Query psy7483
Match_columns 230
No_of_seqs 166 out of 692
Neff 4.1
Searched_HMMs 29240
Date Fri Aug 16 19:29:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7483.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7483hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bkr_A Spectrin beta chain; fi 99.9 2.8E-27 9.6E-32 185.4 3.9 76 155-230 2-86 (109)
2 1wyl_A NEDD9 interacting prote 99.9 6.7E-27 2.3E-31 185.0 5.2 77 154-230 5-90 (116)
3 1wyq_A Spectrin beta chain, br 99.9 1.6E-26 5.5E-31 185.7 7.4 78 153-230 4-90 (127)
4 2d87_A Smoothelin splice isofo 99.9 2.6E-26 9E-31 184.9 5.2 77 154-230 5-90 (128)
5 2d88_A Protein mical-3; all al 99.9 1.2E-26 4E-31 185.0 3.0 78 153-230 6-92 (121)
6 1bhd_A Utrophin; calponin homo 99.9 1.6E-26 5.3E-31 183.6 1.7 76 154-229 6-90 (118)
7 2d89_A EHBP1 protein; all alph 99.9 1.6E-25 5.6E-30 177.7 2.2 77 153-230 6-91 (119)
8 2wa7_A Filamin-B; disease muta 99.8 2.8E-21 9.6E-26 168.1 5.8 78 153-230 140-224 (245)
9 4b7l_A Filamin-B; structural p 99.8 2.2E-21 7.4E-26 177.3 5.2 78 153-230 137-221 (347)
10 3hoc_A Filamin-A; calponin hom 99.8 2.2E-21 7.4E-26 173.0 5.0 77 154-230 168-251 (272)
11 1wku_A Alpha-actinin 3; calpon 99.8 2E-21 6.9E-26 170.2 4.7 77 154-230 138-223 (254)
12 3f7p_A Plectin-1; plakin, hemi 99.8 4.4E-21 1.5E-25 173.1 3.0 77 154-230 187-272 (296)
13 1sh5_A Plectin 1, PLTN, PCN; a 99.8 9.5E-21 3.3E-25 164.0 2.7 77 154-230 131-216 (245)
14 1dxx_A Dystrophin; structural 99.8 4E-20 1.4E-24 160.7 2.8 76 155-230 134-219 (246)
15 1aoa_A T-fimbrin; actin-bindin 99.7 2.5E-18 8.5E-23 151.3 4.9 75 155-230 167-259 (275)
16 1sjj_A Actinin; 3-helix bundle 99.7 1.4E-18 4.6E-23 169.9 1.2 77 154-230 119-204 (863)
17 1rt8_A Fimbrin; filamentous ac 99.7 1.4E-17 4.9E-22 158.0 3.7 74 155-230 408-496 (513)
18 1rt8_A Fimbrin; filamentous ac 99.7 2.9E-17 1E-21 155.8 4.2 75 155-230 160-244 (513)
19 1pxy_A Fimbrin-like protein; c 99.7 2.4E-17 8.2E-22 156.0 3.0 74 156-230 397-485 (506)
20 1wjo_A T-plastin; CH domain, a 99.6 1E-16 3.5E-21 129.4 4.4 74 156-230 7-96 (124)
21 1pxy_A Fimbrin-like protein; c 99.6 1.3E-16 4.4E-21 151.0 4.1 75 155-230 151-235 (506)
22 2vzc_A Alpha-parvin; membrane, 97.6 4.4E-05 1.5E-09 61.1 4.4 74 156-230 22-109 (131)
23 2yrn_A Neuron navigator 2 isof 97.0 0.00022 7.4E-09 56.3 1.8 74 155-229 17-104 (129)
24 1wyo_A Protein EB3, microtubul 96.8 0.00092 3.1E-08 55.9 4.0 73 156-230 22-104 (159)
25 1wku_A Alpha-actinin 3; calpon 96.8 0.00088 3E-08 58.3 3.8 73 156-229 27-110 (254)
26 3hoc_A Filamin-A; calponin hom 96.7 0.0014 4.9E-08 58.1 4.5 73 155-229 46-132 (272)
27 2wa7_A Filamin-B; disease muta 96.6 0.0013 4.3E-08 56.9 3.8 74 154-229 18-105 (245)
28 3f7p_A Plectin-1; plakin, hemi 96.6 0.0012 4.2E-08 59.4 3.8 73 156-229 73-155 (296)
29 2qjz_A Microtubule-associated 96.5 0.0016 5.5E-08 52.2 3.7 73 156-230 5-87 (123)
30 1ujo_A Transgelin; CH domain, 96.2 0.0019 6.4E-08 52.3 2.2 72 157-229 10-101 (144)
31 1h67_A Calponin alpha; cytoske 96.1 0.0012 4.1E-08 50.9 0.5 71 158-229 5-85 (108)
32 1aoa_A T-fimbrin; actin-bindin 96.0 0.0021 7E-08 56.3 1.9 74 155-229 23-119 (275)
33 1p2x_A RNG2 protein, RAS GTPas 96.0 0.004 1.4E-07 51.2 3.2 71 158-229 13-96 (159)
34 1wyp_A Calponin 1; CH domain, 95.9 0.0035 1.2E-07 50.3 2.7 72 157-229 18-99 (136)
35 1sjj_A Actinin; 3-helix bundle 95.7 0.0088 3E-07 58.6 4.8 75 155-230 7-92 (863)
36 1dxx_A Dystrophin; structural 95.7 0.0068 2.3E-07 52.2 3.6 74 155-229 15-99 (246)
37 4b7l_A Filamin-B; structural p 95.7 0.0057 1.9E-07 55.7 3.1 74 155-229 16-102 (347)
38 1wyn_A Calponin-2; CH domain, 95.5 0.0035 1.2E-07 50.9 1.0 72 157-229 18-99 (146)
39 1p5s_A RAS GTPase-activating-l 95.5 0.0062 2.1E-07 52.1 2.6 72 157-229 56-140 (203)
40 3i6x_A P195, RAS GTPase-activa 95.4 0.0044 1.5E-07 52.7 1.3 71 157-228 48-140 (193)
41 2ee7_A Sperm flagellar protein 95.3 0.0093 3.2E-07 48.0 2.9 46 157-202 16-67 (127)
42 2rr8_A Iqgap1 protein; F-actin 95.2 0.0044 1.5E-07 52.3 0.6 71 158-229 27-119 (190)
43 1sh5_A Plectin 1, PLTN, PCN; a 95.0 0.03 1E-06 48.0 5.4 73 156-229 12-99 (245)
44 1wym_A Transgelin-2; CH domain 94.7 0.0074 2.5E-07 49.3 0.8 71 157-228 18-107 (155)
45 2l3g_A RHO guanine nucleotide 94.7 0.027 9.2E-07 44.8 4.0 73 156-229 12-101 (126)
46 1wyr_A RHO guanine nucleotide 94.3 0.032 1.1E-06 43.8 3.6 57 171-229 35-94 (121)
47 2r8u_A Microtubule-associated 93.0 0.08 2.7E-06 47.5 4.2 73 156-230 15-97 (268)
48 2bry_A NEDD9 interacting prote 93.0 0.022 7.5E-07 52.9 0.6 31 98-128 467-497 (497)
49 4abo_I MAL3, microtubule integ 90.1 0.18 6E-06 41.7 3.0 71 157-230 7-87 (145)
50 3ky9_A Proto-oncogene VAV; cal 90.0 0.11 3.7E-06 49.5 1.9 56 167-222 32-93 (587)
51 2qjx_A Protein BIM1; calponin 89.1 0.3 1E-05 39.3 3.5 72 156-230 10-91 (127)
52 1wix_A HOOK homolog 1, RSGI RU 58.6 5.1 0.00017 32.8 2.4 61 155-216 8-83 (164)
No 1
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=99.93 E-value=2.8e-27 Score=185.36 Aligned_cols=76 Identities=53% Similarity=0.825 Sum_probs=73.0
Q ss_pred cchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCCCC
Q psy7483 155 SSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPLLD 225 (230)
Q Consensus 155 ~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~LLd 225 (230)
.+++++||+| +++|+||++||+||+|||||||+|+|++|||+.|.+.++.+|+++||++||++||||++|+
T Consensus 2 ~s~k~~LL~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~ll~ 81 (109)
T 1bkr_A 2 KSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLD 81 (109)
T ss_dssp CHHHHHHHHHHHHHTTTCTTCCCSSSSGGGTTSHHHHHHHHHHCGGGCCGGGCCTTCHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCcccccccHHHHHHHHHHCcCCCCHHHcCcCCHHHHHHHHHHHHHHHcCCCccCC
Confidence 4689999999 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q psy7483 226 VEDIH 230 (230)
Q Consensus 226 pEDmv 230 (230)
||||+
T Consensus 82 ~eDv~ 86 (109)
T 1bkr_A 82 PEDIS 86 (109)
T ss_dssp HHHHS
T ss_pred HHHcc
Confidence 99974
No 2
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=99.93 E-value=6.7e-27 Score=184.99 Aligned_cols=77 Identities=27% Similarity=0.597 Sum_probs=73.7
Q ss_pred ccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCCC
Q psy7483 154 ASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPLL 224 (230)
Q Consensus 154 ~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~LL 224 (230)
..++++.||+| +++|+||++||+||+|||||||+|+|++|||+.|.++++.+|+++||++||++|||+++|
T Consensus 5 ~~~~~~~LL~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~lL 84 (116)
T 1wyl_A 5 SSGTQEELLRWCQEQTAGYPGVHVSDLSSSWADGLALCALVYRLQPGLLEPSELQGLGALEATAWALKVAENELGITPVV 84 (116)
T ss_dssp CSSSHHHHHHHHHHHHHHSTTCCCSCTTTTTTSSHHHHHHHHHHCTTSCCCSSGGGCCHHHHHHHHHHHHHHTTCCCCCS
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCCCCHHHhccCCHHHHHHHHHHHHHHHcCCcccc
Confidence 35789999999 689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q psy7483 225 DVEDIH 230 (230)
Q Consensus 225 dpEDmv 230 (230)
+||||+
T Consensus 85 ~peD~~ 90 (116)
T 1wyl_A 85 SAQAVV 90 (116)
T ss_dssp CHHHHH
T ss_pred CHHHHh
Confidence 999984
No 3
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=99.93 E-value=1.6e-26 Score=185.71 Aligned_cols=78 Identities=44% Similarity=0.778 Sum_probs=74.5
Q ss_pred CccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCC
Q psy7483 153 SASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPL 223 (230)
Q Consensus 153 ~~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~L 223 (230)
.+.+++++||+| +++|+||++||+||+|||||||+|+|++|||+.|...++.+|+++||++||++||||++
T Consensus 4 ~~~s~k~~LL~W~q~~~~~y~~v~V~nFs~sw~DG~Af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~Lgi~~l 83 (127)
T 1wyq_A 4 GSSGAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQNAFNLAEKELGLTKL 83 (127)
T ss_dssp SCCCSTHHHHHHHHHHHHTSSSCCCSCSSTTSSSSHHHHHHHHHHCTTTCCTTTSCSSCCHHHHHHHHHHHHHTTCCCCC
T ss_pred CcCCHHHHHHHHHHHHHhcCCCCCCCCCcccccccHHHHHHHHHHCcCcCCHHHhCcCCHHHHHHHHHHHHHHHcCCCcc
Confidence 346889999999 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q psy7483 224 LDVEDIH 230 (230)
Q Consensus 224 LdpEDmv 230 (230)
|+||||+
T Consensus 84 l~~eDv~ 90 (127)
T 1wyq_A 84 LDPEDVN 90 (127)
T ss_dssp SCTTTSC
T ss_pred cCHHHhc
Confidence 9999984
No 4
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=99.92 E-value=2.6e-26 Score=184.90 Aligned_cols=77 Identities=60% Similarity=1.085 Sum_probs=73.9
Q ss_pred ccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCCC
Q psy7483 154 ASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPLL 224 (230)
Q Consensus 154 ~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~LL 224 (230)
..++++.||+| +++|+||++||+||+|||||||+|+|++|||+.|.+.++.+|+++||++||++|||+++|
T Consensus 5 ~~~~k~~LL~W~q~~~~~y~~v~V~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgip~lL 84 (128)
T 2d87_A 5 SSGIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADCPQLL 84 (128)
T ss_dssp SCCHHHHHHHHHHHHSSSCTTCCCSCTTTTTTSSHHHHHHHHHHCTTTSCSTTSCSSCHHHHHHHHHHHHHHHHCCCCCS
T ss_pred cCCHHHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcCCHHHcCccCHHHHHHHHHHHHHHcCCCCccc
Confidence 46899999999 689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q psy7483 225 DVEDIH 230 (230)
Q Consensus 225 dpEDmv 230 (230)
+||||+
T Consensus 85 ~peD~v 90 (128)
T 2d87_A 85 DTEDMV 90 (128)
T ss_dssp CHHHHH
T ss_pred CHHHHh
Confidence 999973
No 5
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=99.92 E-value=1.2e-26 Score=184.99 Aligned_cols=78 Identities=33% Similarity=0.751 Sum_probs=74.1
Q ss_pred CccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCC
Q psy7483 153 SASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPL 223 (230)
Q Consensus 153 ~~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~L 223 (230)
+..+.++.||+| +++|+||++||+||+|||||||+|+|++|||+.|.++++.+|+++||++||++|||+++
T Consensus 6 ~~~~~~~~LL~W~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~l 85 (121)
T 2d88_A 6 SGVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPI 85 (121)
T ss_dssp CSCSSSCHHHHHHHHHSTTSSSCCCCCSSHHHHTSHHHHHHHHHHCTTTSCTTTSCTTCHHHHHHHHHHHHHHHTCCCCS
T ss_pred cccCHHHHHHHHHHHHhccCCCCCCCCchhhccccHHHHHHHHHhCcCcCCHHHcCccCHHHHHHHHHHHHHHHcCCCCc
Confidence 456788999999 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q psy7483 224 LDVEDIH 230 (230)
Q Consensus 224 LdpEDmv 230 (230)
|+||||+
T Consensus 86 L~peD~~ 92 (121)
T 2d88_A 86 MTGKEMA 92 (121)
T ss_dssp SCHHHHH
T ss_pred CCHHHHh
Confidence 9999984
No 6
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=99.92 E-value=1.6e-26 Score=183.55 Aligned_cols=76 Identities=37% Similarity=0.650 Sum_probs=73.2
Q ss_pred ccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCCC
Q psy7483 154 ASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPLL 224 (230)
Q Consensus 154 ~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~LL 224 (230)
+.+++++||+| +++|+||++||+||+|||||||+|+|++|||+.|.+.++.+|+++||++||++|||+++|
T Consensus 6 ~~~~~~~LL~W~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~ll 85 (118)
T 1bhd_A 6 QTNSEKILLSWVRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKMSPIERLEHAFSKAQTYLGIEKLL 85 (118)
T ss_dssp CSHHHHHHHHHHHHHHTTSTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHHSCHHHHHHHHHHHHHHHHCCCCCS
T ss_pred cCCHHHHHHHHHHHHhccCCCCCCCCCcccccCcHHHHHHHHHHCcCcCCHHHhCcCCHHHHHHHHHHHHHHHcCCCccc
Confidence 46789999999 689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q psy7483 225 DVEDI 229 (230)
Q Consensus 225 dpEDm 229 (230)
+||||
T Consensus 86 ~~eDv 90 (118)
T 1bhd_A 86 DPEDV 90 (118)
T ss_dssp CHHHH
T ss_pred CHHHh
Confidence 99997
No 7
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=1.6e-25 Score=177.71 Aligned_cols=77 Identities=35% Similarity=0.744 Sum_probs=73.0
Q ss_pred CccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCC
Q psy7483 153 SASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPL 223 (230)
Q Consensus 153 ~~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~L 223 (230)
.+.++++.||+| +++|+||++||+||+|||||||+|+|++|||+.|.+++..+|+++||++| ++|||+++
T Consensus 6 ~~~~~~~~LL~W~~~~~~~y~~v~v~nFs~sw~dG~af~aLi~~~~P~lid~~~l~~~~~~~n~~~af~~a-~~LGi~~l 84 (119)
T 2d89_A 6 SGPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKKAYDGF-ASIGISRL 84 (119)
T ss_dssp SCCCCHHHHHHHHHHHTTTCSSCCCCCSSHHHHTTHHHHHHHHHHCTTTSCGGGCCTTCSHHHHHHHHHHH-HHHTCCCC
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcCChhhhcccCHHHHHHHHHHHH-HHhCCCcc
Confidence 457899999999 68999999999999999999999999999999999999999999999999 68999999
Q ss_pred CCCCCCC
Q psy7483 224 LDVEDIH 230 (230)
Q Consensus 224 LdpEDmv 230 (230)
|+||||+
T Consensus 85 l~peDi~ 91 (119)
T 2d89_A 85 LEPSDMV 91 (119)
T ss_dssp SCHHHHH
T ss_pred cCHHHHh
Confidence 9999984
No 8
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=99.83 E-value=2.8e-21 Score=168.10 Aligned_cols=78 Identities=28% Similarity=0.506 Sum_probs=74.3
Q ss_pred CccchhHhhhcC------cccccCCCCCCccchhhhHHHHhhCCCCC-CcCccCccCHHHHHHHHHHHHHHhCCCCCCCC
Q psy7483 153 SASSIKDRMLSW------NVQIDNFSTSWNDGMAFCALIHHFYPHAF-DFDKLSPQQRRHNFELAFRVAEEEADLMPLLD 225 (230)
Q Consensus 153 ~~~saK~aLL~W------~v~ItNFSsSWrDG~ALCALIH~~rPdLI-DydsL~~~~~~eNlelAFdvAE~eLGIp~LLd 225 (230)
.+.++++.||+| ++.|+||++||+||+|||||||+|+|+++ ||+.+.+.++.+|+++||++||+++|||++|+
T Consensus 140 ~~~~~~~~LL~W~~~~~~~~~v~nFs~s~~dG~a~~aLi~~~~P~~i~~~~~l~~~~~~~n~~~a~~~A~~~lGi~~~l~ 219 (245)
T 2wa7_A 140 KKQTPKQRLLGWIQNKIPYLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWDPQKPVDNAREAVQQADDWLGVPQVIT 219 (245)
T ss_dssp CCCCHHHHHHHHHHHHSTTSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCHHHHHHHHHHHHHHHSCCCCSSC
T ss_pred ccccHHHHHHHHHHHhCCCCCCCCCcccchhhHHHHHHHHHHCccccccccccCcccHHHHHHHHHHHHHHhCCCCccCC
Confidence 346789999999 79999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCCCC
Q psy7483 226 VEDIH 230 (230)
Q Consensus 226 pEDmv 230 (230)
||||+
T Consensus 220 peDi~ 224 (245)
T 2wa7_A 220 PEEII 224 (245)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99985
No 9
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=99.83 E-value=2.2e-21 Score=177.30 Aligned_cols=78 Identities=28% Similarity=0.512 Sum_probs=74.5
Q ss_pred CccchhHhhhcC------cccccCCCCCCccchhhhHHHHhhCCCCC-CcCccCccCHHHHHHHHHHHHHHhCCCCCCCC
Q psy7483 153 SASSIKDRMLSW------NVQIDNFSTSWNDGMAFCALIHHFYPHAF-DFDKLSPQQRRHNFELAFRVAEEEADLMPLLD 225 (230)
Q Consensus 153 ~~~saK~aLL~W------~v~ItNFSsSWrDG~ALCALIH~~rPdLI-DydsL~~~~~~eNlelAFdvAE~eLGIp~LLd 225 (230)
.+.++++.||+| ++.|+||++||+||+|||||||+|+|++| ||+.+++.++.+|+++||++||++||||++|+
T Consensus 137 ~~~~~k~~LL~W~~~~~~~~~v~nF~~sw~DG~af~aLi~~~~P~~~~d~~~l~~~~~~~n~~~Af~~Ae~~lGip~ll~ 216 (347)
T 4b7l_A 137 KKQTPKQRLLGWIQNKIPYLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWDPQKPVDNAREAMQQADDWLGVPQVIT 216 (347)
T ss_dssp CCCCHHHHHHHHHHHHCTTSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCHHHHHHHHHHHHHHHHCCCCSSC
T ss_pred hhhhHHHHHHHHHHhhCCCcccCCCCCCccchHHHHHHHHHhCCccccchhhcCcCCHHHHHHHHHHHHHHhcCCCcccC
Confidence 346789999999 89999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCCCC
Q psy7483 226 VEDIH 230 (230)
Q Consensus 226 pEDmv 230 (230)
||||+
T Consensus 217 peDi~ 221 (347)
T 4b7l_A 217 PEEII 221 (347)
T ss_dssp HHHHT
T ss_pred HHHcC
Confidence 99985
No 10
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=99.83 E-value=2.2e-21 Score=173.00 Aligned_cols=77 Identities=27% Similarity=0.480 Sum_probs=73.5
Q ss_pred ccchhHhhhcC------cccccCCCCCCccchhhhHHHHhhCCCCC-CcCccCccCHHHHHHHHHHHHHHhCCCCCCCCC
Q psy7483 154 ASSIKDRMLSW------NVQIDNFSTSWNDGMAFCALIHHFYPHAF-DFDKLSPQQRRHNFELAFRVAEEEADLMPLLDV 226 (230)
Q Consensus 154 ~~saK~aLL~W------~v~ItNFSsSWrDG~ALCALIH~~rPdLI-DydsL~~~~~~eNlelAFdvAE~eLGIp~LLdp 226 (230)
+.++++.||+| ++.|+||++||+||+|||||||+|+|++| ||+.+.+.++.+|+++||++||++||||++|+|
T Consensus 168 ~~s~k~~LL~W~n~~~~~~~I~nFs~sw~DG~af~aLi~~~~P~li~d~~~l~~~~~~~n~~~Af~~Ae~~lGi~~ll~p 247 (272)
T 3hoc_A 168 KQTPKQRLLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITP 247 (272)
T ss_dssp -CCHHHHHHHHHHHHCTTSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCHHHHHHHHHHHHHHHHCCCCSSCH
T ss_pred ccCHHHHHHHHHHhhCCCCCCCChhhcccchHHHHHHHHHhCcccccchhhcCccCHHHHHHHHHHHHHHhCCCCccCCH
Confidence 46789999999 79999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CCCC
Q psy7483 227 EDIH 230 (230)
Q Consensus 227 EDmv 230 (230)
|||+
T Consensus 248 eDiv 251 (272)
T 3hoc_A 248 EEIV 251 (272)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9985
No 11
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=99.83 E-value=2e-21 Score=170.24 Aligned_cols=77 Identities=45% Similarity=0.792 Sum_probs=73.5
Q ss_pred ccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCCC
Q psy7483 154 ASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPLL 224 (230)
Q Consensus 154 ~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~LL 224 (230)
..++++.||+| ++.|+||++||+||+|||||||+|+|++|||+.+.+.++.+|+++||++|+++||||++|
T Consensus 138 ~~~~~~~LL~W~~~~~~~y~~v~v~nFs~s~~DG~a~~aLi~~~~P~~id~~~l~~~~~~~n~~~a~~~A~~~lGi~~~l 217 (254)
T 1wku_A 138 ETSAKEGLLLWCQRKTAPYRNVNVQNFHTSWKDGLALCALIHRHRPDLIDYAKLRKDDPIGNLNTAFEVAEKYLDIPKML 217 (254)
T ss_dssp TEEHHHHHHHHHHHHHTTCTTCCCCSSSGGGTTSHHHHHHHHHHCTTSCCGGGCCTTCHHHHHHHHHHHHHHHSCCCCCS
T ss_pred cccHHHHHHHHHHHHccCCCCCcCCCCccchhhHHHHHHHHHHHCCCcccccccCcCCHHHHHHHHHHHHHHHcCCCCcC
Confidence 56789999999 588999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q psy7483 225 DVEDIH 230 (230)
Q Consensus 225 dpEDmv 230 (230)
+||||+
T Consensus 218 ~peDiv 223 (254)
T 1wku_A 218 DAEDIV 223 (254)
T ss_dssp CHHHHH
T ss_pred CHHHHh
Confidence 999973
No 12
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=99.81 E-value=4.4e-21 Score=173.06 Aligned_cols=77 Identities=38% Similarity=0.690 Sum_probs=73.6
Q ss_pred ccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCCC
Q psy7483 154 ASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPLL 224 (230)
Q Consensus 154 ~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~LL 224 (230)
..+++++||+| ++.|+||++||+||+|||||||+|+|++|||+.+.+.+..+|+++||++||++|||+++|
T Consensus 187 ~~s~k~~LL~W~n~~~~~y~~v~I~nFs~sw~DG~af~aLI~~~~P~lid~~~l~~~~~~~N~~~Af~~Ae~~LGi~~ll 266 (296)
T 3f7p_A 187 DMTAKEKLLLWSQRMVEGYQGLRCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLL 266 (296)
T ss_dssp TSCHHHHHHHHHHHHTTTSTTCCCCCSSGGGTTSHHHHHHHHHHCGGGCCHHHHTTSCHHHHHHHHHHHHHHHHCCCCCC
T ss_pred cCCHHHHHHHHHHHHhcCCCCCcCCCccccccccHHHHHHHHHHCcCccCHHHcCcccHHHHHHHHHHHHHHhCCCCccC
Confidence 46789999999 689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q psy7483 225 DVEDIH 230 (230)
Q Consensus 225 dpEDmv 230 (230)
+||||+
T Consensus 267 ~pEDi~ 272 (296)
T 3f7p_A 267 DPEDVD 272 (296)
T ss_dssp CHHHHS
T ss_pred CHHHhc
Confidence 999974
No 13
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=99.80 E-value=9.5e-21 Score=164.03 Aligned_cols=77 Identities=39% Similarity=0.697 Sum_probs=73.0
Q ss_pred ccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCCC
Q psy7483 154 ASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPLL 224 (230)
Q Consensus 154 ~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~LL 224 (230)
..++++.||+| ++.|+||++||+||+|||||||+|+|++|||+.+.+.+..+|+++||++|+++|||+++|
T Consensus 131 ~~~~~~~LL~W~~~~~~~~~~~~v~nF~~s~~DG~a~~aLi~~~~P~~i~~~~l~~~~~~~n~~~a~~~a~~~lGi~~~l 210 (245)
T 1sh5_A 131 DMTAKEKLLLWSQRMVEGYQGLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLL 210 (245)
T ss_dssp SCCHHHHHHHHHHHHTTTSTTCCCCCSSGGGTTSHHHHHHHHTTCTTTCCHHHHHHSCHHHHHHHHHHHHHHHHCCCCCC
T ss_pred cCCHHHHHHHHHHHHhccCCCcccCCccccccchHHHHHHHHHHCCCCCCHHHcccCCHHHHHHHHHHHHHHhCCCCccC
Confidence 35788999999 688999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q psy7483 225 DVEDIH 230 (230)
Q Consensus 225 dpEDmv 230 (230)
+||||+
T Consensus 211 ~peDi~ 216 (245)
T 1sh5_A 211 DPEDVD 216 (245)
T ss_dssp CHHHHS
T ss_pred CHHHhc
Confidence 999974
No 14
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=99.78 E-value=4e-20 Score=160.70 Aligned_cols=76 Identities=38% Similarity=0.698 Sum_probs=71.5
Q ss_pred cchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccC-ccCHHHHHHHHHHHHHHhCCCCCCC
Q psy7483 155 SSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS-PQQRRHNFELAFRVAEEEADLMPLL 224 (230)
Q Consensus 155 ~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~-~~~~~eNlelAFdvAE~eLGIp~LL 224 (230)
.++++.||+| +++|+||++||+||+|||||||+|+|+++||+.+. +.+..+|++.||++|++++||+++|
T Consensus 134 ~~~~~~LL~W~~~~~~~~~~~~i~nFs~s~~DG~a~~aLi~~~~P~li~~~~~~~~~~~~~n~~~a~~~A~~~lGi~~~l 213 (246)
T 1dxx_A 134 TNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVSQQSATQRLEHAFNIARYQLGIEKLL 213 (246)
T ss_dssp CCHHHHHHHHHHHHHTTCTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHTCCCHHHHHHHHHHHHHHTTCCCCCC
T ss_pred ccHHHHHHHHHHHHhccCCCCCcCCCcccchhHHHHHHHHHHHCcCccchhhhcccCCHHHHHHHHHHHHHHhCCCCccC
Confidence 4578999999 68999999999999999999999999999999986 7899999999999999999999999
Q ss_pred CCCCCC
Q psy7483 225 DVEDIH 230 (230)
Q Consensus 225 dpEDmv 230 (230)
+||||+
T Consensus 214 ~peDi~ 219 (246)
T 1dxx_A 214 DPEDVD 219 (246)
T ss_dssp CHHHHS
T ss_pred CHHHhh
Confidence 999974
No 15
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=99.72 E-value=2.5e-18 Score=151.33 Aligned_cols=75 Identities=20% Similarity=0.363 Sum_probs=69.7
Q ss_pred cchhHhhhcC--------ccc-ccCCCCCCccchhhhHHHHhhCCC---------CCCcCccCccCHHHHHHHHHHHHHH
Q psy7483 155 SSIKDRMLSW--------NVQ-IDNFSTSWNDGMAFCALIHHFYPH---------AFDFDKLSPQQRRHNFELAFRVAEE 216 (230)
Q Consensus 155 ~saK~aLL~W--------~v~-ItNFSsSWrDG~ALCALIH~~rPd---------LIDydsL~~~~~~eNlelAFdvAE~ 216 (230)
.++++.||+| +.. |+||++||+||+|||||||+|+|+ ++||+.+.+.+..+|+++||++|+
T Consensus 167 ~s~~~~LL~W~n~~l~~~g~~~I~nF~~s~~DG~a~~aLi~~~~P~~~~~~~~~l~~~~~~~~~~~~~~n~~~a~~~A~- 245 (275)
T 1aoa_A 167 LSPEELLLRWANFHLENSGWQKINNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQAD- 245 (275)
T ss_dssp SCHHHHHHHHHHHHHHHTTCCCCSCSSTTTTTSHHHHHHHHHHSCCSCSSSCCCCCCCCTTTTCSSHHHHHHHHHHHHT-
T ss_pred cCHHHHHHHHHHHHHHhcCCCcchhhhhhhhhhHHHHHHHHHHCCCccccccccccccccCCCccCHHHHHHHHHHHHH-
Confidence 4678999999 333 999999999999999999999999 889999999999999999999998
Q ss_pred hCCCCCCCCCCCCC
Q psy7483 217 EADLMPLLDVEDIH 230 (230)
Q Consensus 217 eLGIp~LLdpEDmv 230 (230)
+|||+++|+||||+
T Consensus 246 ~lGi~~~l~peDi~ 259 (275)
T 1aoa_A 246 KLGCRQFVTPADVV 259 (275)
T ss_dssp TTTCCCSCCHHHHH
T ss_pred HcCCCCcCCHHHcC
Confidence 79999999999984
No 16
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.70 E-value=1.4e-18 Score=169.95 Aligned_cols=77 Identities=45% Similarity=0.801 Sum_probs=73.2
Q ss_pred ccchhHhhhcC---------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCCC
Q psy7483 154 ASSIKDRMLSW---------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPLL 224 (230)
Q Consensus 154 ~~saK~aLL~W---------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~LL 224 (230)
..++++.||+| ++.|+||++||+||+|||||||+|+|++|||+.+.+.++.+|+++||++|+++||||++|
T Consensus 119 ~~~~~~~ll~W~~~~~~~~~~~~v~nf~~s~~dg~~~~~li~~~~p~~~~~~~~~~~~~~~n~~~a~~~a~~~lg~~~~l 198 (863)
T 1sjj_A 119 ETSAKEGLLLWYQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKML 198 (863)
T ss_dssp CCCSTTTTHHHHHHHHTTSTTCCCCSSSGGGTTSHHHHHHHHTTCCSSSCSGGGGSCCCGGGCTHHHHHHHHHHCCCCSC
T ss_pred ccchHHHHHHHHHHhccCCCCCCCCCCccccccHHHHHHHHHHhCCCCcChhhCCCCCHHHHHHHHHHHHHHhCCCCCcc
Confidence 45778999999 588999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q psy7483 225 DVEDIH 230 (230)
Q Consensus 225 dpEDmv 230 (230)
+||||+
T Consensus 199 ~~ed~~ 204 (863)
T 1sjj_A 199 DAEDIV 204 (863)
T ss_dssp CHHHHT
T ss_pred CHHHHh
Confidence 999974
No 17
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.67 E-value=1.4e-17 Score=157.96 Aligned_cols=74 Identities=23% Similarity=0.333 Sum_probs=66.9
Q ss_pred cchhHhhhcC----------cccccCCC-CCCccchhhhHHHHhhCCCCCCcCccCcc----CHHHHHHHHHHHHHHhCC
Q psy7483 155 SSIKDRMLSW----------NVQIDNFS-TSWNDGMAFCALIHHFYPHAFDFDKLSPQ----QRRHNFELAFRVAEEEAD 219 (230)
Q Consensus 155 ~saK~aLL~W----------~v~ItNFS-sSWrDG~ALCALIH~~rPdLIDydsL~~~----~~~eNlelAFdvAE~eLG 219 (230)
.+.+ .||+| ++.|+||+ +||+||+|||||||+|+|++|||+.+.+. ++.+|+++||++|+ +||
T Consensus 408 ~~~~-~LL~W~~~~~~~~~~~~~i~nF~~~s~~dG~a~~aLi~~~~P~~i~~~~l~~~~~~~~~~~n~~~af~~A~-~lG 485 (513)
T 1rt8_A 408 LSDS-DMVAWANSMAAKGGKGSQIRSFRDPSISTGVFVLDVLHGIKSEYVDYNLVTDGSTEELAIQNARLAISIAR-KLG 485 (513)
T ss_dssp CCHH-HHHHHHHHHHTTTCSSCCCSSTTCGGGGGSHHHHHHHHHHCGGGCCGGGCCCCCSHHHHHHHHHHHHHHHH-HTT
T ss_pred CCHH-HHHHHHHHHhhccCCCCCCCCCCcccccchHHHHHHHHHhCCCcCCHHhhccccChhhHHHHHHHHHHHHH-HcC
Confidence 3454 49999 48899999 89999999999999999999999999764 79999999999997 699
Q ss_pred CCCCCCCCCCC
Q psy7483 220 LMPLLDVEDIH 230 (230)
Q Consensus 220 Ip~LLdpEDmv 230 (230)
||++|+||||+
T Consensus 486 i~~~l~peDi~ 496 (513)
T 1rt8_A 486 AVIFILPEDIV 496 (513)
T ss_dssp CCCCCCHHHHH
T ss_pred CCccCCHHHhc
Confidence 99999999974
No 18
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.66 E-value=2.9e-17 Score=155.80 Aligned_cols=75 Identities=20% Similarity=0.296 Sum_probs=70.9
Q ss_pred cchhHhhhcC----------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCCC
Q psy7483 155 SSIKDRMLSW----------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPLL 224 (230)
Q Consensus 155 ~saK~aLL~W----------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~LL 224 (230)
.++++.||+| .+.|+||++||+||+|||||||+|+|+++||+.+.+.+..+|+++||++|++ +||+++|
T Consensus 160 ~~~~~~LL~W~n~~l~~~g~~~~V~nFs~s~~DG~a~~aLl~~~~P~~i~~~~l~~~~~~~n~~~a~~~a~~-lgi~~~l 238 (513)
T 1rt8_A 160 LPPEKILLRWFNYHLKAANWPRTVSNFSKDVSDGENYTVLLNQLAPELCSRAPLQTTDVLQRAEQVLQNAEK-LDCRKYL 238 (513)
T ss_dssp SCHHHHHHHHHHHHHHHTTCSCCCSCSSGGGTTSHHHHHHHHHHCTTTCCSGGGGCCCHHHHHHHHHHHHHT-TTCCCSC
T ss_pred CCHHHHHHHHHHHHHHhcCCCcCcccchhhhhccHHHHHHHHHHCccccccCCCCccCHHHHHHHHHHHHHH-cCCCccC
Confidence 5689999999 2789999999999999999999999999999999999999999999999986 9999999
Q ss_pred CCCCCC
Q psy7483 225 DVEDIH 230 (230)
Q Consensus 225 dpEDmv 230 (230)
+||||+
T Consensus 239 ~peDi~ 244 (513)
T 1rt8_A 239 TPTAMV 244 (513)
T ss_dssp CHHHHH
T ss_pred CHHHhc
Confidence 999974
No 19
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.65 E-value=2.4e-17 Score=155.96 Aligned_cols=74 Identities=26% Similarity=0.427 Sum_probs=67.4
Q ss_pred chhHhhhcC----------cccccCCC-CCCccchhhhHHHHhhCCCCCCcCccCcc----CHHHHHHHHHHHHHHhCCC
Q psy7483 156 SIKDRMLSW----------NVQIDNFS-TSWNDGMAFCALIHHFYPHAFDFDKLSPQ----QRRHNFELAFRVAEEEADL 220 (230)
Q Consensus 156 saK~aLL~W----------~v~ItNFS-sSWrDG~ALCALIH~~rPdLIDydsL~~~----~~~eNlelAFdvAE~eLGI 220 (230)
..++.||.| ++.|+||+ +||+||+|||||||+|+|++|||+.+.+. +..+|+++||++|+ ++||
T Consensus 397 ~~~~~LL~W~~~~~~~~~~~~~i~nF~d~s~~dG~a~~aLi~~~~P~li~~~~l~~~~s~~~~~~N~~~a~~~a~-~lGi 475 (506)
T 1pxy_A 397 MTDADILSWANRKVRTMGRKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLVTKGETDDEKRLNATYIVSVAR-KLGC 475 (506)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCCCSSTTCGGGGGCHHHHHHHHHHCGGGCCTTSCCCSCSHHHHHHHHHHHHHHHH-HHTC
T ss_pred ccHHHHHHHHHHHhhhcCCccccCCCCcccccchHHHHHHHHhhCCCeeehhhcccCCCchhHHHHHHHHHHHHH-HcCC
Confidence 356899999 48899999 89999999999999999999999999863 67899999999996 7999
Q ss_pred CCCCCCCCCC
Q psy7483 221 MPLLDVEDIH 230 (230)
Q Consensus 221 p~LLdpEDmv 230 (230)
|++|+||||+
T Consensus 476 ~~~l~peDi~ 485 (506)
T 1pxy_A 476 SVFLLPEDIV 485 (506)
T ss_dssp CCCCCHHHHH
T ss_pred CCcCCHHHcc
Confidence 9999999974
No 20
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=99.63 E-value=1e-16 Score=129.40 Aligned_cols=74 Identities=20% Similarity=0.387 Sum_probs=67.5
Q ss_pred chhHhhhcC----------cccccCCC-CCCccchhhhHHHHhhCCCCCCcC-----ccCccCHHHHHHHHHHHHHHhCC
Q psy7483 156 SIKDRMLSW----------NVQIDNFS-TSWNDGMAFCALIHHFYPHAFDFD-----KLSPQQRRHNFELAFRVAEEEAD 219 (230)
Q Consensus 156 saK~aLL~W----------~v~ItNFS-sSWrDG~ALCALIH~~rPdLIDyd-----sL~~~~~~eNlelAFdvAE~eLG 219 (230)
...+.||+| .+.|+||+ +||+||++||+|||.++|+.|||+ .|...+..+|.++||++|+ ++|
T Consensus 7 i~d~~ll~W~N~kl~~~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~~~L~~~d~~~Na~~ais~Ar-klG 85 (124)
T 1wjo_A 7 GNDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMAR-RIG 85 (124)
T ss_dssp SCCHHHHHHHHHHHHHHTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHHHH-HTC
T ss_pred cCHHHHHHHHHHHHHhcCCCcccCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcCCCCCHHHHHHHHHHHHHHHH-HcC
Confidence 356889999 36899999 999999999999999999999999 5677889999999999995 799
Q ss_pred CCCCCCCCCCC
Q psy7483 220 LMPLLDVEDIH 230 (230)
Q Consensus 220 Ip~LLdpEDmv 230 (230)
|+.+|.||||+
T Consensus 86 ~~~~l~pEDIv 96 (124)
T 1wjo_A 86 ARVYALPEDLV 96 (124)
T ss_dssp CSCCCCHHHHH
T ss_pred CCcccCHHHHh
Confidence 99999999984
No 21
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.62 E-value=1.3e-16 Score=150.97 Aligned_cols=75 Identities=24% Similarity=0.369 Sum_probs=70.7
Q ss_pred cchhHhhhcC----------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccCHHHHHHHHHHHHHHhCCCCCCC
Q psy7483 155 SSIKDRMLSW----------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQRRHNFELAFRVAEEEADLMPLL 224 (230)
Q Consensus 155 ~saK~aLL~W----------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~~~eNlelAFdvAE~eLGIp~LL 224 (230)
.++++.||+| ++.|+||++||+||+|||||||+|+|+++||+.+.+.+..+|+++||++|+ ++||+++|
T Consensus 151 ~~~~~~LL~W~n~~l~~~g~~~~v~nFs~s~~DG~a~~~Ll~~~~P~~i~~~~l~~~~~~~n~~~a~~~a~-~lGi~~~l 229 (506)
T 1pxy_A 151 LPPEKVLLKWMNFHLKKGGYKKTVSNFSADLKDAQAYAFLLNVLAPEHCDPATLDAKDPLERAELVLSHAE-RMNCKRYL 229 (506)
T ss_dssp SCHHHHHHHHHHHHHHHTTCCSCCCCSSTTTTTSHHHHHHHHHHCGGGCCGGGGGCCSHHHHHHHHHHHHH-HTTCCCCC
T ss_pred CCHHHHHHHHHHHHHHhcCCCccCccccccccchHHHHHHHHHhCccccccccCCcCCHHHHHHHHHHHHH-HcCCCCcC
Confidence 5688999999 268999999999999999999999999999999999999999999999998 59999999
Q ss_pred CCCCCC
Q psy7483 225 DVEDIH 230 (230)
Q Consensus 225 dpEDmv 230 (230)
+||||+
T Consensus 230 ~peDi~ 235 (506)
T 1pxy_A 230 TAEEIV 235 (506)
T ss_dssp CHHHHH
T ss_pred CHHHHh
Confidence 999974
No 22
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=97.62 E-value=4.4e-05 Score=61.08 Aligned_cols=74 Identities=20% Similarity=0.345 Sum_probs=60.1
Q ss_pred chhHhhhcC--------cccccCCCCCCccchhhhHHHHhhCCCCCCcCcc-----CccCHHHHHHHHHHHHHHhCCCCC
Q psy7483 156 SIKDRMLSW--------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKL-----SPQQRRHNFELAFRVAEEEADLMP 222 (230)
Q Consensus 156 saK~aLL~W--------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL-----~~~~~~eNlelAFdvAE~eLGIp~ 222 (230)
..++++.+| ++.|+|+.++.+||..||.|+....|+.+++... ......+|+..|++.+++ .||.-
T Consensus 22 ~q~ktft~WiN~~L~~~~~~v~dL~~Dl~DGv~L~~Lle~ls~~~~~~~~~~~~p~~r~~kieNv~~aL~~lk~-~gi~l 100 (131)
T 2vzc_A 22 VVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQD-GGLEK 100 (131)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCCCTTTTTTTSHHHHHHHHHHTTCCCCTTSSCSSCCSHHHHHHHHHHHHHHHHH-TTCCC
T ss_pred HHHHHHHHHHHHHHHHcCCcccCHHHHcccHHHHHHHHHHhcCCCCCHHHhcCCCCcHHHHHHHHHHHHHHHHH-cCCCc
Confidence 346778889 7789999999999999999999999998875433 345788999999999974 78863
Q ss_pred -CCCCCCCC
Q psy7483 223 -LLDVEDIH 230 (230)
Q Consensus 223 -LLdpEDmv 230 (230)
-+.++||+
T Consensus 101 ~~I~~~DIv 109 (131)
T 2vzc_A 101 PKPRPEDIV 109 (131)
T ss_dssp CSSCHHHHH
T ss_pred CCCCHHHhh
Confidence 46777763
No 23
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.00 E-value=0.00022 Score=56.29 Aligned_cols=74 Identities=15% Similarity=0.238 Sum_probs=57.7
Q ss_pred cchhHhhhcC--------cc--cccCCCCCCccchhhhHHHHhhCCCCCC-cC--ccCccCHHHHHHHHHHHHHHhCCCC
Q psy7483 155 SSIKDRMLSW--------NV--QIDNFSTSWNDGMAFCALIHHFYPHAFD-FD--KLSPQQRRHNFELAFRVAEEEADLM 221 (230)
Q Consensus 155 ~saK~aLL~W--------~v--~ItNFSsSWrDG~ALCALIH~~rPdLID-yd--sL~~~~~~eNlelAFdvAE~eLGIp 221 (230)
...++.+.+| ++ .|.||..+.+||..||.|+....|+.++ +. ........+|+..|++.++ .+||.
T Consensus 17 ~~q~~~f~~WIN~~L~~~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~l~~~~~~p~~~~~~~eNv~~aL~~~~-~~gv~ 95 (129)
T 2yrn_A 17 EDQKRIYTDWANHYLAKSGHKRLIRDLQQDVTDGVLLAQIIQVVANEKIEDINGCPKNRSQMIENIDACLNFLA-AKGIN 95 (129)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCSCCSCHHHHSSSSHHHHHHHHHHTTCCCTTCCSSCCSTTHHHHHHHHHHHHHH-HHTCC
T ss_pred HHHHHHHHHHHHHHhcccCCCccchhHHHHcccHHHHHHHHHHHhcCCcccccCCCCcHHHHHHHHHHHHHHHH-HhCCc
Confidence 3456789999 33 4899999999999999999999999885 21 2234567899999999996 57887
Q ss_pred C-CCCCCCC
Q psy7483 222 P-LLDVEDI 229 (230)
Q Consensus 222 ~-LLdpEDm 229 (230)
. -+.++|+
T Consensus 96 ~~~i~~~DI 104 (129)
T 2yrn_A 96 IQGLSAEEI 104 (129)
T ss_dssp CTTCCHHHH
T ss_pred ccCCChhhh
Confidence 4 3567665
No 24
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.79 E-value=0.00092 Score=55.92 Aligned_cols=73 Identities=18% Similarity=0.455 Sum_probs=54.4
Q ss_pred chhHhhhcC-----cccccCCCCCCccchhhhHHHHhhCCCCCCcCccC-----ccCHHHHHHHHHHHHHHhCCCCCCCC
Q psy7483 156 SIKDRMLSW-----NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS-----PQQRRHNFELAFRVAEEEADLMPLLD 225 (230)
Q Consensus 156 saK~aLL~W-----~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~-----~~~~~eNlelAFdvAE~eLGIp~LLd 225 (230)
..+..||.| +.+++-. ..-.||-++|-|++...|+.|.+..+. +-+-.+|++.--+.. +++||++.++
T Consensus 22 ~sr~ElL~WIN~~L~~~~~ki-E~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~e~e~~~N~k~lQ~af-~k~gV~k~ip 99 (159)
T 1wyo_A 22 LSRHDMLAWVNDSLHLNYTKI-EQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAF-KKMGVDKIIP 99 (159)
T ss_dssp CCHHHHHHHHHHHSCCCCSSG-GGGGGCHHHHHHHHHHSTTSSCTTSCCTTCCSSHHHHHHHHHHHHHH-HHHTCCCCCC
T ss_pred hhHHHHHHHHHHHHCCCCchh-hhcCccHHHHHHHHHHccCCCcHhhhccCCCChHHHHHHHHHHHHHH-HHcCCCCccC
Confidence 356789999 4444333 347999999999999999998755544 556677777755555 5899999998
Q ss_pred CCCCC
Q psy7483 226 VEDIH 230 (230)
Q Consensus 226 pEDmv 230 (230)
.+.++
T Consensus 100 V~kLv 104 (159)
T 1wyo_A 100 VEKLV 104 (159)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 87654
No 25
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=96.76 E-value=0.00088 Score=58.34 Aligned_cols=73 Identities=14% Similarity=0.270 Sum_probs=57.7
Q ss_pred chhHhhhcC--------cccccCCCCCCccchhhhHHHHhhCCCCCCcC--ccCccCHHHHHHHHHHHHHHhCCCCCC-C
Q psy7483 156 SIKDRMLSW--------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFD--KLSPQQRRHNFELAFRVAEEEADLMPL-L 224 (230)
Q Consensus 156 saK~aLL~W--------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDyd--sL~~~~~~eNlelAFdvAE~eLGIp~L-L 224 (230)
..++.+.+| +..|.||-.+.+||..||.|+....|+.++.- ........+|+..|++.++ ..||... +
T Consensus 27 ~q~~~f~~WiN~~L~~~~~~v~~l~~dl~DGv~L~~Lle~l~~~~v~k~~~~~~~~~~~eNi~~aL~~~k-~~gv~lv~I 105 (254)
T 1wku_A 27 QQRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPRPDKGKMRFHKIANVNKALDFIA-SKGVKLVSI 105 (254)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCSCCCCCCSCCSHHHHHHHHHHHHHHHH-TTTCCCCSC
T ss_pred HHHHHHHHHHHHHccccCCCccCHHHHccCHHHHHHHHHHhCcCCCCCCCCCccHHHHHHhHHHHHHHHH-HcCCCccCC
Confidence 456788999 57799999999999999999999999988531 1234567899999999996 5888743 5
Q ss_pred CCCCC
Q psy7483 225 DVEDI 229 (230)
Q Consensus 225 dpEDm 229 (230)
.++|+
T Consensus 106 ~~~DI 110 (254)
T 1wku_A 106 GAEEI 110 (254)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 66664
No 26
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=96.65 E-value=0.0014 Score=58.14 Aligned_cols=73 Identities=19% Similarity=0.347 Sum_probs=57.4
Q ss_pred cchhHhhhcC--------cccccCCCCCCccchhhhHHHHhhCCCCCCcCcc-----CccCHHHHHHHHHHHHHHhCCCC
Q psy7483 155 SSIKDRMLSW--------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKL-----SPQQRRHNFELAFRVAEEEADLM 221 (230)
Q Consensus 155 ~saK~aLL~W--------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL-----~~~~~~eNlelAFdvAE~eLGIp 221 (230)
...++.+.+| +..|+|+-.+++||+.||.|+....|+.+ +..+ ......+|+..|++.++ ..||.
T Consensus 46 ~vQkktft~WiN~~L~~~~~~V~dL~~DL~DGv~L~~Lle~Ls~~~l-~~~~~~~p~~r~~kleNv~~aL~~lk-~~gv~ 123 (272)
T 3hoc_A 46 KIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKM-HRKHNQRPTFRQMQLENVSVALEFLD-RESIK 123 (272)
T ss_dssp GHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTSCC-SSCCCSSCCSHHHHHHHHHHHHHHHH-HTTCC
T ss_pred HHHHHHHHHHHHHHhccCCCCcccHHHHHhhHHHHHHHHHHHcCCcc-ccccCCCCccHHHHHHHHHHHHHHHH-HcCCc
Confidence 4566789999 67899999999999999999999988776 2222 12346899999999997 68887
Q ss_pred CC-CCCCCC
Q psy7483 222 PL-LDVEDI 229 (230)
Q Consensus 222 ~L-LdpEDm 229 (230)
-. +.++||
T Consensus 124 lvnI~~~DI 132 (272)
T 3hoc_A 124 LVSIDSKAI 132 (272)
T ss_dssp CSSCCHHHH
T ss_pred ccccccchh
Confidence 43 666665
No 27
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=96.62 E-value=0.0013 Score=56.87 Aligned_cols=74 Identities=20% Similarity=0.350 Sum_probs=56.7
Q ss_pred ccchhHhhhcC--------cccccCCCCCCccchhhhHHHHhhCCCCCCcCcc-----CccCHHHHHHHHHHHHHHhCCC
Q psy7483 154 ASSIKDRMLSW--------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKL-----SPQQRRHNFELAFRVAEEEADL 220 (230)
Q Consensus 154 ~~saK~aLL~W--------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL-----~~~~~~eNlelAFdvAE~eLGI 220 (230)
....++.+.+| +..|.||-.+++||..||.|+....|+.+. ..+ ......+|+..|++.++ ..||
T Consensus 18 ~~~q~~~f~~WiN~~L~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~~~-~~~n~~~~~~~~~~eNv~~aL~~~k-~~g~ 95 (245)
T 2wa7_A 18 KKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMY-RKYHQRPTFRQMQLENVSVALEFLD-RESI 95 (245)
T ss_dssp GGHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCS-SCCCSSCCSHHHHHHHHHHHHHHHH-HTTC
T ss_pred HHHHHHHHHHHHHHhccccCCCccCHHHHcccHHHHHHHHHHHcCCCCc-hhcCCCCCcHHHHHHHHHHHHHHHH-HcCC
Confidence 34567889999 567899999999999999999999888662 222 12347899999999996 5788
Q ss_pred CCC-CCCCCC
Q psy7483 221 MPL-LDVEDI 229 (230)
Q Consensus 221 p~L-LdpEDm 229 (230)
.-. +.++|+
T Consensus 96 ~lv~I~~~DI 105 (245)
T 2wa7_A 96 KLVSIDSKAI 105 (245)
T ss_dssp CCCSCCHHHH
T ss_pred cccCCCHHHh
Confidence 743 456654
No 28
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=96.62 E-value=0.0012 Score=59.37 Aligned_cols=73 Identities=15% Similarity=0.261 Sum_probs=57.8
Q ss_pred chhHhhhcC--------cccccCCCCCCccchhhhHHHHhhCCCCCCcCc-cCccCHHHHHHHHHHHHHHhCCCCC-CCC
Q psy7483 156 SIKDRMLSW--------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDK-LSPQQRRHNFELAFRVAEEEADLMP-LLD 225 (230)
Q Consensus 156 saK~aLL~W--------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDyds-L~~~~~~eNlelAFdvAE~eLGIp~-LLd 225 (230)
..++.+.+| +..|.||-.+.+||..||.|+....|+.++... .......+|+..|+++++ ..||.- -+.
T Consensus 73 vQkktft~WINs~L~~~~~~V~dL~~DL~DGvvL~~Lle~L~~~~l~~~~~~~r~~kleNvn~aL~~lk-~~gv~lv~I~ 151 (296)
T 3f7p_A 73 VQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMRFHKLQNVQIALDYLR-HRQVKLVNIR 151 (296)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHH-HTTCCCTTCC
T ss_pred HHHHHHHHHHHHHcccCCCCcccHHHHHhhHHHHHHHHHHhcCCcccccCCcChhhhhhhHHHHHHHHH-HhCccccCCC
Confidence 356788999 567999999999999999999999999886432 223467899999999996 578763 256
Q ss_pred CCCC
Q psy7483 226 VEDI 229 (230)
Q Consensus 226 pEDm 229 (230)
++||
T Consensus 152 ~~DI 155 (296)
T 3f7p_A 152 NDDI 155 (296)
T ss_dssp HHHH
T ss_pred hhhh
Confidence 6664
No 29
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=96.54 E-value=0.0016 Score=52.16 Aligned_cols=73 Identities=15% Similarity=0.435 Sum_probs=53.2
Q ss_pred chhHhhhcC-----cccccCCCCCCccchhhhHHHHhhCCCCCCcCccC-----ccCHHHHHHHHHHHHHHhCCCCCCCC
Q psy7483 156 SIKDRMLSW-----NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS-----PQQRRHNFELAFRVAEEEADLMPLLD 225 (230)
Q Consensus 156 saK~aLL~W-----~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~-----~~~~~eNlelAFdvAE~eLGIp~LLd 225 (230)
..+..||.| +.+++-. ..-.||-|+|-|++...|+.|.+..+. +-+-.+|+..--+.. +++||++.++
T Consensus 5 ~sr~ElL~WIN~~L~~~~~ki-E~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~e~e~~~N~k~lq~af-~k~gV~k~i~ 82 (123)
T 2qjz_A 5 LSRHDMLAWINESLQLNLTKI-EQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGF-KRMGVDKIIP 82 (123)
T ss_dssp CCHHHHHHHHHHHHTCCCCCG-GGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHH-HHHTCCCCCC
T ss_pred ccHHHHHHHHHHHHCCCCchH-HHcCchHHHHHHHHHHccCCCcHHHhccCCCChHHHHHHHHHHHHHH-HHcCCCCccC
Confidence 356789999 4444333 347999999999999999999765554 344566776655544 5899999998
Q ss_pred CCCCC
Q psy7483 226 VEDIH 230 (230)
Q Consensus 226 pEDmv 230 (230)
.+.++
T Consensus 83 v~kLv 87 (123)
T 2qjz_A 83 VDKLV 87 (123)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 87653
No 30
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=96.19 E-value=0.0019 Score=52.33 Aligned_cols=72 Identities=14% Similarity=0.402 Sum_probs=53.1
Q ss_pred hhHhhhcC-----cccc-------cCCCCCCccchhhhHHHHhhCC---CCCC--cCc-cCccCHHHHHHHHHHHHHHhC
Q psy7483 157 IKDRMLSW-----NVQI-------DNFSTSWNDGMAFCALIHHFYP---HAFD--FDK-LSPQQRRHNFELAFRVAEEEA 218 (230)
Q Consensus 157 aK~aLL~W-----~v~I-------tNFSsSWrDG~ALCALIH~~rP---dLID--yds-L~~~~~~eNlelAFdvAE~eL 218 (230)
.++.+..| +..+ .+|-..-+||..||-|++.+.| +.|+ +.. -..-...+|+..-++.++ .+
T Consensus 10 ~e~e~~~WIe~~l~~~l~~~~~~~~~f~~~LkDGvvLCkL~N~l~P~~~~~I~~kin~~~~~f~~~eNI~~FL~ac~-~~ 88 (144)
T 1ujo_A 10 LEERLVEWIVVQCGPDVGRPDRGRLGFQVWLKNGVILSKLVNSLYPEGSKPVKVPENPPSMVFKQMEQVAQFLKAAE-DY 88 (144)
T ss_dssp HHHHHHHHHHHHHCTTTCCCCSSSSSHHHHTTSSHHHHHHHHHHSCTTTCCSCCCSSCCCSHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHhCCCCCCcCCcHHHHHHHHcchHHHHHHHHHhCcccCCCcceeecCCCchhHHHHHHHHHHHHHH-Hc
Confidence 45778889 4333 5788889999999999999999 7775 221 123457789999999995 69
Q ss_pred CCCC--CCCCCCC
Q psy7483 219 DLMP--LLDVEDI 229 (230)
Q Consensus 219 GIp~--LLdpEDm 229 (230)
|++. +.++.|+
T Consensus 89 Gv~~~~lF~t~DL 101 (144)
T 1ujo_A 89 GVIKTDMFQTVDL 101 (144)
T ss_dssp TCCSSSCCCHHHH
T ss_pred CcCccccCChhHH
Confidence 9996 4455443
No 31
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=96.08 E-value=0.0012 Score=50.86 Aligned_cols=71 Identities=20% Similarity=0.433 Sum_probs=52.1
Q ss_pred hHhhhcC-----ccc-ccCCCCCCccchhhhHHHHhhCCCCCCcC--ccCccCHHHHHHHHHHHHHHhCCCCC--CCCCC
Q psy7483 158 KDRMLSW-----NVQ-IDNFSTSWNDGMAFCALIHHFYPHAFDFD--KLSPQQRRHNFELAFRVAEEEADLMP--LLDVE 227 (230)
Q Consensus 158 K~aLL~W-----~v~-ItNFSsSWrDG~ALCALIH~~rPdLIDyd--sL~~~~~~eNlelAFdvAE~eLGIp~--LLdpE 227 (230)
++.+..| +.. -.+|-..-+||..||-|++.+.|+.++.- +...-...+|+..-++.++ ++|++. +.++.
T Consensus 5 e~e~~~WIe~~l~~~~~~~l~~~L~dGvvLCkL~N~l~P~~v~ki~~~~~~f~~~eNI~~Fl~a~~-~~Gv~~~~lF~~~ 83 (108)
T 1h67_A 5 ERQLRVWIEGATGRRIGDNFMDGLKDGVILCELINKLQPGSVQKVNDPVQNWHKLENIGNFLRAIK-HYGVKPHDIFEAN 83 (108)
T ss_dssp SHHHHHHHHHHHSCCCCSCHHHHHHHCSHHHHHHHHHSTTSSTTCCCTTSSHHHHHHHHHHHHHHH-HHTSCGGGSCCHH
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHHccHHHHHHHHHHhCCCCcccccccccchHHHHHHHHHHHHHH-HcCCCcccccChh
Confidence 3557778 333 25777888999999999999999998521 1123456899999999995 799996 45555
Q ss_pred CC
Q psy7483 228 DI 229 (230)
Q Consensus 228 Dm 229 (230)
|+
T Consensus 84 DL 85 (108)
T 1h67_A 84 DL 85 (108)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 32
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=96.05 E-value=0.0021 Score=56.26 Aligned_cols=74 Identities=23% Similarity=0.433 Sum_probs=57.4
Q ss_pred cchhHhhhcC------c-----------ccccCCCCCCccchhhhHHHHhhCCCCCCcCccC-----ccCHHHHHHHHHH
Q psy7483 155 SSIKDRMLSW------N-----------VQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS-----PQQRRHNFELAFR 212 (230)
Q Consensus 155 ~saK~aLL~W------~-----------v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~-----~~~~~eNlelAFd 212 (230)
...++.+.+| . ..|.||-.+++||..||.|+....|+.+++..+. .....+|+..|++
T Consensus 23 ~~q~~~f~~WiN~~L~~~~~~~~~~~i~~~v~dl~~dL~DGv~L~~Lle~l~~~~v~~~~i~~~~~~~~~~~eNv~~aL~ 102 (275)
T 1aoa_A 23 EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLALN 102 (275)
T ss_dssp HHHHHHHHHHHHHHTTTCTTSTTTCSCCTTTTHHHHHGGGSHHHHHHHHHHSTTSSCGGGSCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCccccccCCCCCccchHHHHhccHHHHHHHHHHhcCCCCCccccCCCCCCHHHHHHHHHHHHH
Confidence 3456889999 1 1368999999999999999999999988754443 2357899999999
Q ss_pred HHHHhCCCCCC-CCCCCC
Q psy7483 213 VAEEEADLMPL-LDVEDI 229 (230)
Q Consensus 213 vAE~eLGIp~L-LdpEDm 229 (230)
.++ ..||... +.++|+
T Consensus 103 ~~k-~~g~~l~~I~~~DI 119 (275)
T 1aoa_A 103 SAS-AIGCHVVNIGAEDL 119 (275)
T ss_dssp HHH-HTTCCCTTCCHHHH
T ss_pred HHH-HcCCcccCCCHHHH
Confidence 996 6788743 566664
No 33
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=95.96 E-value=0.004 Score=51.16 Aligned_cols=71 Identities=17% Similarity=0.330 Sum_probs=54.0
Q ss_pred hHhhhcC-----cccc---cCCCCCCccchhhhHHHHhhCCCCCC-c-C-ccCccCHHHHHHHHHHHHHHhCCCCC--CC
Q psy7483 158 KDRMLSW-----NVQI---DNFSTSWNDGMAFCALIHHFYPHAFD-F-D-KLSPQQRRHNFELAFRVAEEEADLMP--LL 224 (230)
Q Consensus 158 K~aLL~W-----~v~I---tNFSsSWrDG~ALCALIH~~rPdLID-y-d-sL~~~~~~eNlelAFdvAE~eLGIp~--LL 224 (230)
.+.+..| +..+ .||-..-+||..||-|++.+.|+.+. + . +...-...+|+..-+..++ .+|+|. +.
T Consensus 13 ~~e~~~WIe~~l~~~l~~~~~l~~~LkdGvvLCkL~N~l~P~~i~kI~~~~~~~f~~~eNI~~FL~a~~-~~Gv~~~~lF 91 (159)
T 1p2x_A 13 VDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKFLDFIH-GIGLPEIFHF 91 (159)
T ss_dssp HHHHHHHHHHHHTSCCCCGGGHHHHTTTSHHHHHHHHHHCTTSCCCCCCCSSCCTTHHHHHHHHHHHHH-HTTCCGGGCC
T ss_pred HHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCCCccccccccCCcchHHHHHHHHHHHHH-HcCCCccccc
Confidence 3667788 3333 47888899999999999999999883 1 1 3345678999999999996 899996 44
Q ss_pred CCCCC
Q psy7483 225 DVEDI 229 (230)
Q Consensus 225 dpEDm 229 (230)
++.|+
T Consensus 92 ~~~DL 96 (159)
T 1p2x_A 92 ELTDI 96 (159)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 55554
No 34
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=95.95 E-value=0.0035 Score=50.26 Aligned_cols=72 Identities=15% Similarity=0.397 Sum_probs=54.3
Q ss_pred hhHhhhcC-----ccc-ccCCCCCCccchhhhHHHHhhCCCCCCc--CccCccCHHHHHHHHHHHHHHhCCCCC--CCCC
Q psy7483 157 IKDRMLSW-----NVQ-IDNFSTSWNDGMAFCALIHHFYPHAFDF--DKLSPQQRRHNFELAFRVAEEEADLMP--LLDV 226 (230)
Q Consensus 157 aK~aLL~W-----~v~-ItNFSsSWrDG~ALCALIH~~rPdLIDy--dsL~~~~~~eNlelAFdvAE~eLGIp~--LLdp 226 (230)
.++.+..| +.. -.||-..-+||..||-|++.+.|+.+.- .+-..-...+|+..-++.++ .+|++. +.++
T Consensus 18 ~~~e~~~WIe~~l~~~~~~~l~~~L~DGvvLCkL~N~l~P~~v~ki~~~~~~f~~~eNI~~Fl~a~~-~~Gv~~~~lF~~ 96 (136)
T 1wyp_A 18 REQELREWIEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAIT-KYGVKPHDIFEA 96 (136)
T ss_dssp HHHHHHHHHHHHTCCCCCSCTTHHHHTSHHHHHHHHHHSTTSSSCCCCSSCSHHHHHHHHHHHHHHH-HHTCCGGGCCCH
T ss_pred HHHHHHHHHHHHhCCCCcHHHHHHHccHHhHHHHHHhhCCCCcccccccccchHHHHHHHHHHHHHH-HcCCCcccccCc
Confidence 34789999 333 3688888999999999999999998831 11123457899999999995 799996 4555
Q ss_pred CCC
Q psy7483 227 EDI 229 (230)
Q Consensus 227 EDm 229 (230)
.|+
T Consensus 97 ~DL 99 (136)
T 1wyp_A 97 NDL 99 (136)
T ss_dssp HHH
T ss_pred hHH
Confidence 553
No 35
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=95.68 E-value=0.0088 Score=58.56 Aligned_cols=75 Identities=15% Similarity=0.275 Sum_probs=59.5
Q ss_pred cchhHhhhcC--------cccccCCCCCCccchhhhHHHHhhCCCCCCcC--ccCccCHHHHHHHHHHHHHHhCCCCCC-
Q psy7483 155 SSIKDRMLSW--------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFD--KLSPQQRRHNFELAFRVAEEEADLMPL- 223 (230)
Q Consensus 155 ~saK~aLL~W--------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDyd--sL~~~~~~eNlelAFdvAE~eLGIp~L- 223 (230)
...++.+.+| +..|.||-.+.+||..||.|+....|+.++.- ........+|+..|++.++ ..||.-.
T Consensus 7 ~~q~~~f~~Win~~L~~~~~~v~~l~~dl~DG~~L~~l~e~l~~~~~~~~~~~~~~~~~~eN~~~~l~~~~-~~g~~~~~ 85 (863)
T 1sjj_A 7 KQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIA-SKGVKLVS 85 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCCCCCSSTTSSCHHHHHHHHHTSCCCCCCSCCCSSHHHHHHHHHHHHHHHH-HTTCCCTT
T ss_pred HHHHHHHHHHHHHHhccCCCCccCHHHHhcCHHHHHHHHHHhCCCceeCCCCCccHHHHHHHHHHHHHHHH-HcCCccCC
Confidence 3456788889 67899999999999999999999999988531 1234567899999999996 5788753
Q ss_pred CCCCCCC
Q psy7483 224 LDVEDIH 230 (230)
Q Consensus 224 LdpEDmv 230 (230)
+.++||+
T Consensus 86 i~~~di~ 92 (863)
T 1sjj_A 86 IGAEEIV 92 (863)
T ss_dssp CCSHHHH
T ss_pred CChHHhh
Confidence 6777753
No 36
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=95.67 E-value=0.0068 Score=52.20 Aligned_cols=74 Identities=18% Similarity=0.273 Sum_probs=56.2
Q ss_pred cchhHhhhcC--------cc-cccCCCCCCccchhhhHHHHhhCCCCCCcC-ccCccCHHHHHHHHHHHHHHhCCCCC-C
Q psy7483 155 SSIKDRMLSW--------NV-QIDNFSTSWNDGMAFCALIHHFYPHAFDFD-KLSPQQRRHNFELAFRVAEEEADLMP-L 223 (230)
Q Consensus 155 ~saK~aLL~W--------~v-~ItNFSsSWrDG~ALCALIH~~rPdLIDyd-sL~~~~~~eNlelAFdvAE~eLGIp~-L 223 (230)
...++.+.+| +. .|.||-.+.+||..||.|+....|..++.. ........+|+..|++.++ ..|+.- -
T Consensus 15 ~~q~~~f~~WiN~~L~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~eNv~~aL~~~k-~~g~~l~~ 93 (246)
T 1dxx_A 15 DVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQ-NNNVDLVN 93 (246)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCSCTTTTTTTSHHHHHHHHHHHSCCCCCCCCSSHHHHHHHHHHHHHHHH-HTTCCCTT
T ss_pred HHHHHHHHHHHHHhccccCCCCccCHHHHhCcHHHHHHHHHHHcCCcCCCCCCccHHHHHHHHHHHHHHHH-HcCCcccc
Confidence 4466889999 23 689999999999999999999988877532 2223567899999999996 578863 2
Q ss_pred CCCCCC
Q psy7483 224 LDVEDI 229 (230)
Q Consensus 224 LdpEDm 229 (230)
+.++|+
T Consensus 94 I~~~DI 99 (246)
T 1dxx_A 94 IGSTDI 99 (246)
T ss_dssp CCHHHH
T ss_pred CCHHHh
Confidence 455554
No 37
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=95.65 E-value=0.0057 Score=55.70 Aligned_cols=74 Identities=19% Similarity=0.292 Sum_probs=56.6
Q ss_pred cchhHhhhcC--------cccccCCCCCCccchhhhHHHHhhCCCCCCcCcc----CccCHHHHHHHHHHHHHHhCCCCC
Q psy7483 155 SSIKDRMLSW--------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKL----SPQQRRHNFELAFRVAEEEADLMP 222 (230)
Q Consensus 155 ~saK~aLL~W--------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL----~~~~~~eNlelAFdvAE~eLGIp~ 222 (230)
...++...+| +..|+|+-.+++||+.||.|+....++.++.... ......+|+..|++.++ ..||.-
T Consensus 16 ~iQ~ktFt~WiN~~L~~~~~~V~dL~~Dl~DG~~L~~Lle~ls~~~l~~~~~~~p~~r~~k~eNv~~al~~~~-~~g~~l 94 (347)
T 4b7l_A 16 KIQQNTFTRWCNEHLKSVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLD-RESIKL 94 (347)
T ss_dssp HHHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred HHHHHHHHHHHHHhhCcCCCCcCCHHHHhcCHHHHHHHHHHHcCCccChhhcCCcccHHHHHHHHHHHHHHHH-Hhcccc
Confidence 3456788889 6789999999999999999999999888753221 12346799999999996 567763
Q ss_pred -CCCCCCC
Q psy7483 223 -LLDVEDI 229 (230)
Q Consensus 223 -LLdpEDm 229 (230)
-+.++||
T Consensus 95 v~i~~~DI 102 (347)
T 4b7l_A 95 VSIDSKAI 102 (347)
T ss_dssp SSCCHHHH
T ss_pred CCCCcchh
Confidence 3566654
No 38
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=95.48 E-value=0.0035 Score=50.87 Aligned_cols=72 Identities=15% Similarity=0.391 Sum_probs=53.5
Q ss_pred hhHhhhcC-----ccc-ccCCCCCCccchhhhHHHHhhCCCCCCc--CccCccCHHHHHHHHHHHHHHhCCCCC--CCCC
Q psy7483 157 IKDRMLSW-----NVQ-IDNFSTSWNDGMAFCALIHHFYPHAFDF--DKLSPQQRRHNFELAFRVAEEEADLMP--LLDV 226 (230)
Q Consensus 157 aK~aLL~W-----~v~-ItNFSsSWrDG~ALCALIH~~rPdLIDy--dsL~~~~~~eNlelAFdvAE~eLGIp~--LLdp 226 (230)
.++.+..| +.. -.+|-..-+||..||-|++.+.|+.+.- .+-..-...+|+..-+..++ .+|++. +.++
T Consensus 18 ~~~e~~~WIe~~l~~~i~~~l~~~L~DGvvLCkL~N~l~P~~v~kin~~~~~f~~~eNI~~FL~a~~-~~Gv~~~~lF~~ 96 (146)
T 1wyn_A 18 KEAELRTWIEGLTGLSIGPDFQKGLKDGTILCTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMV-SYGMNPVDLFEA 96 (146)
T ss_dssp HHHHHHHHHHHHHCCCCCSCHHHHHHTTSHHHHHHHHHCTTSCSCCCCSSCHHHHHHHHHHHHHHHH-HHTCCSSSCCCH
T ss_pred HHHHHHHHHHHHhCCCCcHHHHHHHccHHHHHHHHHHhCCCCccccccccccccHHHHHHHHHHHHH-HcCCCcccccCh
Confidence 45789999 333 3577777899999999999999998831 11123457899999999996 799996 4455
Q ss_pred CCC
Q psy7483 227 EDI 229 (230)
Q Consensus 227 EDm 229 (230)
.|+
T Consensus 97 ~DL 99 (146)
T 1wyn_A 97 NDL 99 (146)
T ss_dssp HHH
T ss_pred hHH
Confidence 443
No 39
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=95.47 E-value=0.0062 Score=52.10 Aligned_cols=72 Identities=17% Similarity=0.335 Sum_probs=54.7
Q ss_pred hhHhhhcC-----ccc---ccCCCCCCccchhhhHHHHhhCCCCCC-c--CccCccCHHHHHHHHHHHHHHhCCCCCC--
Q psy7483 157 IKDRMLSW-----NVQ---IDNFSTSWNDGMAFCALIHHFYPHAFD-F--DKLSPQQRRHNFELAFRVAEEEADLMPL-- 223 (230)
Q Consensus 157 aK~aLL~W-----~v~---ItNFSsSWrDG~ALCALIH~~rPdLID-y--dsL~~~~~~eNlelAFdvAE~eLGIp~L-- 223 (230)
..+.+..| +.. ..||-..-+||..||-|++.+.|+.|. + .+...-...+|+...++.++ ++|++..
T Consensus 56 ~~~e~~~WIe~~l~~~l~~~~~f~~~LrDGvvLCkLiN~l~P~sv~kI~~~s~~~f~~~eNI~~FL~ac~-~~Gvp~~~l 134 (203)
T 1p5s_A 56 RVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKFLDFIH-GIGLPEIFH 134 (203)
T ss_dssp HHHHHHHHHHHHHTSCCCCGGGHHHHHTTSHHHHHHHHHHCTTSCCCCCCCSSSCCCHHHHHHHHHHHHH-HTTCCGGGC
T ss_pred HHHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCCCcccccCCCCCcchHHHHHHHHHHHHH-HcCCCcccc
Confidence 45778889 333 247888899999999999999999883 1 22335678999999999996 8999973
Q ss_pred CCCCCC
Q psy7483 224 LDVEDI 229 (230)
Q Consensus 224 LdpEDm 229 (230)
.++.|+
T Consensus 135 F~t~DL 140 (203)
T 1p5s_A 135 FELTDI 140 (203)
T ss_dssp CCHHHH
T ss_pred cCHHHH
Confidence 455553
No 40
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=95.38 E-value=0.0044 Score=52.72 Aligned_cols=71 Identities=14% Similarity=0.257 Sum_probs=53.6
Q ss_pred hhHhhhcC-----cccc---cCCCCCCccchhhhHHHHhhCCCCCCcCcc------------CccCHHHHHHHHHHHHHH
Q psy7483 157 IKDRMLSW-----NVQI---DNFSTSWNDGMAFCALIHHFYPHAFDFDKL------------SPQQRRHNFELAFRVAEE 216 (230)
Q Consensus 157 aK~aLL~W-----~v~I---tNFSsSWrDG~ALCALIH~~rPdLIDydsL------------~~~~~~eNlelAFdvAE~ 216 (230)
..+.+..| +..+ .||-..-+||..||-|++.+.|+.++...+ ..-...+|+..-+..++
T Consensus 48 ~~~e~~~WIe~~lg~~l~~~~~l~~~LrdGvvLCkL~N~l~Pg~vp~kkI~~~~~~~~~~~~~~F~~~eNI~~FL~ac~- 126 (193)
T 3i6x_A 48 HLEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMD- 126 (193)
T ss_dssp HHHHHHHHHHHHHSSCCCCGGGHHHHHTTSHHHHHHHHHHCTTTCCGGGSTTTTCHHHHHSCCCGGGHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhCCCCCChHHHHHHhccHHHHHHHHHHHCCCCCCccccCCcccccccCcccchHHHHHHHHHHHHHH-
Confidence 34578889 4333 378888899999999999999999864433 13456899999999985
Q ss_pred hCCCCC--CCCCCC
Q psy7483 217 EADLMP--LLDVED 228 (230)
Q Consensus 217 eLGIp~--LLdpED 228 (230)
++|+|. +.++.|
T Consensus 127 ~~Gvp~~~lFet~D 140 (193)
T 3i6x_A 127 EIGLPKIFYPETTD 140 (193)
T ss_dssp HHTCCGGGCCCHHH
T ss_pred HcCCCcccCCCcHH
Confidence 799996 445544
No 41
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.29 E-value=0.0093 Score=47.96 Aligned_cols=46 Identities=17% Similarity=0.522 Sum_probs=38.8
Q ss_pred hhHhhhcC------cccccCCCCCCccchhhhHHHHhhCCCCCCcCccCccC
Q psy7483 157 IKDRMLSW------NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLSPQQ 202 (230)
Q Consensus 157 aK~aLL~W------~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~~~~ 202 (230)
....|++| ...++|+..+|.||..+..|+++|.|.++|+....+.+
T Consensus 16 e~~el~~WL~~l~Ls~~~rn~rRDFSdG~lvAEIl~~y~Pk~Vdlh~y~~~~ 67 (127)
T 2ee7_A 16 ALHQLYLWVDNIPLSRPKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNYVPAN 67 (127)
T ss_dssp HHHHHHHHHHHSCCSCCSSCHHHHHTTSHHHHHHHHHHCTTTCCCSSCCCCS
T ss_pred HHHHHHHHHHcCCCCCCCCchhhhccchhHHHHHHHHHCcCcccccccCCCC
Confidence 45789999 55678899999999999999999999999877776533
No 42
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=95.15 E-value=0.0044 Score=52.31 Aligned_cols=71 Identities=15% Similarity=0.286 Sum_probs=53.5
Q ss_pred hHhhhcC-----cccc---cCCCCCCccchhhhHHHHhhCCCCCCcCcc------------CccCHHHHHHHHHHHHHHh
Q psy7483 158 KDRMLSW-----NVQI---DNFSTSWNDGMAFCALIHHFYPHAFDFDKL------------SPQQRRHNFELAFRVAEEE 217 (230)
Q Consensus 158 K~aLL~W-----~v~I---tNFSsSWrDG~ALCALIH~~rPdLIDydsL------------~~~~~~eNlelAFdvAE~e 217 (230)
.+.+..| +..+ .+|-..-+||..||-|++.+.|+.++...+ ..-...+|+..-+..++ .
T Consensus 27 ~~e~~~WIe~~lg~~lp~~~~f~~~LrDGvvLCkL~N~l~P~sv~~~kI~~~~~~~~~~~~~~f~~~eNI~~FL~ac~-~ 105 (190)
T 2rr8_A 27 LEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMD-E 105 (190)
T ss_dssp HHHHHHHHHHHSCCCCCCHHHHHHHHSSHHHHHHHHHHSCTTTSCSSCSSTTTCHHHHHTCCCSSTHHHHHHHHHGGG-G
T ss_pred HHHHHHHHHHHhCCCCCChhHHHHHHcchhhHHHHHHHhCCCCcccccccccccccccCCCCcchHHHHHHHHHHHHH-H
Confidence 3788899 4343 468888999999999999999999864332 13456799999999985 6
Q ss_pred CCCCC--CCCCCCC
Q psy7483 218 ADLMP--LLDVEDI 229 (230)
Q Consensus 218 LGIp~--LLdpEDm 229 (230)
+|+|. +.++.|+
T Consensus 106 ~Gvp~~~lFet~DL 119 (190)
T 2rr8_A 106 IGLPKIFYPETTDI 119 (190)
T ss_dssp TTCCSTTCCCHHHH
T ss_pred cCCCccccCCHHHH
Confidence 99996 3344443
No 43
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=94.99 E-value=0.03 Score=47.96 Aligned_cols=73 Identities=15% Similarity=0.261 Sum_probs=55.3
Q ss_pred chhHhhhcC------c-------ccccCCCCCCccchhhhHHHHhhCCCCCCcCc-cCccCHHHHHHHHHHHHHHhCCCC
Q psy7483 156 SIKDRMLSW------N-------VQIDNFSTSWNDGMAFCALIHHFYPHAFDFDK-LSPQQRRHNFELAFRVAEEEADLM 221 (230)
Q Consensus 156 saK~aLL~W------~-------v~ItNFSsSWrDG~ALCALIH~~rPdLIDyds-L~~~~~~eNlelAFdvAE~eLGIp 221 (230)
..++.+.+| . ..|.||-.+.+||..||.|+....|+.++... .......+|+..|++.++ ..|+.
T Consensus 12 ~q~~~f~~WiN~~L~~~~~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~eNv~~aL~~~k-~~g~~ 90 (245)
T 1sh5_A 12 VQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMRFHKLQNVQIALDYLR-HRQVK 90 (245)
T ss_dssp HHHHHHHHHHHHHHTTCSSGGGCCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCCCCCSHHHHHHHHHHHHHHHH-HTTCC
T ss_pred HHHHHHHHHHHHhccccccccCCCCccchHhhccCHHHHHHHHHHhcCccccCCCCcchHHHHHhHHHHHHHHH-HcCCc
Confidence 355777888 2 36899999999999999999999999886422 224567899999999996 57876
Q ss_pred C-CCCCCCC
Q psy7483 222 P-LLDVEDI 229 (230)
Q Consensus 222 ~-LLdpEDm 229 (230)
- -+.++|+
T Consensus 91 l~~I~~~DI 99 (245)
T 1sh5_A 91 LVNIRNDDI 99 (245)
T ss_dssp CCSCCHHHH
T ss_pred ccCCChHhh
Confidence 3 2455554
No 44
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=94.73 E-value=0.0074 Score=49.34 Aligned_cols=71 Identities=18% Similarity=0.451 Sum_probs=51.9
Q ss_pred hhHhhhcC-----cccc-------cCCCCCCccchhhhHHHHhhCC---CCCCc-C-ccCccCHHHHHHHHHHHHHHhCC
Q psy7483 157 IKDRMLSW-----NVQI-------DNFSTSWNDGMAFCALIHHFYP---HAFDF-D-KLSPQQRRHNFELAFRVAEEEAD 219 (230)
Q Consensus 157 aK~aLL~W-----~v~I-------tNFSsSWrDG~ALCALIH~~rP---dLIDy-d-sL~~~~~~eNlelAFdvAE~eLG 219 (230)
..+.+..| +..+ .+|-..-+||..||-|++.+.| +.|+- . +-..-...+|+..-+..++ .+|
T Consensus 18 ~e~e~~~WIe~~l~~~l~~~~~~~~~~~~~LkDGvvLCkL~N~l~P~~~~~i~kIn~~~~~F~~~eNI~~FL~ac~-~~G 96 (155)
T 1wym_A 18 LEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAE-RYG 96 (155)
T ss_dssp HHHHHHHHHHHHSSSCCCCCCSSHHHHHHHHHTSHHHHHHHHHHSCTTTCSCCCCCCCCCHHHHHHHHHHHHHHHH-HHT
T ss_pred HHHHHHHHHHHHhCCCCCCCcccHHHHHHHHcchHHHHHHHHHhccccCCCcCcccCCCccccHHHHHHHHHHHHH-HcC
Confidence 35788999 3332 3677789999999999999999 88752 1 1123457789999999996 699
Q ss_pred CCC--CCCCCC
Q psy7483 220 LMP--LLDVED 228 (230)
Q Consensus 220 Ip~--LLdpED 228 (230)
++. +.++.|
T Consensus 97 v~~~~lF~t~D 107 (155)
T 1wym_A 97 INTTDIFQTVD 107 (155)
T ss_dssp CCTTTCCCHHH
T ss_pred CCccccCChHH
Confidence 997 334444
No 45
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=94.69 E-value=0.027 Score=44.78 Aligned_cols=73 Identities=19% Similarity=0.399 Sum_probs=51.4
Q ss_pred chhHhhhcC-----ccc--------ccCC-CCCCccchhhhHHHHhhCCCCCCcC---ccCccCHHHHHHHHHHHHHHhC
Q psy7483 156 SIKDRMLSW-----NVQ--------IDNF-STSWNDGMAFCALIHHFYPHAFDFD---KLSPQQRRHNFELAFRVAEEEA 218 (230)
Q Consensus 156 saK~aLL~W-----~v~--------ItNF-SsSWrDG~ALCALIH~~rPdLIDyd---sL~~~~~~eNlelAFdvAE~eL 218 (230)
..++.+..| +++ ..+| ...-+||..||-|++.+.|+.|+-- ....-...+|+..-++.+++.+
T Consensus 12 ~~~~e~~~WI~~~~~L~~~~~~~~~~~~~l~~~LkdGvvLCkLiN~l~Pg~i~kI~~~~~~~f~~~eNI~~FL~a~~~~~ 91 (126)
T 2l3g_A 12 NSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSESECLSNIREFLRGCGASL 91 (126)
T ss_dssp CHHHHHHHHHHHTTSSCCCSSCCSCHHHHHHHHHTTSHHHHHHHHHHSTTCCSCCCSSCCSHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCccccCCCCCChhhHHHHHHccHHHHHHHHHHhCCCCCCccCCCCCcchHHHHHHHHHHHHHHHhC
Confidence 456778888 211 2245 4677999999999999999999621 1113456899999999997558
Q ss_pred CCCCCCCCCCC
Q psy7483 219 DLMPLLDVEDI 229 (230)
Q Consensus 219 GIp~LLdpEDm 229 (230)
|+ .+.++.|+
T Consensus 92 g~-~lF~t~DL 101 (126)
T 2l3g_A 92 RL-ETFDANDL 101 (126)
T ss_dssp CC-CCCCHHHH
T ss_pred CC-CccCHHHH
Confidence 87 55566553
No 46
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=94.28 E-value=0.032 Score=43.85 Aligned_cols=57 Identities=16% Similarity=0.350 Sum_probs=42.6
Q ss_pred CCCCCccchhhhHHHHhhCCCCCCcC---ccCccCHHHHHHHHHHHHHHhCCCCCCCCCCCC
Q psy7483 171 FSTSWNDGMAFCALIHHFYPHAFDFD---KLSPQQRRHNFELAFRVAEEEADLMPLLDVEDI 229 (230)
Q Consensus 171 FSsSWrDG~ALCALIH~~rPdLIDyd---sL~~~~~~eNlelAFdvAE~eLGIp~LLdpEDm 229 (230)
|-..-+||..||-|++.+.|+.|+.- ....-...+|+...++.++ .+|+ .+.++.|+
T Consensus 35 l~~~L~dGvvLCkL~N~l~Pg~i~ki~~~~~~~f~~~eNI~~FL~a~~-~~g~-~~F~~~DL 94 (121)
T 1wyr_A 35 LKSSLKNGVVLCKLINRLMPGSVEKFCLDPQTEADCINNINDFLKGCA-TLQV-EIFDPDDL 94 (121)
T ss_dssp HHHHHHHSHHHHHHHHHHSTTCCSCCCSSCCSHHHHHHHHHHHHHHHH-HHTC-CCCCHHHH
T ss_pred HHHHHccHHHHHHHHHHhCCCCCCcCCCCCcchHHHHHHHHHHHHHHH-HcCC-CccCHHHH
Confidence 35667999999999999999998621 1112458899999999996 5787 55566553
No 47
>2r8u_A Microtubule-associated protein RP/EB family member 1; cytoskeleton, acetylation, cell cycle, cell division, cytoplasm, mitosis, phosphorylation; 1.35A {Homo sapiens} SCOP: a.40.1.1 PDB: 1vka_A 1txq_B 1wu9_A 2hkq_A 2hl5_A 3tq7_A 3gjo_A 1yib_A 1yig_A
Probab=93.01 E-value=0.08 Score=47.51 Aligned_cols=73 Identities=15% Similarity=0.435 Sum_probs=51.7
Q ss_pred chhHhhhcC-----cccccCCCCCCccchhhhHHHHhhCCCCCCcCccC-----ccCHHHHHHHHHHHHHHhCCCCCCCC
Q psy7483 156 SIKDRMLSW-----NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS-----PQQRRHNFELAFRVAEEEADLMPLLD 225 (230)
Q Consensus 156 saK~aLL~W-----~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~-----~~~~~eNlelAFdvAE~eLGIp~LLd 225 (230)
..+..||.| +++++-. ..-.+|-|+|-|++...|+.|++..+. .-+-.+|+++--++. .++||.+.++
T Consensus 15 ~sR~elL~WiN~~L~~~~~ki-Eel~tGaayCQlmd~l~P~~i~l~kVkf~a~~e~e~i~N~k~LQ~~F-~k~~I~k~ip 92 (268)
T 2r8u_A 15 LSRHDMLAWINESLQLNLTKI-EQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGF-KRMGVDKIIP 92 (268)
T ss_dssp CCHHHHHHHHHHHHTCCCCCG-GGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHH-HHTTCCCCCC
T ss_pred cCHHHHHHHHHHHhcCCcchH-HHcccchHHHHHHHHHccCCCchhhccCCCCCHHHHHHHHHHHHHHH-HHcCCCCccC
Confidence 456889999 4443333 234779999999999999999877764 234556665544444 4799999998
Q ss_pred CCCCC
Q psy7483 226 VEDIH 230 (230)
Q Consensus 226 pEDmv 230 (230)
++.++
T Consensus 93 V~kLv 97 (268)
T 2r8u_A 93 VDKLV 97 (268)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77653
No 48
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=92.96 E-value=0.022 Score=52.87 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=29.1
Q ss_pred cccCCCccccccccCCCCCCCCcccccchhh
Q psy7483 98 QTASTHRLTKANSVQVPSTPASPFAKFKQLE 128 (230)
Q Consensus 98 t~Dp~TRYpnlN~~~V~p~qV~hL~d~d~le 128 (230)
++|+.+||||++..++++.+++||||..++|
T Consensus 467 ~~~~~~~~p~~~~~~~r~~~~~~l~~~~~~~ 497 (497)
T 2bry_A 467 GLDPATRYPNLNLRAVTPNQVQDLYDMMDKE 497 (497)
T ss_dssp CSSGGGTSSSCCTTSSCGGGGGGGEEECSCC
T ss_pred cCCCcCcCCCcccccccCCccCccccccCCC
Confidence 8999999999999999999999999988754
No 49
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=90.13 E-value=0.18 Score=41.68 Aligned_cols=71 Identities=15% Similarity=0.366 Sum_probs=48.6
Q ss_pred hhHhhhcC-----cccccCCCCCCccchhhhHHHHhhCCCCCCcCccC-----ccCHHHHHHHHHHHHHHhCCCCCCCCC
Q psy7483 157 IKDRMLSW-----NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS-----PQQRRHNFELAFRVAEEEADLMPLLDV 226 (230)
Q Consensus 157 aK~aLL~W-----~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~-----~~~~~eNlelAFdvAE~eLGIp~LLdp 226 (230)
.+..||.| ..+++.. ..-.+|-|+|-|++...++ |++..+. .-+-.+|+++--+.. +++||++.++.
T Consensus 7 SR~eLL~WiN~~L~~n~tkI-E~l~sGAaYCQlmD~lfg~-i~l~kVkf~a~~e~e~i~NfKlLQ~~F-~k~~I~k~ipV 83 (145)
T 4abo_I 7 SRQELLAWINQVTSLGLTRI-EDCGKGYAMIQIFDSIYQD-IPLKKVNFECNNEYQYINNWKVLQQVF-LKKGIDKVVDP 83 (145)
T ss_dssp CHHHHHHHHHHHHTCCCCSG-GGGGGSHHHHHHHHHHHCC-SCTTTSCSSCCSHHHHHHHHHHHHHHH-HHHTCCCCCCH
T ss_pred cHHHHHHHHHHHcCCCcchH-HHccccHHHHHHHHHHhcC-cchhhcccCCCCHHHHHHHHHHHHHHH-HHcCCCCccCH
Confidence 56789999 3333332 3357899999999998854 6665554 455666666544444 47899999988
Q ss_pred CCCC
Q psy7483 227 EDIH 230 (230)
Q Consensus 227 EDmv 230 (230)
+.++
T Consensus 84 ~kLv 87 (145)
T 4abo_I 84 ERLS 87 (145)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 7653
No 50
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=90.02 E-value=0.11 Score=49.50 Aligned_cols=56 Identities=20% Similarity=0.390 Sum_probs=44.9
Q ss_pred cccCCCCCCccchhhhHHHHhhCCCCCCcCccC------ccCHHHHHHHHHHHHHHhCCCCC
Q psy7483 167 QIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS------PQQRRHNFELAFRVAEEEADLMP 222 (230)
Q Consensus 167 ~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~------~~~~~eNlelAFdvAE~eLGIp~ 222 (230)
.+.||....+||..||-|++.+.|+.+++..+. .-...+|+..=+..+.+++|+|.
T Consensus 32 ~~~~l~~~L~~G~~Lc~l~n~l~p~~v~~~~~~~~~~~~~f~~~~ni~~Fl~~~~~~~g~~~ 93 (587)
T 3ky9_A 32 QVCELAQALRDGVLLCQLLNNLLPHAINLREVNLRPQMSQFLCLKNIRTFLSTCCEKFGLKR 93 (587)
T ss_dssp CHHHHHHHHSSTHHHHHHHHHHSTTSSCGGGSCSSCTTBHHHHHHHHHHHHHHHHHTTCCCT
T ss_pred ChhhHHHHhCcHHHHHHHHHHhCCCCCCccccCCCccccchHHHHHHHHHHHHHHHHcCCCH
Confidence 357888888999999999999999999655443 24457888887787757899995
No 51
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=89.05 E-value=0.3 Score=39.30 Aligned_cols=72 Identities=13% Similarity=0.409 Sum_probs=47.8
Q ss_pred chhHhhhcC-----cccccCCCCCCccchhhhHHHHhhCCCCCCcCccC-----ccCHHHHHHHHHHHHHHhCCCCCCCC
Q psy7483 156 SIKDRMLSW-----NVQIDNFSTSWNDGMAFCALIHHFYPHAFDFDKLS-----PQQRRHNFELAFRVAEEEADLMPLLD 225 (230)
Q Consensus 156 saK~aLL~W-----~v~ItNFSsSWrDG~ALCALIH~~rPdLIDydsL~-----~~~~~eNlelAFdvAE~eLGIp~LLd 225 (230)
..+..||.| ..+++-.-. -.+|-|.|-|++...|+ +.+..+. .-+-..|++.--+.. .++||++.++
T Consensus 10 ~sR~elL~WiN~~L~~n~~kiEe-l~tGaayCQl~d~l~g~-v~l~kVkf~a~~e~e~~~N~k~LQ~~f-~k~~I~k~ip 86 (127)
T 2qjx_A 10 ESRTELLTWLNGLLNLNYKKIEE-CGTGAAYCQIMDSIYGD-LPMNRVKFNATAEYEFQTNYKILQSCF-SRHGIEKTVY 86 (127)
T ss_dssp -CHHHHHHHHHHHHTCCCCSGGG-GGGSHHHHHHHHHHHCC-SCGGGSCTTCCSHHHHHHHHHHHHHHH-HHTTCCCCCC
T ss_pred cCHHHHHHHHHHHHcCCccHHHH-ccchHHHHHHHhhhccc-cCccccCCCCCCHHHHHHHHHHHHHHH-HHcCCCCccC
Confidence 356889999 344333322 27899999999999977 6555543 334446666544444 5799999988
Q ss_pred CCCCC
Q psy7483 226 VEDIH 230 (230)
Q Consensus 226 pEDmv 230 (230)
.+.++
T Consensus 87 V~kLv 91 (127)
T 2qjx_A 87 VDKLI 91 (127)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77653
No 52
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=58.64 E-value=5.1 Score=32.81 Aligned_cols=61 Identities=10% Similarity=0.268 Sum_probs=40.7
Q ss_pred cchhHhhhcC--c----ccccCCCCCCccchhhhHHHHhhCCCCCCc---CccC------ccCHHHHHHHHHHHHHH
Q psy7483 155 SSIKDRMLSW--N----VQIDNFSTSWNDGMAFCALIHHFYPHAFDF---DKLS------PQQRRHNFELAFRVAEE 216 (230)
Q Consensus 155 ~saK~aLL~W--~----v~ItNFSsSWrDG~ALCALIH~~rPdLIDy---dsL~------~~~~~eNlelAFdvAE~ 216 (230)
.....+|+.| . -++.+| .+-.||.+|.-++|...|+.|+- ..+. ..-+..|++..++...+
T Consensus 8 ~~~~~aLl~W~~tf~~~~~~~~~-~dL~DG~~L~~iL~~IDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l~~~i~~ 83 (164)
T 1wix_A 8 LPLCDSLIIWLQTFKTASPCQDV-KQLTNGVTMAQVLHQIDVAWFSESWLSRIKDDVGDNWRIKASNLKKVLHGITS 83 (164)
T ss_dssp CHHHHHHHHHHTTCCCSSCCCSH-HHHTTSHHHHHHHHHHCTTTSCHHHHTTCCSGGGGCSHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCcCcH-HHhccHHHHHHHHHHhCccccCchHhhhhcccCcccHHHHHHHHHHHHHHHHH
Confidence 4567899999 2 233443 44689999999999999998862 2221 11256788777665433
Done!