......+++.++...+..+. + +.|..+|.++++.+..++.. .
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 000002355666555554443 1 36999999999998887621 0
Q ss_pred ---ceeE---EEeecCc----eEEEeCCCCcEEEEEcCCCceeEEeeecc-------------cce--------------
Q psy7482 187 ---KVHS---VCFLNET----TVCTGNEESAITAYNLTDGSHLWQIKASA-------------SRI-------------- 229 (327)
Q Consensus 187 ---~i~~---~~~~~~~----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~v-------------- 229 (327)
.+.. +....++ .++.++.+|.++++|..+++.+...+... .++
T Consensus 297 d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 297 DFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred ccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 1111 2222343 46778899999999999999887764321 111
Q ss_pred ------------EEEEEEecCCCcEEEEec-------------------------------------CCCeEEEEEcCCC
Q psy7482 230 ------------KGLVFFSIPQETTVCTGN-------------------------------------EESAITAYNLTDG 260 (327)
Q Consensus 230 ------------~~~~~~~s~~~~~l~~~~-------------------------------------~d~~i~i~d~~~~ 260 (327)
..+++. |+..++++.. .++.|..||+.++
T Consensus 377 ~~~P~~~Gg~~w~~~a~d--p~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG 454 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYD--PESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTG 454 (571)
T ss_dssp EESSCTTCSSCSCBCEEE--TTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTC
T ss_pred EECCCCccccCCCCceEC--CCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCC
Confidence 123453 5655555432 3578999999999
Q ss_pred ceeEEeecccCceEEEee--eCcEEEEEecCCcEEEEEccCc
Q psy7482 261 SHLWHIKASASRIKGLAS--HRNHLICITSAGDLVVWELNED 300 (327)
Q Consensus 261 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iw~~~~~ 300 (327)
+.++++.... .+.+... ....++.++.||.|+.||..++
T Consensus 455 ~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG 495 (571)
T 2ad6_A 455 KAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDG 495 (571)
T ss_dssp CEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCC
Confidence 9998886433 2332222 2377888999999999999888
No 247
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.37 E-value=1.6e-09 Score=94.44 Aligned_cols=244 Identities=16% Similarity=0.131 Sum_probs=158.0
Q ss_pred EeCCCEEEEecCCCeEEEEEcccccccccccccc--c--cEEE-EEECCCCCeEEEecC------CCcEEEEEcCCCeEE
Q psy7482 21 AATSKLAASSGADETVVLYDMVKRKQSGALMQHE--G--TITC-LKFTPEGSHLISCSD------DGSIAIFRVGSWQLE 89 (327)
Q Consensus 21 ~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~--~--~v~~-~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~ 89 (327)
+..+..++.++.|+.|..+|..+++.+....... . .+.+ .... ++ .+++++. ++.|..+|.++++.+
T Consensus 112 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 112 AYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 4456677888889999999999998876554211 0 1111 1111 34 5555554 789999999999988
Q ss_pred EeEEecccC------------------------------------CceeeEEEecCCCEEEEEeCC--------------
Q psy7482 90 KLFKKAHKG------------------------------------TAVNHISIHPSGKLALSVGKD-------------- 119 (327)
Q Consensus 90 ~~~~~~~~~------------------------------------~~v~~~~~~~~~~~l~~~~~d-------------- 119 (327)
..+...... .....+++.++...++.+..+
T Consensus 190 W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~ 269 (571)
T 2ad6_A 190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNK 269 (571)
T ss_dssp EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred EEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCce
Confidence 876322110 000235667766677766532
Q ss_pred --CCEEEEEcCCCceeeeeeccccC-----ccccceEEEEEccCCc---EEEeec-CCeEEEEEecCCceeeEecCCC--
Q psy7482 120 --KTLRTWNLVKGRSAYITNLSSYG-----VGFENLDSVVWSPEGL---LYAIPI-QNKAVVFSVEKAGVLQTLKSES-- 186 (327)
Q Consensus 120 --g~i~iwd~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~---~l~~~~-~~~i~i~d~~~~~~~~~~~~~~-- 186 (327)
+.|..+|.++++.+..+....+. ....++ -+...++|+ +++.+. +|.++++|..+++.+...+...
T Consensus 270 y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~ 348 (571)
T 2ad6_A 270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAV 348 (571)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTC
T ss_pred eEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCc
Confidence 25999999999998877654321 111112 223334674 455565 8999999999999887765211
Q ss_pred ------------ce--------------------------eEEEeecC-ceEEEeC------------------------
Q psy7482 187 ------------KV--------------------------HSVCFLNE-TTVCTGN------------------------ 203 (327)
Q Consensus 187 ------------~i--------------------------~~~~~~~~-~~l~~~~------------------------ 203 (327)
++ ..++++|+ +++++..
T Consensus 349 ~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~ 428 (571)
T 2ad6_A 349 NVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGAT 428 (571)
T ss_dssp CSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEE
T ss_pred cccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccc
Confidence 11 23567776 6655532
Q ss_pred -------------CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482 204 -------------EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA 270 (327)
Q Consensus 204 -------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 270 (327)
.+|.+..||..+++.+.+++... ++....+. ..+..++.++.|+.++.+|.++++.+.++....
T Consensus 429 ~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~--t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 429 LAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLY--TKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp EEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEE--ECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 35789999999999988876432 22222222 345667778999999999999999999887543
No 248
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.36 E-value=2.9e-09 Score=80.82 Aligned_cols=189 Identities=12% Similarity=0.090 Sum_probs=130.9
Q ss_pred eEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI 164 (327)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 164 (327)
+.+.+++...... ...+.|++ +.+..+.+.+| .|+.+|+.+++......+..... -..++.. +..+....
T Consensus 10 ~v~~~~phd~~~f-tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f----geGi~~~--~~~ly~lt 81 (243)
T 3mbr_X 10 RVVKRYPHDTTAF-TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF----GAGIVAW--RDRLIQLT 81 (243)
T ss_dssp EEEEEEECCTTCC-EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC----EEEEEEE--TTEEEEEE
T ss_pred EEEEEcCCCCccc-cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc----eeEEEEe--CCEEEEEE
Confidence 4555552222233 67899986 55666666654 89999999999988877765411 1233333 44444333
Q ss_pred --CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecc-----cceEEEEEEec
Q psy7482 165 --QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASA-----SRIKGLVFFSI 237 (327)
Q Consensus 165 --~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~s 237 (327)
++.+.+||..+.+.+.++.....-..++... +.|+.+..++.|.++|..+.+.+.++.... ..++.+.+
T Consensus 82 w~~~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg-~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~--- 157 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTPRARFRYPGEGWALTSDD-SHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW--- 157 (243)
T ss_dssp SSSSEEEEEETTTTEEEEEEECSSCCCEEEECS-SCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE---
T ss_pred eeCCEEEEEECCcCcEEEEEeCCCCceEEeeCC-CEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE---
Confidence 8999999999999999998554444555432 556655668899999999999888876432 24556776
Q ss_pred CCCcEEEEecCCCeEEEEEcCCCceeEEeecc-------------cCceEEEeeeC---cEEEEEe
Q psy7482 238 PQETTVCTGNEESAITAYNLTDGSHLWHIKAS-------------ASRIKGLASHR---NHLICIT 287 (327)
Q Consensus 238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~~---~~l~~~~ 287 (327)
.+|+..+..-.+..|.+.|.++++.+..+... ....+.|+++| +++++|-
T Consensus 158 ~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 158 VNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp ETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred eCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 57777766667889999999999988877632 13568899998 5555554
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.34 E-value=2.8e-09 Score=80.91 Aligned_cols=194 Identities=12% Similarity=0.111 Sum_probs=132.6
Q ss_pred eeEEEeeeeccCCccEEEEEe-CCCEEEEecCC--CeEEEEEcccccccccccccccc-EEEEEECCCCCeEEEecCCCc
Q psy7482 2 YTLTQTFVTHSHTASVRSVAA-TSKLAASSGAD--ETVVLYDMVKRKQSGALMQHEGT-ITCLKFTPEGSHLISCSDDGS 77 (327)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~-~~~~l~~~~~d--g~v~~w~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~ 77 (327)
|++.+.+. +........+.| ++.+..+.+.+ ..|+.+|+.+++.+..+.-.... -..+++. .++.....-.++.
T Consensus 9 ~~v~~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 9 YRVVKRYP-HDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEEE-CCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSE
T ss_pred eEEEEEcC-CCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCE
Confidence 56777774 234466779999 55555566654 48999999999988776532221 1233443 2334445566889
Q ss_pred EEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG 157 (327)
Q Consensus 78 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (327)
+.+||.++.+.+.++..... -..++ ++++.|+.+..++.|.++|..+.+....+...........++.+.+. +|
T Consensus 87 v~v~D~~tl~~~~ti~~~~~---Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G 160 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGE---GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG 160 (243)
T ss_dssp EEEEETTTTEEEEEEECSSC---CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEECCcCcEEEEEeCCCC---ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC
Confidence 99999999999999844332 23444 56777777777889999999998887777665432222336677766 67
Q ss_pred cEEEeec-CCeEEEEEecCCceeeEecC--------------CCceeEEEeecC-c-eEEEeC
Q psy7482 158 LLYAIPI-QNKAVVFSVEKAGVLQTLKS--------------ESKVHSVCFLNE-T-TVCTGN 203 (327)
Q Consensus 158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~~--------------~~~i~~~~~~~~-~-~l~~~~ 203 (327)
++++... ++.|.+.|.++++.+..+.. ..-.+.++++|+ + ++++|-
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 7666664 78999999999999888761 124688999997 4 445553
No 250
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.33 E-value=5.1e-09 Score=91.28 Aligned_cols=273 Identities=10% Similarity=0.053 Sum_probs=170.7
Q ss_pred CCCEEEEecC-CCeEEEEEc-cccccccccccccc-----------cEEEEEECCCCCe----EEEecCCCcEEEEEcCC
Q psy7482 23 TSKLAASSGA-DETVVLYDM-VKRKQSGALMQHEG-----------TITCLKFTPEGSH----LISCSDDGSIAIFRVGS 85 (327)
Q Consensus 23 ~~~~l~~~~~-dg~v~~w~~-~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~----l~~~~~d~~i~iw~~~~ 85 (327)
.+..++.++. ++.|.-+|. .+++.+..+..... ....+++.|.+.. ++.++.|+.|..+|..+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence 3556666666 889999999 89988766543211 0123455444444 88888999999999999
Q ss_pred CeEEEeEEecccC--Cceee-EEEecCCCEEEEEe------CCCCEEEEEcCCCceeeeeeccccCcc------------
Q psy7482 86 WQLEKLFKKAHKG--TAVNH-ISIHPSGKLALSVG------KDKTLRTWNLVKGRSAYITNLSSYGVG------------ 144 (327)
Q Consensus 86 ~~~~~~~~~~~~~--~~v~~-~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~------------ 144 (327)
|+.+......... ..+.+ ..+. ++ .+++++ .+|.|+.+|.++|+.+...........
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 9988776322210 01221 1122 34 455554 379999999999998877665432100
Q ss_pred --------------------ccce-EEEEEccCCcEEEeec-C----------------CeEEEEEecCCceeeEecCC-
Q psy7482 145 --------------------FENL-DSVVWSPEGLLYAIPI-Q----------------NKAVVFSVEKAGVLQTLKSE- 185 (327)
Q Consensus 145 --------------------~~~v-~~~~~~~~~~~l~~~~-~----------------~~i~i~d~~~~~~~~~~~~~- 185 (327)
...+ ..+++.++..++..+. + +.|..+|.++++.+..++..
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 0000 1345566666666554 3 38999999999998887721
Q ss_pred C---------ceeEEEee-cCc----eEEEeCCCCcEEEEEcCCCceeEEeeecc-------------cce---------
Q psy7482 186 S---------KVHSVCFL-NET----TVCTGNEESAITAYNLTDGSHLWQIKASA-------------SRI--------- 229 (327)
Q Consensus 186 ~---------~i~~~~~~-~~~----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~v--------- 229 (327)
. ...-+... .++ .++.++.+|.++++|.++++.+...+... .++
T Consensus 299 ~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 378 (599)
T 1w6s_A 299 HDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM 378 (599)
T ss_dssp TCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred CccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence 1 11112222 233 56778899999999999999887654211 111
Q ss_pred -----------------EEEEEEecCCCcEEEEe---------------------------------c------CCCeEE
Q psy7482 230 -----------------KGLVFFSIPQETTVCTG---------------------------------N------EESAIT 253 (327)
Q Consensus 230 -----------------~~~~~~~s~~~~~l~~~---------------------------------~------~d~~i~ 253 (327)
..+++. |+..++++. + .+|.|.
T Consensus 379 ~~~~~~~~P~~~Gg~~w~~~a~d--p~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~ 456 (599)
T 1w6s_A 379 DHLAKDICPSAMGYHNQGHDSYD--PKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIK 456 (599)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEE--TTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEE
T ss_pred CCCccEeccCcccccCCCCccCC--CCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEE
Confidence 123332 443333321 1 457899
Q ss_pred EEEcCCCceeEEeecccCceE-E-EeeeCcEEEEEecCCcEEEEEccCc
Q psy7482 254 AYNLTDGSHLWHIKASASRIK-G-LASHRNHLICITSAGDLVVWELNED 300 (327)
Q Consensus 254 i~d~~~~~~~~~~~~~~~~v~-~-~~~~~~~l~~~~~dg~v~iw~~~~~ 300 (327)
.||+.+++.+++..... +.. . +.....+++.++.||.++.||..++
T Consensus 457 A~D~~tG~~~W~~~~~~-~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG 504 (599)
T 1w6s_A 457 AYNAITGDYKWEKMERF-AVWGGTMATAGDLVFYGTLDGYLKARDSDTG 504 (599)
T ss_dssp EECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred EEECCCCCEEeEecCCC-CccCcceEecCCEEEEECCCCeEEEEECCCC
Confidence 99999999988876322 222 2 2333378888999999999999998
No 251
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.33 E-value=1.8e-09 Score=82.62 Aligned_cols=189 Identities=14% Similarity=0.156 Sum_probs=131.2
Q ss_pred eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-cC
Q psy7482 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-IQ 165 (327)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~ 165 (327)
+.+.++....... ...+.|+ ++.+..+.+.+|.|+.+|+++++..... +.... .-..+++..+ +++... .+
T Consensus 44 ~Vv~~~phd~~~f-tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~----FgeGit~~g~-~Ly~ltw~~ 115 (268)
T 3nok_A 44 HIIREYPHATNAF-TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI----FAEGLASDGE-RLYQLTWTE 115 (268)
T ss_dssp EEEEEEECCTTCC-EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC----CEEEEEECSS-CEEEEESSS
T ss_pred EEEEEEcCCCccc-cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc----ceeEEEEeCC-EEEEEEccC
Confidence 4445552222222 5788887 4667777788899999999999988877 55431 0223555433 333333 38
Q ss_pred CeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecc--c---ceEEEEEEecCCC
Q psy7482 166 NKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASA--S---RIKGLVFFSIPQE 240 (327)
Q Consensus 166 ~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~---~v~~~~~~~s~~~ 240 (327)
+.+.+||..+.+.+.++.....-..+++.. +.|+.+..++.|.++|..+.+.+.++.... . .++.+.| .+|
T Consensus 116 ~~v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~---~dG 191 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTRYSGEGWGLCYWN-GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC---ANG 191 (268)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCCEEEET-TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE---ETT
T ss_pred CEEEEEECCcCcEEEEEeCCCceeEEecCC-CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE---eCC
Confidence 999999999999999998544444555432 566666679999999999999888775422 2 3466777 478
Q ss_pred cEEEEecCCCeEEEEEcCCCceeEEeecc-------------cCceEEEeeeC---cEEEEEe
Q psy7482 241 TTVCTGNEESAITAYNLTDGSHLWHIKAS-------------ASRIKGLASHR---NHLICIT 287 (327)
Q Consensus 241 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~~---~~l~~~~ 287 (327)
+..+..-.+..|.+.|.++++.+..+... ....+.|+++| ++++||-
T Consensus 192 ~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 192 VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 77766667889999999999988777642 13578999998 6666654
No 252
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.33 E-value=1.6e-08 Score=92.12 Aligned_cols=274 Identities=12% Similarity=0.138 Sum_probs=174.1
Q ss_pred EEEEEe--CCCEEEEecCCCeEEEEEccccccccccccc-ccc-EEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482 17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQH-EGT-ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (327)
Q Consensus 17 v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~-~~~-v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 92 (327)
|.++.. ++.+.+ ++. +-+..||..+++........ ... |.++...+++.+.+ ++.++.|..|+..+++.....
T Consensus 133 i~~i~~d~~g~lwi-~t~-~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~ 209 (795)
T 4a2l_A 133 VNGIEEISPEQLLI-STP-EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVI 209 (795)
T ss_dssp CCEEEEEETTEEEE-EET-TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC
T ss_pred EEEEEECCCCCEEE-EEC-CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEec
Confidence 777777 454444 444 45889997765433221111 123 88888877776544 665555889998776654432
Q ss_pred EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc--ccCccccceEEEEEccCCcEEEeecCCeEEE
Q psy7482 93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS--SYGVGFENLDSVVWSPEGLLYAIPIQNKAVV 170 (327)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i 170 (327)
....... |.++...+++.+ ..++.++-+..||..+++........ ........|.++...++|.+.+...+ .+.+
T Consensus 210 ~~~~~~~-i~~i~~d~~g~l-wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~ 286 (795)
T 4a2l_A 210 PILGTKQ-IQAILQQSPTRI-WVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNI 286 (795)
T ss_dssp ----CCC-EEEEEEEETTEE-EEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEE
T ss_pred CCCCCCe-eEEEEEcCCCCE-EEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhhe
Confidence 1222334 888888877764 44555545999998776543322111 01122345999999998887766545 7899
Q ss_pred EEecCCceeeEec--------CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee-------cccceEEEEEE
Q psy7482 171 FSVEKAGVLQTLK--------SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA-------SASRIKGLVFF 235 (327)
Q Consensus 171 ~d~~~~~~~~~~~--------~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~~ 235 (327)
||..+++...... ....|.++...+++.+.+|+.++-|..|+....... .+.. ....|.++..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~- 364 (795)
T 4a2l_A 287 YHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVE- 364 (795)
T ss_dssp EETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEE-
T ss_pred EcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEE-
Confidence 9987765433221 235689999988889999999888999987654322 2211 2345788876
Q ss_pred ecCCCcEEEEecCCCeEEEEEcCCCceeEEee--------cccCceEEEeeeC-cE-EEEEecCCcEEEEEccCc
Q psy7482 236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIK--------ASASRIKGLASHR-NH-LICITSAGDLVVWELNED 300 (327)
Q Consensus 236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~~~-~~-l~~~~~dg~v~iw~~~~~ 300 (327)
+++|. |..|+.++-|..|+..+++...... .....|.++...+ .. |..|+.++-|..|+..++
T Consensus 365 -d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 365 -DKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp -CTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred -CCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 35554 5567777789999987765433221 1235788998877 54 788888778999998776
No 253
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.32 E-value=3.6e-09 Score=87.23 Aligned_cols=219 Identities=11% Similarity=0.077 Sum_probs=142.6
Q ss_pred CCCEE-EEecCCCeEEEEEcccc----ccccccc------c-ccccEEEEEECCCCCeEEEecCC------CcEEEEEcC
Q psy7482 23 TSKLA-ASSGADETVVLYDMVKR----KQSGALM------Q-HEGTITCLKFTPEGSHLISCSDD------GSIAIFRVG 84 (327)
Q Consensus 23 ~~~~l-~~~~~dg~v~~w~~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~~ 84 (327)
++++| +++..++.|.++|+.+. +...++. . ....-..+...|+| .++++..+ +.|.+.|.+
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 35554 56677899999998754 4444442 1 11245667888999 66665555 789999999
Q ss_pred CCeEEEeEEecccC-CceeeEEEecCCCEEEEEe-------------------CCCCEEEEEcCCCceeeeeeccccCcc
Q psy7482 85 SWQLEKLFKKAHKG-TAVNHISIHPSGKLALSVG-------------------KDKTLRTWNLVKGRSAYITNLSSYGVG 144 (327)
Q Consensus 85 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~ 144 (327)
+++.+..+..+... .--..+.|+|+++.+++.. .+.+|.+||+.+++....+.....
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~--- 249 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE--- 249 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT---
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC---
Confidence 99999888433221 1134578899999888874 368999999998877777666422
Q ss_pred ccceEEEEE--ccCCcEEEee-------cCCeEEEEEecCCce--eeEe--cC-----------------CCceeEEEee
Q psy7482 145 FENLDSVVW--SPEGLLYAIP-------IQNKAVVFSVEKAGV--LQTL--KS-----------------ESKVHSVCFL 194 (327)
Q Consensus 145 ~~~v~~~~~--~~~~~~l~~~-------~~~~i~i~d~~~~~~--~~~~--~~-----------------~~~i~~~~~~ 194 (327)
......+.| +|+++++.++ .+++|.+|....++. .+.+ .. ......+.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 112455655 9999866554 346787766554321 1111 10 2457889999
Q ss_pred cC-ceEE-EeCCCCcEEEEEcCCC---ceeEEeeecc--------------cceEEEEEEecCCCcEEEEec
Q psy7482 195 NE-TTVC-TGNEESAITAYNLTDG---SHLWQIKASA--------------SRIKGLVFFSIPQETTVCTGN 247 (327)
Q Consensus 195 ~~-~~l~-~~~~d~~i~i~d~~~~---~~~~~~~~~~--------------~~v~~~~~~~s~~~~~l~~~~ 247 (327)
+| ++|. +.-..+.|.+||+... +.+..+.... +.-..+++ +|+|++|+++.
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~l--SpDGk~LyVaN 399 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEI--SRDGRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEE--CTTSSEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEE--cCCCCEEEEEc
Confidence 99 4444 4456789999998633 3444443220 12467777 59999999887
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.31 E-value=4.6e-09 Score=85.08 Aligned_cols=238 Identities=8% Similarity=0.010 Sum_probs=146.7
Q ss_pred eeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc--------------------cccccEEEEEECC-
Q psy7482 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM--------------------QHEGTITCLKFTP- 64 (327)
Q Consensus 8 ~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~--------------------~~~~~v~~~~~~~- 64 (327)
+.+.+.-....++++ ++++++++..++.|..|+..+++.. .+. .....+..+++.+
T Consensus 12 i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~ 90 (322)
T 2fp8_A 12 ILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ 90 (322)
T ss_dssp EEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT
T ss_pred eecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCC
Confidence 334343344556777 6777888888999999998765332 111 0123578899997
Q ss_pred CCCeEEEecCCCcEEEEEcCCCeEEEeEEe---cccCCceeeEEEec-CCCEEEEEeC-----------------CCCEE
Q psy7482 65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKK---AHKGTAVNHISIHP-SGKLALSVGK-----------------DKTLR 123 (327)
Q Consensus 65 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~~~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~ 123 (327)
+++ |+.+...+.|..+|..+++.. .+.. +........+++.+ +|++.++-.. ++.|.
T Consensus 91 ~g~-l~v~d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 91 NNQ-LYIVDCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp TTE-EEEEETTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred CCc-EEEEECCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEE
Confidence 555 555544455888887755432 2211 11111278899999 8876665432 36788
Q ss_pred EEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c-CCeEEEEEecCCc--eeeEe-cCCCceeEEEeecCce
Q psy7482 124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I-QNKAVVFSVEKAG--VLQTL-KSESKVHSVCFLNETT 198 (327)
Q Consensus 124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~~i~i~d~~~~~--~~~~~-~~~~~i~~~~~~~~~~ 198 (327)
.+|..+++......... ....++++|+++.+.++ . .+.|..|++.... ....+ ...+ ...+++.+++.
T Consensus 169 ~~d~~~~~~~~~~~~~~------~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 169 KYDPSTKETTLLLKELH------VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH 241 (322)
T ss_dssp EEETTTTEEEEEEEEES------CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC
T ss_pred EEeCCCCEEEEeccCCc------cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC
Confidence 88887665432221111 26689999999866555 3 6899999987531 11122 1233 78899999855
Q ss_pred EEEeCC-----------CCcEEEEEcCCCceeEEeeecc----cceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482 199 VCTGNE-----------ESAITAYNLTDGSHLWQIKASA----SRIKGLVFFSIPQETTVCTGNEESAITAYNLTD 259 (327)
Q Consensus 199 l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~----~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~ 259 (327)
++++.. .+.|..+|. .++.+..+.... ..+..+++ .+++++++....+.|..+++..
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~---~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE---HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE---ETTEEEEECSSCSEEEEEEC--
T ss_pred EEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE---eCCEEEEeecCCCceEEEeccc
Confidence 555443 366888886 477766665432 34666665 5677777777788899998754
No 255
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.31 E-value=2.2e-08 Score=78.72 Aligned_cols=213 Identities=10% Similarity=0.062 Sum_probs=135.6
Q ss_pred cEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEe
Q psy7482 16 SVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKL 91 (327)
Q Consensus 16 ~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~ 91 (327)
.+..+++ +++ ++++-..++.|..+++........+.........+++.|++..|+ +-...+.|.+++.+.... ..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~ 115 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RV 115 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EE
Confidence 3557777 344 455555678999999876543333322234678999999755554 445567899999864332 22
Q ss_pred EEecccCCceeeEEEecCCCEEEEEeC---CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CC
Q psy7482 92 FKKAHKGTAVNHISIHPSGKLALSVGK---DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QN 166 (327)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~ 166 (327)
+....... ...++++|++..|+.+.. .+.|..+++... ....+.... ......++++|++..|..+. .+
T Consensus 116 ~~~~~~~~-P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~----~~~P~gia~d~~~~~lyv~d~~~~ 189 (267)
T 1npe_A 116 LFDTGLVN-PRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDN----LGLPNGLTFDAFSSQLCWVDAGTH 189 (267)
T ss_dssp EECSSCSS-EEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTT----CSCEEEEEEETTTTEEEEEETTTT
T ss_pred EEECCCCC-ccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECC----CCCCcEEEEcCCCCEEEEEECCCC
Confidence 31222234 789999997666665554 367888887543 222221111 12378999999876655553 68
Q ss_pred eEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeeccc-ceEEEEEE
Q psy7482 167 KAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASAS-RIKGLVFF 235 (327)
Q Consensus 167 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~ 235 (327)
.|..+|.........+........++...+..+++....+.|..+|..+++.+..+..... ....+++.
T Consensus 190 ~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~ 259 (267)
T 1npe_A 190 RAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIA 259 (267)
T ss_dssp EEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEE
T ss_pred EEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeec
Confidence 9999998765444444433445677766435566666778999999999988888764432 35677774
No 256
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.30 E-value=4.1e-09 Score=92.00 Aligned_cols=246 Identities=13% Similarity=0.098 Sum_probs=155.6
Q ss_pred EeCCCEEEEecCCCeEEEEEccccccccccccccc----cEE-EEEECC---CCC-eEEEec------CCCcEEEEEcCC
Q psy7482 21 AATSKLAASSGADETVVLYDMVKRKQSGALMQHEG----TIT-CLKFTP---EGS-HLISCS------DDGSIAIFRVGS 85 (327)
Q Consensus 21 ~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~----~v~-~~~~~~---~~~-~l~~~~------~d~~i~iw~~~~ 85 (327)
+..+..++.++.|+.|..+|..+|+.+........ .+. ...... +++ .+++++ .++.|.-+|..+
T Consensus 114 a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t 193 (582)
T 1flg_A 114 AIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT 193 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTT
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCC
Confidence 34456677788899999999999988766543210 111 001111 233 566655 378999999999
Q ss_pred CeEEEeEEeccc----------------C-----------------------CceeeEEEecCCCEEEEEeC--------
Q psy7482 86 WQLEKLFKKAHK----------------G-----------------------TAVNHISIHPSGKLALSVGK-------- 118 (327)
Q Consensus 86 ~~~~~~~~~~~~----------------~-----------------------~~v~~~~~~~~~~~l~~~~~-------- 118 (327)
|+.+........ . ..-..+++.|+..+++.+..
T Consensus 194 G~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~ 273 (582)
T 1flg_A 194 GEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTW 273 (582)
T ss_dssp CCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGG
T ss_pred CCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCc
Confidence 988776522100 0 00023566776677776653
Q ss_pred ------------C----CCEEEEEcCCCceeeeeeccccCc-----cccceEEEEEc-cCCc---EEEeec-CCeEEEEE
Q psy7482 119 ------------D----KTLRTWNLVKGRSAYITNLSSYGV-----GFENLDSVVWS-PEGL---LYAIPI-QNKAVVFS 172 (327)
Q Consensus 119 ------------d----g~i~iwd~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~-~~~~---~l~~~~-~~~i~i~d 172 (327)
| +.|..+|.++|+.+..+....+.. ...++ -+... .+|+ .++.++ +|.++++|
T Consensus 274 ~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD 352 (582)
T 1flg_A 274 ARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVD 352 (582)
T ss_dssp GGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEE
T ss_pred ccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEE
Confidence 2 579999999999988876543210 01112 12222 4563 566665 89999999
Q ss_pred ecCCceeeEecCCC--------------ce--------------------------------eEEEeecC-ceEEEeC--
Q psy7482 173 VEKAGVLQTLKSES--------------KV--------------------------------HSVCFLNE-TTVCTGN-- 203 (327)
Q Consensus 173 ~~~~~~~~~~~~~~--------------~i--------------------------------~~~~~~~~-~~l~~~~-- 203 (327)
.++++.+..+.... ++ ..++++|+ +++++..
T Consensus 353 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~ 432 (582)
T 1flg_A 353 RSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANH 432 (582)
T ss_dssp TTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEEC
T ss_pred CCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechh
Confidence 99999887665221 00 12455665 4444321
Q ss_pred -------------------------------CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeE
Q psy7482 204 -------------------------------EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAI 252 (327)
Q Consensus 204 -------------------------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i 252 (327)
.+|.|..||+.+++.+.+.+... +...-... ..+.+++.++.|+.+
T Consensus 433 ~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~--tagglvf~g~~dg~l 509 (582)
T 1flg_A 433 WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLA--TAGNLVFTGTGDGYF 509 (582)
T ss_dssp EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEE--ETTTEEEEECTTSEE
T ss_pred cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceE--eCCCEEEEECCCCcE
Confidence 36889999999999988876443 22221121 346677789999999
Q ss_pred EEEEcCCCceeEEeeccc
Q psy7482 253 TAYNLTDGSHLWHIKASA 270 (327)
Q Consensus 253 ~i~d~~~~~~~~~~~~~~ 270 (327)
+.||.++|+.+.+++...
T Consensus 510 ~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 510 KAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp EEEETTTCCEEEEEECSS
T ss_pred EEEECCCCCEEEEecCCC
Confidence 999999999999988654
No 257
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.29 E-value=7e-09 Score=85.57 Aligned_cols=223 Identities=10% Similarity=0.101 Sum_probs=142.1
Q ss_pred cEEEEEcCC-----CeEEEeEEecccCCceeeEEE-----------e--cCCCEEEEE-eCCCCEEEEEcCCC----cee
Q psy7482 77 SIAIFRVGS-----WQLEKLFKKAHKGTAVNHISI-----------H--PSGKLALSV-GKDKTLRTWNLVKG----RSA 133 (327)
Q Consensus 77 ~i~iw~~~~-----~~~~~~~~~~~~~~~v~~~~~-----------~--~~~~~l~~~-~~dg~i~iwd~~~~----~~~ 133 (327)
.|.+.|++. ++.+..+.....+.+.....| + +++++|+.. ..++.|.++|+.+. +..
T Consensus 44 ~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~ 123 (462)
T 2ece_A 44 FIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKII 123 (462)
T ss_dssp EEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEE
T ss_pred eEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceee
Confidence 455666654 566666544443333455555 6 777776665 46789999998644 232
Q ss_pred eeeecccc--CccccceEEEEEccCCcEEEeec-C------CeEEEEEecCCceeeEecCC----CceeEEEeecC-ceE
Q psy7482 134 YITNLSSY--GVGFENLDSVVWSPEGLLYAIPI-Q------NKAVVFSVEKAGVLQTLKSE----SKVHSVCFLNE-TTV 199 (327)
Q Consensus 134 ~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-~------~~i~i~d~~~~~~~~~~~~~----~~i~~~~~~~~-~~l 199 (327)
..+..... .........+...|+| +++++. + +.+.++|..+.+.+.++... ..-..+-|+|+ +.+
T Consensus 124 k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~m 202 (462)
T 2ece_A 124 KVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVL 202 (462)
T ss_dssp EEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEE
T ss_pred eeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEE
Confidence 22210000 1112236678889999 555543 4 68999999999999998722 22345788998 666
Q ss_pred EEeC-------------------CCCcEEEEEcCCCceeEEeeec--ccceEEEEEEecCCCcEEEEec------CCCeE
Q psy7482 200 CTGN-------------------EESAITAYNLTDGSHLWQIKAS--ASRIKGLVFFSIPQETTVCTGN------EESAI 252 (327)
Q Consensus 200 ~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~s~~~~~l~~~~------~d~~i 252 (327)
++.. ...+|.+||+.+++.+.++... ......+.|..+|+++++.+++ .++.|
T Consensus 203 vsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V 282 (462)
T 2ece_A 203 VSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSI 282 (462)
T ss_dssp EECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEE
T ss_pred EEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceE
Confidence 6663 3789999999998888877653 1334566663359999888776 45688
Q ss_pred EEEEcCCCce--eEEe--ecc----------------cCceEEEeeeC--cEEEEEec-CCcEEEEEccCc
Q psy7482 253 TAYNLTDGSH--LWHI--KAS----------------ASRIKGLASHR--NHLICITS-AGDLVVWELNED 300 (327)
Q Consensus 253 ~i~d~~~~~~--~~~~--~~~----------------~~~v~~~~~~~--~~l~~~~~-dg~v~iw~~~~~ 300 (327)
.+|....++. ...+ ... ......+.+++ ++|.++.. .+.|.+||+...
T Consensus 283 ~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 283 WLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp EEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred EEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 8877655431 1111 110 13467888998 66665554 678999999744
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.27 E-value=1.1e-08 Score=89.27 Aligned_cols=238 Identities=13% Similarity=0.110 Sum_probs=152.5
Q ss_pred EEEecCCCeEEEEEcccccccccccccc----ccEEE-EEECCCCCeEEEec------CCCcEEEEEcCCCeEEEeEEec
Q psy7482 27 AASSGADETVVLYDMVKRKQSGALMQHE----GTITC-LKFTPEGSHLISCS------DDGSIAIFRVGSWQLEKLFKKA 95 (327)
Q Consensus 27 l~~~~~dg~v~~w~~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~------~d~~i~iw~~~~~~~~~~~~~~ 95 (327)
|+.++.|+.|..+|..+|+.+....... ..+.+ .... ++ .+++++ .++.|+-+|.++|+.+..+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7788889999999999998876544221 01111 1111 34 455554 3799999999999988777332
Q ss_pred ccCC-----------------------------------ce-eeEEEecCCCEEEEEeCC----------------CCEE
Q psy7482 96 HKGT-----------------------------------AV-NHISIHPSGKLALSVGKD----------------KTLR 123 (327)
Q Consensus 96 ~~~~-----------------------------------~v-~~~~~~~~~~~l~~~~~d----------------g~i~ 123 (327)
.... .+ ..+++.++..+++.+..+ +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 1110 00 134666777778777655 3799
Q ss_pred EEEcCCCceeeeeeccccCc-----cccceEEEEEc-cCC---cEEEeec-CCeEEEEEecCCceeeEecCCC-------
Q psy7482 124 TWNLVKGRSAYITNLSSYGV-----GFENLDSVVWS-PEG---LLYAIPI-QNKAVVFSVEKAGVLQTLKSES------- 186 (327)
Q Consensus 124 iwd~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~-~~~---~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~------- 186 (327)
.+|.++|+....+....+.. ...++ -+... .+| ..++.++ +|.++++|.++++.+.......
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS 360 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence 99999999988776654311 11112 12222 466 4566565 8999999999999887654211
Q ss_pred -------ce--------------------------eEEEeecC-ceEEEe------------------------------
Q psy7482 187 -------KV--------------------------HSVCFLNE-TTVCTG------------------------------ 202 (327)
Q Consensus 187 -------~i--------------------------~~~~~~~~-~~l~~~------------------------------ 202 (327)
++ ..++++|+ +++++.
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 440 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP 440 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence 11 13456665 443321
Q ss_pred ---C------CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482 203 ---N------EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA 270 (327)
Q Consensus 203 ---~------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 270 (327)
+ ..|.+..||+.+++.+.+.+... +...-... ..+.+++.++.|+.++.||.++|+.+++++...
T Consensus 441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~--tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~ 514 (599)
T 1w6s_A 441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF-AVWGGTMA--TAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS 514 (599)
T ss_dssp CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS-CCCSBCEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCcCCcccCCCcCeEEEEECCCCCEEeEecCCC-CccCcceE--ecCCEEEEECCCCeEEEEECCCCCEEEEeeCCC
Confidence 1 35789999999999888775321 22211111 356777779999999999999999999987554
No 259
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.24 E-value=2.4e-07 Score=84.27 Aligned_cols=278 Identities=12% Similarity=0.033 Sum_probs=171.2
Q ss_pred ccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccc-------cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482 15 ASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALM-------QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (327)
Q Consensus 15 ~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~ 86 (327)
..|.++.. ....|..|..+ -+.+||..+++...... .....|.++...++|. |..|+..+-|.++|..++
T Consensus 211 ~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~ 288 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQN 288 (781)
T ss_dssp SSEEEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC
T ss_pred CceeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCC
Confidence 46888888 33334445545 58899987654332211 1245699998887775 555666456888998776
Q ss_pred eEEEeEE-------e-----cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc----ccCccccceEE
Q psy7482 87 QLEKLFK-------K-----AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS----SYGVGFENLDS 150 (327)
Q Consensus 87 ~~~~~~~-------~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~v~~ 150 (327)
+...... . .-....|.++...++|. |..|+.++-|..++..++......... ........|.+
T Consensus 289 ~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 367 (781)
T 3v9f_A 289 QFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSS 367 (781)
T ss_dssp ---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEE
T ss_pred eeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEE
Confidence 5432221 0 11122388888888776 566776777999998765433221110 11112345999
Q ss_pred EEEccCCcEEEeecCCeEEEEEecCCceeeEe---c-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEee---
Q psy7482 151 VVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTL---K-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIK--- 223 (327)
Q Consensus 151 ~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~---~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--- 223 (327)
+...+++.+.+...++.+..||..+++..... . ....|.++...+++.|.+|+.++-+..+|.++++.. .+.
T Consensus 368 i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~ 446 (781)
T 3v9f_A 368 VCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQ-IIELEK 446 (781)
T ss_dssp EEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEE-ECCSTT
T ss_pred EEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEE-EeccCC
Confidence 99998888776665778999987655432211 1 346788888887888888888778999998766432 232
Q ss_pred ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc-----cCceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482 224 ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS-----ASRIKGLASHR-NHLICITSAGDLVVWEL 297 (327)
Q Consensus 224 ~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----~~~v~~~~~~~-~~l~~~~~dg~v~iw~~ 297 (327)
.....|.++.. ++++.+.+ |+. +-|..+|..+++........ ...|.++...+ ..|..|+.++-|..|+.
T Consensus 447 ~~~~~v~~i~~--d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~ 522 (781)
T 3v9f_A 447 NELLDVRVFYE--DKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTP 522 (781)
T ss_dssp TCCCCEEEEEE--CTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECT
T ss_pred CCCCeEEEEEE--CCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeC
Confidence 12356788776 35666544 444 56889998776543322222 35788888887 66777776555777877
Q ss_pred cCc
Q psy7482 298 NED 300 (327)
Q Consensus 298 ~~~ 300 (327)
...
T Consensus 523 ~~~ 525 (781)
T 3v9f_A 523 DMQ 525 (781)
T ss_dssp TCC
T ss_pred CCC
Confidence 654
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.24 E-value=2e-08 Score=81.29 Aligned_cols=237 Identities=13% Similarity=0.089 Sum_probs=147.3
Q ss_pred cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEec-------------------ccCCceeeEEEec-CCCEEEE
Q psy7482 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA-------------------HKGTAVNHISIHP-SGKLALS 115 (327)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------------------~~~~~v~~~~~~~-~~~~l~~ 115 (327)
...++++.+++++++++..++.|..|+..+++.. .+... .... +..+++.+ ++ .|+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~-p~gi~~~~~~g-~l~v 96 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGR-TYDISYNLQNN-QLYI 96 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCC-EEEEEEETTTT-EEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCC-CceEEEcCCCC-cEEE
Confidence 3567889999988888888999999988765443 22110 1123 78899997 55 4555
Q ss_pred EeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCcEEEeec------------------CCeEEEEEecCC
Q psy7482 116 VGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI------------------QNKAVVFSVEKA 176 (327)
Q Consensus 116 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~------------------~~~i~i~d~~~~ 176 (327)
+...+.|..+|..+++....... ...........+++.+ +|+++++.. ++.+..+|..++
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATS-VDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESE-ETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred EECCCCEEEEeCCCCEEEEeccc-CCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 55555688888765543221111 1111112378899999 998777643 267888888766
Q ss_pred ceeeEecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCCCc--eeEEeeecccceEEEEEEecCCCcEEEEecC----
Q psy7482 177 GVLQTLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTDGS--HLWQIKASASRIKGLVFFSIPQETTVCTGNE---- 248 (327)
Q Consensus 177 ~~~~~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~---- 248 (327)
+.............++++|+ +.++ +-...+.|..|++.... ....+....+ ...+++ +++|++.++...
T Consensus 176 ~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~--d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 176 ETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKR--NADGHFWVSSSEELDG 252 (322)
T ss_dssp EEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEE--CTTSCEEEEEEEETTS
T ss_pred EEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEE--CCCCCEEEEecCcccc
Confidence 64433333344567999998 5454 44667899999987421 1122221223 667777 488887666544
Q ss_pred ------CCeEEEEEcCCCceeEEeeccc----CceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482 249 ------ESAITAYNLTDGSHLWHIKASA----SRIKGLASHR-NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 249 ------d~~i~i~d~~~~~~~~~~~~~~----~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~ 300 (327)
.+.|..+|. +++.+..+.... ..+..+++.. .++++....+.|..+++...
T Consensus 253 ~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp STTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC---
T ss_pred cccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecccc
Confidence 467888886 477776665442 3466676666 45555556777888887655
No 261
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.23 E-value=1.4e-08 Score=88.56 Aligned_cols=272 Identities=11% Similarity=0.084 Sum_probs=166.2
Q ss_pred CCEEEEecCCCeEEEEEccccccccccccccccE---------EEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe
Q psy7482 24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTI---------TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (327)
Q Consensus 24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v---------~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 94 (327)
+..++.++.++.|.-+|..+|+.+..+....... ..+++ .+..++.++.|+.|.-+|.++|+.+.....
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 3444444443449999999998877665322110 11222 255788888899999999999998877633
Q ss_pred cccC--Ccee-eEEEec---CCC-EEEEEe------CCCCEEEEEcCCCceeeeeeccccCc------------------
Q psy7482 95 AHKG--TAVN-HISIHP---SGK-LALSVG------KDKTLRTWNLVKGRSAYITNLSSYGV------------------ 143 (327)
Q Consensus 95 ~~~~--~~v~-~~~~~~---~~~-~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~~------------------ 143 (327)
.... ..+. ...... +++ .+++++ .+|.|..+|.++|+.+..........
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 2210 0011 111222 233 566554 37899999999999887654321000
Q ss_pred ------------------cccceEEEEEccCCcEEEeec---------------------C----CeEEEEEecCCceee
Q psy7482 144 ------------------GFENLDSVVWSPEGLLYAIPI---------------------Q----NKAVVFSVEKAGVLQ 180 (327)
Q Consensus 144 ------------------~~~~v~~~~~~~~~~~l~~~~---------------------~----~~i~i~d~~~~~~~~ 180 (327)
....-..++++|+..++.++. | +.|..+|.++++.+.
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 000012355666666555443 1 589999999999998
Q ss_pred EecC--CC--------ceeEEEee-cCc----eEEEeCCCCcEEEEEcCCCceeEEeeecc-------------cce---
Q psy7482 181 TLKS--ES--------KVHSVCFL-NET----TVCTGNEESAITAYNLTDGSHLWQIKASA-------------SRI--- 229 (327)
Q Consensus 181 ~~~~--~~--------~i~~~~~~-~~~----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~v--- 229 (327)
.++. .. ...-+... .++ .++.++.+|.++++|.++++.+..++... .++
T Consensus 306 ~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~ 385 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVERE 385 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECT
T ss_pred EEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEcc
Confidence 8762 11 11112221 232 67889999999999999999887665332 000
Q ss_pred -----------------------------EEEEEEecCCCcEEEEe---------------------------------c
Q psy7482 230 -----------------------------KGLVFFSIPQETTVCTG---------------------------------N 247 (327)
Q Consensus 230 -----------------------------~~~~~~~s~~~~~l~~~---------------------------------~ 247 (327)
..+++ +|+..++++. .
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~--dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~ 463 (582)
T 1flg_A 386 GQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAY--SQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD 463 (582)
T ss_dssp TCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEE--CTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred ccCCccccccccCCCceEECcCCccccCCCCceE--CCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence 01233 2333343332 1
Q ss_pred CCCeEEEEEcCCCceeEEeecccCceEE--EeeeCcEEEEEecCCcEEEEEccCc
Q psy7482 248 EESAITAYNLTDGSHLWHIKASASRIKG--LASHRNHLICITSAGDLVVWELNED 300 (327)
Q Consensus 248 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~dg~v~iw~~~~~ 300 (327)
.+|.|..||+.+++.+++..... ++.. +.....+++.++.||.++.||..++
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCC
Confidence 36889999999999998877543 2222 2223378888999999999999988
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.21 E-value=6.6e-07 Score=81.44 Aligned_cols=279 Identities=9% Similarity=0.067 Sum_probs=172.5
Q ss_pred ccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccc-------cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482 15 ASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALM-------QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (327)
Q Consensus 15 ~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~ 86 (327)
..|.++.. ....|..|..++-|..||..+++...... .....|.++...+++.+.+ |+.+ -+.+||..++
T Consensus 163 ~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~ 240 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNANTE 240 (781)
T ss_dssp CCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETTTT
T ss_pred cceEEEEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCCCC
Confidence 45788877 35555556666568889977654322110 1235689998888876554 4445 5899998776
Q ss_pred eEEEeEEec-----ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeee-------cc--ccCccccceEEEE
Q psy7482 87 QLEKLFKKA-----HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN-------LS--SYGVGFENLDSVV 152 (327)
Q Consensus 87 ~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~--~~~~~~~~v~~~~ 152 (327)
+........ .....|.++...++|. |..|+..+-|.++|..+++...... .. ........|.++.
T Consensus 241 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~ 319 (781)
T 3v9f_A 241 TFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIF 319 (781)
T ss_dssp EEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEE
T ss_pred cEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEE
Confidence 554322110 1122388888877775 5556665669999987665432211 00 1122234599999
Q ss_pred EccCCcEEEeecCCeEEEEEecCCceeeEe-------c---CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482 153 WSPEGLLYAIPIQNKAVVFSVEKAGVLQTL-------K---SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQI 222 (327)
Q Consensus 153 ~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~-------~---~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 222 (327)
..++|.+.+...++.|..++.......... . ....|.++...+++.+.+|+.++-+..||..++......
T Consensus 320 ~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 399 (781)
T 3v9f_A 320 QDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNK 399 (781)
T ss_dssp ECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-
T ss_pred EeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEcc
Confidence 999998777666888999987755432211 1 235688898888888889987778999997654322111
Q ss_pred ---eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee--cccCceEEEeeeC-cEEEEEecCCcEEEEE
Q psy7482 223 ---KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK--ASASRIKGLASHR-NHLICITSAGDLVVWE 296 (327)
Q Consensus 223 ---~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~ 296 (327)
......|.++.. ++++. |..|+.++-+..+|..+++...... .....|.++...+ ..|..|+. +-|..++
T Consensus 400 ~~~~~~~~~v~~i~~--d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~ 475 (781)
T 3v9f_A 400 ENRELLSNSVLCSLK--DSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVID 475 (781)
T ss_dssp ----CCCSBEEEEEE--CTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEE
T ss_pred CCCCCCCcceEEEEE--CCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEe
Confidence 122356778776 24555 4456666779999987765332211 1345788888887 66777776 5588888
Q ss_pred ccCc
Q psy7482 297 LNED 300 (327)
Q Consensus 297 ~~~~ 300 (327)
...+
T Consensus 476 ~~~~ 479 (781)
T 3v9f_A 476 LASK 479 (781)
T ss_dssp SSSS
T ss_pred CCCC
Confidence 7765
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.11 E-value=7.3e-07 Score=73.94 Aligned_cols=242 Identities=9% Similarity=-0.021 Sum_probs=150.0
Q ss_pred CEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEecccCCceee
Q psy7482 25 KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH 103 (327)
Q Consensus 25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~ 103 (327)
.+|+.+. ...|+..++........+. ....+..++|.+.+..|+ +-...+.|..++.........+ ...... ...
T Consensus 88 ~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-~~~~~~-p~g 163 (386)
T 3v65_B 88 PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-STGLES-PGG 163 (386)
T ss_dssp CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE-CSSCSC-CCC
T ss_pred ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE-eCCCCC-ccE
Confidence 3444444 3568888887655433333 334578999997655554 5456788999998766544433 323333 678
Q ss_pred EEEecCCCEEE-EEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C-CeEEEEEecCCcee
Q psy7482 104 ISIHPSGKLAL-SVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-NKAVVFSVEKAGVL 179 (327)
Q Consensus 104 ~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-~~i~i~d~~~~~~~ 179 (327)
+++.+.+..|+ +-...+.|.+.++......... ... ......++++|.+..|..+. . +.|..+++......
T Consensus 164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~-~~~----l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~ 238 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQS----LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR 238 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE-CSS----CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred EEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee-cCC----CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE
Confidence 89998555554 4445678888887644322222 111 12378999998766555543 4 78888887654433
Q ss_pred eEec-CCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482 180 QTLK-SESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYN 256 (327)
Q Consensus 180 ~~~~-~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d 256 (327)
.... .-.....++++|+ + ++++-...+.|..+|+........+.........+++ ..+.++++-...+.|..++
T Consensus 239 ~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav---~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 239 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV---FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE---ETTEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE---ECCEEEEeeCCCCeEEEEE
Confidence 3333 3456789999976 4 4555567788999998644333233333345667777 3566777777788899999
Q ss_pred cCCCceeEEeecccCceEEEee
Q psy7482 257 LTDGSHLWHIKASASRIKGLAS 278 (327)
Q Consensus 257 ~~~~~~~~~~~~~~~~v~~~~~ 278 (327)
..+++.+..+........++++
T Consensus 316 ~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 316 KFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp TTTCCSCEEEECSCSCCCCEEE
T ss_pred CCCCcceEEEccCCCCCceEEE
Confidence 7777766666544344455544
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.10 E-value=1.3e-06 Score=71.45 Aligned_cols=250 Identities=9% Similarity=-0.024 Sum_probs=150.8
Q ss_pred EEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEe
Q psy7482 17 VRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKK 94 (327)
Q Consensus 17 v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~ 94 (327)
..|.+. ...+|+.+. ...|+..++........+.. ...+..++|.+.+..|+ +-...+.|..++.........+ .
T Consensus 36 ~~C~~~~~~~~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-~ 112 (349)
T 3v64_C 36 RSCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-S 112 (349)
T ss_dssp SCEEESSSCCEEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-C
T ss_pred CcccccccCceeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE-e
Confidence 345554 334444443 34577778765443333332 34478999997655555 4456788999998765544433 2
Q ss_pred cccCCceeeEEEecCCCEE-EEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C-CeEEE
Q psy7482 95 AHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-NKAVV 170 (327)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-~~i~i 170 (327)
..... ...+++.+.+..| ++-...+.|.+.+++........ ... ......++++|.+..+..+. . +.|..
T Consensus 113 ~~~~~-p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~~----l~~P~~iavdp~~g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 113 TGLES-PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQS----LEKPRAIALHPMEGTIYWTDWGNTPRIEA 186 (349)
T ss_dssp SSCSC-CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CTT----CSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCCCC-ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE-eCC----CCCcceEEEecCcCeEEEeccCCCCEEEE
Confidence 23334 6789999855555 44455678999998654322222 111 12378999999665555443 4 78888
Q ss_pred EEecCCceeeEec-CCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEec
Q psy7482 171 FSVEKAGVLQTLK-SESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN 247 (327)
Q Consensus 171 ~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~ 247 (327)
+++.......... .-.....++++|+ +. +++-...+.|..+|+........+.........+++ .++..+++-.
T Consensus 187 ~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav---~~~~ly~td~ 263 (349)
T 3v64_C 187 SSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV---FEDSLYWTDW 263 (349)
T ss_dssp EETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE---ETTEEEEEET
T ss_pred EeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE---ECCEEEEecC
Confidence 8876443322222 3456789999985 54 455566788999998644332223333345667777 3566677777
Q ss_pred CCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482 248 EESAITAYNLTDGSHLWHIKASASRIKGLAS 278 (327)
Q Consensus 248 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 278 (327)
..+.|..++..+++.+..+........++++
T Consensus 264 ~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 264 HTKSINSANKFTGKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp TTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred CCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence 7788999887777766665543334444443
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.07 E-value=1.7e-06 Score=69.40 Aligned_cols=227 Identities=10% Similarity=0.050 Sum_probs=131.9
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC--CcEEEEEcCCCeEEE
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD--GSIAIFRVGSWQLEK 90 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~ 90 (327)
.....+++ +++++++-..++.|..||.... ....+. .......+++.++++++++.... ..|..++..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45667888 6777777767899999997643 322222 23568899999999866654332 246677777777654
Q ss_pred eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeee-eec--c--ccCccccceEEEEEccCCcEEEeec-
Q psy7482 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI-TNL--S--SYGVGFENLDSVVWSPEGLLYAIPI- 164 (327)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~--~--~~~~~~~~v~~~~~~~~~~~l~~~~- 164 (327)
......... ...++..+++..+++-..++.|..+|..+++.... ... . ...........+ +|+++.+.++.
T Consensus 110 ~~~~~~~~~-~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 110 LLTLPDAIF-LNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEECTTCSC-EEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEeCCCccc-cCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 332222222 44555555554444444578899999765432111 000 0 000011124555 78887665554
Q ss_pred -CCeEEEEEecC-Cce--eeEecCCCceeEEEeecCc-eEEEeCCCCcEEEEEcCCCceeE--EeeecccceEEEEEEec
Q psy7482 165 -QNKAVVFSVEK-AGV--LQTLKSESKVHSVCFLNET-TVCTGNEESAITAYNLTDGSHLW--QIKASASRIKGLVFFSI 237 (327)
Q Consensus 165 -~~~i~i~d~~~-~~~--~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~s 237 (327)
.+.|..|++.. ++. ...+........+++++++ ++++....+.|.++|.. ++... .+.......++++|. .
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~-g 264 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG-Q 264 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC-C
T ss_pred CCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEe-c
Confidence 78999999874 321 1222222456778899984 44555567889999975 55422 233333457888883 1
Q ss_pred --CCCcEEEEecC
Q psy7482 238 --PQETTVCTGNE 248 (327)
Q Consensus 238 --~~~~~l~~~~~ 248 (327)
++++.|+..+.
T Consensus 265 ~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 265 TEGDCTAIYVVTN 277 (306)
T ss_dssp STTTTTEEEEEEC
T ss_pred ccCCCCEEEEECC
Confidence 56666555443
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.00 E-value=3.4e-06 Score=67.60 Aligned_cols=221 Identities=9% Similarity=0.053 Sum_probs=134.8
Q ss_pred ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CEEEEEcCCCce
Q psy7482 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRS 132 (327)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~ 132 (327)
.....++|.++++++++-..++.|..||... +....+ . .... +..+++.++++++++..... .|..+|..+++.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~-~-~~~~-p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHA-T-VEGK-VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEE-E-CSSE-EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEE-e-CCCC-ceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 4577899999998777776788999998775 333333 1 2233 88999999998665544332 366777777765
Q ss_pred eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce-eeEe-------c---CCCceeEEEeecC-c-e
Q psy7482 133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV-LQTL-------K---SESKVHSVCFLNE-T-T 198 (327)
Q Consensus 133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~-~~~~-------~---~~~~i~~~~~~~~-~-~ 198 (327)
......... .....++..+++..+++.. ++.|+.+|...++. +... . .-.....+ +++ + +
T Consensus 108 ~~~~~~~~~----~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l 181 (306)
T 2p4o_A 108 ETLLTLPDA----IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL 181 (306)
T ss_dssp EEEEECTTC----SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred EEEEeCCCc----cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence 443333221 1134455556665555554 78999999765421 1110 0 11234555 666 4 4
Q ss_pred EEEeCCCCcEEEEEcCC-Cce--eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE--EeecccCce
Q psy7482 199 VCTGNEESAITAYNLTD-GSH--LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW--HIKASASRI 273 (327)
Q Consensus 199 l~~~~~d~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~v 273 (327)
+++-...+.|..|++.. ++. ...+.. ......+++ +++|+++++....+.|.++|.. ++... .+.......
T Consensus 182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~v--d~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p 257 (306)
T 2p4o_A 182 YVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAF--DVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGS 257 (306)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEE--BTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTE
T ss_pred EEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEE--CCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCc
Confidence 55666788999999874 321 111211 123566777 4889887777778899999975 65422 333333467
Q ss_pred EEEeee---C--cEEEEEecC
Q psy7482 274 KGLASH---R--NHLICITSA 289 (327)
Q Consensus 274 ~~~~~~---~--~~l~~~~~d 289 (327)
++++|. + +.|+.++..
T Consensus 258 ~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 258 TAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEEEECCSTTTTTEEEEEECT
T ss_pred eEEEEecccCCCCEEEEECCC
Confidence 888887 5 455544443
No 267
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.98 E-value=3.4e-07 Score=81.51 Aligned_cols=230 Identities=9% Similarity=0.058 Sum_probs=132.4
Q ss_pred CCCEEEEecCCC-----------eEEEEEccccccccc--cc-cccccEEEEEECCCCCeEEEecC-CCcEEEEEcCCCe
Q psy7482 23 TSKLAASSGADE-----------TVVLYDMVKRKQSGA--LM-QHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQ 87 (327)
Q Consensus 23 ~~~~l~~~~~dg-----------~v~~w~~~~~~~~~~--~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~ 87 (327)
++++++.|+.+. .+.+||..+++.... +. .+.....++++.++++.++.|+. +..+.+||..+.+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 778888887543 588999988764322 21 12233345677889999999984 4589999998765
Q ss_pred EEEeEEecccCCceeeEEEecCCCEEEEEe-CC-----CCEEEEEcCCCceeeee-----eccccCccccceEEEEEccC
Q psy7482 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVG-KD-----KTLRTWNLVKGRSAYIT-----NLSSYGVGFENLDSVVWSPE 156 (327)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~ 156 (327)
....- .......-.++...+++++++.|+ .+ ..+.+||..+.+..... +...... ...+..+
T Consensus 277 W~~~~-~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~------~~~~~~~ 349 (656)
T 1k3i_A 277 WIPGP-DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK------QGLYRSD 349 (656)
T ss_dssp EEECC-CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT------TGGGTTT
T ss_pred eeECC-CCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc------cceeecC
Confidence 44332 212222123455667899999988 34 56999999887654321 1111100 0112233
Q ss_pred CcEEEee----------cCCeEEEEEecCCceeeEecCC----------CceeEEEeec-C-ceEEEeCCCC--------
Q psy7482 157 GLLYAIP----------IQNKAVVFSVEKAGVLQTLKSE----------SKVHSVCFLN-E-TTVCTGNEES-------- 206 (327)
Q Consensus 157 ~~~l~~~----------~~~~i~i~d~~~~~~~~~~~~~----------~~i~~~~~~~-~-~~l~~~~~d~-------- 206 (327)
+..++.+ ....+..||..+.......... ..-.++.+.. + .+++.|+.++
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 4433333 2356788888876644333211 1223444433 3 6677776432
Q ss_pred ---cEEEEEcCCCceeEEe--eecccce-EEEEEEecCCCcEEEEecCC-----------CeEEEEEcCCCc
Q psy7482 207 ---AITAYNLTDGSHLWQI--KASASRI-KGLVFFSIPQETTVCTGNEE-----------SAITAYNLTDGS 261 (327)
Q Consensus 207 ---~i~i~d~~~~~~~~~~--~~~~~~v-~~~~~~~s~~~~~l~~~~~d-----------~~i~i~d~~~~~ 261 (327)
.+.+||..+.+-.... ..+.... .+++. .++++.++.|+.+ ..+.+||..+.+
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~--l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVV--LPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEE--CTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEE--CCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 5778887765433222 1122222 22233 2799999999864 468999987765
No 268
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.96 E-value=4.4e-06 Score=67.18 Aligned_cols=242 Identities=11% Similarity=0.040 Sum_probs=144.5
Q ss_pred EEEEecCCCeEEEEEcccccccc-ccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEecccCCceee
Q psy7482 26 LAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH 103 (327)
Q Consensus 26 ~l~~~~~dg~v~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~ 103 (327)
+|+.+. ...|+..++....... .+........+++|.+.+..| ++-...+.|..++.........+....... ...
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~-p~g 83 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS-PDG 83 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC-CCE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC-ccE
Confidence 344433 4678889987653111 121223456789999854444 555567889999987653222221222233 678
Q ss_pred EEEecCCCEE-EEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---CCeEEEEEecCCcee
Q psy7482 104 ISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVL 179 (327)
Q Consensus 104 ~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~ 179 (327)
+++.+.+..| ++-...+.|.+++++........ ... ......+++.|.+..+..+. .+.|..+++......
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~~----~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~ 158 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF-WQE----LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 158 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSS----CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEE-eCC----CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE
Confidence 8998755444 44455678999998654322221 111 22378999998655544443 478888887643332
Q ss_pred eEec-CCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482 180 QTLK-SESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYN 256 (327)
Q Consensus 180 ~~~~-~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d 256 (327)
.... .-.....++++++ +. +++-...+.|..+|+..................+++. .+.++.+-...+.|..++
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~---~~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF---EDILYWTDWSTHSILACN 235 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE---TTEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe---CCEEEEEecCCCeEEEEE
Confidence 2222 3356789999985 54 4555677889999986433222222233445677773 456666766778999999
Q ss_pred cCCCceeEEeecccCceEEEe
Q psy7482 257 LTDGSHLWHIKASASRIKGLA 277 (327)
Q Consensus 257 ~~~~~~~~~~~~~~~~v~~~~ 277 (327)
..+++....+........+++
T Consensus 236 ~~~G~~~~~i~~~~~~P~~i~ 256 (318)
T 3sov_A 236 KYTGEGLREIHSDIFSPMDIH 256 (318)
T ss_dssp TTTCCSCEEEECCCSSCCCEE
T ss_pred CCCCCceEEEeCCCCCCcEEE
Confidence 888876666654333344444
No 269
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.91 E-value=1.2e-05 Score=64.96 Aligned_cols=268 Identities=10% Similarity=0.046 Sum_probs=146.7
Q ss_pred CccEEEEEe-C-CCEEEEecCCCeEEEEEccccccccc--c--ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482 14 TASVRSVAA-T-SKLAASSGADETVVLYDMVKRKQSGA--L--MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (327)
Q Consensus 14 ~~~v~~~~~-~-~~~l~~~~~dg~v~~w~~~~~~~~~~--~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 87 (327)
...+.++.| + +..++ ++.+|.|. .....++.-.. . ......+.++.|.+ +..++ ++..+.|.. ..+.++
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCC
Confidence 457999999 4 45555 45577653 33333321111 1 12345688999986 44444 455664433 223333
Q ss_pred EEEeEEe--cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC
Q psy7482 88 LEKLFKK--AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ 165 (327)
Q Consensus 88 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 165 (327)
.-..... ..... +..+.+.+++..++.+ .+|.|..- .+.++.-....... ...+..+.+.|++.+++++.+
T Consensus 110 tW~~~~~~~~~~~~-~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~----~~~~~~~~~~~~~~~~~~g~~ 182 (327)
T 2xbg_A 110 SWSQIPLDPKLPGS-PRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEA----IGVMRNLNRSPSGEYVAVSSR 182 (327)
T ss_dssp SCEECCCCTTCSSC-EEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSC----CCCEEEEEECTTSCEEEEETT
T ss_pred CceECccccCCCCC-eEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCC----CcceEEEEEcCCCcEEEEECC
Confidence 2222211 12234 6778877776655544 45654321 22343322222211 123888999999999988876
Q ss_pred CeEEEEEecCCceeeEe--cCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee----cccceEEEEEEecCC
Q psy7482 166 NKAVVFSVEKAGVLQTL--KSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA----SASRIKGLVFFSIPQ 239 (327)
Q Consensus 166 ~~i~i~d~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~s~~ 239 (327)
+.+..-+-..++.-..+ .....+..+.+.+++.++.++.+|.+++.+...++.-..+.. +...+..+.+. ++
T Consensus 183 G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~--~~ 260 (327)
T 2xbg_A 183 GSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR--TP 260 (327)
T ss_dssp SSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES--SS
T ss_pred CcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEec--CC
Confidence 66554332113322222 245678888898886666777788877764222332222221 22347788874 66
Q ss_pred CcEEEEecCCCeEEEEEcCCCceeEEeec---ccCceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482 240 ETTVCTGNEESAITAYNLTDGSHLWHIKA---SASRIKGLASHR-NHLICITSAGDLVVWEL 297 (327)
Q Consensus 240 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~ 297 (327)
+..++++. ++.+ .+..+.++.-..+.. ....+.++.|.+ ..+++++.+|.|.-++-
T Consensus 261 ~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 261 NEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp SCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 77666665 5666 344444543333332 235678888865 77778888997766553
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.90 E-value=6.2e-06 Score=67.34 Aligned_cols=213 Identities=7% Similarity=-0.041 Sum_probs=131.6
Q ss_pred cEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCeEEEe
Q psy7482 16 SVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKL 91 (327)
Q Consensus 16 ~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~ 91 (327)
.+..++| ++.++++-...+.|..+++........+.........+++.+.+. +.++-...+.|.+.+++.... ..
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~ 152 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KV 152 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EE
Confidence 3567777 344555555678888888875543332322223456788887544 445556677899999875433 33
Q ss_pred EEecccCCceeeEEEecCCCEEEEEeC-C-CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCe
Q psy7482 92 FKKAHKGTAVNHISIHPSGKLALSVGK-D-KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNK 167 (327)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~ 167 (327)
+....... ...+++.|.+..|+.... . +.|..+++...... .+.... ......++++|++..|..+. .+.
T Consensus 153 l~~~~l~~-P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~~~~~----~~~PnGla~d~~~~~lY~aD~~~~~ 226 (349)
T 3v64_C 153 LLWQSLEK-PRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-IIADTH----LFWPNGLTIDYAGRRMYWVDAKHHV 226 (349)
T ss_dssp EECTTCSC-EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-ESCCSS----CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEeCCCCC-cceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-EEEECC----CCCcceEEEeCCCCEEEEEECCCCE
Confidence 31333344 789999996665555543 3 67888887643222 211111 22378999998776665553 688
Q ss_pred EEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482 168 AVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF 235 (327)
Q Consensus 168 i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 235 (327)
|..+|+........+. .......+++..+..+++-...+.|..++..+++....+.........+++.
T Consensus 227 I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~ 295 (349)
T 3v64_C 227 IERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTL 295 (349)
T ss_dssp EEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEE
T ss_pred EEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEEE
Confidence 9999987544333333 3456778888555677777788889988877777666665443444555554
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.88 E-value=1.4e-05 Score=64.23 Aligned_cols=230 Identities=8% Similarity=-0.029 Sum_probs=140.4
Q ss_pred EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCC---CeEEEeEEecccCCce
Q psy7482 26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGS---WQLEKLFKKAHKGTAV 101 (327)
Q Consensus 26 ~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~---~~~~~~~~~~~~~~~v 101 (327)
+|+.+. ...|+..|+...+....+. ....+..++|.+++..|+ +-..++.|..+++.. +.....+....... .
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~-p 79 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA-P 79 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC-C
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCC-c
Confidence 344444 3458888988766544443 344578999998665554 555568899999875 12222221222234 6
Q ss_pred eeEEEecCCCEEE-EEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c-C-CeEEEEEecCCc
Q psy7482 102 NHISIHPSGKLAL-SVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I-Q-NKAVVFSVEKAG 177 (327)
Q Consensus 102 ~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~-~~i~i~d~~~~~ 177 (327)
..+++.+.+..|+ +-...+.|.+.++........... . ......++++|.+..+..+ . . +.|..+++...
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~----~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~- 153 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-N----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV- 153 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-T----TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC-C----CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-
Confidence 8899987555554 445678899999875433222221 1 1237899999866544444 3 3 68888887543
Q ss_pred eeeEe-c-CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEeee---cccceEEEEEEecCCCcEEEEecCCC
Q psy7482 178 VLQTL-K-SESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIKA---SASRIKGLVFFSIPQETTVCTGNEES 250 (327)
Q Consensus 178 ~~~~~-~-~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~s~~~~~l~~~~~d~ 250 (327)
....+ . .-.....++++++ +.| ++-...+.|..+|+... ....+.. .......+++ ..+.++++-...+
T Consensus 154 ~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav---~~~~ly~~d~~~~ 229 (316)
T 1ijq_A 154 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAV---FEDKVFWTDIINE 229 (316)
T ss_dssp CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEE---ETTEEEEEETTTT
T ss_pred CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEE---ECCEEEEEECCCC
Confidence 33333 2 3456889999986 554 55566789999998643 3333321 1234567777 3466777777788
Q ss_pred eEEEEEcCCCceeEEeec
Q psy7482 251 AITAYNLTDGSHLWHIKA 268 (327)
Q Consensus 251 ~i~i~d~~~~~~~~~~~~ 268 (327)
.|..++..+++.+..+..
T Consensus 230 ~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 230 AIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp EEEEEETTTCCCCEEEEC
T ss_pred eEEEEeCCCCcceEEEec
Confidence 999999877776665543
No 272
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.88 E-value=3.3e-06 Score=70.00 Aligned_cols=213 Identities=7% Similarity=-0.039 Sum_probs=132.1
Q ss_pred cEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCeEEEe
Q psy7482 16 SVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKL 91 (327)
Q Consensus 16 ~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~ 91 (327)
.+..++| ++.++++-...+.|..+++........+.........+++.+.+. +.++-...+.|.+.++........
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l 196 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 196 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEE
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEe
Confidence 4566777 344555556678888888875543333322223456788887544 445555567888888764433322
Q ss_pred EEecccCCceeeEEEecCCCEEEEEeC-C-CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCe
Q psy7482 92 FKKAHKGTAVNHISIHPSGKLALSVGK-D-KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNK 167 (327)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~ 167 (327)
+ ...... ...+++.|.+..|+.+.. . +.|..+++......... ... ......++++|++..|..+. .+.
T Consensus 197 ~-~~~l~~-P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~~----~~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 197 L-WQSLEK-PRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA-DTH----LFWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp E-CSSCSC-EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSS----CSCEEEEEEEGGGTEEEEEETTTTE
T ss_pred e-cCCCCC-CcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE-ECC----CCCeeeEEEeCCCCEEEEEECCCCE
Confidence 3 333344 789999987666665543 3 67888887643322221 111 12378999998766555553 788
Q ss_pred EEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482 168 AVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF 235 (327)
Q Consensus 168 i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 235 (327)
|..+|+........+. .......+++..+..+++....+.|..++..+++.+..+.........+++.
T Consensus 270 I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~ 338 (386)
T 3v65_B 270 IERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTL 338 (386)
T ss_dssp EEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEE
T ss_pred EEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEEE
Confidence 9999986544333333 3456778888655777787888899999977777766665444445555554
No 273
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.87 E-value=1.1e-05 Score=62.11 Aligned_cols=202 Identities=12% Similarity=0.158 Sum_probs=129.6
Q ss_pred cccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcC
Q psy7482 50 LMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (327)
Q Consensus 50 ~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 128 (327)
+.+-...+..++|.|++..|+ +...++.|...|.. ++....+....... .-.+++.+++.++++.-.++.+.++++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D-~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKD-LETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSS-EEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCC-hHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 445556799999999766555 56778889999998 88888774433344 7889999888776766567889999876
Q ss_pred CCce---eeeeeccc-cCccccceEEEEEccCCcEEEeec-CCeEEEEEecC---CceeeEec--------CCCceeEEE
Q psy7482 129 KGRS---AYITNLSS-YGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEK---AGVLQTLK--------SESKVHSVC 192 (327)
Q Consensus 129 ~~~~---~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~---~~~~~~~~--------~~~~i~~~~ 192 (327)
.... .....+.. ..........++|+|.++.|.++. .....+|.... ...+..+. ....+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5442 12222211 111233478999999986665554 33334444431 11122221 234578999
Q ss_pred eecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecc---------cceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482 193 FLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASA---------SRIKGLVFFSIPQETTVCTGNEESAITAYNL 257 (327)
Q Consensus 193 ~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~ 257 (327)
++|. .+++.......+..+|.. ++.+..+.-.. .....|+| +++|+..++ ++.+.++.|.-
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~--d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAM--DASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEE--CTTCCEEEE-ETTTEEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEE--CCCCCEEEE-cCCceEEEEEe
Confidence 9997 466777788889999965 55655543221 25678999 488875444 66677777654
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.86 E-value=2.8e-06 Score=76.81 Aligned_cols=192 Identities=13% Similarity=0.047 Sum_probs=113.0
Q ss_pred cEEEEEEC-CCCCeEEEecC-C----CcEEEEEcCCC-eEEEe-EEecccCCceeeEEEecCCCEEEEEeCC-----CCE
Q psy7482 56 TITCLKFT-PEGSHLISCSD-D----GSIAIFRVGSW-QLEKL-FKKAHKGTAVNHISIHPSGKLALSVGKD-----KTL 122 (327)
Q Consensus 56 ~v~~~~~~-~~~~~l~~~~~-d----~~i~iw~~~~~-~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i 122 (327)
.+...+|| |||++||.+.. + ..|+++|+.++ +.+.. + . .. ...+.|+||++.|+....+ ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~-~---~~-~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV-S---GT-NGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE-E---EE-CSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc-c---Cc-eeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 67889999 99998885432 2 35999999988 63221 2 1 11 3467899999888877665 257
Q ss_pred EEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec----CCeEEEEEecCCc-ee--eEec--CCCceeEEEe
Q psy7482 123 RTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----QNKAVVFSVEKAG-VL--QTLK--SESKVHSVCF 193 (327)
Q Consensus 123 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~~~~-~~--~~~~--~~~~i~~~~~ 193 (327)
..+++.++............ ......+.|+|||++|+... ...|+++|+.++. .. ..+. ......++.|
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~--~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHN--PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM 327 (751)
T ss_dssp EEEETTSCGGGCEEEEECCC--TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred EEEECCCCchhcEEEEecCC--CceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence 88888776432111111110 11256789999999887654 3578889988752 22 3332 3344556665
Q ss_pred ecCceE-EEeCCC----CcEEEEEcCCCceeEE-eeeccc--ceEEEEEEecCCCcEEEEecCCCe--EEEEEc
Q psy7482 194 LNETTV-CTGNEE----SAITAYNLTDGSHLWQ-IKASAS--RIKGLVFFSIPQETTVCTGNEESA--ITAYNL 257 (327)
Q Consensus 194 ~~~~~l-~~~~~d----~~i~i~d~~~~~~~~~-~~~~~~--~v~~~~~~~s~~~~~l~~~~~d~~--i~i~d~ 257 (327)
+.++.| +....+ ..|..+|+.+...... +-.+.. .+..+.+ ..+.++++...++. |.++++
T Consensus 328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~---~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 328 HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV---RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE---CSSEEEEEEEETTEEEEEEEEC
T ss_pred eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE---ECCEEEEEEEeCCEEEEEEEec
Confidence 555444 443333 3566677664222222 222322 3445554 34556667777775 555665
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.86 E-value=2.4e-05 Score=65.12 Aligned_cols=215 Identities=10% Similarity=0.040 Sum_probs=135.9
Q ss_pred CccEEEEEe---CCCEEEEecCCCeEEEEEccccc----cccccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcCC
Q psy7482 14 TASVRSVAA---TSKLAASSGADETVVLYDMVKRK----QSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGS 85 (327)
Q Consensus 14 ~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~----~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~ 85 (327)
...+..|+| ++.++++-...+.|+.+++.... ....+.........+++.+. +++.++-...+.|.+.+++.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 345678888 34455555567888888876521 22222223345778888874 44555556678899999875
Q ss_pred CeEEEeEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP 163 (327)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 163 (327)
......+ ...... ...+++.|.+..|+.... .+.|...++.......... .. ......+++++++..|..+
T Consensus 191 ~~~~~l~-~~~~~~-P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~-~~----l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 191 VKRKTLF-RENGSK-PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-EN----IQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp CSEEEEE-ECSSCC-EEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC-SS----CSCEEEEEEETTTTEEEEE
T ss_pred CceEEEE-eCCCCC-cceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE-CC----CCceEEEEEEeCCCEEEEE
Confidence 5443333 333344 789999997666665543 3688888886433322221 11 1237899999877766665
Q ss_pred c--CCeEEEEEecCCceeeEec---CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482 164 I--QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF 235 (327)
Q Consensus 164 ~--~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 235 (327)
. .+.|..+|+.......... .-.....+++..+..+++-...+.|..+|..+++.+..+.........+...
T Consensus 264 D~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~ 340 (400)
T 3p5b_L 264 DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF 340 (400)
T ss_dssp ETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEE
T ss_pred ECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEE
Confidence 4 6889999987544333332 1245667888666777888888999999988887777766544445666554
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.85 E-value=1.8e-05 Score=63.61 Aligned_cols=203 Identities=10% Similarity=0.033 Sum_probs=124.8
Q ss_pred ccEEEEEe--C-CCEEEEecCCCeEEEEEccc----cccccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCC
Q psy7482 15 ASVRSVAA--T-SKLAASSGADETVVLYDMVK----RKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSW 86 (327)
Q Consensus 15 ~~v~~~~~--~-~~~l~~~~~dg~v~~w~~~~----~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~ 86 (327)
.....++| . +.++++-..++.|..+++.. ......+...-.....+++.+.+. +.++-...+.|.+.+....
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 34567888 3 34555666678999999875 222222222223457888886544 4455566789999998754
Q ss_pred eEEEeEEecccCCceeeEEEecCCCEEEEEeCC--CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD--KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI 164 (327)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 164 (327)
.....+ ...... ...+++.|.+..|+.+... +.|...++.. +....+.... ......++++|++..|..+.
T Consensus 110 ~~~~~~-~~~~~~-P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~----~~~P~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 110 KRKTLF-RENGSK-PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTEN----IQWPNGITLDLLSGRLYWVD 182 (316)
T ss_dssp SEEEEE-ECTTCC-EEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSS----CSCEEEEEEETTTTEEEEEE
T ss_pred ceEEEE-ECCCCC-cceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECC----CCCceEEEEeccCCEEEEEE
Confidence 333333 333344 7899999966666655543 6788888753 3322221111 12378999998776665554
Q ss_pred --CCeEEEEEecCCceeeEec---CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee
Q psy7482 165 --QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA 224 (327)
Q Consensus 165 --~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 224 (327)
.+.|..+|+.......... .......+++..+..+++-...+.|..++..+++.+..+..
T Consensus 183 ~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 183 SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred CCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEec
Confidence 6799999987433222222 22456788886656777777888999999877776666543
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.84 E-value=2.7e-05 Score=64.85 Aligned_cols=241 Identities=7% Similarity=-0.022 Sum_probs=147.6
Q ss_pred EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEe-cCCCcEEEEEcCCC----eEEEeEEecccCCc
Q psy7482 26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSW----QLEKLFKKAHKGTA 100 (327)
Q Consensus 26 ~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~----~~~~~~~~~~~~~~ 100 (327)
+|+.+. ...|+..++........+. ....+..++|.+.+..|+.+ ...+.|..+++... .....+ ......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~~- 160 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQA- 160 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE-CSSCSC-
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE-eCCCCC-
Confidence 444443 4678888887654433333 34568899999866555544 45678888888652 222222 223334
Q ss_pred eeeEEEecCCCEE-EEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---CCeEEEEEecCC
Q psy7482 101 VNHISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKA 176 (327)
Q Consensus 101 v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~ 176 (327)
...+++.+.+..| ++-...+.|.+.+++.......... . ......++++|.+..|..+. .+.|...++...
T Consensus 161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-~----~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-N----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-S----SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-C----CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 7889999844444 4445578899999875543333221 1 12378999999665555443 367888887654
Q ss_pred ceeeEec-CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEeee--cccceEEEEEEecCCCcEEEEecCCCe
Q psy7482 177 GVLQTLK-SESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIKA--SASRIKGLVFFSIPQETTVCTGNEESA 251 (327)
Q Consensus 177 ~~~~~~~-~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~s~~~~~l~~~~~d~~ 251 (327)
....... .-.....++++++ +.| ++-...+.|..+|+........... .......+++ ..+.++++-...+.
T Consensus 236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v---~~~~lywtd~~~~~ 312 (400)
T 3p5b_L 236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV---FEDKVFWTDIINEA 312 (400)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE---ETTEEEEEESSSCS
T ss_pred ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE---eCCEEEEecCCCCe
Confidence 4333333 3367889999986 554 4555678899999864433222222 2234456776 35566677777788
Q ss_pred EEEEEcCCCceeEEeecccCceEEEee
Q psy7482 252 ITAYNLTDGSHLWHIKASASRIKGLAS 278 (327)
Q Consensus 252 i~i~d~~~~~~~~~~~~~~~~v~~~~~ 278 (327)
|..+|..+++.+..+........++..
T Consensus 313 V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 313 IFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp EEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred EEEEEcCCCCceEEEecCCCCCceEEE
Confidence 999998888877766654444555543
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.84 E-value=1.1e-05 Score=62.16 Aligned_cols=194 Identities=12% Similarity=0.209 Sum_probs=129.3
Q ss_pred cccCCceeeEEEecCCCEEE-EEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482 95 AHKGTAVNHISIHPSGKLAL-SVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS 172 (327)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d 172 (327)
+-... +..++|+|++..|+ +...++.|...|.. ++....+++... .....+++.+++.++++.. ++.+.+++
T Consensus 24 g~~~~-lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~----~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 24 GITNN-ISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV----KDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp TCCSC-EEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC----SSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred CcccC-cceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC----CChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 44455 99999999766555 46778889999987 877777766432 2378889999888766654 78899998
Q ss_pred ecCCce---eeEec-------CCCceeEEEeecC-ceEEEeCCCCcEEEEEcC---CCceeEEee-------ecccceEE
Q psy7482 173 VEKAGV---LQTLK-------SESKVHSVCFLNE-TTVCTGNEESAITAYNLT---DGSHLWQIK-------ASASRIKG 231 (327)
Q Consensus 173 ~~~~~~---~~~~~-------~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~---~~~~~~~~~-------~~~~~v~~ 231 (327)
+..... ..... .+.....++++|+ +.|+++.+.....+|.++ ....+..+. .+...+.+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 865442 22221 2345689999998 677777766555666554 111122221 12335688
Q ss_pred EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc---------CceEEEeeeC-cEEEEEecCCcEEEEE
Q psy7482 232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA---------SRIKGLASHR-NHLICITSAGDLVVWE 296 (327)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~~~-~~l~~~~~dg~v~iw~ 296 (327)
+++.+ ..+++++.......+..+|.. ++.+..+.-.. .....|+|.+ ..|+..++.+.++.+.
T Consensus 178 l~~dp-~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 178 AEFNQ-QKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT 250 (255)
T ss_dssp EEEET-TTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred EEEcC-CCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence 99985 667788888888999999965 55555444321 2568899999 5566667777555554
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.80 E-value=2.2e-05 Score=63.11 Aligned_cols=212 Identities=11% Similarity=0.004 Sum_probs=132.7
Q ss_pred cEEEEEe---CCCEEEEecCCCeEEEEEcccccccc-ccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcCCCeEEE
Q psy7482 16 SVRSVAA---TSKLAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQLEK 90 (327)
Q Consensus 16 ~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~ 90 (327)
.+.+++| ++.++.+-...+.|..+++....... .+...-.....+++.+. +++.++-...+.|.+++++... ..
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~ 114 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RK 114 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EE
Confidence 3556777 35566666677889999887653221 22222234567888874 4455555667789999987533 33
Q ss_pred eEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CC
Q psy7482 91 LFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QN 166 (327)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~ 166 (327)
.+....... ...+++.|.+..|+.+.. .+.|...++.... ...+.... ......++++|++..|..+. .+
T Consensus 115 ~l~~~~~~~-P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~----l~~Pnglavd~~~~~lY~aD~~~~ 188 (318)
T 3sov_A 115 VLFWQELDQ-PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSE----IYWPNGLTLDYEEQKLYWADAKLN 188 (318)
T ss_dssp EEECSSCSS-EEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSS----CSCEEEEEEETTTTEEEEEETTTT
T ss_pred EEEeCCCCC-ccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECC----CCCccEEEEeccCCEEEEEECCCC
Confidence 331333444 789999997666666553 5778888875332 22221111 12378999999766665553 78
Q ss_pred eEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482 167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF 234 (327)
Q Consensus 167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 234 (327)
.|..+|+.......... .......+++..+..+++-...+.|..++..+++....+........+++.
T Consensus 189 ~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v 257 (318)
T 3sov_A 189 FIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHA 257 (318)
T ss_dssp EEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEE
T ss_pred EEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEE
Confidence 99999987543333333 345667888876677888888899999998888766665543333444544
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.79 E-value=3.3e-05 Score=64.92 Aligned_cols=151 Identities=11% Similarity=0.113 Sum_probs=97.0
Q ss_pred cEEEEEECC-CCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC-C----CEEEEEcCC
Q psy7482 56 TITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-K----TLRTWNLVK 129 (327)
Q Consensus 56 ~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g----~i~iwd~~~ 129 (327)
....++++| ++..|+.+...+.|+.+|+..+...... . .... ...++|+++++.|+.+... + .+..++. .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~-~~~~-P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-S-GLSK-VRTICWTHEADSMIITNDQNNNDRPNNYILTR-E 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-C-CCSC-EEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-G
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-c-CCCC-cceEEEeCCCCEEEEEeCCCCcccceEEEEeC-C
Confidence 356889998 4556666665578999999876655444 2 3334 8899999999966666542 2 2333443 3
Q ss_pred CceeeeeeccccCccccceEEEEEcc-CCcEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeecC-c-eEEEeC
Q psy7482 130 GRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-T-TVCTGN 203 (327)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~-~l~~~~ 203 (327)
+.......+.. ......++++| ++.++++-. ++.|..++...+....... .......++++|+ + ++++-.
T Consensus 214 g~~~~~~~l~~----~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 214 SGFKVITELTK----GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp GTSCSEEEEEE----CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred Cceeeeeeecc----CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 33221111111 11267889999 666666654 7899999988765433332 3345789999998 5 455666
Q ss_pred CCCcEEEEEcC
Q psy7482 204 EESAITAYNLT 214 (327)
Q Consensus 204 ~d~~i~i~d~~ 214 (327)
..+.|..++..
T Consensus 290 ~~~~I~~~~~d 300 (430)
T 3tc9_A 290 NQHYILRSDYD 300 (430)
T ss_dssp TTTEEEEEEEE
T ss_pred CCCEEEEEeCC
Confidence 78889998765
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.76 E-value=1.1e-05 Score=64.57 Aligned_cols=196 Identities=13% Similarity=0.265 Sum_probs=124.5
Q ss_pred CCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC----CC---EEEEEeC---CCCEEEEEcC--CCcee
Q psy7482 66 GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS----GK---LALSVGK---DKTLRTWNLV--KGRSA 133 (327)
Q Consensus 66 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---dg~i~iwd~~--~~~~~ 133 (327)
..+++.....+-+.+||+ +|+.+..+ .. +. ++.+..-|+ ++ ++++... +++|.+|++. +++ +
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~-~~--g~-~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSY-NT--GK-LNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEE-CC--SC-EEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEc-cC--CC-cccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence 345666667788999999 78888877 32 33 677776663 22 2333333 4789999773 333 2
Q ss_pred eeeecc--ccCccccceEEEEE--ccC-Cc-EEEee-cCCeEEEEEec-------CCceeeEecCCCceeEEEeecC-ce
Q psy7482 134 YITNLS--SYGVGFENLDSVVW--SPE-GL-LYAIP-IQNKAVVFSVE-------KAGVLQTLKSESKVHSVCFLNE-TT 198 (327)
Q Consensus 134 ~~~~~~--~~~~~~~~v~~~~~--~~~-~~-~l~~~-~~~~i~i~d~~-------~~~~~~~~~~~~~i~~~~~~~~-~~ 198 (327)
...... ........+..+++ +|. ++ ++.+. .+|.+..|++. +.+.++++...+.+..+...+. +.
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGR 193 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCe
Confidence 222110 00001123666777 774 44 33333 48999999883 3466778887888999999987 89
Q ss_pred EEEeCCCCcEEEEEcC-----CCceeEEee-ec-ccceEEEEEEecCCCc-EEEEec-CCCeEEEEEcC-CCceeEEee
Q psy7482 199 VCTGNEESAITAYNLT-----DGSHLWQIK-AS-ASRIKGLVFFSIPQET-TVCTGN-EESAITAYNLT-DGSHLWHIK 267 (327)
Q Consensus 199 l~~~~~d~~i~i~d~~-----~~~~~~~~~-~~-~~~v~~~~~~~s~~~~-~l~~~~-~d~~i~i~d~~-~~~~~~~~~ 267 (327)
|+.+-++.-|..|+.+ +++.+..+. ++ ...+..|++.+.++++ +|++++ .++...+||.. +.+.+..+.
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 9999998777777755 234454442 22 2367888886435555 565555 56799999996 666776664
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.72 E-value=2.1e-06 Score=76.45 Aligned_cols=236 Identities=11% Similarity=0.049 Sum_probs=133.6
Q ss_pred EEEECC-CCCeEEEecCCC-----------cEEEEEcCCCeEEE--eEEecccCCceeeEEEecCCCEEEEEeC-CCCEE
Q psy7482 59 CLKFTP-EGSHLISCSDDG-----------SIAIFRVGSWQLEK--LFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLR 123 (327)
Q Consensus 59 ~~~~~~-~~~~l~~~~~d~-----------~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~ 123 (327)
++++.+ +++.++.|+.+. .+.+||..+++... .+...+... ..++++..++++++.|+. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~-~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF-CPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS-SCEEEECTTSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCc-cccccCCCCCCEEEeCCCCCCceE
Confidence 456667 788888887543 58899988765433 221222222 345677889999999884 46899
Q ss_pred EEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C-----CeEEEEEecCCceeeEe-----cCCCceeEE
Q psy7482 124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-----NKAVVFSVEKAGVLQTL-----KSESKVHSV 191 (327)
Q Consensus 124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-----~~i~i~d~~~~~~~~~~-----~~~~~i~~~ 191 (327)
+||..+.+......++... .-.+++..+++++++.|+ + ..+.+||..+.+-...- .....-...
T Consensus 269 ~yd~~t~~W~~~~~~~~~R----~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~ 344 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVAR----GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQG 344 (656)
T ss_dssp EEEGGGTEEEECCCCSSCC----SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTG
T ss_pred EecCcCCceeECCCCCccc----cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccc
Confidence 9999887655443322221 123556667888888876 3 46899999876533220 000000001
Q ss_pred EeecC-ceEEEeCC---------CCcEEEEEcCCCceeEEeeeccc---------ceEEEEEEecCCCcEEEEecCCC--
Q psy7482 192 CFLNE-TTVCTGNE---------ESAITAYNLTDGSHLWQIKASAS---------RIKGLVFFSIPQETTVCTGNEES-- 250 (327)
Q Consensus 192 ~~~~~-~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~---------~v~~~~~~~s~~~~~l~~~~~d~-- 250 (327)
.+..+ ..++.|+. ...+..||..+.........+.. .-.++.+. ..++++++.|+.++
T Consensus 345 ~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~-~~~~~i~v~GG~~~~~ 423 (656)
T 1k3i_A 345 LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD-AVKGKILTFGGSPDYQ 423 (656)
T ss_dssp GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE-TTTTEEEEECCBSSSS
T ss_pred eeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEecc-CCCCeEEEEeCCCCCC
Confidence 11122 33344433 34577888877654332222111 12333332 14788888888543
Q ss_pred ---------eEEEEEcCCCceeEEe--ecccCce-EEEeeeC--cEEEEEecC-----------CcEEEEEccCc
Q psy7482 251 ---------AITAYNLTDGSHLWHI--KASASRI-KGLASHR--NHLICITSA-----------GDLVVWELNED 300 (327)
Q Consensus 251 ---------~i~i~d~~~~~~~~~~--~~~~~~v-~~~~~~~--~~l~~~~~d-----------g~v~iw~~~~~ 300 (327)
.+.+||..+.+-.... ..+.... .+.+..+ ++++.|+.+ ..+.+||..+.
T Consensus 424 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 424 DSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp SSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred CCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 6788887766533322 1122222 2333333 888888764 45899998776
No 283
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.70 E-value=3.3e-05 Score=62.44 Aligned_cols=230 Identities=13% Similarity=0.098 Sum_probs=125.7
Q ss_pred CccEEEEEeCCCEEEEecCCCeEEEEEccccccccccc---cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE
Q psy7482 14 TASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALM---QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (327)
Q Consensus 14 ~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~ 90 (327)
...+.++.++++.++.++.++.|.. ....++.-.... .+...+..+.+.+++..++.+. +|.|.. ..+.++.-.
T Consensus 79 ~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~tW~ 155 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYR-TKDSGKNWQ 155 (327)
T ss_dssp CCEEEEEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEE-ESSTTSSEE
T ss_pred CccEEEEEecCCeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEE-EcCCCCCCE
Confidence 4468888884344444555675544 222233211111 2334577788777776666554 554322 222333333
Q ss_pred eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEE
Q psy7482 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVV 170 (327)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i 170 (327)
......... +..+.+.+++.+++.+. +|.+..-+-..++.-....... ...+..+.+.+++.+++++.+|.+++
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~----~~~~~~~~~~~~g~~~~~~~~G~~~~ 229 (327)
T 2xbg_A 156 ALVQEAIGV-MRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTT----SRRLHNMGFTPDGRLWMIVNGGKIAF 229 (327)
T ss_dssp EEECSCCCC-EEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEECCS----SSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred EeecCCCcc-eEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCCCC----CCccceeEECCCCCEEEEeCCceEEE
Confidence 332334444 88999999888776654 4555443211122222221111 12388899999999888887888777
Q ss_pred EEecCCceeeEec-----CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee---cccceEEEEEEecCCCcE
Q psy7482 171 FSVEKAGVLQTLK-----SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA---SASRIKGLVFFSIPQETT 242 (327)
Q Consensus 171 ~d~~~~~~~~~~~-----~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~s~~~~~ 242 (327)
.+...++.-..+. ....+.++.+.+++.+++++.++.+ .+....++.-..+.. ....+..+.|. +++.
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~--~~~~- 305 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFF--SPDQ- 305 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEE--ETTE-
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEE--CCCc-
Confidence 6433344333332 1235788888877555555557766 344444543333321 23467888884 3444
Q ss_pred EEEecCCCeEEEEE
Q psy7482 243 VCTGNEESAITAYN 256 (327)
Q Consensus 243 l~~~~~d~~i~i~d 256 (327)
+++++.+|.|.-++
T Consensus 306 ~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 306 GFILGQKGILLRYV 319 (327)
T ss_dssp EEEECSTTEEEEEC
T ss_pred eEEEcCCceEEEEc
Confidence 55666788777665
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.70 E-value=3.1e-05 Score=65.13 Aligned_cols=232 Identities=10% Similarity=0.092 Sum_probs=130.9
Q ss_pred cEEEEEeC----CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---Cc-EEEEEcCCCe
Q psy7482 16 SVRSVAAT----SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GS-IAIFRVGSWQ 87 (327)
Q Consensus 16 ~v~~~~~~----~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~-i~iw~~~~~~ 87 (327)
....|+++ +..|+.+...+.|+.+|..+++...... .......++++++++++++-... .. +...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 45577774 2455555544889999987776544333 44568899999999944443311 11 3333332211
Q ss_pred E-EEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCcee-eeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482 88 L-EKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSA-YITNLSSYGVGFENLDSVVWSPEGLLYAIPI 164 (327)
Q Consensus 88 ~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 164 (327)
. ...+ ..... ...++++| ++.+.++-..++.|+.+|..++... ........ .....++|+|+++.|.++.
T Consensus 219 ~~~~~~--~~~~~-P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~----~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 219 TERLSL--CNARG-AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTK----GSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp CCEEEE--EECSS-BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCC----SSCEEEEECTTSSEEEEEE
T ss_pred eccccc--cccCC-CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCC----CCcccEEEeCCCCEEEEEe
Confidence 1 1122 12233 67789999 6665555556788999998867652 22222111 1134699999998555543
Q ss_pred --CCeEEEEEecC--Cce--eeEec-C---------------CCceeEEEe---------ecCc-eEEEeCCCCcEEEEE
Q psy7482 165 --QNKAVVFSVEK--AGV--LQTLK-S---------------ESKVHSVCF---------LNET-TVCTGNEESAITAYN 212 (327)
Q Consensus 165 --~~~i~i~d~~~--~~~--~~~~~-~---------------~~~i~~~~~---------~~~~-~l~~~~~d~~i~i~d 212 (327)
.+.|+.++... +.. ...+. . -.....+++ .+++ ++++-...+.|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 68899988652 221 11111 0 123667888 5564 455556677898888
Q ss_pred cCCCceeEEeeec------------------ccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482 213 LTDGSHLWQIKAS------------------ASRIKGLVFFSIPQETTVCTGNEESAITAYNLT 258 (327)
Q Consensus 213 ~~~~~~~~~~~~~------------------~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~ 258 (327)
. ++. +.++.+. -.....+++.+ +++.++++-...+.|+.++++
T Consensus 372 ~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~-~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 372 P-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDM-KRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp T-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEET-TTTEEEEEEGGGTEEEEEEEC
T ss_pred C-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEEC-CCCEEEEEeCCCCEEEEEecC
Confidence 4 453 3333221 11245667631 455555555555666666543
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.69 E-value=0.00017 Score=65.09 Aligned_cols=230 Identities=7% Similarity=-0.013 Sum_probs=138.6
Q ss_pred EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCC----eEEEeEEecccCCc
Q psy7482 26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSW----QLEKLFKKAHKGTA 100 (327)
Q Consensus 26 ~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~~~ 100 (327)
+|+.+. ...|+..++........+. ....+..++|.+.+..| ++-...+.|+.+++... .....+ ......
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi-~~~l~~- 472 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQA- 472 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-CSSCSC-
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE-ecCCCC-
Confidence 444443 3557777776554433333 34567889999855544 45555678888888653 222222 223344
Q ss_pred eeeEEEecCCCEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C-CeEEEEEecCC
Q psy7482 101 VNHISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-NKAVVFSVEKA 176 (327)
Q Consensus 101 v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-~~i~i~d~~~~ 176 (327)
...|++.+.++.|+.+ ...+.|.+.++.......... .. ......|++.|.+..|..+. . +.|...++...
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-~~----l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-EN----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CT----TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-CC----CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 7889999877555544 457889999987544322222 11 12388999999755554443 3 68888888655
Q ss_pred ceeeEec-CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEeeec--ccceEEEEEEecCCCcEEEEecCCCe
Q psy7482 177 GVLQTLK-SESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIKAS--ASRIKGLVFFSIPQETTVCTGNEESA 251 (327)
Q Consensus 177 ~~~~~~~-~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~s~~~~~l~~~~~d~~ 251 (327)
.....+. .-.....|++++. +.| ++-...+.|..+++........+... -.....|++ ..+.++++-...+.
T Consensus 548 ~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav---~~~~lYwtD~~~~~ 624 (791)
T 3m0c_C 548 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV---FEDKVFWTDIINEA 624 (791)
T ss_dssp CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE---ETTEEEEEETTTTE
T ss_pred ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE---eCCEEEEEECCCCE
Confidence 4444443 3367889999976 554 44456678999998644333333321 223456666 34566666667788
Q ss_pred EEEEEcCCCceeEEee
Q psy7482 252 ITAYNLTDGSHLWHIK 267 (327)
Q Consensus 252 i~i~d~~~~~~~~~~~ 267 (327)
|...|..+++.+..+.
T Consensus 625 I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 625 IFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEEETTTCCCCEEEE
T ss_pred EEEEeCCCCcceEEee
Confidence 9988887776655554
No 286
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=0.0001 Score=61.88 Aligned_cols=151 Identities=13% Similarity=0.120 Sum_probs=93.4
Q ss_pred cEEEEEeC---CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC-CC----cEEEEEcCCCe
Q psy7482 16 SVRSVAAT---SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-DG----SIAIFRVGSWQ 87 (327)
Q Consensus 16 ~v~~~~~~---~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~i~iw~~~~~~ 87 (327)
....|+++ +..|+.+...+.|+.+|+..++..... ........++|+++++.|+++.. ++ .+...+. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 34566664 345555554478889998766543333 34456889999999996666554 22 2333443 332
Q ss_pred EE--EeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-
Q psy7482 88 LE--KLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP- 163 (327)
Q Consensus 88 ~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 163 (327)
.. ..+ . .... ...++++| ++.++++-..++.|..++...+........... .....++|+|+++.|.++
T Consensus 216 ~~~~~~l-~-~~~~-p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~----~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 216 FKVITEL-T-KGQN-CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDS----GWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp SCSEEEE-E-ECSS-CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSS----SCCEEEEECTTSSEEEEEE
T ss_pred eeeeeee-c-cCCC-ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCC----CcceeEEEcCCCCEEEEEE
Confidence 22 233 1 2233 67889999 666666655678999999876654233222221 237789999999955544
Q ss_pred c-CCeEEEEEecC
Q psy7482 164 I-QNKAVVFSVEK 175 (327)
Q Consensus 164 ~-~~~i~i~d~~~ 175 (327)
. .+.|..++...
T Consensus 289 ~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 289 VNQHYILRSDYDW 301 (430)
T ss_dssp TTTTEEEEEEEET
T ss_pred CCCCEEEEEeCCc
Confidence 3 78999988763
No 287
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.61 E-value=0.00017 Score=60.65 Aligned_cols=196 Identities=9% Similarity=0.101 Sum_probs=116.6
Q ss_pred cEEEEEECCC--CCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC-----CEEEEEcC
Q psy7482 56 TITCLKFTPE--GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK-----TLRTWNLV 128 (327)
Q Consensus 56 ~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~ 128 (327)
....++|.|+ +..|+.+...+.|+.+|..+++..... ..... ...++++++++ |+.+...+ .+...+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~--~~~~~-P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT--TNIGQ-CADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC--CCCSC-EEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee--cCCCC-ccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 3568999984 445555554488999999877765544 23334 88999999999 55444322 13333332
Q ss_pred CCceeeeeeccccCccccceEEEEEcc-CCcEEEeec-CCeEEEEEecCCceeeEe-c--CCCceeEEEeecC-c-eEEE
Q psy7482 129 KGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKAGVLQTL-K--SESKVHSVCFLNE-T-TVCT 201 (327)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~-~--~~~~i~~~~~~~~-~-~l~~ 201 (327)
.+. ........ ......++++| ++.++++.. ++.|+.+|..++.....+ . .......++++|+ + ++++
T Consensus 216 ~~~-~~~~~~~~----~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 216 SGF-TERLSLCN----ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp GTT-CCEEEEEE----CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred CCe-eccccccc----cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 211 10001111 12266788999 666666654 788999998877653322 2 2223346999998 5 4556
Q ss_pred eCCCCcEEEEEcCC--Cce--eEEeeec---------------ccceEEEEEEe-------cCCCcEEEEecCCCeEEEE
Q psy7482 202 GNEESAITAYNLTD--GSH--LWQIKAS---------------ASRIKGLVFFS-------IPQETTVCTGNEESAITAY 255 (327)
Q Consensus 202 ~~~d~~i~i~d~~~--~~~--~~~~~~~---------------~~~v~~~~~~~-------s~~~~~l~~~~~d~~i~i~ 255 (327)
-...+.|+.++... +.. ...+.+. -.....+++.. .+++.++++-...+.|+.+
T Consensus 291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~ 370 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL 370 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred eCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence 66778899988652 221 1122221 11245677721 1567777777777889999
Q ss_pred EcCCCc
Q psy7482 256 NLTDGS 261 (327)
Q Consensus 256 d~~~~~ 261 (327)
+. ++.
T Consensus 371 ~~-~G~ 375 (433)
T 4hw6_A 371 TP-EGR 375 (433)
T ss_dssp CT-TSE
T ss_pred CC-CCC
Confidence 84 553
No 288
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.59 E-value=0.00023 Score=64.33 Aligned_cols=213 Identities=9% Similarity=0.020 Sum_probs=130.1
Q ss_pred ccEEEEEe---CCCEEEEecCCCeEEEEEcccc----ccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCC
Q psy7482 15 ASVRSVAA---TSKLAASSGADETVVLYDMVKR----KQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSW 86 (327)
Q Consensus 15 ~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~ 86 (327)
..+..|++ ++.++++-...+.|+.+++... .....+.........|++.+.++.| ++-...+.|.+.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 44667777 3445556666778888887642 2222222233456678888766544 45566788999998754
Q ss_pred eEEEeEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI 164 (327)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 164 (327)
.. ..+....... ...|++.|.+..|+.+.. .+.|...++......... ... ......|++++.+..|..+.
T Consensus 504 ~~-~~l~~~~l~~-P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv-~~~----l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 504 KR-KTLFRENGSK-PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TEN----IQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp SE-EEEEECTTCC-EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-CSS----CSCEEEEEEETTTTEEEEEE
T ss_pred eE-EEEEeCCCCC-cceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE-eCC----CCCceEEEEecCCCeEEEEe
Confidence 43 3332333444 889999997666666553 267888888644332222 111 12388999998766665554
Q ss_pred --CCeEEEEEecCCceeeEecC---CCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482 165 --QNKAVVFSVEKAGVLQTLKS---ESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF 234 (327)
Q Consensus 165 --~~~i~i~d~~~~~~~~~~~~---~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 234 (327)
.+.|..+++........+.. -....+|++..+.++++-...+.|...|..+++.+..+.........|++
T Consensus 577 ~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v 651 (791)
T 3m0c_C 577 SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 651 (791)
T ss_dssp TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEE
T ss_pred CCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEee
Confidence 67899999865544443332 23456777766667777778888999988777665555433323334443
No 289
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.56 E-value=0.00035 Score=61.61 Aligned_cols=229 Identities=11% Similarity=0.040 Sum_probs=143.1
Q ss_pred EEEEecCCCeEEEEEccccccccccc-cccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEecccCCceee
Q psy7482 26 LAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH 103 (327)
Q Consensus 26 ~l~~~~~dg~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~ 103 (327)
+|+.+ ..+.|+..++.+......+. ..-..+..++|.+.+..|+ +-..++.|..+++........+ ...... ...
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~-~~g~~~-P~G 84 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVV-EFGLDY-PEG 84 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSC-CCE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEE-eCCCCC-cce
Confidence 44444 45679999987654332222 1234578999999666555 4456788998888755443333 222234 778
Q ss_pred EEEecCCCEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---CCeEEEEEecCCcee
Q psy7482 104 ISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVL 179 (327)
Q Consensus 104 ~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~ 179 (327)
+++.+.+..|+.+ ...+.|.+.++......... ... ......+++.|....|..+. .+.|...++......
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~-~~~----l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLV-WKD----LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEE-CSS----CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEE-eCC----CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 9998765555544 45678999998654322222 111 12378999998554444443 567888887655544
Q ss_pred eEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482 180 QTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNL 257 (327)
Q Consensus 180 ~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~ 257 (327)
.....-.....++++++ +. +++-...+.|..+|+..... ..+.........+++. .+..+++-...+.|...|.
T Consensus 160 ~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~---~~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 160 TLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQY---QDYIYWTDWSRRSIERANK 235 (628)
T ss_dssp EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEE---TTEEEEEETTTTEEEEEET
T ss_pred EEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEE---CCEEEEecCCCCEEEEEEC
Confidence 44445567889999986 54 45556778899999865443 3343333445678873 3566666666788999997
Q ss_pred CCCceeEEe
Q psy7482 258 TDGSHLWHI 266 (327)
Q Consensus 258 ~~~~~~~~~ 266 (327)
.+++....+
T Consensus 236 ~tg~~~~~l 244 (628)
T 4a0p_A 236 TSGQNRTII 244 (628)
T ss_dssp TTCCSCEEE
T ss_pred CCCCceEEE
Confidence 776544333
No 290
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.56 E-value=1.2e-05 Score=72.71 Aligned_cols=188 Identities=14% Similarity=0.146 Sum_probs=110.8
Q ss_pred eeeEEEe-cCCCEEEEEeC-CC----CEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEeec-C-----Ce
Q psy7482 101 VNHISIH-PSGKLALSVGK-DK----TLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-----NK 167 (327)
Q Consensus 101 v~~~~~~-~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~ 167 (327)
+....|+ |||++|+.+.. +| .|+++|+.++ +.+.. .+. .....+.|+||++.|+... + ..
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~------~~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVS------GTNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEE------EECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-ccc------CceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 7788999 99998876543 33 4999999988 63211 011 1134688999998776654 3 36
Q ss_pred EEEEEecCCce--eeEec--CCCceeEEEeecC-ceEEEeC---CCCcEEEEEcCCCc-ee--EEe-eecccceEEEEEE
Q psy7482 168 AVVFSVEKAGV--LQTLK--SESKVHSVCFLNE-TTVCTGN---EESAITAYNLTDGS-HL--WQI-KASASRIKGLVFF 235 (327)
Q Consensus 168 i~i~d~~~~~~--~~~~~--~~~~i~~~~~~~~-~~l~~~~---~d~~i~i~d~~~~~-~~--~~~-~~~~~~v~~~~~~ 235 (327)
|+.+++.++.. ...+. .......+.|+|| .+|+..+ ....|+++|+.++. .. ..+ ........++.|.
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~ 328 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH 328 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee
Confidence 78888876642 22222 3345678899999 5555433 34568888987752 22 333 3334455555542
Q ss_pred ecCCCcEEEEecCC----CeEEEEEcCCCceeEE-eecccC--ceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482 236 SIPQETTVCTGNEE----SAITAYNLTDGSHLWH-IKASAS--RIKGLASHR-NHLICITSAGDLVVWEL 297 (327)
Q Consensus 236 ~s~~~~~l~~~~~d----~~i~i~d~~~~~~~~~-~~~~~~--~v~~~~~~~-~~l~~~~~dg~v~iw~~ 297 (327)
.++.+++....+ ..|..+++.++..... +..+.. .+..+.+.. .++++...+|..++|-+
T Consensus 329 --~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 329 --GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp --TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred --eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEE
Confidence 344444454443 3677778765322222 223332 455666666 66777777887555443
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.55 E-value=7.8e-05 Score=59.70 Aligned_cols=189 Identities=14% Similarity=0.211 Sum_probs=121.0
Q ss_pred CEEEEecCCCeEEEEEccccccccccccccccEEEEEECCC----CC---e-EEEecC--CCcEEEEEcC--CCeEEEeE
Q psy7482 25 KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE----GS---H-LISCSD--DGSIAIFRVG--SWQLEKLF 92 (327)
Q Consensus 25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~-l~~~~~--d~~i~iw~~~--~~~~~~~~ 92 (327)
.+++.....+-+.+||+ +++.++.+.. +.++.+..-|+ |+ + +++.-. +++|.+|++. ++. +..+
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i 116 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM 116 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence 45555566788999999 8888888763 55677766652 22 2 233333 5789999773 333 3333
Q ss_pred Ee-----cccCCceeeEEE--ecC-CC-EEEEEeCCCCEEEEEcC-------CCceeeeeeccccCccccceEEEEEccC
Q psy7482 93 KK-----AHKGTAVNHISI--HPS-GK-LALSVGKDKTLRTWNLV-------KGRSAYITNLSSYGVGFENLDSVVWSPE 156 (327)
Q Consensus 93 ~~-----~~~~~~v~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 156 (327)
.. ......+..+++ +|. ++ ++++...+|.+..|++. +.+.+..+.+... +..+...+.
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq------~EgcvvDd~ 190 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ------TEGMAADDE 190 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC------EEEEEEETT
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC------cceEEEcCC
Confidence 11 011022777888 664 43 67888889999999983 2344455555443 888889988
Q ss_pred CcEEEeec-CCeEEEEEec-----CCceeeEecC---CCceeEEEee--cC--ceEEEeC-CCCcEEEEEcC-CCceeEE
Q psy7482 157 GLLYAIPI-QNKAVVFSVE-----KAGVLQTLKS---ESKVHSVCFL--NE--TTVCTGN-EESAITAYNLT-DGSHLWQ 221 (327)
Q Consensus 157 ~~~l~~~~-~~~i~i~d~~-----~~~~~~~~~~---~~~i~~~~~~--~~--~~l~~~~-~d~~i~i~d~~-~~~~~~~ 221 (327)
...|.++. +..|..|+.+ +++.+..+.. ...+..+++- ++ ++|++++ .++.+.+||.. +.+.+..
T Consensus 191 ~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~ 270 (355)
T 3amr_A 191 YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVAD 270 (355)
T ss_dssp TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEE
T ss_pred CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEE
Confidence 77777776 6667777755 3445555542 2468888885 33 4666665 67799999986 5555555
Q ss_pred ee
Q psy7482 222 IK 223 (327)
Q Consensus 222 ~~ 223 (327)
|.
T Consensus 271 f~ 272 (355)
T 3amr_A 271 FR 272 (355)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 292
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.52 E-value=0.00044 Score=60.97 Aligned_cols=194 Identities=6% Similarity=-0.034 Sum_probs=120.5
Q ss_pred ccEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEE
Q psy7482 15 ASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEK 90 (327)
Q Consensus 15 ~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~ 90 (327)
..+..|+| ++.++++-..++.|..+++........+.........+++.+.+..| ++-...+.|.+.++..... .
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~ 115 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-Q 115 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-E
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-E
Confidence 34667888 34555566677889888876543332333222346678887755544 5555577899999865432 3
Q ss_pred eEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CC
Q psy7482 91 LFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QN 166 (327)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~ 166 (327)
.+....... ...+++.|....|+.... .+.|...++.......... . ......+++++++..|..+. .+
T Consensus 116 ~l~~~~l~~-P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~--~----~~~P~GlalD~~~~~LY~aD~~~~ 188 (628)
T 4a0p_A 116 VLVWKDLDS-PRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP--N----VGRANGLTIDYAKRRLYWTDLDTN 188 (628)
T ss_dssp EEECSSCCC-EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--S----CSSEEEEEEETTTTEEEEEETTTT
T ss_pred EEEeCCCCC-cccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC--C----CCCcceEEEccccCEEEEEECCCC
Confidence 331233344 789999996556665553 4678888876444322221 1 22388999999876666654 78
Q ss_pred eEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCc
Q psy7482 167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGS 217 (327)
Q Consensus 167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 217 (327)
.|..+|+..... ..+. .......+++..+..+++-...+.|...|..+++
T Consensus 189 ~I~~~d~dG~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 189 LIESSNMLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEEEETTSCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEEcCCCCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence 899999876544 2332 3344567777766666666667777777765543
No 293
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.49 E-value=0.00092 Score=63.07 Aligned_cols=293 Identities=12% Similarity=0.073 Sum_probs=157.8
Q ss_pred ccEEEEEeCCCEEEEecCCCeEEEEEccccccccc-cccccccEEEEEECCC------CCeEEEecC-CCcEEEEEcCCC
Q psy7482 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGA-LMQHEGTITCLKFTPE------GSHLISCSD-DGSIAIFRVGSW 86 (327)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~-~~~~~~~v~~~~~~~~------~~~l~~~~~-d~~i~iw~~~~~ 86 (327)
..|...+.++.+++.+. ++.+.++++.+++.... -..-...|.|+++.|. ++++++|.. |++++|+++.+.
T Consensus 514 ~~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 514 KNISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp CCCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred CEEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence 35666666666776664 67888888765432211 1123567999999863 468999996 999999999877
Q ss_pred eEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcC--CCceeeeeeccccCccccceEEEEEccCC-cEEE
Q psy7482 87 QLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLV--KGRSAYITNLSSYGVGFENLDSVVWSPEG-LLYA 161 (327)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~ 161 (327)
+.+.....+.... ..++.+.. ...+|..|-.||.+.-+.++ +++........ .+..++.-..+...+ ..+.
T Consensus 593 ~~~~~~~L~~~~~-p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~---LG~~pv~L~~~~~~~~~~V~ 668 (1158)
T 3ei3_A 593 ELLHKEMLGGEII-PRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT---LGTQPTVLRTFRSLSTTNVF 668 (1158)
T ss_dssp CEEEEEECCSSCC-EEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEE---CCSSCCEEEEEESSSCEEEE
T ss_pred CeEEEEECCCCCC-CcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEE---cCCCceEEEEEeeCCceeEE
Confidence 6665442222222 45554443 34578889899988766554 44433221110 112234433343333 2333
Q ss_pred eecCCeEEEEEecCCceeeEecCCCcee-EEEeec----CceEEEeCCCCcEEEEEcCCCce--eEEeeecccceEEEEE
Q psy7482 162 IPIQNKAVVFSVEKAGVLQTLKSESKVH-SVCFLN----ETTVCTGNEESAITAYNLTDGSH--LWQIKASASRIKGLVF 234 (327)
Q Consensus 162 ~~~~~~i~i~d~~~~~~~~~~~~~~~i~-~~~~~~----~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~ 234 (327)
+.++.-..+|..+ ++....--....+. ...|+. ++.++ .+ ++.++|..+.+.+. +++++- ...+..+++
T Consensus 669 a~s~rp~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~g~v~-~~-~~~LrI~~i~~~~~~~~~~ipL-~~Tprri~y 744 (1158)
T 3ei3_A 669 ACSDRPTVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPDSLAL-AN-NSTLTIGTIDEIQKLHIRTVPL-YESPRKICY 744 (1158)
T ss_dssp EESSSCEEEEESS-SSEEEEEBSSSCCCEEEEECCSSSTTEEEE-EC-SSCEEEEEECCSSSEEEEEEEC-SSEEEEEEE
T ss_pred EECCCCEEEEEcC-CceEEeccChHHhceEeccCcccCCCcEEE-Ec-CCceEEEEecccCCeeEEEEeC-CCCceEEEE
Confidence 3344444444433 33222111222332 333432 23443 33 44588888754332 222322 234566666
Q ss_pred EecCCCcEEEEec-------------------------------------------------CCCeEEEEEcCCCceeEE
Q psy7482 235 FSIPQETTVCTGN-------------------------------------------------EESAITAYNLTDGSHLWH 265 (327)
Q Consensus 235 ~~s~~~~~l~~~~-------------------------------------------------~d~~i~i~d~~~~~~~~~ 265 (327)
+ |+.+.++.+. .-+.|++.|..+.+.+..
T Consensus 745 ~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~ 822 (1158)
T 3ei3_A 745 Q--EVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHA 822 (1158)
T ss_dssp E--GGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEE
T ss_pred c--CCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEE
Confidence 5 3333322211 013477888777776655
Q ss_pred eecc-cCceEEEe---eeC---cEEEEEe----------cCCcEEEEEccCccCCCceeeeecCCCCceEEEE
Q psy7482 266 IKAS-ASRIKGLA---SHR---NHLICIT----------SAGDLVVWELNEDVTREPQRVSATNDGCRFTCLA 321 (327)
Q Consensus 266 ~~~~-~~~v~~~~---~~~---~~l~~~~----------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~ 321 (327)
+.-. .+.+.+++ |.. .+++.|+ ..|.|++|++... +.+.+......+.+++|+
T Consensus 823 ~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~---kL~lv~~~~v~g~v~al~ 892 (1158)
T 3ei3_A 823 HQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG---KLQTVAEKEVKGAVYSMV 892 (1158)
T ss_dssp EECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETT---EEEEEEEEEESSCEEEEE
T ss_pred EeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECC---EEEEEEEEEcCCcCEEEe
Confidence 5422 23455554 332 6888876 3478999999844 555555555566777765
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.48 E-value=0.00057 Score=60.16 Aligned_cols=196 Identities=12% Similarity=0.031 Sum_probs=110.9
Q ss_pred ccEEEEEe--CCC-EEEEecCCCeEEEEEcccccc-ccccccccccEEEEEECCCCCe-EEEecCCCcEEEEEcCCCeEE
Q psy7482 15 ASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQ-SGALMQHEGTITCLKFTPEGSH-LISCSDDGSIAIFRVGSWQLE 89 (327)
Q Consensus 15 ~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iw~~~~~~~~ 89 (327)
.....|++ .++ ++++-...+.|..+++..... ...+...-.....+++.+.+.. .++-...+.|.+.++.... .
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-~ 118 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-R 118 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-C
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-E
Confidence 34567777 334 444544567788888765432 2222222356788999985554 4455567899999987543 3
Q ss_pred EeEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C
Q psy7482 90 KLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q 165 (327)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~ 165 (327)
..+....... ...+++.|.+..|+.... .+.|...++..... ..+.... ......+++++++..|..+. .
T Consensus 119 ~~l~~~~l~~-P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~----~~~P~Glald~~~~~LY~aD~~~ 192 (619)
T 3s94_A 119 KVLFWQELDQ-PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSE----IYWPNGLTLDYEEQKLYWADAKL 192 (619)
T ss_dssp EEEECSSCSC-CCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSS----CSSEEEEEEETTTTEEEEEETTT
T ss_pred EEEEeCCCCC-CceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEeCC----CCCCcEEEEEccCCEEEEEeCCC
Confidence 3331333444 789999997666665553 35677777653322 2221111 12378999999766665554 6
Q ss_pred CeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCc
Q psy7482 166 NKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGS 217 (327)
Q Consensus 166 ~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 217 (327)
+.|..+|+.......... .......+++..+..+++-...+.|...|..+++
T Consensus 193 ~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 193 NFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp CCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCC
T ss_pred CeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCc
Confidence 788888886544333222 1223345666666555565566777777765543
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.48 E-value=2.4e-06 Score=76.38 Aligned_cols=236 Identities=7% Similarity=-0.004 Sum_probs=136.9
Q ss_pred CCeEEEEEccccccccccccccccEEEEEECCCCCeEEEe-cCCCcEEEEEcCC----CeEEEeEEecccCCceeeEEEe
Q psy7482 33 DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGS----WQLEKLFKKAHKGTAVNHISIH 107 (327)
Q Consensus 33 dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~----~~~~~~~~~~~~~~~v~~~~~~ 107 (327)
.+.|+..++...+....+.. ...+..++|.+.+..|+.+ ...+.|+.+++.. ......+ ...... ...+++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i-~~~~~~-P~glavD 461 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQA-PDGLAVD 461 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC-CSCC---CCCEECC
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE-eCCCCC-cceEEEE
Confidence 35688888776654444433 2346688999876666655 4467899998875 2222222 111223 5678887
Q ss_pred cCC-CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C-CeEEEEEecCCceeeEec
Q psy7482 108 PSG-KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-NKAVVFSVEKAGVLQTLK 183 (327)
Q Consensus 108 ~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-~~i~i~d~~~~~~~~~~~ 183 (327)
+.+ +++++-...+.|.++++............ ......++++|.+..|..+. . +.|..+++........+.
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~-----~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~ 536 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQ-----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 536 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCS-----SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEEEeCC-----CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe
Confidence 644 44444445688999998754332222111 12267889999665444443 2 678877765433222222
Q ss_pred -CCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCceeEEee--ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482 184 -SESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGSHLWQIK--ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT 258 (327)
Q Consensus 184 -~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~ 258 (327)
.-.....|+++|+ + ++++-...+.|..+++........+. ........|++. . +.++++....+.|..++..
T Consensus 537 ~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd--~-~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 537 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--E-DKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEE--T-TEEEEECSTTTCEEEEETT
T ss_pred CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEE--C-CEEEEEeCCCCeEEEEEcc
Confidence 2345678999986 4 45566677889999986433222222 112234456663 3 4566666677899999988
Q ss_pred CCceeEEeecccCceEEEeee
Q psy7482 259 DGSHLWHIKASASRIKGLASH 279 (327)
Q Consensus 259 ~~~~~~~~~~~~~~v~~~~~~ 279 (327)
+++.+..+........+|++.
T Consensus 614 ~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 614 TGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp TEEEEECCCTTCSSCCCCCBC
T ss_pred CCCceEEeecCCCCCcEEEEe
Confidence 888777765443344555443
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.45 E-value=0.00045 Score=60.83 Aligned_cols=222 Identities=11% Similarity=0.035 Sum_probs=125.0
Q ss_pred CCeEEEEEccccc-cccccccccccEEEEEECCCCCeEEEe-cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC
Q psy7482 33 DETVVLYDMVKRK-QSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG 110 (327)
Q Consensus 33 dg~v~~w~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 110 (327)
...|+..++.... ....+...-.....++|++.+..|+.+ ...+.|..++++.......+....... ...+++.+.+
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~-P~GlAvD~~~ 95 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS-PDGLACDWLG 95 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSC-EEEEEEETTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCC-cCeEEEEecC
Confidence 4567888876543 122222233457899999866666654 446788888887543222221222244 8899999865
Q ss_pred CEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---CCeEEEEEecCCceeeEec-CC
Q psy7482 111 KLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVLQTLK-SE 185 (327)
Q Consensus 111 ~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~~~~~-~~ 185 (327)
..|+.+ ...+.|.+.++......... ... ......+++.|.+..|..+. .+.|...++.......... .-
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~-~~~----l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~ 170 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLF-WQE----LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI 170 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEE-CSS----CSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSC
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEE-eCC----CCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCC
Confidence 555554 45688999998754332222 111 12377899999755444443 4577777765433333332 34
Q ss_pred CceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCcee
Q psy7482 186 SKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHL 263 (327)
Q Consensus 186 ~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~ 263 (327)
.....++++++ +. +++-...+.|..+|+..........+.......+++. .+..+++-...+.|...|..+++..
T Consensus 171 ~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~---~~~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 171 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF---EDILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEES---SSEEEEECTTTCSEEEEESSSCCCC
T ss_pred CCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEe---CCEEEEecCCCCEEEEEECCCCccc
Confidence 56889999986 54 4555667889999886543322222122223566762 3355556666788999998776543
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.44 E-value=0.00024 Score=56.54 Aligned_cols=228 Identities=14% Similarity=0.142 Sum_probs=121.4
Q ss_pred eCCCEEEEec-CC-----CeEEEEEcccccccc--ccccccccEEEEEECCCCCeEEEecCC-----CcEEEEEcCCCe-
Q psy7482 22 ATSKLAASSG-AD-----ETVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGSWQ- 87 (327)
Q Consensus 22 ~~~~~l~~~~-~d-----g~v~~w~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~- 87 (327)
+++.+++.|+ .+ ..+.+||+.+++... .+.........+.. ++..++.|+.+ ..+.+||..+.+
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE--CCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 4667777777 33 368899987765322 22211111122222 46677777755 468999987755
Q ss_pred --EEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE
Q psy7482 88 --LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY 160 (327)
Q Consensus 88 --~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 160 (327)
....- ...... -...+...+++.++.|+.+ ..+.+||+.+.+.......+.... ....+.+ +++++
T Consensus 91 ~~W~~~~-~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~~~~~--~~~iy 163 (301)
T 2vpj_A 91 GVWYSVA-PMNVRR-GLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTARE---GAGLVVA--SGVIY 163 (301)
T ss_dssp CCCEEEC-CCSSCC-BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCB---SCEEEEE--TTEEE
T ss_pred CeeEECC-CCCCCc-cceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcc---cceEEEE--CCEEE
Confidence 32221 111111 1111222256677777653 358899988877655443333211 1222222 66777
Q ss_pred Eeec-C-----CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCCceeEEeeeccc
Q psy7482 161 AIPI-Q-----NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDGSHLWQIKASAS 227 (327)
Q Consensus 161 ~~~~-~-----~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~ 227 (327)
+.|+ + ..+.+||..+.+-... +.....-.+++...+..++.|+.+ ..+.+||+.+.+-...-.....
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred EECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence 7664 2 4688999887654332 222222233444445667777653 5689999987643221111111
Q ss_pred -ceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCc
Q psy7482 228 -RIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGS 261 (327)
Q Consensus 228 -~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~ 261 (327)
.-.+++. .+++.++.|+.+ ..+.+||+.+.+
T Consensus 244 r~~~~~~~---~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 244 RCYVGATV---LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CBSCEEEE---ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred ccceeEEE---ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 1112222 467777777765 457888887654
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.43 E-value=2e-06 Score=76.84 Aligned_cols=212 Identities=10% Similarity=0.030 Sum_probs=123.7
Q ss_pred cEEEEEe--CCCEEE-EecCCCeEEEEEccc----cccccccccccccEEEEEECCCC-CeEEEecCCCcEEEEEcCCCe
Q psy7482 16 SVRSVAA--TSKLAA-SSGADETVVLYDMVK----RKQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGSWQ 87 (327)
Q Consensus 16 ~v~~~~~--~~~~l~-~~~~dg~v~~w~~~~----~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~ 87 (327)
.+..|+| .++.|+ +-...+.|+.+++.. ......+.........|++.+.+ +++++-...+.|.+.++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 3446666 344444 444567888888765 22222222122234567887544 444554567789999987544
Q ss_pred EEEeEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c
Q psy7482 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I 164 (327)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 164 (327)
....+ ...... ...+++.|.+..|+.+.. .+.|..+++..... ..+.... ......|+|+|++..|..+ .
T Consensus 487 ~~~l~-~~~~~~-P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~----l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 487 RKTLF-REQGSK-PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTEN----IQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp EEEEC-CCSSCC-CCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCSS----CSSCCCEEECTTTCCEEEEET
T ss_pred eEEEE-eCCCCC-cceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeCC----CCCccEEEEeccCCEEEEEec
Confidence 33333 222233 688899986655555442 26788887753322 2211111 1236789999976555544 3
Q ss_pred -CCeEEEEEecCCceeeEec---CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482 165 -QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF 234 (327)
Q Consensus 165 -~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 234 (327)
.+.|..+++........+. .......+++..+.++++....+.|..++..+++.+..+.........|++
T Consensus 560 ~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 560 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCB
T ss_pred CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEE
Confidence 6789999986543332222 123455677777777778888899999998888877766543333444544
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.39 E-value=0.00052 Score=55.98 Aligned_cols=215 Identities=14% Similarity=0.222 Sum_probs=114.4
Q ss_pred cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe--EE--ecccCCceeeEEEecC---CCEEEEEeC-C-----CCE
Q psy7482 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL--FK--KAHKGTAVNHISIHPS---GKLALSVGK-D-----KTL 122 (327)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~--~~--~~~~~~~v~~~~~~~~---~~~l~~~~~-d-----g~i 122 (327)
....++|.|+|+++++ ..+|.|.+++ .++.... +. ...... ...++++|+ +..|+.+.. . +.|
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~-p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESG-LLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCS-EEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCC-ceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 4678999999985554 5568999998 4442211 10 111234 889999998 555555443 2 578
Q ss_pred EEEEcCCCce---eeeee-cc--ccCccccceEEEEEccCCcEEEeecC--------------CeEEEEEecCC------
Q psy7482 123 RTWNLVKGRS---AYITN-LS--SYGVGFENLDSVVWSPEGLLYAIPIQ--------------NKAVVFSVEKA------ 176 (327)
Q Consensus 123 ~iwd~~~~~~---~~~~~-~~--~~~~~~~~v~~~~~~~~~~~l~~~~~--------------~~i~i~d~~~~------ 176 (327)
..++...+.. ...+. .+ ....| ....++|.|+|.++++..+ +.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h--~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLH--SGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCC--CCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCc--CCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 8888764321 11111 22 11112 2568999999987766432 45666665431
Q ss_pred ------ceeeEec-CCCceeEEEeec-CceEEEeCCC-CcE------EEEEcCCCc------------------eeEEee
Q psy7482 177 ------GVLQTLK-SESKVHSVCFLN-ETTVCTGNEE-SAI------TAYNLTDGS------------------HLWQIK 223 (327)
Q Consensus 177 ------~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~d-~~i------~i~d~~~~~------------------~~~~~~ 223 (327)
.....+. .......++|+| ++.|+++... ..+ .+.-+..+. ++..+.
T Consensus 186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 1111121 223467788999 4555554322 221 122222222 222222
Q ss_pred ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce------eEEeecccCceEEEeeeC
Q psy7482 224 ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH------LWHIKASASRIKGLASHR 280 (327)
Q Consensus 224 ~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~------~~~~~~~~~~v~~~~~~~ 280 (327)
+......++| .+|.++++.-..+.|...++..... ...+......+..+++.|
T Consensus 266 -~~~ap~G~~~---~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p 324 (352)
T 2ism_A 266 -QGFPPGNLAF---FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGP 324 (352)
T ss_dssp -TCCCEEEEEE---ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECT
T ss_pred -CCCCCcceEE---ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECC
Confidence 2224567777 4677777766777888877764321 112212224566677666
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.39 E-value=0.00071 Score=57.29 Aligned_cols=236 Identities=16% Similarity=0.169 Sum_probs=135.0
Q ss_pred EEEEEeC----CCEEEEecCCCeEEEEEcccccccccccc---ccccEEEEEE-------CCCCCeEEEecCCC------
Q psy7482 17 VRSVAAT----SKLAASSGADETVVLYDMVKRKQSGALMQ---HEGTITCLKF-------TPEGSHLISCSDDG------ 76 (327)
Q Consensus 17 v~~~~~~----~~~l~~~~~dg~v~~w~~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~l~~~~~d~------ 76 (327)
...|+++ ++++++-...+.|++.|++++.....+.. .......++| +++++.|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 4567774 33444444456788899887665543332 2235889999 99999666665543
Q ss_pred -cEEEEEcCC-CeEE-----EeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcC-------CCce---------
Q psy7482 77 -SIAIFRVGS-WQLE-----KLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLV-------KGRS--------- 132 (327)
Q Consensus 77 -~i~iw~~~~-~~~~-----~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~-------~~~~--------- 132 (327)
.|.+.+... +... ..+ .. ... ...++++|+ +.++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v-~~-~~~-p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLI-AA-YKQ-CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEE-EE-ESC-CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred ceEEEEecCCCCceeecccceee-cc-CCC-ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 255665433 2321 233 11 223 577899995 4545555567889999987 4543
Q ss_pred --e-eeeeccccCccccceEEEEEccCCcEEEee-c-CCeEEEEEecC--Cce--eeEec-C---C------------Cc
Q psy7482 133 --A-YITNLSSYGVGFENLDSVVWSPEGLLYAIP-I-QNKAVVFSVEK--AGV--LQTLK-S---E------------SK 187 (327)
Q Consensus 133 --~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~~i~i~d~~~--~~~--~~~~~-~---~------------~~ 187 (327)
. ....... ......++|+|+++.|..+ . .+.|+.++... +.. ...+. . . ..
T Consensus 298 g~~~~l~~~~~----~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~ 373 (496)
T 3kya_A 298 NTFKQLFTIAD----PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNN 373 (496)
T ss_dssp TTEEEEEECSS----SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSS
T ss_pred cccceeEecCC----CCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCC
Confidence 0 1111211 1236789999999955444 3 78898876543 221 01111 0 0 12
Q ss_pred ee-EEEee-------cC-ceEEEeCCCCcEEEEEcCCCceeEEeeecc------------------------cceEEEEE
Q psy7482 188 VH-SVCFL-------NE-TTVCTGNEESAITAYNLTDGSHLWQIKASA------------------------SRIKGLVF 234 (327)
Q Consensus 188 i~-~~~~~-------~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------------------------~~v~~~~~ 234 (327)
.. .++.. ++ .++++-.....|+.++ .++ .+.++.+.. .....|++
T Consensus 374 P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav 451 (496)
T 3kya_A 374 PCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY 451 (496)
T ss_dssp EEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred CeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence 34 44554 34 4555556778899988 455 344443320 12456777
Q ss_pred EecCC-CcEEEEecCCCeEEEEEcCCCcee
Q psy7482 235 FSIPQ-ETTVCTGNEESAITAYNLTDGSHL 263 (327)
Q Consensus 235 ~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~ 263 (327)
. ++ +.++++=.....|+.++++....+
T Consensus 452 d--~~~g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 452 D--DVKEMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp E--TTTTEEEEEETTTTEEEEEEECCCC--
T ss_pred E--CCCCEEEEEeCCCCEEEEEECCCCccc
Confidence 4 54 666666666777888887665444
No 301
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.39 E-value=0.00045 Score=54.87 Aligned_cols=199 Identities=10% Similarity=0.088 Sum_probs=122.1
Q ss_pred EEEEEECCCCCeEEEe-cCCCcEEEEEcCCCeEEEeEEecc------cCCceeeEEE---ecCCCEEEEEeC--------
Q psy7482 57 ITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQLEKLFKKAH------KGTAVNHISI---HPSGKLALSVGK-------- 118 (327)
Q Consensus 57 v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~------~~~~v~~~~~---~~~~~~l~~~~~-------- 118 (327)
-.+++|.+....|..+ -..++|..|+...+...... ... ....+..+.| .|+++++++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~-~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV-IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC-CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe-cCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 4567898755555544 47999999999765443332 222 1112678999 588777765432
Q ss_pred -----CCCEEEEEcC---CCceeeeeeccccCc--------cccceEEEEEccCCcEEEeec-C-CeEEEEEecCCceee
Q psy7482 119 -----DKTLRTWNLV---KGRSAYITNLSSYGV--------GFENLDSVVWSPEGLLYAIPI-Q-NKAVVFSVEKAGVLQ 180 (327)
Q Consensus 119 -----dg~i~iwd~~---~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~-~-~~i~i~d~~~~~~~~ 180 (327)
+..|..+|+. +++.+....+..... .......++..++|+..++++ . +.|..++.... ...
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~ 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence 5779999999 788777666543211 112388999999999988876 6 78777776543 222
Q ss_pred Eec-------CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCcee-EEee--ec---ccceEEE-EEEecCCCcE-EE
Q psy7482 181 TLK-------SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHL-WQIK--AS---ASRIKGL-VFFSIPQETT-VC 244 (327)
Q Consensus 181 ~~~-------~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~-~~~~--~~---~~~v~~~-~~~~s~~~~~-l~ 244 (327)
.+. .....+.|+++|+ ..|++....|.+..+|+...... .... +. -.....+ ... .+|+. ++
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~--~~G~vllV 250 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVP--VGNESVLV 250 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEE--ETTEEEEE
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccc--cCCEEEEE
Confidence 221 1223679999998 56666666999999998843220 1111 21 1122333 221 36776 45
Q ss_pred EecCCCeEEEEEcCC
Q psy7482 245 TGNEESAITAYNLTD 259 (327)
Q Consensus 245 ~~~~d~~i~i~d~~~ 259 (327)
+.+..+.+.+.+...
T Consensus 251 ~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 251 GARAPYAISFRSWDN 265 (334)
T ss_dssp EEETTEEEEEECSST
T ss_pred EcCCCCEEEEECCCC
Confidence 555566666665444
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=0.00074 Score=57.19 Aligned_cols=235 Identities=10% Similarity=0.112 Sum_probs=135.6
Q ss_pred EEEEEECC-CCCeEEEec-CCCcEEEEEcCCCeEEEeEEecc--cCCceeeEEE-------ecCCCEEEEEeCCC-C---
Q psy7482 57 ITCLKFTP-EGSHLISCS-DDGSIAIFRVGSWQLEKLFKKAH--KGTAVNHISI-------HPSGKLALSVGKDK-T--- 121 (327)
Q Consensus 57 v~~~~~~~-~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~--~~~~v~~~~~-------~~~~~~l~~~~~dg-~--- 121 (327)
...|+|.| ++..|+.+. ..+.|++.|.+++........+. ... ...++| +++++.|+++...+ .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~-p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNR-IRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSB-EEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCC-CcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 56899998 344454444 34678889988877665552211 123 789999 99998777776554 2
Q ss_pred ---EEEEEcCC-Ccee-----eeeeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEec-------CCce-----
Q psy7482 122 ---LRTWNLVK-GRSA-----YITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVE-------KAGV----- 178 (327)
Q Consensus 122 ---i~iwd~~~-~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~-------~~~~----- 178 (327)
+.+++... +... .... .. .....++.+|++ .++++.. ++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~--~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~ 293 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIA--AY----KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV 293 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEE--EE----SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred CceEEEEecCCCCceeecccceeec--cC----CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc
Confidence 66665333 2221 1111 11 126678899955 4444444 7889999987 4543
Q ss_pred ---------eeEecCCCceeEEEeecC-c-eEEEeCCCCcEEEEEcC--CCce--eEEeeec---c------------cc
Q psy7482 179 ---------LQTLKSESKVHSVCFLNE-T-TVCTGNEESAITAYNLT--DGSH--LWQIKAS---A------------SR 228 (327)
Q Consensus 179 ---------~~~~~~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~--~~~~--~~~~~~~---~------------~~ 228 (327)
+...........++|+|+ + ++++-.....|+.++.. .+.. ...+.+. . ..
T Consensus 294 ~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~ 373 (496)
T 3kya_A 294 KNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNN 373 (496)
T ss_dssp GGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSS
T ss_pred cccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCC
Confidence 112223455789999999 5 35555677889886653 2221 1222221 0 11
Q ss_pred eEEEEEEec------CCCcEEEEecCCCeEEEEEcCCCceeEEeecc------------------------cCceEEEee
Q psy7482 229 IKGLVFFSI------PQETTVCTGNEESAITAYNLTDGSHLWHIKAS------------------------ASRIKGLAS 278 (327)
Q Consensus 229 v~~~~~~~s------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------------------------~~~v~~~~~ 278 (327)
.....+... +++.++++-.....|+.++ .++. +.++.+. -.....|++
T Consensus 374 P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav 451 (496)
T 3kya_A 374 PCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY 451 (496)
T ss_dssp EEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred CeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence 231333211 3466666666778899998 4553 4444322 023567777
Q ss_pred eC--cEEEEEe-cCCcEEEEEccCc
Q psy7482 279 HR--NHLICIT-SAGDLVVWELNED 300 (327)
Q Consensus 279 ~~--~~l~~~~-~dg~v~iw~~~~~ 300 (327)
++ ..|+.+. ....||.++++..
T Consensus 452 d~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 452 DDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECCC
T ss_pred ECCCCEEEEEeCCCCEEEEEECCCC
Confidence 76 3444444 3456777777665
No 303
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.37 E-value=0.00033 Score=55.79 Aligned_cols=227 Identities=13% Similarity=0.146 Sum_probs=119.4
Q ss_pred eCCCEEEEecCC----CeEEEEEcccccccc--ccccccccEEEEEECCCCCeEEEecCC-----CcEEEEEcCCCeEEE
Q psy7482 22 ATSKLAASSGAD----ETVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGSWQLEK 90 (327)
Q Consensus 22 ~~~~~l~~~~~d----g~v~~w~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~ 90 (327)
+++.+++.|+.+ ..+..||+.+.+... .+......-..+.+ ++..++.|+.+ ..+.+||..+.+...
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceee
Confidence 356677777754 458889987764322 12111111112222 56677777754 358899988765443
Q ss_pred eEEecccCCceeeEEEecCCCEEEEEeCCC-----CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-
Q psy7482 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDK-----TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI- 164 (327)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 164 (327)
.- ...... ....+..-+++.++.|+.++ .+.+||+.+.+.......+... .....+. -++++++.|+
T Consensus 92 ~~-~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~--~~~~iyv~GG~ 164 (302)
T 2xn4_A 92 VA-NMRDRR-STLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR---SSVGVGV--VGGLLYAVGGY 164 (302)
T ss_dssp EC-CCSSCC-BSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC---BSCEEEE--ETTEEEEECCE
T ss_pred CC-CCCccc-cceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc---cCceEEE--ECCEEEEEeCC
Confidence 32 111111 11112223567777777653 4778898877665443333221 1122222 2566766664
Q ss_pred C-------CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCCceeEE--eeecccc
Q psy7482 165 Q-------NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDGSHLWQ--IKASASR 228 (327)
Q Consensus 165 ~-------~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~ 228 (327)
+ ..+.+||..+.+-... +.....-.+++...+.+++.|+.+ ..+.+||+.+.+-... +.....
T Consensus 165 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~- 243 (302)
T 2xn4_A 165 DVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR- 243 (302)
T ss_dssp ETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB-
T ss_pred CCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc-
Confidence 2 3588899887653332 222222234444445677777654 4688999877643221 111111
Q ss_pred eEEEEEEecCCCcEEEEecCCC-----eEEEEEcCCCc
Q psy7482 229 IKGLVFFSIPQETTVCTGNEES-----AITAYNLTDGS 261 (327)
Q Consensus 229 v~~~~~~~s~~~~~l~~~~~d~-----~i~i~d~~~~~ 261 (327)
-..++. .+++.++.|+.++ .+.+||+.+.+
T Consensus 244 ~~~~~~---~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 244 NAGVCA---VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp SCEEEE---ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred cCeEEE---ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 112232 4677777777653 47888887654
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.36 E-value=0.00039 Score=55.34 Aligned_cols=226 Identities=8% Similarity=0.096 Sum_probs=118.8
Q ss_pred CCCeEEEec-CC-----CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCCCc--
Q psy7482 65 EGSHLISCS-DD-----GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGR-- 131 (327)
Q Consensus 65 ~~~~l~~~~-~d-----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~-- 131 (327)
++..++.|+ .+ ..+.+||..+.+....- ...... ........++.+++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r-~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLP-SITRKR-RYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECC-CCSSCC-BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCC-CCChhh-ccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 455666666 33 36889998876543321 111111 1222223356677777754 468999998876
Q ss_pred -eeeeeeccccCccccceEEEEEccCCcEEEeec-C-----CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEe
Q psy7482 132 -SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-----NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTG 202 (327)
Q Consensus 132 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~ 202 (327)
.......+... .....+.. ++++++.|+ + ..+.+||..+.+-... +.....-.+++...+..++.|
T Consensus 92 ~W~~~~~~p~~r---~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 166 (301)
T 2vpj_A 92 VWYSVAPMNVRR---GLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLG 166 (301)
T ss_dssp CCEEECCCSSCC---BSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEEC
T ss_pred eeEECCCCCCCc---cceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEEC
Confidence 44433332221 11222222 567777664 2 4688999887653332 222222233333444666676
Q ss_pred CCC-----CcEEEEEcCCCceeEEeeeccc-ceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCceeE--Eeecc
Q psy7482 203 NEE-----SAITAYNLTDGSHLWQIKASAS-RIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGSHLW--HIKAS 269 (327)
Q Consensus 203 ~~d-----~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~~--~~~~~ 269 (327)
+.+ ..+.+||+.+.+-...-..... .-.+++. .+++.++.|+.+ ..+.+||+.+.+-.. .+...
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~---~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL---LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE---ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE---ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence 644 4688999877643221111111 1112232 367777887764 468999988765222 11111
Q ss_pred cCceEEEeeeCcEEEEEecCC-----cEEEEEccCc
Q psy7482 270 ASRIKGLASHRNHLICITSAG-----DLVVWELNED 300 (327)
Q Consensus 270 ~~~v~~~~~~~~~l~~~~~dg-----~v~iw~~~~~ 300 (327)
......+.+...+++.|+.++ .+.+||+.+.
T Consensus 244 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 244 RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 111122233337777777653 4778888776
No 305
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.35 E-value=0.0015 Score=59.29 Aligned_cols=271 Identities=8% Similarity=0.079 Sum_probs=150.4
Q ss_pred CccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482 14 TASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (327)
Q Consensus 14 ~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 92 (327)
...|.++.. ....|..|+.+| +..||..+.+...........|.++.. .++ .|..++.+ -+..+|..+++.....
T Consensus 62 ~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 62 NTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFD 137 (758)
T ss_dssp SSCEEEEEEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEEC
T ss_pred CceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEec
Confidence 356888877 555677777666 788998766433211112335777654 344 46666655 5888998766543221
Q ss_pred Ee--cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc-CccccceEEEEEccCCcEEEeecCCeEE
Q psy7482 93 KK--AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY-GVGFENLDSVVWSPEGLLYAIPIQNKAV 169 (327)
Q Consensus 93 ~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~i~ 169 (327)
.. ......|.++....++.+.+ ++.+ -|..++..+++... ...... ......|.++...+++..|.+|+++.+.
T Consensus 138 ~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~ 214 (758)
T 3ott_A 138 TRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLF 214 (758)
T ss_dssp HHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEE
T ss_pred cCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEECCCCe
Confidence 00 11122378887777776554 5554 48888877654322 111111 1112237888888777655555556788
Q ss_pred EEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee--------cccceEEEEEEecCCC
Q psy7482 170 VFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA--------SASRIKGLVFFSIPQE 240 (327)
Q Consensus 170 i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------~~~~v~~~~~~~s~~~ 240 (327)
.+|..+++...... ....|.++...+++.|..|+.+ -+.+++..+++.. .+.. ....|.++.. +.+|
T Consensus 215 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~--D~~g 290 (758)
T 3ott_A 215 QYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFA--DQEH 290 (758)
T ss_dssp EEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEE--CTTC
T ss_pred EEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEE--cCCC
Confidence 89987665332211 2345788887777888888754 5788887665432 2211 1234777765 3455
Q ss_pred cEEEEecCCCeEEEEEcCCCceeEEee-----cccCceEEEeeeC-cEEEEEecCCcEEEEEcc
Q psy7482 241 TTVCTGNEESAITAYNLTDGSHLWHIK-----ASASRIKGLASHR-NHLICITSAGDLVVWELN 298 (327)
Q Consensus 241 ~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~ 298 (327)
. |..|+..| +.++.....-...... .....|.++.-.. ..|..|+.+| +..++..
T Consensus 291 ~-lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~ 351 (758)
T 3ott_A 291 N-IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDP 351 (758)
T ss_dssp C-EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCT
T ss_pred C-EEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCc-ceeeccc
Confidence 4 44455556 5444322111111111 1123577777766 5666666554 5555544
No 306
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.30 E-value=0.00076 Score=53.68 Aligned_cols=224 Identities=13% Similarity=0.166 Sum_probs=116.8
Q ss_pred CCeEEEecCC----CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCCCceeeee
Q psy7482 66 GSHLISCSDD----GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAYIT 136 (327)
Q Consensus 66 ~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~ 136 (327)
+..++.|+.+ ..+..||+.+.+....- ...... .......-++.+++.|+.+ ..+.+||..+.+.....
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVA-ELPSRR-CRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEEC-CCSSCC-BSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcc-cCCccc-ccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 4455566643 45888998876543321 111111 1111222356677777754 35889999887665444
Q ss_pred eccccCccccceEEEEEccCCcEEEeec-C-----CeEEEEEecCCceeeEe--cCCCceeEEEeecCceEEEeCC----
Q psy7482 137 NLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-----NKAVVFSVEKAGVLQTL--KSESKVHSVCFLNETTVCTGNE---- 204 (327)
Q Consensus 137 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~~---- 204 (327)
..+.... ....+.+ ++++++.|+ + ..+.+||..+.+-...- .....-.+++...+..++.|+.
T Consensus 94 ~~p~~r~---~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 94 NMRDRRS---TLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVAS 168 (302)
T ss_dssp CCSSCCB---SCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTT
T ss_pred CCCcccc---ceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCC
Confidence 3332211 1222222 566666664 3 35778888776533322 2222223344444466666654
Q ss_pred ---CCcEEEEEcCCCceeE--EeeecccceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCcee--EEeecccCc
Q psy7482 205 ---ESAITAYNLTDGSHLW--QIKASASRIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGSHL--WHIKASASR 272 (327)
Q Consensus 205 ---d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~--~~~~~~~~~ 272 (327)
...+.+||+.+.+-.. .+..... -.+++. .++++++.|+.+ ..+.+||+.+.+-. ..+......
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~ 244 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRS-GAGVGV---LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN 244 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCB-SCEEEE---ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CccccEEEEEeCCCCcEEECCCCccccc-cccEEE---ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcccc
Confidence 2458899987764322 1111111 112333 467788887764 36889998876522 111111111
Q ss_pred eEEEeeeCcEEEEEecCC-----cEEEEEccCc
Q psy7482 273 IKGLASHRNHLICITSAG-----DLVVWELNED 300 (327)
Q Consensus 273 v~~~~~~~~~l~~~~~dg-----~v~iw~~~~~ 300 (327)
-..+.+...+++.|+.++ .+.+||+.+.
T Consensus 245 ~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 245 AGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CeEEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 122223337777777654 4889998877
No 307
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.29 E-value=0.00081 Score=53.64 Aligned_cols=225 Identities=10% Similarity=0.106 Sum_probs=120.2
Q ss_pred CCEEEEecC--CCeEEEEEcccccccc--ccccccccEEEEEECCCCCeEEEecCC----CcEEEEEcCCCeEEEeEEec
Q psy7482 24 SKLAASSGA--DETVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDD----GSIAIFRVGSWQLEKLFKKA 95 (327)
Q Consensus 24 ~~~l~~~~~--dg~v~~w~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~ 95 (327)
+.+++.|+. ...+.+||..+++... .+......-.++.+ ++..++.|+.+ ..+.+||..+.+....- ..
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~-~~ 88 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL-GP 88 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEE-CC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECC-CC
Confidence 345556654 3568899988765322 22211111222222 56677777754 67889999887654332 11
Q ss_pred ccCCceeeEEEecCCCEEEEEeCC------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-----
Q psy7482 96 HKGTAVNHISIHPSGKLALSVGKD------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----- 164 (327)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----- 164 (327)
.... .......-++++++.|+.+ ..+.+||+.+.+.......+.... ....+. -++++++.|+
T Consensus 89 p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~~~~--~~~~iyv~GG~~~~~ 162 (306)
T 3ii7_A 89 PTPR-DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC---SHGMVE--ANGLIYVCGGSLGNN 162 (306)
T ss_dssp SSCC-BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB---SCEEEE--ETTEEEEECCEESCT
T ss_pred Cccc-cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc---eeEEEE--ECCEEEEECCCCCCC
Confidence 1111 1122222367777777765 468899998876654433332211 122222 2567766664
Q ss_pred -----CCeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCCceeE--EeeecccceE
Q psy7482 165 -----QNKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDGSHLW--QIKASASRIK 230 (327)
Q Consensus 165 -----~~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~--~~~~~~~~v~ 230 (327)
-..+.+||..+.+-... +.....-.+++...+.+++.|+.+ ..+.+||+.+.+-.. .+...... .
T Consensus 163 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~ 241 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVT-V 241 (306)
T ss_dssp TTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSC-C
T ss_pred CcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccc-e
Confidence 23488899887653322 222222233444445667777643 468899987754221 11111111 1
Q ss_pred EEEEEecCCCcEEEEecCC-----CeEEEEEcCCCc
Q psy7482 231 GLVFFSIPQETTVCTGNEE-----SAITAYNLTDGS 261 (327)
Q Consensus 231 ~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~ 261 (327)
.++. -+++.++.|+.+ ..+.+||+.+.+
T Consensus 242 ~~~~---~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 242 KCAA---VGSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEEE---ETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred eEEE---ECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 2222 367777887754 468888887764
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.28 E-value=0.003 Score=59.66 Aligned_cols=277 Identities=11% Similarity=0.091 Sum_probs=155.2
Q ss_pred CccEEEEEeC--------CCEEEEecC-CCeEEEEEcccccccccccc-ccccEEEEEEC--CCCCeEEEecCCCcEEEE
Q psy7482 14 TASVRSVAAT--------SKLAASSGA-DETVVLYDMVKRKQSGALMQ-HEGTITCLKFT--PEGSHLISCSDDGSIAIF 81 (327)
Q Consensus 14 ~~~v~~~~~~--------~~~l~~~~~-dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~d~~i~iw 81 (327)
...|.|+++. ++++|.|.. |++|+|+++.+.+.+....- ......++.+. ....+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 4579999981 478999986 99999999987655432211 11223333332 234578899999998766
Q ss_pred EcC--CCeEEEe--EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccce-EEEEEccC
Q psy7482 82 RVG--SWQLEKL--FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENL-DSVVWSPE 156 (327)
Q Consensus 82 ~~~--~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~ 156 (327)
.++ +++.... ...+. .|+.-..+...+..-+.+..+....++.-+ ++. ...+.... .+ ....|+..
T Consensus 633 ~~d~~tg~l~d~r~~~LG~--~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l-~~s~l~~~-----~v~~~~~F~se 703 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLGT--QPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKL-VFSNVNLK-----EVNYMCPLNSD 703 (1158)
T ss_dssp EECTTTCCEEEEEEEECCS--SCCEEEEEESSSCEEEEEESSSCEEEEESS-SSE-EEEEBSSS-----CCCEEEEECCS
T ss_pred EEcCCCCccccceeEEcCC--CceEEEEEeeCCceeEEEECCCCEEEEEcC-Cce-EEeccChH-----HhceEeccCcc
Confidence 654 4544332 11222 225444444444433333445555555433 332 22222211 12 23345432
Q ss_pred C--cEEEeecCCeEEEEEecCCc--eeeEecCCCceeEEEeecC-ceEEEeCC---------------------------
Q psy7482 157 G--LLYAIPIQNKAVVFSVEKAG--VLQTLKSESKVHSVCFLNE-TTVCTGNE--------------------------- 204 (327)
Q Consensus 157 ~--~~l~~~~~~~i~i~d~~~~~--~~~~~~~~~~i~~~~~~~~-~~l~~~~~--------------------------- 204 (327)
. .-++..+++.++|..+...+ .++.+.....+..++++|+ +.++++..
T Consensus 704 ~~~~g~v~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1158)
T 3ei3_A 704 GYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSV 783 (1158)
T ss_dssp SSTTEEEEECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEE
T ss_pred cCCCcEEEEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcc
Confidence 2 34445556678888775433 3445556778889999887 54433221
Q ss_pred ----------------------CCcEEEEEcCCCceeEEeeec-ccceEEEEEEe--cCCCcEEEEec----------CC
Q psy7482 205 ----------------------ESAITAYNLTDGSHLWQIKAS-ASRIKGLVFFS--IPQETTVCTGN----------EE 249 (327)
Q Consensus 205 ----------------------d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~--s~~~~~l~~~~----------~d 249 (327)
-+.|++.|..+.+.+..++-. ...+.+++... +....++++|. ..
T Consensus 784 ~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~ 863 (1158)
T 3ei3_A 784 SSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQ 863 (1158)
T ss_dssp CCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCC
T ss_pred cccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCc
Confidence 123677777777766555322 23355555431 12246888775 34
Q ss_pred CeEEEEEcCCCceeEEe-ecccCceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482 250 SAITAYNLTDGSHLWHI-KASASRIKGLASHRNHLICITSAGDLVVWELNED 300 (327)
Q Consensus 250 ~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~ 300 (327)
|.|.+|++.+++..... ....+++++++--..+|++|- ..+|++|++...
T Consensus 864 Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~i-g~~l~vy~l~~~ 914 (1158)
T 3ei3_A 864 GRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASI-NSTVRLYEWTTE 914 (1158)
T ss_dssp EEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEE-TTEEEEEEECTT
T ss_pred eEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEc-CCEEEEEECCCC
Confidence 88999999755422211 123578888875554554443 578999999865
No 309
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.24 E-value=0.00062 Score=54.39 Aligned_cols=226 Identities=12% Similarity=0.137 Sum_probs=119.4
Q ss_pred CCCEEEEecCC----CeEEEEEcccccccc--ccccccccEEEEEECCCCCeEEEecC----C-----CcEEEEEcCCCe
Q psy7482 23 TSKLAASSGAD----ETVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSD----D-----GSIAIFRVGSWQ 87 (327)
Q Consensus 23 ~~~~l~~~~~d----g~v~~w~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----~~i~iw~~~~~~ 87 (327)
++.+++.|+.+ ..+.+||..+++... .+......-..+.+ ++..++.|+. + ..+.+||..+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 77788888742 368899987765322 12111111122222 5667777775 2 468899988765
Q ss_pred EEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI 162 (327)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 162 (327)
....- ...... .......-++++++.|+.+ ..+.+||+.+.+.......+.... ....+.+ ++++++.
T Consensus 102 W~~~~-~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~--~~~iyv~ 174 (308)
T 1zgk_A 102 WSPCA-PMSVPR-NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI---GVGVAVL--NRLLYAV 174 (308)
T ss_dssp EEECC-CCSSCC-BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB---SCEEEEE--TTEEEEE
T ss_pred EeECC-CCCcCc-cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc---ceEEEEE--CCEEEEE
Confidence 43322 111111 1111122256677776643 468899998876554433332211 1222222 5677776
Q ss_pred ec-C-----CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCCceeEE--eeeccc
Q psy7482 163 PI-Q-----NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDGSHLWQ--IKASAS 227 (327)
Q Consensus 163 ~~-~-----~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~ 227 (327)
|+ + ..+.+||..+.+-... +.....-.+++...+..++.|+.+ ..+.+||+.+.+-... +.....
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 254 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS 254 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc
Confidence 64 2 4688999877653322 222222233444445677777654 5689999887643221 111111
Q ss_pred ceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCc
Q psy7482 228 RIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGS 261 (327)
Q Consensus 228 ~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~ 261 (327)
-.+++. -++++++.|+.+ ..+.+||+.+.+
T Consensus 255 -~~~~~~---~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 255 -ALGITV---HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp -SCEEEE---ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred -ceEEEE---ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 112333 367777777754 357788877654
No 310
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.23 E-value=0.00073 Score=53.68 Aligned_cols=169 Identities=8% Similarity=0.010 Sum_probs=109.3
Q ss_pred eeeeccCCccEEEEEeC---CCEEEEecCCCeEEEEEcccccccc-cccc----c--cccEEEEEE---CCCCCeEEEec
Q psy7482 7 TFVTHSHTASVRSVAAT---SKLAASSGADETVVLYDMVKRKQSG-ALMQ----H--EGTITCLKF---TPEGSHLISCS 73 (327)
Q Consensus 7 ~~~~~~h~~~v~~~~~~---~~~l~~~~~dg~v~~w~~~~~~~~~-~~~~----~--~~~v~~~~~---~~~~~~l~~~~ 73 (327)
.+.+++...--.+.+|+ +.++++.-..++|..||...+.... .+.+ . ...+..+.| .|+++++++..
T Consensus 5 ~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~ 84 (334)
T 2p9w_A 5 QIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMK 84 (334)
T ss_dssp EEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEE
T ss_pred eEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEc
Confidence 34445555555677883 5555555589999999987553222 2322 1 124689999 58877777543
Q ss_pred -------------CCCcEEEEEcC---CCeEEEeEEec-c----------cCCceeeEEEecCCCEEEEEeCC-CCEEEE
Q psy7482 74 -------------DDGSIAIFRVG---SWQLEKLFKKA-H----------KGTAVNHISIHPSGKLALSVGKD-KTLRTW 125 (327)
Q Consensus 74 -------------~d~~i~iw~~~---~~~~~~~~~~~-~----------~~~~v~~~~~~~~~~~l~~~~~d-g~i~iw 125 (327)
.+..|..+|+. +++........ . .-.....++..++|+..++++.. +.|...
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV 164 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARV 164 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEE
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEE
Confidence 25779999998 77766555211 1 11127899999999999988887 887777
Q ss_pred EcCCCceeeeeeccc-cCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC
Q psy7482 126 NLVKGRSAYITNLSS-YGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA 176 (327)
Q Consensus 126 d~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~ 176 (327)
+.... ....+.... ........+.++++|++.+|++.. .+.+..+|+...
T Consensus 165 ~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 165 SADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 76533 322222111 111122367999999998887775 899999998843
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.18 E-value=0.0017 Score=52.94 Aligned_cols=218 Identities=11% Similarity=0.121 Sum_probs=116.5
Q ss_pred ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe-EEEeEE--ecccCCceeeEEEecC---CCEEEEEeC----C----C
Q psy7482 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ-LEKLFK--KAHKGTAVNHISIHPS---GKLALSVGK----D----K 120 (327)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~--~~~~~~~v~~~~~~~~---~~~l~~~~~----d----g 120 (327)
.....++|.|+|++++ +..+|.|.+++ .+++ .+..+. ...... ...++++|+ +..|+.+.. + +
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g-~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAG-LLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCS-EEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCc-eeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 3467899999998555 45568999887 3454 111110 111234 889999997 455555443 2 5
Q ss_pred CEEEEEcCCC--c---eeeeee-ccccCccccceEEEEEccCCcEEEeecC--------------CeEEEEEecCC----
Q psy7482 121 TLRTWNLVKG--R---SAYITN-LSSYGVGFENLDSVVWSPEGLLYAIPIQ--------------NKAVVFSVEKA---- 176 (327)
Q Consensus 121 ~i~iwd~~~~--~---~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------~~i~i~d~~~~---- 176 (327)
.|..|+.... . ....+. .+....| ....+.|.|+|.++++..+ |.|.-++....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h--~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIH--NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSC--CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCc--CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 6778877654 1 111111 2211122 2567999999987776432 45655554321
Q ss_pred -----ceeeEecCCCceeEEEeec-CceEEEeCCCC----cEEEEEcCCCc------------------eeEEeeecccc
Q psy7482 177 -----GVLQTLKSESKVHSVCFLN-ETTVCTGNEES----AITAYNLTDGS------------------HLWQIKASASR 228 (327)
Q Consensus 177 -----~~~~~~~~~~~i~~~~~~~-~~~l~~~~~d~----~i~i~d~~~~~------------------~~~~~~~~~~~ 228 (327)
..+... .......++|+| ++.|+++.... .|.+.. .+. ++..+......
T Consensus 184 npf~~~~i~a~-G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 184 NPFPNSPIWSY-GHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp SSSTTCCEEEE-CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCCCCCcEEEE-ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 011122 223456899999 46555543221 233322 211 22222111234
Q ss_pred eEEEEEEe-----cCCCcEEEEecCCCeEEEEEcCCC-cee--EEee-cccCceEEEeeeC
Q psy7482 229 IKGLVFFS-----IPQETTVCTGNEESAITAYNLTDG-SHL--WHIK-ASASRIKGLASHR 280 (327)
Q Consensus 229 v~~~~~~~-----s~~~~~l~~~~~d~~i~i~d~~~~-~~~--~~~~-~~~~~v~~~~~~~ 280 (327)
...++|.. ..+|.++++.-..+.|...++... +.. ..+. +....+..+++.|
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~p 321 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDD 321 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECT
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECC
Confidence 66777731 135677777777788888888753 221 2222 2234567777766
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.15 E-value=0.0017 Score=51.70 Aligned_cols=224 Identities=11% Similarity=0.111 Sum_probs=118.5
Q ss_pred CeEEEecC--CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC----CCEEEEEcCCCceeeeeeccc
Q psy7482 67 SHLISCSD--DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVKGRSAYITNLSS 140 (327)
Q Consensus 67 ~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~ 140 (327)
.+++.|+. ...+.+||..+.+-...- ...... .......-++.+++.|+.+ ..+.+||+.+.+.......+.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~-~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIR-CPFEKR-RDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECC-CCSCCC-BSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCC-CCCccc-ceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34555654 357899999886644321 111111 1112222356677777754 568899998877655443333
Q ss_pred cCccccceEEEEEccCCcEEEeec-C------CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCC-------
Q psy7482 141 YGVGFENLDSVVWSPEGLLYAIPI-Q------NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNE------- 204 (327)
Q Consensus 141 ~~~~~~~v~~~~~~~~~~~l~~~~-~------~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~------- 204 (327)
... ....+.+ ++++++.|+ + ..+.+||..+.+-... +.....-.+++...+..++.|+.
T Consensus 91 ~r~---~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 91 PRD---SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp CCB---SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTC
T ss_pred ccc---ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcc
Confidence 211 1222222 566766664 3 4688999887653332 22222222333444456666653
Q ss_pred --CCcEEEEEcCCCceeEEeeeccc-ceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCc--eeEEeecccCceE
Q psy7482 205 --ESAITAYNLTDGSHLWQIKASAS-RIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGS--HLWHIKASASRIK 274 (327)
Q Consensus 205 --d~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~--~~~~~~~~~~~v~ 274 (327)
-..+.+||+.+.+-...-..... .-.+++. -+++.++.|+.+ ..+.+||+.+.+ .+..+........
T Consensus 166 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~---~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 242 (306)
T 3ii7_A 166 RVLNSCEVYDPATETWTELCPMIEARKNHGLVF---VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVK 242 (306)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEE---ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCE
T ss_pred cccceEEEeCCCCCeEEECCCccchhhcceEEE---ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCcccee
Confidence 35588999887643221111111 1112232 367777777654 358899988765 2211211111222
Q ss_pred EEeeeCcEEEEEecC-----CcEEEEEccCc
Q psy7482 275 GLASHRNHLICITSA-----GDLVVWELNED 300 (327)
Q Consensus 275 ~~~~~~~~l~~~~~d-----g~v~iw~~~~~ 300 (327)
.+.+...+++.|+.+ ..+.+||+...
T Consensus 243 ~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 243 CAAVGSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEEETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred EEEECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 333334777778754 45888888887
No 313
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=98.09 E-value=0.00019 Score=57.68 Aligned_cols=194 Identities=10% Similarity=0.026 Sum_probs=107.4
Q ss_pred CCEEEEecCCCeEEEEEccccccccccccc-cccEEEEEEC--C-CCCeEEEe-cCCCcEEEEEcCCCeEEEeEEecccC
Q psy7482 24 SKLAASSGADETVVLYDMVKRKQSGALMQH-EGTITCLKFT--P-EGSHLISC-SDDGSIAIFRVGSWQLEKLFKKAHKG 98 (327)
Q Consensus 24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~ 98 (327)
+.+++.++.||.|.-.|..+|+....+... ..++....-. + ++..++.. ..||.|..++..+|.....+.....-
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 457888899999999999999888777643 1222221100 1 23334443 68999999999888655544221110
Q ss_pred CceeeEEEe-----------cCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcccc--ceEEEE---Ec--cCCcEE
Q psy7482 99 TAVNHISIH-----------PSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFE--NLDSVV---WS--PEGLLY 160 (327)
Q Consensus 99 ~~v~~~~~~-----------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~v~~~~---~~--~~~~~l 160 (327)
. ..-+... ..+..+++++.+|.+...|+++|+.+..+.......... ...|.. +. ..+..+
T Consensus 90 ~-~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 90 S-TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp T-TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred e-ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 0 1111111 135578899999999999999999988876553311000 000111 10 112334
Q ss_pred Eee-cCCeEEEEEecCCceeeEecC----CCcee-----EEEeecCceEEEeCCCCcEEEEEcCCCceeE
Q psy7482 161 AIP-IQNKAVVFSVEKAGVLQTLKS----ESKVH-----SVCFLNETTVCTGNEESAITAYNLTDGSHLW 220 (327)
Q Consensus 161 ~~~-~~~~i~i~d~~~~~~~~~~~~----~~~i~-----~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 220 (327)
..+ .+..+.+.+ ++++ +..+.. ...+. .-..+.|+.++.++.||.|..+|..+++.+.
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 444 366666666 4443 222210 00000 0001123445668889999999998888776
No 314
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.09 E-value=0.0056 Score=55.55 Aligned_cols=265 Identities=14% Similarity=0.120 Sum_probs=151.9
Q ss_pred CccEEEEEe-CCCEEEEecCCCeEEEEEcccccccccc-ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482 14 TASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (327)
Q Consensus 14 ~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 91 (327)
...|.+|.- ...++..|..+| +..||-.+.+..... ......|.++....++ .|..|+.+| +..||..+.+....
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~ 97 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQP 97 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCC
T ss_pred cceEEEEEECCCCCEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECc
Confidence 467999988 455677777777 566774322211111 1123568888777665 566666665 78999887654321
Q ss_pred EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEE
Q psy7482 92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVF 171 (327)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~ 171 (327)
. ...... |.++.. .++ .|..++.+ .|..+|..+++....... ........|.++...+++.+.+.. .+.+..+
T Consensus 98 ~-~~~~~~-i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lWigt-~~Gl~~~ 170 (758)
T 3ott_A 98 E-TDFPTD-VRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTR-RNGLPNNTIYSIIRTKDNQIYVGT-YNGLCRY 170 (758)
T ss_dssp S-CCCCSC-EEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHH-HHCCSCSCEEEEEECTTCCEEEEE-TTEEEEE
T ss_pred c-cCCCce-EEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccC-CCCcCCCeEEEEEEcCCCCEEEEe-CCCHhhC
Confidence 1 111223 776654 344 56666665 588899876554322111 111112348888888888877654 4568888
Q ss_pred EecCCceeeEecC-------CCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE
Q psy7482 172 SVEKAGVLQTLKS-------ESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV 243 (327)
Q Consensus 172 d~~~~~~~~~~~~-------~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l 243 (327)
+..+++.. .+.. ...|.++...++ +.|..|+. +-+..+|..+++...........|.++.. ..+|.+.
T Consensus 171 ~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~--d~~g~lW 246 (758)
T 3ott_A 171 IPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLAL--DGNGDLL 246 (758)
T ss_dssp ETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEE--CTTCCEE
T ss_pred ccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEE--cCCCCEE
Confidence 87765532 2221 224788887775 56677764 46888898766432221122345777766 3555554
Q ss_pred EEecCCCeEEEEEcCCCceeEEee-------cccCceEEEeeeC-cEEEEEecCCcEEEE
Q psy7482 244 CTGNEESAITAYNLTDGSHLWHIK-------ASASRIKGLASHR-NHLICITSAGDLVVW 295 (327)
Q Consensus 244 ~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~-~~l~~~~~dg~v~iw 295 (327)
+ |+. +-+.+++..+++...... -....|.++.... ..|..|+..| +.+.
T Consensus 247 i-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~ 303 (758)
T 3ott_A 247 A-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLS 303 (758)
T ss_dssp E-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEE
T ss_pred E-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-cccc
Confidence 4 444 457888876654322111 1124588887776 5666677666 4443
No 315
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.04 E-value=0.0033 Score=51.23 Aligned_cols=225 Identities=13% Similarity=0.150 Sum_probs=115.5
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEcccccc--cccc---ccccccEEEEEECCC---CCeEEEecC-C-----CcE
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ--SGAL---MQHEGTITCLKFTPE---GSHLISCSD-D-----GSI 78 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~--~~~~---~~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~i 78 (327)
..-..|+| +|+++++ ..+|.|++++ +++. +..+ .........++|+|+ +..|+.+.. . ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34568888 7775554 5569999998 3331 1111 122456889999998 555554433 2 568
Q ss_pred EEEEcCCCeE---EEe---EEe--cccCCceeeEEEecCCCEEEEEeCC-------------CCEEEEEcCCCceeeeee
Q psy7482 79 AIFRVGSWQL---EKL---FKK--AHKGTAVNHISIHPSGKLALSVGKD-------------KTLRTWNLVKGRSAYITN 137 (327)
Q Consensus 79 ~iw~~~~~~~---~~~---~~~--~~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~~~~~~ 137 (327)
..++...+.. ... +.. ..... ...++|.|+|.+.++.+.. |.|.-++... +....-+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~-~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~~p~~np 185 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHS-GGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-EPAPGNP 185 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCC-CCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-SBCTTCT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcC-CceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-CCCCCCc
Confidence 8888764321 111 210 11112 5689999999766654321 4455555432 1100000
Q ss_pred c--------cccCccccceEEEEEcc-CCcEEEeec-CCeE------EEEEecCCc------------------eeeEec
Q psy7482 138 L--------SSYGVGFENLDSVVWSP-EGLLYAIPI-QNKA------VVFSVEKAG------------------VLQTLK 183 (327)
Q Consensus 138 ~--------~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i------~i~d~~~~~------------------~~~~~~ 183 (327)
+ ............++|+| ++.++++-. .+.+ .+.-+..+. +...+.
T Consensus 186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 0 00000012267889999 666666543 2221 122222222 222233
Q ss_pred CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCce------eEEeeecccceEEEEEEecCCCcEEEEe
Q psy7482 184 SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSH------LWQIKASASRIKGLVFFSIPQETTVCTG 246 (327)
Q Consensus 184 ~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------~~~~~~~~~~v~~~~~~~s~~~~~l~~~ 246 (327)
.......++|.....+++....+.|...++..... ...+-.....+..+++ .|+|.++++.
T Consensus 266 ~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~--~pdG~lyv~~ 332 (352)
T 2ism_A 266 QGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQV--GPDGALYVTT 332 (352)
T ss_dssp TCCCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEE--CTTSCEEEEE
T ss_pred CCCCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEE--CCCCcEEEEE
Confidence 33456677774445555556667787777654321 1222122346778887 4788666554
No 316
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.03 E-value=0.0023 Score=51.28 Aligned_cols=224 Identities=13% Similarity=0.049 Sum_probs=113.8
Q ss_pred EEEEecCCCeEEEEEcccccccc-ccccccccEEEEEECCCCCeEEEecC-----C------CcEEEEEcCCCeEEEeEE
Q psy7482 26 LAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHLISCSD-----D------GSIAIFRVGSWQLEKLFK 93 (327)
Q Consensus 26 ~l~~~~~dg~v~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------~~i~iw~~~~~~~~~~~~ 93 (327)
+++.|+ ..+..||..+++-.. .+..............++..++.|+. . ..+..||..+.+-...-
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~- 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP- 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC-
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC-
Confidence 455566 579999998876432 11111112222233346777777773 1 12778888876643321
Q ss_pred ecccCCceeeEEEecCCCEEEEEeCC--------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC
Q psy7482 94 KAHKGTAVNHISIHPSGKLALSVGKD--------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ 165 (327)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 165 (327)
...... .......-+++.++.|+.+ ..+.+||+.+.+.......+.... .. +++. .++++++.|+.
T Consensus 84 ~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~-~~~~-~~~~iyv~GG~ 157 (315)
T 4asc_A 84 PLPSPR-CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVY---GH-TVLS-HMDLVYVIGGK 157 (315)
T ss_dssp CBSSCE-ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCB---SC-EEEE-ETTEEEEECCB
T ss_pred CCCcch-hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccc---ce-eEEE-ECCEEEEEeCC
Confidence 111111 1111112256666777632 458999998876544433332211 11 2222 35666666642
Q ss_pred -------CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCCC-----cEEEEEcCCCceeEEeeecc-cceE
Q psy7482 166 -------NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEES-----AITAYNLTDGSHLWQIKASA-SRIK 230 (327)
Q Consensus 166 -------~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~-~~v~ 230 (327)
..+.+||..+.+-... +.....-.+++...+..++.|+.++ .+.+||+.+.+-...-.... ..-.
T Consensus 158 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 237 (315)
T 4asc_A 158 GSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSL 237 (315)
T ss_dssp CTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccce
Confidence 4688999887643222 2222222334444456677776544 47889987764322111111 1111
Q ss_pred EEEEEecCCCcEEEEecCC--------------CeEEEEEcCCCc
Q psy7482 231 GLVFFSIPQETTVCTGNEE--------------SAITAYNLTDGS 261 (327)
Q Consensus 231 ~~~~~~s~~~~~l~~~~~d--------------~~i~i~d~~~~~ 261 (327)
+++. -+++.++.|+.+ ..+.+||+.+.+
T Consensus 238 ~~~~---~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 238 SLVS---LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEE---ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred eEEE---ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 2232 366777777653 236777876654
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.92 E-value=0.0047 Score=48.83 Aligned_cols=213 Identities=11% Similarity=0.102 Sum_probs=138.5
Q ss_pred CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEE
Q psy7482 74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW 153 (327)
Q Consensus 74 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 153 (327)
.+.+|.|.|+.+++..... .-. .-+.-.+|..+.++.-. ...+.++|+++.+.+....+... |.-=.|
T Consensus 47 ~~~~VvIiDl~n~~~~~Rr--pi~---AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~------VvfWkW 114 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRR--PIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD------VTFWKW 114 (365)
T ss_dssp TEEEEEEEETTSTTSCEEE--ECC---CSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSC------EEEEEE
T ss_pred CCCEEEEEECCCCCCcccc--ccc---cceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCc------cEEEEe
Confidence 3447899999876654332 111 23445789888777765 67899999999988888777665 776677
Q ss_pred ccCCcEEEeecCCeEEEEEecC-CceeeEec-----CCCceeEEEeecC-ceEEEeC-------CCCcEEEEEcCCCcee
Q psy7482 154 SPEGLLYAIPIQNKAVVFSVEK-AGVLQTLK-----SESKVHSVCFLNE-TTVCTGN-------EESAITAYNLTDGSHL 219 (327)
Q Consensus 154 ~~~~~~l~~~~~~~i~i~d~~~-~~~~~~~~-----~~~~i~~~~~~~~-~~l~~~~-------~d~~i~i~d~~~~~~~ 219 (327)
-. .+.|+..++..|+-|++.. ..+.+.+. ....|.....+++ +.++..+ -.|.+.+|..+.+ .-
T Consensus 115 is-~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~s 192 (365)
T 2xzh_A 115 IS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VS 192 (365)
T ss_dssp CS-SSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EE
T ss_pred cC-CCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-cc
Confidence 64 4567777789999999975 35555555 2456777777777 5444322 3467889998654 55
Q ss_pred EEeeecccceEEEEEEecCC-CcEEEEecC---CCeEEEEEcCCC---cee-----EE-ee---cccCceEEEeeeC--c
Q psy7482 220 WQIKASASRIKGLVFFSIPQ-ETTVCTGNE---ESAITAYNLTDG---SHL-----WH-IK---ASASRIKGLASHR--N 281 (327)
Q Consensus 220 ~~~~~~~~~v~~~~~~~s~~-~~~l~~~~~---d~~i~i~d~~~~---~~~-----~~-~~---~~~~~v~~~~~~~--~ 281 (327)
+.+++|......+.....+. ..+++.+.. .+.++|.++... .+. .. +- ...+-.-++..++ .
T Consensus 193 Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg 272 (365)
T 2xzh_A 193 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 272 (365)
T ss_dssp EEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT
T ss_pred ceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC
Confidence 66788876554444310111 123333222 368999998543 111 11 11 1234456777787 8
Q ss_pred EEEEEecCCcEEEEEccCc
Q psy7482 282 HLICITSAGDLVVWELNED 300 (327)
Q Consensus 282 ~l~~~~~dg~v~iw~~~~~ 300 (327)
.+...+.-|.|.+||++++
T Consensus 273 viyviTK~G~ihlyDleTg 291 (365)
T 2xzh_A 273 VVFLITKYGYIHLYDLETG 291 (365)
T ss_dssp EEEEEETTSEEEEEETTTC
T ss_pred EEEEEeCCcEEEEEEcccC
Confidence 8999999999999999998
No 318
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.89 E-value=0.0057 Score=48.73 Aligned_cols=233 Identities=12% Similarity=0.087 Sum_probs=121.2
Q ss_pred CCCeEEEecCC----CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC----C-----CCEEEEEcCCCc
Q psy7482 65 EGSHLISCSDD----GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK----D-----KTLRTWNLVKGR 131 (327)
Q Consensus 65 ~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----g~i~iwd~~~~~ 131 (327)
++..++.|+.+ ..+.+||..+.+....- .......-.+++ ..++.+++.|+. + ..+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLA-DLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECC-CCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECC-CCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 45666667632 46889998876644321 111111011222 235666777665 2 468899998876
Q ss_pred eeeeeeccccCccccceEEEEEccCCcEEEeec-C-----CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeC
Q psy7482 132 SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-----NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGN 203 (327)
Q Consensus 132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~ 203 (327)
.......+... .....+.+ ++++++.|+ + ..+.+||..+.+-... +.....-.+++...+..++.|+
T Consensus 102 W~~~~~~p~~r---~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 176 (308)
T 1zgk_A 102 WSPCAPMSVPR---NRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGG 176 (308)
T ss_dssp EEECCCCSSCC---BTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred EeECCCCCcCc---cccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeC
Confidence 54443333221 11222222 567777664 2 4688899877653322 2222222233344446666766
Q ss_pred CC-----CcEEEEEcCCCceeEE--eeecccceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCcee--EEeecc
Q psy7482 204 EE-----SAITAYNLTDGSHLWQ--IKASASRIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGSHL--WHIKAS 269 (327)
Q Consensus 204 ~d-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~--~~~~~~ 269 (327)
.+ ..+.+||+.+.+-... +..... -.+++. -+++.++.|+.+ ..+.+||+.+.+-. ..+...
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 252 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMITAMNTIRS-GAGVCV---LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR 252 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEECCCCSSCCB-SCEEEE---ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC
T ss_pred CCCCCcCceEEEEeCCCCeEeeCCCCCCccc-cceEEE---ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC
Confidence 44 4588999876543211 111111 112233 367777777764 46899998876522 111111
Q ss_pred cCceEEEeeeCcEEEEEecCC-----cEEEEEccCccCCCceeeeec
Q psy7482 270 ASRIKGLASHRNHLICITSAG-----DLVVWELNEDVTREPQRVSAT 311 (327)
Q Consensus 270 ~~~v~~~~~~~~~l~~~~~dg-----~v~iw~~~~~~~~~~~~~~~~ 311 (327)
......+.....+++.|+.++ .+.+||+.+. .+..+...
T Consensus 253 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~ 296 (308)
T 1zgk_A 253 RSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD---TWSEVTRM 296 (308)
T ss_dssp CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT---EEEEEEEC
T ss_pred ccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCC---EEeecCCC
Confidence 111122223337777777543 4778888877 45555433
No 319
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.78 E-value=0.011 Score=48.69 Aligned_cols=213 Identities=11% Similarity=0.107 Sum_probs=139.8
Q ss_pred CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEE
Q psy7482 74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW 153 (327)
Q Consensus 74 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 153 (327)
.+..|.|-|+.+++..... .-. .-+.-.+|..+.++.-. ...+.++|+++.+.+....+... |.-=.|
T Consensus 46 ~~~~vvIiDl~~~~~~~rr--pi~---AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~------VvfWkW 113 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRR--PIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD------VTFWKW 113 (494)
T ss_dssp TCCEEEEEETTSTTSCEEE--ECC---CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC------CCEEEE
T ss_pred CCCeEEEEECCCCCcceec--ccc---cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC------ceEEEe
Confidence 3458999999886654332 111 23456788888777665 68999999999988887777665 666666
Q ss_pred ccCCcEEEeecCCeEEEEEecC-CceeeEec-----CCCceeEEEeecC-ceEEEeC-------CCCcEEEEEcCCCcee
Q psy7482 154 SPEGLLYAIPIQNKAVVFSVEK-AGVLQTLK-----SESKVHSVCFLNE-TTVCTGN-------EESAITAYNLTDGSHL 219 (327)
Q Consensus 154 ~~~~~~l~~~~~~~i~i~d~~~-~~~~~~~~-----~~~~i~~~~~~~~-~~l~~~~-------~d~~i~i~d~~~~~~~ 219 (327)
-. .+.|+..++..|+-|++.. ..+.+.+. ....|.....+++ +.++..+ ..|.+.+|..+.+ .-
T Consensus 114 is-~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~s 191 (494)
T 1bpo_A 114 IS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VS 191 (494)
T ss_dssp EE-TTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CE
T ss_pred cC-CCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-cc
Confidence 54 3467777789999999974 34555555 2456777777777 5544322 3477889998654 45
Q ss_pred EEeeecccceEEEEEEecCC-CcEEEEecC---CCeEEEEEcCCC---ce-----eEEee----cccCceEEEeeeC--c
Q psy7482 220 WQIKASASRIKGLVFFSIPQ-ETTVCTGNE---ESAITAYNLTDG---SH-----LWHIK----ASASRIKGLASHR--N 281 (327)
Q Consensus 220 ~~~~~~~~~v~~~~~~~s~~-~~~l~~~~~---d~~i~i~d~~~~---~~-----~~~~~----~~~~~v~~~~~~~--~ 281 (327)
+.+++|......+.....+. ...++.+.. .+.++|.++... .+ ...+. ...+-..++..++ .
T Consensus 192 Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg 271 (494)
T 1bpo_A 192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 271 (494)
T ss_dssp EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT
T ss_pred chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC
Confidence 66788877665555410011 123333333 378999998543 11 11111 1234456777888 8
Q ss_pred EEEEEecCCcEEEEEccCc
Q psy7482 282 HLICITSAGDLVVWELNED 300 (327)
Q Consensus 282 ~l~~~~~dg~v~iw~~~~~ 300 (327)
.+...+.-|.|.+||+.++
T Consensus 272 viyviTK~G~i~lyDleTg 290 (494)
T 1bpo_A 272 VVFLITKYGYIHLYDLETG 290 (494)
T ss_dssp EEEEEETTSEEEEEETTTC
T ss_pred EEEEEecCceEEEEecccc
Confidence 8999999999999999998
No 320
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.77 E-value=7.6e-05 Score=59.93 Aligned_cols=193 Identities=11% Similarity=0.074 Sum_probs=105.8
Q ss_pred CeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEe--cCCCEEEEE--eCCCCEEEEEcCCCceeeeeeccccC
Q psy7482 67 SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIH--PSGKLALSV--GKDKTLRTWNLVKGRSAYITNLSSYG 142 (327)
Q Consensus 67 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~ 142 (327)
..++.++.||.|.-.|.++|+....+....... +....-. +.+..++.+ ..||.|..++..+|........+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p-~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQP-LIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCC-SEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCC-cEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 468889999999999999999999883331122 2221100 112234444 57999999999888665554443321
Q ss_pred ccccceEE---EEE------ccCCcEEEeecCCeEEEEEecCCceeeEecCCCce--------eEEEe------ecCceE
Q psy7482 143 VGFENLDS---VVW------SPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKV--------HSVCF------LNETTV 199 (327)
Q Consensus 143 ~~~~~v~~---~~~------~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i--------~~~~~------~~~~~l 199 (327)
...++.. ... +.++..++.+.++.+...|+++|+.+..+....+. .|... ..++.+
T Consensus 90 -~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 90 -STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp -TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred -eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 0111111 000 13344444445999999999999999999843221 11111 112466
Q ss_pred EEeCCCCcEEEEEcCCCceeEEeeecc--cceEE--E--EEEecCCCcEEEEecCCCeEEEEEcCCCceeE
Q psy7482 200 CTGNEESAITAYNLTDGSHLWQIKASA--SRIKG--L--VFFSIPQETTVCTGNEESAITAYNLTDGSHLW 264 (327)
Q Consensus 200 ~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~v~~--~--~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~ 264 (327)
+.+..+..+.+.+ ++++ +..++... ..... + .+..+.++.+ +.++.||.|..+|..+|+.++
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 6776666666666 4453 33221100 00000 0 0000123555 446778888888888888776
No 321
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.76 E-value=0.0099 Score=47.59 Aligned_cols=224 Identities=14% Similarity=0.139 Sum_probs=113.3
Q ss_pred CEEEEecCCCeEEEEEccccccccc-cccccccEEEEEECCCCCeEEEecC----CC-------cEEEEEcCCCeEEEeE
Q psy7482 25 KLAASSGADETVVLYDMVKRKQSGA-LMQHEGTITCLKFTPEGSHLISCSD----DG-------SIAIFRVGSWQLEKLF 92 (327)
Q Consensus 25 ~~l~~~~~dg~v~~w~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~----d~-------~i~iw~~~~~~~~~~~ 92 (327)
.+++.|+. .+..||..+++.... +..............++..++.|+. ++ .+..||..+.+....-
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 44555553 488999887764331 1111111122223446777777773 11 1778888776544321
Q ss_pred EecccCCceeeEEEecCCCEEEEEeCC-------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-
Q psy7482 93 KKAHKGTAVNHISIHPSGKLALSVGKD-------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI- 164 (327)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 164 (327)
.......-.+++. -+++.++.|+.+ ..+.+||+.+.+.......+.... .- +++. .++++++.|+
T Consensus 95 -~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~-~~~~-~~~~iyv~GG~ 167 (318)
T 2woz_A 95 -PLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY---GH-NVIS-HNGMIYCLGGK 167 (318)
T ss_dssp -CBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE---SC-EEEE-ETTEEEEECCE
T ss_pred -CCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc---cc-EEEE-ECCEEEEEcCC
Confidence 1111110112222 256777777754 247888988776654433332211 11 2222 4667766664
Q ss_pred -C-----CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCCceeE--Eeeecccce
Q psy7482 165 -Q-----NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDGSHLW--QIKASASRI 229 (327)
Q Consensus 165 -~-----~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~--~~~~~~~~v 229 (327)
+ ..+.+||..+.+-... +.....-.+++...+..++.|+.+ ..+.+||+.+.+-.. .+..... -
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~ 246 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS-S 246 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB-S
T ss_pred CCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc-c
Confidence 1 3588999887653322 222222233444445666666543 346788887654221 1111111 1
Q ss_pred EEEEEEecCCCcEEEEecCC--------------CeEEEEEcCCCc
Q psy7482 230 KGLVFFSIPQETTVCTGNEE--------------SAITAYNLTDGS 261 (327)
Q Consensus 230 ~~~~~~~s~~~~~l~~~~~d--------------~~i~i~d~~~~~ 261 (327)
.+++. .+++.++.|+.+ ..+.+||+.+.+
T Consensus 247 ~~~~~---~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 247 ISLVS---LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp CEEEE---ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred eEEEE---ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 12232 466777777653 347777877654
No 322
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.76 E-value=0.011 Score=48.14 Aligned_cols=239 Identities=11% Similarity=0.139 Sum_probs=125.0
Q ss_pred cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE------ecccCCceeeEEEecC---CCEEEEEeC--------
Q psy7482 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK------KAHKGTAVNHISIHPS---GKLALSVGK-------- 118 (327)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~------~~~~~~~v~~~~~~~~---~~~l~~~~~-------- 118 (327)
....|+|.|+|+.|+++...|.|++++.. +.....+. ...... ...++++|+ +..|+.+..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g-~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGG-LLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCS-EEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCC-ceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 46789999999834455567899999853 33221110 111233 789999996 445554432
Q ss_pred CCCEEEEEcCCC--ce--ee-ee-eccccCccccceEEEEEccCCcEEEeecC--------------CeEEEEEecCCc-
Q psy7482 119 DKTLRTWNLVKG--RS--AY-IT-NLSSYGVGFENLDSVVWSPEGLLYAIPIQ--------------NKAVVFSVEKAG- 177 (327)
Q Consensus 119 dg~i~iwd~~~~--~~--~~-~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------~~i~i~d~~~~~- 177 (327)
...|..+++... +. .. .+ ..+...........+.|.|+|.++++..+ |.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 235666666433 11 11 11 11110011112467999999977666432 467666654320
Q ss_pred -----------eeeEec-CCCceeEEEeec-CceEEEeCCCC--cEEEEEcCCCc-------------------------
Q psy7482 178 -----------VLQTLK-SESKVHSVCFLN-ETTVCTGNEES--AITAYNLTDGS------------------------- 217 (327)
Q Consensus 178 -----------~~~~~~-~~~~i~~~~~~~-~~~l~~~~~d~--~i~i~d~~~~~------------------------- 217 (327)
....+. .......++|+| ++.|.++.... .=.|.-+..+.
T Consensus 177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 112222 234577899999 57666654321 11222111111
Q ss_pred ------eeEEeeecccceEEEEEEec-----CCCcEEEEecCCCeEEEEEcCCCceeEE--e-ecccCceEEEeeeC-cE
Q psy7482 218 ------HLWQIKASASRIKGLVFFSI-----PQETTVCTGNEESAITAYNLTDGSHLWH--I-KASASRIKGLASHR-NH 282 (327)
Q Consensus 218 ------~~~~~~~~~~~v~~~~~~~s-----~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~-~~~~~~v~~~~~~~-~~ 282 (327)
++..+..| .....+.|... .++.++++.-..+.|...++..++.... + ......+..+++.| ..
T Consensus 257 ~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 257 VAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp CTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 11222222 34667777521 1477777777788888888876643322 2 12234678888888 33
Q ss_pred EEEEecCCcEEEEEc
Q psy7482 283 LICITSAGDLVVWEL 297 (327)
Q Consensus 283 l~~~~~dg~v~iw~~ 297 (327)
|..++.++.=+||.+
T Consensus 336 lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 336 LYVLTDESSGELLKV 350 (353)
T ss_dssp EEEEECSTTEEEEEE
T ss_pred EEEEEeCCCCEEEEE
Confidence 333332222244444
No 323
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.75 E-value=0.0096 Score=47.12 Aligned_cols=256 Identities=11% Similarity=0.096 Sum_probs=155.1
Q ss_pred CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCC
Q psy7482 32 ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK 111 (327)
Q Consensus 32 ~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (327)
.+.+|.|-|+.++.......- .--+.-.+|..+.||.-. ..++.++|+++.+.++.+ .-. .. |..=.|-.+.
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi---~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~-~~~-e~-VvfWkWis~~- 118 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH-TMT-DD-VTFWKWISLN- 118 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEE-ECS-SC-EEEEEECSSS-
T ss_pred CCCEEEEEECCCCCCcccccc---ccceeeeCCCccEEEEec-CCeEEEechHHhhhhcce-ecC-Cc-cEEEEecCCC-
Confidence 344789999987655422211 112334588888777665 668999999999888877 332 33 7666776544
Q ss_pred EEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEeec--------CCeEEEEEecCCceeeEe
Q psy7482 112 LALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--------QNKAVVFSVEKAGVLQTL 182 (327)
Q Consensus 112 ~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~~i~i~d~~~~~~~~~~ 182 (327)
.|+..+. ..|+-|+++.. .+...+..+.. .....|..-..+++.++++..+ .|.+.+|..+.+.. +.+
T Consensus 119 ~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~-L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~i 195 (365)
T 2xzh_A 119 TVALVTD-NAVYHWSMEGESQPVKMFDRHSS-LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPI 195 (365)
T ss_dssp EEEEEES-SEEEEEESSTTCCCEEEEECCGG-GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE-EEE
T ss_pred eEEEEcC-CcEEEEcccCCCCCceeeecchh-cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc-cee
Confidence 5555554 57999999753 33333333322 2234577788888888766532 36788888775432 222
Q ss_pred c-CCCceeEEEeecC----ceEEEeC---CCCcEEEEEcCCC---cee------EEeee---cccceEEEEEEecCCCcE
Q psy7482 183 K-SESKVHSVCFLNE----TTVCTGN---EESAITAYNLTDG---SHL------WQIKA---SASRIKGLVFFSIPQETT 242 (327)
Q Consensus 183 ~-~~~~i~~~~~~~~----~~l~~~~---~d~~i~i~d~~~~---~~~------~~~~~---~~~~v~~~~~~~s~~~~~ 242 (327)
+ |......+....+ .+++.+. ..+.+++.++... .+. ..+-. ..+-..++.. ++.-..
T Consensus 196 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqv--s~kygv 273 (365)
T 2xzh_A 196 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI--SEKHDV 273 (365)
T ss_dssp CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEE--ETTTTE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEe--cccCCE
Confidence 2 3222222222111 2222222 2357888887432 111 11111 1222345555 367777
Q ss_pred EEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 243 VCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 243 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
+..-+.-|.|++||++++.++..-+-..++|..-+.+. .=++.....|.|.--.++..
T Consensus 274 iyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 274 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred EEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 88888899999999999999988887777776666554 56666678888777777665
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.74 E-value=0.01 Score=47.37 Aligned_cols=220 Identities=8% Similarity=0.005 Sum_probs=114.2
Q ss_pred eEEEecCCCcEEEEEcCCCeEEEeEEec-ccCCceeeEEEecCCCEEEEEeC----C-------CCEEEEEcCCCceeee
Q psy7482 68 HLISCSDDGSIAIFRVGSWQLEKLFKKA-HKGTAVNHISIHPSGKLALSVGK----D-------KTLRTWNLVKGRSAYI 135 (327)
Q Consensus 68 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~----d-------g~i~iwd~~~~~~~~~ 135 (327)
+++.|+ ..+..||..+++-.. .... .... ........++..++.|+. + ..+..||..+.+....
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPK-NHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCS-SEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCc-cceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 344555 469999998877543 2111 1112 233333457778888874 1 1277889888765443
Q ss_pred eeccccCccccceEEEEEccCCcEEEeec-C--------CeEEEEEecCCceee--EecCCCceeEEEeecCceEEEeCC
Q psy7482 136 TNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q--------NKAVVFSVEKAGVLQ--TLKSESKVHSVCFLNETTVCTGNE 204 (327)
Q Consensus 136 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~--------~~i~i~d~~~~~~~~--~~~~~~~i~~~~~~~~~~l~~~~~ 204 (327)
...+... .....+.+ ++++++.|+ + ..+.+||..+.+-.. .+.....-.+++...+..++.|+.
T Consensus 83 ~~~p~~r---~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 157 (315)
T 4asc_A 83 PPLPSPR---CLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGK 157 (315)
T ss_dssp CCBSSCE---ESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCCCcch---hceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCC
Confidence 3333221 11122222 566666654 2 458899988765322 222222223344444566677765
Q ss_pred ------CCcEEEEEcCCCceeE--EeeecccceEEEEEEecCCCcEEEEecCCC-----eEEEEEcCCCceeE--Eeecc
Q psy7482 205 ------ESAITAYNLTDGSHLW--QIKASASRIKGLVFFSIPQETTVCTGNEES-----AITAYNLTDGSHLW--HIKAS 269 (327)
Q Consensus 205 ------d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~-----~i~i~d~~~~~~~~--~~~~~ 269 (327)
-..+.+||..+.+-.. .+.... .-.+++. -+++.++.|+.++ .+.+||+.+.+-.. .+...
T Consensus 158 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 233 (315)
T 4asc_A 158 GSDRKCLNKMCVYDPKKFEWKELAPMQTAR-SLFGATV---HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQE 233 (315)
T ss_dssp CTTSCBCCCEEEEETTTTEEEECCCCSSCC-BSCEEEE---ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSC
T ss_pred CCCCcccceEEEEeCCCCeEEECCCCCCch-hceEEEE---ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCc
Confidence 2468899987754221 111111 1112222 3667777776554 58889987765221 11111
Q ss_pred cCceEEEeeeCcEEEEEecCC--------------cEEEEEccCc
Q psy7482 270 ASRIKGLASHRNHLICITSAG--------------DLVVWELNED 300 (327)
Q Consensus 270 ~~~v~~~~~~~~~l~~~~~dg--------------~v~iw~~~~~ 300 (327)
......+.+...+++.|+.++ .+.+||+.+.
T Consensus 234 r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 234 RSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred ccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 111122333337777777642 3677888776
No 325
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.70 E-value=0.003 Score=46.87 Aligned_cols=107 Identities=12% Similarity=0.133 Sum_probs=65.6
Q ss_pred eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc--CccccceEEEEEccCCcEEEeecCCeEEEEEecCCce
Q psy7482 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY--GVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGV 178 (327)
Q Consensus 101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~ 178 (327)
+..++|+|++.+.++ .+|.+.-.+..+.....-+..... ...-....++.|.|+|.+.++ +||.|+-++..+...
T Consensus 43 ~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~ 119 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDT 119 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTT
T ss_pred ceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCC
Confidence 889999998885555 678766666544222111111000 001112578999999999998 789988777543221
Q ss_pred ee------Eec--CCCceeEEEeecCceEEEeCCCCcEEEE
Q psy7482 179 LQ------TLK--SESKVHSVCFLNETTVCTGNEESAITAY 211 (327)
Q Consensus 179 ~~------~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~ 211 (327)
.. .+. .=..+..+.+.|++.|.+.. |+.++-.
T Consensus 120 ~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~ 159 (236)
T 1tl2_A 120 DNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKA 159 (236)
T ss_dssp CCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred CceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEec
Confidence 11 111 11467899999998777777 8875443
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.62 E-value=0.018 Score=46.56 Aligned_cols=220 Identities=12% Similarity=0.162 Sum_probs=118.5
Q ss_pred cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE-----ecccCCceeeEEEecC---CCEEEEE---eCCCCE
Q psy7482 54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK-----KAHKGTAVNHISIHPS---GKLALSV---GKDKTL 122 (327)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~---~~~l~~~---~~dg~i 122 (327)
-.....|+|.|+|+++++--..|.|++++...++...... ...... ...++++|+ +..|+.. ..++.|
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~G-llGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGG-LLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBS-EEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCC-ceeeEeccccccCCEEEEEEecCCCCEE
Confidence 3456899999999877776658999999866555422110 112334 789999995 3445443 234566
Q ss_pred EEEEcCCCc--------eeeee-eccccCccccceEEEEEccCCcEEEeec--------------CCeEEEEEecCC---
Q psy7482 123 RTWNLVKGR--------SAYIT-NLSSYGVGFENLDSVVWSPEGLLYAIPI--------------QNKAVVFSVEKA--- 176 (327)
Q Consensus 123 ~iwd~~~~~--------~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------------~~~i~i~d~~~~--- 176 (327)
.-|.+..+. ....+ .++....| ....+.|.|+|.++++.. .|.|.-++....
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~ 187 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAP 187 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCT
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccC
Confidence 666655421 11111 12222222 256799999998777643 245555554322
Q ss_pred ------ceeeEecCCCceeEEEeecCceEEEeCC--CCcEEEEEcCCCc------------------eeEEeeecccceE
Q psy7482 177 ------GVLQTLKSESKVHSVCFLNETTVCTGNE--ESAITAYNLTDGS------------------HLWQIKASASRIK 230 (327)
Q Consensus 177 ------~~~~~~~~~~~i~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~------------------~~~~~~~~~~~v~ 230 (327)
..+... .......++|+|++.|.++.. ++.-.+.-+..+. ++..+..+.....
T Consensus 188 ~nPf~~~~i~a~-G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~ 266 (347)
T 3das_A 188 GNPFPGSPVYSY-GHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPS 266 (347)
T ss_dssp TCSSTTCCEEEB-CCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEE
T ss_pred CCCCCCCeEEee-CCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCc
Confidence 111122 223466788988865555432 2222232222221 1222222223566
Q ss_pred EEEEEecCCCcEEEEecCCCeEEEEEcCCCce----eEEeecccCceEEEeeeC
Q psy7482 231 GLVFFSIPQETTVCTGNEESAITAYNLTDGSH----LWHIKASASRIKGLASHR 280 (327)
Q Consensus 231 ~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~ 280 (327)
.++|. ++..+...-..+.|....+..... ...+.+....+.+++..|
T Consensus 267 G~~~~---~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~p 317 (347)
T 3das_A 267 GIAYA---EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAG 317 (347)
T ss_dssp EEEEE---TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEE
T ss_pred ceEEE---cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECC
Confidence 77873 567676666666776667655432 222333345677777666
No 327
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.62 E-value=0.017 Score=47.56 Aligned_cols=147 Identities=12% Similarity=0.171 Sum_probs=92.3
Q ss_pred eCCCEEEEecCCCeEEEEEccccccccccccc----cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe----------
Q psy7482 22 ATSKLAASSGADETVVLYDMVKRKQSGALMQH----EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ---------- 87 (327)
Q Consensus 22 ~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---------- 87 (327)
-++..++.+- ++.||.-++.....-+.+... -..|..+..+|+|++||..+.. .|.|-.+..+.
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCccccccc
Confidence 3666666654 578888887754433333322 2257889999999999988755 78888876321
Q ss_pred --EEEeEEecc----cCCceeeEEEec---CCCEEEEEeCCCCEEEEEcCCCceeeeeecccc------CccccceEEEE
Q psy7482 88 --LEKLFKKAH----KGTAVNHISIHP---SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY------GVGFENLDSVV 152 (327)
Q Consensus 88 --~~~~~~~~~----~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~v~~~~ 152 (327)
..+.+..+. ...+|..+.|+| .+..|++-..|+.|++||+........ .+... ......+.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 112332221 123499999999 456899999999999999986332111 11111 11124588999
Q ss_pred EccCCcEEEe--ec-CCeEEEE
Q psy7482 153 WSPEGLLYAI--PI-QNKAVVF 171 (327)
Q Consensus 153 ~~~~~~~l~~--~~-~~~i~i~ 171 (327)
|.+++-.|.+ .+ +|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 9997754433 33 5666543
No 328
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.61 E-value=0.031 Score=50.03 Aligned_cols=196 Identities=9% Similarity=0.071 Sum_probs=106.7
Q ss_pred eCCCEEEEecCC----CeEEEEEcccccccccc--------ccccccEEEEEECCCCCeEEEecCC------CcEEEEEc
Q psy7482 22 ATSKLAASSGAD----ETVVLYDMVKRKQSGAL--------MQHEGTITCLKFTPEGSHLISCSDD------GSIAIFRV 83 (327)
Q Consensus 22 ~~~~~l~~~~~d----g~v~~w~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~ 83 (327)
.++.+++.||.+ ..+.+||..+++....- ......-.++.+..+++.++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 577888888754 46888998776433211 1111112233332267777787754 35888999
Q ss_pred CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccC-CcEE
Q psy7482 84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE-GLLY 160 (327)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l 160 (327)
.+.+....- .......-.+++...+++.++.|+.++ .+.+||..+.+..................++.+..+ ++++
T Consensus 476 ~t~~W~~~~-~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIK-SLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECC-CCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECC-CCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 875543321 111111012233324788888887654 699999988765443321111111111233555555 6676
Q ss_pred Eeec---C-----CeEEEEEecCCce-----eeEec----CCCceeEEEeec-CceEEEeCC--------CCcEEEEEcC
Q psy7482 161 AIPI---Q-----NKAVVFSVEKAGV-----LQTLK----SESKVHSVCFLN-ETTVCTGNE--------ESAITAYNLT 214 (327)
Q Consensus 161 ~~~~---~-----~~i~i~d~~~~~~-----~~~~~----~~~~i~~~~~~~-~~~l~~~~~--------d~~i~i~d~~ 214 (327)
+.|+ + +.+.+||+.+.+- ...+. ....-.+++... +..++.|+. ...+.+||+.
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 6664 2 4688999988761 12221 111122334445 566777763 3568999998
Q ss_pred CCce
Q psy7482 215 DGSH 218 (327)
Q Consensus 215 ~~~~ 218 (327)
+.+-
T Consensus 635 t~~W 638 (695)
T 2zwa_A 635 SETL 638 (695)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 7653
No 329
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.60 E-value=0.02 Score=46.61 Aligned_cols=234 Identities=12% Similarity=0.092 Sum_probs=116.0
Q ss_pred EeCCCEEEEecCC-CeEEEEEccc--cc--cccccc-cccccEEEEEECCCCCeEEEecC-C---------CcEEEEEcC
Q psy7482 21 AATSKLAASSGAD-ETVVLYDMVK--RK--QSGALM-QHEGTITCLKFTPEGSHLISCSD-D---------GSIAIFRVG 84 (327)
Q Consensus 21 ~~~~~~l~~~~~d-g~v~~w~~~~--~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------~~i~iw~~~ 84 (327)
..++.+++.|+.+ ..+.++|+.+ .+ .+..+. .....-.++.+ ++++++.|+. + ..+.+||..
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 3377777777643 4688888863 22 222222 11111222222 4667777776 2 468899998
Q ss_pred CCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---------------------------------------CCEEEE
Q psy7482 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---------------------------------------KTLRTW 125 (327)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------------------g~i~iw 125 (327)
+.+-...-....... ....+...++++++.|+.+ ..+.+|
T Consensus 95 ~~~W~~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 95 TNSWVKLMSHAPMGM-AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp TTEEEECSCCCSSCC-SSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred CCcEEECCCCCCccc-ccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 766443321110111 1222222567777888754 478899
Q ss_pred EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-------CCeEEEEEe--cCCceee--EecCCC-c-eeEEE
Q psy7482 126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-------QNKAVVFSV--EKAGVLQ--TLKSES-K-VHSVC 192 (327)
Q Consensus 126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~~i~i~d~--~~~~~~~--~~~~~~-~-i~~~~ 192 (327)
|+.+.+.......+..... -.+++.. ++++++.|+ ...+..||+ .+.+-.. .+.... . -.+++
T Consensus 174 d~~~~~W~~~~~~p~~~~~---~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~ 249 (357)
T 2uvk_A 174 DPSTQQWSYAGESPWYGTA---GAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAG 249 (357)
T ss_dssp ETTTTEEEEEEECSSCCCB---SCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEE
T ss_pred eCCCCcEEECCCCCCCCcc---cccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEE
Confidence 9988776555443322110 0222222 566666654 235677776 3332211 111111 1 12244
Q ss_pred eecCceEEEeCCC----------------------CcEEEEEcCCCce--eEEeeecccceEEEEEEecCCCcEEEEecC
Q psy7482 193 FLNETTVCTGNEE----------------------SAITAYNLTDGSH--LWQIKASASRIKGLVFFSIPQETTVCTGNE 248 (327)
Q Consensus 193 ~~~~~~l~~~~~d----------------------~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~ 248 (327)
...+.+++.|+.+ ..+.+||+.+.+- +..+......- .++. .+++.++.|+.
T Consensus 250 ~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~---~~~~i~v~GG~ 325 (357)
T 2uvk_A 250 ISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYG-VSLP---WNNSLLIIGGE 325 (357)
T ss_dssp EETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSS-EEEE---ETTEEEEEEEE
T ss_pred EECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccc-eeEE---eCCEEEEEeee
Confidence 4445667777632 2577899876542 22222111111 2222 46777777775
Q ss_pred CC------eEEEEEcCCCceeEE
Q psy7482 249 ES------AITAYNLTDGSHLWH 265 (327)
Q Consensus 249 d~------~i~i~d~~~~~~~~~ 265 (327)
++ .+.++++++++.+..
T Consensus 326 ~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 326 TAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CGGGCEEEEEEEEEC-CCSCEEE
T ss_pred CCCCCEeeeEEEEEEcCcEeEee
Confidence 42 466678877775543
No 330
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.52 E-value=0.028 Score=46.41 Aligned_cols=266 Identities=12% Similarity=0.107 Sum_probs=161.1
Q ss_pred CCCEEEE---ecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCC
Q psy7482 23 TSKLAAS---SGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT 99 (327)
Q Consensus 23 ~~~~l~~---~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 99 (327)
..+++.. .+.+..|.|-|+.++.......- .--+.-.+|..+.||.-. ..++.|+|+++.+.++.+ .-.. .
T Consensus 34 SDkyicVrE~~~~~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~-~~~e-~ 107 (494)
T 1bpo_A 34 SDKFICIREKVGEQAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH-TMTD-D 107 (494)
T ss_dssp ETTEEEEEECCTTCCEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEE-ECSS-C
T ss_pred cCceEEEEecCCCCCeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcce-ecCC-C
Confidence 3445543 23345799999988655422211 112344688888777665 678999999999888877 3333 3
Q ss_pred ceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEeec--------CCeEEE
Q psy7482 100 AVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--------QNKAVV 170 (327)
Q Consensus 100 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~~i~i 170 (327)
|..=.|-.+. .|+..+ +..|+-|++... .+...+..+.. .....|..-..+++.++++..+ .|.+.+
T Consensus 108 -VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~-L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQL 183 (494)
T 1bpo_A 108 -VTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSS-LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 183 (494)
T ss_dssp -CCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGG-GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEE
T ss_pred -ceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchh-cccceEEEEEECCCCCeEEEEeecccCCcccceEEE
Confidence 6666676544 555554 367999999753 33333333222 2234577888889998776432 367888
Q ss_pred EEecCCceeeEecCCCceeEEEeecC----ceEEEeC---CCCcEEEEEcCCC---cee-----EE-e-e--ecccceEE
Q psy7482 171 FSVEKAGVLQTLKSESKVHSVCFLNE----TTVCTGN---EESAITAYNLTDG---SHL-----WQ-I-K--ASASRIKG 231 (327)
Q Consensus 171 ~d~~~~~~~~~~~~~~~i~~~~~~~~----~~l~~~~---~d~~i~i~d~~~~---~~~-----~~-~-~--~~~~~v~~ 231 (327)
|..+.+.....-.|......+....+ ..++.+. ..+.+++.++... .+. .. + . ...+-..+
T Consensus 184 YS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPva 263 (494)
T 1bpo_A 184 YSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 263 (494)
T ss_dssp EESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEE
T ss_pred eeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeE
Confidence 98775543222223333333333211 2233222 2378888888432 111 11 1 1 11222345
Q ss_pred EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
+.. ++.-..+..-+.-|.|.+||+.++.++..-+-..++|..-+.+. .=++.....|.|.--.++..
T Consensus 264 mqv--s~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 264 MQI--SEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEE--ETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred EEe--cccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 555 37777888888899999999999999988887777776666554 56666668888777666665
No 331
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.50 E-value=0.026 Score=45.71 Aligned_cols=193 Identities=12% Similarity=0.099 Sum_probs=109.5
Q ss_pred cEEEEEECCCCCeEEEec------------CCCcEEEEEcCC--CeEEEeEE-ec-----ccCCceeeEEEec--CCC-E
Q psy7482 56 TITCLKFTPEGSHLISCS------------DDGSIAIFRVGS--WQLEKLFK-KA-----HKGTAVNHISIHP--SGK-L 112 (327)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~------------~d~~i~iw~~~~--~~~~~~~~-~~-----~~~~~v~~~~~~~--~~~-~ 112 (327)
....+...|+|..+++++ .+|.|.++|.++ ++.. .+. .+ ..-. ...+.+.+ ++. +
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~-~l~~~g~~~~~~~f~-PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVS-ELEIIGNTLDISSFN-PHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEE-ECEEECSSCCGGGCC-EEEEEEEECTTCCEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceE-EEEccCCCCCcCcee-eeeeEEEECCCCcEE
Confidence 345666788775555542 689999999873 2322 221 22 1123 67778766 343 4
Q ss_pred EEEEe-C--CCCEEEEEcCCC--ceeeeeeccccCccccceEEEEEccCCcEEEeec------------------CCeEE
Q psy7482 113 ALSVG-K--DKTLRTWNLVKG--RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI------------------QNKAV 169 (327)
Q Consensus 113 l~~~~-~--dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------------~~~i~ 169 (327)
|+.+. . +.++.+|+++.. ........... .....+.+.+.++|.++++.. .|.++
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~--~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK--LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCT--TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccC--CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 54443 2 456778776543 22222222222 234588999999998777642 13455
Q ss_pred EEEecCCceeeEecCCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCC-Cce--eEEeeecccceEEEEEEecC-CCcEE
Q psy7482 170 VFSVEKAGVLQTLKSESKVHSVCFLNE-TTV-CTGNEESAITAYNLTD-GSH--LWQIKASASRIKGLVFFSIP-QETTV 243 (327)
Q Consensus 170 i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~s~-~~~~l 243 (327)
.+|. ++.......-...+.++|+|| +.+ ++-+..+.|..|++.. ++. ...+ ...+..-.+++ ++ +|.+.
T Consensus 207 r~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~v--D~e~G~lw 281 (355)
T 3sre_A 207 YYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISV--DPVTGDLW 281 (355)
T ss_dssp EECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEE--CTTTCCEE
T ss_pred EEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEE--eCCCCcEE
Confidence 5554 333323334456889999999 444 4556778999999864 322 1223 22344566777 46 48877
Q ss_pred EEecCC-CeEEEEEc
Q psy7482 244 CTGNEE-SAITAYNL 257 (327)
Q Consensus 244 ~~~~~d-~~i~i~d~ 257 (327)
+++..+ +.|..|+.
T Consensus 282 va~~~~g~~v~~~~P 296 (355)
T 3sre_A 282 VGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEEESCHHHHHSCCT
T ss_pred EEecCCceEEEEECC
Confidence 765433 34444443
No 332
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.50 E-value=0.027 Score=45.81 Aligned_cols=220 Identities=15% Similarity=0.156 Sum_probs=117.6
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEccccc-ccccc---ccccccEEEEEECCC---CCeEEEecC----C----Cc
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRK-QSGAL---MQHEGTITCLKFTPE---GSHLISCSD----D----GS 77 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~-~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~~----d----~~ 77 (327)
.....|+| +++++++ ..+|.|++++ .+++ .+..+ .........|+++|+ +..|.++.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 44678888 7775554 5569999997 3444 22211 112356889999997 445544432 2 56
Q ss_pred EEEEEcCCC--e---E--E-EeEEecccCCceeeEEEecCCCEEEEEeCC-------------CCEEEEEcCCCce----
Q psy7482 78 IAIFRVGSW--Q---L--E-KLFKKAHKGTAVNHISIHPSGKLALSVGKD-------------KTLRTWNLVKGRS---- 132 (327)
Q Consensus 78 i~iw~~~~~--~---~--~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~---- 132 (327)
|..|+.... . . + ..+....... ...+.|.|||.+.++.+.. |.|.-++.. ++.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~-~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~n 184 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHN-GGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADN 184 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCC-CCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcC-CceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCC
Confidence 777776543 1 1 1 1121111112 5679999999866664321 345555543 220
Q ss_pred ----eeeeeccccCccccceEEEEEcc-CCcEEEeec--C--CeEEEEEecCCc------------------eeeEe-cC
Q psy7482 133 ----AYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI--Q--NKAVVFSVEKAG------------------VLQTL-KS 184 (327)
Q Consensus 133 ----~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~--~~i~i~d~~~~~------------------~~~~~-~~ 184 (327)
...+.. .......++|+| ++.++++-. + ..|.+.. .+. ++..+ ..
T Consensus 185 pf~~~~i~a~-----G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~ 257 (354)
T 3a9g_A 185 PFPNSPIWSY-----GHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSE 257 (354)
T ss_dssp SSTTCCEEEE-----CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTC
T ss_pred CCCCCcEEEE-----ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCC
Confidence 011110 112267899999 677666543 2 2344332 221 22333 23
Q ss_pred CCceeEEEee-------cC-ceEEEeCCCCcEEEEEcCCC-cee--EEee-ecccceEEEEEEecCCCcEEEEec
Q psy7482 185 ESKVHSVCFL-------NE-TTVCTGNEESAITAYNLTDG-SHL--WQIK-ASASRIKGLVFFSIPQETTVCTGN 247 (327)
Q Consensus 185 ~~~i~~~~~~-------~~-~~l~~~~~d~~i~i~d~~~~-~~~--~~~~-~~~~~v~~~~~~~s~~~~~l~~~~ 247 (327)
...+..+++. .+ .++++....+.|...++... +.. ..+. .....+..+++ .|+|.+.++..
T Consensus 258 ~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~--~pDG~lyv~~~ 330 (354)
T 3a9g_A 258 TWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVI--DDDGGILISTS 330 (354)
T ss_dssp CCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEE--CTTSCEEEEEC
T ss_pred CcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEE--CCCCcEEEEEe
Confidence 3457778873 23 44555556678888888753 221 1221 22346778887 47887666553
No 333
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.49 E-value=0.011 Score=48.55 Aligned_cols=140 Identities=15% Similarity=0.202 Sum_probs=86.6
Q ss_pred EccCCcEEEeecCCeEEEEEecCCceeeEecCC-----CceeEEEeecCceEEEeCCCCcEEEEEcCCCc----------
Q psy7482 153 WSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSE-----SKVHSVCFLNETTVCTGNEESAITAYNLTDGS---------- 217 (327)
Q Consensus 153 ~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~-----~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------- 217 (327)
...+|.-++.+.++.||.-++......+.+..+ ..+..+..+|++.+++-..+..|.|..+..+.
T Consensus 28 ~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 28 SSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp EETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHH
T ss_pred EEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccc
Confidence 344666666666778887777654444454432 25778888888555555566678888876321
Q ss_pred --eeEEeee------cccceEEEEEEe-cCCCcEEEEecCCCeEEEEEcCCCc--eeEEee---------cccCceEEEe
Q psy7482 218 --HLWQIKA------SASRIKGLVFFS-IPQETTVCTGNEESAITAYNLTDGS--HLWHIK---------ASASRIKGLA 277 (327)
Q Consensus 218 --~~~~~~~------~~~~v~~~~~~~-s~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~---------~~~~~v~~~~ 277 (327)
..+.+.- ...+|..+.|+| +..+..|++-..|+.|++||+.... +. .+. .....|.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 1122222 246799999984 2346689999999999999998532 22 332 1224677788
Q ss_pred eeC----cEEEEEecCCcEE
Q psy7482 278 SHR----NHLICITSAGDLV 293 (327)
Q Consensus 278 ~~~----~~l~~~~~dg~v~ 293 (327)
|.+ -++++.+..|.|+
T Consensus 187 Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEE
T ss_pred EcCCCcEEEEEecCCCCCEE
Confidence 877 2333344556554
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.45 E-value=0.029 Score=44.86 Aligned_cols=221 Identities=12% Similarity=0.093 Sum_probs=111.1
Q ss_pred eEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC----CC-------CEEEEEcCCCceeeee
Q psy7482 68 HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK----DK-------TLRTWNLVKGRSAYIT 136 (327)
Q Consensus 68 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~i~iwd~~~~~~~~~~ 136 (327)
.++.|+. .+..||..+.+....- ...............++..++.|+. ++ .+..||..+.+.....
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~-~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTA-LAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEE-ECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceeccc-CCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 3445553 3889999887754421 1111111222333456778888873 12 1778888877664443
Q ss_pred eccccCccccceEEEEEccCCcEEEeec-C-------CeEEEEEecCCceeeEec--CCCceeEEEeecCceEEEeCC--
Q psy7482 137 NLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-------NKAVVFSVEKAGVLQTLK--SESKVHSVCFLNETTVCTGNE-- 204 (327)
Q Consensus 137 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-------~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~-- 204 (327)
..+.... ....+.+ ++++++.|+ + ..+.+||..+.+-...-. ....-.+++...+..++.|+.
T Consensus 95 ~~p~~r~---~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 169 (318)
T 2woz_A 95 PLPSARC---LFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTD 169 (318)
T ss_dssp CBSSCBC---SCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEES
T ss_pred CCCcccc---ccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCC
Confidence 3332211 1222222 566666664 3 357888887765333222 111112333334456666653
Q ss_pred ----CCcEEEEEcCCCceeEE--eeecccceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCce--eEEeecccC
Q psy7482 205 ----ESAITAYNLTDGSHLWQ--IKASASRIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGSH--LWHIKASAS 271 (327)
Q Consensus 205 ----d~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~--~~~~~~~~~ 271 (327)
-..+.+||+.+.+-... +.... .-.+++. -+++.++.|+.+ ..+.+||+.+.+- +..+.....
T Consensus 170 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 245 (318)
T 2woz_A 170 DKKCTNRVFIYNPKKGDWKDLAPMKTPR-SMFGVAI---HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS 245 (318)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCC-BSCEEEE---ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB
T ss_pred CCCccceEEEEcCCCCEEEECCCCCCCc-ccceEEE---ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc
Confidence 24589999887643221 11111 1112333 366777777643 3577899877652 211211111
Q ss_pred ceEEEeeeCcEEEEEecC--------------CcEEEEEccCc
Q psy7482 272 RIKGLASHRNHLICITSA--------------GDLVVWELNED 300 (327)
Q Consensus 272 ~v~~~~~~~~~l~~~~~d--------------g~v~iw~~~~~ 300 (327)
....+.+...+++.|+.+ ..+.+||+.+.
T Consensus 246 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 246 SISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp SCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred ceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 112222333677777654 34778888776
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.36 E-value=0.042 Score=44.67 Aligned_cols=227 Identities=10% Similarity=0.041 Sum_probs=111.5
Q ss_pred CCCeEEEecCC-CcEEEEEcCC--CeEEEeEEecc-cCCceeeEEEecCCCEEEEEeC-C---------CCEEEEEcCCC
Q psy7482 65 EGSHLISCSDD-GSIAIFRVGS--WQLEKLFKKAH-KGTAVNHISIHPSGKLALSVGK-D---------KTLRTWNLVKG 130 (327)
Q Consensus 65 ~~~~l~~~~~d-~~i~iw~~~~--~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d---------g~i~iwd~~~~ 130 (327)
++..++.|+.+ ..+.++|... .+.. .+.... ....-.+++. -++++++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~-~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWT-ALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEE-ECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCee-ECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666666543 4688888863 2222 121111 1110112222 25667777765 2 46889999887
Q ss_pred ceeeeeeccccCccccceEEEEEccCCcEEEeec-C---------------------------------------CeEEE
Q psy7482 131 RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q---------------------------------------NKAVV 170 (327)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---------------------------------------~~i~i 170 (327)
+........... .....++. .++++++.|+ + ..+.+
T Consensus 97 ~W~~~~~~~p~~--r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (357)
T 2uvk_A 97 SWVKLMSHAPMG--MAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLS 172 (357)
T ss_dssp EEEECSCCCSSC--CSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEE
T ss_pred cEEECCCCCCcc--cccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEE
Confidence 655443333110 11122222 5677777765 2 57899
Q ss_pred EEecCCceeeE--ecCCCce-eEEEeecCceEEEeCC------CCcEEEEEc--CCCce--eEEeeecccceE-EEEEEe
Q psy7482 171 FSVEKAGVLQT--LKSESKV-HSVCFLNETTVCTGNE------ESAITAYNL--TDGSH--LWQIKASASRIK-GLVFFS 236 (327)
Q Consensus 171 ~d~~~~~~~~~--~~~~~~i-~~~~~~~~~~l~~~~~------d~~i~i~d~--~~~~~--~~~~~~~~~~v~-~~~~~~ 236 (327)
||..+.+-... +.....- .+++...+.+++.|+. ...+..||+ .+.+- +..+........ +++.
T Consensus 173 yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~-- 250 (357)
T 2uvk_A 173 FDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI-- 250 (357)
T ss_dssp EETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE--
T ss_pred EeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE--
Confidence 99887653332 2222222 4455555566777663 345777876 33221 111111111111 1333
Q ss_pred cCCCcEEEEecCC----------------------CeEEEEEcCCCc--eeEEeecccCceEEEeeeCcEEEEEecCC--
Q psy7482 237 IPQETTVCTGNEE----------------------SAITAYNLTDGS--HLWHIKASASRIKGLASHRNHLICITSAG-- 290 (327)
Q Consensus 237 s~~~~~l~~~~~d----------------------~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~l~~~~~dg-- 290 (327)
.++++++.|+.+ ..+.+||+.+.+ .+..+......-.++.+...+++.|+.++
T Consensus 251 -~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 329 (357)
T 2uvk_A 251 -SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGG 329 (357)
T ss_dssp -ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGG
T ss_pred -ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCC
Confidence 467777777732 257889987665 33333322222223334447778888653
Q ss_pred ----cEEEEEccCc
Q psy7482 291 ----DLVVWELNED 300 (327)
Q Consensus 291 ----~v~iw~~~~~ 300 (327)
.|.+++++++
T Consensus 330 ~~~~~v~~l~~~~~ 343 (357)
T 2uvk_A 330 KAVTDSVLITVKDN 343 (357)
T ss_dssp CEEEEEEEEEC-CC
T ss_pred CEeeeEEEEEEcCc
Confidence 2555577766
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.28 E-value=0.0088 Score=44.44 Aligned_cols=145 Identities=13% Similarity=0.072 Sum_probs=82.3
Q ss_pred ceEEEEEccCCcEEEeecCCeEEEEEecCCce------eeEec--CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCce
Q psy7482 147 NLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGV------LQTLK--SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSH 218 (327)
Q Consensus 147 ~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~------~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 218 (327)
.+..++|+|++.+.++ .+|.++-.+..+.+. -..+. .-....++.|.|++.|.+. .||.|+-++-.+...
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~ 119 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDT 119 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTT
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCC
Confidence 4789999999998888 888877777655222 12221 1112478899999776666 669888777533211
Q ss_pred e------EEe-eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc------eeEEee-cccCceEEEeeeC-cEE
Q psy7482 219 L------WQI-KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS------HLWHIK-ASASRIKGLASHR-NHL 283 (327)
Q Consensus 219 ~------~~~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~------~~~~~~-~~~~~v~~~~~~~-~~l 283 (327)
- ..+ ..--..+..|.+ .|+|.+.++. |+.++-.....+. ....+. ..-..-+-+.|.+ ..|
T Consensus 120 ~~Wl~~a~~vg~~gw~~~~~lff--~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l 195 (236)
T 1tl2_A 120 DNWIARATEVGSGGWSGFKFLFF--HPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL 195 (236)
T ss_dssp CCHHHHSEEEECSSGGGEEEEEE--CTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE
T ss_pred CceeccccEeccCCCCceEEEEE--CCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcE
Confidence 1 111 111135677777 4899888887 6775433322211 111111 2222344466777 545
Q ss_pred EEEecCCcEEEEEccCc
Q psy7482 284 ICITSAGDLVVWELNED 300 (327)
Q Consensus 284 ~~~~~dg~v~iw~~~~~ 300 (327)
..+. +| ++|....+
T Consensus 196 ~~v~-~g--~~Y~~~~p 209 (236)
T 1tl2_A 196 FGVQ-GG--KFYEDYPP 209 (236)
T ss_dssp EEEE-TT--EEEEESCC
T ss_pred EEEe-CC--eEEecCCc
Confidence 5555 66 45554443
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.21 E-value=0.06 Score=43.48 Aligned_cols=229 Identities=13% Similarity=0.156 Sum_probs=123.6
Q ss_pred CccEEEEEe--CCCEEEEecCCCeEEEEEcccccc--ccc----cccccccEEEEEECCC---CCeEEEe---cCCCcEE
Q psy7482 14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ--SGA----LMQHEGTITCLKFTPE---GSHLISC---SDDGSIA 79 (327)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~--~~~----~~~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~ 79 (327)
-...+.|+| +|.++++--..|.|++++..+++. +.. +.........|+++|+ +..|... ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 345678888 788777765589999998655542 211 1223566899999995 3444432 2344566
Q ss_pred EEEcCCC----------eEE-EeEEecccCCceeeEEEecCCCEEEEEeC-------------CCCEEEEEcCCCceeee
Q psy7482 80 IFRVGSW----------QLE-KLFKKAHKGTAVNHISIHPSGKLALSVGK-------------DKTLRTWNLVKGRSAYI 135 (327)
Q Consensus 80 iw~~~~~----------~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~~~~~ 135 (327)
-|....+ +.+ ..+....... -..|.|.|||.+.++.+. .|.|.-.+.. ++...-
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~-g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~ 188 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHN-GGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPG 188 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCC-CCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTT
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCcc-CccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCccCC
Confidence 6665441 111 1121111122 567999999987777543 2445545543 221000
Q ss_pred eec---cccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCc------------------eeeEecCC-CceeEE
Q psy7482 136 TNL---SSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAG------------------VLQTLKSE-SKVHSV 191 (327)
Q Consensus 136 ~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~------------------~~~~~~~~-~~i~~~ 191 (327)
-++ ............++|+|++.++++-. ++.=.+.-+..+. ++..+.+. .....+
T Consensus 189 nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~ 268 (347)
T 3das_A 189 NPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGI 268 (347)
T ss_dssp CSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEE
T ss_pred CCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcce
Confidence 000 00001112367899999888777653 3322222222222 12222222 356677
Q ss_pred EeecCceEEEeCCCCcEEEEEcCCCce----eEEeeecccceEEEEEEecCCCcEEEEe
Q psy7482 192 CFLNETTVCTGNEESAITAYNLTDGSH----LWQIKASASRIKGLVFFSIPQETTVCTG 246 (327)
Q Consensus 192 ~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~s~~~~~l~~~ 246 (327)
+|.....++..-..+.|....+..... ...+.+....+..++.. |+|.++++.
T Consensus 269 ~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~--pDG~lyv~t 325 (347)
T 3das_A 269 AYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPA--GGDKLWLVT 325 (347)
T ss_dssp EEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEE--ETTEEEEEE
T ss_pred EEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEEC--CCCcEEEEE
Confidence 887655666666667777777655432 12233334678888885 788766654
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.20 E-value=0.066 Score=45.20 Aligned_cols=107 Identities=15% Similarity=0.208 Sum_probs=61.7
Q ss_pred ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEec-------ccCCceeeEEEecC---CCEEEEEeC------
Q psy7482 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA-------HKGTAVNHISIHPS---GKLALSVGK------ 118 (327)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~---~~~l~~~~~------ 118 (327)
.....|+|.|+|+++++-...+.|++++..+++........ .... ...|+|+|+ +..|+.+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~G-llgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNG-LLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCS-EEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCc-eeEEEECCCcCcCCEEEEEEeccccCC
Confidence 34679999999987776554457888876555433221111 1233 779999995 555555442
Q ss_pred -------CCCEEEEEcCCC--c---eeeee-eccccCccccceEEEEEccCCcEEEeec
Q psy7482 119 -------DKTLRTWNLVKG--R---SAYIT-NLSSYGVGFENLDSVVWSPEGLLYAIPI 164 (327)
Q Consensus 119 -------dg~i~iwd~~~~--~---~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 164 (327)
...|.-++...+ + ....+ .......| ....+.|.|+|.++++..
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H--~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDH--QSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSC--CEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCC--CCCeEeECCCCeEEEEEC
Confidence 134666665432 1 11111 12222222 378999999998777643
No 339
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.16 E-value=0.02 Score=54.49 Aligned_cols=214 Identities=12% Similarity=0.125 Sum_probs=132.0
Q ss_pred CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEE
Q psy7482 74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW 153 (327)
Q Consensus 74 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 153 (327)
...+|.|-|+.+++.+... .-. .-+...+|..+.++.-. ..++.++|+++.+.+....+... |.-=.|
T Consensus 46 ~~~~vvIidl~~~~~~~rr--pi~---AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~------VvfWkW 113 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRR--PIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD------VTFWKW 113 (1630)
T ss_pred CCceEEEEECCCCCCcccc--ccc---chhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCC------ceEEEe
Confidence 3447899999876654222 111 23345788777776654 68899999998887776666554 666666
Q ss_pred ccCCcEEEeecCCeEEEEEecC-CceeeEec-----CCCceeEEEeecC-ceEEE-e------CCCCcEEEEEcCCCcee
Q psy7482 154 SPEGLLYAIPIQNKAVVFSVEK-AGVLQTLK-----SESKVHSVCFLNE-TTVCT-G------NEESAITAYNLTDGSHL 219 (327)
Q Consensus 154 ~~~~~~l~~~~~~~i~i~d~~~-~~~~~~~~-----~~~~i~~~~~~~~-~~l~~-~------~~d~~i~i~d~~~~~~~ 219 (327)
-. .+.++..++..|+-|++.. ..+.+.+. ....|..-..+++ ..++. | ...|.+.+|+.+.+ ..
T Consensus 114 is-~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~s 191 (1630)
T 1xi4_A 114 IS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VS 191 (1630)
T ss_pred cC-CCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cc
Confidence 54 3466777789999999974 33444443 2456766777777 54442 2 24578899998654 34
Q ss_pred EEeeecccceEEEEEEecCCC-cEEEEec---CCCeEEEEEcCCC---ceeEE------ee---cccCceEEEeeeC--c
Q psy7482 220 WQIKASASRIKGLVFFSIPQE-TTVCTGN---EESAITAYNLTDG---SHLWH------IK---ASASRIKGLASHR--N 281 (327)
Q Consensus 220 ~~~~~~~~~v~~~~~~~s~~~-~~l~~~~---~d~~i~i~d~~~~---~~~~~------~~---~~~~~v~~~~~~~--~ 281 (327)
+.+.+|.+....+.....+.. ..++.+. ..+.++|.++... .+... +- ...+-..++..++ .
T Consensus 192 Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g 271 (1630)
T 1xi4_A 192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 271 (1630)
T ss_pred hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC
Confidence 556677665544443211122 2222222 2368889888543 11111 11 1123345666777 7
Q ss_pred EEEEEecCCcEEEEEccCcc
Q psy7482 282 HLICITSAGDLVVWELNEDV 301 (327)
Q Consensus 282 ~l~~~~~dg~v~iw~~~~~~ 301 (327)
.+...+.-|.+.++|+.++.
T Consensus 272 ~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 272 VVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred EEEEEecCceEEEEecccch
Confidence 88889999999999999873
No 340
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.04 E-value=0.094 Score=42.63 Aligned_cols=229 Identities=10% Similarity=0.094 Sum_probs=118.1
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEccccccc---ccc----ccccccEEEEEECCC---CCeEEEec-C-------
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS---GAL----MQHEGTITCLKFTPE---GSHLISCS-D------- 74 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~l~~~~-~------- 74 (327)
.....|+| +|+.|+.+...|.|++++.. ++.. ..+ .........++++|+ +..|..+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 34678888 77724445567999999853 3321 111 112345789999995 44444432 2
Q ss_pred CCcEEEEEcCCC--e--EEEeEEec------ccCCceeeEEEecCCCEEEEEeCC-------------CCEEEEEcCCCc
Q psy7482 75 DGSIAIFRVGSW--Q--LEKLFKKA------HKGTAVNHISIHPSGKLALSVGKD-------------KTLRTWNLVKGR 131 (327)
Q Consensus 75 d~~i~iw~~~~~--~--~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~ 131 (327)
...|..++.... . ....+... .... ...+.|.|||.+.++.+.. |.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~-~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF-GGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC-CCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCccc-CccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235666666432 1 11111011 1112 4679999999655554332 356666654210
Q ss_pred ------------eeeeeeccccCccccceEEEEEcc-CCcEEEeec--CCeEEEEEecCCc-------------------
Q psy7482 132 ------------SAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI--QNKAVVFSVEKAG------------------- 177 (327)
Q Consensus 132 ------------~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~~~i~i~d~~~~~------------------- 177 (327)
....+.. .......++|+| ++.++++-. ++.=.+.-+..+.
T Consensus 176 p~~npf~~~~~~~~~i~a~-----G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~ 250 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSY-----GIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIP 250 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEE-----CCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCT
T ss_pred CCCCCCcCCCCCCccEEEE-----cCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccC
Confidence 0111111 112378899999 666665543 2111221111111
Q ss_pred ------------eeeEecCCCceeEEEeec-------C-ceEEEeCCCCcEEEEEcCCCceeEE--e-eecccceEEEEE
Q psy7482 178 ------------VLQTLKSESKVHSVCFLN-------E-TTVCTGNEESAITAYNLTDGSHLWQ--I-KASASRIKGLVF 234 (327)
Q Consensus 178 ------------~~~~~~~~~~i~~~~~~~-------~-~~l~~~~~d~~i~i~d~~~~~~~~~--~-~~~~~~v~~~~~ 234 (327)
+...+.+...+..+.|.. + .++++....+.|...++..++.... + ......+..+++
T Consensus 251 ~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 251 EAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT 330 (353)
T ss_dssp TCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred cccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence 112223334566777753 2 4555556777888888776543322 1 122346788888
Q ss_pred EecCCCcEEEEec-CCCeE
Q psy7482 235 FSIPQETTVCTGN-EESAI 252 (327)
Q Consensus 235 ~~s~~~~~l~~~~-~d~~i 252 (327)
.|+|.++++.. .+|.|
T Consensus 331 --~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 331 --GPDGYLYVLTDESSGEL 347 (353)
T ss_dssp --CTTSCEEEEECSTTEEE
T ss_pred --CCCCcEEEEEeCCCCEE
Confidence 48888666533 34433
No 341
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.91 E-value=0.12 Score=41.82 Aligned_cols=162 Identities=12% Similarity=0.113 Sum_probs=92.4
Q ss_pred CCCeEEEEEcccc--ccc-ccccc-----ccccEEEEEECC--CCC-eEEEe-cC--CCcEEEEEcCCC--e--EEEeEE
Q psy7482 32 ADETVVLYDMVKR--KQS-GALMQ-----HEGTITCLKFTP--EGS-HLISC-SD--DGSIAIFRVGSW--Q--LEKLFK 93 (327)
Q Consensus 32 ~dg~v~~w~~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~~~-~l~~~-~~--d~~i~iw~~~~~--~--~~~~~~ 93 (327)
.+|.|.++|..+. +.. ..+.+ ..-....+.+.+ ++. +|+++ .. +.+|.+|+++.. . .+..+
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~- 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI- 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE-
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc-
Confidence 6899999998732 211 11211 223456666655 343 34443 22 567888877543 2 22233
Q ss_pred ecccCCceeeEEEecCCCEEEEEeC-----------------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC
Q psy7482 94 KAHKGTAVNHISIHPSGKLALSVGK-----------------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE 156 (327)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~-----------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 156 (327)
.+..-...+.+.+.++|.+.++... .|.|.-+|. ++......-- ...+.++|+||
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l------~~pNGia~spD 231 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGF------DFANGINISPD 231 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEE------SSEEEEEECTT
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCC------cccCcceECCC
Confidence 2222223789999999987766531 234555554 3222111111 22789999999
Q ss_pred CcEEEeec--CCeEEEEEecC-Cce--eeEecCCCceeEEEeec-CceEEEe
Q psy7482 157 GLLYAIPI--QNKAVVFSVEK-AGV--LQTLKSESKVHSVCFLN-ETTVCTG 202 (327)
Q Consensus 157 ~~~l~~~~--~~~i~i~d~~~-~~~--~~~~~~~~~i~~~~~~~-~~~l~~~ 202 (327)
++.+.++. .+.|..|++.. ++. ...+........+++.+ ++.+.++
T Consensus 232 g~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 232 GKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEE
T ss_pred CCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEE
Confidence 98777764 78999999864 322 22333456678888888 4655553
No 342
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.86 E-value=0.28 Score=47.04 Aligned_cols=257 Identities=12% Similarity=0.101 Sum_probs=142.6
Q ss_pred CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCC
Q psy7482 32 ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK 111 (327)
Q Consensus 32 ~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (327)
...+|.|-|+.++..+.... -.--+.-.+|..+.||.-. ..++.|+|+++.+.++.+ .-. .. |..=.|-.+.
T Consensus 46 ~~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~-~~~-e~-VvfWkWis~~- 117 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH-TMT-DD-VTFWKWISLN- 117 (1630)
T ss_pred CCceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhccc-ccC-CC-ceEEEecCCC-
Confidence 34479999998865442211 1122334678777777654 678999999988777766 222 23 6655666443
Q ss_pred EEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEeec--------CCeEEEEEecCCceeeEe
Q psy7482 112 LALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--------QNKAVVFSVEKAGVLQTL 182 (327)
Q Consensus 112 ~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~~i~i~d~~~~~~~~~~ 182 (327)
.|+..+ +..|.-|++... .+...+..+.. .....|..-..+++.++++..+ .|.+.+|..+.+.....-
T Consensus 118 ~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~-L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ie 195 (1630)
T 1xi4_A 118 TVALVT-DNAVYHWSMEGESQPVKMFDRHSS-LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE 195 (1630)
T ss_pred eeEEEc-CCeEEEeccCCCCccHHHHhcchh-cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhh
Confidence 454444 357999999642 22222222211 1123477777888888766432 378888887654321111
Q ss_pred cCCCceeEEEeec--C--ceEEEeC---CCCcEEEEEcCCC---ceeEE-------eee--cccceEEEEEEecCCCcEE
Q psy7482 183 KSESKVHSVCFLN--E--TTVCTGN---EESAITAYNLTDG---SHLWQ-------IKA--SASRIKGLVFFSIPQETTV 243 (327)
Q Consensus 183 ~~~~~i~~~~~~~--~--~~l~~~~---~d~~i~i~d~~~~---~~~~~-------~~~--~~~~v~~~~~~~s~~~~~l 243 (327)
.|.+....+.... . ..++.+. ..+.+++.++... .+... +.. ...-..++.. ++.-..+
T Consensus 196 gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~v--s~k~g~i 273 (1630)
T 1xi4_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI--SEKHDVV 273 (1630)
T ss_pred HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEe--ccccCEE
Confidence 1222221221110 0 1222111 2367888887432 11110 111 1112233444 3666777
Q ss_pred EEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482 244 CTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 244 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~ 300 (327)
..-+.-|.|.+||+.++.++..-+-...+|...+.+. .-++.....|.|.--.++..
T Consensus 274 y~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 274 FLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred EEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccc
Confidence 7888889999999999998876665555665555443 44555556776666555554
No 343
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=96.85 E-value=0.11 Score=40.60 Aligned_cols=238 Identities=9% Similarity=0.034 Sum_probs=125.5
Q ss_pred ccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482 15 ASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (327)
Q Consensus 15 ~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 93 (327)
..|..++. ....++. . ||.|..|-....-.+..-......|..++...+ ..++. . ||.|..|-....-.+.. +
T Consensus 24 ~~i~~ia~G~~h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg~-P 97 (282)
T 3qhy_B 24 SGVDAIAGGYFHGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTTV-P 97 (282)
T ss_dssp SSCCEEEECSSEEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCC-C
T ss_pred CCCcEEEeCCCeEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCCC-C
Confidence 35778888 4444444 4 899999975543222111112335666766533 23333 4 89999997653211111 0
Q ss_pred ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEe
Q psy7482 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSV 173 (327)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 173 (327)
..-... |..++...+ ..+.-. ||.|..|-....-.+.. +.. ....+..++...+..++ .. +|.++.|-.
T Consensus 98 ~~~~~~-v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~-~~~----~~~~i~~i~~G~~~~~~-l~-~G~v~~wG~ 166 (282)
T 3qhy_B 98 AEARSG-VDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTV-PAE----AQSGVTALDGGVYTALA-VK-NGGVIAWGD 166 (282)
T ss_dssp GGGSSS-EEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSC-CGG----GGSSEEEEEECSSEEEE-EE-TTEEEEEEC
T ss_pred cccCCC-eEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCC-Ccc----CCCCeEEEEcccCEEEE-EE-CCEEEEecC
Confidence 111223 777766543 333344 89999997654222111 111 11237677665444333 33 788888865
Q ss_pred cCCceee-EecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeE
Q psy7482 174 EKAGVLQ-TLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAI 252 (327)
Q Consensus 174 ~~~~~~~-~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i 252 (327)
.....+. .......|..++...+..++. .+|.++.|=......+-.-......|..++. .....++.. ||.+
T Consensus 167 n~~gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~---G~~h~~al~--~g~v 239 (282)
T 3qhy_B 167 NYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIAS---GEWYSLALK--NGKV 239 (282)
T ss_dssp CTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEE---CSSCEEEEE--TTEE
T ss_pred CCCCCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEc---CCCEEEEEE--CCEE
Confidence 4422211 111345677777766655555 5999999976543222111112235677765 334444444 8999
Q ss_pred EEEEcCCCceeEEeecccCceEEEeeeC
Q psy7482 253 TAYNLTDGSHLWHIKASASRIKGLASHR 280 (327)
Q Consensus 253 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 280 (327)
+.|-.....++.. ...|.+++...
T Consensus 240 ~~wG~n~~gq~~v----~~~v~~iaaG~ 263 (282)
T 3qhy_B 240 IAWGSSRTAPSSV----QSGVSSIEAGP 263 (282)
T ss_dssp EEESTTCCCCGGG----SSCEEEEEECS
T ss_pred EEecCCCCccccC----CCCcEEEEECc
Confidence 9997554333221 22566666555
No 344
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=96.83 E-value=0.12 Score=40.52 Aligned_cols=222 Identities=10% Similarity=0.057 Sum_probs=119.2
Q ss_pred cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeee
Q psy7482 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (327)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 135 (327)
.|..++.-.. ..++. . ||.|..|-....-.+. ++...... |..++...+. .++. . ||.|..|-....-.+..
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg-~p~~~~~~-i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLT-MPAATQSG-VDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTS-CCGGGGSC-CCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCC
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCC-CCccCCCC-EEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCC
Confidence 5667766432 23333 4 8999999765422111 11112223 7777665332 3333 4 89999997654222111
Q ss_pred eeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCC-ceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcC
Q psy7482 136 TNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKA-GVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLT 214 (327)
Q Consensus 136 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~ 214 (327)
+... ...|..++...+.. ++.. +|.++.|-.... +.-........|..++...+..++.. ||.++.|-..
T Consensus 97 -P~~~----~~~v~~ia~G~~hs-~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~--~G~v~~wG~n 167 (282)
T 3qhy_B 97 -PAEA----RSGVDAIAAGAWAS-YALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK--NGGVIAWGDN 167 (282)
T ss_dssp -CGGG----SSSEEEEEEETTEE-EEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE--TTEEEEEECC
T ss_pred -Cccc----CCCeEEEECcCCEE-EEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE--CCEEEEecCC
Confidence 0100 12377777765544 4444 899999965442 22111123456777776555444433 6999999765
Q ss_pred CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEecCCcEEE
Q psy7482 215 DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVV 294 (327)
Q Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~i 294 (327)
....+..-..-...|..++. -....++. .||.++.|-......+..-......|..++......+.-. ||.|+.
T Consensus 168 ~~gqlg~p~~~~~~v~~i~~---G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~-~g~v~~ 241 (282)
T 3qhy_B 168 YFGQTTVPAEAQSGVDDVAG---GIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK-NGKVIA 241 (282)
T ss_dssp TTSTTSCCGGGGSSEEEEEE---CSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE-TTEEEE
T ss_pred CCCCCCCceecCCCeEEEEe---cCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE-CCEEEE
Confidence 43222111112345777776 44445555 5999999975543222111111235777776663333344 999999
Q ss_pred EEccCc
Q psy7482 295 WELNED 300 (327)
Q Consensus 295 w~~~~~ 300 (327)
|-.+..
T Consensus 242 wG~n~~ 247 (282)
T 3qhy_B 242 WGSSRT 247 (282)
T ss_dssp ESTTCC
T ss_pred ecCCCC
Confidence 987665
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.41 E-value=0.39 Score=41.19 Aligned_cols=216 Identities=10% Similarity=0.087 Sum_probs=125.6
Q ss_pred CCCEEEEec-CCCeEEEEEcccccccccccc-ccccEEEEEEC--CCCCeEEEecC-------CCcE---------EE--
Q psy7482 23 TSKLAASSG-ADETVVLYDMVKRKQSGALMQ-HEGTITCLKFT--PEGSHLISCSD-------DGSI---------AI-- 80 (327)
Q Consensus 23 ~~~~l~~~~-~dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~-------d~~i---------~i-- 80 (327)
||++|+.-. .+..|-.-++...++-+.+.- ....+..++|- |+..|++.++. ||.. .+
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 778887766 456677778887766554442 34568888886 67778887764 2221 11
Q ss_pred -EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC---------------CEEEEEc-----------------
Q psy7482 81 -FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK---------------TLRTWNL----------------- 127 (327)
Q Consensus 81 -w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------------~i~iwd~----------------- 127 (327)
.|.++.+....+.. .+. .......+++++.++.+.+. .+.++++
T Consensus 221 ~iD~~tm~v~~Qv~v--~gn-ld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g 297 (638)
T 3sbq_A 221 AIDAETMEMAFQVIV--DGN-LDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGD 297 (638)
T ss_dssp EEETTTCSEEEEEEE--SSC-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTT
T ss_pred EEcCCccEEEEEEEc--CCC-hhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECC
Confidence 12222222222211 112 34455667777777776532 1444443
Q ss_pred --------CC----C-ceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCc------e-------e
Q psy7482 128 --------VK----G-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAG------V-------L 179 (327)
Q Consensus 128 --------~~----~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~------~-------~ 179 (327)
+. + .....++.+. ....+..+|||++++++. +.++.++|.+... . .
T Consensus 298 ~gv~ViD~~~~~~~~~~~~~~iP~pk------sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ 371 (638)
T 3sbq_A 298 SKTPVLDGRKKDGKDSKFTRYVPVPK------NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIV 371 (638)
T ss_dssp CCCCEEECSCBTTBCCSSEEEEEESS------SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEE
T ss_pred CCeeEEccccccccCCceEEEEeCCC------CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceE
Confidence 22 1 1111112222 256788999999998886 8899999987521 1 2
Q ss_pred eEecCCCceeEEEeecCce-EEEeCCCCcEEEEEcCCC----------ceeEEeeecccceEEEEE---EecCCCcEEEE
Q psy7482 180 QTLKSESKVHSVCFLNETT-VCTGNEESAITAYNLTDG----------SHLWQIKASASRIKGLVF---FSIPQETTVCT 245 (327)
Q Consensus 180 ~~~~~~~~i~~~~~~~~~~-l~~~~~d~~i~i~d~~~~----------~~~~~~~~~~~~v~~~~~---~~s~~~~~l~~ 245 (327)
...+..-.....+|.+++. ..+-.-|..|.-|++... ..+.++..|-.+-...+- ...++|++|++
T Consensus 372 ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ 451 (638)
T 3sbq_A 372 GEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVA 451 (638)
T ss_dssp ECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEE
T ss_pred eeccCCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEE
Confidence 2333455677889999854 445668999999998653 345555555443222110 00378888887
Q ss_pred ec
Q psy7482 246 GN 247 (327)
Q Consensus 246 ~~ 247 (327)
..
T Consensus 452 ln 453 (638)
T 3sbq_A 452 LS 453 (638)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.88 E-value=0.56 Score=42.04 Aligned_cols=157 Identities=11% Similarity=0.077 Sum_probs=84.3
Q ss_pred EEEe--CCCEEEEecCC------CeEEEEEccccccc--cccccccccEEEEEECCCCCeEEEecCCC--cEEEEEcCCC
Q psy7482 19 SVAA--TSKLAASSGAD------ETVVLYDMVKRKQS--GALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVGSW 86 (327)
Q Consensus 19 ~~~~--~~~~l~~~~~d------g~v~~w~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~ 86 (327)
++.. ++.+++.||.+ ..+.+||..+.+.. ..+...... .+++...+++.++.|+.++ .+.+||..+.
T Consensus 445 ~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 445 FTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp EEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred EEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence 4455 77777787754 35788888775432 222211111 2223323778888887755 6899999887
Q ss_pred eEEEeEEe--cc-cCCceeeEEEecC-CCEEEEEeC--C-----CCEEEEEcCCCc------eeeeeeccccCccccceE
Q psy7482 87 QLEKLFKK--AH-KGTAVNHISIHPS-GKLALSVGK--D-----KTLRTWNLVKGR------SAYITNLSSYGVGFENLD 149 (327)
Q Consensus 87 ~~~~~~~~--~~-~~~~v~~~~~~~~-~~~l~~~~~--d-----g~i~iwd~~~~~------~~~~~~~~~~~~~~~~v~ 149 (327)
+....-.. .. ......++.+..+ ++.++.|+. + ..+..||+.+.+ .......+... .. -.
T Consensus 524 ~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~--R~-~~ 600 (695)
T 2zwa_A 524 IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQ--RY-GS 600 (695)
T ss_dssp EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGC--CB-SC
T ss_pred ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCC--cc-cc
Confidence 65433210 01 1110223455554 667777765 2 358899998877 22222211110 01 11
Q ss_pred EEEEccCCcEEEeec-C--------CeEEEEEecCCcee
Q psy7482 150 SVVWSPEGLLYAIPI-Q--------NKAVVFSVEKAGVL 179 (327)
Q Consensus 150 ~~~~~~~~~~l~~~~-~--------~~i~i~d~~~~~~~ 179 (327)
++....++++++.|+ + ..+.+||..+.+-.
T Consensus 601 ~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 601 QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred eEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 233333366666664 2 35889998876543
No 347
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.79 E-value=0.74 Score=38.83 Aligned_cols=103 Identities=9% Similarity=0.115 Sum_probs=58.6
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEEEEcccccc--ccccc------cccccEEEEEECCC---CCeEEEecC-------
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ--SGALM------QHEGTITCLKFTPE---GSHLISCSD------- 74 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~--~~~~~------~~~~~v~~~~~~~~---~~~l~~~~~------- 74 (327)
...+.|+| +|+++++-...+.|++++..+++. +..+. ........|+|+|+ +..|..+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 35668998 788777655445788887654432 22221 12456789999995 455544332
Q ss_pred ------CCcEEEEEcCCC--eE--EEe----EEecccCCceeeEEEecCCCEEEEEeC
Q psy7482 75 ------DGSIAIFRVGSW--QL--EKL----FKKAHKGTAVNHISIHPSGKLALSVGK 118 (327)
Q Consensus 75 ------d~~i~iw~~~~~--~~--~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~ 118 (327)
...|.-++.... +. ... +....... ...|.|.|||.+.++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~-~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQ-SGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCC-EEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCC-CCeEeECCCCeEEEEECC
Confidence 124555554321 11 111 21111223 788999999987777553
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.68 E-value=0.9 Score=39.03 Aligned_cols=223 Identities=13% Similarity=0.127 Sum_probs=128.6
Q ss_pred EEEecCCCeEEEEEcccccccccccc-------------------------ccccE--EEEEECC---CCCeEEEecC-C
Q psy7482 27 AASSGADETVVLYDMVKRKQSGALMQ-------------------------HEGTI--TCLKFTP---EGSHLISCSD-D 75 (327)
Q Consensus 27 l~~~~~dg~v~~w~~~~~~~~~~~~~-------------------------~~~~v--~~~~~~~---~~~~l~~~~~-d 75 (327)
|.+|+..|.|+|+-+.+++.+..+.- ..+.. ..+.+.. ||++|+.-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 77999999999999988765543210 00111 1233332 5777877654 5
Q ss_pred CcEEEEEcCCCeEEEeEEecccCCceeeEEEe--cCCCEEEEEeC-------CCCEE---------E---EEcCCCceee
Q psy7482 76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIH--PSGKLALSVGK-------DKTLR---------T---WNLVKGRSAY 134 (327)
Q Consensus 76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~-------dg~i~---------i---wd~~~~~~~~ 134 (327)
..|...+++..+..+.+....... +..+.|- |+..+++.+++ ||... + .|..+.+...
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~-~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQA-IHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSC-EEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcC-cccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 678888999888888775455555 8999987 67888888875 33311 1 1222222222
Q ss_pred eeeccccCccccceEEEEEccCCcEEEeec-C---------------CeEEEEE-------------------------e
Q psy7482 135 ITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q---------------NKAVVFS-------------------------V 173 (327)
Q Consensus 135 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---------------~~i~i~d-------------------------~ 173 (327)
....... ...+...+++.+.++.+ + ..+.+++ .
T Consensus 232 Qv~v~gn------ld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~ 305 (638)
T 3sbq_A 232 QVIVDGN------LDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDG 305 (638)
T ss_dssp EEEESSC------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEEC
T ss_pred EEEcCCC------hhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcc
Confidence 2222211 22233344454443321 0 1234444 3
Q ss_pred cC----C-ceeeEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCc------e-------eEEeeecccceEEEE
Q psy7482 174 EK----A-GVLQTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGS------H-------LWQIKASASRIKGLV 233 (327)
Q Consensus 174 ~~----~-~~~~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~------~-------~~~~~~~~~~v~~~~ 233 (327)
+. + .....+........+..+|| .+ ++.|-.+.++.++|++... . ..+.+.. ......+
T Consensus 306 ~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G-lGPlHt~ 384 (638)
T 3sbq_A 306 RKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG-LGPLHTT 384 (638)
T ss_dssp SCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC-SCEEEEE
T ss_pred ccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC-CcccEEE
Confidence 32 1 12222233445667888999 44 4456678999999987421 1 2222322 2356677
Q ss_pred EEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482 234 FFSIPQETTVCTGNEESAITAYNLTD 259 (327)
Q Consensus 234 ~~~s~~~~~l~~~~~d~~i~i~d~~~ 259 (327)
| +++|....+---|..|.-|++..
T Consensus 385 F--d~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 385 F--DGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp E--CSSSEEEEEETTTTEEEEEEHHH
T ss_pred E--CCCCceEeeeeecceEEEEeccH
Confidence 8 48887777778899999999865
No 349
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.42 E-value=2.8 Score=34.43 Aligned_cols=290 Identities=10% Similarity=-0.008 Sum_probs=130.7
Q ss_pred CCEEEEecCCCeEEEEEccc-ccccccc--ccccccEEEEEECC-CCCeEEEecCCC----cEEEEEcCCCeEEEeEEec
Q psy7482 24 SKLAASSGADETVVLYDMVK-RKQSGAL--MQHEGTITCLKFTP-EGSHLISCSDDG----SIAIFRVGSWQLEKLFKKA 95 (327)
Q Consensus 24 ~~~l~~~~~dg~v~~w~~~~-~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~----~i~iw~~~~~~~~~~~~~~ 95 (327)
...|..|...| +.+++... ++.-..+ ......|.+|++.| +...|..++..| .|... ...++.-..+...
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~ 99 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRP 99 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCcc
Confidence 44677777777 55554332 2211111 11245699999998 334455555444 33332 2222221111010
Q ss_pred -----c-------cCCceeeEEEec-C-CCEEEEEeCCCCEEEEEcCCCceeeeee-cc--cc-----------Cccccc
Q psy7482 96 -----H-------KGTAVNHISIHP-S-GKLALSVGKDKTLRTWNLVKGRSAYITN-LS--SY-----------GVGFEN 147 (327)
Q Consensus 96 -----~-------~~~~v~~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~--~~-----------~~~~~~ 147 (327)
. ....|.++++.| + ...+..+...+.|...+- .++.-.... .. .. ......
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 0 001277888886 2 456666666665554432 222211111 10 00 001224
Q ss_pred eEEEEEccC--CcEEEeecCCeEEEEEecCCceeeEecC--------------CCceeEEEeecC--ceEEEeCCCCcEE
Q psy7482 148 LDSVVWSPE--GLLYAIPIQNKAVVFSVEKAGVLQTLKS--------------ESKVHSVCFLNE--TTVCTGNEESAIT 209 (327)
Q Consensus 148 v~~~~~~~~--~~~l~~~~~~~i~i~d~~~~~~~~~~~~--------------~~~i~~~~~~~~--~~l~~~~~d~~i~ 209 (327)
+.++.++|. +.+++...++.+...+ ..++....+.. ...+.++.+.|+ +.++++...+ |.
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~ 256 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IY 256 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EE
Confidence 788999883 3444444455554432 22332222211 124788999886 6777776554 43
Q ss_pred EEEcCCCceeEEeee--cc---cceEEEEEEecCCCcEEEEecC-----------CCeEEEEEcCCC-ceeEEee-cccC
Q psy7482 210 AYNLTDGSHLWQIKA--SA---SRIKGLVFFSIPQETTVCTGNE-----------ESAITAYNLTDG-SHLWHIK-ASAS 271 (327)
Q Consensus 210 i~d~~~~~~~~~~~~--~~---~~v~~~~~~~s~~~~~l~~~~~-----------d~~i~i~d~~~~-~~~~~~~-~~~~ 271 (327)
..+ ..++.-..+.. .. ..+..+++.+ .+...+.++.. ++...+|...++ +.-..+. +-..
T Consensus 257 ~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p-~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~ 334 (394)
T 3b7f_A 257 RMD-RREGVWKRIGDAMPREVGDIGFPIVVHQ-RDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPT 334 (394)
T ss_dssp EEE-TTTTEEECGGGGSCTTTCSCEEEEEECS-SCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCC
T ss_pred EeC-CCCCcceECCCCCCCCCccceEEEEECC-CCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCC
Confidence 333 22332222211 11 2345666642 13333444321 333456655543 3222221 1110
Q ss_pred -------ceEEEeeeC---cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482 272 -------RIKGLASHR---NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP 325 (327)
Q Consensus 272 -------~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~ 325 (327)
....++++| ..|+.++.++.|.. ..... +....+... -..+.+++|..+
T Consensus 335 ~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~--S~D~G-~tW~~~~~~--lp~~~~v~~~~~ 393 (394)
T 3b7f_A 335 DQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWA--SADEG-EHWQCIASH--LPHIYAVQSARP 393 (394)
T ss_dssp SSCCCCCCTBSEEECCSSSCCEEEECTTSCEEE--ESSTT-SBCEEEECS--CSCEEEEEEECC
T ss_pred ccccceEEEEEEEECCCCCCEEEEEeCCCeEEE--ECCCC-CCceEcccC--CCCeeEEEEecC
Confidence 013577766 45666766665543 22221 244444322 234778887653
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.85 E-value=8.3 Score=36.04 Aligned_cols=40 Identities=13% Similarity=0.162 Sum_probs=34.0
Q ss_pred eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccc
Q psy7482 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSS 140 (327)
Q Consensus 101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 140 (327)
+.++...++..++++-+.|+++++|++.+++++....+..
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~ 277 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ 277 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCC
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccc
Confidence 6677777788899999999999999999999887766543
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.81 E-value=5.3 Score=33.73 Aligned_cols=106 Identities=11% Similarity=0.158 Sum_probs=58.3
Q ss_pred cEEEEEECCCCC-eEEEecCCCcEEEEEcCCCe---EEEeEE----ec----ccCCceeeEEEecC---CCEEEEE-eC-
Q psy7482 56 TITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQ---LEKLFK----KA----HKGTAVNHISIHPS---GKLALSV-GK- 118 (327)
Q Consensus 56 ~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~---~~~~~~----~~----~~~~~v~~~~~~~~---~~~l~~~-~~- 118 (327)
....|+|.|++. .|+++...|.|++++..... .+..+. .+ .... ...|+++|+ ..+|+.. +.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~G-llgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERG-LLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCS-EEEEEECTTHHHHCEEEEEEEEC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCc-ceeeEeCCCCcCCCEEEEEEeCC
Confidence 457899999986 56666778999999754221 111110 10 1234 788999996 2333333 22
Q ss_pred -C----------CCEEEEEcCCC--------ceeeeeecc-ccCccccceEEEEEccCCcEEEeec
Q psy7482 119 -D----------KTLRTWNLVKG--------RSAYITNLS-SYGVGFENLDSVVWSPEGLLYAIPI 164 (327)
Q Consensus 119 -d----------g~i~iwd~~~~--------~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~ 164 (327)
+ ..|.-|.+..+ +....+... ....|. ...|.|.|||.++++..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGPDGFLYIILG 157 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECTTSCEEEEEC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECCCCcEEEEeC
Confidence 1 13444655421 111122222 122232 78999999998777654
No 352
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=91.35 E-value=4.7 Score=32.21 Aligned_cols=227 Identities=8% Similarity=0.063 Sum_probs=120.9
Q ss_pred CCEEEEecCCCeEEEEEcccccc---------ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc---C------C
Q psy7482 24 SKLAASSGADETVVLYDMVKRKQ---------SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV---G------S 85 (327)
Q Consensus 24 ~~~l~~~~~dg~v~~w~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~---~------~ 85 (327)
...+++-+.+|.|+--.+.+.+. -..++ ..+.+..+........|+.-+..|.++-... . .
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 34677888888888766443221 11222 2334444444444556666666777665543 2 1
Q ss_pred CeEEEeE-EecccCCceeeEEEec---CCCEEEEEeCCCCEEEEEcCCCce-----eeeeeccccCccccceEEEE-Ecc
Q psy7482 86 WQLEKLF-KKAHKGTAVNHISIHP---SGKLALSVGKDKTLRTWNLVKGRS-----AYITNLSSYGVGFENLDSVV-WSP 155 (327)
Q Consensus 86 ~~~~~~~-~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~v~~~~-~~~ 155 (327)
|..+..+ ....... |..+...+ +..+++.++.+|.++--.+..-.. ...+.+.. .+.+..+. .+.
T Consensus 82 G~~i~~~l~l~~~e~-i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke----~D~lv~~~~~~~ 156 (327)
T 3uc1_A 82 GQHVANLLAFQPEER-IAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD----NDELVGAVLCSA 156 (327)
T ss_dssp CEEHHHHTTCCTTCC-EEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT----TCCEEEEEEECT
T ss_pred CEEHHHccCCCCCCE-EEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC----CCEEEEEEEecC
Confidence 2222111 1112233 66554433 467899999999999988754222 11122222 12244443 344
Q ss_pred CCcEEEeecCCeEEEEEec--C---------CceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc------
Q psy7482 156 EGLLYAIPIQNKAVVFSVE--K---------AGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS------ 217 (327)
Q Consensus 156 ~~~~l~~~~~~~i~i~d~~--~---------~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~------ 217 (327)
+..+++....|.+..+... . |...-.+.....|.++...++ ..++..+..|.++.-.+..-.
T Consensus 157 ~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~ 236 (327)
T 3uc1_A 157 GDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGG 236 (327)
T ss_dssp TCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred CCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCC
Confidence 4556666668888888766 2 111222334556776665544 688889999999888764321
Q ss_pred -eeEEee--ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482 218 -HLWQIK--ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT 258 (327)
Q Consensus 218 -~~~~~~--~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~ 258 (327)
-+..++ ...+.+..+... .+...++..+.+|.+.-++..
T Consensus 237 ~G~~~~~l~~~~d~lv~~~~~--~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 237 KGVLTVMYDRRRGRLVGALIV--DDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CCEESSCCCTTTCSEEEEEEE--CTTCEEEEEEGGGCEEEEEGG
T ss_pred CcEEEEEecCCCCeEEEEEEe--CCCccEEEEcCCCeEEEEehh
Confidence 122222 112334444432 344455556666777666654
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.79 E-value=6.8 Score=33.08 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=56.8
Q ss_pred ccEEEEEe--CCC-EEEEecCCCeEEEEEccccc---cccccc---------cccccEEEEEECCC----CCeEEEecC-
Q psy7482 15 ASVRSVAA--TSK-LAASSGADETVVLYDMVKRK---QSGALM---------QHEGTITCLKFTPE----GSHLISCSD- 74 (327)
Q Consensus 15 ~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~---~~~~~~---------~~~~~v~~~~~~~~----~~~l~~~~~- 74 (327)
..-+.|+| ++. .|+++...|.|++++..... .+..+. ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 34568888 664 34555678999999753221 111111 11456889999996 433333221
Q ss_pred -C----------CcEEEEEcCC----------CeEEEeEEe-cccCCceeeEEEecCCCEEEEEeCC
Q psy7482 75 -D----------GSIAIFRVGS----------WQLEKLFKK-AHKGTAVNHISIHPSGKLALSVGKD 119 (327)
Q Consensus 75 -d----------~~i~iw~~~~----------~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d 119 (327)
+ ..|.-|.+.. .+.+..+.. ..... -..|.|.|||.+.++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~-g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL-GGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC-EEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc-CCcEeECCCCcEEEEeCCC
Confidence 1 1344455532 122323321 11222 6789999999877776653
No 354
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.28 E-value=5.6 Score=31.32 Aligned_cols=173 Identities=10% Similarity=0.068 Sum_probs=92.0
Q ss_pred EEEEeCCCEEEEecCC--------------CeEEEEEccccccccccccccccEEEEEECCCCCeEEEec--CC--CcEE
Q psy7482 18 RSVAATSKLAASSGAD--------------ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS--DD--GSIA 79 (327)
Q Consensus 18 ~~~~~~~~~l~~~~~d--------------g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d--~~i~ 79 (327)
..+..++++|+-.... ..|+..++...+.. .+.. .. +..|+++++.|+-.. .+ ..|.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDP--DP--CIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEEC--SC--EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-Eeec--CC--ccEEEEeCCEEEEEeecCCCCceEE
Confidence 3444477777655432 35777777655432 2321 11 225677888888665 33 4455
Q ss_pred EEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc
Q psy7482 80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL 158 (327)
Q Consensus 80 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (327)
..++...+ ...+ ..+. + ..++++++.|+-.+. ...|...++..+...... ... .. ..+.|++.
T Consensus 133 ~~~~dGs~-~~~l-t~~~---~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~--~~~------~~-~~~~P~g~ 196 (302)
T 3s25_A 133 RIRIDGEE-KKKI-KNHY---L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY--DCN------CY-KPVVLDDT 196 (302)
T ss_dssp EEETTSCC-CEEE-ESSC---C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE--CSC------EE-EEEEEETT
T ss_pred EEECCCCC-eEEE-eCCC---c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe--CCC------cc-ceeeecCC
Confidence 55655333 3334 2222 2 345677888876655 577888887765543332 211 21 23558888
Q ss_pred EEEeec--C-CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEe--CCCCcEEEEEcCC
Q psy7482 159 LYAIPI--Q-NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTG--NEESAITAYNLTD 215 (327)
Q Consensus 159 ~l~~~~--~-~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~--~~d~~i~i~d~~~ 215 (327)
.|+-.. + ..|..-++.... ...+. ...+.. ++|+ ++|.-+ ...+.|..-++.-
T Consensus 197 ~iy~t~~~~~~~I~~~~ldG~~-~~~Lt-~~~~~~--~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 197 NVYYMDVNRDNAIVHVNINNPN-PVVLT-EANIEH--YNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEEEEEGGGTTEEEEECSSSCC-CEECS-CSCEEE--EEEETTEEEEEECSSSCEEEEEETTS
T ss_pred EEEEEEcCCCcEEEEEECCCCC-eEEEe-CCCcce--EEECCCEEEEEECCCCcEEEEEECCC
Confidence 777654 2 366666666544 33332 233333 5565 444433 3345666666643
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.63 E-value=9.1 Score=35.76 Aligned_cols=38 Identities=11% Similarity=0.203 Sum_probs=30.9
Q ss_pred ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee
Q psy7482 228 RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK 267 (327)
Q Consensus 228 ~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 267 (327)
.+.+++.. ++..++++-+.|+++++|++.+++++.+..
T Consensus 237 ~~~~~~~~--~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFL--STYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEE--TTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeec--CCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 34555553 788899999999999999999999887654
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.89 E-value=10 Score=31.05 Aligned_cols=260 Identities=11% Similarity=-0.000 Sum_probs=118.5
Q ss_pred CccEEEEEeC---CCEEEEecCCC----eEEEEEccccc---cccc---ccc--------ccccEEEEEECCC--CCeEE
Q psy7482 14 TASVRSVAAT---SKLAASSGADE----TVVLYDMVKRK---QSGA---LMQ--------HEGTITCLKFTPE--GSHLI 70 (327)
Q Consensus 14 ~~~v~~~~~~---~~~l~~~~~dg----~v~~w~~~~~~---~~~~---~~~--------~~~~v~~~~~~~~--~~~l~ 70 (327)
...|.+|+++ ...|..++..| .|...+ ..++ .+.. +.. ....|.++++.|. ...|.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 3568999983 55566565554 343332 2222 1111 111 1135788999872 45666
Q ss_pred EecCCCcEEEEEcCCCeEEEeEEec-----------------ccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCce
Q psy7482 71 SCSDDGSIAIFRVGSWQLEKLFKKA-----------------HKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRS 132 (327)
Q Consensus 71 ~~~~d~~i~iw~~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~ 132 (327)
.++..+.|...+ ..++.-..+... .....+.+|.+.| +...++.+..++.|...+ ..++.
T Consensus 133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~t 210 (394)
T 3b7f_A 133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTD 210 (394)
T ss_dssp EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSS
T ss_pred EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCC
Confidence 666565554432 122221122000 0112378899987 344555555444444432 22322
Q ss_pred eeeeeccccCc--------cccceEEEEEccC-CcEEEeecCCeEEEEEecCCceeeEec--C-C---CceeEEEeecC-
Q psy7482 133 AYITNLSSYGV--------GFENLDSVVWSPE-GLLYAIPIQNKAVVFSVEKAGVLQTLK--S-E---SKVHSVCFLNE- 196 (327)
Q Consensus 133 ~~~~~~~~~~~--------~~~~v~~~~~~~~-~~~l~~~~~~~i~i~d~~~~~~~~~~~--~-~---~~i~~~~~~~~- 196 (327)
-.......... ....+.++.+.|+ ...+.++..+.|...+- .++....+. . . ..+..+.++|.
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~ 289 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRD 289 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSC
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCC-CCCcceECCCCCCCCCccceEEEEECCCC
Confidence 11111100000 0123888999986 34555566555555442 233333322 1 1 33567788763
Q ss_pred -ceEEEeCC-----------CCcEEEEEcCCC-ceeEEeee---ccc-----ceEEEEEEecCCCcEEEEecCCCeEEEE
Q psy7482 197 -TTVCTGNE-----------ESAITAYNLTDG-SHLWQIKA---SAS-----RIKGLVFFSIPQETTVCTGNEESAITAY 255 (327)
Q Consensus 197 -~~l~~~~~-----------d~~i~i~d~~~~-~~~~~~~~---~~~-----~v~~~~~~~s~~~~~l~~~~~d~~i~i~ 255 (327)
+.++++.. ++...+|...++ +.-..+.. ... ....+++.+ .+...|+.++.++.|..-
T Consensus 290 ~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p-~~~~~l~~g~~~g~l~~S 368 (394)
T 3b7f_A 290 PRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADA-HAPVGVYFGTTGGEIWAS 368 (394)
T ss_dssp TTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECC-SSSCCEEEECTTSCEEEE
T ss_pred CCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECC-CCCCEEEEEeCCCeEEEE
Confidence 55555431 333456665543 22222210 000 013466642 234556666656655443
Q ss_pred EcCCCceeEEeecccCceEEEeee
Q psy7482 256 NLTDGSHLWHIKASASRIKGLASH 279 (327)
Q Consensus 256 d~~~~~~~~~~~~~~~~v~~~~~~ 279 (327)
+ ..++.-..+..+-..+.+++|.
T Consensus 369 ~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 369 A-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp S-STTSBCEEEECSCSCEEEEEEE
T ss_pred C-CCCCCceEcccCCCCeeEEEEe
Confidence 2 3344333444444456777664
No 357
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=86.46 E-value=11 Score=30.06 Aligned_cols=156 Identities=9% Similarity=0.066 Sum_probs=89.2
Q ss_pred CccEEEEEe-----CCCEEEEecCCCeEEEEEcccccc-------ccccccccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482 14 TASVRSVAA-----TSKLAASSGADETVVLYDMVKRKQ-------SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF 81 (327)
Q Consensus 14 ~~~v~~~~~-----~~~~l~~~~~dg~v~~w~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 81 (327)
...|.++.. +..+++..+.+|.++--.+..... ...+.. .+.+..+........|+..+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 344555544 367899999999999988765322 223433 3445555444455678888889988888
Q ss_pred EcC--CCeE-------EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc-------eeeeeeccccCccc
Q psy7482 82 RVG--SWQL-------EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR-------SAYITNLSSYGVGF 145 (327)
Q Consensus 82 ~~~--~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~~ 145 (327)
... .-.. ...+....... |.++...+++..++..+..|.++.-.+..-. -...+.+... .
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~~~d~-Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~---~ 248 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFNIDDR-LLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRR---R 248 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCCTTCC-EEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTT---T
T ss_pred ECcccccCcCCcCCCCeeeecCCCCCE-EEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCC---C
Confidence 776 2111 11121122333 7777666666788999999999888764321 1222222211 1
Q ss_pred cceEEEE-EccCCcEEEeecCCeEEEEEec
Q psy7482 146 ENLDSVV-WSPEGLLYAIPIQNKAVVFSVE 174 (327)
Q Consensus 146 ~~v~~~~-~~~~~~~l~~~~~~~i~i~d~~ 174 (327)
+.+..+. ..++..+++...+|.+..++..
T Consensus 249 d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 249 GRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred CeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 1233333 3344455566667777666654
No 358
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=85.37 E-value=20 Score=32.15 Aligned_cols=229 Identities=13% Similarity=0.084 Sum_probs=114.4
Q ss_pred EEEeCCCEEEEe----cCC-CeEEEEEccccccccc-cc-cccc------cEEEEEECCCCCeEEEe----------cCC
Q psy7482 19 SVAATSKLAASS----GAD-ETVVLYDMVKRKQSGA-LM-QHEG------TITCLKFTPEGSHLISC----------SDD 75 (327)
Q Consensus 19 ~~~~~~~~l~~~----~~d-g~v~~w~~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~~----------~~d 75 (327)
|+..++++++.+ |+| ..++++|+.+++.+.. +. .-+. ....++|..++..+++. +..
T Consensus 136 ~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 136 NCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp ECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred ecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 344477776643 222 4699999999887642 22 0000 11334676333333321 122
Q ss_pred CcEEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCE-----EEEEeCC---CCEEEEEcCC--CceeeeeeccccCc
Q psy7482 76 GSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKL-----ALSVGKD---KTLRTWNLVK--GRSAYITNLSSYGV 143 (327)
Q Consensus 76 ~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~~d---g~i~iwd~~~--~~~~~~~~~~~~~~ 143 (327)
..|+.|.+.+.. -...+ ......--.....++++++ +++.+.+ ..+.+.+... ++. ..+..+..
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~-- 291 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLF-EVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINMPSD-- 291 (711)
T ss_dssp CEEEEEETTSCGGGCEEEE-ECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCSCTT--
T ss_pred CEEEEEECCCChHHCeEEe-ccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeecCCc--
Confidence 568888886643 22333 2222221233445556652 4443322 3456666543 321 12222221
Q ss_pred cccceEEEEEccCCcEEEee-----------cCCeEEEEEecCCc-------eeeE-ec--CCCceeEEEeecCceEEEe
Q psy7482 144 GFENLDSVVWSPEGLLYAIP-----------IQNKAVVFSVEKAG-------VLQT-LK--SESKVHSVCFLNETTVCTG 202 (327)
Q Consensus 144 ~~~~v~~~~~~~~~~~l~~~-----------~~~~i~i~d~~~~~-------~~~~-~~--~~~~i~~~~~~~~~~l~~~ 202 (327)
. .+....++.+++.. ..+.|...|+.++. .... +. ....+..+.+..+.++++.
T Consensus 292 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 366 (711)
T 4hvt_A 292 ----A-TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLAT 366 (711)
T ss_dssp ----C-EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEE
T ss_pred ----c-eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEE
Confidence 1 12334456555532 25678889887642 1222 43 3456778888888777777
Q ss_pred CCCCc--EEEEEcCCCc-eeEE-eeec-ccceEEEEEEecCCCc-EEEEec---CCCeEEEEEcC
Q psy7482 203 NEESA--ITAYNLTDGS-HLWQ-IKAS-ASRIKGLVFFSIPQET-TVCTGN---EESAITAYNLT 258 (327)
Q Consensus 203 ~~d~~--i~i~d~~~~~-~~~~-~~~~-~~~v~~~~~~~s~~~~-~l~~~~---~d~~i~i~d~~ 258 (327)
..++. +.++|+.+++ .... +... .+.+..... ++++. ++++.+ .-+.+..+|+.
T Consensus 367 ~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~--~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 367 YDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSS--YEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EETTEEEEEEECEETTEECCCEEECCCSTTCEEEEEC--CTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEee--cCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 77764 5667766554 2222 2221 233444443 24544 444433 23678888876
No 359
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=84.89 E-value=13 Score=29.31 Aligned_cols=207 Identities=9% Similarity=0.023 Sum_probs=103.7
Q ss_pred CCCCeEEEec--CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC--------------CCEEEEEc
Q psy7482 64 PEGSHLISCS--DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD--------------KTLRTWNL 127 (327)
Q Consensus 64 ~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~iwd~ 127 (327)
+++..|+... .++.|...+.+... ...+ .... + --+++++.+|+-+... ..|+..++
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l-~~~~---~--~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKL-SNDT---A--MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEE-EEEE---E--EEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEc-cCCc---e--eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 3456555443 34556666654433 3333 1111 2 3457888888877643 35677777
Q ss_pred CCCceeeeeeccccCccccceEEEEEccCCcEEEeec-----CCeEEEEEecCCceeeEecCCCceeEEEeecC--ceEE
Q psy7482 128 VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-----QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE--TTVC 200 (327)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~--~~l~ 200 (327)
..++...... -....|+++++.++... ...|+..++..........+.. ..++++ .+..
T Consensus 96 dg~~~~~l~~----------~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~ 161 (302)
T 3s25_A 96 NGHGSTVLDP----------DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYY 161 (302)
T ss_dssp TSCCCEEEEC----------SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEE
T ss_pred CCCcceEeec----------CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEE
Confidence 6554322211 11236777887776553 3456666665433333333322 334555 4444
Q ss_pred EeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC--CeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482 201 TGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE--SAITAYNLTDGSHLWHIKASASRIKGLAS 278 (327)
Q Consensus 201 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 278 (327)
+......|...++..+.....+. +... ..+. |++++|+-...+ ..|..-++.... ...+.. ..+..++.
T Consensus 162 t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~--P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~~~~~~ 232 (302)
T 3s25_A 162 NNPKNGQLYRYDTASQSEALFYD---CNCY-KPVV--LDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANIEHYNV 232 (302)
T ss_dssp ECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEE--EETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCEEEEEE
T ss_pred EeCCCceEEEEECCCCCEEEEeC---CCcc-ceee--ecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCcceEEE
Confidence 55557788888887665433332 2222 2343 777777654433 356666765544 223321 23333333
Q ss_pred eCcEEEEEec--CCcEEEEEccCc
Q psy7482 279 HRNHLICITS--AGDLVVWELNED 300 (327)
Q Consensus 279 ~~~~l~~~~~--dg~v~iw~~~~~ 300 (327)
...+|.-++. .+.|..-+++..
T Consensus 233 ~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 233 YGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp ETTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCEEEEEECCCCcEEEEEECCCC
Confidence 3355554432 233444444443
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=84.34 E-value=4.7 Score=35.18 Aligned_cols=60 Identities=18% Similarity=0.185 Sum_probs=43.7
Q ss_pred EEEEEECCCCCeEEEecCC------------CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEe
Q psy7482 57 ITCLKFTPEGSHLISCSDD------------GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG 117 (327)
Q Consensus 57 v~~~~~~~~~~~l~~~~~d------------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 117 (327)
.-.|+|+|.|++++.-..+ ..+.+.+..+++..+.+ ....+.+++.++|+||++.|++.-
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~-~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM-VGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEE-ECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEE-eCCCCccCcCeeECCCCCEEEEEE
Confidence 4568999999866654322 23556666777776666 677777799999999998887653
No 361
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=82.96 E-value=19 Score=29.82 Aligned_cols=268 Identities=13% Similarity=0.074 Sum_probs=134.0
Q ss_pred EEEEeCCCEEEEecCCCeEEEEEcccc-cc-----------ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482 18 RSVAATSKLAASSGADETVVLYDMVKR-KQ-----------SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (327)
Q Consensus 18 ~~~~~~~~~l~~~~~dg~v~~w~~~~~-~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~ 85 (327)
..++.....-+.-..||.|..|-.... ++ ...+. .-..|..++.- +...+.-..||.|+.|-...
T Consensus 27 ~~ia~g~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~-~l~~v~~va~G--~~h~~~l~~~G~v~~wG~n~ 103 (423)
T 3mvd_K 27 ARIAFHLELPKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVA-GIPDAVDISAG--GMHNLVLTKSGDIYSFGCND 103 (423)
T ss_dssp --CCCCCCCCCCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEECC-SCSSEEEEEEC--SSEEEEEETTSCEEEEECCS
T ss_pred eEEecCCccceeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeEcc-CCCCceEEeeC--CCeEEEEeCCCeEEEeECCC
Confidence 334443333344456888888853321 10 01111 11235555543 44556667789999996532
Q ss_pred -CeE-----------EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEc--C-CCcee------eeeeccccCcc
Q psy7482 86 -WQL-----------EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL--V-KGRSA------YITNLSSYGVG 144 (327)
Q Consensus 86 -~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~--~-~~~~~------~~~~~~~~~~~ 144 (327)
+++ .... ...... |..++.. ....+.-..||.|..|-. . .++.- ...+.... .
T Consensus 104 ~GqLG~~~~~~~~~~~P~~-v~~~~~-i~~va~G--~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~--~ 177 (423)
T 3mvd_K 104 EGALGRDTSEDGSESKPDL-IDLPGK-ALCISAG--DSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLM--E 177 (423)
T ss_dssp SSTTCSCCCSTTSSSSCEE-CCCSSC-EEEEEEC--SSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESS--T
T ss_pred CcCCCCCCcCCccccCCeE-EcCCCC-EEEEEcC--cCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEec--C
Confidence 110 0000 111122 5555543 345555678899999975 2 22210 00111100 1
Q ss_pred ccceEEEEEccCCcEEEeecCCeEEEEEecCCc----------------------eeeEec--CCCceeEEEeecCceEE
Q psy7482 145 FENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG----------------------VLQTLK--SESKVHSVCFLNETTVC 200 (327)
Q Consensus 145 ~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~----------------------~~~~~~--~~~~i~~~~~~~~~~l~ 200 (327)
...|..++... ...++...+|.|+.|-..... ....+. ....|..++......++
T Consensus 178 ~~~i~~va~G~-~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~ 256 (423)
T 3mvd_K 178 GTVCCSIASGA-DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFM 256 (423)
T ss_dssp TCCEEEEEECS-SEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEecCC-CeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCcEEEE
Confidence 12366666543 234455568888888543211 011111 23456666655444444
Q ss_pred EeCCCCcEEEEEcCCCc-----------eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC---------
Q psy7482 201 TGNEESAITAYNLTDGS-----------HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG--------- 260 (327)
Q Consensus 201 ~~~~d~~i~i~d~~~~~-----------~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~--------- 260 (327)
.-..++.++.|-..... ...........|..++. ...+.+.-..||.|+.|-....
T Consensus 257 ~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~----G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~ 332 (423)
T 3mvd_K 257 RESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAG----GQHHTVILTTDLKCSVVGRPEYGRLGLGDVK 332 (423)
T ss_dssp EETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEE----CSSEEEEEETTCCEEEEECCGGGTTCSSSCC
T ss_pred EECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEc----ccCeEEEEeCCCcEEEEECCCCCCCCCCCcc
Confidence 44788999999654311 11111111335666664 3344455567899999964321
Q ss_pred ---ceeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEccC
Q psy7482 261 ---SHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNE 299 (327)
Q Consensus 261 ---~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~ 299 (327)
.....+......|..++......+....||.|+.|=...
T Consensus 333 ~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~ 374 (423)
T 3mvd_K 333 DVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGV 374 (423)
T ss_dssp SCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCEEEEECCT
T ss_pred ccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCEEEECCCC
Confidence 112222222336777777775555568899999997655
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=80.02 E-value=11 Score=36.11 Aligned_cols=40 Identities=13% Similarity=0.162 Sum_probs=33.5
Q ss_pred eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccc
Q psy7482 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSS 140 (327)
Q Consensus 101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 140 (327)
+.+++..++..++++-+.|+++++|++.+++++....+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~~ 279 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ 279 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECCC
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechhh
Confidence 5566677788899999999999999999999888766544
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=79.66 E-value=2.4 Score=37.75 Aligned_cols=37 Identities=3% Similarity=-0.026 Sum_probs=31.5
Q ss_pred ccEEEEEeCCCEEEEecCCCeEEEEEccccccccccc
Q psy7482 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALM 51 (327)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~ 51 (327)
..|.++.++..++++-+.|.++|+|++.+++++.+..
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4577778888999999999999999999998766544
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=78.21 E-value=15 Score=31.82 Aligned_cols=63 Identities=16% Similarity=0.181 Sum_probs=43.6
Q ss_pred ccEEEEEECCCCCeEEEecC------------CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC
Q psy7482 55 GTITCLKFTPEGSHLISCSD------------DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK 118 (327)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~------------d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 118 (327)
.....|.|.++|.+.+.... ...+..++..+++....+ .......++.++|+||++.|+++-+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl-~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM-VGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE-ECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE-eCCCCccccCCEECCCCCEEEEEEe
Confidence 35678999999987763221 125666677777766655 4444445999999999998887643
No 365
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=74.87 E-value=29 Score=27.32 Aligned_cols=185 Identities=13% Similarity=0.063 Sum_probs=97.3
Q ss_pred CCEEEEecCCCeEEEEEcccccccc---------ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC---------C
Q psy7482 24 SKLAASSGADETVVLYDMVKRKQSG---------ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG---------S 85 (327)
Q Consensus 24 ~~~l~~~~~dg~v~~w~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~---------~ 85 (327)
...+++.+.+|.|+--.+.+.+... .++.. +.+..+........|+..+..|.++-.... .
T Consensus 3 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~ 81 (307)
T 1zi0_A 3 EDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR 81 (307)
T ss_dssp CEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred CcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence 4567888899999877654422111 12222 233333333344566667777776665542 1
Q ss_pred CeEEEe-EEecccCCceeeEEEe---cCCCEEEEEeCCCCEEEEEcCCCce-----eeeeeccccCccccceEEEEE-cc
Q psy7482 86 WQLEKL-FKKAHKGTAVNHISIH---PSGKLALSVGKDKTLRTWNLVKGRS-----AYITNLSSYGVGFENLDSVVW-SP 155 (327)
Q Consensus 86 ~~~~~~-~~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~v~~~~~-~~ 155 (327)
|..+.. +....... |..+... +++.+++..+..|.++-..+..-.. ...+.+... +.+..+.. ..
T Consensus 82 G~~i~~~l~l~~~e~-i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~----d~lv~~~~~~~ 156 (307)
T 1zi0_A 82 GRPIVNLLPLEQDER-ITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG----DELIGVDLTSG 156 (307)
T ss_dssp CEEGGGTSCCCTTCC-EEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT----CCEEEEEEECT
T ss_pred CeEhhhccCCCCCCE-EEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC----CEEEEEEEeCC
Confidence 222211 11122223 6655432 2456788899999999987753211 111222211 23444433 44
Q ss_pred CCcEEEeecCCeEEEEEecCCc---------eeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcC
Q psy7482 156 EGLLYAIPIQNKAVVFSVEKAG---------VLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLT 214 (327)
Q Consensus 156 ~~~~l~~~~~~~i~i~d~~~~~---------~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~ 214 (327)
+..+++...+|.+..++...-. ..-.+.....|.++...++ ..+++.+..|.++-.++.
T Consensus 157 ~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 157 EDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred CCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 4556666668888887764311 1122334556766655444 667888888888877763
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.43 E-value=14 Score=35.33 Aligned_cols=30 Identities=7% Similarity=0.068 Sum_probs=27.0
Q ss_pred CCCcEEEEecCCCeEEEEEcCCCceeEEee
Q psy7482 238 PQETTVCTGNEESAITAYNLTDGSHLWHIK 267 (327)
Q Consensus 238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 267 (327)
++..++++-+.|+++++|++.+++++.+..
T Consensus 247 ~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 247 STYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred CCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 788999999999999999999999887654
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=71.34 E-value=41 Score=27.50 Aligned_cols=139 Identities=9% Similarity=0.139 Sum_probs=78.5
Q ss_pred eEEEEEcccc--cccccccc------ccccEEEEEEC---CC----CCeEEEe-cCCCcEEEEEcCCCeEEEeEEe---c
Q psy7482 35 TVVLYDMVKR--KQSGALMQ------HEGTITCLKFT---PE----GSHLISC-SDDGSIAIFRVGSWQLEKLFKK---A 95 (327)
Q Consensus 35 ~v~~w~~~~~--~~~~~~~~------~~~~v~~~~~~---~~----~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~---~ 95 (327)
+|.+||+.+. +.++.+.- ....+..+++. |+ +.+...+ .....|.++|+.+++..+.+.. .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6889999999 87766542 23457888877 22 2333333 3467899999998876654410 0
Q ss_pred c--------------cCCceeeEEEecC----CCEEEEEeCCCCEEEEEcCC-----CceeeeeeccccCccccceEEEE
Q psy7482 96 H--------------KGTAVNHISIHPS----GKLALSVGKDKTLRTWNLVK-----GRSAYITNLSSYGVGFENLDSVV 152 (327)
Q Consensus 96 ~--------------~~~~v~~~~~~~~----~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~v~~~~ 152 (327)
. ... +..++.+|+ ++.|+-....+ -++|.+.+ ......+...........-..++
T Consensus 204 d~~~~~~i~G~~~~~~~G-i~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAG-IFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp CSCEEEEETTEEEEECCC-EEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred ccCcceEECCEEeEeccC-ceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 0 123 778888887 66776665543 34444332 21111111111110011234566
Q ss_pred Ec-cCCcEEEeec-CCeEEEEEecC
Q psy7482 153 WS-PEGLLYAIPI-QNKAVVFSVEK 175 (327)
Q Consensus 153 ~~-~~~~~l~~~~-~~~i~i~d~~~ 175 (327)
.. .+|.++.+-. .+.|..|+..+
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCC
Confidence 75 5666555554 78999999875
No 368
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=70.50 E-value=42 Score=27.30 Aligned_cols=186 Identities=12% Similarity=0.051 Sum_probs=102.3
Q ss_pred CCCEEEEecCCCeEEEEEcccccc---------ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC---------
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQ---------SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG--------- 84 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--------- 84 (327)
+..++++.+.+|.|+--.+...+. -..++ ..+.+..+........|+..+..|.++-+...
T Consensus 6 ~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a 84 (370)
T 3l6v_A 6 PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNA 84 (370)
T ss_dssp CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCccc
Confidence 667889999999999876543221 11222 23445555555555666667777877666542
Q ss_pred CCeEEEe-EEecccCCceeeEEEec---CCCEEEEEeCCCCEEEEEcCCCc-----eeeeeeccccCccccceEEEEE-c
Q psy7482 85 SWQLEKL-FKKAHKGTAVNHISIHP---SGKLALSVGKDKTLRTWNLVKGR-----SAYITNLSSYGVGFENLDSVVW-S 154 (327)
Q Consensus 85 ~~~~~~~-~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~v~~~~~-~ 154 (327)
.|..+.. +....... |.++...+ ++.+|+.++..|.++...+..-. -...+.+.. .+.+..+.. .
T Consensus 85 ~G~~i~~ll~L~~~e~-Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~----~d~lv~v~~~~ 159 (370)
T 3l6v_A 85 RGRPIINWIPLESGER-VQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE----GDALVGVALTD 159 (370)
T ss_dssp CCEEGGGSCCCCTTCC-EEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT----TCCEEEEEEEC
T ss_pred CCcCHhhccCCCCCCE-EEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC----CCEEEEEEEeC
Confidence 1222211 11122233 66554432 35689999999999998865322 122222221 122444433 4
Q ss_pred cCCcEEEeecCCeEEEEEecCCc---------eeeEecCCCceeEEEeec------------------------------
Q psy7482 155 PEGLLYAIPIQNKAVVFSVEKAG---------VLQTLKSESKVHSVCFLN------------------------------ 195 (327)
Q Consensus 155 ~~~~~l~~~~~~~i~i~d~~~~~---------~~~~~~~~~~i~~~~~~~------------------------------ 195 (327)
.+..+++...+|.+..++...-. ..-.+.....|.++...+
T Consensus 160 ~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~ 239 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVID 239 (370)
T ss_dssp SCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC----------------------------
T ss_pred CCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccc
Confidence 44456666668888777754311 111223345555555443
Q ss_pred -----C-ceEEEeCCCCcEEEEEcC
Q psy7482 196 -----E-TTVCTGNEESAITAYNLT 214 (327)
Q Consensus 196 -----~-~~l~~~~~d~~i~i~d~~ 214 (327)
+ ..+++.+..|..+...+.
T Consensus 240 ~~~~~~~~~il~vTe~G~gKrt~~~ 264 (370)
T 3l6v_A 240 VADNGDVAYILTATENGYGKRTPLA 264 (370)
T ss_dssp -------CEEEEEETTSEEEEEEGG
T ss_pred cccccCCceEEEeeCCCCEEEEEHH
Confidence 2 467888888888887764
No 369
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=68.97 E-value=42 Score=26.67 Aligned_cols=187 Identities=12% Similarity=0.062 Sum_probs=102.9
Q ss_pred CCCEEEEecCCCeEEEEEcccccc----ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC---------CCeEE
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQ----SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG---------SWQLE 89 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~---------~~~~~ 89 (327)
+...+++.+.+|.|+--.+...+. -..++.. +.+..+........|+..+..|.+.-.... .|.++
T Consensus 4 ~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i 82 (323)
T 1wp5_A 4 SEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI 82 (323)
T ss_dssp CCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred CCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence 456788889999998876543221 1123333 334444444445567777778877666542 12221
Q ss_pred Ee-EEecccCCceeeEEEecC---CCEEEEEeCCCCEEEEEcCCCc------eeeeeeccccCccccceEEEEE-ccCCc
Q psy7482 90 KL-FKKAHKGTAVNHISIHPS---GKLALSVGKDKTLRTWNLVKGR------SAYITNLSSYGVGFENLDSVVW-SPEGL 158 (327)
Q Consensus 90 ~~-~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~v~~~~~-~~~~~ 158 (327)
.. +....... |..+...++ +.+++.++.+|.++-..+..-. -...+.+... +.+..+.. .++..
T Consensus 83 ~~~i~L~~~e~-Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~----d~lv~~~~~~~~~~ 157 (323)
T 1wp5_A 83 ANIIPIDRDEE-IIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND----DQVVDVHLTDGMNE 157 (323)
T ss_dssp GGTSCCCTTCC-EEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT----CCEEEEEEECSCSE
T ss_pred hhccCCCCCCE-EEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC----CEEEEEEEeCCCCE
Confidence 11 11112223 655433332 5678899999999998875321 1222222221 23444443 34455
Q ss_pred EEEeecCCeEEEEEecCCc---------eeeEecCCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCC
Q psy7482 159 LYAIPIQNKAVVFSVEKAG---------VLQTLKSESKVHSVCFLNE-T-TVCTGNEESAITAYNLTD 215 (327)
Q Consensus 159 ~l~~~~~~~i~i~d~~~~~---------~~~~~~~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~ 215 (327)
+++.+.+|.+..+....-. ....+.....|.++...++ . .+++.+..|..+..++..
T Consensus 158 i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 158 LFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 6666668888888764311 1112234456666655443 4 688888888888777643
No 370
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=67.45 E-value=44 Score=26.35 Aligned_cols=228 Identities=11% Similarity=0.094 Sum_probs=121.9
Q ss_pred CCCCeEEEecCCCcEEEEEcCCCeEE-------EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCcee---
Q psy7482 64 PEGSHLISCSDDGSIAIFRVGSWQLE-------KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA--- 133 (327)
Q Consensus 64 ~~~~~l~~~~~d~~i~iw~~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--- 133 (327)
++..++++.+.+|.|+--.+...+.. ..+.....+. +..+........++..+..|.++-+....-...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~-l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDE-IVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCC-EEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCE-EEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 56678889999999998876543211 1111122233 555555555667777888898777765321100
Q ss_pred -------eeeeccccCccccceEEEEEc----cCCcEEEeecCCeEEEEEecCC-------ceeeEecCCCceeEEEeec
Q psy7482 134 -------YITNLSSYGVGFENLDSVVWS----PEGLLYAIPIQNKAVVFSVEKA-------GVLQTLKSESKVHSVCFLN 195 (327)
Q Consensus 134 -------~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~~~i~i~d~~~~-------~~~~~~~~~~~i~~~~~~~ 195 (327)
..+.+.. .+.+..+... ++..++.+...|.++...+... .....+.....+..+....
T Consensus 85 ~~G~~i~~~l~l~~----~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~ 160 (312)
T 1suu_A 85 SKGQNISELINLGD----QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVF 160 (312)
T ss_dssp ---CBGGGTSCCCT----TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEEC
T ss_pred CCCcChhhccCCCC----CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeC
Confidence 0111111 1224444332 2334555555898888776432 2222333455666665544
Q ss_pred -CceEEEeCCCCcEEEEEcCCCc---------eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc----
Q psy7482 196 -ETTVCTGNEESAITAYNLTDGS---------HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS---- 261 (327)
Q Consensus 196 -~~~l~~~~~d~~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~---- 261 (327)
+..++..+.+|.+..++...-. ....+.. ...+..+... .++..+++.+..|..+..++..-.
T Consensus 161 ~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v--~~~~~l~~vt~~G~~kr~~~~e~~~~~R 237 (312)
T 1suu_A 161 KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSV--KENPYLLIVSENGYGKRLNMSKISELKR 237 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEEC--TTCSEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEE--CCCCeEEEEECCCceEEEEHHHhcccCC
Confidence 4778888999999888875411 1122222 3345555543 456667788888999888875421
Q ss_pred ---eeEEee---cccCceEEE-eeeC-cEEEEEecCCcEEEEEccC
Q psy7482 262 ---HLWHIK---ASASRIKGL-ASHR-NHLICITSAGDLVVWELNE 299 (327)
Q Consensus 262 ---~~~~~~---~~~~~v~~~-~~~~-~~l~~~~~dg~v~iw~~~~ 299 (327)
-+..+. ...+.+.++ .+.+ ..+...+..|.+.-.....
T Consensus 238 ~~kGv~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r~~~~~ 283 (312)
T 1suu_A 238 GATGYTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVAGK 283 (312)
T ss_dssp TCCCEECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEEEGGG
T ss_pred CCCCEEeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEEEEccc
Confidence 111121 222334333 3444 5566666677554444433
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=65.19 E-value=45 Score=25.71 Aligned_cols=193 Identities=11% Similarity=0.061 Sum_probs=102.3
Q ss_pred ccEEEEEECCCCCeEEEecCCCcEEEE---EcCCCeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcCC
Q psy7482 55 GTITCLKFTPEGSHLISCSDDGSIAIF---RVGSWQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVK 129 (327)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw---~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~ 129 (327)
+.+..+.-......|+.-+.+|.++-- ++....... + ...... |..+.. + +..+++..+.+|.++-..+..
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~~~e~-i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-KSREEK-IVGAFI-REKFGNRLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C-SSTTCC-EEEEEE-GGGSCSEEEEEETTSEEEEEEGGG
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c-CCCCCE-EEEEEC-CcCCCCEEEEEeCCCEEEEEEHHH
Confidence 345555444444566666777766543 333222111 2 222333 666644 4 467899999999999998755
Q ss_pred Cc----eeeeeeccccCccccceEEEEEccC-CcEEEeecCCeEEEEEecC---------CceeeEecCCCceeEEEeec
Q psy7482 130 GR----SAYITNLSSYGVGFENLDSVVWSPE-GLLYAIPIQNKAVVFSVEK---------AGVLQTLKSESKVHSVCFLN 195 (327)
Q Consensus 130 ~~----~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~i~i~d~~~---------~~~~~~~~~~~~i~~~~~~~ 195 (327)
-. -...+.+.. .+.+..+..... ..+++....|.+..+.... |...-.+.....+..+...+
T Consensus 100 ~~~~~~G~~~i~lke----gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~ 175 (276)
T 3no0_A 100 FEYKAQGMPIIKLTE----GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWN 175 (276)
T ss_dssp TTTCSTTEECSCCCT----TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEES
T ss_pred hhhhcCCeEEEecCC----CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeC
Confidence 32 111112221 123555544433 3455556688888877532 11222233455666665554
Q ss_pred C-ceEEEeCCCCcEEEEEcCCCc-------eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEE--EEcC
Q psy7482 196 E-TTVCTGNEESAITAYNLTDGS-------HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITA--YNLT 258 (327)
Q Consensus 196 ~-~~l~~~~~d~~i~i~d~~~~~-------~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i--~d~~ 258 (327)
+ ..++..+..|.++...+..-. -+..+ ...+.+..+... .+...++..+.+|.+.. ++..
T Consensus 176 ~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~--~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 176 GEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPI--KEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEE--SSEEEEEEEETTSCEEEEEEEGG
T ss_pred CCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEe--CCCCEEEEEcCCCeEEEeeeCHH
Confidence 4 688888899998888764321 12222 222334443332 33445555556666666 6543
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=63.38 E-value=49 Score=25.50 Aligned_cols=194 Identities=10% Similarity=0.041 Sum_probs=100.5
Q ss_pred ccEEEEEe--CCCEEEEecCCCeEEE---EEccccccccccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCCe-
Q psy7482 15 ASVRSVAA--TSKLAASSGADETVVL---YDMVKRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQ- 87 (327)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~dg~v~~---w~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~- 87 (327)
+.+..+.. ....|+.-+.+|.++- +++........+. ....|..+.... +..+++..+.+|.++-..+....
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~ 102 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEY 102 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTT
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhh
Confidence 34555544 4445555566787664 3443222111133 345566664421 46789999999999999875432
Q ss_pred ---EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc-------eeeeeeccccCccccceEEEEEccCC
Q psy7482 88 ---LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR-------SAYITNLSSYGVGFENLDSVVWSPEG 157 (327)
Q Consensus 88 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (327)
-...+.....+. +..+........++..+..|.+..+....-. -...+.+.. .+.+..+...+++
T Consensus 103 ~~~G~~~i~lkegD~-l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~----~d~vv~~~~~~~~ 177 (276)
T 3no0_A 103 KAQGMPIIKLTEGDE-VVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK----NDETSGLRIWNGE 177 (276)
T ss_dssp CSTTEECSCCCTTCC-EEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT----TCCEEEEEEESSC
T ss_pred hcCCeEEEecCCCCE-EEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC----CCEEEEEEEeCCC
Confidence 111111112233 6665555556678888899998888764311 111122211 1235555444444
Q ss_pred c-EEEeecCCeEEEEEecCCc-------eeeEecCCCceeEEEeec-CceEEEeCCCCcEEE--EEcC
Q psy7482 158 L-LYAIPIQNKAVVFSVEKAG-------VLQTLKSESKVHSVCFLN-ETTVCTGNEESAITA--YNLT 214 (327)
Q Consensus 158 ~-~l~~~~~~~i~i~d~~~~~-------~~~~~~~~~~i~~~~~~~-~~~l~~~~~d~~i~i--~d~~ 214 (327)
. ++++...|.++...+.... -+..+...+.+..+.... +..++..+.+|.+.. ++..
T Consensus 178 ~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 178 PYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 3 4444457877777654321 122223334444443332 355666666677666 6654
No 373
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.01 E-value=15 Score=32.79 Aligned_cols=35 Identities=23% Similarity=0.430 Sum_probs=29.3
Q ss_pred cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (327)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 92 (327)
.|.++.+ +..++++-+.|.++|+|++++++++...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 4666555 3679999999999999999999988776
No 374
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=60.68 E-value=48 Score=28.86 Aligned_cols=57 Identities=14% Similarity=0.261 Sum_probs=39.7
Q ss_pred cceEEEEEccCCcEEEeec-------------CCeEEEEEecCCceeeEec--CCCceeEEEeecC-ceEEEe
Q psy7482 146 ENLDSVVWSPEGLLYAIPI-------------QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-TTVCTG 202 (327)
Q Consensus 146 ~~v~~~~~~~~~~~l~~~~-------------~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~~~ 202 (327)
.....|.|.++|.+.+... .+.+..++..+++....+. ....++.++|+|| ..|+++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4577899999998877432 1267777777777655554 3467999999999 555443
No 375
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=60.42 E-value=60 Score=25.54 Aligned_cols=187 Identities=11% Similarity=0.064 Sum_probs=103.9
Q ss_pred CCCEEEEecCCCeEEEEEcccccccc---------ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC-------
Q psy7482 23 TSKLAASSGADETVVLYDMVKRKQSG---------ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW------- 86 (327)
Q Consensus 23 ~~~~l~~~~~dg~v~~w~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~------- 86 (327)
+..++++.+.+|.|+--.+..-+... .+... +.+..+........++..+..|.++-.....-
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 56678889999999988765432211 12222 33444444444556777788888776665321
Q ss_pred --eEE-EeEEecccCCceeeEEEec---CCCEEEEEeCCCCEEEEEcCCCc-----eeeeeeccccCccccceEEEEE-c
Q psy7482 87 --QLE-KLFKKAHKGTAVNHISIHP---SGKLALSVGKDKTLRTWNLVKGR-----SAYITNLSSYGVGFENLDSVVW-S 154 (327)
Q Consensus 87 --~~~-~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~v~~~~~-~ 154 (327)
..+ ..+....... |..+...+ +..+++..+..|.++...+..-. -...+.+.. .+.+..+.. .
T Consensus 86 ~G~~i~~~l~l~~~e~-i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~----~d~lv~~~~~~ 160 (312)
T 1suu_A 86 KGQNISELINLGDQEE-ILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND----KDFVTSAEIVF 160 (312)
T ss_dssp --CBGGGTSCCCTTCC-EEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT----TCCEEEEEEEC
T ss_pred CCcChhhccCCCCCCE-EEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC----CCEEEEEEEeC
Confidence 110 0111111223 55554333 45678888999999988875321 112222222 123444444 4
Q ss_pred cCCcEEEeecCCeEEEEEecCC---------ceeeEecCCCceeEEEeec-CceEEEeCCCCcEEEEEcCC
Q psy7482 155 PEGLLYAIPIQNKAVVFSVEKA---------GVLQTLKSESKVHSVCFLN-ETTVCTGNEESAITAYNLTD 215 (327)
Q Consensus 155 ~~~~~l~~~~~~~i~i~d~~~~---------~~~~~~~~~~~i~~~~~~~-~~~l~~~~~d~~i~i~d~~~ 215 (327)
++..+++.+.+|....+....- ...-.+.....+..+...+ +..+++.+..|..+..++..
T Consensus 161 ~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 161 KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 4455666666898888876531 1122233455666665544 46678888899988888753
No 376
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=59.47 E-value=70 Score=26.00 Aligned_cols=227 Identities=10% Similarity=0.159 Sum_probs=116.5
Q ss_pred CCeEEEecCCCcEEEEEcCCC--------e--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce---
Q psy7482 66 GSHLISCSDDGSIAIFRVGSW--------Q--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS--- 132 (327)
Q Consensus 66 ~~~l~~~~~d~~i~iw~~~~~--------~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--- 132 (327)
....+.-..||.|..|-.... + .............+..++++......+.-..||.|..|-....-.
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 344555667888999864321 1 111110112222255566666566677778899999996532110
Q ss_pred ------eeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCC-c----------eeeEec--CCCceeEEEe
Q psy7482 133 ------AYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKA-G----------VLQTLK--SESKVHSVCF 193 (327)
Q Consensus 133 ------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~-~----------~~~~~~--~~~~i~~~~~ 193 (327)
......... ....|..++... ...++...+|.|+.|-.... + ....+. ....+..++.
T Consensus 142 g~~~~~~~p~~v~~l--~~~~i~~va~G~-~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~ 218 (389)
T 3kci_A 142 GNRSPCDRPRVIESL--RGIEVVDVAAGG-AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIAC 218 (389)
T ss_dssp SSCCCEEEEEECGGG--TTSCEEEEEECS-SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CCCccCcCCeEeccc--CCCeEEEEEeCc-CeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEE
Confidence 001111111 011355555542 23444555888888864321 1 111111 2345666666
Q ss_pred ec-CceEEEeCCCCcEEEEEcCCCce-----------eEEeee-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482 194 LN-ETTVCTGNEESAITAYNLTDGSH-----------LWQIKA-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG 260 (327)
Q Consensus 194 ~~-~~~l~~~~~d~~i~i~d~~~~~~-----------~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~ 260 (327)
.. +...++-..+|.|+.|-...... ...+.. ....|..++. ...+.++-..||.|+.|-....
T Consensus 219 G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~----G~~hs~alt~~G~v~~wG~n~~ 294 (389)
T 3kci_A 219 GSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC----GSQFSVALTKSGAVYTWGKGDY 294 (389)
T ss_dssp CCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEE----ETTEEEEEETTSCEEEEECCGG
T ss_pred cCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeC----CCCEEEEEeCCCeEEEEeCCCC
Confidence 54 24555566889999996432111 111111 1123556654 2334444467899999964321
Q ss_pred c-----------eeEEeecc-cCceEEEeeeCcEEEEEecCCcEEEEEccC
Q psy7482 261 S-----------HLWHIKAS-ASRIKGLASHRNHLICITSAGDLVVWELNE 299 (327)
Q Consensus 261 ~-----------~~~~~~~~-~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~ 299 (327)
- ....+... ...|..++......+....||.|+.|-.+.
T Consensus 295 GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 295 HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp GTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCT
T ss_pred CCCCCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCC
Confidence 0 11122211 235777776666666678899999997764
No 377
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=53.59 E-value=60 Score=28.40 Aligned_cols=59 Identities=10% Similarity=0.108 Sum_probs=36.5
Q ss_pred eeeEEEecCCCEEEEEeCC------------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482 101 VNHISIHPSGKLALSVGKD------------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP 163 (327)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 163 (327)
.--|.|+|.|.+++.-..+ ..+.+.+..+++.......+. ...++.++|+||++.|.+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~----gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI----GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT----TCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC----CccCcCeeECCCCCEEEEE
Confidence 3558899999866543321 134555666666554444332 1348899999998776554
No 378
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=49.97 E-value=1.5e+02 Score=26.76 Aligned_cols=233 Identities=9% Similarity=0.054 Sum_probs=114.9
Q ss_pred EEEEE-ECCCCCeEEEe----c-CCCcEEEEEcCCCeEEEe-EEecccCC-------ceeeEEEecCCCEEEEEe-----
Q psy7482 57 ITCLK-FTPEGSHLISC----S-DDGSIAIFRVGSWQLEKL-FKKAHKGT-------AVNHISIHPSGKLALSVG----- 117 (327)
Q Consensus 57 v~~~~-~~~~~~~l~~~----~-~d~~i~iw~~~~~~~~~~-~~~~~~~~-------~v~~~~~~~~~~~l~~~~----- 117 (327)
...+. ++|++++++.+ + .-..++++|+.+++.+.. + . .... ....++|..++..+++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~-~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGF-E-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCS-C-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCc-c-cccccccccccccceeeEECCCEEEEEeCCCCCC
Confidence 44455 88999877643 2 224699999999887642 2 1 1110 013458874444444321
Q ss_pred -----CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-----EEEeec----CCeEEEEEecC--CceeeE
Q psy7482 118 -----KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-----LYAIPI----QNKAVVFSVEK--AGVLQT 181 (327)
Q Consensus 118 -----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~----~~~i~i~d~~~--~~~~~~ 181 (327)
....++.|.+-+.......-+..... ........+++++ .++... ...+.+.|... ++ ...
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~ 285 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKE--YIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQK 285 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTT--SCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEE
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCC--ceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceE
Confidence 12458888776653322222222211 1133445566655 233322 35566767553 32 233
Q ss_pred ecCCCceeEEEeecCc-eEEEe-C---------CCCcEEEEEcCCCc-------eeEE-ee-ecccceEEEEEEecCCCc
Q psy7482 182 LKSESKVHSVCFLNET-TVCTG-N---------EESAITAYNLTDGS-------HLWQ-IK-ASASRIKGLVFFSIPQET 241 (327)
Q Consensus 182 ~~~~~~i~~~~~~~~~-~l~~~-~---------~d~~i~i~d~~~~~-------~~~~-~~-~~~~~v~~~~~~~s~~~~ 241 (327)
+....... +....++ +++.. + ..+.|...|+.+.. .... +. .....+..+.+ ..+.
T Consensus 286 l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~ 361 (711)
T 4hvt_A 286 INMPSDAT-LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFIST---TKDR 361 (711)
T ss_dssp CCSCTTCE-EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEE---CSSC
T ss_pred eecCCcce-EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEE---ECCE
Confidence 33222211 2233343 33322 1 46778899987642 1222 22 23345667777 3456
Q ss_pred EEEEecCCCe--EEEEEcCCCc-eeEE-eecc-cCceEEEeeeC---cEEEEEecC---CcEEEEEcc
Q psy7482 242 TVCTGNEESA--ITAYNLTDGS-HLWH-IKAS-ASRIKGLASHR---NHLICITSA---GDLVVWELN 298 (327)
Q Consensus 242 ~l~~~~~d~~--i~i~d~~~~~-~~~~-~~~~-~~~v~~~~~~~---~~l~~~~~d---g~v~iw~~~ 298 (327)
++++...++. +.++++.+++ .... +... .+.+.....++ .++++.+.. +.+..+|+.
T Consensus 362 l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 362 VFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 7777777764 7777776664 2222 2221 23455444444 455554432 345666554
No 379
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=45.99 E-value=92 Score=27.73 Aligned_cols=57 Identities=9% Similarity=0.072 Sum_probs=35.2
Q ss_pred eEEEecCCCcEE-EEEcCCCe-------EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482 68 HLISCSDDGSIA-IFRVGSWQ-------LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (327)
Q Consensus 68 ~l~~~~~d~~i~-iw~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 124 (327)
.++.|+.+|.|. +....... .+..+.......+|..|.++++...|++++.++-+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 466788888874 33222211 2223323344556999999999999999988764443
No 380
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=45.43 E-value=98 Score=23.50 Aligned_cols=145 Identities=9% Similarity=-0.013 Sum_probs=73.2
Q ss_pred CEEEEecCCCeEEEEEccccc-cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC-------CeEEE-eEEec
Q psy7482 25 KLAASSGADETVVLYDMVKRK-QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS-------WQLEK-LFKKA 95 (327)
Q Consensus 25 ~~l~~~~~dg~v~~w~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-------~~~~~-~~~~~ 95 (327)
..+++.+.+|.|+--...... ....++.... +..+........|+..+..|.++-..... |..+. .+...
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~-l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDS-FKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCCTTCC-EEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCCCCCE-EEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 445667778877765543211 1112343333 43333333344566677788766654421 22111 11111
Q ss_pred ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc-----eeeeeeccccCccccceEEEEEc--cCCcEEEeecCCeE
Q psy7482 96 HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR-----SAYITNLSSYGVGFENLDSVVWS--PEGLLYAIPIQNKA 168 (327)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~~i 168 (327)
.... |.++....++.+++.++..|.++...+..-. -...+.+... +.+..+... ++..+++...+|.+
T Consensus 82 ~~e~-Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~----d~lv~~~~~~~~~~~i~l~T~~G~~ 156 (256)
T 1zvt_A 82 PGAT-VDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN----AHVMPPVVIEDASDMLLAITQAGRM 156 (256)
T ss_dssp TTCC-EEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT----CCBCCCEECCCTTCEEEEEETTSEE
T ss_pred CCCE-EEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC----CEEEEEEEecCCCCEEEEEcCCCeE
Confidence 2233 6666443456678889999999998874321 1122222211 224444343 34445555557887
Q ss_pred EEEEecC
Q psy7482 169 VVFSVEK 175 (327)
Q Consensus 169 ~i~d~~~ 175 (327)
..+....
T Consensus 157 lrf~~~e 163 (256)
T 1zvt_A 157 LMFPVSD 163 (256)
T ss_dssp EEEEGGG
T ss_pred EEEEHHH
Confidence 7777643
No 381
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=44.45 E-value=1.2e+02 Score=24.09 Aligned_cols=230 Identities=10% Similarity=0.089 Sum_probs=121.9
Q ss_pred CCCCeEEEecCCCcEEEEEcCCCeE--EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC---------Cce
Q psy7482 64 PEGSHLISCSDDGSIAIFRVGSWQL--EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK---------GRS 132 (327)
Q Consensus 64 ~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~ 132 (327)
|+...+++.+.+|.|+--.+...+. ...+.....+. +..+........++..+..|.+.-+.... |.+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~-l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDR-LLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCC-EEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCE-EEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 5667888899999998776542110 00110112233 55555555566777778888866665422 111
Q ss_pred ee-eeeccccCccccceEEE-EEcc--CCcEEEee-cCCeEEEEEecCCc--------eeeEecCCCceeEEEeec-Cce
Q psy7482 133 AY-ITNLSSYGVGFENLDSV-VWSP--EGLLYAIP-IQNKAVVFSVEKAG--------VLQTLKSESKVHSVCFLN-ETT 198 (327)
Q Consensus 133 ~~-~~~~~~~~~~~~~v~~~-~~~~--~~~~l~~~-~~~~i~i~d~~~~~--------~~~~~~~~~~i~~~~~~~-~~~ 198 (327)
+. .+.+.. ...|..+ ...+ ++.+++.. .+|.++...+.... ....+.....+..+.... +..
T Consensus 82 i~~~i~L~~----~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~ 157 (323)
T 1wp5_A 82 IANIIPIDR----DEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNE 157 (323)
T ss_dssp GGGTSCCCT----TCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSE
T ss_pred hhhccCCCC----CCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCE
Confidence 10 111111 1225544 3332 24444444 48999888764222 122233345565555544 467
Q ss_pred EEEeCCCCcEEEEEcCCCce-------eEEeee-cccceEEEEEEecCCCc-EEEEecCCCeEEEEEcCCC-------ce
Q psy7482 199 VCTGNEESAITAYNLTDGSH-------LWQIKA-SASRIKGLVFFSIPQET-TVCTGNEESAITAYNLTDG-------SH 262 (327)
Q Consensus 199 l~~~~~d~~i~i~d~~~~~~-------~~~~~~-~~~~v~~~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~-------~~ 262 (327)
++..+.+|.+..++...-.. +.-++- ....|.++... +++. .+++.+..|..+..++..- +-
T Consensus 158 i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~--~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kG 235 (323)
T 1wp5_A 158 LFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLI--TSKDESIVVATQRGAVKKMKLTEFEKATRAKRG 235 (323)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEE--CCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCC
T ss_pred EEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEE--cCCCcEEEEEECCCceEEEEHHHccccCCCCCC
Confidence 88888899988887643211 111211 22346666554 3344 6777788888888776541 11
Q ss_pred eEEe---ecccCceEE-EeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482 263 LWHI---KASASRIKG-LASHR-NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 263 ~~~~---~~~~~~v~~-~~~~~-~~l~~~~~dg~v~iw~~~~~ 300 (327)
+..+ +.....+.. ....+ ..++..+..|.+....+..-
T Consensus 236 v~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~i 278 (323)
T 1wp5_A 236 VVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGDI 278 (323)
T ss_dssp EECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGGS
T ss_pred EECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhhc
Confidence 2222 122224443 33444 66777888888776676553
No 382
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=43.30 E-value=1.7e+02 Score=25.51 Aligned_cols=53 Identities=9% Similarity=0.153 Sum_probs=37.1
Q ss_pred CCeEEEEEcCCCceeEEeeccc-----CceEEEee---eC----cEEEEEecCCcEEEEEccCcc
Q psy7482 249 ESAITAYNLTDGSHLWHIKASA-----SRIKGLAS---HR----NHLICITSAGDLVVWELNEDV 301 (327)
Q Consensus 249 d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~---~~----~~l~~~~~dg~v~iw~~~~~~ 301 (327)
...|++.|+.++.+++.+.... ..+..+.. .. ..+..|...|.|.-+|+....
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~~~~ 286 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAGK 286 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECSCSS
T ss_pred ccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcCCCC
Confidence 3579999999999988876321 11222221 11 789999999999888887763
No 383
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=43.14 E-value=1.4e+02 Score=24.46 Aligned_cols=161 Identities=7% Similarity=-0.009 Sum_probs=91.5
Q ss_pred ccEEEEEECCCCCeEE--EecC-------------CCcEEEEEcCCC--eEEEeEEeccc----CCceeeEEEe---cC-
Q psy7482 55 GTITCLKFTPEGSHLI--SCSD-------------DGSIAIFRVGSW--QLEKLFKKAHK----GTAVNHISIH---PS- 109 (327)
Q Consensus 55 ~~v~~~~~~~~~~~l~--~~~~-------------d~~i~iw~~~~~--~~~~~~~~~~~----~~~v~~~~~~---~~- 109 (327)
-.|..+...+.+++-+ +|-- --.|.+||+.+. +.++.+..... ...+..+.+. |.
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 3578888887666433 2211 125889999999 88888743221 2237778887 22
Q ss_pred ---CCEEEEEe-CCCCEEEEEcCCCceeeeeeccccCcc-------------ccceEEEEEccC----CcEEEeec--CC
Q psy7482 110 ---GKLALSVG-KDKTLRTWNLVKGRSAYITNLSSYGVG-------------FENLDSVVWSPE----GLLYAIPI--QN 166 (327)
Q Consensus 110 ---~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~----~~~l~~~~--~~ 166 (327)
+.+++.+. ..+.|.++|+.+++............. ...+..++++|+ ++.|.... ..
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~ 246 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI 246 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC
Confidence 33444443 357799999998876554421100000 135788999997 66666554 22
Q ss_pred eEEEEE---ecCC---ceeeEecCC---CceeEEEee-cCc-eEEEeCCCCcEEEEEcCC
Q psy7482 167 KAVVFS---VEKA---GVLQTLKSE---SKVHSVCFL-NET-TVCTGNEESAITAYNLTD 215 (327)
Q Consensus 167 ~i~i~d---~~~~---~~~~~~~~~---~~i~~~~~~-~~~-~l~~~~~d~~i~i~d~~~ 215 (327)
.++-.. +++. ..++.+... ..-..+++. .++ ++++--..+.|..|+...
T Consensus 247 ~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 247 KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 333332 1222 222333322 334456665 344 455566778899999865
No 384
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=42.12 E-value=80 Score=27.25 Aligned_cols=67 Identities=9% Similarity=0.072 Sum_probs=39.9
Q ss_pred EEEEEECCC--CCeEEEecCCCcEEEEEcCCC----eEEEeEEecccCCcee-eEEEecCCCEEEEEeCCCCEE
Q psy7482 57 ITCLKFTPE--GSHLISCSDDGSIAIFRVGSW----QLEKLFKKAHKGTAVN-HISIHPSGKLALSVGKDKTLR 123 (327)
Q Consensus 57 v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~ 123 (327)
.++++.... -..++.|..+|.|.-..+... .....+.....+.+|. .+.++++...|+.++.++-++
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~k 475 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTR 475 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEeccccce
Confidence 445544432 235677888998766555322 2233332233244585 899999888999887754333
No 385
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=39.17 E-value=1e+02 Score=26.30 Aligned_cols=57 Identities=7% Similarity=-0.004 Sum_probs=35.1
Q ss_pred eEEEecCCCcEEEEEcC-CCe-------EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482 68 HLISCSDDGSIAIFRVG-SWQ-------LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (327)
Q Consensus 68 ~l~~~~~d~~i~iw~~~-~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 124 (327)
.++.|+.+|.|.-.-+. .+. .+..+.....+.+|..+.++++..+|+.++.++-+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46678888887544332 211 2223322223445999999999999999888764443
No 386
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=37.27 E-value=1.7e+02 Score=23.96 Aligned_cols=192 Identities=11% Similarity=0.029 Sum_probs=97.6
Q ss_pred eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeee-------eccccCccccceEEEEEccCCcEEEeecCCeEEEEEe
Q psy7482 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT-------NLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSV 173 (327)
Q Consensus 101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 173 (327)
|..++. .+...+.-..||.|..|-....-.+-.- ..+..-.....|..++... ...++...+|.|+.|-.
T Consensus 77 v~~va~--G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G~-~hs~al~~~G~v~~wG~ 153 (423)
T 3mvd_K 77 AVDISA--GGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGD-SHSACLLEDGRVFAWGS 153 (423)
T ss_dssp EEEEEE--CSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEECS-SEEEEEETTSCEEEEEC
T ss_pred ceEEee--CCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcCc-CeEEEEeCCCeEEEEeC
Confidence 655544 3456666678899999965431110000 0000000012365665543 23445556888888874
Q ss_pred --cC-Cce--------ee--EecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCc-----------------------
Q psy7482 174 --EK-AGV--------LQ--TLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGS----------------------- 217 (327)
Q Consensus 174 --~~-~~~--------~~--~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----------------------- 217 (327)
.. ++. .. .+.....|..++...+ ..++-..+|.|+.|-.....
T Consensus 154 ~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~-hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~ 232 (423)
T 3mvd_K 154 FRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGAD-HLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLR 232 (423)
T ss_dssp EECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSS-EEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSS
T ss_pred CCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCC-eEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccC
Confidence 21 211 11 1113445666665443 44444578999999643211
Q ss_pred eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc-----------eeEEeecccCceEEEeeeCcEEEEE
Q psy7482 218 HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS-----------HLWHIKASASRIKGLASHRNHLICI 286 (327)
Q Consensus 218 ~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-----------~~~~~~~~~~~v~~~~~~~~~l~~~ 286 (327)
+..........|..++. .....++.-..++.++.|-..... ...........|..++......+.-
T Consensus 233 p~~v~~~~~~~v~~i~~---g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~~ht~al 309 (423)
T 3mvd_K 233 PTQLIITRAKPFEAIWA---TNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVIL 309 (423)
T ss_dssp CEEECCTTCCCEEEEEE---ETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEECSSEEEEE
T ss_pred CeEEeecCCccEEEEEE---CCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcccCeEEEE
Confidence 11111111234555554 233344444688999999643311 1111111134677777666666677
Q ss_pred ecCCcEEEEEccC
Q psy7482 287 TSAGDLVVWELNE 299 (327)
Q Consensus 287 ~~dg~v~iw~~~~ 299 (327)
..||.|+.|-.+.
T Consensus 310 t~~G~v~~wG~n~ 322 (423)
T 3mvd_K 310 TTDLKCSVVGRPE 322 (423)
T ss_dssp ETTCCEEEEECCG
T ss_pred eCCCcEEEEECCC
Confidence 8899999997643
No 387
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=29.10 E-value=2e+02 Score=25.17 Aligned_cols=57 Identities=11% Similarity=0.049 Sum_probs=34.4
Q ss_pred eEEEecCCCcEEEEEcCC-C----e-EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482 68 HLISCSDDGSIAIFRVGS-W----Q-LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (327)
Q Consensus 68 ~l~~~~~d~~i~iw~~~~-~----~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 124 (327)
.++.|+.+|.|.-.-... + . .+..+.......+|..+.++++...|+.++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 566788888876443322 2 1 1222211123345899999998888988887654444
No 388
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=26.91 E-value=2.3e+02 Score=22.16 Aligned_cols=229 Identities=10% Similarity=0.157 Sum_probs=119.0
Q ss_pred CCCCeEEEecCCCcEEEEEcCCCeEEE-------eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC---C---
Q psy7482 64 PEGSHLISCSDDGSIAIFRVGSWQLEK-------LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK---G--- 130 (327)
Q Consensus 64 ~~~~~l~~~~~d~~i~iw~~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~--- 130 (327)
|+...+++.+.+|.|+--.+.+.+... .+.....+. +..+........++..+..|.+.-+.... .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~-l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDF-IDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CC-EEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCE-EEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 456678889999999877665432211 110112223 55555555566777777888766665422 1
Q ss_pred ---ceee-eeeccccCccccceEEEEEc---cCCc-EEEeecCCeEEEEEecCCc-------eeeEecCCCceeEEEeec
Q psy7482 131 ---RSAY-ITNLSSYGVGFENLDSVVWS---PEGL-LYAIPIQNKAVVFSVEKAG-------VLQTLKSESKVHSVCFLN 195 (327)
Q Consensus 131 ---~~~~-~~~~~~~~~~~~~v~~~~~~---~~~~-~l~~~~~~~i~i~d~~~~~-------~~~~~~~~~~i~~~~~~~ 195 (327)
..+. .+.+.. ...|..+..- +++. ++.+...|.++...+.... ....+.....+..+....
T Consensus 80 a~G~~i~~~l~l~~----~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~ 155 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQ----DERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTS 155 (307)
T ss_dssp SCCEEGGGTSCCCT----TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEEC
T ss_pred CCCeEhhhccCCCC----CCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeC
Confidence 1110 111111 1235555332 2344 4444558999888764321 112233345555555544
Q ss_pred C-ceEEEeCCCCcEEEEEcCCCce-------e--EEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc----
Q psy7482 196 E-TTVCTGNEESAITAYNLTDGSH-------L--WQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS---- 261 (327)
Q Consensus 196 ~-~~l~~~~~d~~i~i~d~~~~~~-------~--~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~---- 261 (327)
+ ..++..+.+|.+..++...-.. + ..+. ....|.++... .++..+++.+..|..+-.++....
T Consensus 156 ~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~--~~~~~ll~~T~~G~~Kr~~~~e~~~~~R 232 (307)
T 1zi0_A 156 GEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVP--RGDGAILTATQNGYGKRTAVAEYPTKSR 232 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECC--CSSCEEEEEETTSEEEEECGGGSCCCCT
T ss_pred CCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEe--cCCCEEEEEEcCCceEEEEHHHhccCCC
Confidence 3 6788888888888887643211 1 1222 22345555542 445678888888988888764321
Q ss_pred -----eeEEeecccCceEEEee-eC-cEEEEEecCCcEEEEEccCc
Q psy7482 262 -----HLWHIKASASRIKGLAS-HR-NHLICITSAGDLVVWELNED 300 (327)
Q Consensus 262 -----~~~~~~~~~~~v~~~~~-~~-~~l~~~~~dg~v~iw~~~~~ 300 (327)
....+....+.+-.+.. .+ ..++..+.+|.+.-+++..-
T Consensus 233 g~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~i 278 (307)
T 1zi0_A 233 ATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEI 278 (307)
T ss_dssp TSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGGS
T ss_pred CCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEecccc
Confidence 11222222244444433 33 56677778888777776553
No 389
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=26.79 E-value=3.2e+02 Score=23.85 Aligned_cols=183 Identities=13% Similarity=0.129 Sum_probs=90.0
Q ss_pred eEEEEEccccccccccc--------cccccEEEEEECCCCC-eEEEecCCCc----------------------------
Q psy7482 35 TVVLYDMVKRKQSGALM--------QHEGTITCLKFTPEGS-HLISCSDDGS---------------------------- 77 (327)
Q Consensus 35 ~v~~w~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~-~l~~~~~d~~---------------------------- 77 (327)
.|.+|++. ++.+..+. .|-..+....|..||+ .++....+|+
T Consensus 152 ~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEy 230 (591)
T 2zux_A 152 LIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEY 230 (591)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcE
Confidence 56777765 54443332 1445577777777775 4666655554
Q ss_pred EEEEEcCCCeEEEeEEecccCCce---------------eeEEEec-CCCEEEEEe---CCCCEEEEEcCCCceeeeeec
Q psy7482 78 IAIFRVGSWQLEKLFKKAHKGTAV---------------NHISIHP-SGKLALSVG---KDKTLRTWNLVKGRSAYITNL 138 (327)
Q Consensus 78 i~iw~~~~~~~~~~~~~~~~~~~v---------------~~~~~~~-~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~ 138 (327)
+.++|-.+|+.+...........+ .++++.. +...++.+- .-..+..||.+.++.......
T Consensus 231 L~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~ 310 (591)
T 2zux_A 231 LTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTL 310 (591)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEe
Confidence 788888888877766321111102 1222211 111222221 112478888877765443333
Q ss_pred cccCc--------cccceEEEEEccCCc-EEEeecCCeEEEEEecCCceeeEe--cCCCceeEEEeecC--c-eEEEeCC
Q psy7482 139 SSYGV--------GFENLDSVVWSPEGL-LYAIPIQNKAVVFSVEKAGVLQTL--KSESKVHSVCFLNE--T-TVCTGNE 204 (327)
Q Consensus 139 ~~~~~--------~~~~v~~~~~~~~~~-~l~~~~~~~i~i~d~~~~~~~~~~--~~~~~i~~~~~~~~--~-~l~~~~~ 204 (327)
..... ....+....+.-||+ -++.|+ .++| .+|+.+... .|...+....|.|+ + .++.+.+
T Consensus 311 d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs----~~iD-~dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E 385 (591)
T 2zux_A 311 DSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGS----MAVD-HDGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHE 385 (591)
T ss_dssp ETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETT----EEEC-TTSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECC
T ss_pred cCCCCCcccccccCCCCCeeEeCCCCCCceEEEee----eEEC-CCCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEec
Confidence 22210 011234444444553 222221 0112 223333333 36667777777776 2 3444444
Q ss_pred CC----cEEEEEcCCCceeEEee
Q psy7482 205 ES----AITAYNLTDGSHLWQIK 223 (327)
Q Consensus 205 d~----~i~i~d~~~~~~~~~~~ 223 (327)
++ -..+.|.++++.+....
T Consensus 386 ~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 386 DKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp CTTSSCSEEEEETTTCCEEEEEC
T ss_pred CCCCCCccEEEECCCCcEEEEcC
Confidence 31 34567888888776654
No 390
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=25.75 E-value=3.4e+02 Score=23.84 Aligned_cols=183 Identities=13% Similarity=0.135 Sum_probs=90.9
Q ss_pred eEEEEEccccccccccc--------cccccEEEEEECCCCC-eEEEecCCCc----------------------------
Q psy7482 35 TVVLYDMVKRKQSGALM--------QHEGTITCLKFTPEGS-HLISCSDDGS---------------------------- 77 (327)
Q Consensus 35 ~v~~w~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~-~l~~~~~d~~---------------------------- 77 (327)
.|.+|++. ++.+..+. .|-..+....|..||+ .++....+|+
T Consensus 156 ~l~aY~ld-G~~LW~idlg~Ni~aGahyt~~~V~DlDGDGkaEIvv~TadGt~dg~g~vigd~~~dyr~~~g~il~G~ey 234 (620)
T 2zuy_A 156 LIDAYKLD-GTFLWRINLGRNIRAGAHYTQFMVYDLDGDGKAEIAMKTADGTTDGKGHIIGDEQADFRNEQGRILSGPEY 234 (620)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSCTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCcceeecccccccccccceEecCCeE
Confidence 46677764 44433332 2455677777777775 4555555544
Q ss_pred EEEEEcCCCeEEEeEEecc-cCC--------------ceeeEEEecCC--CEEEEE-eC--CCCEEEEEcCCCceeeeee
Q psy7482 78 IAIFRVGSWQLEKLFKKAH-KGT--------------AVNHISIHPSG--KLALSV-GK--DKTLRTWNLVKGRSAYITN 137 (327)
Q Consensus 78 i~iw~~~~~~~~~~~~~~~-~~~--------------~v~~~~~~~~~--~~l~~~-~~--dg~i~iwd~~~~~~~~~~~ 137 (327)
+.++|-.+|+.+.+..... ... -..++++. || ..++.+ +. -..|..||.+.++......
T Consensus 235 L~vfdG~TG~~l~t~~~~p~rg~~~~WGD~yGnR~drf~~~vayL-DG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~ 313 (620)
T 2zuy_A 235 LTVFKGETGEALTTVEYEPPRGKLEDWGDGYGNRMDRFLAGTAYL-DGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWV 313 (620)
T ss_dssp EEEEETTTCCEEEEEECSSCCCSGGGGTSSSSTTTTCEEEEEECT-TCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEE
T ss_pred EEEEcCCCcceeeecccCCCcCccccccccccccccccceeEEec-CCCCceEEEecCcccceeEEEEEccCCceeeeeE
Confidence 5788887887777653211 111 01122222 22 122222 21 2347778887765443333
Q ss_pred ccccCc--------cccceEEEEEccCCc-EEEeecCCeEEEEEecCCceeeEec--CCCceeEEEeecC--ceE-EEeC
Q psy7482 138 LSSYGV--------GFENLDSVVWSPEGL-LYAIPIQNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE--TTV-CTGN 203 (327)
Q Consensus 138 ~~~~~~--------~~~~v~~~~~~~~~~-~l~~~~~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~--~~l-~~~~ 203 (327)
...... ....+....+.-||+ -++.++ .++| .+|+.+.... |...+.-..|.|+ ++. +.+.
T Consensus 314 ~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~Gs----~~iD-~dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~ 388 (620)
T 2zuy_A 314 FDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGA----MAVD-HDGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVH 388 (620)
T ss_dssp EETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEETT----EEEC-TTSSEEEECSCCCCSCEEEECSCTTSSSCEEEEEC
T ss_pred ecCCCCcccccccccCcCceEEecCCCCceeEEEee----eEEC-CCCCEEeecCCCCCceeEEEecCCCCCCCEEEEEe
Confidence 322110 001133344444543 222221 1223 3344444443 6667777777887 443 3444
Q ss_pred CC----CcEEEEEcCCCceeEEeee
Q psy7482 204 EE----SAITAYNLTDGSHLWQIKA 224 (327)
Q Consensus 204 ~d----~~i~i~d~~~~~~~~~~~~ 224 (327)
++ .-..++|.++++.+.....
T Consensus 389 E~~~~~~G~~~~DA~tG~vlw~~~~ 413 (620)
T 2zuy_A 389 EDATKPYGLSLRDAGTGEILWGVHA 413 (620)
T ss_dssp CCTTSSCSEEEEETTTCCEEEEECC
T ss_pred cCCCCCCceEEEECCCCcEEEEecC
Confidence 33 2567789989988877654
No 391
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=23.83 E-value=2.9e+02 Score=22.31 Aligned_cols=234 Identities=11% Similarity=0.089 Sum_probs=117.5
Q ss_pred cEEEEEeCCCEEEEecCCCeEEEEEccccccc-----------ccccc-ccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482 16 SVRSVAATSKLAASSGADETVVLYDMVKRKQS-----------GALMQ-HEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (327)
Q Consensus 16 ~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~-----------~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~ 83 (327)
.|..++......+.-..||.|..|-....-.+ ..+.. ....+..++.+.-....+.-..||.|+.|-.
T Consensus 54 ~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~ 133 (389)
T 3kci_A 54 RPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 133 (389)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEEC
T ss_pred ceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeC
Confidence 35556554444444566899999964321110 01111 1223445566655566666778999999965
Q ss_pred CCC----------eE-EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-c--------eeeeeeccccCc
Q psy7482 84 GSW----------QL-EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG-R--------SAYITNLSSYGV 143 (327)
Q Consensus 84 ~~~----------~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~--------~~~~~~~~~~~~ 143 (327)
... .. ...+ .......|..++.- ....+....+|.|..|-.... + ..........
T Consensus 134 n~~GqLG~g~~~~~~~p~~v-~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~-- 208 (389)
T 3kci_A 134 AEDGKLGHGNRSPCDRPRVI-ESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL-- 208 (389)
T ss_dssp CGGGTTCSSSCCCEEEEEEC-GGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGG--
T ss_pred CCCCcCCCCCCccCcCCeEe-cccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEeccc--
Confidence 321 11 1111 11122125555543 445566678899999975331 1 0011111111
Q ss_pred cccceEEEEEcc-CCcEEEeecCCeEEEEEecCCc-----------eeeEec--CCCceeEEEeecCceEEEeCCCCcEE
Q psy7482 144 GFENLDSVVWSP-EGLLYAIPIQNKAVVFSVEKAG-----------VLQTLK--SESKVHSVCFLNETTVCTGNEESAIT 209 (327)
Q Consensus 144 ~~~~v~~~~~~~-~~~~l~~~~~~~i~i~d~~~~~-----------~~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~ 209 (327)
....+..++... +...++...+|.++.|-..... ....+. ....|..++.-.. ..++-..+|.|+
T Consensus 209 ~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~-hs~alt~~G~v~ 287 (389)
T 3kci_A 209 QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ-FSVALTKSGAVY 287 (389)
T ss_dssp TTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT-EEEEEETTSCEE
T ss_pred CCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC-EEEEEeCCCeEE
Confidence 112366666654 3345555668999988643211 111122 2234666666544 333336789999
Q ss_pred EEEcCCCce-----------eEEeee-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482 210 AYNLTDGSH-----------LWQIKA-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD 259 (327)
Q Consensus 210 i~d~~~~~~-----------~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~ 259 (327)
.|=...... ...+.. ....|..++. ...+.+.-..||.|+.|-...
T Consensus 288 ~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~----G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 288 TWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIAT----GSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE----CSSEEEEEETTCCEEEEECCT
T ss_pred EEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEe----ccCeEEEECCCCCEEEeeCCC
Confidence 996532110 111111 1124666654 334444556789999997543
No 392
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=23.74 E-value=1.5e+02 Score=18.93 Aligned_cols=24 Identities=17% Similarity=-0.000 Sum_probs=13.6
Q ss_pred EEEEEccCCcEEEeecCCeEEEEEe
Q psy7482 149 DSVVWSPEGLLYAIPIQNKAVVFSV 173 (327)
Q Consensus 149 ~~~~~~~~~~~l~~~~~~~i~i~d~ 173 (327)
..+.+..+|++++...++.+ +|..
T Consensus 59 ~~l~l~~dGNLVl~d~~~~~-iW~S 82 (113)
T 3mez_B 59 CFMRLGHSGELDITDDRLNT-VFVS 82 (113)
T ss_dssp CEEEECTTSCEEEECTTSCE-EEEC
T ss_pred EEEEEeCCCcEEEECCCCCE-EEEC
Confidence 34566677776665544433 5654
No 393
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=21.55 E-value=4.6e+02 Score=23.84 Aligned_cols=148 Identities=10% Similarity=0.042 Sum_probs=69.3
Q ss_pred CccEEEEEe---CCCEEEEecCCCeEEEEEcccccccccccc-------ccccEEEEEECCC-CCeEEEecCCCc----E
Q psy7482 14 TASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQ-------HEGTITCLKFTPE-GSHLISCSDDGS----I 78 (327)
Q Consensus 14 ~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~-------~~~~v~~~~~~~~-~~~l~~~~~d~~----i 78 (327)
.+.|.+|++ +...++.+...+.|...+- .++.-..+.. ....+.++++.|. .+.++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDA-GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEET-TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecC-CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999998 4566777776676655542 2221111111 1346999999984 334444432211 3
Q ss_pred EEEEc-CCCeEEEeEEecc------cC-CceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeeccc-cCccccce
Q psy7482 79 AIFRV-GSWQLEKLFKKAH------KG-TAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSS-YGVGFENL 148 (327)
Q Consensus 79 ~iw~~-~~~~~~~~~~~~~------~~-~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~v 148 (327)
.||.. +.|+--..+.... .. ..+..++++|. ...++.+...+.|.. ..+.|+.-....... .......+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCe
Confidence 34433 3343333321110 01 11567888874 455666654443322 222233222221100 00011237
Q ss_pred EEEEEccCC-cEEEee
Q psy7482 149 DSVVWSPEG-LLYAIP 163 (327)
Q Consensus 149 ~~~~~~~~~-~~l~~~ 163 (327)
..+.++|.. ..+.++
T Consensus 172 ~~i~~~p~~~~~~~~~ 187 (789)
T 1sqj_A 172 TSVIFDPERNGTIYAS 187 (789)
T ss_dssp EEEEECTTSTTCEEEE
T ss_pred EEEEECCCCCCEEEEE
Confidence 888898843 344444
No 394
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=21.41 E-value=2.4e+02 Score=24.06 Aligned_cols=65 Identities=12% Similarity=0.127 Sum_probs=39.6
Q ss_pred cEEEEEe------CCC--EEEEecCCCeEEEEEc-cccc-------cccccc--cccccEEEEEECCCCCeEEEecCCCc
Q psy7482 16 SVRSVAA------TSK--LAASSGADETVVLYDM-VKRK-------QSGALM--QHEGTITCLKFTPEGSHLISCSDDGS 77 (327)
Q Consensus 16 ~v~~~~~------~~~--~l~~~~~dg~v~~w~~-~~~~-------~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (327)
..++|+. +++ .+..|..+|.|.=.-+ ..+. .+..+. ....+|..|.++++..+|.+++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4566665 243 4667888887643322 2211 122222 23578999999999999999998876
Q ss_pred EEE
Q psy7482 78 IAI 80 (327)
Q Consensus 78 i~i 80 (327)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 395
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=20.72 E-value=4.8e+02 Score=23.73 Aligned_cols=148 Identities=14% Similarity=0.065 Sum_probs=71.7
Q ss_pred cccEEEEEECCC-CCeEEEecCCCcEEEEEcCCCeEEEeEEecc------cCCceeeEEEecC-CCEEEEEeCCCC----
Q psy7482 54 EGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQLEKLFKKAH------KGTAVNHISIHPS-GKLALSVGKDKT---- 121 (327)
Q Consensus 54 ~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------~~~~v~~~~~~~~-~~~l~~~~~dg~---- 121 (327)
...|.+|+++|. ...++.++..+.|...+= .++.-..+ ... ....+.++++.|. ...++.+..+..
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG~tW~~~-~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDA-GTSKWIPL-NDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEET-TTTEEEES-CTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecC-CCCCeeEC-ccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 457999999995 456666776776655542 23322222 111 1223999999984 344554443211
Q ss_pred EEEEEc-CCCceeeeeeccccC----ccccceEEEEEccCC-cEEEeec-CCeEEEEEec-CCceeeEec-------CCC
Q psy7482 122 LRTWNL-VKGRSAYITNLSSYG----VGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVE-KAGVLQTLK-------SES 186 (327)
Q Consensus 122 i~iwd~-~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~-~~~~~~~~~-------~~~ 186 (327)
-.||-- +.|+.-......... .....+..++++|.. ..+.++. .+.| |... .++.-..+. ...
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTNGI 169 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCSTTT
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCCCC
Confidence 334432 334332222221110 001125567787743 3444444 3333 3332 233323222 124
Q ss_pred ceeEEEeecC--ceEEEeCCC
Q psy7482 187 KVHSVCFLNE--TTVCTGNEE 205 (327)
Q Consensus 187 ~i~~~~~~~~--~~l~~~~~d 205 (327)
.+..+.++|. +.++++..+
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESS
T ss_pred CeEEEEECCCCCCEEEEEEcC
Confidence 5778888874 455555544
Done!