Query psy7483
Match_columns 230
No_of_seqs 166 out of 692
Neff 4.1
Searched_HMMs 46136
Date Fri Aug 16 19:29:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7483.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7483hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0517|consensus 99.8 5.2E-22 1.1E-26 209.3 4.3 79 151-229 162-249 (2473)
2 KOG0035|consensus 99.6 2.7E-16 5.9E-21 159.7 3.9 87 144-230 129-226 (890)
3 PF00307 CH: Calponin homology 99.4 1.8E-13 3.9E-18 102.8 3.9 72 158-229 1-87 (108)
4 COG5069 SAC6 Ca2+-binding acti 99.4 8.5E-14 1.8E-18 134.7 0.8 85 146-230 114-211 (612)
5 cd00014 CH Calponin homology d 99.3 1.2E-12 2.6E-17 98.4 1.5 73 157-230 2-87 (107)
6 smart00033 CH Calponin homolog 99.2 1.3E-12 2.7E-17 97.2 0.7 73 158-230 2-87 (103)
7 PF11971 CAMSAP_CH: CAMSAP CH 99.1 5.5E-11 1.2E-15 91.3 2.2 66 165-230 10-82 (85)
8 KOG0046|consensus 96.8 0.0011 2.4E-08 66.0 3.8 76 154-230 262-347 (627)
9 KOG0035|consensus 95.9 0.002 4.2E-08 67.2 -0.3 59 156-215 421-488 (890)
10 PF06294 DUF1042: Domain of Un 94.2 0.022 4.7E-07 48.2 1.4 60 161-221 1-71 (158)
11 KOG0046|consensus 92.5 0.055 1.2E-06 54.3 1.3 71 159-230 512-597 (627)
12 KOG0518|consensus 87.2 0.13 2.9E-06 54.9 -1.0 70 157-226 147-223 (1113)
13 KOG2046|consensus 83.6 1.1 2.4E-05 39.8 3.1 65 157-222 26-100 (193)
14 KOG3631|consensus 81.3 1.4 3E-05 41.7 3.1 75 156-230 257-344 (365)
15 KOG2996|consensus 74.0 1.7 3.6E-05 44.8 1.5 67 163-229 24-99 (865)
16 KOG0532|consensus 57.3 21 0.00045 37.2 5.4 61 168-229 594-664 (722)
17 PF06395 CDC24: CDC24 Calponin 57.1 9.2 0.0002 30.1 2.3 54 168-221 3-60 (89)
18 COG5199 SCP1 Calponin [Cytoske 56.2 8.3 0.00018 33.6 2.1 64 157-221 14-86 (178)
19 KOG3000|consensus 23.8 65 0.0014 30.4 2.6 74 156-230 15-97 (295)
20 COG5069 SAC6 Ca2+-binding acti 22.0 89 0.0019 32.0 3.2 69 156-226 261-338 (612)
21 cd08542 SAM_PNT-ETS-1 Sterile 21.8 34 0.00074 26.8 0.3 19 165-186 42-60 (88)
22 KOG3170|consensus 20.4 52 0.0011 30.1 1.2 16 175-190 119-134 (240)
No 1
>KOG0517|consensus
Probab=99.84 E-value=5.2e-22 Score=209.27 Aligned_cols=79 Identities=51% Similarity=0.805 Sum_probs=76.6
Q ss_pred cCCccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCC
Q psy7483 151 ARSASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLM 221 (230)
Q Consensus 151 ~r~~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp 221 (230)
.+...++|++||.| +|+|+|||+||+||+||.||||++|||||||++|.+.++.+|++.||++||++|||+
T Consensus 162 n~E~rSAKDALLLWCQmKTAGYpnVNI~nFTtSWRdGLaFNALIHkHRPDLvDf~~L~k~na~~NL~~AFdvAE~~LGia 241 (2473)
T KOG0517|consen 162 NRETRSAKDALLLWCQMKTAGYPNVNITNFTTSWRDGLAFNALIHKHRPDLVDFDKLKKSNALYNLQHAFDVAEQELGIA 241 (2473)
T ss_pred chhhhhHHHHHHHHHHhhccCCCCcccccCccchhcchhHHHHHHhcCcchhhhcccCCCchhhHHHHHHHHHHHHcCch
Confidence 44678999999999 899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q psy7483 222 PLLDVEDI 229 (230)
Q Consensus 222 ~LLdpEDm 229 (230)
+|||||||
T Consensus 242 ~LLDpEDV 249 (2473)
T KOG0517|consen 242 KLLDPEDV 249 (2473)
T ss_pred hcCCHhhc
Confidence 99999997
No 2
>KOG0035|consensus
Probab=99.61 E-value=2.7e-16 Score=159.72 Aligned_cols=87 Identities=44% Similarity=0.767 Sum_probs=79.8
Q ss_pred cccCccccCC-ccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCC-cCccCccCHHHHHHHHHH
Q psy7483 144 KITEPNLARS-ASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFD-FDKLSPQQRRHNFELAFR 212 (230)
Q Consensus 144 ~~~~~~~~r~-~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLID-ydsL~~~~~~eNlelAFd 212 (230)
+++.+..... ..++++.||.| +|.|.||+.||+||.+|||+||++|||++| |+++.+.++.+|++.||+
T Consensus 129 r~~i~~is~~~e~~a~egllLwcq~~Ta~y~~v~v~nF~~sw~~gl~f~A~ih~~Rpdli~~y~~lt~~~~~~n~~~A~~ 208 (890)
T KOG0035|consen 129 RFAIQDISVECELSAKEGLLLWCQRKTAPYSNVNVQNFHTSWKDGLAFCALIHRHRPDLIDQYDKLTKQDPVENLNLAFD 208 (890)
T ss_pred cccccchhhhcchhhhhhhhhheecccCCccccccccceecccchHHHHHHHHhcChhhhhhhhhcCccchhHHhhhhhh
Confidence 4444444444 67899999999 899999999999999999999999999999 999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCC
Q psy7483 213 VAEEEADLMPLLDVEDIH 230 (230)
Q Consensus 213 vAE~eLGIp~LLdpEDmv 230 (230)
+||+.+||+++|+++||+
T Consensus 209 iAek~l~i~r~ld~ed~~ 226 (890)
T KOG0035|consen 209 IAEKFLGIPRLLDAEDIV 226 (890)
T ss_pred hhhhcCCcccccCccccc
Confidence 999999999999999985
No 3
>PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins []. It comprises the following groups of actin-binding domains: Actinin-type (including spectrin, fimbrin, ABP-280) (see IPR001589 from INTERPRO). Calponin-type (see IPR000557 from INTERPRO). A comprehensive review of proteins containing this type of actin-binding domains is given in []. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity []. Most proteins have two copies of the CH domain, however some proteins such as calponin and the human vav proto-oncogene (P15498 from SWISSPROT) have only a single copy. The structure of an example CH-domain has recently been solved []. This entry represents the calponin-homology (CH) domain, a superfamily of actin-binding domains found in cytoskeletal proteins (contain two CH domain in tandem repeat), in regulatory proteins from muscle, and in signal transduction proteins. This domain has a core structure consisting of a 4-helical bundle. This domain is found in: Calponin, which is involved in the regulation of contractility and organisation of the actin cytoskeleton in smooth muscle cells []. Beta-spectrin, a major component of a submembrane cytoskeletal network connecting actin filaments to integral plasma membrane proteins []. The actin-cross-linking domain of the fimbrin/plastin family of actin filament bundling or cross-linking proteins []. Utrophin,a close homologue of dystrophin []. Dystrophin, the protein found to be defective in Duchenne muscular dystrophy; this protein contains a tandem repeat of two CH domains []. Actin-binding domain of plectin, a large and widely expressed cytolinker protein []. The N-terminal microtubule-binding domain of microtubule-associated protein eb1 (end-binding protein), a member of a conserved family of proteins that localise to the plus-ends of microtubules []. Ras GTPase-activating-like protein rng2, an IQGAP protein that is essential for the assembly of an actomyosin ring during cytokinesis []. Transgelin, which suppresses androgen receptor transactivation []. ; GO: 0005515 protein binding; PDB: 2DK9_A 1WYL_A 1WKU_B 1TJT_A 3FER_A 2WA7_A 2WA5_A 2WA6_A 2R0O_A 1PXY_A ....
Probab=99.40 E-value=1.8e-13 Score=102.76 Aligned_cols=72 Identities=35% Similarity=0.747 Sum_probs=64.1
Q ss_pred hHhhhcC----------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCc-----cCHHHHHHHHHHHHHHhCCCCC
Q psy7483 158 KDRMLSW----------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSP-----QQRRHNFELAFRVAEEEADLMP 222 (230)
Q Consensus 158 K~aLL~W----------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~-----~~~~eNlelAFdvAE~eLGIp~ 222 (230)
++.|++| +..|+||..+|+||++||+||+.+.|+.+++..+.+ ....+|++.|++++++++||+.
T Consensus 1 e~~ll~Win~~l~~~~~~~~v~~~~~~l~dG~~L~~Li~~l~p~~i~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~lg~~~ 80 (108)
T PF00307_consen 1 EKELLKWINSHLEKYGKGRRVTNFSEDLRDGVVLCKLINKLFPGTIDLKKINPNLKSPFDKLENIELALEAAEKKLGIPP 80 (108)
T ss_dssp HHHHHHHHHHHHTTSTTTSTCSSTSGGGTTSHHHHHHHHHHSTTSSSGGGSSTSSSSHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHcccccCCCCcCcHHHHhcCHHHHHHHHHHHhhccchhhhccccchhhhHHHHHHHHHHHHHHHHcCCCC
Confidence 4678899 257899999999999999999999999999999954 3799999999999998899999
Q ss_pred CCCCCCC
Q psy7483 223 LLDVEDI 229 (230)
Q Consensus 223 LLdpEDm 229 (230)
.++++|+
T Consensus 81 ~~~~~dl 87 (108)
T PF00307_consen 81 LLSPEDL 87 (108)
T ss_dssp TS-HHHH
T ss_pred CCCHHHH
Confidence 9999886
No 4
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=99.38 E-value=8.5e-14 Score=134.72 Aligned_cols=85 Identities=32% Similarity=0.476 Sum_probs=75.0
Q ss_pred cCccccCCc-cchhHhhhcC----------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccC--ccCHHHHHHHHHH
Q psy7483 146 TEPNLARSA-SSIKDRMLSW----------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS--PQQRRHNFELAFR 212 (230)
Q Consensus 146 ~~~~~~r~~-~saK~aLL~W----------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~--~~~~~eNlelAFd 212 (230)
+...+..++ -..+..||.| .+.+.||+.||+||+|||||||.+|||.+|+..|+ ..+...|+.+||+
T Consensus 114 tia~inEegelt~~~~lllwc~~~t~~y~p~vd~~df~rswrdGLaf~aLIh~~rPDtld~n~ld~qkknk~~n~~qafe 193 (612)
T COG5069 114 TIATINEEGELTKHINLLLWCDEDTGGYKPEVDTFDFFRSWRDGLAFSALIHDSRPDTLDPNVLDLQKKNKALNNFQAFE 193 (612)
T ss_pred hhhcccchhhHHhhhhhheeccccccCcCCCccHHHHHHHhhhhHHHHHHHhhcCCcccCccccchhhcccchhHHHHHH
Confidence 333344444 5677899999 58899999999999999999999999999999998 7889999999999
Q ss_pred HHHHhCCCCCCCCCCCCC
Q psy7483 213 VAEEEADLMPLLDVEDIH 230 (230)
Q Consensus 213 vAE~eLGIp~LLdpEDmv 230 (230)
+|++-+||+++|.++|++
T Consensus 194 ~a~k~Igi~rli~vediv 211 (612)
T COG5069 194 NANKVIGIARLIGVEDIV 211 (612)
T ss_pred HHHHhhchHhhcCcceee
Confidence 999999999999999985
No 5
>cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Probab=99.27 E-value=1.2e-12 Score=98.39 Aligned_cols=73 Identities=38% Similarity=0.660 Sum_probs=64.4
Q ss_pred hhHhhhcC--------c-ccccCCCCCCccchhhhHHHHhhCCCCCCcCc---cCccCHHHHHHHHHHHHHHhCCCCCC-
Q psy7483 157 IKDRMLSW--------N-VQIDNFSTSWNDGMAFCALIHHFYPHAFDFDK---LSPQQRRHNFELAFRVAEEEADLMPL- 223 (230)
Q Consensus 157 aK~aLL~W--------~-v~ItNFSsSWrDG~ALCALIH~~rPdLIDyds---L~~~~~~eNlelAFdvAE~eLGIp~L- 223 (230)
.++.+++| . +.++||.++|+||++||+|++.+.|+.+++.. .......+|++.+++.+++ +||+..
T Consensus 2 ~~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~Ll~~~~p~~~~~~~~~~~~~~~~~~Ni~~~l~~~~~-~gi~~~~ 80 (107)
T cd00014 2 QKEELLRWINKVLGEYGPVTINNFSTDLKDGIALCKLLNSLSPDLIDKKKINPLSRFKRLENINLALNFAEK-LGVPVVN 80 (107)
T ss_pred hHHHHHHHHHHHhccCCCccHHHHHHHHhchHHHHHHHHHHCccccccccccccchhhHHHHHHHHHHHHHH-cCCceec
Confidence 46789999 2 26999999999999999999999999997765 4577889999999999975 999999
Q ss_pred CCCCCCC
Q psy7483 224 LDVEDIH 230 (230)
Q Consensus 224 LdpEDmv 230 (230)
++++||+
T Consensus 81 ~~~~Dl~ 87 (107)
T cd00014 81 FDAEDLV 87 (107)
T ss_pred cCHHHHh
Confidence 9999874
No 6
>smart00033 CH Calponin homology domain. Actin binding domains present in duplicate at the N-termini of spectrin-like proteins (including dystrophin, alpha-actinin). These domains cross-link actin filaments into bundles and networks. A calponin homology domain is predicted in yeasst Cdc24p.
Probab=99.25 E-value=1.3e-12 Score=97.19 Aligned_cols=73 Identities=29% Similarity=0.565 Sum_probs=62.3
Q ss_pred hHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccC----ccCHHHHHHHHHHHHHHhCCCCCCC
Q psy7483 158 KDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS----PQQRRHNFELAFRVAEEEADLMPLL 224 (230)
Q Consensus 158 K~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~----~~~~~eNlelAFdvAE~eLGIp~LL 224 (230)
++.+++| +..++||..+|+||.+||+|++.+.|+.+++.... .....+|++.+++.+++...++.++
T Consensus 2 ~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~L~~~l~p~~i~~~~~~~~~~~~~~~~Ni~~~l~~~~~~g~~~~~~ 81 (103)
T smart00033 2 EKTLLRWVNSLLAEYGKPPVTNFSSDLSDGVALCKLLNSLSPGSVDKKKVNASLSRFKKIENINLALSFAEKLGGKLVLF 81 (103)
T ss_pred hHHHHHHHHHHcccCCCCcHHHHHHHHccHHHHHHHHHHHCCCcCChhhccccccHHHHHHhHHHHHHHHHHcCCeeecc
Confidence 4678999 36789999999999999999999999999876654 4567899999999998774457899
Q ss_pred CCCCCC
Q psy7483 225 DVEDIH 230 (230)
Q Consensus 225 dpEDmv 230 (230)
+++|++
T Consensus 82 ~~~Dl~ 87 (103)
T smart00033 82 EPEDLV 87 (103)
T ss_pred CHHHHh
Confidence 999874
No 7
>PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins.
Probab=99.07 E-value=5.5e-11 Score=91.27 Aligned_cols=66 Identities=21% Similarity=0.432 Sum_probs=57.3
Q ss_pred cccccCCCCCCccchhhhHHHHhhCCCCCCcCccC------ccCHHHHHHHHHHHHHHhCCCCCC-CCCCCCC
Q psy7483 165 NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS------PQQRRHNFELAFRVAEEEADLMPL-LDVEDIH 230 (230)
Q Consensus 165 ~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~------~~~~~eNlelAFdvAE~eLGIp~L-LdpEDmv 230 (230)
.+.|.||+.||+||++||+|||+|+|++++++.+. .....+|+++..+.++++||.... |++|||.
T Consensus 10 ~~~v~dl~~~l~DG~~Lc~Lih~Y~P~~l~~~~I~~~~~mS~~~~l~N~~ll~~~c~~~l~~~~~~l~~edl~ 82 (85)
T PF11971_consen 10 FPPVEDLTQDLSDGRALCALIHFYCPQLLPLEDICLKTTMSQADSLYNLQLLNSFCQSHLGFSCCHLEPEDLL 82 (85)
T ss_pred CcchhhhhhhhccHHHHHHHHHHhCcceecHhHcccccchHHHHhhhhHHHHHHHHHHHcCCCcCcCCHHHHh
Confidence 78899999999999999999999999999886664 467889999999999999866643 4888873
No 8
>KOG0046|consensus
Probab=96.80 E-value=0.0011 Score=65.98 Aligned_cols=76 Identities=22% Similarity=0.337 Sum_probs=69.9
Q ss_pred ccchhHhhhcC----------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCC
Q psy7483 154 ASSIKDRMLSW----------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPL 223 (230)
Q Consensus 154 ~~saK~aLL~W----------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~L 223 (230)
+.+..+.||+| .-.++||+++..||.+..-|++...|...+...|...+..+..+..+.-|| ++|..++
T Consensus 262 ~L~PEkiLLrW~N~HL~kag~~k~~~nFs~DikD~eaY~~LLnqlap~~~~~~~l~~~d~l~RA~~vLq~Ae-kl~Cr~~ 340 (627)
T KOG0046|consen 262 RLPPEKILLRWMNYHLKKAGWKKTVTNFSSDIKDSEAYTHLLNQLAPEHCSPAPLQETDDLERAELVLQQAE-KLDCRRY 340 (627)
T ss_pred cCCHHHHHHHHHHHHHHhcccceehhhhhhhhccHHHHHHHHHHhccccCCccccccCChHhHHHHHHHHHH-hcCCccc
Confidence 35788999999 455899999999999999999999999999999999999999999999996 7999999
Q ss_pred CCCCCCC
Q psy7483 224 LDVEDIH 230 (230)
Q Consensus 224 LdpEDmv 230 (230)
++|.|++
T Consensus 341 ltp~dvV 347 (627)
T KOG0046|consen 341 LTPTDVV 347 (627)
T ss_pred cCHHHHh
Confidence 9999975
No 9
>KOG0035|consensus
Probab=95.88 E-value=0.002 Score=67.24 Aligned_cols=59 Identities=19% Similarity=0.208 Sum_probs=52.6
Q ss_pred chhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHH
Q psy7483 156 SIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAE 215 (230)
Q Consensus 156 saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE 215 (230)
.....||.| .+.+.++ .+|+.|.+||||+|.|.|++++++.+...+...|+..+|+.++
T Consensus 421 d~~~~lle~~ke~~~~~ea~~~~~~-~~~~~~e~~~ai~~~~~~~~~~~~~~~a~~~q~i~dq~~~~~~ 488 (890)
T KOG0035|consen 421 DYGQALLEECKELTKKHEAFESDLS-AHQDNVEAFCAIAHELNELLYDDAKLVAADCQHICDQWDDLGQ 488 (890)
T ss_pred chHHHHHHHHHhhcccccccccchh-hhhcchhHHHHHHHHhhhhhhhhhhhhhhhhhhccccccccch
Confidence 445677888 6888888 9999999999999999999999999999999999999998764
No 10
>PF06294 DUF1042: Domain of Unknown Function (DUF1042); InterPro: IPR010441 This is a family of proteins of unknown function.; PDB: 2EE7_A.
Probab=94.25 E-value=0.022 Score=48.19 Aligned_cols=60 Identities=22% Similarity=0.492 Sum_probs=34.8
Q ss_pred hhcC------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCcc----CHHHHHHHH-HHHHHHhCCCC
Q psy7483 161 MLSW------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQ----QRRHNFELA-FRVAEEEADLM 221 (230)
Q Consensus 161 LL~W------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~----~~~eNlelA-FdvAE~eLGIp 221 (230)
|++| .+.+.|+..+|.||..++.|+++|.|..+|+....+. ....|-+.= ..+. +.+||+
T Consensus 1 l~~WL~~l~ls~~~~n~~rDfsdG~lvAEIl~~y~p~~vdlh~y~~~~s~~~Kl~NW~~Ln~kvl-~kl~~~ 71 (158)
T PF06294_consen 1 LLKWLQSLDLSRPPKNIRRDFSDGYLVAEILSRYYPKLVDLHNYSNGNSVAQKLNNWETLNEKVL-KKLGIK 71 (158)
T ss_dssp HHHHHHHS--S--SS-HHHHHTTSHHHHHHHHHH-TTT---SS----SSHHHHHHHHHHHHHHTT-GGGT--
T ss_pred ChHHHhcCCCCCCCCchHHHcccccHHHHHHHHHCCCCccccccCCCCCHHHHHHHHHHHHHHHH-HHcCCC
Confidence 5677 5678899999999999999999999999988777643 344454443 4443 356654
No 11
>KOG0046|consensus
Probab=92.52 E-value=0.055 Score=54.33 Aligned_cols=71 Identities=23% Similarity=0.366 Sum_probs=58.5
Q ss_pred HhhhcC----------cccccCCC-CCCccchhhhHHHHhhCCCCCCcCccC----ccCHHHHHHHHHHHHHHhCCCCCC
Q psy7483 159 DRMLSW----------NVQIDNFS-TSWNDGMAFCALIHHFYPHAFDFDKLS----PQQRRHNFELAFRVAEEEADLMPL 223 (230)
Q Consensus 159 ~aLL~W----------~v~ItNFS-sSWrDG~ALCALIH~~rPdLIDydsL~----~~~~~eNlelAFdvAE~eLGIp~L 223 (230)
+-++.| .-.|..|. .+-.||+.+.-||+...|..|||+-+. ..+...|.++|+++| +++|-.-.
T Consensus 512 ~dIv~WaN~klk~~Gk~s~IrSFkD~siS~g~~vLDLidaI~P~~Vn~~LV~~G~t~EdK~~NAkYaIS~A-RKiGa~Iy 590 (627)
T KOG0046|consen 512 SDIVNWANRKLKKAGKKSQIRSFKDKSISDGLFVLDLLDAIKPGVVNYSLVTSGNTDEEKLLNAKYAISVA-RKLGASIY 590 (627)
T ss_pred HHHHHHHHHHHHhcCCccccccccCcccccCcchHHHHhhcCcCccchhhccCCCChhhhhhcchhhHhHH-HhhCceEE
Confidence 556677 34566664 346789999999999999999998775 467788999999999 68999999
Q ss_pred CCCCCCC
Q psy7483 224 LDVEDIH 230 (230)
Q Consensus 224 LdpEDmv 230 (230)
+-|||++
T Consensus 591 aLPEDIv 597 (627)
T KOG0046|consen 591 ALPEDIV 597 (627)
T ss_pred eccHHHh
Confidence 9999985
No 12
>KOG0518|consensus
Probab=87.21 E-value=0.13 Score=54.86 Aligned_cols=70 Identities=20% Similarity=0.142 Sum_probs=60.1
Q ss_pred hhHhhhcC------cccccCCCCCCccchhhhHHHHhhCCCCC-CcCccCccCHHHHHHHHHHHHHHhCCCCCCCCC
Q psy7483 157 IKDRMLSW------NVQIDNFSTSWNDGMAFCALIHHFYPHAF-DFDKLSPQQRRHNFELAFRVAEEEADLMPLLDV 226 (230)
Q Consensus 157 aK~aLL~W------~v~ItNFSsSWrDG~ALCALIH~~rPdLI-DydsL~~~~~~eNlelAFdvAE~eLGIp~LLdp 226 (230)
.+..++.| .+.+.+|+++|+||+||.+++...+|+.. +|.-..+....+|++.|++-+++.+-.++.+.+
T Consensus 147 ~e~~~~e~~~~~sP~~~~v~~~td~n~~~Alg~~le~~~vg~p~~f~v~~~Ga~~gnl~~a~~gpse~~~~~~di~~ 223 (1113)
T KOG0518|consen 147 VEVLYDEKPVPASPFVVKVNEGTDWNDVQALGPGLESARVGKPNVFEVETPGAGQGNLEVAVEGPSEALTVIPDIKP 223 (1113)
T ss_pred hhhhhcccccccCCceeccccccCcccceEeccchhhcccCCCceeEEecCCccccceeeeecChhhhcccccccCC
Confidence 33456667 68899999999999999999999999988 688888888899999999999988877777765
No 13
>KOG2046|consensus
Probab=83.63 E-value=1.1 Score=39.76 Aligned_cols=65 Identities=17% Similarity=0.374 Sum_probs=47.0
Q ss_pred hhHhhhcC-------ccc-ccCCCCCCccchhhhHHHHhhCCCCC--CcCccCccCHHHHHHHHHHHHHHhCCCCC
Q psy7483 157 IKDRMLSW-------NVQ-IDNFSTSWNDGMAFCALIHHFYPHAF--DFDKLSPQQRRHNFELAFRVAEEEADLMP 222 (230)
Q Consensus 157 aK~aLL~W-------~v~-ItNFSsSWrDG~ALCALIH~~rPdLI--DydsL~~~~~~eNlelAFdvAE~eLGIp~ 222 (230)
....|+.| +.. -.||.....||..||-||....|... -+.+.-.-.-.||+..=...| +.+|++.
T Consensus 26 ~~~el~~WI~~~~~~~~~~~~~f~~~LKDG~iLCkl~N~l~p~~~~~~~~s~~~f~qmEnIs~Fi~a~-~~ygv~~ 100 (193)
T KOG2046|consen 26 LEKELREWIENVVLTELPARGDFQDLLKDGVILCKLINKLYPGVVKKINESKMAFVQMENISNFIKAA-KKYGVPE 100 (193)
T ss_pred HHHHHHHHHHHhhccCCCcccCHHHHHcchHHHHHHHHHhCcCcccccccccccHHHHHHHHHHHHHH-HhcCCCh
Confidence 44778999 233 57888999999999999999999554 334444555667776555555 6899874
No 14
>KOG3631|consensus
Probab=81.33 E-value=1.4 Score=41.66 Aligned_cols=75 Identities=21% Similarity=0.418 Sum_probs=49.6
Q ss_pred chhHhhhcC--------cccccCCCCCCccchhhhHHHHhh---CCCCCCc--CccCccCHHHHHHHHHHHHHHhCCCCC
Q psy7483 156 SIKDRMLSW--------NVQIDNFSTSWNDGMAFCALIHHF---YPHAFDF--DKLSPQQRRHNFELAFRVAEEEADLMP 222 (230)
Q Consensus 156 saK~aLL~W--------~v~ItNFSsSWrDG~ALCALIH~~---rPdLIDy--dsL~~~~~~eNlelAFdvAE~eLGIp~ 222 (230)
..|++|+.. ++.|+|+.+-|.||.-|.-|+--. +=-+-.| .-=+......|..+||++.++..=-.+
T Consensus 257 ~VK~sli~FvNkhLnklnLeVt~LdtQFaDGV~LvLL~GlLEgyFvpL~~F~Ltp~S~eekv~NVsfAfeLm~D~GL~kp 336 (365)
T KOG3631|consen 257 VVKKSLITFVNKHLNKLNLEVTELDTQFADGVYLVLLMGLLEGYFVPLHHFYLTPNSFEEKVHNVSFAFELMKDGGLEKP 336 (365)
T ss_pred HHHHHHHHHHHHHhhhccceeehhhhhhccchHHHHHHHhhccceeecceeecCCCCHHHHHHHHHHHHHHHHccCcCCC
Confidence 345555555 899999999999997766555432 2111111 112245678999999999987544446
Q ss_pred CCCCCCCC
Q psy7483 223 LLDVEDIH 230 (230)
Q Consensus 223 LLdpEDmv 230 (230)
-..||||+
T Consensus 337 ~~rpeDIv 344 (365)
T KOG3631|consen 337 KVRPEDIV 344 (365)
T ss_pred CCChHHhh
Confidence 66788774
No 15
>KOG2996|consensus
Probab=74.03 E-value=1.7 Score=44.82 Aligned_cols=67 Identities=21% Similarity=0.474 Sum_probs=51.6
Q ss_pred cC-cccccCCCCCCccchhhhHHHHhhCCCCCCcCccC------ccCHHHHHHHHHHHHHHhCCCC--CCCCCCCC
Q psy7483 163 SW-NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS------PQQRRHNFELAFRVAEEEADLM--PLLDVEDI 229 (230)
Q Consensus 163 ~W-~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~------~~~~~eNlelAFdvAE~eLGIp--~LLdpEDm 229 (230)
.| +-.|-+|..--|||..||-|+|...|..||...+. +-=-..|++.=..+..+.||+. -|.++.|+
T Consensus 24 tw~~a~v~dlAq~LRDGvLLCqLlnnL~p~sIdlkeIn~rpQmSqFLClkNIrtFl~~C~~~Fglr~seLF~afDL 99 (865)
T KOG2996|consen 24 TWDSAQVFDLAQALRDGVLLCQLLNNLVPHSIDLKEINLRPQMSQFLCLKNIRTFLMFCCEKFGLRDSELFEAFDL 99 (865)
T ss_pred ccCcchHHHHHHHHhhhhHHHHHHhhcCCCcccHHHhhcCCCccchhhHhhHHHHHHHHHHHhCCchhhhcchhhh
Confidence 35 56677888889999999999999999999987764 2234677777777777889986 46666654
No 16
>KOG0532|consensus
Probab=57.33 E-value=21 Score=37.16 Aligned_cols=61 Identities=23% Similarity=0.407 Sum_probs=40.9
Q ss_pred ccCCCCCCccchhhhHHHHhhCCCCCC--------cCccCccCHHHHHHHHHHHHHHhCCCCC--CCCCCCC
Q psy7483 168 IDNFSTSWNDGMAFCALIHHFYPHAFD--------FDKLSPQQRRHNFELAFRVAEEEADLMP--LLDVEDI 229 (230)
Q Consensus 168 ItNFSsSWrDG~ALCALIH~~rPdLID--------ydsL~~~~~~eNlelAFdvAE~eLGIp~--LLdpEDm 229 (230)
-.||..--.||..||.|+.+.||-.+. ..+|.-....-|.+.=++.. +++|||- |-++.||
T Consensus 594 p~Dl~aALtDGViLChLaN~lRPRSV~SIHVPSPaV~klsmarcrrNVdnFLeaC-RkiGVpEa~lCS~~Di 664 (722)
T KOG0532|consen 594 PEDLAAALTDGVILCHLANHLRPRSVASIHVPSPAVPKLSMARCRRNVDNFLEAC-RKIGVPEADLCSPMDI 664 (722)
T ss_pred chhHHHHhhcchhhHhhhcccCCCCccceecCCCccchhHHHHHHHhHHHHHHHH-HHcCCChHhhcCHHHh
Confidence 368999999999999999999995442 23343344455555544444 6899983 4445554
No 17
>PF06395 CDC24: CDC24 Calponin; InterPro: IPR010481 This is a calponin homology domain.
Probab=57.11 E-value=9.2 Score=30.08 Aligned_cols=54 Identities=13% Similarity=0.345 Sum_probs=32.9
Q ss_pred ccCCCCCCccchhhhHHHHhhCCCC-CCcCccCccCHHHHHHHHHHHH---HHhCCCC
Q psy7483 168 IDNFSTSWNDGMAFCALIHHFYPHA-FDFDKLSPQQRRHNFELAFRVA---EEEADLM 221 (230)
Q Consensus 168 ItNFSsSWrDG~ALCALIH~~rPdL-IDydsL~~~~~~eNlelAFdvA---E~eLGIp 221 (230)
|+-+...++-|..||.|.....|+. ++.+.....+.+.+-..+|+.. .++|||+
T Consensus 3 Vt~LW~~fr~G~PLc~lfNal~p~~~L~v~~~~~~~~k~~K~ai~~Fi~ack~~L~~~ 60 (89)
T PF06395_consen 3 VTQLWKLFRQGYPLCVLFNALQPEEPLPVDPVSSDDLKVCKKAIYKFIQACKQELGFP 60 (89)
T ss_pred HHHHHHHHhCcCcHHHHHHccCCccCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCC
Confidence 4445667899999999999999973 4443333333333333333322 3568876
No 18
>COG5199 SCP1 Calponin [Cytoskeleton]
Probab=56.20 E-value=8.3 Score=33.64 Aligned_cols=64 Identities=11% Similarity=0.293 Sum_probs=49.6
Q ss_pred hhHhhhcC-------cccc-cCCCCCCccchhhhHHHHhhCCCCCCcCccC-ccCHHHHHHHHHHHHHHhCCCC
Q psy7483 157 IKDRMLSW-------NVQI-DNFSTSWNDGMAFCALIHHFYPHAFDFDKLS-PQQRRHNFELAFRVAEEEADLM 221 (230)
Q Consensus 157 aK~aLL~W-------~v~I-tNFSsSWrDG~ALCALIH~~rPdLIDydsL~-~~~~~eNlelAFdvAE~eLGIp 221 (230)
+.+..-.| .+.. -||-++..||..||-|+..-.|.-|.|.+.. +--..+|+-.=++.+ +++++|
T Consensus 14 ~~kev~~Wie~~l~~k~~ppgdll~~lkdGv~lCril~ea~~~~I~yKeSkmpFVQmenIs~Fin~~-~k~~vp 86 (178)
T COG5199 14 QQKEVTLWIETVLGEKFEPPGDLLSLLKDGVRLCRILNEASPLDIKYKESKMPFVQMENISSFINGL-KKLRVP 86 (178)
T ss_pred HHHHHHHHHHHHHHhhhCCcccHHHHHhcchHHHHHHhhcCcccceecccCCceeeHHHHHHHHHHH-HHhCCC
Confidence 33556678 3333 6888999999999999999999999887765 666778888777777 567776
No 19
>KOG3000|consensus
Probab=23.78 E-value=65 Score=30.40 Aligned_cols=74 Identities=18% Similarity=0.390 Sum_probs=47.1
Q ss_pred chhHhhhcC--cccccCCCCCC--ccchhhhHHHHhhCCCCCCcCccC-----ccCHHHHHHHHHHHHHHhCCCCCCCCC
Q psy7483 156 SIKDRMLSW--NVQIDNFSTSW--NDGMAFCALIHHFYPHAFDFDKLS-----PQQRRHNFELAFRVAEEEADLMPLLDV 226 (230)
Q Consensus 156 saK~aLL~W--~v~ItNFSsSW--rDG~ALCALIH~~rPdLIDydsL~-----~~~~~eNlelAFdvAE~eLGIp~LLdp 226 (230)
..+..+|.| .+---||+.=| ..|-|.|-|-+...|+.|....++ .-....|++.=- .+-..+||...+++
T Consensus 15 ~sR~E~laW~N~~l~~n~~kIEe~~tGaaycqlmd~l~p~~i~lkkVkf~A~~Ehe~i~Nfk~lQ-~~f~klgi~k~v~v 93 (295)
T KOG3000|consen 15 ESRLEILAWINDLLQLNLTKIEELCTGAAYCQLMDMLFPPDIPLKKVKFAARLEHEYIPNFKVLQ-TCFNKLGIDKVVDV 93 (295)
T ss_pred cchHHHHHHHHhhhhcchhhhhhhcccchhhhhhhhccCCccccccccccccccchhhhhhHHHH-HHHHhcCCcccccH
Confidence 355778999 33334444444 458999999999999877555443 233333333222 22247999999998
Q ss_pred CCCC
Q psy7483 227 EDIH 230 (230)
Q Consensus 227 EDmv 230 (230)
++++
T Consensus 94 dkLv 97 (295)
T KOG3000|consen 94 DKLV 97 (295)
T ss_pred HHHh
Confidence 8764
No 20
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=22.03 E-value=89 Score=32.02 Aligned_cols=69 Identities=19% Similarity=0.174 Sum_probs=50.6
Q ss_pred chhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCCCCC
Q psy7483 156 SIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPLLDV 226 (230)
Q Consensus 156 saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~LLdp 226 (230)
.....|++| ++++.||+..-+||.-..-|+..+. .++.-.-+...+-.+.+......|| .+.+.+.+.|
T Consensus 261 ~yE~~l~rll~~i~~~q~~w~v~~f~k~vsd~en~t~ll~ql~-alcsRa~lettdl~sl~gqi~~n~e-~y~~RKY~pP 338 (612)
T COG5069 261 PYEIILLRLLNLIHLKQANWKVVNFSKDVSDGENYTDLLNQLN-ALCSRAPLETTDLHSLAGQILQNAE-KYDCRKYLPP 338 (612)
T ss_pred CHHHHHHHHHHHHHHHhcccchhhhhhhhhhHHHHHHHHHHHH-HHhhcccchhhhHHHHHHHHHHHHH-HhhhhccCCC
Confidence 345667888 7889999999999998888888876 4554444444455556666777775 6888888877
No 21
>cd08542 SAM_PNT-ETS-1 Sterile alpha motif (SAM)/Pointed domain of ETS-1. SAM Pointed domain of ETS-1 subfamily of ETS transcriptional activators is a protein-protein interaction domain. The ETS-1 activator is regulated by phosphorylation. It contains a docking site for the ERK2 MAP (Mitogen Activated Protein) kinase, while the ERK2 phosphorylation site is located in the N-terminal disordered region upstream of the SAM Pointed domain. Mutations of the kinase docking site residues inhibit phosphorylation. ETS-1 activators play role in a number of different physiological processes, and they are expressed during embryonic development, including blood vessel formation, hematopoietic, lymphoid, neuronal and osteogenic differentiation. The Ets-1 gene is a proto-oncogene involved in progression of different tumors (including breast cancer, meningioma, and prostate cancer). Members of this subfamily are potential molecular targets for selective cancer therapy.
Probab=21.83 E-value=34 Score=26.84 Aligned_cols=19 Identities=37% Similarity=0.681 Sum_probs=14.8
Q ss_pred cccccCCCCCCccchhhhHHHH
Q psy7483 165 NVQIDNFSTSWNDGMAFCALIH 186 (230)
Q Consensus 165 ~v~ItNFSsSWrDG~ALCALIH 186 (230)
++.+.+|. -+|++||+|=+
T Consensus 42 ~i~~~~F~---m~Gk~LC~Ls~ 60 (88)
T cd08542 42 GVDFQKFC---MNGAALCALGK 60 (88)
T ss_pred CCCcccCC---CCHHHHHcCCH
Confidence 67777773 68999999755
No 22
>KOG3170|consensus
Probab=20.41 E-value=52 Score=30.13 Aligned_cols=16 Identities=31% Similarity=0.885 Sum_probs=13.7
Q ss_pred CccchhhhHHHHhhCC
Q psy7483 175 WNDGMAFCALIHHFYP 190 (230)
Q Consensus 175 WrDG~ALCALIH~~rP 190 (230)
+.+|+++|+||+++.-
T Consensus 119 y~~gvp~c~Ll~~~l~ 134 (240)
T KOG3170|consen 119 YKQGVPLCALLSHHLQ 134 (240)
T ss_pred eccccHHHHHHHHHHH
Confidence 5899999999998753
Done!